BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010057
(519 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225430854|ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Vitis vinifera]
Length = 519
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/518 (66%), Positives = 413/518 (79%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
MRDTI N+ KIL+Y TWDSAQ+ L+ L I+WDSYTVNQVLK+HPPMEKAWLFFNW SR +
Sbjct: 1 MRDTIGNISKILRYLTWDSAQEQLEKLSIRWDSYTVNQVLKSHPPMEKAWLFFNWASRLK 60
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF HD+FTYTTMLDIFGEA+RI SM YVF+ MQEKGI DAVTYTS+MHW SN GD++ A
Sbjct: 61 GFKHDQFTYTTMLDIFGEARRIESMNYVFQQMQEKGIKTDAVTYTSLMHWFSNDGDIERA 120
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V +W+EMK K C T+VSYTAYMKILF N RVKEA DVYKEM+Q G PNCYTYTVLME+
Sbjct: 121 VRVWKEMKAKGCCLTVVSYTAYMKILFDNKRVKEAADVYKEMLQSGCAPNCYTYTVLMEH 180
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +GKY+ ALEIFS+MQEAGVQPDKA CNILIEK CK G+T I IL YMK+N L LR
Sbjct: 181 LTGSGKYKAALEIFSRMQEAGVQPDKATCNILIEKFCKTGQTWAITQILLYMKDNFLVLR 240
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
YPV+ EALQT KVA E+D LL QV+P + S + VEF T + +ID+G VL+
Sbjct: 241 YPVYLEALQTLKVAGESDILLRQVNPHLNVGLSSKEEIVEFKETVADVHSTIDRGFVLLF 300
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
L K+N AID LL+G++ K+ +LDS +IS IIEVNC H R +GALLAFEYSVKM +N+ER
Sbjct: 301 LTKQNFYAIDCLLTGMIHKNTRLDSVIISQIIEVNCAHCRINGALLAFEYSVKMGINIER 360
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
AYLAL+G+ I+ N+FPKVA+IVE+M +AG SLG+YLGALLI+RLG ARRP AAK+F L
Sbjct: 361 IAYLALMGVFIRANSFPKVADIVEKMVRAGISLGMYLGALLIYRLGCARRPGSAAKVFGL 420
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
LP+DQK TA YTALI YFS+G+ DK LKIYKTM RK IHP+LGT+N+LLAGLEK GR
Sbjct: 421 LPDDQKGTAAYTALISAYFSSGNVDKGLKIYKTMQRKRIHPALGTYNLLLAGLEKKGRAR 480
Query: 481 DAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGDGV 518
+AEIYRKEKK++ S+D V M+EKIC+LL+ G+ V
Sbjct: 481 EAEIYRKEKKTLHTHGHSQDIVSMDEKICNLLFSGNLV 518
>gi|297735213|emb|CBI17575.3| unnamed protein product [Vitis vinifera]
Length = 656
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/529 (65%), Positives = 413/529 (78%), Gaps = 11/529 (2%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
MRDTI N+ KIL+Y TWDSAQ+ L+ L I+WDSYTVNQVLK+HPPMEKAWLFFNW SR +
Sbjct: 127 MRDTIGNISKILRYLTWDSAQEQLEKLSIRWDSYTVNQVLKSHPPMEKAWLFFNWASRLK 186
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF HD+FTYTTMLDIFGEA+RI SM YVF+ MQEKGI DAVTYTS+MHW SN GD++ A
Sbjct: 187 GFKHDQFTYTTMLDIFGEARRIESMNYVFQQMQEKGIKTDAVTYTSLMHWFSNDGDIERA 246
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V +W+EMK K C T+VSYTAYMKILF N RVKEA DVYKEM+Q G PNCYTYTVLME+
Sbjct: 247 VRVWKEMKAKGCCLTVVSYTAYMKILFDNKRVKEAADVYKEMLQSGCAPNCYTYTVLMEH 306
Query: 181 LVRAGK-----------YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
L +GK Y+ ALEIFS+MQEAGVQPDKA CNILIEK CK G+T I IL
Sbjct: 307 LTGSGKHLLQFSCIACKYKAALEIFSRMQEAGVQPDKATCNILIEKFCKTGQTWAITQIL 366
Query: 230 RYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
YMK+N L LRYPV+ EALQT KVA E+D LL QV+P + S + VEF T +
Sbjct: 367 LYMKDNFLVLRYPVYLEALQTLKVAGESDILLRQVNPHLNVGLSSKEEIVEFKETVADVH 426
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
+ID+G VL+ L K+N AID LL+G++ K+ +LDS +IS IIEVNC H R +GALLAFE
Sbjct: 427 STIDRGFVLLFLTKQNFYAIDCLLTGMIHKNTRLDSVIISQIIEVNCAHCRINGALLAFE 486
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
YSVKM +N+ER AYLAL+G+ I+ N+FPKVA+IVE+M +AG SLG+YLGALLI+RLG AR
Sbjct: 487 YSVKMGINIERIAYLALMGVFIRANSFPKVADIVEKMVRAGISLGMYLGALLIYRLGCAR 546
Query: 410 RPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
RP AAK+F LLP+DQK TA YTALI YFS+G+ DK LKIYKTM RK IHP+LGT+N+L
Sbjct: 547 RPGSAAKVFGLLPDDQKGTAAYTALISAYFSSGNVDKGLKIYKTMQRKRIHPALGTYNLL 606
Query: 470 LAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGDGV 518
LAGLEK GR +AEIYRKEKK++ S+D V M+EKIC+LL+ G+ V
Sbjct: 607 LAGLEKKGRAREAEIYRKEKKTLHTHGHSQDIVSMDEKICNLLFSGNLV 655
>gi|356511257|ref|XP_003524343.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Glycine max]
Length = 585
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/521 (61%), Positives = 414/521 (79%), Gaps = 2/521 (0%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
MR+ I +Y +LKYS+W+SA+ L NL +KWDSYTVNQVLK+HPPMEKAWLFFNWVS R
Sbjct: 65 MRNVIGKIYNMLKYSSWESAEQDLNNLSMKWDSYTVNQVLKSHPPMEKAWLFFNWVSSLR 124
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF HD +TYTTMLDIFGEA R+SSMK++F+ MQEKGI +D+VTYTS+MHWLS++G+ D A
Sbjct: 125 GFKHDHYTYTTMLDIFGEAGRVSSMKHLFQQMQEKGIKLDSVTYTSMMHWLSSSGNFDEA 184
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +W++MK K +PT+VSYTAY+KILF N RVKEAT YKEMI + PNC+TYTVLM+Y
Sbjct: 185 MQMWDQMKSKGFHPTVVSYTAYIKILFHNQRVKEATRAYKEMISSRVAPNCHTYTVLMDY 244
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L+ +G+Y+EALEIF KMQEAG QPDKAACNILIE+C K G T + IL+YMKENRL LR
Sbjct: 245 LIGSGQYKEALEIFEKMQEAGAQPDKAACNILIERCSKVGGTEFMTHILQYMKENRLVLR 304
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
YPVF +AL+ K+A E+D+LL QV+PQF + I A +T + P +ID+ L+ +L
Sbjct: 305 YPVFVKALEALKIAGESDTLLRQVNPQFYMDCIIRKKASNTITVAADCPTNIDKELLFVL 364
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
LK +N+VAID LL+G+MDK I LD V+STIIEVNC H R +GALLAF+YSV M +++ER
Sbjct: 365 LKNRNVVAIDHLLTGMMDKKISLDHKVVSTIIEVNCSHCRPEGALLAFKYSVTMGISIER 424
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
T YL+LIG+LI+ N F K+AEIVE+MT+AGHSLG+YL +LLI RLG AR+ A KIF+L
Sbjct: 425 TGYLSLIGLLIRSNMFSKLAEIVEKMTRAGHSLGIYLASLLIFRLGCARKHTLAMKIFNL 484
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
LP++ KC+ATYTALI VYFS ++AL+IYK MC KG P LGT++VL+AGLE+ G+ +
Sbjct: 485 LPDNHKCSATYTALISVYFSVRRVNEALEIYKIMCSKGFCPVLGTYDVLIAGLERNGKYA 544
Query: 481 DAEIYRKEK--KSIQADALSKDAVPMEEKICDLLYGGDGVL 519
+AE YRK K KS++A++ S+++V +E KIC+LL+ D VL
Sbjct: 545 EAEHYRKAKKRKSLRANSGSQESVCIEGKICNLLFSVDVVL 585
>gi|255568239|ref|XP_002525094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535553|gb|EEF37221.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 472
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/473 (67%), Positives = 388/473 (82%), Gaps = 2/473 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEKAW+FFNWVS +GF HD+FTYTTMLDIFGEA RI SM YVF+ MQEK I ID VTYT
Sbjct: 1 MEKAWIFFNWVSGFQGFKHDQFTYTTMLDIFGEAGRIESMNYVFKQMQEKDIKIDTVTYT 60
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+MHWLS GDVDGA+ IWEEMK K Y T+VSYTA+MKILF N RVKEAT++YKEM++
Sbjct: 61 SLMHWLSRNGDVDGAIKIWEEMKEKGLYLTVVSYTAFMKILFDNKRVKEATNIYKEMLEC 120
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+PPNC+TYTVLMEYLV +GK +EALEIF KMQEAGVQPDKA CNIL+E+CC+AGET T+
Sbjct: 121 GIPPNCHTYTVLMEYLVVSGKCQEALEIFKKMQEAGVQPDKAMCNILVERCCEAGETNTM 180
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
IL+YMKEN LALRYP+F EAL+ ++A E D+LL QV+P + E I+++D+ EF T+
Sbjct: 181 TPILQYMKENHLALRYPIFLEALKILRIAGECDALLKQVNPHCAAESINNDDSSEFTTSA 240
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
P ID+GL+LILL+K+NLVA+D LL+G++DK++ L+S ++STIIEVNC R D AL
Sbjct: 241 YNDP--IDKGLLLILLRKQNLVAVDHLLAGVLDKNMVLESWIVSTIIEVNCSQCRPDSAL 298
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+AFEYS+++ ++LERTAYLALIGI+I+ NT V EIV+E + GHSLG+YL ALLIHRL
Sbjct: 299 MAFEYSMRVGIDLERTAYLALIGIMIRSNTSLWVLEIVKETIRVGHSLGLYLSALLIHRL 358
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
GSARRP AAKIF LLP++QKCTATYTA+IGVYFSAGSA KALKIYKTM + I+PSLGT
Sbjct: 359 GSARRPNCAAKIFDLLPDEQKCTATYTAMIGVYFSAGSAAKALKIYKTMKKNSINPSLGT 418
Query: 466 FNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGDGV 518
+NVLLAGLEK GRV + + +RKEK+S+ AD +PMEEKICDLL+ G V
Sbjct: 419 YNVLLAGLEKSGRVCETDNFRKEKRSLMADGNRLSCLPMEEKICDLLFAGSLV 471
>gi|357521641|ref|XP_003631109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525131|gb|AET05585.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 687
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/520 (61%), Positives = 409/520 (78%), Gaps = 1/520 (0%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
MR+ I N+Y+ LKYS+WDSAQ L+NLP+KWDSYTVNQVLK+HPPMEKAWLFFNW SR +
Sbjct: 168 MRNVIGNIYRTLKYSSWDSAQQQLQNLPLKWDSYTVNQVLKSHPPMEKAWLFFNWASRLK 227
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF HD+FTYTTMLDIFGEA RISSMK+VF M EKGI ID+VTYTS+MHWLS +G+VD A
Sbjct: 228 GFKHDQFTYTTMLDIFGEAGRISSMKHVFNQMHEKGIKIDSVTYTSMMHWLSTSGNVDEA 287
Query: 121 VNIWEEMKLKEC-YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +W+EMK K C YPT+VSYTA++KILF N RVKEAT +YKEM+ G PNCYTYTVLM+
Sbjct: 288 IALWDEMKSKGCCYPTVVSYTAFIKILFDNHRVKEATAIYKEMLHNGCVPNCYTYTVLMD 347
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+L+ +GK +EALEIF KMQEAGV+PDKAACNILI+KC K T + IL+YMKENRL L
Sbjct: 348 HLIASGKCKEALEIFQKMQEAGVEPDKAACNILIDKCSKVCGTVFMTKILQYMKENRLVL 407
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
RY V+ +A++ K+A E+D+LL QV+P F + A + T + +ID+ L+L+
Sbjct: 408 RYRVYVKAMEALKIAGESDTLLRQVNPHFYLDSSFKEKAHDRNTVIADSSSNIDKELLLV 467
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
LL+ +N+VAID L+ G+MDK I +D+ VISTIIEVNC+ R DGALLAF YSV M +++E
Sbjct: 468 LLRNRNVVAIDHLIQGMMDKKISVDNKVISTIIEVNCNCCRPDGALLAFNYSVTMGISIE 527
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
RT YL+L+G+L + N F K+ EIV EMT+AGHSLG+YL +LLI+RLG AR+ A KIF+
Sbjct: 528 RTGYLSLVGLLNRSNMFSKLVEIVGEMTRAGHSLGIYLASLLIYRLGCARQLSIALKIFN 587
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
LLP++ KC ATYTALI +YFSA +KAL+IYK MC+KG P+ GTFN+L+AGLE+ GR
Sbjct: 588 LLPDNHKCVATYTALISIYFSARRVNKALEIYKIMCQKGNCPTSGTFNILVAGLERNGRF 647
Query: 480 SDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGDGVL 519
S+A ++RK KK++ ++ S++ + E +ICDLL+ GD +L
Sbjct: 648 SEAGVHRKAKKNLNSNIGSQENLSTEGRICDLLFAGDVIL 687
>gi|356527892|ref|XP_003532540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g01390-like [Glycine max]
Length = 545
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 307/521 (58%), Positives = 392/521 (75%), Gaps = 18/521 (3%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
MR+ I +YK LKYS+W+SA+ L N+ ++WDSYTVNQVLK+HPPMEKAWLFFNW S R
Sbjct: 41 MRNVIGKIYKTLKYSSWESAEQELNNMSLRWDSYTVNQVLKSHPPMEKAWLFFNWASSLR 100
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF HD +TYTTMLDIFGEA R+SS+K +D+VTYTS+MHWLS++G+VD A
Sbjct: 101 GFKHDHYTYTTMLDIFGEAGRVSSIK------------LDSVTYTSMMHWLSSSGNVDQA 148
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +W ++K K T+VSYTAY+KILF N R+KEAT VYKEMI G+ PNC+TYTVLM+Y
Sbjct: 149 MQMWHQIKSK----TVVSYTAYIKILFHNRRLKEATRVYKEMISSGVAPNCHTYTVLMDY 204
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L+ +GK +EALEIF KMQEAG QPDKAACNILI++C K G T + IL+YMKENRL LR
Sbjct: 205 LIASGKCKEALEIFEKMQEAGAQPDKAACNILIQRCSKVGGTEFMTHILQYMKENRLVLR 264
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
YPVF EAL+ K + E D+LL QV+PQF + + DA +T + P +ID L+ +L
Sbjct: 265 YPVFVEALEALKXSGETDTLLRQVNPQFYMDCSTRKDASNSITVAADCPTNIDNELLFVL 324
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
LK +N+VAID LL+G+MDK I L+ V+STIIEVNC H R GALLAF+YSV M +++ER
Sbjct: 325 LKNRNVVAIDHLLTGMMDKKIYLEHKVVSTIIEVNCSHCRPKGALLAFKYSVTMGISIER 384
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
T YL+LIG+LI+ N F K+ EIVEEMT+AG+SLG YL +LL H LG A++ A KIF+L
Sbjct: 385 TGYLSLIGLLIRSNMFSKLVEIVEEMTRAGYSLGTYLASLLXHXLGCAKKHTLAMKIFNL 444
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
LP++ KCTAT+TALI VYFS KAL+IYK MC KG P LGT++VL+AG E G+ +
Sbjct: 445 LPDNHKCTATFTALISVYFSVRRVTKALEIYKIMCTKGFCPVLGTYDVLIAGFETNGKYA 504
Query: 481 DAEIYRKEK--KSIQADALSKDAVPMEEKICDLLYGGDGVL 519
+AE YRK K KS+ A++ S+++V +E KIC+LL+ D VL
Sbjct: 505 EAEHYRKAKKSKSLHANSGSQESVCIEGKICNLLFSVDVVL 545
>gi|449516876|ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Cucumis sativus]
Length = 737
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 296/514 (57%), Positives = 382/514 (74%), Gaps = 1/514 (0%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
RDT+ N+ IL+ +W SAQ L+ LPI+WDSY +NQVLKTHPP+EK WLFFNW S +
Sbjct: 137 RDTVRNICNILRNCSWASAQKHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASTLQV 196
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F HD++TYTTMLDIFGEA RISSM YVF+ M+EKGI IDAVTYTS+MHW SN+GDVDGA+
Sbjct: 197 FKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVDGAI 256
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+W+EMK C+PT+VSYTAY+KIL N ++ EAT YK+M+Q GL PNC TYT+LMEYL
Sbjct: 257 KVWKEMKANGCHPTVVSYTAYIKILLDNGQINEATATYKKMLQSGLSPNCCTYTILMEYL 316
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ GK +EAL+IFSKMQ+AGV PDKAACNILI+KCCK+GE + IL +MKENR LRY
Sbjct: 317 IGEGKCKEALDIFSKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEFMKENRFVLRY 376
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
PVF EA +T K + +LL QV+P E IS + V+ T P ++D L+ +LL
Sbjct: 377 PVFVEAHETLKSCSVSYALLKQVNPHMEIESISKGEVVDVSTGSNTVPPNVDNELLAMLL 436
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K L A+D +L GI+DK+IQLDS++I +IIEVNC R + ALLAF+Y +K +N++R
Sbjct: 437 KDNKLTAVDHMLIGIVDKNIQLDSSIIYSIIEVNCKSNRPNSALLAFDYCLKNSVNIKRK 496
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
YL LIGILI+ + +PK+ EIV+EM GH LG+Y L+++ LG A +P A K+F++L
Sbjct: 497 LYLDLIGILIRSSIYPKLLEIVQEMYTQGHCLGLYHATLILYSLGKAGKPQYARKVFNML 556
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
PE+ KCTATYTAL+ YFSAGS+ K LKI++TM +KG PSLGT+NVLL GL K GR +
Sbjct: 557 PEELKCTATYTALVDGYFSAGSSGKGLKIFETMRKKGFTPSLGTYNVLLNGLAKNGRGVE 616
Query: 482 AEIYRKEKKSIQADALSK-DAVPMEEKICDLLYG 514
IYR+EKKS + S+ + + +E+ICDLL+G
Sbjct: 617 LNIYRREKKSFEISHHSRLNTILDDERICDLLFG 650
>gi|297814374|ref|XP_002875070.1| hypothetical protein ARALYDRAFT_322482 [Arabidopsis lyrata subsp.
lyrata]
gi|297320908|gb|EFH51329.1| hypothetical protein ARALYDRAFT_322482 [Arabidopsis lyrata subsp.
lyrata]
Length = 582
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 301/519 (57%), Positives = 391/519 (75%), Gaps = 4/519 (0%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
RD +SN+Y ILKYSTW+SAQ+ L +L ++WDS+ +N+VLK HPPM+KAWLFFNW S+ +G
Sbjct: 62 RDIVSNIYNILKYSTWESAQEQLPHLGVRWDSHVINRVLKAHPPMQKAWLFFNWASQIKG 121
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F HD FTYTTMLDIFGEA RI SM VF LM+EKG+ ID VTYTS++HW+S++GDVDGA+
Sbjct: 122 FKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAM 181
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+WEEM+ C PT+VSYTAYMKILF + RV+EAT+VYK+M++ + PNC+TYTVLMEYL
Sbjct: 182 RLWEEMRDDGCEPTVVSYTAYMKILFADGRVEEATEVYKDMLRSRVSPNCHTYTVLMEYL 241
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
V GK EEAL+IF KMQE GVQPDK ACNILI K CK GET + IL YMKEN + LRY
Sbjct: 242 VGTGKCEEALDIFFKMQEIGVQPDKPACNILIVKACKFGETSFMARILVYMKENGVVLRY 301
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPE-FISDNDAVEFVTTDIEGPLSIDQGLVL-- 298
P+F EA +T K A E+D LL QV+ S E + D E TT+++ S D V+
Sbjct: 302 PIFLEASETLKAAGESDDLLRQVNSHISAESLLCSKDIDETPTTEVDDTNSSDDSRVISS 361
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+LL K+NLV++D +L+ ++D++I+LDS+V+S I+E NCD R +GA LA EYS KM ++L
Sbjct: 362 VLLMKQNLVSVDLILNQMIDRNIKLDSSVVSAIVETNCDRCRTEGASLALEYSSKMGIHL 421
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
E++A+LALIG +++N PKV E+V+EM KA HSLG Y GA+LIHRLG +RP AA++F
Sbjct: 422 EKSAHLALIGHFLRVNELPKVIEVVKEMLKAQHSLGCYQGAMLIHRLGFGKRPRLAAEVF 481
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
LLP+DQK A YTAL+ VY SAGS +KA+KI M + I PSLGT+NVLL+GLEK+
Sbjct: 482 DLLPDDQKGVAAYTALMDVYISAGSPEKAMKILGEMREREIMPSLGTYNVLLSGLEKISE 541
Query: 479 VS-DAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
+A + RKEKK + A A ++ V +E+KICDLL+ +
Sbjct: 542 FQKEAALLRKEKKILVATARFREIVHVEDKICDLLFATN 580
>gi|42568859|ref|NP_178248.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546783|sp|Q9ZU29.2|PP139_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01390
gi|330250351|gb|AEC05445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 299/518 (57%), Positives = 388/518 (74%), Gaps = 3/518 (0%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
RD +SN+Y ILKYS WDSAQ+ L +L ++WDS+ +N+VLK HPPM+KAWLFFNW ++ +G
Sbjct: 58 RDIVSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKG 117
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F HD FTYTTMLDIFGEA RI SM VF LM+EKG+ ID VTYTS++HW+S++GDVDGA+
Sbjct: 118 FKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAM 177
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+WEEM+ C PT+VSYTAYMK+LF + RV+EAT+VYKEM++ + PNC+TYTVLMEYL
Sbjct: 178 RLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYL 237
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
V GK EEAL+IF KMQE GVQPDKAACNILI K K GET + +L YMKEN + LRY
Sbjct: 238 VATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRY 297
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL--I 299
P+F EAL+T K A E+D LL +V+ S E + +D E T ++ + D V+ +
Sbjct: 298 PIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSV 357
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
LL K+NLVA+D LL+ + D++I+LDS V+S IIE NCD R +GA LAF+YS++M ++L+
Sbjct: 358 LLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLK 417
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
++AYLALIG ++ N PKV E+V+EM KA HSLG Y GA+LIHRLG RRP AA +F
Sbjct: 418 KSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFD 477
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
LLP+DQK A YTAL+ VY SAGS +KA+KI + M + I PSLGT++VLL+GLEK
Sbjct: 478 LLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGLEKTSDF 537
Query: 480 S-DAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
+ + RKEKKS+ A A ++ V +E+KICDLL+ +
Sbjct: 538 QKEVALLRKEKKSLVASARFRENVHVEDKICDLLFATN 575
>gi|449461469|ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g01390-like [Cucumis sativus]
Length = 1058
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/514 (57%), Positives = 380/514 (73%), Gaps = 1/514 (0%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
RDT+ N+ IL+ +W SAQ L+ LPI+WDSY +NQVLKTHPP+EK WLFFNW S +
Sbjct: 118 RDTVRNICNILRNCSWASAQKHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWASTLQV 177
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F HD++TYTTMLDIFGEA RISSM YVF+ M+EKGI IDAVTYTS+MHW SN+GDVDGA+
Sbjct: 178 FKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGDVDGAI 237
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+W+EMK C+PT+VSYTAY+KIL N ++ EAT YK+M+Q GL PNC YT+LMEYL
Sbjct: 238 KLWKEMKANGCHPTVVSYTAYIKILLDNGQINEATATYKKMLQSGLSPNCCIYTILMEYL 297
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ GK +EAL+IFSKMQ+AGV PDKAACNILI+KCCK+GE + IL +MKENR LRY
Sbjct: 298 IGEGKCKEALDIFSKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEFMKENRFVLRY 357
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
PVF EA +T K + +LL QV+P E IS + V+ T P ++D L+ +LL
Sbjct: 358 PVFVEAHETLKSCSVSYALLKQVNPHMEIESISKGEVVDVSTGSNTVPPNVDNELLAMLL 417
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K L A+D +L GI+DK+IQLDS++I +IIEVNC R + ALLAF+Y +K +N++R
Sbjct: 418 KDNKLTAVDHMLIGIVDKNIQLDSSIIYSIIEVNCKSNRPNSALLAFDYCLKNSVNIKRK 477
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
YL LIGILI+ + +PK+ EIV+EM GH LG+Y L++ LG A +P A K+F++L
Sbjct: 478 LYLDLIGILIRSSIYPKLLEIVQEMYTQGHCLGLYHATLILCSLGKAGKPQYARKVFNML 537
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
PE+ KCTATYTAL+ YFSAGS+ K LKI++TM +KG PSLGT+NVLL GL K GR +
Sbjct: 538 PEELKCTATYTALVDGYFSAGSSGKGLKIFETMRKKGFTPSLGTYNVLLNGLAKNGRGVE 597
Query: 482 AEIYRKEKKSIQADALSK-DAVPMEEKICDLLYG 514
IYR+EKKS + S+ + + +E+ICDLL+G
Sbjct: 598 LNIYRREKKSFEISHHSRLNTILDDERICDLLFG 631
>gi|115481668|ref|NP_001064427.1| Os10g0358700 [Oryza sativa Japonica Group]
gi|110288952|gb|AAP53278.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|110288953|gb|ABG66030.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639036|dbj|BAF26341.1| Os10g0358700 [Oryza sativa Japonica Group]
gi|215712262|dbj|BAG94389.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715192|dbj|BAG94943.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 548
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/516 (43%), Positives = 333/516 (64%), Gaps = 11/516 (2%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
RD + V IL+ W +A+ LL +LP + WDS+TV +VLK HPP+ KA+LFF + +
Sbjct: 35 RDVVRRVDAILRGHPWSAARPLLLSLPGLAWDSHTVARVLKAHPPLHKAFLFFRLAAGAG 94
Query: 61 G-FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G F HDRFTYT+ML + GEA R+ +M + M G++ DA T+T+VMHWL++AGDVD
Sbjct: 95 GGFRHDRFTYTSMLHLLGEAGRVPAMMRLLAEMLRAGVDPDAATFTTVMHWLAHAGDVDA 154
Query: 120 AVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ +WEEM+ ++ C PT+VSYTA +KILF R EA +V++EM+ GL P+C TYTVL
Sbjct: 155 AMRVWEEMRARKGKCRPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVL 214
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+E+L GK+E +EI KMQEAGV+PDKA CNIL++KC +AGET + IL+YMKEN +
Sbjct: 215 IEHLANVGKFEATMEIMDKMQEAGVEPDKALCNILVQKCSRAGETSVMTRILQYMKENFI 274
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
LR P+F EAL+ K E+D+LL +V+P + E I + A TD+ G +++ + +
Sbjct: 275 VLRRPIFLEALEALKANGESDNLLREVNPHLAFEGIECDPAF----TDL-GYITV-RSTI 328
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L LL +N A++ +++ + K+I+++S ++S II+ +C + R L YS+++
Sbjct: 329 LYLLASRNWSAVEHMINEMTPKNIKVESHILSDIIQASCANCRPSCGLAVLRYSLRIGNE 388
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
L+R+AY +L+G I+ +F V EIVE + K+G +LG YL ++LI +L A A +I
Sbjct: 389 LDRSAYGSLLGHYIRNGSFDLVFEIVEILIKSGCNLGTYLSSILIIKLACAGHSSTAVRI 448
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
F LL D K TYTAL+ YF G DKAL+++ M G+ GT+ VL+ GL+ G
Sbjct: 449 FGLLTTD-KNVVTYTALMSAYFQDGKVDKALQLFLQMSANGVSACPGTYEVLIHGLQMAG 507
Query: 478 RVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLY 513
R ++E YR+E+ +Q ++ E+ +C+ L+
Sbjct: 508 RKQESEHYRRERMEMQWHLQYRNEHSPEDSLCNHLF 543
>gi|413945438|gb|AFW78087.1| hypothetical protein ZEAMMB73_223692 [Zea mays]
Length = 546
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/516 (43%), Positives = 326/516 (63%), Gaps = 10/516 (1%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR-S 59
RD + IL+ W +A+ LL +LP + WDS+TV +VLKTHPP++KA+LFF + S
Sbjct: 36 RDVVRRATAILRDQPWSAARPLLLSLPGLAWDSHTVARVLKTHPPLQKAFLFFRLATTAS 95
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R F HDRFTYT+M+ + GEA R+ +M + M GI DA T+T+VMHWL+ AGDVDG
Sbjct: 96 RTFRHDRFTYTSMIHLLGEAGRVPAMLRLLAEMLRAGIAPDAATFTTVMHWLARAGDVDG 155
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +W EMK + PT+VSYTA +KILF + +EA V +EM+ GL P C TYTVL+E
Sbjct: 156 AMRVWAEMKARS-RPTVVSYTACIKILFDARKAEEARGVLREMVAEGLRPTCKTYTVLIE 214
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+L GK+E LEI KM+EA VQPDKA CNIL++KC +AGET + IL+YMKE+ + L
Sbjct: 215 HLADTGKFEATLEIMDKMKEACVQPDKALCNILVQKCSRAGETSVLTCILQYMKEHFIVL 274
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
R P+F EALQ K + ++D LL +V+P S E I +ND + +G L+ D+ ++L
Sbjct: 275 RRPIFLEALQALKASGDSDELLREVNPHLSYEGI-ENDPI----LSDQGYLT-DRSIILY 328
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L+ AI+ +++ + K++++++ ++S +IE +C R+ L Y + + L
Sbjct: 329 LMSANKWSAIEQMVNQMAPKNVKMETHILSDVIEASCADRKPSCGLAVMRYGLGVGCELG 388
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R+AY +L+G I+ ++F V EIVEE+ K+G +LG Y+ ++LI RLG A + AA IF
Sbjct: 389 RSAYCSLLGQYIRTDSFDLVLEIVEELIKSGCNLGTYVSSVLILRLGYAGQSACAAHIFG 448
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
LL D K +YTALI YF AG D AL ++ M I LGT+ VL+ GLEK G
Sbjct: 449 LLTAD-KNVVSYTALINAYFQAGKVDGALDLFTQMRTNRISACLGTYEVLIHGLEKAGLK 507
Query: 480 SDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGG 515
+++ YR+E+ ++Q E+ +C+ L+ G
Sbjct: 508 QESDYYRRERMNMQWHLQYHGPQSPEDTLCNHLFCG 543
>gi|218184371|gb|EEC66798.1| hypothetical protein OsI_33201 [Oryza sativa Indica Group]
Length = 520
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/462 (44%), Positives = 302/462 (65%), Gaps = 11/462 (2%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
RD + V IL+ W +A+ LL +LP + WDS+TV +VLK HPP+ KA+LFF + +
Sbjct: 35 RDVVRRVDAILRGHPWSAARPLLLSLPGLAWDSHTVARVLKAHPPLHKAFLFFRLAAGAG 94
Query: 61 G-FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G F HDRFTYT+ML + GEA R+ +M + M G++ DA T+T+VMHWL++AGDVD
Sbjct: 95 GGFRHDRFTYTSMLHLLGEAGRVPAMMRLLAEMLRAGVDPDAATFTTVMHWLAHAGDVDA 154
Query: 120 AVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ +WEEM+ ++ C PT+VSYTA +KILF R EA +V++EM+ GL P+C TYTVL
Sbjct: 155 AMRVWEEMRARKGKCRPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVL 214
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+E+L GK+E +EI KMQEAGV+PDKA CNIL++KC +A ET + IL+YMKEN +
Sbjct: 215 IEHLANVGKFEATMEIMDKMQEAGVEPDKALCNILVQKCSRACETSVMTRILQYMKENFI 274
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
LR P+F EAL+ K E+D+LL +V+P + E I + A TD+ G +++ + +
Sbjct: 275 VLRRPIFLEALEALKANGESDNLLREVNPHLAFEGIECDPAF----TDL-GYITV-RSTI 328
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L LL +N A++ +++ + K+I+++S ++S II+ +C + R L YS+++
Sbjct: 329 LYLLASRNWSAVEHMINEMTPKNIKVESHILSDIIQASCANCRPSCGLAVLRYSLRIGNE 388
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
L+R+AY +L+G I+ +F V EIVE + K+G +LG YL ++LI +L A A +I
Sbjct: 389 LDRSAYGSLLGHYIRNGSFDLVFEIVEILIKSGCNLGTYLSSILIIKLACAGHSSTAVRI 448
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
F LL D+ TYTAL+ YF G DKAL+++ M G+
Sbjct: 449 FGLLTTDKN-VVTYTALMSAYFQDGKVDKALQLFSQMSANGV 489
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R Y +++ +L + P + ++ EM +AG ++H L A A +++
Sbjct: 100 DRFTYTSMLHLLGEAGRVPAMMRLLAEMLRAGVDPDAATFTTVMHWLAHAGDVDAAMRVW 159
Query: 419 S-LLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ KC T YTA + + F AG +A ++++ M +G+ PS T+ VL+ L
Sbjct: 160 EEMRARKGKCRPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVLIEHLA 219
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLL 512
+G+ E D + + V ++ +C++L
Sbjct: 220 NVGKF--------EATMEIMDKMQEAGVEPDKALCNIL 249
>gi|222612685|gb|EEE50817.1| hypothetical protein OsJ_31213 [Oryza sativa Japonica Group]
Length = 522
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/464 (43%), Positives = 297/464 (64%), Gaps = 13/464 (2%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNWVS--R 58
RD + V IL+ W +A+ LL +LP + WDS+TV +VLK HPP+ KA+LFF + R
Sbjct: 35 RDVVRRVDAILRGHPWSAARPLLLSLPGLAWDSHTVARVLKAHPPLHKAFLFFRLAAGRR 94
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS-VMHWLSNAGDV 117
+ GF HDRFTYT+ML + GEA R+ +M + M G+ + VMHWL++AGDV
Sbjct: 95 AAGFRHDRFTYTSMLHLLGEAGRVPAMMRLLAEMLRAGVEPPTPPPSPTVMHWLAHAGDV 154
Query: 118 DGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ + +WEEM+ ++ C PT+VSYTA +KILF R EA +V++EM+ GL P+C TYT
Sbjct: 155 EAPIRVWEEMRARKGKCRPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYT 214
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
VL+E+L GK+E +EI KMQEAGV+PDKA CNIL++KC +AGET + IL+YMKEN
Sbjct: 215 VLIEHLANVGKFEATMEIMDKMQEAGVEPDKALCNILVQKCSRAGETSVMTRILQYMKEN 274
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ LR P+F EAL+ K E+D+LL +V+P + E I + A TD+ G +++ +
Sbjct: 275 FIVLRRPIFLEALEALKANGESDNLLREVNPHLAFEGIECDPAF----TDL-GYITV-RS 328
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+L LL +N A++ +++ + K+I+++S ++S II+ +C + R L YS+++
Sbjct: 329 TILYLLASRNWSAVEHMINEMTPKNIKVESHILSDIIQASCANCRPSCGLAVLRYSLRIG 388
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L+R+AY +L+G I+ +F V EIVE + K+G +LG YL ++LI +L A A
Sbjct: 389 NELDRSAYGSLLGHYIRNGSFDLVFEIVEILIKSGCNLGTYLSSILIIKLACAGHSSTAV 448
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+IF LL D K TYTAL+ YF G DKAL+++ M G+
Sbjct: 449 RIFGLLTTD-KNVVTYTALMSAYFQDGKVDKALQLFLQMSANGV 491
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKI 417
+R Y +++ +L + P + ++ EM +AG ++H L A ++
Sbjct: 101 DRFTYTSMLHLLGEAGRVPAMMRLLAEMLRAGVEPPTPPPSPTVMHWLAHAGDVEAPIRV 160
Query: 418 FS-LLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ + KC T YTA + + F AG +A ++++ M +G+ PS T+ VL+ L
Sbjct: 161 WEEMRARKGKCRPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVLIEHL 220
Query: 474 EKLGRV-SDAEIYRKEKKSIQADALSKDAVPMEEKICDLL 512
+G+ + EI D + + V ++ +C++L
Sbjct: 221 ANVGKFEATMEIM---------DKMQEAGVEPDKALCNIL 251
>gi|18767384|gb|AAL79350.1|AC099402_14 Putative membrane-associated salt-inducible protein [Oryza sativa]
Length = 959
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 201/521 (38%), Positives = 299/521 (57%), Gaps = 70/521 (13%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
RD + V IL+ W +A+ LL +LP + WDS+TV +VLK HPP+ KA+LFF + +
Sbjct: 398 RDVVRRVDAILRGHPWSAARPLLLSLPGLAWDSHTVARVLKAHPPLHKAFLFFRLAAGAG 457
Query: 61 G-FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G F HDRFTYT+ML + GEA R+ +M + M G++ DA T+T+VMHWL++AGDVD
Sbjct: 458 GGFRHDRFTYTSMLHLLGEAGRVPAMMRLLAEMLRAGVDPDAATFTTVMHWLAHAGDVDA 517
Query: 120 AVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN------- 170
A+ +WEEM+ ++ C PT+VSYTA +KILF R EA +V++EM+ GL P+
Sbjct: 518 AMRVWEEMRARKGKCRPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVL 577
Query: 171 ------------------------CYTYTVLMEYLVRA---------------------- 184
C ++ +YL
Sbjct: 578 IEHLANVGEVFDQMPTMLFVTSTFCTALSLCTQYLSEVLHSLSHLCSTSCEEKIEQLLAF 637
Query: 185 ------GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
GK+E +EI KMQEAGV+PDKA CNIL++KC +AGET + IL+YMKEN +
Sbjct: 638 WNTLYIGKFEATMEIMDKMQEAGVEPDKALCNILVQKCSRAGETSVMTRILQYMKENFIV 697
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
LR P+F EAL+ K E+D+LL +V+P + E I + A TD+ G +++ + +L
Sbjct: 698 LRRPIFLEALEALKANGESDNLLREVNPHLAFEGIECDPAF----TDL-GYITV-RSTIL 751
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
LL +N A++ +++ + K+I+++S ++S II+ +C + R L YS+++ L
Sbjct: 752 YLLASRNWSAVEHMINEMTPKNIKVESHILSDIIQASCANCRPSCGLAVLRYSLRIGNEL 811
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R+AY +L+G I+ +F V EIVE + K+G +LG YL ++LI +L A A +IF
Sbjct: 812 DRSAYGSLLGHYIRNGSFDLVFEIVEILIKSGCNLGTYLSSILIIKLACAGHSSTAVRIF 871
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
LL D K TYTAL+ YF G DKAL+++ M G+
Sbjct: 872 GLLTTD-KNVVTYTALMSAYFQDGKVDKALQLFLQMSANGV 911
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R Y +++ +L + P + ++ EM +AG ++H L A A +++
Sbjct: 463 DRFTYTSMLHLLGEAGRVPAMMRLLAEMLRAGVDPDAATFTTVMHWLAHAGDVDAAMRVW 522
Query: 419 S-LLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ KC T YTA + + F AG +A ++++ M +G+ PS T+ VL+ L
Sbjct: 523 EEMRARKGKCRPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVLIEHLA 582
Query: 475 KLGRVSD 481
+G V D
Sbjct: 583 NVGEVFD 589
>gi|224133900|ref|XP_002327707.1| predicted protein [Populus trichocarpa]
gi|222836792|gb|EEE75185.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 132/186 (70%), Positives = 158/186 (84%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
MRD ISN+YKILKYSTWDSAQ+ L L IKWDS+TVNQ+LKTHPPMEKAWLFFNW S+ +
Sbjct: 40 MRDIISNIYKILKYSTWDSAQEELTKLNIKWDSFTVNQILKTHPPMEKAWLFFNWASKLK 99
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
F HD+FTYTTMLDIFGEA RI SMKYVF+ MQE G+ ID VTYTS+++W+S +GDVDGA
Sbjct: 100 RFKHDQFTYTTMLDIFGEAGRIESMKYVFKKMQEMGLKIDVVTYTSILNWVSKSGDVDGA 159
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V IW+EM+ C+PT+VSYTAY+K+LF N RVKE DVYKEM++ G+ PNC+TYTVLME+
Sbjct: 160 VKIWKEMRENMCFPTVVSYTAYLKVLFDNKRVKEGIDVYKEMLESGISPNCHTYTVLMEH 219
Query: 181 LVRAGK 186
LV G+
Sbjct: 220 LVVTGE 225
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD-LNLERTAYLALIG 368
DS + +I+ DS ++ I++ H + A L F ++ K+ ++ Y ++
Sbjct: 57 DSAQEELTKLNIKWDSFTVNQILKT---HPPMEKAWLFFNWASKLKRFKHDQFTYTTMLD 113
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--K 426
I + + + ++M + G + V +++ + + A KI+ + E+
Sbjct: 114 IFGEAGRIESMKYVFKKMQEMGLKIDVVTYTSILNWVSKSGDVDGAVKIWKEMRENMCFP 173
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+YTA + V F + + +YK M GI P+ T+ VL+ L
Sbjct: 174 TVVSYTAYLKVLFDNKRVKEGIDVYKEMLESGISPNCHTYTVLMEHL 220
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
+TYT +++ AG+ E +F KMQE G++ D ++ K+G+ + I +
Sbjct: 106 FTYTTMLDIFGEAGRIESMKYVFKKMQEMGLKIDVVTYTSILNWVSKSGDVDGAVKIWKE 165
Query: 232 MKEN 235
M+EN
Sbjct: 166 MREN 169
>gi|18057130|gb|AAL58153.1|AC093093_26 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 704
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 136/260 (52%), Positives = 185/260 (71%), Gaps = 4/260 (1%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
RD + V IL+ W +A+ LL +LP + WDS+TV +VLK HPP+ KA+LFF + +
Sbjct: 382 RDVVRRVDAILRGHPWSAARPLLLSLPGLAWDSHTVARVLKAHPPLHKAFLFFRLAAGAG 441
Query: 61 G-FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G F HDRFTYT+ML + GEA R+ +M + M G++ DA T+T+VMHWL++AGDVD
Sbjct: 442 GGFRHDRFTYTSMLHLLGEAGRVPAMMRLLAEMLRAGVDPDAATFTTVMHWLAHAGDVDA 501
Query: 120 AVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ +WEEM+ ++ C PT+VSYTA +KILF R EA +V++EM+ GL P+C TYTVL
Sbjct: 502 AMRVWEEMRARKGKCRPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVL 561
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+E+L GK+E +EI KMQEAGV+PDKA CNIL++KC +AGET + IL+YMKEN +
Sbjct: 562 IEHLANVGKFEATMEIMDKMQEAGVEPDKALCNILVQKCSRAGETSVMTRILQYMKENFI 621
Query: 238 ALRYPVFKEALQTFKVADEN 257
LR P+F EAL+ K D+N
Sbjct: 622 VLRRPIFLEALEALKANDKN 641
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R Y +++ +L + P + ++ EM +AG ++H L A A +++
Sbjct: 447 DRFTYTSMLHLLGEAGRVPAMMRLLAEMLRAGVDPDAATFTTVMHWLAHAGDVDAAMRVW 506
Query: 419 S-LLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ KC T YTA + + F AG +A ++++ M +G+ PS T+ VL+ L
Sbjct: 507 EEMRARKGKCRPTLVSYTACVKILFDAGRPAEAREVFQEMVAEGLRPSCKTYTVLIEHLA 566
Query: 475 KLGR 478
+G+
Sbjct: 567 NVGK 570
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 21/132 (15%)
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F+ V L Y LI L + F EI+++M +AG L +L+ +
Sbjct: 543 FQEMVAEGLRPSCKTYTVLIEHLANVGKFEATMEIMDKMQEAGVEPDKALCNILVQKCSR 602
Query: 408 A--------------------RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
A RRP+ + +L D K TYTAL+ YF G DKA
Sbjct: 603 AGETSVMTRILQYMKENFIVLRRPIFLEALEALKAND-KNVVTYTALMSAYFQDGKVDKA 661
Query: 448 LKIYKTMCRKGI 459
L+++ M G+
Sbjct: 662 LQLFLQMSANGV 673
>gi|4262245|gb|AAD14538.1| predicted by genscan and genefinder [Arabidopsis thaliana]
Length = 248
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 154/185 (83%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
RD +SN+Y ILKYS WDSAQ+ L +L ++WDS+ +N+VLK HPPM+KAWLFFNW ++ +G
Sbjct: 58 RDIVSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKG 117
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F HD FTYTTMLDIFGEA RI SM VF LM+EKG+ ID VTYTS++HW+S++GDVDGA+
Sbjct: 118 FKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAM 177
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+WEEM+ C PT+VSYTAYMK+LF + RV+EAT+VYKEM++ + PNC+TYTVLMEYL
Sbjct: 178 RLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYL 237
Query: 182 VRAGK 186
V G+
Sbjct: 238 VATGQ 242
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 8/174 (4%)
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD-LNLERTAYLALIG 368
DS + ++ DS +I+ +++ H A L F ++ ++ + Y ++
Sbjct: 74 DSAQEQLPHLGVRWDSHIINRVLKA---HPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLD 130
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
I + + + M + G + LIH + S+ A +++ + D C
Sbjct: 131 IFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM-RDNGCE 189
Query: 429 AT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
T YTA + + F+ G ++A ++YK M R + P+ T+ VL+ L G++
Sbjct: 190 PTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGQL 243
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 405 LGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
G A R +F L+ E T TYT+LI S+G D A+++++ M G P+
Sbjct: 132 FGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPT 191
Query: 463 LGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
+ ++ + L GRV +A E+Y++ +S
Sbjct: 192 VVSYTAYMKMLFADGRVEEATEVYKEMLRS 221
>gi|226497622|ref|NP_001145695.1| uncharacterized protein LOC100279199 [Zea mays]
gi|219884047|gb|ACL52398.1| unknown [Zea mays]
Length = 288
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/245 (52%), Positives = 171/245 (69%), Gaps = 3/245 (1%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR-S 59
RD + IL+ W +A+ LL +LP + WDS+TV +VLKTHPP++KA+LFF + S
Sbjct: 36 RDVVRRATAILRDQPWSAARPLLLSLPGLAWDSHTVARVLKTHPPLQKAFLFFRLATTAS 95
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R F HDRFTYT+M+ + GEA R+ +M + M GI DA T+T+VMHWL+ AGDVDG
Sbjct: 96 RTFRHDRFTYTSMIHLLGEAGRVPAMLRLLAEMLRAGIAPDAATFTTVMHWLARAGDVDG 155
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +W EMK + PT+VSYTA +KILF + +EA V +EM+ GL P C TYTVL+E
Sbjct: 156 AMRVWAEMKARS-RPTVVSYTACIKILFDARKAEEARGVLREMVAEGLRPTCKTYTVLIE 214
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+L GK+E LEI KM+EA VQPDKA CNIL++KC +AGET + IL+YMKE+ + L
Sbjct: 215 HLADTGKFEATLEIMDKMKEACVQPDKALCNILVQKCSRAGETSVLTCILQYMKEHFIVL 274
Query: 240 RYPVF 244
R P+F
Sbjct: 275 RRPIF 279
>gi|357121156|ref|XP_003562287.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g01390-like [Brachypodium distachyon]
Length = 293
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/251 (49%), Positives = 168/251 (66%), Gaps = 8/251 (3%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
RD + V IL+ W A+ LL +LP + WDS+TV +VLKTHPP++KA+LFF S
Sbjct: 34 RDIVRRVNTILRDHPWSEARPLLLSLPGLIWDSHTVARVLKTHPPLQKAFLFFRLASSPA 93
Query: 61 G-----FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
F HDR+TYT+ML + GEA R+ +M + M ++ DA T+T+VMHWL+ AG
Sbjct: 94 ANPRATFRHDRYTYTSMLHLLGEAGRVPAMLRLLAEMLRARVDPDAATFTTVMHWLARAG 153
Query: 116 DVDGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
DVD A+ +WEEM+ + C PT+VSYTA +KILF R E V++EM+ GL P+C T
Sbjct: 154 DVDAAMRVWEEMRSRRGRCRPTLVSYTACVKILFDAGRAAEGRRVFEEMVAEGLRPSCTT 213
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
YTVL+E+L AGK++ LEI S M++AGV+PDK CNIL++KC +A E + LIL+YMK
Sbjct: 214 YTVLIEHLADAGKFKATLEIMSNMRDAGVEPDKPLCNILVQKCSRAREISVLTLILQYMK 273
Query: 234 ENRLALRYPVF 244
+ + LR P F
Sbjct: 274 QKLIVLRRPXF 284
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R Y +++ +L + P + ++ EM +A ++H L A A +++
Sbjct: 103 DRYTYTSMLHLLGEAGRVPAMLRLLAEMLRARVDPDAATFTTVMHWLARAGDVDAAMRVW 162
Query: 419 SLLPEDQ-KCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ + +C T YTA + + F AG A + ++++ M +G+ PS T+ VL+ L
Sbjct: 163 EEMRSRRGRCRPTLVSYTACVKILFDAGRAAEGRRVFEEMVAEGLRPSCTTYTVLIEHLA 222
Query: 475 KLGR 478
G+
Sbjct: 223 DAGK 226
>gi|3785969|gb|AAC67316.1| hypothetical protein [Arabidopsis thaliana]
gi|20197582|gb|AAM15140.1| hypothetical protein [Arabidopsis thaliana]
Length = 218
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 158/213 (74%), Gaps = 1/213 (0%)
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
K+NLVA+D LL+ + D++I+LDS V+S IIE NCD R +GA LAF+YS++M ++L+++A
Sbjct: 2 KQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSA 61
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
YLALIG ++ N PKV E+V+EM KA HSLG Y GA+LIHRLG RRP AA +F LLP
Sbjct: 62 YLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLLP 121
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS-D 481
+DQK A YTAL+ VY SAGS +KA+KI + M + I PSLGT++VLL+GLEK +
Sbjct: 122 DDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGLEKTSDFQKE 181
Query: 482 AEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
+ RKEKKS+ A A ++ V +E+KICDLL+
Sbjct: 182 VALLRKEKKSLVASARFRENVHVEDKICDLLFA 214
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 83/185 (44%), Gaps = 10/185 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R R D F + +++ + R F+ E GI++ Y +++ + ++
Sbjct: 16 RDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNEL 75
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKI--LFLNDRVKEATDVYKEMI--QRGLPPNCYT 173
+ + +EM + ++ Y M I L R + A DV+ + Q+G+
Sbjct: 76 PKVIEVVKEMV--KAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLLPDDQKGVA----A 129
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
YT LM+ + AG E+A++I +M+E + P ++L+ K + + + +LR K
Sbjct: 130 YTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGLEKTSDFQKEVALLRKEK 189
Query: 234 ENRLA 238
++ +A
Sbjct: 190 KSLVA 194
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+++ IK DS+ V+ +++T+ E A L F++ S G + + Y ++ F +
Sbjct: 15 MRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDY-SLEMGIHLKKSAYLALIGNFLRSN 73
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+ + V + M + ++ ++H L A ++++ L + + +YT
Sbjct: 74 ELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFD--LLPDDQKGVAAYT 131
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
A M + ++A + +EM +R + P+ TY VL+ L + +++ + + K +++
Sbjct: 132 ALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGLEKTSDFQKEVALLRKEKKS 191
Query: 201 GVQPDKAACNILIE-KCC 217
V + N+ +E K C
Sbjct: 192 LVASARFRENVHVEDKIC 209
>gi|242088031|ref|XP_002439848.1| hypothetical protein SORBIDRAFT_09g021220 [Sorghum bicolor]
gi|241945133|gb|EES18278.1| hypothetical protein SORBIDRAFT_09g021220 [Sorghum bicolor]
Length = 220
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 127/186 (68%), Gaps = 3/186 (1%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR-S 59
RD + IL+ W +A+ LL +LP + WDS+TV +VLKTHPP++KA+LFF + S
Sbjct: 36 RDVVRRATAILRDHPWSAARPLLLSLPGLAWDSHTVARVLKTHPPLQKAFLFFRLAATAS 95
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R F HDRFTYT+M+ + GEA R+ +M + M G+ DA T+T+VMHWL+ AGDVDG
Sbjct: 96 RTFRHDRFTYTSMIHLLGEAGRVPAMLRLLAEMLRAGVAPDAATFTTVMHWLARAGDVDG 155
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +W EMK + PT+VSYTA +KILF R +EA V++EM+ GL P C TYTVL+E
Sbjct: 156 AMRVWAEMKARS-RPTVVSYTACVKILFDAGRAEEARRVFREMVAEGLRPTCKTYTVLIE 214
Query: 180 YLVRAG 185
+L G
Sbjct: 215 HLADTG 220
>gi|75268015|sp|Q9ZU31.1|PP138_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01360
gi|4262243|gb|AAD14536.1| predicted by genscan and genefinder [Arabidopsis thaliana]
Length = 182
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 115/167 (68%), Gaps = 1/167 (0%)
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A LA ++S++M ++LE++AYLAL G ++ N KV ++V+EM K+ HSLGVY GA+LIH
Sbjct: 15 ASLALDWSLEMGIHLEKSAYLALAGNFLRSNELSKVIDVVKEMVKSQHSLGVYHGAMLIH 74
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
LG RRP AA+ LLP+DQK + YTAL+ VY SAGS +KA+KI M + I PSL
Sbjct: 75 MLGFGRRPSLAAEALDLLPDDQKGLSAYTALMDVYISAGSPEKAMKILGEMREREIMPSL 134
Query: 464 GTFNVLLAGLEKLGRVS-DAEIYRKEKKSIQADALSKDAVPMEEKIC 509
GT++VLL+GLEK + RKE+KS+ A ++ V +E+KIC
Sbjct: 135 GTYDVLLSGLEKTSDFQRETSSLRKEQKSLVASTRFREIVHVEDKIC 181
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 224/475 (47%), Gaps = 27/475 (5%)
Query: 34 YTVNQVLKTHPPME---KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
YT+N ++ + M +A L+ + + ++ G + D FTYT+++ + ++S VF
Sbjct: 215 YTLNTMVNAYSKMGNIVEANLYVSKIFQA-GLSPDSFTYTSLILGYCRNNDVNSAYKVFN 273
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
+M KG + V+YT+++H L AG +D ++++++M+ +CYPT+ +YT + LF ND
Sbjct: 274 MMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGND 333
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
R E D++ EM +R PN +TYTV+++ + + K +E+ I ++M E G+ P N
Sbjct: 334 RNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYN 393
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQ-VHP 266
LI C+ G + IL M+ N + E + F K + +LL + +
Sbjct: 394 ALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLES 453
Query: 267 QFSPEFISDNDAVE-----------FVTTDI--EGPLSIDQG----LVLILLKKKNLVAI 309
+ +P ++ N + + D+ E L DQ + L K K +
Sbjct: 454 KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEA 513
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
L + + +K I+ + + + +I+ +C + D A+ E D + Y +LI
Sbjct: 514 CDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYG 573
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKC 427
+ K + +VE M+K G V +LI + A ++F+ + +
Sbjct: 574 VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPD 633
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TYTA I Y ++G+ +A + M G+ P T+ +L++ E+LG DA
Sbjct: 634 VYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDA 688
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 7/239 (2%)
Query: 13 KYSTWDSAQ---DLLKN---LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
K +DSA DLLK +P +W L ME+A FN + + +G +
Sbjct: 471 KAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL-KEKGIKANE 529
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
YT ++D +A +I + E M + ++ TY S+++ + G V +++ E
Sbjct: 530 VMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVEN 589
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M PT+ +YT ++ + A V+ +M+ G P+ YTYT + +G
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN 649
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+EA + ++M EAGV PD +LI + G +L+ M + +P++
Sbjct: 650 VKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWN 708
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 108/526 (20%), Positives = 208/526 (39%), Gaps = 59/526 (11%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEK--AWLFFNWVSRSR-GFNHDRF 67
IL + W K +P S+ V+ + HP + A FFN + + GF H
Sbjct: 63 ILSHPKWQRHPSFQKLIPNLSPSH-VSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVK 121
Query: 68 TYTTMLDIF--------GEAKRISSMK---------YVFELMQEKG-------INIDAVT 103
+++ +L I GE RIS +K ++ + +++ + +
Sbjct: 122 SHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRS 181
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
Y ++ L+ +D ++ EM P I + + + EA ++
Sbjct: 182 YNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIF 241
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q GL P+ +TYT L+ R A ++F+ M G + ++ + +I C+AG
Sbjct: 242 QAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRID 301
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL--WQVHPQFSPEFISDNDAVEF 281
I + + M+E+ YP + ND L + + N
Sbjct: 302 EGISLFKKMREDDC---YPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYT 358
Query: 282 VTTDI---EGPLSIDQGLVLILLKK---KNLVAIDSLLSGIMDKSIQLDSAV-ISTIIEV 334
V D E L + ++ +++K ++V ++L+ G ++ ++++A+ I ++E
Sbjct: 359 VMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG-RIEAALEILGLMES 417
Query: 335 N-------------CDHRRRDGALLAFEYSVKM---DLNLERTAYLALIGILIKLNTFPK 378
N C +R A KM L Y +LI + K F
Sbjct: 418 NNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDS 477
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIG 436
++++ + + G + ++ I L ++R A +F+ L E + YTALI
Sbjct: 478 AYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALID 537
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ AG D+A+ + + M + P+ T+N L+ G+ K G+V +
Sbjct: 538 GHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEG 583
>gi|79548894|ref|NP_178245.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|330250349|gb|AEC05443.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 158
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 107/157 (68%), Gaps = 1/157 (0%)
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
M ++LE++AYLAL G ++ N KV ++V+EM K+ HSLGVY GA+LIH LG RRP
Sbjct: 1 MGIHLEKSAYLALAGNFLRSNELSKVIDVVKEMVKSQHSLGVYHGAMLIHMLGFGRRPSL 60
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
AA+ LLP+DQK + YTAL+ VY SAGS +KA+KI M + I PSLGT++VLL+GL
Sbjct: 61 AAEALDLLPDDQKGLSAYTALMDVYISAGSPEKAMKILGEMREREIMPSLGTYDVLLSGL 120
Query: 474 EKLGRVS-DAEIYRKEKKSIQADALSKDAVPMEEKIC 509
EK + RKE+KS+ A ++ V +E+KIC
Sbjct: 121 EKTSDFQRETSSLRKEQKSLVASTRFREIVHVEDKIC 157
>gi|302776386|ref|XP_002971363.1| hypothetical protein SELMODRAFT_451140 [Selaginella moellendorffii]
gi|300161345|gb|EFJ27961.1| hypothetical protein SELMODRAFT_451140 [Selaginella moellendorffii]
Length = 745
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 11/244 (4%)
Query: 2 RDTISNVY----------KILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAW 50
RDTI + + +L+ W+ +Q ++ L + W+ V QVL+ + AW
Sbjct: 106 RDTIGSFFSKMEAAIEVGNVLREMGWNEDSQVKVEKLKVPWNPLVVLQVLRQPLEPDAAW 165
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
FF W+ G+ H TY +++++FG K ++ ++ V + M G ++ V +T+V+HW
Sbjct: 166 GFFQWLKGVEGYRHTEHTYNSLIEVFGRVKDVTGIQKVLDDMSAYGCGMNVVLFTTVIHW 225
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
S A D+D AV +W +M C P +V+YT M +L R ++ +++K+M+ G PN
Sbjct: 226 YSRADDIDRAVEMWNQMLKVGCLPNVVTYTMLMSLLTKLKRFRQVGEIFKDMVSAGCRPN 285
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TYTVL++ L +G + AL +F K+ P A +L++ AG+ + +
Sbjct: 286 VRTYTVLIQCLASSGNLDAALLVFEKLDSLKASPTAATFRVLMDSAASAGDLELLKGLFE 345
Query: 231 YMKE 234
MK+
Sbjct: 346 GMKK 349
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
+WD + V +VL + A FF WV + G+ HD F YT M+ + G S ++ +
Sbjct: 465 FRWDPWKVLRVLMGMRDVTAALRFFYWVEKQPGYKHDSFVYTKMISLLGRHHHFSQVEEL 524
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+Q I + VT S++ LS + + D A+ I+ MK + P +YT + +L
Sbjct: 525 LMKLQSSDIEVSIVTMNSIIFTLSVSHNPDLAMKIFYWMKDLKVKPNTRTYTTVIDMLVK 584
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
A +Y+EM+ G P+ +TYTVL++ L R GK + A + KM G +P+
Sbjct: 585 MRHFDRAMAIYQEMLDAGCKPDAHTYTVLIQSLGREGKIDAAEHLLEKMPLNGCKPNVVN 644
Query: 209 CNILIEKCCKAGETRTIILILRYMKE 234
LI G + + + M++
Sbjct: 645 YTSLINSLIHYGRVSHALAVFKRMQD 670
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++D+ + + +++ M + G DA TYT ++ L G +D A ++ E+M
Sbjct: 574 TYTTVIDMLVKMRHFDRAMAIYQEMLDAGCKPDAHTYTVLIQSLGREGKIDAAEHLLEKM 633
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L C P +V+YT+ + L RV A V+K M G+ PN TY+++ + L RA
Sbjct: 634 PLNGCKPNVVNYTSLINSLIHYGRVSHALAVFKRMQDEGVMPNSITYSLMSKGLKRANML 693
Query: 188 EEALEIFSKM 197
+ +E+ KM
Sbjct: 694 HDLVEVEKKM 703
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I +L + + F +V E++ ++ + + + +I L + P A KIF +
Sbjct: 505 YTKMISLLGRHHHFSQVEELLMKLQSSDIEVSIVTMNSIIFTLSVSHNPDLAMKIFYWM- 563
Query: 423 EDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+D K T TYT +I + D+A+ IY+ M G P T+ VL+ L + G++
Sbjct: 564 KDLKVKPNTRTYTTVIDMLVKMRHFDRAMAIYQEMLDAGCKPDAHTYTVLIQSLGREGKI 623
Query: 480 SDAE 483
AE
Sbjct: 624 DAAE 627
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 3/208 (1%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ + + K++ I +L + ++ + +T+I D A+ + +K+
Sbjct: 187 LIEVFGRVKDVTGIQKVLDDMSAYGCGMNVVLFTTVIHWYSRADDIDRAVEMWNQMLKVG 246
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
Y L+ +L KL F +V EI ++M AG V +LI L S+ A
Sbjct: 247 CLPNVVTYTMLMSLLTKLKRFRQVGEIFKDMVSAGCRPNVRTYTVLIQCLASSGNLDAAL 306
Query: 416 KIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+F L + AT+ L+ SAG + +++ M + P+ + ++ L
Sbjct: 307 LVFEKLDSLKASPTAATFRVLMDSAASAGDLELLKGLFEGMKKANQKPNGKMYFTVMDSL 366
Query: 474 EKLGRVSDAEIYRKEKKS-IQADALSKD 500
+K G++++A + +S I+AD L D
Sbjct: 367 KKAGKLTEAAPLLEAMESMIEADQLYAD 394
>gi|168063579|ref|XP_001783748.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664754|gb|EDQ51462.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 166
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 104/163 (63%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
L+ L + W+ + V VLK++ +KAW FFNW+ G+ H+ +TYTTM+D+FG+A +
Sbjct: 3 LERLGVPWNPFIVCGVLKSNIRAKKAWEFFNWLKSQEGYTHNVYTYTTMIDLFGKAGNYA 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+M+ V E M ++G ++ VTYT ++HW +A D++G +W++M K +V+YTAY+
Sbjct: 63 AMESVVEEMCQEGHSLSVVTYTILIHWYRHAKDLNGVRRVWKQMAEKSVKANVVTYTAYI 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
L + EA +V++EM + PN YTYTVL+ LV AGK
Sbjct: 123 DALVKGNCHLEAMEVFREMQESRCRPNIYTYTVLIHSLVEAGK 165
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I + K + + +VEEM + GHSL V +LIH A+ +++ +
Sbjct: 48 YTTMIDLFGKAGNYAAMESVVEEMCQEGHSLSVVTYTILIHWYRHAKDLNGVRRVWKQMA 107
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
E + TYTA I +A+++++ M P++ T+ VL+ L + G++
Sbjct: 108 EKSVKANVVTYTAYIDALVKGNCHLEAMEVFREMQESRCRPNIYTYTVLIHSLVEAGKL 166
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 215/473 (45%), Gaps = 24/473 (5%)
Query: 34 YTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
YT N+++ + + +VS+ G + D FTYT+++ + + K + S VF
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M KG + V YT ++H L A +D A++++ +MK EC+PT+ +YT +K L ++R
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
EA ++ KEM + G+ PN +TYTVL++ L K+E+A E+ +M E G+ P+ N
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS---LLWQVHPQF 268
LI CK G + ++ M+ +L+ + E ++ + ++ + + L + +
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKV 458
Query: 269 SPEFISDNDAVE-------FVTTDIEGPLSIDQGLV--------LI--LLKKKNLVAIDS 311
P+ ++ N ++ F + L D+GLV +I L K K +
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
L + K + + + + +I+ C + D A L E + + + ALI L
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR-LGSARRPVPAAKIFSLLPEDQKCTA- 429
+ + E+M K G V +LIHR L ++ +L K A
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TYT I Y G A + M G+ P L T++ L+ G LG+ + A
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 97/492 (19%), Positives = 188/492 (38%), Gaps = 65/492 (13%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIF-----------------GEAKRISSMKYVFEL 91
A F +W+S++ + H ++Y ++L + + YV +L
Sbjct: 106 ALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDL 165
Query: 92 MQEKGINIDAV----------TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ +N D Y ++++ L+ G VD ++ EM + P I +Y
Sbjct: 166 CRK--MNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ V+EA ++++ GL P+ +TYT L+ + + A ++F++M G
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK--VADENDS 259
+ ++ A LI C A + + MK++ +P + K E S
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC---FPTVRTYTVLIKSLCGSERKS 340
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTD---IEGPLSIDQGLVLILLKK---KNLVAIDSLL 313
+ + I N V D + + L+ +L+K N++ ++L+
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK-------------MDLNLER 360
+G + + D+ + ++E R+ + +K ++ LER
Sbjct: 401 NGYCKRGMIEDAVDVVELME----SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER 456
Query: 361 ------TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
Y +LI + F ++ M G + +I L ++R A
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+F L + YTALI Y AG D+A + + M K P+ TFN L+ G
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 473 LEKLGRVSDAEI 484
L G++ +A +
Sbjct: 577 LCADGKLKEATL 588
>gi|168024892|ref|XP_001764969.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683778|gb|EDQ70185.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 497
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 194/460 (42%), Gaps = 21/460 (4%)
Query: 44 PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVT 103
P + A FF W + GF HD +TY ++D +G+ + S+M V M+E G + VT
Sbjct: 3 PKSDAARKFFKWATTQPGFQHDVYTYAALIDYYGKRQNFSAMDQVVAEMKEAGCPLSTVT 62
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+TS++ W S + G +W++M P Y++Y+ L +EA V+KEM
Sbjct: 63 FTSLVVWHSQVKKLTGTRRVWQQMLDSGIKPNEYIYSSYIDALVKGGCHEEAIMVFKEMQ 122
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ G PN +TY+V++ LV + + E A E++ +M + +P+ A ++LI K +
Sbjct: 123 EAGCRPNIFTYSVVILSLVESMQLEAACELYERMTKLQYKPNSTAYSVLIRAHAKGPDME 182
Query: 224 TIILILRYMKENRL----ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
I R M ++ L +LR + EAL +E + L ++P +
Sbjct: 183 KAIYFYREMIDSGLTPSQSLR-SLLSEALTKQGRLNEAEELTQITQENYNPTRHMFTRIL 241
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAID--------------SLLSGIMDKSIQLDS 325
+ V G L + L N V D +LL ++ L
Sbjct: 242 DIVGKTGHGALQKEIILEAEAQAGGNAVTYDKVIKSYCLSKHTDAALLVRLLTSYSSLAG 301
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+T I ++ + + + FE + + + Y LI +L + + E+ E
Sbjct: 302 IFTATGINMHFNSFLKLCDVQVFERMKEQGIQPDANVYTTLIDVLSRTRGHTQAMEMYAE 361
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGS 443
M KA V ++H L + R A +F LP ATYT L+ A
Sbjct: 362 MVKAKCKPTVDTYTAILHSLARSGRVKAAITLFEKLPSFGVPPSIATYTILLKACLKADE 421
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ LK+Y M R G+ PS ++ GL G +A+
Sbjct: 422 LETVLKLYAGMRRDGLTPSRAIHRMVTRGLHAAGMHDEAD 461
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 195/440 (44%), Gaps = 23/440 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTYT+++ K + + VF +M +KG + V+YT+++H L AG ++ A
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEA 283
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +M C PT+ +YT + L + R EA +++ EM ++G PN +TYTVL++
Sbjct: 284 LKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDG 343
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + K +EA ++ S+M E G+ P N LI+ CK G IL M+ N
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403
Query: 241 YPVFKEAL----QTFKVADENDSLLWQVHPQFSPEFISDNDAV--EFVTTDIEGPLSI-- 292
+ E + + KV L + + SP I+ N + + D+E +
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463
Query: 293 ---DQGLVL----------ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ GLV L K+ + +L + K ++ + + + +I+ C
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ D A E + Y LI L K + + +V +M G V
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583
Query: 400 LLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
+LI + A K+F+ + Q TYTA + YFS G ++ + M +
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE 643
Query: 458 GIHPSLGTFNVLLAGLEKLG 477
GI P L T+ VL+ G +LG
Sbjct: 644 GILPDLVTYTVLIDGYARLG 663
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 174/427 (40%), Gaps = 23/427 (5%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+T+ M++ + + + + + + G++ D TYTS++ VD A ++
Sbjct: 195 YTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLI 254
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K C VSYT + L R+ EA ++ +M + P TYTVL+ L +G+
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--------A 238
EAL +F++M+E G +P+ +LI+ CK + +L M E L A
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 239 LRYPVFKEAL--QTFKVADENDSLLWQVHPQFSPEFISD-------NDAVEFVTTDIEGP 289
L KE + F++ D +S + + E I + A+ + +E
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 290 LSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
LS L+ K +L + LLS + + + D S I+ C R + A
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ + Y ALI K+ ++E M Y +LI L
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 406 GSARRPVPAAKIFS-LLPEDQKCT-ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
++ A+ + + +L K T TYT LIG G+ D ALK++ M G P +
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 464 GTFNVLL 470
T+ L
Sbjct: 615 CTYTAFL 621
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 210/538 (39%), Gaps = 71/538 (13%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
D + + IL W L K LP S+ V+ + + + A FFNW++ GF
Sbjct: 39 DLSAQLLSILSRPNWQKHPSLRKLLPSLTPSH-VSSLFAFNLDPQTALSFFNWIALRPGF 97
Query: 63 NHDRFTYTTMLDIFGEAK--------RISSMK---------YVFELMQEKGINIDA---- 101
H+ +Y++ML+I A+ RIS +K +V E+ ++ +N D
Sbjct: 98 KHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRK--MNADGEFKF 155
Query: 102 ----VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
Y +++ LS +D ++ E+ + P I ++ A + V EA
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+++Q GL P+ +TYT L+ R + A E+F M + G Q ++ + LI C
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 218 KAGETRTIILILRYMKENRLALRYPVFK-------------EALQTFKVADENDSLLWQV 264
+AG + + M E+ + EAL F E V
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEK-GCEPNV 334
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLS--IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
H + + D E + LS ++GL+ ++V ++L+ G + +
Sbjct: 335 H---TYTVLIDGLCKENKMDEARKMLSEMSEKGLI------PSVVTYNALIDGYCKEGMI 385
Query: 323 LDSAVISTIIEVN----------------CDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
D+ I ++E N C R+ A+ ++ L+ Y +L
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQ 425
I K+N ++ M + G + ++ I L R A +F S+ +
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505
Query: 426 KCT-ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
K YTALI Y G D A + + M P+ T+NVL+ GL K ++ +A
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/434 (19%), Positives = 163/434 (37%), Gaps = 48/434 (11%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A FN + + +G + TYT ++D + ++ + + M EKG+ VTY ++
Sbjct: 317 EALNLFNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ G +D A I + M+ C P +Y + L +V +A + +M++R L
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ TY L+ + E A + S M E G+ PD+ ++ I+ CK G
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
+ +K + ++ + + + D + + + ++ + IE
Sbjct: 496 LFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL---IE 552
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
G L K+K + SL++ ++ ++ + +I D AL
Sbjct: 553 G-----------LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F + V + + Y A + +V +++ +M + G
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG----------------- 644
Query: 408 ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
+LP+ TYT LI Y G +A K M G PSL +
Sbjct: 645 ------------ILPD----LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVS 688
Query: 468 VLLAGLEKLGRVSD 481
+L+ L R+ +
Sbjct: 689 ILIKNLSHENRMKE 702
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/380 (18%), Positives = 156/380 (41%), Gaps = 56/380 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A+ + ++ + G D++TY+ +D + R+ +F+ ++ KG+ + V YT
Sbjct: 455 LESAYRLLSLMNEN-GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G +D A ++ E M C P +Y ++ L ++KEA+ + +M+
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIF------------------------------- 194
G+ P TYT+L+ +++ G ++ AL++F
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEV 633
Query: 195 ----SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+KM E G+ PD +LI+ + G T L+ M + + ++ ++
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT--GCKPSLYIVSILI 691
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
++ EN + + + + +S+ ++V+ D+ L + L
Sbjct: 692 KNLSHENR--MKETRSEIGIDSVSNVNSVDI--ADVWKTLEYEIAL-------------- 733
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
L +++ +D ++ +I C R + A + + ++ Y +L+
Sbjct: 734 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 793
Query: 371 IKLNTFPKVAEIVEEMTKAG 390
KL + + +V+ M + G
Sbjct: 794 CKLGVYAEAVRLVDAMVENG 813
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 29/208 (13%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G+ D TYT L + + + V M E+GI D VTYT ++ + G
Sbjct: 607 SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTH 666
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE------------------------ 154
A + + M C P++ + +K L +R+KE
Sbjct: 667 RAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKT 726
Query: 155 -----ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
A ++++M++ G + Y L+ + + EEA + M+E G+ P +
Sbjct: 727 LEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 786
Query: 210 NILIEKCCKAGETRTIILILRYMKENRL 237
N L++ CCK G + ++ M EN L
Sbjct: 787 NSLLDCCCKLGVYAEAVRLVDAMVENGL 814
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 80 KRISSMKYVFELMQEKGI----NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
K +S + E E GI N+++V V L + + A+ ++E+M C
Sbjct: 692 KNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTL----EYEIALKLFEKMVEHGCTID 747
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ Y A + +R++EA + M +RG+ P+ Y L++ + G Y EA+ +
Sbjct: 748 VSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVD 807
Query: 196 KMQEAGVQP 204
M E G+ P
Sbjct: 808 AMVENGLLP 816
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+FE M E G ID Y +++ ++ A + MK + P+ Y + +
Sbjct: 735 LFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCC 794
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
EA + M++ GL P +Y +L+ L G E+A +F + G D+
Sbjct: 795 KLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEV 854
Query: 208 ACNILIE 214
A +LI+
Sbjct: 855 AWKVLID 861
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 214/480 (44%), Gaps = 27/480 (5%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPME---KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
L N I + YT N ++ + + +A L+ + + ++ G + D FTYT+++ K
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQA-GLHPDTFTYTSLILGHCRNK 243
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+ + VF +M +KG + V+YT+++H L AG ++ A+ ++ +M C PT+ +YT
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ L + R EA +++ EM ++G PN +TYTVL++ L + K +EA ++ S+M E
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL----QTFKVADE 256
G+ P N LI+ CK G IL M+ N + E + + KV
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423
Query: 257 NDSLLWQVHPQFSPEFISDNDAV--EFVTTDIEGPLSI-----DQGLVL----------I 299
L + + SP I+ N + + D+E + + GLV
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K+ + +L + K ++ + + + +I+ C + D A E +
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI L K + + +V +M G V +LI + A K+F+
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ Q TYTA + YFS G ++ + M +GI P L T+ VL+ G +LG
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLG 663
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 187/462 (40%), Gaps = 59/462 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A+ + ++ + G D++TY+ +D + R+ +F+ ++ KG+ + V YT
Sbjct: 455 LESAYRLLSLMNEN-GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G +D A ++ E M C P +Y ++ L ++KEA+ + +M+
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P TYT+L+ +++ G ++ AL++F+ M G QPD + G +
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEV 633
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
++ M E + L T+ V + + L H F +F+
Sbjct: 634 DDVIAKMNEEGIL-------PDLVTYTVLIDGYARLGLTHRAF-----------DFLKCM 675
Query: 286 IEGPLSIDQGLVLILLKK----------KNLVAIDS------------LLSGIMDKSIQL 323
++ +V IL+K ++ + IDS L +++ +
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTI 735
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D ++ +I C R + A + + ++ Y +L+ KL + + +V
Sbjct: 736 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 795
Query: 384 EEMTKAG-----HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATY-----TA 433
+ M + G S + + L I GS + A +F L C Y
Sbjct: 796 DAMVENGLLPLLESYKLLVCGLYIE--GSNEK---AKAVFHGL---LSCGYNYDEVAWKV 847
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
LI D+ ++ M KG P+ T+++L+ GLE+
Sbjct: 848 LIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 120/534 (22%), Positives = 212/534 (39%), Gaps = 63/534 (11%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
D + + IL W L K LP S+ V+ + + + A FFNW++ GF
Sbjct: 39 DLSAQLLSILSRPNWQKHPSLRKLLPSLTPSH-VSSLFAFNLDPQTALSFFNWIALRPGF 97
Query: 63 NHDRFTYTTMLDIFGEAK--------RISSMK---------YVFELMQEKGINIDA---- 101
H+ +Y++ML+I A+ RIS +K +V E+ ++ +N D
Sbjct: 98 KHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRK--MNADGEFKF 155
Query: 102 ----VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
Y +++ LS +D ++ E+ + P I ++ A + V EA
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+++Q GL P+ +TYT L+ R + A E+F M + G Q ++ + LI C
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275
Query: 218 KAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQ------F 268
+AG + + M E+ Y V AL E +L ++ +
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335
Query: 269 SPEFISDNDAVEFVTTDIEGPLS--IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ + D E + LS ++GL+ ++V ++L+ G + + D+
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLI------PSVVTYNALIDGYCKEGMIDDAF 389
Query: 327 VISTIIEVN----------------CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
I ++E N C R+ A+ ++ L+ Y +LI
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCT- 428
K+N ++ M + G + ++ I L R A +F S+ + K
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
YTALI Y G D A + + M P+ T+NVL+ GL K ++ +A
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 187/434 (43%), Gaps = 29/434 (6%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
+ A FF+W S+ +GF+H+ +TY + + A+RI ++ + GI + TY
Sbjct: 5 DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
V+ L +GD+D A + EEM+ P Y + L +A D ++ M
Sbjct: 65 VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---E 121
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
N T+T++++ L +A + EA F+KM++ G P++ N+LI CK +
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDS---LLWQ-VHPQFSPEFISDNDAVEFV 282
L+L+ MKE+ LA + + F + D+ L Q V P ++ N
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT----- 236
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
L+ L + + LL + ++ +Q D T++ C + D
Sbjct: 237 -------------LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKID 283
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
AL FE + D + AY LI L K + ++ E+M + V L+
Sbjct: 284 MALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALM 343
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L R A ++ + ED+ CT TY++LI G A +++K M +GI
Sbjct: 344 DGLCKGDRLQEAQQVLETM-EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 402
Query: 460 HPSLGTFNVLLAGL 473
P++ T+N L+ G
Sbjct: 403 EPNVVTYNSLIHGF 416
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 196/444 (44%), Gaps = 26/444 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A+ + + R RG D+F+Y T++ + +I VFE D V Y+
Sbjct: 247 MDEAYELLDEM-RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L AG +D A ++E+M+ C P +V++TA M L DR++EA V + M R
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN TY+ L++ L + G+ +A E+F +M G++P+ N LI C +
Sbjct: 366 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQF-SPEFISDNDAVEF 281
+L++ M + Y + L A E + L + +F +P+ I+ +
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS----- 480
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
L+ K + + +L ++ +++ D ST++E C+
Sbjct: 481 -------------CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 527
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D A E V D + + Y +L+ K+ + +++ M K G V L
Sbjct: 528 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 587
Query: 402 IHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR-KG 458
I A +P A ++ + + Q TY +LIG + G ++A KI + + R +
Sbjct: 588 IDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDEN 647
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
+ + V++ GL + GR+S A
Sbjct: 648 CKADMFAYRVMMDGLCRTGRMSAA 671
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/512 (21%), Positives = 205/512 (40%), Gaps = 38/512 (7%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTV--NQVLKTHPPMEKAWLFFNWVSR 58
M D + ++ + +T+ + +P +W +Y V N K H + +A+L +
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEW-TYNVLINGFCKVHK-VHRAYLLLKEMKE 189
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TY+T++ F ++ + +F M E G + VTY +++ L G +D
Sbjct: 190 S-GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 248
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +EM+ + P SY M L ++ A V+++ PP+ Y+ L+
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L +AG+ +EA ++F KM+E +PD L++ CK + +L M++
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368
Query: 239 ---LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSID 293
+ Y + L +T +V D + + P ++ N + F T+ +D
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN-----GVD 423
Query: 294 QGLVLI---------------------LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
L+L+ L K + L + K D S +I
Sbjct: 424 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 483
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C R D A F+ +K + + + L+ ++EEM + S
Sbjct: 484 GGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS 543
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKI 450
VY L+ R V A ++ + + Q TYTALI + AG A ++
Sbjct: 544 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRL 603
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ M G+ P++ T+ L+ G G + +A
Sbjct: 604 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 635
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 174/429 (40%), Gaps = 53/429 (12%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + +TY +++ F + ++ + + M+E G+ + VTY++V+H V
Sbjct: 153 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKV 212
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++ +M C P +V+Y + L N + EA ++ EM +RGL P+ ++Y L
Sbjct: 213 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 272
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M L + GK + AL++F PD A + LI CKAG
Sbjct: 273 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR---------------- 316
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
EA + F+ EN + D V F T ++G
Sbjct: 317 ------LDEACKLFEKMRENSC---------------EPDVVTF-TALMDG--------- 345
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L K L +L + D++ + S++I+ C + A F+ + +
Sbjct: 346 --LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE 403
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y +LI N ++EEMT G + LI L R A ++
Sbjct: 404 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 463
Query: 418 FSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
F + + + C TY+ LIG + D A ++ M ++ + P + TF+ L+ G
Sbjct: 464 FGDM-KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 522
Query: 475 KLGRVSDAE 483
G V DAE
Sbjct: 523 NAGLVDDAE 531
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
++ + KT E LF + +++ N D TY+ ++ F + +RI + +F+ M ++
Sbjct: 448 IDGLCKTGRAPEANRLFGDM--KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
+ D VT+++++ NAG VD A + EEM +C P + +YT+ + R+ EA
Sbjct: 506 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 565
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
V K M +RG PN TYT L++ RAGK A + +M GVQP+ LI
Sbjct: 566 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGG 625
Query: 216 CCKAG---ETRTII 226
C G E R I+
Sbjct: 626 FCGTGDLEEARKIL 639
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 139/354 (39%), Gaps = 25/354 (7%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+ +Y + L R+ E + K G+ PN +TY V+++ L ++G ++A E+
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELL 82
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+M+E+G PD A N +I CKA T + R M+ + + + + + L
Sbjct: 83 EEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRL 142
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
E + ++ + T E ++ L+ K + LL
Sbjct: 143 PEATTYFAKMKKKG--------------TVPNEWTYNV---LINGFCKVHKVHRAYLLLK 185
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+ + + + ST+I C + D A F V+ Y L+ L +
Sbjct: 186 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 245
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-----SLLPEDQKCTA 429
+ E+++EM + G + L+ L + A K+F P D
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD---VV 302
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y+ LI AG D+A K+++ M P + TF L+ GL K R+ +A+
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +TYT+++D F + R+ + V + M ++G + VTYT+++ AG A +
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLL 604
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC----YTYTVLMEY 180
EEM P +++Y + + ++EA + E ++R NC + Y V+M+
Sbjct: 605 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKIL-ERLER--DENCKADMFAYRVMMDG 661
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L R G+ ALE+ ++++G P LI C+ E + +L M +R
Sbjct: 662 LCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 717
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TYT ++D F A + + + E M G+ + +TY S++ GD++
Sbjct: 575 RGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEE 634
Query: 120 AVNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A I E ++ E C + +Y M L R+ A ++ + + Q G PP Y L+
Sbjct: 635 ARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALI 694
Query: 179 EYLVRAGKYEEALEIFSKM 197
L + + +A+E+ +M
Sbjct: 695 RGLCQGKELGKAMEVLEEM 713
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I L K K E++EEM ++G + +IH L AR A F +
Sbjct: 62 YAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM- 120
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
E +K T+T +I A +A + M +KG P+ T+NVL+ G K+ +V A
Sbjct: 121 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180
Query: 483 EIYRKEKK 490
+ KE K
Sbjct: 181 YLLLKEMK 188
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 171/422 (40%), Gaps = 82/422 (19%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D FTYT+++ + + + VFE+M ++G + V+YT+++H G +D A
Sbjct: 220 GFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEA 279
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +MK C+P + +YT + + EA ++EM++ G+ PN YTYTVL++Y
Sbjct: 280 LELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDY 339
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ GK +E +E+ S M E G+ N LI+ CK G I +L MK N++
Sbjct: 340 FCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPN 399
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ E + F
Sbjct: 400 SRTYNELICGF------------------------------------------------- 410
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+KK++ +LL+ + + + + +T+I C R D A +K ++
Sbjct: 411 CRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQ 470
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+ A I L K+ + ++ E + + +L
Sbjct: 471 RTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFL----------------------- 507
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
YTALI Y A A ++K M +G P+ TFNVLL GL K G+V
Sbjct: 508 ----------YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVE 557
Query: 481 DA 482
DA
Sbjct: 558 DA 559
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ F YT ++D + +A++ S +F+ M +G +++T+ ++ L G V+ A+++
Sbjct: 504 NEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLV 563
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M + PT+ +YT ++ + A +MI G PN TYT ++ R
Sbjct: 564 DVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQ 623
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILI 213
G+ EA E+ K++E G+ D ++L+
Sbjct: 624 GRLLEAEEMVVKIKEEGILLDSFIYDVLV 652
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TYT + + R+ + + ++E+GI +D+ Y +++ G +D
Sbjct: 603 SSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLD 662
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA----------------------- 155
A + M C P+ +Y+ +K L KE
Sbjct: 663 SAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADF 722
Query: 156 ---TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
T ++++M+++G PN TY+ L++ L + A +F+ M+E+G+ P + N L
Sbjct: 723 EIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSL 782
Query: 213 IEKCCKAGETRTIILILRYMKE-NRLA 238
+ CCK G + +L M E N LA
Sbjct: 783 LSSCCKLGMHEEALRLLDSMMEYNHLA 809
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW + + + GF D+ T+ +D + ++ VFE ++EK + YT
Sbjct: 451 VDSAWRLHHLMIKD-GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYT 509
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ A A +++ M + C+P +++ + L +V++A + M +
Sbjct: 510 ALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKF 569
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
P +TYT+L+E ++R ++ A +M +G QP+ I+ C+ G
Sbjct: 570 DAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQG 624
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 193/452 (42%), Gaps = 58/452 (12%)
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++S VF +M +KG + V+YT+++H L G VD +NI+++M+ +CYPT+ +YT
Sbjct: 20 VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ LF + R EA +++ EM +RG PN +TYTV++ + + K EE I +M E G
Sbjct: 80 IVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKG 139
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADEND 258
+ P N LI+ CK G IL M N + E + F K
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199
Query: 259 SLLWQ-VHPQFSPEFISDNDAVE--------------------------------FVTTD 285
+LL + + + +P ++ N + F+ T
Sbjct: 200 ALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTL 259
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD---KSIQLD-----------------S 325
+ + ++ LK+K + A + + + ++D K+ ++D S
Sbjct: 260 CKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNS 319
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ + +I+ C R+ ALL E ++ L Y LI ++K F I+++
Sbjct: 320 STYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ 379
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGS 443
M +G+ VY+ IH + A + S++ E TYT +I Y G
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ A + K M G PS T++ L+ L K
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLK 471
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A+ N ++ + G D++TY+ +D + RI +F ++EKGI + V YT
Sbjct: 230 LDSAYRLLNLMNEN-GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYT 288
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ AG +D A ++ + M ++C P +Y A + L +V+EA + + MIQ+
Sbjct: 289 ALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK 348
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
GL TYT+L+ +++ G ++ A I +M +G QPD I C G +
Sbjct: 349 GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIK 406
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/459 (19%), Positives = 179/459 (38%), Gaps = 47/459 (10%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
S N + TY ++ F K + + M E + VTY S++H G +
Sbjct: 171 HSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYL 230
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + M P +Y+ ++ L R++EA ++ + ++G+ N YT L
Sbjct: 231 DSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTAL 290
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +AGK ++A + +M P+ + N LI+ CK + + +L++ M + L
Sbjct: 291 IDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGL 350
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
P + T + ++L + ++ + + V++ + + I +
Sbjct: 351 KCTVPTY-----TILIV----AMLKEGDFDYAHRILD-----QMVSSGYQPDVYIYTAFI 396
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII--------------------EVNCD 337
+ N+ + ++S + ++ + D+ + +I + CD
Sbjct: 397 HAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCD 456
Query: 338 HRRRDGALLAFEYSVKMDLNLER----------TAYLALIGILIKLNTFPKVAEIVEEMT 387
+ L ++ +K +L + + A + + K+ F E+ E+M
Sbjct: 457 PSHHTYSCL-IKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKML 515
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
+ G S + A LI L R A K+F + E A Y +L+ G
Sbjct: 516 EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYG 575
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
A+++ M G P L + NVL GL + G A++
Sbjct: 576 DAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKV 614
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 160/408 (39%), Gaps = 25/408 (6%)
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
DV+ A +++ M K C VSYT + L RV E +++K+M + P TYT
Sbjct: 19 DVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYT 78
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
V++ L +G+ EA+ +FS+M+E G +P+ ++I CK + IL M E
Sbjct: 79 VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138
Query: 236 RLALRYPVFKEALQTF---KVADENDSLLWQVHPQ-FSPEFISDND-------------A 278
L P + + + + + +L +H +P + N+ A
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 279 VEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
+ ++ +E L+ L+ K L + LL+ + + + D S I+
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C R + A + F + + Y ALI K +++ M
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318
Query: 395 VYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYK 452
LI L R+ A + S++ + KCT TYT LI G D A +I
Sbjct: 319 SSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILD 378
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
M G P + + + G + +AE + ++ + DAL+
Sbjct: 379 QMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALT 426
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 125/340 (36%), Gaps = 22/340 (6%)
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
LN+ V A V+ M ++G N +YT L+ L G+ +E + IF KM+E P
Sbjct: 16 LNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVR 75
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALR---YPVFKEALQTFKVADENDSLLWQV 264
+++ ++G I + M+E Y V A+ +E +L
Sbjct: 76 TYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILD-- 133
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
E V + + L+ K+ + A +L + S +
Sbjct: 134 ---------------EMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPN 178
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+ +I C + A+ ++ L Y +LI K+ ++
Sbjct: 179 ERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN 238
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
M + G + ++ I L R A +F+ L E + YTALI Y AG
Sbjct: 239 LMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAG 298
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D A + M + P+ T+N L+ GL K +V +A
Sbjct: 299 KMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEA 338
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+FE M E G + + TY ++ L G + A +++ M + P+ Y + +
Sbjct: 510 LFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCC 569
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+A + M++ G P + VL L G E+A +FS + + G D+
Sbjct: 570 ELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEV 629
Query: 208 ACNILIEKCCKAG 220
A ILI+ K G
Sbjct: 630 AWKILIDGLLKNG 642
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ ++E N ++ + A F K +Y LI L ++ + I ++M
Sbjct: 8 LGNLVEANLNNDV-NSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMR 66
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSA 444
+ V +++H L + R + A +FS + E + C TYT +I
Sbjct: 67 EDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRE-RGCEPNIHTYTVMINAMCKETKL 125
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++ +I M KG+ PS+ T+N L+ G K G V A+
Sbjct: 126 EEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQ 164
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 62/147 (42%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ + R+ + +F+ M E+G++ Y S+++ G AV + M
Sbjct: 525 TYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAM 584
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P + S L+ ++A V+ ++Q G + + +L++ L++ G
Sbjct: 585 MEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLS 644
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE 214
+ E+ M+ G Q +LIE
Sbjct: 645 DGCSELLGVMEARGCQIHPQTYRMLIE 671
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 209/476 (43%), Gaps = 22/476 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTYT+++ + + K + S VF+ M KG + V YT ++H L +D A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEA 307
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ +MK +CYPT+ +YT +K L ++R EA ++ KEM ++G+ PN +TYTVL++
Sbjct: 308 MDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDS 367
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L K E+A E+ +M E G+ P+ N LI CK G + ++ M+ L
Sbjct: 368 LCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPN 427
Query: 241 YPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVE-------FVTTDIEGPL 290
+ E ++ + V L + + P+ ++ N ++ F + L
Sbjct: 428 TRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 291 SIDQGLV--------LI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
D+GLV +I L K K + L + K + + + + +I+ C +
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
+ A L E + + + ALI L + + E+M K V +
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI 607
Query: 401 LIHRLGSARRPVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKG 458
LIHRL A + F +L K A TYT I Y G A + M G
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
+ P L T++ L+ G LGR + A + K + + + + + ++ YG
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYG 723
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 185/447 (41%), Gaps = 38/447 (8%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+TY M++ + + + ++ E G++ D TYTS++ D+D A +++E
Sbjct: 219 YTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKE 278
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M LK C V+YT + L + R+ EA D++ +M P TYTVL++ L + +
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSER 338
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EAL + +M+E G++P+ +LI+ C + +L M E L +
Sbjct: 339 KSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNA 398
Query: 247 ALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQGLVLILL 301
+ + + D D + P + N+ ++ + ++ + G++ +L
Sbjct: 399 LINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAM----GVLNKML 454
Query: 302 KKK---NLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCDHRRRD 342
++K ++V +SL+ G + D+ + D +++I+ C +R +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVE 514
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A F+ + D+ Y ALI K + ++E+M LI
Sbjct: 515 EACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 403 HRLGSARRPVPAAKIFSLLPED------QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
H L + + K +LL E Q +T T LI G D A + ++ M
Sbjct: 575 HGLCTDGK----LKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLS 630
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G P T+ + + GR+ DAE
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLQDAE 657
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 98/179 (54%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +TYT+M+D ++KR+ +F+ +++K + + V YT+++ AG V+
Sbjct: 491 RGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNE 550
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + E+M K C P +++ A + L + ++KEAT + ++M++ L P T T+L+
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIH 610
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L++ G ++ A F +M +G +PD I+ C+ G + ++ MKEN ++
Sbjct: 611 RLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS 669
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 188/469 (40%), Gaps = 51/469 (10%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TYT ++D ++ + + M EKG+ + +TY ++++ G ++
Sbjct: 352 KGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+++ E M+ + P +Y +K + V +A V +M++R + P+ TY L++
Sbjct: 412 ALDVVELMESRNLRPNTRTYNELIKG-YCKRNVHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R+G ++ A + S M + G+ PD +I+ CK+ + +++ +
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIP 530
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD---------- 285
++ + + KV + + L + P ++ N + + TD
Sbjct: 531 NVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLE 590
Query: 286 -------IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
++ +S D L+ LLK + ++ + D+ +T I+ C
Sbjct: 591 EKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYC-- 648
Query: 339 RRRDGALLAFEYSV-KMDLN---LERTAYLALIGILIKLNTFPKVAEIVEEMTKAG---- 390
R+G L E V KM N + Y +LI L +++ M G
Sbjct: 649 --REGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPS 706
Query: 391 -HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALI--GVYFSAGSADK- 446
H+ + LL + G + P + S + E ++ GV +A S +K
Sbjct: 707 QHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKL 766
Query: 447 ------------ALKIYKTMCRK-GIHPSLGTFNVLLAGLEKLGRVSDA 482
A K++ M +K GI PS FN LL+ KL + ++A
Sbjct: 767 MLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEA 815
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TYTT + + R+ + + M+E G++ D TY+S++ + G +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTN 689
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILF--LNDRVKEA----------------TDVYK 160
A + + M C P+ ++ + +K L +VK ++ +
Sbjct: 690 SAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLE 749
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILIEKCCK 218
+M++ G+ PN +Y LM + G A ++F MQ+ G+ P + N L+ CCK
Sbjct: 750 KMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCK 808
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 189/487 (38%), Gaps = 48/487 (9%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRF 67
++ IL W L +P S+ V+ + + A F +W+S++ + H +
Sbjct: 66 LFSILSKPNWHKCPSLKSMVPAISPSH-VSSLFSLDLDPKTALNFSHWISQNPRYKHSVY 124
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y ++L + + + + LM + + D+V T + L + D + + ++
Sbjct: 125 SYASLLTLLINNGYVGVVFKIRLLMIK---SCDSVADTLFVLDLCRKMNKDESFELKYKL 181
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ CY T+++ A + V E VY EM++ + PN YTY ++ + G
Sbjct: 182 IIG-CYNTLLNSLARFGL------VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNV 234
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-----KENRLALRYP 242
EEA + S + EAG+ PD LI C+ + + + + M + N +A Y
Sbjct: 235 EEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVA--YT 292
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
L + DE L + + D+D V T L+ L
Sbjct: 293 HLIHGLCVERRIDEAMDLFVK---------MKDDDCYPTVRTYTV--------LIKALCG 335
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+ +L+ + +K I+ + + +I+ C + + A ++ L
Sbjct: 336 SERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVIT 395
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA-----KI 417
Y ALI K ++VE M LI G +R V A K+
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIK--GYCKRNVHKAMGVLNKM 453
Query: 418 FS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+LP+ TY +LI +G+ D A ++ M +G+ P T+ ++ L K
Sbjct: 454 LERKVLPD----VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCK 509
Query: 476 LGRVSDA 482
RV +A
Sbjct: 510 SKRVEEA 516
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 27/244 (11%)
Query: 3 DTISNVYKILKYSTWDSA----QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR 58
DTI ++++LK +D A Q +L + K D++T ++T+ + + V++
Sbjct: 605 DTIL-IHRLLKDGDFDHAYRRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662
Query: 59 SR--GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL----- 111
+ G + D FTY++++ +G+ R +S V + M + G T+ S++ L
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKY 722
Query: 112 -------------SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
SN + D V + E+M P SY M + ++ A V
Sbjct: 723 GKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKV 782
Query: 159 YKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ M Q+ G+ P+ + L+ + K+ EA ++ M G P +C ILI +
Sbjct: 783 FDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLY 842
Query: 218 KAGE 221
K GE
Sbjct: 843 KKGE 846
>gi|413949211|gb|AFW81860.1| hypothetical protein ZEAMMB73_632535 [Zea mays]
Length = 459
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 142/310 (45%), Gaps = 81/310 (26%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLP-IKWDSYTVNQVLKTHPPMEKAWLFFNW-VSRS 59
RD IL+ +A+ LL ++P + DS+TV ++LKTHPP++KA++FF V+ S
Sbjct: 56 RDVSHRATAILRDHPCSAARPLLPSIPGLARDSHTVARMLKTHPPLQKAFIFFLLAVTAS 115
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R F HDRFTYT+M+ + GEA R+ +M + M + AV+ + + G
Sbjct: 116 RTFRHDRFTYTSMIQL-GEAGRVPAMLGLLAEM------LRAVSRPTPPPSPPSCTGSRG 168
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
ILF R +EA V+KEM+ GL P C TYT+L+E
Sbjct: 169 L------------------------ILFDFGRAEEARRVFKEMVAEGLRPTCKTYTLLIE 204
Query: 180 YLVRAGK------------------------------------------------YEEAL 191
L + +E L
Sbjct: 205 NLADTVRMKSWQPFHFVALRMYLLVHIIEEWNGYLTILEELAFYFESWTWLTPENFEATL 264
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+ K++EA V+PDKA CNIL++KC +A ET + IL+YMKE+ L P F EAL+
Sbjct: 265 DNIDKLKEACVKPDKALCNILVQKCSRACETSVLTCILQYMKEHFNVLCRPFFLEALEAL 324
Query: 252 KVADENDSLL 261
K + + + LL
Sbjct: 325 KSSGDTNELL 334
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
A IF LL D+ YTALI Y AG D AL ++ M I LGT+ VL+ GL
Sbjct: 371 APHIFGLLTADKN-VVLYTALIDAYLQAGIVDGALDLFTQMRTNRISACLGTYEVLIHGL 429
Query: 474 EKLGRVSDAEIYRKEKKSIQ 493
E G ++ YR+E+ +++
Sbjct: 430 ENAGLKQESGYYRRERMNMK 449
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 195/451 (43%), Gaps = 34/451 (7%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +T +++ KR+ V E G D VTY + L A VD A +
Sbjct: 40 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 99
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M K+C PT V+YTA + L R+ EA + ++M+++G P TYTV+++ L +A
Sbjct: 100 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKA 159
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN--------- 235
G+ EEA IF M G +PD LI K G+ ++ L M EN
Sbjct: 160 GRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPD 219
Query: 236 ----RLALRYPV----FKEALQTFKVADENDSLLWQVHPQFSPEFIS------DNDAVEF 281
L +R ++AL F DE D L H F+P + +A+ F
Sbjct: 220 VVIHNLVIRQLCASGNLEDALAYF---DELDDSLDLTHFTFNPLVAALCKAERTEEAIAF 276
Query: 282 VTTDIE----GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
V E L LV LK L L +++ D+ ++II+ C
Sbjct: 277 VKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCK 336
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
R + F + Y ALI +K PK + +M ++G +
Sbjct: 337 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 396
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTM 454
+++ L A R A F L E++ C A TY+AL+ + S G+ A+++++ M
Sbjct: 397 YNIILDGLCKAGRVAEAYATF-LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
+G P+L ++N+++ GL + G+++ A Y
Sbjct: 456 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFY 486
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+RG+ D TY ++D F +AK I V+ M + G + VTY ++ L AG V
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + M+ + C T+V+Y+A M V A ++++ M+ RG PN +Y ++
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 470
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ L RAGK +A F K+ + + PD N + C+ +T
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDT 515
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 36/202 (17%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +LD +A R++ F M+E+G VTY+++M + G+V AV ++ M
Sbjct: 396 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455
Query: 128 KLKECYPTIVSYTAYMKIL------------------------------FLN------DR 151
+ C P +VSY ++ L FL+ D
Sbjct: 456 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDT 515
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V + ++++ M+ +G PN ++Y++LM+ + RAG E LEIF +M GV PD N
Sbjct: 516 VGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNT 575
Query: 212 LIEKCCKAGETRTIILILRYMK 233
LI C AG + + R ++
Sbjct: 576 LIRWLCIAGRVDEALEVFRELE 597
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF D TYT+++D + R+ F M+ +G DAVTY +++ A +
Sbjct: 318 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPK 377
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ +M + V+Y + L RV EA + M +RG TY+ LM+
Sbjct: 378 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 437
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G A+E+F +M + G +P+ + NI+I C+AG+ + + RL
Sbjct: 438 GFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 32 DSYTVNQVL-----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
D YT N L + + LF + VS+ G + + +Y+ ++D A +
Sbjct: 498 DVYTFNSFLHGLCQRLDTVGDGVELFESMVSQ--GTSPNLHSYSILMDGICRAGGLEVTL 555
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+F M +G+ D V + +++ WL AG VD A+ ++ E++ + P SY + + L
Sbjct: 556 EIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE-RRSAPDAWSYWSLLDAL 614
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+R++EA + M +G P Y TV
Sbjct: 615 SRCERMEEARLLSFHMKLQGCAPRHYDLTV 644
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 121/325 (37%), Gaps = 54/325 (16%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ +TV++ L R + +EA + + AG +PD N+ I+ CKA
Sbjct: 39 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERV------ 92
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
+A Q K DE L P ++ T ++G
Sbjct: 93 ----------------DDAFQLLKKMDEKKCL---------PTTVT-------YTALVDG 120
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
LLK L ++L +++K + +I+ R + A F
Sbjct: 121 -----------LLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIF 169
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV----YLGALLIHR 404
+ + Y ALI L K+ + + +M + G + GV + L+I +
Sbjct: 170 VDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQ 229
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
L ++ A F L + T T+ L+ A ++A+ K M + P+L
Sbjct: 230 LCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTL 289
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKE 488
T+ L+ G KLGR+ +A + KE
Sbjct: 290 FTYTSLVDGFLKLGRLDEALLQLKE 314
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 201/459 (43%), Gaps = 33/459 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D + +TT ++ F + ++ +F M+E G+ + VTY +V+ L +G D
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A E+M + PT+++Y+ +K L R+ +A V KEM ++G PPN Y L++
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 365
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L+ AG +A+EI M G+ + N LI+ CK+G+ +L+ M +
Sbjct: 366 SLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN--DAVEFVTTDIEGPLSIDQG-- 295
F + DS L +F E + N +TT I G +
Sbjct: 426 NQGSFTSVICLLCSHHMFDSAL-----RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 480
Query: 296 ---LVLILLKKKNLV---AIDSLLSG----------------IMDKSIQLDSAVISTIIE 333
L L L K LV ++LL G I+ + +D +T+I
Sbjct: 481 AVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLIS 540
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C +++ D A + + VK L + Y LI L+ +N + + + + G
Sbjct: 541 GCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIP 600
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
VY +++I A R K+F + + Q T Y LIG Y +G AL++
Sbjct: 601 DVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELR 660
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
+ M KGI P+ T+ L+ G+ + RV +A++ +E +
Sbjct: 661 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMR 699
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 14/243 (5%)
Query: 29 IKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+K D+YT + +++ M E+A F+ R+ G D +TY+ M+D +A+R
Sbjct: 563 LKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRN-GMIPDVYTYSVMIDGCCKAERTEEG 621
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ +F+ M + + V Y ++ +G + A+ + E+MK K P +YT+ +K
Sbjct: 622 QKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 681
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ + RV+EA + +EM GL PN + YT L++ + G+ + + +M V P+
Sbjct: 682 MSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 741
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE----------ALQTFKVAD 255
K ++I + G +L M+E + +KE LQ FK +D
Sbjct: 742 KITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSD 801
Query: 256 END 258
E +
Sbjct: 802 EEN 804
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 183/468 (39%), Gaps = 68/468 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF + Y ++D EA ++ + +LM KG+++ + TY +++ +G D
Sbjct: 351 KGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADI 410
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +EM S+T+ + +L + A EM+ R + P T L+
Sbjct: 411 AERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLIS 470
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + GK+ +A+E++ K G D N L+ C+AG +L
Sbjct: 471 GLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAG---------------KLEE 515
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + KE L F+ D + + + G +D+ + +
Sbjct: 516 GFRIQKEIL--------------------GRGFVMDRVSYNTLISGCCGNKKLDEAFMFM 555
Query: 300 -LLKKKNL--------VAIDSLLS-GIMDKSIQL-----------DSAVISTIIEVNCDH 338
+ KK L + I LL+ ++++IQ D S +I+ C
Sbjct: 556 DEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKA 615
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS------ 392
R + F+ + +L Y LIG + E+ E+M G S
Sbjct: 616 ERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATY 675
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
+ G +I R+ A+ + ++ L P YTALI Y G K + +
Sbjct: 676 TSLIKGMSIISRVEEAKLLLEEMRMEGLEPN----VFHYTALIDGYGKLGQMVKVECLLR 731
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
M K +HP+ T+ V++ G + G V++A ++ +K I D+++
Sbjct: 732 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSIT 779
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 165/388 (42%), Gaps = 35/388 (9%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ + K +P+ + + L ++ + + ++ +G+ P+ Y +T +
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAIN 260
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
+ GK EEA+E+FSKM+EAGV P+ N +I+ +G + M E +
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEP 320
Query: 239 --LRYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y + + L K + D L F P I N+ ++ + I+ G
Sbjct: 321 TLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSL---------IEAG 371
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ ++ K+L ++ K + L S+ +T+I+ C + D A + + +
Sbjct: 372 SLNKAIEIKDL---------MVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIG 422
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
N+ + ++ ++I +L + F V EM S G L LI L + A
Sbjct: 423 FNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAV 482
Query: 416 KIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
+++ L + T T AL+ AG ++ +I K + +G ++N L
Sbjct: 483 ELWLKFLNKGFLVD----TKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTL 538
Query: 470 LAGLEKLGRVSDAEIYRKE--KKSIQAD 495
++G ++ +A ++ E KK ++ D
Sbjct: 539 ISGCCGNKKLDEAFMFMDEMVKKGLKPD 566
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 4/178 (2%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H + WL F ++GF D T +L EA ++ + + + +G +D V
Sbjct: 478 HSKAVELWLKF----LNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRV 533
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
+Y +++ +D A +EM K P +Y+ ++ L ++V+EA + +
Sbjct: 534 SYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDC 593
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ G+ P+ YTY+V+++ +A + EE ++F +M +QP+ N LI C++G
Sbjct: 594 KRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSG 651
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 165/432 (38%), Gaps = 28/432 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY T++ + ++ + + + + M G N++ ++TSV+ L + D
Sbjct: 385 SKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFD 444
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ EM L+ P T + L + + +A +++ + + +G + T L+
Sbjct: 445 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALL 504
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L AGK EE I ++ G D+ + N LI CC + + + M + L
Sbjct: 505 HGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLK 564
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y + L +E + +F D + + ID
Sbjct: 565 PDNYTYSILIRGLLNMNKVEE------------AIQFWGDCKRNGMIPDVYTYSVMIDG- 611
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K + L +M ++Q ++ V + +I C R AL E
Sbjct: 612 ----CCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKG 667
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
++ Y +LI + ++ + ++EEM G V+ LI G + V
Sbjct: 668 ISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMV--- 724
Query: 416 KIFSLLPEDQKCTA-----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
K+ LL E TYT +IG Y G+ +A ++ M KGI P T+ +
Sbjct: 725 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFI 784
Query: 471 AGLEKLGRVSDA 482
G K G V A
Sbjct: 785 YGYLKQGGVLQA 796
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 21/223 (9%)
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST--------------- 330
++ LS +VLI L N+ + G+ D + + A+ S
Sbjct: 126 LDANLSSPARVVLIRLINGNVPVLPCGNGGLRDSRVAIADAMASLSLCFDEEIRRKMSDL 185
Query: 331 IIEVNCDHRRRDGALLA---FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+IEV C +RDG LA F + +T L+ L++ F K E +
Sbjct: 186 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVC 245
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSAD 445
K G S VYL I+ + A ++FS + E TY +I +G D
Sbjct: 246 K-GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYD 304
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+A + M +G+ P+L T+++L+ GL K R+ DA KE
Sbjct: 305 EAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKE 347
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 185/428 (43%), Gaps = 30/428 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D F+Y T++ E+ + + E M EK D VTY S+M +D A
Sbjct: 227 GREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEA 286
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ E+M + C PT+++YT + DR+ +A V ++M + G+ P+ TY L++
Sbjct: 287 ERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDG 346
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +AGK EEA E+ M E PD +IL+ CK G+ L+L M E
Sbjct: 347 LCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPN 406
Query: 241 YPVFKEALQTFKVA---DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
F + F A DE +L + E D V + +T I+G +
Sbjct: 407 LVTFNTMIDGFCKAGKVDEGHKVL-----ELMKEVSCTPDVVTY-STLIDGYCKAN---- 456
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ ++ AI I D A S+++E C + + A + K
Sbjct: 457 ----RMQDAFAI---------LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCP 503
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ Y +IG L + + ++++ M++ G +Y ++LI+ L +R A +
Sbjct: 504 PTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINV 563
Query: 418 FSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
++ E + C ATYT+LI + D A + +KTM G P +N+L++G
Sbjct: 564 LDVMLE-KGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFC 622
Query: 475 KLGRVSDA 482
+ G V A
Sbjct: 623 QSGNVEKA 630
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 187/443 (42%), Gaps = 33/443 (7%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y ++ + +I + + V ++M E+ D +TYTS++ +D A +
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+MK P V+Y A + L ++++E + + +EM++ G P+ ++Y ++ L +
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
GKYEEA +I KM E PD N L++ CK + +L M R A +
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305
Query: 245 KEALQTFKVADENDSLLWQVHPQF----SPEFISDN-------------DAVEFVTTDIE 287
+ F AD + F SP+ ++ N +A E + +E
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365
Query: 288 GPLSIDQGLVLILLKK-KNLVAIDS---LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ D IL+ L +D LL ++++ Q + +T+I+ C + D
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE-EMTKAGHSLGVYLGALLI 402
E ++ + Y LI K N I+ KA +S ++
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYS-------SML 478
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGI 459
L S + A ++ L+ + Q C T Y +IG D+ALK+ + M +G
Sbjct: 479 EGLCSTGKVEEAQEVMDLMTK-QGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGC 537
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA 482
P+L T+++L+ GL K RV DA
Sbjct: 538 EPNLYTYSILINGLCKTKRVEDA 560
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 92/174 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D+ +Y++ML+ ++ + V +LM ++G + Y ++ L + D A
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEA 525
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + + M + C P + +Y+ + L RV++A +V M+++G P+ TYT L++
Sbjct: 526 LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ K + A + F M+++G +PDK A NILI C++G I +++ M E
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLE 639
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 175/453 (38%), Gaps = 46/453 (10%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDA 101
P+E + FF R R + + + +T + R + K V E+ E + + D
Sbjct: 5 PLE-GYSFF----RERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDV 59
Query: 102 VTYTSVMHWLSNAGDVDGAVN-----IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
+T+ +++ GD+D A++ +W C PT +Y + L R+ EA
Sbjct: 60 ITHNTILKAYCQIGDLDRALSHFRGKMW-------CSPTAFTYCILIHGLCQCQRIDEAY 112
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ EMIQ+ P+ Y L+ L + GK + A + M E PD LI C
Sbjct: 113 QLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGC 172
Query: 217 CKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEF 272
C+ ++ MKE+ L + Y L +E LL + V P+
Sbjct: 173 CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
S N +V L + +L +++K D ++++
Sbjct: 233 FSYNT------------------VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM 274
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C + D A E V Y LIG + + ++E+M KAG S
Sbjct: 275 DGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGIS 334
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALK 449
+ L+ L A + A ++ ++ E + C TY+ L+ G D A
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVE-KDCAPDVVTYSILVNGLCKLGKVDDARL 393
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + M +G P+L TFN ++ G K G+V +
Sbjct: 394 LLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEG 426
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 139/340 (40%), Gaps = 24/340 (7%)
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
R E ++E P+ TY L+ RAG + LEI ++M PD N
Sbjct: 4 RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63
Query: 211 ILIEKCCKAGE-TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
+++ C+ G+ R + M + A Y + L + DE LL
Sbjct: 64 TILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLD------- 116
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
E + D ++ L+ L K + A ++L ++++S D +
Sbjct: 117 ----------EMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYT 166
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++I C D A E + L + AY AL+ L K N +V++++EEM +A
Sbjct: 167 SLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA 226
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADK 446
G + ++ L + + A KI + E +KC TY +L+ + D+
Sbjct: 227 GREPDTFSYNTVVACLCESGKYEEAGKILEKMIE-KKCGPDVVTYNSLMDGFCKVSKMDE 285
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
A ++ + M + P++ T+ L+ G + R++DA YR
Sbjct: 286 AERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA--YR 323
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 94/208 (45%), Gaps = 4/208 (1%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRS 59
D ++ I Y + QD L I D + + +L+ + +E+A + +++
Sbjct: 441 DVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTK- 499
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G Y ++ + +R + ++M E+G + TY+ +++ L V+
Sbjct: 500 QGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVED 559
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+N+ + M K C P + +YT+ + +++ A +K M G P+ Y +L+
Sbjct: 560 AINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILIS 619
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++G E+A+E+ M E G PD A
Sbjct: 620 GFCQSGNVEKAIEVMQLMLEKGCNPDAA 647
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V RG + +TY+ +++ + KR+ V ++M EKG D TYTS++
Sbjct: 531 VMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKIN 590
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+D A ++ M+ C P ++Y + + V++A +V + M+++G P+ TY
Sbjct: 591 KMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYF 650
Query: 176 VLMEYLV 182
LM L
Sbjct: 651 SLMRSLT 657
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 120/230 (52%), Gaps = 1/230 (0%)
Query: 5 ISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV IL+ W +A++ L NL D Y NQVLK A FF W+ R GFN
Sbjct: 318 VENVAHILRQIRWGPAAEEALANLNYSMDPYQANQVLKQLQDHTVALNFFYWLKRQPGFN 377
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTTM+ I G AK+ ++ + + M + G + VTY ++H A ++ AV++
Sbjct: 378 HDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDV 437
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM+ C P V+Y + I + A ++Y+ M GL P+ +TY+V++ L +
Sbjct: 438 FNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGK 497
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
AG A ++F +M E G P+ NI+I KA ++ + + R M+
Sbjct: 498 AGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQ 547
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
FN + R G DR TY T++DI +A + +++ MQ G++ D TY+ +++ L
Sbjct: 438 FNEMQRV-GCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLG 496
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG + A ++ EM + C P +V+Y + + + A +Y++M G P+
Sbjct: 497 KAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKV 556
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY+++ME L G +EA +FS+M+ PD+ +L++ KAG + M
Sbjct: 557 TYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTM 616
Query: 233 KENRLALRYPVFKEALQTF----KVAD 255
L P L F K+AD
Sbjct: 617 LNTGLRPNVPTCNSLLSAFLRVHKLAD 643
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ + +A+ S ++ MQ G D VTY+ VM L + G +D A ++ EM
Sbjct: 522 TYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEM 581
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K P Y + + V++A Y+ M+ GL PN T L+ +R K
Sbjct: 582 KRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKL 641
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+A + M E G+ P +L+ C +A
Sbjct: 642 ADAYNLLQSMLELGLNPSLQTYTLLLSCCTEA 673
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 4/198 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V IL + K AI+ LL ++ Q + + +I + A+ F ++
Sbjct: 386 MVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVG 445
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K E+ + M AG S + +++I+ LG A A
Sbjct: 446 CEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAH 505
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F + E Q C TY +I + A + ALK+Y+ M G P T+++++
Sbjct: 506 KLFCEMVE-QGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEV 564
Query: 473 LEKLGRVSDAEIYRKEKK 490
L G + +AE E K
Sbjct: 565 LGHCGYLDEAEAVFSEMK 582
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 346 LAFEYSVKMD--LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
L F Y +K N + Y ++GIL + F + +++++M K G V LIH
Sbjct: 364 LNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIH 423
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
G A A +F+ + + C TY LI ++ AG D AL++Y+ M G+
Sbjct: 424 SYGRANYLNDAVDVFNEM-QRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLS 482
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P T++V++ L K G ++ A
Sbjct: 483 PDTFTYSVIINCLGKAGHLAAAH 505
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S GF D+ TY+ ++++ G + + VF M+ K D Y ++ AG+V
Sbjct: 547 QSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNV 606
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++ M P + + + + ++ +A ++ + M++ GL P+ TYT+L
Sbjct: 607 EKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLL 666
Query: 178 MEYLVRA 184
+ A
Sbjct: 667 LSCCTEA 673
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--- 419
Y +I + K + ++ +M AG ++++ LG A +FS
Sbjct: 523 YNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMK 582
Query: 420 ---LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+P++ Y L+ ++ AG+ +KA + Y+TM G+ P++ T N LL+ ++
Sbjct: 583 RKNWVPDE----PVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRV 638
Query: 477 GRVSDA 482
+++DA
Sbjct: 639 HKLADA 644
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 195/444 (43%), Gaps = 26/444 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A+ + + R RG D+F+Y T++ + +I VFE D V Y+
Sbjct: 128 MDEAYELLDEM-RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L G +D A ++E+M+ C P +V++TA M L DR++EA V + M R
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 246
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN TY+ L++ L + G+ +A E+F +M G++P+ N LI C +
Sbjct: 247 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQF-SPEFISDNDAVEF 281
+L++ M + Y + L A E + L + +F +P+ I+ +
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS----- 361
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
L+ K + + +L ++ +++ D ST++E C+
Sbjct: 362 -------------CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 408
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D A E V D + + Y +L+ K+ + +++ M K G V L
Sbjct: 409 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 468
Query: 402 IHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR-KG 458
I A +P A K+ + + Q TY +LIG + G ++A K+ + + R +
Sbjct: 469 IDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDEN 528
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
+ + V++ GL + GR+S A
Sbjct: 529 CKADMFAYRVMMDGLCRTGRMSAA 552
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 184/453 (40%), Gaps = 26/453 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + +TY +++ F + ++ + + M+E G+ + VTY++V+H V
Sbjct: 34 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKV 93
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++ +M C P +V+Y + L N + EA ++ EM +RGL P+ ++Y L
Sbjct: 94 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 153
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M L + GK + AL++F PD A + LI CK G + M+EN
Sbjct: 154 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSC 213
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
F + D Q E + D + V T L+
Sbjct: 214 EPDVVTFTALMDGLCKGDRLQ------EAQQVLETMEDRNCTPNVIT--------YSSLI 259
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L K + + ++ + I+ + +++I C D ALL E
Sbjct: 260 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 319
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ Y LI L K P+ + +M + V + LI R A +
Sbjct: 320 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 379
Query: 418 F------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
F ++LP+ T++ L+ Y +AG D A ++ + M P + T+ L+
Sbjct: 380 FDDMLKQAVLPD----VVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435
Query: 472 GLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
G K+GR+ +A + R K+ Q + ++ A+
Sbjct: 436 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 468
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 178/426 (41%), Gaps = 30/426 (7%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+T M+D +A R+ F M++KG + TY +++ V A + +E
Sbjct: 8 ITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKE 67
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK P +V+Y+ + +V A ++++M++ G PN TY L+ L R G
Sbjct: 68 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 127
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA------LR 240
+EA E+ +M+E G+QPDK + + L+ CK G+ I + L+ ++N +
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK---IDMALKVFEDNSNGDCPPDVVA 184
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
Y L DE L ++ E + D V F T ++G L
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMR-----ENSCEPDVVTF-TALMDG-----------L 227
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K L +L + D++ + S++I+ C + A F+ + +
Sbjct: 228 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 287
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y +LI N ++EEMT G + LI L R A ++F
Sbjct: 288 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD 347
Query: 421 LPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ + + C TY+ LIG + D A ++ M ++ + P + TF+ L+ G G
Sbjct: 348 M-KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAG 406
Query: 478 RVSDAE 483
V DAE
Sbjct: 407 LVDDAE 412
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 140/349 (40%), Gaps = 59/349 (16%)
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
EC ++++T + L +R+ EAT + +M ++G PN +TY VL+ + K A
Sbjct: 2 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEA 247
+ +M+E+G+ P+ + +I C+ + T + R M EN + Y
Sbjct: 62 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
L + DE LL ++ ++GL + +
Sbjct: 122 LCRNGLMDEAYELLDEMR---------------------------ERGL------QPDKF 148
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ D+L++G+ C + D AL FE + D + AY LI
Sbjct: 149 SYDTLMAGL-------------------CKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 189
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L K + ++ E+M + V L+ L R A ++ + ED+ C
Sbjct: 190 AGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM-EDRNC 248
Query: 428 TA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
T TY++LI G A +++K M +GI P++ T+N L+ G
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +TYT+++D F + R+ + V + M ++G + VTYT+++ AG A +
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLL 485
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLPPNC----YTYTVLME 179
EEM P +++Y + + ++EA ++M++R NC + Y V+M+
Sbjct: 486 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEA----RKMLERLERDENCKADMFAYRVMMD 541
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L R G+ ALE+ ++++G P LI C+ E + +L M +R
Sbjct: 542 GLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 598
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TYT ++D F A + + + E M G+ + +TY S++ GD++
Sbjct: 456 RGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEE 515
Query: 120 AVNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + E ++ E C + +Y M L R+ A ++ + + Q G PP Y L+
Sbjct: 516 ARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALI 575
Query: 179 EYLVRAGKYEEALEIFSKM 197
L + + +A+E+ +M
Sbjct: 576 RGLCQGKELGKAMEVLEEM 594
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 36/276 (13%)
Query: 5 ISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV +IL+ +W +A++ L+NL D+Y NQVLK A FF W+ R GF
Sbjct: 326 VENVSRILRQLSWGPAAEEALRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLKRQTGFK 385
Query: 64 HDRFTYTTMLDIFGEAKRISSMK-----------------------------------YV 88
HD TYTTM+ I G A++ ++ V
Sbjct: 386 HDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSV 445
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ MQE G D VTY +++ + AG +D A++++++M+ P +Y+ + L
Sbjct: 446 FDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGK 505
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ A ++ EM+ +G PN TY +++ +A Y ALE++ MQ AG QPDK
Sbjct: 506 AGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVT 565
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+I++E G I MK PV+
Sbjct: 566 YSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVY 601
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY T++DI +A + ++++ MQE ++ D TY+ +++ L AG + A
Sbjct: 453 GCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSA 512
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM + C P +V+Y + + A ++Y++M G P+ TY+++ME
Sbjct: 513 HKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEV 572
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G EEA IF++M+ PD+ +L++ K G + M L
Sbjct: 573 LGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPN 632
Query: 241 YPVFKEALQTF 251
P L F
Sbjct: 633 VPTCNSLLSAF 643
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ + +A+ + ++ MQ G D VTY+ VM L + G ++ A I+ EM
Sbjct: 530 TYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEM 589
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K P Y + + V+++ + Y+ M+ GL PN T L+ +R +
Sbjct: 590 KRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRL 649
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+A + M G+QP +L+ C +A
Sbjct: 650 SDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEA 681
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 4/198 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V IL + + AI+ LL+ ++ Q + + +I + A+ F+ +
Sbjct: 394 MVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAG 453
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K + ++M +A S + +++I+ LG A A
Sbjct: 454 CQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAH 513
Query: 416 KIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F + DQ C TY +I + A + AL++Y+ M G P T+++++
Sbjct: 514 KLFCEM-VDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEV 572
Query: 473 LEKLGRVSDAEIYRKEKK 490
L G + +AE E K
Sbjct: 573 LGHCGHLEEAEAIFTEMK 590
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 59/127 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ GF D+ TY+ ++++ G + + +F M+ K D Y ++ G+V
Sbjct: 555 QNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNV 614
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + ++ M P + + + + R+ +A ++ + M++ GL P+ TYT+L
Sbjct: 615 EKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLL 674
Query: 178 MEYLVRA 184
+ A
Sbjct: 675 LSCCTEA 681
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 36/276 (13%)
Query: 5 ISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV +IL+ +W +A++ L+NL D+Y NQVLK A FF W+ R GF
Sbjct: 317 VENVSRILRQLSWGPAAEEALRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLKRQTGFK 376
Query: 64 HDRFTYTTMLDIFGEAKRISSMK-----------------------------------YV 88
HD TYTTM+ I G A++ ++ V
Sbjct: 377 HDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSV 436
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ MQE G D VTY +++ + AG +D A++++++M+ P +Y+ + L
Sbjct: 437 FDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGK 496
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ A ++ EM+ +G PN TY +++ +A Y ALE++ MQ AG QPDK
Sbjct: 497 AGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVT 556
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+I++E G I MK PV+
Sbjct: 557 YSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVY 592
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY T++DI +A + ++++ MQE ++ D TY+ +++ L AG + A
Sbjct: 444 GCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSA 503
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM + C P +V+Y + + A ++Y++M G P+ TY+++ME
Sbjct: 504 HKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEV 563
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G EEA IF++M+ PD+ +L++ K G + M L
Sbjct: 564 LGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPN 623
Query: 241 YPVFKEALQTF 251
P L F
Sbjct: 624 VPTCNSLLSAF 634
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ + +A+ + ++ MQ G D VTY+ VM L + G ++ A I+ EM
Sbjct: 521 TYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEM 580
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K P Y + + V+++ + Y+ M+ GL PN T L+ +R +
Sbjct: 581 KRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRL 640
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+A + M G+QP +L+ C +A
Sbjct: 641 SDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEA 672
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 4/198 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V IL + + AI+ LL+ ++ Q + + +I + A+ F+ +
Sbjct: 385 MVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAG 444
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K + ++M +A S + +++I+ LG A A
Sbjct: 445 CQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAH 504
Query: 416 KIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F + DQ C TY +I + A + AL++Y+ M G P T+++++
Sbjct: 505 KLFCEM-VDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEV 563
Query: 473 LEKLGRVSDAEIYRKEKK 490
L G + +AE E K
Sbjct: 564 LGHCGHLEEAEAIFTEMK 581
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 57/124 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D+ TY+ ++++ G + + +F M+ K D Y ++ G+V+ +
Sbjct: 549 GFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKS 608
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M P + + + + R+ +A ++ + M++ GL P+ TYT+L+
Sbjct: 609 WEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSC 668
Query: 181 LVRA 184
A
Sbjct: 669 CTEA 672
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 122/231 (52%), Gaps = 1/231 (0%)
Query: 5 ISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV +L+ W +A++ L+NL ++ D+Y NQVLK A FF W+ R GF
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTTM+ G AK+ ++ + + M G + VTY ++H A ++ A+N+
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ +M+ C P V+Y + I + A D+Y+ M GL P+ +TY+V++ L +
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AG A ++F +M + G P+ NI+++ KA ++ + + R M+
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQN 532
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A FN + + G DR TY T++DI +A + +++ MQ G++ D TY+
Sbjct: 415 LNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L AG + A ++ EM + C P +V+Y M + + A +Y++M
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNA 533
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ TY+++ME L G EEA +F++MQ+ PD+ +L++ KAG
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 226 ILILRYMKENRLALRYPVFKEALQTF 251
+ M L P L TF
Sbjct: 594 WQWYQAMLHAGLLPNVPTCNSLLSTF 619
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 7/191 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY+ +++ G+A + + +F M ++G + VTY +M + A + A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSA 523
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +M+ P V+Y+ M++L ++EA V+ EM Q+ P+ Y +L++
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AG E+A + + M AG+ P+ CN L+ + + +L +N LAL
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELL----QNMLALG 639
Query: 241 YPVFKEALQTF 251
+ +LQT+
Sbjct: 640 ---LRPSLQTY 647
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY M+D+ +A+ S ++ MQ G D VTY+ VM L + G ++
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM+ K P Y + + V++A Y+ M+ GL PN T L+
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLS 617
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+R K EA E+ M G++P +L+ CC G ++
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V L + K AI+ LL ++ Q ++ + +I + A+ F +
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K ++ + M G S + +++I+ LG A A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F + DQ CT TY ++ ++ A + ALK+Y+ M G P T+++++
Sbjct: 490 KLFCEM-VDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 473 LEKLGRVSDAE 483
L G + +AE
Sbjct: 549 LGHCGYLEEAE 559
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 343 GALLAFEYSVKMDLNLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
G L F Y +K + Y ++G L + F + ++++EM + G
Sbjct: 345 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 404
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRK 457
LIH G A A +F+ + ++ C TY LI ++ AG D A+ +Y+ M
Sbjct: 405 LIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ P T++V++ L K G + A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAH 489
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 121/231 (52%), Gaps = 1/231 (0%)
Query: 5 ISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV +L+ W +A++ L+NL ++ D+Y NQVLK A FF W+ R GF
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTTM+ G AK+ ++ + + M G + VTY ++H A ++ A+N+
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ +M+ C P V+Y + I + A D+Y+ M GL P+ +TY+V++ L +
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AG A ++F +M + G P+ NI+++ KA + + + R M+
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A FN + + G DR TY T++DI +A + +++ MQ G++ D TY+
Sbjct: 415 LNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L AG + A ++ EM + C P +V+Y M + + A +Y++M
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ TY+++ME L G EEA +F++MQ+ PD+ +L++ KAG
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 226 ILILRYMKENRLALRYPVFKEALQTF 251
+ M L P L TF
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTF 619
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY M+D+ +A+ + ++ MQ G D VTY+ VM L + G ++
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM+ K P Y + + V++A Y+ M+ GL PN T L+
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+R K EA E+ M G++P +L+ CC G ++
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V L + K AI+ LL ++ Q ++ + +I + A+ F +
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K ++ + M G S + +++I+ LG A A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F + DQ CT TY ++ ++ A + ALK+Y+ M G P T+++++
Sbjct: 490 KLFCEM-VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 473 LEKLGRVSDAE 483
L G + +AE
Sbjct: 549 LGHCGYLEEAE 559
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 343 GALLAFEYSVKMDLNLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
G L F Y +K + Y ++G L + F + ++++EM + G
Sbjct: 345 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 404
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRK 457
LIH G A A +F+ + ++ C TY LI ++ AG D A+ +Y+ M
Sbjct: 405 LIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ P T++V++ L K G + A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAH 489
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 121/231 (52%), Gaps = 1/231 (0%)
Query: 5 ISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV +L+ W +A++ L+NL ++ D+Y NQVLK A FF W+ R GF
Sbjct: 419 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 478
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTTM+ G AK+ ++ + + M G + VTY ++H A ++ A+N+
Sbjct: 479 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 538
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ +M+ C P V+Y + I + A D+Y+ M GL P+ +TY+V++ L +
Sbjct: 539 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 598
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AG A ++F +M + G P+ NI+++ KA + + + R M+
Sbjct: 599 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 649
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A FN + + G DR TY T++DI +A + +++ MQ G++ D TY+
Sbjct: 532 LNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 590
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L AG + A ++ EM + C P +V+Y M + + A +Y++M
Sbjct: 591 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 650
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ TY+++ME L G EEA +F++MQ+ PD+ +L++ KAG
Sbjct: 651 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 710
Query: 226 ILILRYMKENRLALRYPVFKEALQTF 251
+ M L P L TF
Sbjct: 711 WQWYQAMLHAGLRPNVPTCNSLLSTF 736
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY M+D+ +A+ + ++ MQ G D VTY+ VM L + G ++
Sbjct: 615 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 674
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM+ K P Y + + V++A Y+ M+ GL PN T L+
Sbjct: 675 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 734
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+R K EA E+ M G++P +L+ CC G ++
Sbjct: 735 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 777
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V L + K AI+ LL ++ Q ++ + +I + A+ F +
Sbjct: 487 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 546
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K ++ + M G S + +++I+ LG A A
Sbjct: 547 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 606
Query: 416 KIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F + DQ CT TY ++ ++ A + ALK+Y+ M G P T+++++
Sbjct: 607 KLFCEM-VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 665
Query: 473 LEKLGRVSDAE 483
L G + +AE
Sbjct: 666 LGHCGYLEEAE 676
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 343 GALLAFEYSVKMDLNLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
G L F Y +K + Y ++G L + F + ++++EM + G
Sbjct: 462 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 521
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRK 457
LIH G A A +F+ + ++ C TY LI ++ AG D A+ +Y+ M
Sbjct: 522 LIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 580
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ P T++V++ L K G + A
Sbjct: 581 GLSPDTFTYSVIINCLGKAGHLPAAH 606
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 121/231 (52%), Gaps = 1/231 (0%)
Query: 5 ISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV +L+ W +A++ L+NL ++ D+Y NQVLK A FF W+ R GF
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTTM+ G AK+ ++ + + M G + VTY ++H A ++ A+N+
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ +M+ C P V+Y + I + A D+Y+ M GL P+ +TY+V++ L +
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AG A ++F +M + G P+ NI+++ KA + + + R M+
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQN 532
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A FN + + G DR TY T++DI +A + +++ MQ G++ D TY+
Sbjct: 415 LNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L AG + A ++ EM + C P +V+Y M + + A +Y++M
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ TY+++ME L G EEA +F++MQ+ PD+ +L++ KAG
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 226 ILILRYMKENRLALRYPVFKEALQTF 251
+ M L P L TF
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTF 619
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY M+D+ +A+ + ++ MQ G D VTY+ VM L + G ++
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM+ K P Y + + V++A Y+ M+ GL PN T L+
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+R K EA E+ M G++P +L+ CC G ++
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V L + K AI+ LL ++ Q ++ + +I + A+ F +
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K ++ + M G S + +++I+ LG A A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F + DQ CT TY ++ ++ A + ALK+Y+ M G P T+++++
Sbjct: 490 KLFCEM-VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 473 LEKLGRVSDAE 483
L G + +AE
Sbjct: 549 LGHCGYLEEAE 559
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 343 GALLAFEYSVKMDLNLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
G L F Y +K + Y ++G L + F + ++++EM + G
Sbjct: 345 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 404
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRK 457
LIH G A A +F+ + ++ C TY LI ++ AG D A+ +Y+ M
Sbjct: 405 LIHSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ P T++V++ L K G + A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAH 489
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 185/435 (42%), Gaps = 30/435 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY TM++ ++ R+ + E M + G + +Y +V+H A V+ A+ +
Sbjct: 229 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLL 288
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+M + C P +VSYT + L D+V EA V +MIQRG PN TY L++ R
Sbjct: 289 EQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRV 348
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
G + A+E+ KM E G +P+ N ++ C+ + +L+ M + A+ Y
Sbjct: 349 GDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINY 408
Query: 242 PVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ K+ + +D L + P+ V ++T I+ L
Sbjct: 409 STIISGFCKAGKLREAHDLLEQMIRRGCRPD-------VACLSTLIDA-----------L 450
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K + + LL + D S +I C +R A + VK +
Sbjct: 451 CKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDV 510
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y +++ L K + + M AG V +++IH A K+
Sbjct: 511 VTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLER 570
Query: 421 LPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E KC TY+ALI AG+ DKA +++ M G P+L T+N L+ GL K+
Sbjct: 571 MKE-AKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKIN 629
Query: 478 RVSDA----EIYRKE 488
+V A EI RK+
Sbjct: 630 KVEQAAEMLEIMRKQ 644
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 187/451 (41%), Gaps = 28/451 (6%)
Query: 50 WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMH 109
WL V+R G D +YTT+++ + ++ V + M ++G + +TY +++
Sbjct: 286 WLLEQMVTR--GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVD 343
Query: 110 WLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
GD+DGAV + +M + P ++Y M + + ++ A V + MIQ G PP
Sbjct: 344 GFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPP 403
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ Y+ ++ +AGK EA ++ +M G +PD A + LI+ CKA + +L
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463
Query: 230 RY---MKENRLALRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTD 285
R M + Y + AL K E +S L V + P+ ++ N V+
Sbjct: 464 RMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDG---- 519
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
L K + + L + + D S +I C D A
Sbjct: 520 --------------LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAF 565
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
E + + Y ALI L K T K ++ +EM G + + LI L
Sbjct: 566 KMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGL 625
Query: 406 GSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
+ AA++ ++ Q CT TYT LI +A ++A ++ + M KG P
Sbjct: 626 CKINKVEQAAEMLEIM-RKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPD 684
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
T+ LL L+K + E KE ++ +
Sbjct: 685 RMTYGTLLRALQKTNNLELVEQLLKEMEATE 715
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 206/508 (40%), Gaps = 71/508 (13%)
Query: 8 VYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRG 61
++ + + +A +LLK +P + + N V+K + ++ A F + S
Sbjct: 884 IHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D FTY+T++D ++ ++ + E M KG + + VTY+S++H L AG +D A
Sbjct: 944 CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 1003
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ + M C P IV+Y + R+ EA + +EM+ G PN TYTVL++
Sbjct: 1004 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAF 1063
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---A 238
+ GK E+A+ + M E G P+ N L++ CK E +L M +
Sbjct: 1064 CKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 1123
Query: 239 LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ Y L E LL Q + P+ ++ N ++ + +D
Sbjct: 1124 VSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYR----VDIAYE 1179
Query: 298 LILLKKK-----NLVAIDSLLSGIMDKSIQLDSA------------------VISTIIEV 334
L L ++ NLV +SL+ G+ KS + D A +T+I+
Sbjct: 1180 LFNLIQESGCTPNLVTYNSLVHGLC-KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 1238
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C +R D A F + L + Y +I L K + ++E M K G G
Sbjct: 1239 LCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPG 1298
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
TY LI + G+ DKAL+I + +
Sbjct: 1299 AI---------------------------------TYGTLIDGFCKTGNLDKALEILQLL 1325
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KG +P + TF++ + L K GR+ A
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLRQA 1353
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 194/450 (43%), Gaps = 41/450 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G+ + FTY ++LD+F + + + M +KG + V+Y +V+ L A V
Sbjct: 1082 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 1141
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
V + E+M C P IV++ + + RV A +++ + + G PN TY L+
Sbjct: 1142 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 1201
Query: 180 YLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L ++ ++++A + +M ++ G PD N +I+ CK+ + M + LA
Sbjct: 1202 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 1261
Query: 239 ---LRYPVFKEALQTFKVADE-NDSLLWQVHPQFSPEFISDNDAVEFV--TTDIEGPLSI 292
+ Y + +L ++ DE N+ L + F P I+ ++ T +++ L I
Sbjct: 1262 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 1321
Query: 293 DQGL-------------VLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
Q L + I L K+ L LL ++ + D+ +T+++ CD
Sbjct: 1322 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCD 1381
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV-AEIVEEMTKAGHSLG-- 394
+ A+ FE + + Y L+G L+ ++ + AE+ + M G L
Sbjct: 1382 ASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHE 1441
Query: 395 --------------VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFS 440
V LG ++ G P A K+F + DQ+ ++A++GVY
Sbjct: 1442 LSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGM--DQRNVVLWSAMLGVYVF 1499
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
++A +++ M +G+ P TF LL
Sbjct: 1500 HKQEEQAFGLWRVMGLEGVEPDAVTFLSLL 1529
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 13/233 (5%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWD--------SYTVNQVLKTHP-PMEKAWLFFNWVSRSRG 61
+ K + DSAQ+LL+ + I D S ++ + K P ++WL + + ++R
Sbjct: 450 LCKAAAIDSAQELLR-MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL--DVMVKNRC 506
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ D TY +++D +++RI+ +F+ M+ G+ D VTY+ V+H ++D A
Sbjct: 507 Y-PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAF 565
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ E MK +C P +V+Y+A + L V +A DV++EM+ G PN TY L++ L
Sbjct: 566 KMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGL 625
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ K E+A E+ M++ PD LI C A +LR MK+
Sbjct: 626 CKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKD 678
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 174/439 (39%), Gaps = 34/439 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A ++RS G + + TY T++D + RI ++ E M + G + VTYT
Sbjct: 999 LDEATALLQRMTRS-GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ G + A+ + E M K P + +Y + + + D V+ A + MIQ+
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN +Y ++ L +A K E + + +M PD N +I+ CK
Sbjct: 1118 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA 1177
Query: 226 ILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQ--FSPEFISDNDAVE 280
+ ++E+ + Y L + D+ + LL ++ + SP+ I+ N
Sbjct: 1178 YELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN---- 1233
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
T I+G L K K + L ++ + D S +I C R
Sbjct: 1234 ---TVIDG-----------LCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D A E +K + Y LI K K EI++ + G V ++
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339
Query: 401 LIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
I L R A ++ L+P+ T TY L+ + A + A+ +++ M
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPD----TVTYNTLLKGFCDASLTEDAVDLFEVM 1395
Query: 455 CRKGIHPSLGTFNVLLAGL 473
+ G P T+ L+ L
Sbjct: 1396 RQCGCEPDNATYTTLVGHL 1414
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 110/216 (50%), Gaps = 10/216 (4%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKW----DSYTVNQV---LKTHPPMEKAW-LFFNWVS 57
S V+ + K +D A+ LL+ + K D T N V L +++A+ LF +S
Sbjct: 1198 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 1257
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
G D TY+ ++ + + + V ELM + G + A+TY +++ G++
Sbjct: 1258 D--GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 1315
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I + + K YP +V+++ ++ L R+++A ++ + M++ GL P+ TY L
Sbjct: 1316 DKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTL 1375
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
++ A E+A+++F M++ G +PD A L+
Sbjct: 1376 LKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 194/500 (38%), Gaps = 73/500 (14%)
Query: 17 WDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF 76
W+ A+ L+ K + V +VL+ + A FF+W + G+NHD +T +L
Sbjct: 795 WEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQAL 854
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
KR V+ + + + T+T ++H L AGD+
Sbjct: 855 LRLKRPKDALQVYR--NKLCCSPNMFTFTILIHGLCRAGDIG------------------ 894
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
TAY ++ KEM + G+P N + V+++ L A K + ALE+F +
Sbjct: 895 ---TAY--------------ELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKE 937
Query: 197 MQEAG-VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA- 254
M+E+G PD + +++ K+G+ ++ M + + L A
Sbjct: 938 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG 997
Query: 255 --DENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
DE +LL ++ SP ++ N T I+G + + ID
Sbjct: 998 KLDEATALLQRMTRSGCSPNIVTYN-------TIIDGHCKLGR--------------IDE 1036
Query: 312 ---LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
LL ++D Q + + +++ C + + A+ E V+ Y +L+
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 1096
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
+ K + + +++ M + G V +I L A + + + + C
Sbjct: 1097 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN-CV 1155
Query: 429 ---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
T+ +I D A +++ + G P+L T+N L+ GL K R AE
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215
Query: 486 RKE---KKSIQADALSKDAV 502
+E K+ D ++ + V
Sbjct: 1216 LREMTRKQGCSPDIITYNTV 1235
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 130/356 (36%), Gaps = 29/356 (8%)
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
I + +L + +A D+++ I+ + TY+ L+ +RAGK A E+F
Sbjct: 126 IFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFD 185
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--ALRYPVFKEALQTFKV 253
+M G++ ++ C AG+ +L R M + ++ Y L
Sbjct: 186 EMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDR 245
Query: 254 ADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
D+ LL + V F+P S N T + G K + L
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYN-------TVLHG-----------FCKANRVENALWL 287
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
L ++ + D +T+I C + D A + ++ Y L+ +
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKC 427
+ E+V +MT+ G+ ++H A ++ ++ P D
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPD--- 404
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y+ +I + AG +A + + M R+G P + + L+ L K + A+
Sbjct: 405 AINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQ 460
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSA 444
T+ G+ ++ L++ L A + A +F E Q T TY+ LI + AG
Sbjct: 118 TRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKI 177
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI-YRKEKKSIQADALS 498
A +++ M RKG+ G +L GL G+ SDA + +R+ K+ D+++
Sbjct: 178 LPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVT 232
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 117/231 (50%), Gaps = 1/231 (0%)
Query: 5 ISNVYKILKYSTW-DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV IL+ W +A++ L N + D+Y NQVLK A FF W+ R GF
Sbjct: 287 VENVSGILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFK 346
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTTM+ G AK+ ++ + + M + G + VTY ++H A ++ A+N+
Sbjct: 347 HDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNV 406
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+++M+ C P V+Y + I + A D+Y+ M GL P+ +TY+V++ L +
Sbjct: 407 FKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGK 466
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AG A +F +M G P+ NI+I KA T + + R M+
Sbjct: 467 AGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 517
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY T++DI +A + +++ MQ G++ D TY+ +++ L AG + A
Sbjct: 414 GCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAA 473
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM + C P +V++ + + + A +Y++M G P+ TY+++ME
Sbjct: 474 HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 533
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G EEA +F++MQ PD+ +L++ KAG + M L
Sbjct: 534 LGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPN 593
Query: 241 YPVFKEALQTF 251
P L TF
Sbjct: 594 VPTCNSLLSTF 604
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G + T+ M+ + +A+ + ++ MQ G D VTY+ VM L + G ++
Sbjct: 482 GQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLE 541
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EM+ K P Y + + V++A Y+EM+ GL PN T L+
Sbjct: 542 EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLL 601
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+R + EA + M G+ P +L+ C A
Sbjct: 602 STFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 642
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ GF D+ TY+ ++++ G + + VF MQ K D Y ++ AG+V
Sbjct: 516 QNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNV 575
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++EM P + + + + R+ EA ++ + M+ GL P+ TYT+L
Sbjct: 576 EKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLL 635
Query: 178 M 178
+
Sbjct: 636 L 636
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 11/213 (5%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V L + K AI+ LL ++ + ++ + +I + A+ F+ +
Sbjct: 355 MVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAG 414
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K ++ + M AG S + +++I+ LG A A
Sbjct: 415 CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAH 474
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++F + Q CT T+ +I ++ A + + ALK+Y+ M G P T+++++
Sbjct: 475 RLFCEM-VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 533
Query: 473 LEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
L G + +AE + A+ K+ VP E
Sbjct: 534 LGHCGFLEEAE-------GVFAEMQRKNWVPDE 559
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 346 LAFEYSVKMDLNLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
L F Y +K + Y ++G L + F + +++EM K G LIH
Sbjct: 333 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIH 392
Query: 404 RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
G A A +F + E + TY LI ++ AG D A+ +Y+ M G+ P
Sbjct: 393 SYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSP 452
Query: 462 SLGTFNVLLAGLEKLGRVSDAE 483
T++V++ L K G + A
Sbjct: 453 DTFTYSVIINCLGKAGHLPAAH 474
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 217/485 (44%), Gaps = 48/485 (9%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTYT+++ + + VF+ M ++G + ++VTY+++++ L N G VD A+++
Sbjct: 274 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 333
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEM K PT+ +YT + L + +EA ++ M +RG PN TYT L+ L R
Sbjct: 334 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 393
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
GK E A+ ++ KM + G+ P+ N LI + C G T + I +M+ + +
Sbjct: 394 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 453
Query: 245 KEALQTFKVAD--ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQGLVLI 299
E ++ + E +L++ + P V T I G L+ ++ L+
Sbjct: 454 NEIIKGLCLGGDIEKAMVLFEKMLKMGPL-----PTVVTYNTLINGYLTKGNVNNAARLL 508
Query: 300 LLKKKNLVAID-----SLLSGIMDKSIQLDSAVISTIIEVNC-------------DHRRR 341
L K+N D L+SG K +L+SA V C D +
Sbjct: 509 DLMKENGCEPDEWTYNELVSG-FSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSK 567
Query: 342 DG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
DG AL E +M N +Y A+I L K N F + +I ++M + G V
Sbjct: 568 DGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVIT 627
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTM 454
LI L R A KIF + E +KC TY++LI G AD+A + K M
Sbjct: 628 YTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM 686
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK-----------EKKSIQADALSKDAVP 503
RKG+ P TF L+ G LGR+ A + + S+ L K+ +
Sbjct: 687 ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLL 746
Query: 504 MEEKI 508
+EEK+
Sbjct: 747 LEEKV 751
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 174/426 (40%), Gaps = 58/426 (13%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D +TY ++ F + ++ S + F+ M E G+N + V+YT+++ S G V
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+++ E M+ C P + SY A + L +R EA + +M ++GL PN TYT L
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L R G+ + A +IF M++ P+ + LI C+ G+ ++L+ M+ L
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
A F + F V D + +D G
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRM------------------------VDVGC- 726
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K N LL G+ + + L+ V + A+ +F K D+N
Sbjct: 727 -----KPNYRTYSVLLKGLQKECLLLEEKVAV-----------QHEAVYSFSPHEK-DVN 769
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
E I N +++EI E T +S V G R A + V K
Sbjct: 770 FE-----------IVSNLLARMSEIGCEPTLDTYSTLVS-GLCRKGRFYEAEQLVKDMKE 817
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
P+ + Y +L+ + D ALKI+ ++ KG L + L+ L K G
Sbjct: 818 RGFCPDRE----IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG 873
Query: 478 RVSDAE 483
+V +A+
Sbjct: 874 QVEEAQ 879
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 186/475 (39%), Gaps = 47/475 (9%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+K + D +T N+++ +E A +F + G N + +YTT++D +
Sbjct: 509 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC-GLNPNPVSYTTLIDGHSK 567
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
++ + E M+E G N + +Y +V++ LS A I ++M + P +++
Sbjct: 568 DGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVIT 627
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YT + L N R + A ++ +M +R PN YTY+ L+ L + GK +EA + +M+
Sbjct: 628 YTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEME 687
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK----VA 254
G+ PD+ LI+ G L+LR M + Y + L+ + +
Sbjct: 688 RKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLL 747
Query: 255 DENDSLLWQVHPQFSPE------FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+E ++ + FSP I N E L LV L +K
Sbjct: 748 EEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYE 807
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ L+ + ++ D + +++ +C + D AL F L + Y ALI
Sbjct: 808 AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALIC 867
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
L K + + + M L E
Sbjct: 868 ALCKAGQVEEAQALFDNM---------------------------------LEKEWNADE 894
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+T L+ G D +K+ M K P++ T+ +L L ++G+ ++E
Sbjct: 895 IVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESE 949
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 119/576 (20%), Positives = 206/576 (35%), Gaps = 121/576 (21%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
+S V IL W + +L K L + ++ V +++ H E FF W+S+ + H
Sbjct: 90 VSRVCAILSRVQWKGSSEL-KQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKH 148
Query: 65 DRFTYTTMLD------IFGEA------------------------KRISSMKYVFEL--- 91
+ + +ML+ +F A IS M + F L
Sbjct: 149 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSC 208
Query: 92 ----------------------MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
M GI +T+ ++++ LS G V A I ++
Sbjct: 209 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 268
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ P + +YT+ + N + A V+ M++ G PN TY+ L+ L G+ +E
Sbjct: 269 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 328
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
AL++ +M E G++P + I C I ++ MK+ + +Q
Sbjct: 329 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGC-------RPNVQ 381
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
T+ S L G L + GL +LK+
Sbjct: 382 TYTALISGLSRL--------------------------GKLEVAIGLYHKMLKE------ 409
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
G++ ++ ++ +I C R AL F + Y +I
Sbjct: 410 -----GLVPNTVTYNA-----LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 459
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
L K + E+M K G V LI+ + AA++ L+ E+ C
Sbjct: 460 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN-GCEP 518
Query: 430 ---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA--EI 484
TY L+ + G + A ++ M G++P+ ++ L+ G K G+V A +
Sbjct: 519 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLL 578
Query: 485 YRKEKKSIQADALSKDAV----------PMEEKICD 510
R E+ + S +AV EKICD
Sbjct: 579 ERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RGF DR Y ++L + + +F ++ KG + Y +++ L AG V
Sbjct: 816 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 875
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A +++ M KE + +T + L + + M + PN TY +L
Sbjct: 876 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935
Query: 178 MEYLVRAGKYEEALEIFSKMQ 198
L R GK E+ + K++
Sbjct: 936 GRELSRIGKSIESEPLADKLK 956
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 187/424 (44%), Gaps = 48/424 (11%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +T +++ KR+ V E G D VTY + L A VD A +
Sbjct: 6 DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M K+C PT V+YTA + L R+ EA V ++M+++G P TYTV+++ L +A
Sbjct: 66 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ EEA IF M G +PD LI+ CK+G+
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKP---------------------- 163
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+EA +K A+ H P+ ++ T+ I+G + +L+ +
Sbjct: 164 EEAYALYKEANARKH-----HATAVPDVVT-------YTSLIDGLCKAGR-----ILEAR 206
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ +++ G + D+ ++II+ C R + F + Y
Sbjct: 207 QVFDDEAVERGFIP-----DAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYA 261
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
ALI +K PK + +M ++G + +++ L A R A F L E+
Sbjct: 262 ALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF-LAMEE 320
Query: 425 QKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ C A TY+AL+ + S G+ A+++++ M +G P+L ++N+++ GL + G+++
Sbjct: 321 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 380
Query: 482 AEIY 485
A Y
Sbjct: 381 AYFY 384
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 186/447 (41%), Gaps = 72/447 (16%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +A R+ + +F M G DA YT+++ L +G + A +++E
Sbjct: 114 TYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEA 173
Query: 128 KLKECY----PTIVSYTAYMKILFLNDRVKEATDVYK-EMIQRGLPPNCYTYTVLMEYLV 182
++ + P +V+YT+ + L R+ EA V+ E ++RG P+ TYT +++ L
Sbjct: 174 NARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLC 233
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ G+ EE E F +M+ G +PD LI+ +MK + +
Sbjct: 234 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG---------------FMKAKMIPKAHR 278
Query: 243 VFKEALQ--------TFKVADENDSLLWQVHPQFSPEF-ISDNDAVEFVTTDIEGPLSID 293
V+++ LQ T+ + + +V ++ + + V V T
Sbjct: 279 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTY-------- 330
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L+ + N+ A L ++D+ + + + II C + A FE ++
Sbjct: 331 SALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQ 390
Query: 354 MDLNLERTAYLALI-GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
L + + A + G+ +L+T E+ E M G S ++
Sbjct: 391 RRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLH---------------- 434
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+Y+ L+ AG + AL+I++ M +G+ P + FN L+
Sbjct: 435 -----------------SYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRW 477
Query: 473 LEKLGRVSDA-EIYRKEKKSIQADALS 498
L GRV +A E++R+ ++ DA S
Sbjct: 478 LCIAGRVDEALEVFRELERRSAPDAWS 504
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 36/240 (15%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+RG+ D TY ++D F +AK I V+ M + G + VTY ++ L AG V
Sbjct: 249 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 308
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + M+ + C T+V+Y+A M V A ++++ M+ RG PN +Y ++
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368
Query: 178 MEYLVRAGKYEEA------------------------------------LEIFSKMQEAG 201
+ L RAGK +A +E+F M G
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG 428
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
P+ + +IL++ C+AG + I R M +A VF ++ +A D L
Sbjct: 429 TSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEAL 488
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 185/444 (41%), Gaps = 39/444 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY +D +A+R+ + + M EK VTYT+++ L AG +D A
Sbjct: 37 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 96
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + E+M K PT+ +YT + L RV+EA ++ +M+ G P+ + YT L++
Sbjct: 97 MAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKG 156
Query: 181 LVRAGKYEEALEIF----SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L ++GK EEA ++ ++ A PD LI+ CKAG IL R + ++
Sbjct: 157 LCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGR----ILEARQVFDDE 212
Query: 237 L--------ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIE 287
A+ Y + L +E ++ + + P DAV +
Sbjct: 213 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP------DAVTYAAL--- 263
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
ID + ++ K + V L SG + + + + I++ C R A
Sbjct: 264 ----IDGFMKAKMIPKAHRVYRQMLQSGTV-----VSTVTYNIILDGLCKAGRVAEAYAT 314
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F + Y AL+ E+ M G + ++I L
Sbjct: 315 FLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCR 374
Query: 408 ARRPVPAAKIFSLLPEDQKCTATYT---ALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
A + A F L + + C YT L G+ + ++++++M +G P+L
Sbjct: 375 AGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLH 434
Query: 465 TFNVLLAGLEKLGRVSDA-EIYRK 487
++++L+ G+ + G + A EI+R+
Sbjct: 435 SYSILMDGICRAGGLEVALEIFRE 458
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A F+ + RGF D TYT+++D + R+ F M+ +G DAVTY ++
Sbjct: 204 EARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 263
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ A + A ++ +M + V+Y + L RV EA + M +RG
Sbjct: 264 IDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGC 323
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
TY+ LM+ G A+E+F +M + G +P+ + NI+I C+AG+
Sbjct: 324 VATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYF 383
Query: 228 ILRYMKENRLA 238
+ + RL
Sbjct: 384 YFEKLLQRRLC 394
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
M + + A+ +I L + + ++E +AG + I L A R
Sbjct: 1 MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60
Query: 414 AAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A ++ + E +KC T TYTAL+ AG D+A+ + + M KG P+L T+ V++
Sbjct: 61 AFQLLKKMDE-KKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVI 119
Query: 471 AGLEKLGRVSDA 482
GL K GRV +A
Sbjct: 120 DGLSKAGRVEEA 131
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 130/329 (39%), Gaps = 37/329 (11%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ +TV++ L R + +EA + + AG +PD N+ I+ CKA +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 229 LRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
L+ M E + + Y + L DE ++L Q+ + ++ ++ T
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEK------GNSPTLKTYTVV 118
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I+G L K + + ++ + D+ V + +I+ C + + A
Sbjct: 119 IDG-----------LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEA- 166
Query: 346 LAFEYSVKMDLNLER---------TAYLALIGILIKLNTFPKVAEIV-EEMTKAGHSLGV 395
Y++ + N + Y +LI L K + ++ +E + G
Sbjct: 167 ----YALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDA 222
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKT 453
+I L R + F + + TY ALI + A KA ++Y+
Sbjct: 223 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 282
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M + G S T+N++L GL K GRV++A
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEA 311
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 32 DSYTVNQVL-----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
D YT N L + + LF + VS+ G + + +Y+ ++D A +
Sbjct: 396 DVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ--GTSPNLHSYSILMDGICRAGGLEVAL 453
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+F M +G+ D V + +++ WL AG VD A+ ++ E++ + P SY + + L
Sbjct: 454 EIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGL 512
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+R++EA + M +G P Y TV
Sbjct: 513 SRCERMEEARLLSFHMKLQGCAPRHYDLTV 542
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 219/489 (44%), Gaps = 48/489 (9%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTYT+++ + + VF+ M ++G + ++VTY+++++ L N G VD A+++
Sbjct: 232 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEM K PT+ +YT + L + +EA ++ M +RG PN TYT L+ L R
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
GK E A+ ++ KM + G+ P+ N LI + C G T + I +M+ + +
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 411
Query: 245 KEALQTFKVAD--ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQGLVLI 299
E ++ + E +L++ + P V T I G L+ ++ L+
Sbjct: 412 NEIIKGLCLGGDIEKAMVLFEKMLKMGPL-----PTVVTYNTLINGYLTKGNVNNAARLL 466
Query: 300 LLKKKNLVAID-----SLLSGIMDKSIQLDSAVISTIIEVNC-------------DHRRR 341
L K+N D L+SG K +L+SA V C D +
Sbjct: 467 DLMKENGCEPDEWTYNELVSGF-SKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSK 525
Query: 342 DG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
DG AL + +M N +Y A+I L K N F + +I ++M + G V
Sbjct: 526 DGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVIT 585
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTM 454
LI L R A KIF + E +KC TY++LI G AD+A + K M
Sbjct: 586 YTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEM 644
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK-----------EKKSIQADALSKDAVP 503
RKG+ P TF L+ G LGR+ A + + S+ L K+ +
Sbjct: 645 ERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLL 704
Query: 504 MEEKICDLL 512
+EEKI L+
Sbjct: 705 LEEKIFPLV 713
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 102/201 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D +TY ++ F + ++ S + F+ M E G+N + V+YT+++ S G V
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+++ + M+ C P + SY A + L +R EA + +M+++GL PN TYT L
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L R G+ + A +IF M++ P+ + LI C+ G+ ++L+ M+ L
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 649
Query: 238 ALRYPVFKEALQTFKVADEND 258
A F + F V D
Sbjct: 650 APDEVTFTSLIDGFVVLGRID 670
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 4/214 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+K + D +T N+++ +E A +F + G N + +YT ++D +
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC-GLNPNPVSYTALIDGHSK 525
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
++ + + M+E G N + +Y +V++ LS A I ++M + P +++
Sbjct: 526 DGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVIT 585
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YT + L N R + A ++ +M +R PN YTY+ L+ L + GK +EA + +M+
Sbjct: 586 YTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEME 645
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
G+ PD+ LI+ G L+LR M
Sbjct: 646 RKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 119/576 (20%), Positives = 206/576 (35%), Gaps = 121/576 (21%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
+S V IL W + +L K L + ++ V +++ H E FF W+S+ + H
Sbjct: 48 VSRVCAILSRVQWKGSSEL-KQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKH 106
Query: 65 DRFTYTTMLD------IFGEA------------------------KRISSMKYVFEL--- 91
+ + +ML+ +F A IS M + F L
Sbjct: 107 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSC 166
Query: 92 ----------------------MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
M GI +T+ ++++ LS G V A I ++
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ P + +YT+ + N + A V+ M++ G PN TY+ L+ L G+ +E
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
AL++ +M E G++P + I C I ++ MK+ + +Q
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGC-------RPNVQ 339
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
T+ S L G L + GL +LK+
Sbjct: 340 TYTALISGLSRL--------------------------GKLEVAIGLYHKMLKE------ 367
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
G++ ++ ++ +I C R AL F + Y +I
Sbjct: 368 -----GLVPNTVTYNA-----LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
L K + E+M K G V LI+ + AA++ L+ E+ C
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN-GCEP 476
Query: 430 ---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA--EI 484
TY L+ + G + A ++ M G++P+ ++ L+ G K G+V A +
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536
Query: 485 YRKEKKSIQADALSKDAV----------PMEEKICD 510
R E+ + S +AV EKICD
Sbjct: 537 KRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 5 ISNVYKILKYSTW-DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV IL+ W +A++ L N + D+Y NQVLK A FF W+ R GF
Sbjct: 297 VENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFK 356
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTTM+ G AK+ + + + M G + VTY ++H A + A+N+
Sbjct: 357 HDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNV 416
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ +M+ C P V+Y + I + A D+Y+ M + GL P+ +TY+V++ L +
Sbjct: 417 FNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGK 476
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AG A +F +M G P+ NI+I KA T + + R M+
Sbjct: 477 AGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQN 527
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FN + + G DR TY T++DI +A + +++ MQE G++ D TY+
Sbjct: 410 LKEAMNVFNQMQEA-GCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L AG + A ++ EM + C P +V++ + + + A +Y++M
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ TY+++ME L G EEA +F++MQ PD+ +L++ KAG
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 226 ILILRYMKENRLALRYPVFKEALQTF 251
+ M + L P L TF
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTF 614
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G + T+ M+ + +A+ + ++ MQ G D VTY+ VM L + G ++
Sbjct: 492 GQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLE 551
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EM+ K P Y + + V +A Y+ M+Q GL PN T L+
Sbjct: 552 EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+R + EA + M G+ P +L+ C A
Sbjct: 612 STFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 346 LAFEYSVKMDLNLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
L F Y +K + Y ++G L + F ++ ++++EM + G LIH
Sbjct: 343 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIH 402
Query: 404 RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
G A A +F+ + E + TY LI ++ AG D A+ +Y+ M G+ P
Sbjct: 403 SYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSP 462
Query: 462 SLGTFNVLLAGLEKLGRVSDAE 483
T++V++ L K G + A
Sbjct: 463 DTFTYSVIINCLGKAGHLPAAH 484
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V L + K I+ LL ++ + ++ + +I A+ F +
Sbjct: 365 MVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAG 424
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K ++ + M +AG S + +++I+ LG A A
Sbjct: 425 CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAH 484
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++F + Q CT T+ +I ++ A + + ALK+Y+ M G P T+++++
Sbjct: 485 RLFCEM-VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 543
Query: 473 LEKLGRVSDAE 483
L G + +AE
Sbjct: 544 LGHCGFLEEAE 554
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 118/322 (36%), Gaps = 53/322 (16%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q G + +TYT ++ L RA ++ E ++ +M G +P+ N LI
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHS-------- 403
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
Y + N L KEA+ F E + D V + T
Sbjct: 404 -------YGRANYL-------KEAMNVFNQMQEAGC---------------EPDRVTYCT 434
Query: 284 TDIEGPLSIDQGLVLILLKKKNL-VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
L+ I K L +A+D + + + + D+ S II
Sbjct: 435 ------------LIDIHAKAGFLDIAMD-MYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A F V + +I + K + ++ +M AG ++++
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LG A +F+ + Y L+ ++ AG+ DKA + Y+ M + G+
Sbjct: 542 EVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLR 601
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P++ T N LL+ ++ R+S+A
Sbjct: 602 PNVPTCNSLLSTFLRVHRMSEA 623
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 208/500 (41%), Gaps = 66/500 (13%)
Query: 35 TVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T+N +L ++ M A LFF + R D FTYT+++ + + VF +
Sbjct: 191 TLNTMLNSYCKLGNMAVARLFFVRILRCEP-GPDLFTYTSLVLGYCRNDDVERACGVFCV 249
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M + +AV+YT+++H L AG + A+ W M+ C+PT+ +YT + L + R
Sbjct: 250 MPRR----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGR 305
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
EA ++ EM +RG PN YTYTVL++YL + G+ +EAL++ ++M E GV P N
Sbjct: 306 ELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNA 365
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQ-VHPQ 267
LI CK G + +L M+ ++ + E + F K D +LL + V +
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK 425
Query: 268 FSPEFISDN-------------DAVEFVTTDIEGPLSIDQ----GLVLILLKKKNLVAID 310
SP+ ++ N A I S DQ ++ L + +
Sbjct: 426 LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAH 485
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNC-------------------------------DHR 339
+L + +K ++ + + +I+ C D
Sbjct: 486 QILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL 545
Query: 340 RRDG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R++G A+L E K D+ Y L+ ++K F + EI+ + +G+ V
Sbjct: 546 RKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNV 605
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKT 453
I S R A ++ + + + Y LI Y G D A + +
Sbjct: 606 VTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRR 665
Query: 454 MCRKGIHPSLGTFNVLLAGL 473
M G PS T+++L+ L
Sbjct: 666 MFGTGCEPSYLTYSILMKHL 685
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 86/205 (41%), Gaps = 29/205 (14%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G+ + TYT + + R+ + + ++ +G+ +D+ Y +++ G +D
Sbjct: 598 SSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLD 657
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD--------------------- 157
A + M C P+ ++Y+ MK L + KE ++
Sbjct: 658 SAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSK 717
Query: 158 --------VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
++++M + G PN TY+ L+ L + G+ A ++ M+E G+ P +
Sbjct: 718 IDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIH 777
Query: 210 NILIEKCCKAGETRTIILILRYMKE 234
N L+ CCK G + +L M E
Sbjct: 778 NSLLSSCCKLGMFGEAVTLLDSMME 802
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 69/167 (41%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+FE M E G + TY+ +++ L G ++ A +++ M+ P+ + + + +
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
EA + M++ + +Y +L+ L E+A +F + G D+
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
A +LI+ K G +L M++N L + +Q A
Sbjct: 846 AWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/544 (22%), Positives = 231/544 (42%), Gaps = 70/544 (12%)
Query: 3 DTISNVYKILKYSTWDSAQDLLK-----NLPIKWDSYTV-NQVLKTHPPMEKAWLFFNWV 56
+T+ N + ++ W A++ K + ++Y V +V+ EK W+
Sbjct: 117 NTLLNAF--VESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWM 174
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+ G + DR TY T++ ++ + VF+ M+E+G+ D V Y ++ GD
Sbjct: 175 WGA-GMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGD 233
Query: 117 VDGAVNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
A +WE + +E +P++VSY + L R E ++++ M + + +TY+
Sbjct: 234 FVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYS 293
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ L AG A +++ +M GV+PD CN ++ CKAG + M
Sbjct: 294 ALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEM--G 351
Query: 236 RLALR----YPVFKEAL-QTFKVAD---------ENDSLLWQ--VHPQFSPEFISDNDAV 279
+ +LR Y +F + L + KV D E DS + VH +++ V
Sbjct: 352 KCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQV 411
Query: 280 EFVTTDIEGPLSIDQ----GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
EG + +D+ L+ L K+ L D ++ + + + +S V + +I+
Sbjct: 412 LEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGF 471
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK------- 388
H + D A+ F +L +Y LI L++ F + + V EM +
Sbjct: 472 VKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDI 531
Query: 389 ----------------------------AGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
GH + + ++IHRL S+ + A +++S
Sbjct: 532 ITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYST 591
Query: 421 LPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
L + +KC T+ ++ ++ G+ + A KI+ + + P + ++N+ L GL GR
Sbjct: 592 LRQ-KKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGR 650
Query: 479 VSDA 482
V+DA
Sbjct: 651 VTDA 654
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 71 TMLDIFGEAKRISSMKYVFELMQEK-GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T+L + + + + +VF+ M G + ++ ++++ + A N ++ +
Sbjct: 82 TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
P + +Y MK++ ++ + M G+ P+ TY L+ + ++G
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
ALE+F +M+E GV+PD N++I+ K G+
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGD 233
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C PTI S+ + + + A + +K + PN TY VLM+ + + G++E+
Sbjct: 109 CSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGR 168
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ + M AG+ PD+ LI K+G+ + + M+E
Sbjct: 169 GLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRE 211
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
L Q+K +N+ VT+ ++M G+ + A IW + E P I+SY +K L
Sbjct: 592 LRQKKCVNL--VTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCG 649
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
RV +A + + RG P T+ +L+ ++
Sbjct: 650 RVTDAVGFLDDALVRGFLPTAITWNILVRAVI 681
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 128/520 (24%), Positives = 210/520 (40%), Gaps = 72/520 (13%)
Query: 13 KYSTWDSAQDLLKNLPIK------WDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
+ W++A +++ + K W T+ L ++A + R G D
Sbjct: 56 RAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM-RDNGCVPDV 114
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY ++ G+A R+S +F M+E+G D TY S+++ L G A+ + EE
Sbjct: 115 RTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEE 174
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M+ C P +++Y++ + L + +A +++EM +RG P+ T+T LM+ L +AG+
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR 234
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPV 243
++ALE+ +M+E GV+P N LI K G+ +L MK N + Y
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC 294
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
L DE +L ++ + P D + + T L+ L K
Sbjct: 295 LITGLIKASQLDEACQVLKKMEKEGCPP-----DTITYNT------------LINGLGKA 337
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
L L + K D ST+I R + A + FE + + + Y
Sbjct: 338 GLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTY 397
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF----- 418
++I +L K + EM G S V ++ LG R A KIF
Sbjct: 398 CSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKE 457
Query: 419 -SLLPEDQKCTATYTALI----------------------GVYF-------------SAG 442
LLP+ ATY AL+ G F S G
Sbjct: 458 SGLLPD----VATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWG 513
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ D+A ++ + KG+ P ++N L+ L K GRVS+A
Sbjct: 514 NVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 198/446 (44%), Gaps = 45/446 (10%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ F + R RG D T+T ++D G+A R+ + + M+E+G+ VTY ++
Sbjct: 202 KAFKLFQEMKR-RGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL 260
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ GD+ A N+ +EMK C P +V+Y+ + L ++ EA V K+M + G
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
PP+ TY L+ L +AG +A +F +M+ G PD + LI KA + +
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380
Query: 228 ILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVT 283
+ M+ + Y L D+ D L ++ + SP+ I+ N F+
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYN---AFLN 437
Query: 284 TDIEGPLSIDQGLVLILLKKKNLV----AIDSLLSGIMDKSIQLDSA--VISTIIEVNCD 337
+ G + + +K+ L+ D+LL G + K+ ++D A ++ +IE C
Sbjct: 438 SLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLG-LSKTKEVDDACGLLKELIEQGC- 495
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
AF+ S+K D LE L ++ V E E+ + +S G++
Sbjct: 496 ---------AFD-SLKFDECLE------------ILTSWGNVDE-AHELLQFANSKGLWP 532
Query: 398 GA----LLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
GA LI L A R A L E + +Y++LI G D A ++
Sbjct: 533 GASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELL 592
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ M ++G+ S +++ L+ L+ G
Sbjct: 593 EEMSKRGLKLSPRSYSNLVRKLQDWG 618
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 189/452 (41%), Gaps = 26/452 (5%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+A L F + ++ + D +Y+ +++ G A + + V MQ KG + TY +
Sbjct: 26 EEAQLLFEELKAAK-WTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNT 84
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L AG D A+ + EM+ C P + +Y + L R+ EA ++ EM +RG
Sbjct: 85 LVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERG 144
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
P+ +TY L+ L + G+ ++A+E+ +M+ G PD + LI K GET
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204
Query: 227 LILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFV 282
+ + MK ++ + +AL D+ LL ++ + P ++ N
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYN------ 258
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
L+ K +LV +LL + + D S +I + D
Sbjct: 259 ------------ALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A + K + Y LI L K + + M G + V + LI
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366
Query: 403 HRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LG A R A +F + Q TY ++I V AG D A +++ M KG+
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426
Query: 461 PSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
P + T+N L L + GR +A +I+ K+S
Sbjct: 427 PDVITYNAFLNSLGRGGRFKEARKIFEDMKES 458
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 172/399 (43%), Gaps = 24/399 (6%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ VTY S+++ L+ AG + A ++EE+K + P +VSY+ + L + + A +V
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
EM +G PN +TY L++ L +AG+++EAL + ++M++ G PD N LI KA
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 220 GETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
G + M+E Y L + + LL ++ P
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP----- 182
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
D + + + L+ L K V L + + + DS + +++
Sbjct: 183 DVMTYSS------------LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALG 230
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
R D AL + + + Y ALI K+ + +++EM + G V
Sbjct: 231 KAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVV 290
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKT 453
+ LI L A + A ++ + E + C T TY LI AG + A +++
Sbjct: 291 TYSCLITGLIKASQLDEACQVLKKM-EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
M KG +P + T++ L+ L K RV A + +E +S+
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESV 388
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 4/264 (1%)
Query: 2 RDTISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
R + V IL+ W +A+ L NL D+Y NQ+LK A FF+W+ R
Sbjct: 312 RRIVEVVSDILRQLRWGPTAEKALYNLNFSMDAYQANQILKQLQDPSVALGFFDWLRRQP 371
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF HD TYTTM+ I G A+R S+ + E M + G + VTY ++H A + A
Sbjct: 372 GFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEA 431
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+N++ EM+ C P V+Y + I + A +YK M + GL P+ +TY+V++
Sbjct: 432 LNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINC 491
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
L +AG A +F +M E G P+ NI+I KA + + M+
Sbjct: 492 LGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPD 551
Query: 239 -LRYPVFKEALQTFKVADENDSLL 261
+ Y + EAL +E +S+
Sbjct: 552 KVTYSIVMEALGHCGYLEEAESVF 575
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY T++DI +A I +++ MQE G++ D TY+ +++ L AG++ A
Sbjct: 442 GCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAA 501
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM C P +V+Y + + + A +Y +M G P+ TY+++ME
Sbjct: 502 HWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEA 561
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L G EEA +F +MQ+ PD+ +L++ KAG
Sbjct: 562 LGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGN 602
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 82/153 (53%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY+ +++ G+A +++ ++F M E G + VTY ++ + A + + A
Sbjct: 477 GLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMA 536
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +M+ P V+Y+ M+ L ++EA V+ EM Q+ P+ Y +L++
Sbjct: 537 LKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDL 596
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+AG E+A E + M AG+ P+ CN L+
Sbjct: 597 WGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLL 629
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 50 WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMH 109
WLF V G + TY M+ + +A+ ++ MQ G D VTY+ VM
Sbjct: 503 WLFCEMVEH--GCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVME 560
Query: 110 WLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
L + G ++ A +++ EM+ K P Y + + V++A++ Y+ M+ GL P
Sbjct: 561 ALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLP 620
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
N T L+ +R + +A + M G++P +L+ C +A
Sbjct: 621 NVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLLSCCTEA 670
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++GIL + F +++++E+M K G V LIH G A A +F+ +
Sbjct: 380 YTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQ 439
Query: 423 E--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
E + TY LI ++ AG D A+ +YK M G+ P T++V++ L K G ++
Sbjct: 440 EVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLA 499
Query: 481 DAE 483
A
Sbjct: 500 AAH 502
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV-NCDHRRRDGALLAFEYSVKM 354
+V IL + + +I LL ++ Q + + +I C + ++ AL F ++
Sbjct: 383 MVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKE-ALNVFNEMQEV 441
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+R Y LI I K + + M +AG S + +++I+ LG A A
Sbjct: 442 GCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAA 501
Query: 415 AKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
+F + E C TY +I + A + + ALK+Y M G P T+++++
Sbjct: 502 HWLFCEMVE-HGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVME 560
Query: 472 GLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
L G Y +E +S+ + K+ VP E
Sbjct: 561 ALGHCG-------YLEEAESVFVEMQQKNWVPDE 587
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 123/329 (37%), Gaps = 67/329 (20%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q G + +TYT ++ L RA +++ ++ +M + G QP+ N LI C
Sbjct: 370 QPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIH--C------ 421
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
Y N L KEAL F E + D V + T
Sbjct: 422 -------YGCANYL-------KEALNVFNEMQE---------------VGCEPDRVTYCT 452
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
L+ I K + S+ + + + D+ S II NC + G
Sbjct: 453 ------------LIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVII--NC--LGKAG 496
Query: 344 ALLA----FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
L A F V+ Y +I + K + ++ +M AG +
Sbjct: 497 NLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYS 556
Query: 400 LLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
+++ LG A +F + +P++ Y L+ ++ AG+ +KA + Y+
Sbjct: 557 IVMEALGHCGYLEEAESVFVEMQQKNWVPDE----PVYGLLVDLWGKAGNVEKASEWYQA 612
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M G+ P++ T N LL+ +L R+ DA
Sbjct: 613 MLNAGLLPNVPTCNSLLSAFLRLHRLPDA 641
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 4/261 (1%)
Query: 5 ISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ NV +IL+ W SA++ L NL D+Y NQVLK A FF+W+ + GF
Sbjct: 276 VENVSQILRQLRWGPSAEEALVNLNCHMDAYQANQVLKQLQDHTVALGFFHWLKQLPGFK 335
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD +TYTTM+ I G AK+ ++ + + M G VTY ++H A ++ AV +
Sbjct: 336 HDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEV 395
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ +M+ C P V+Y + I + A ++Y+ M GL P+ +TY+V++ L +
Sbjct: 396 FNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGK 455
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALR 240
AG A ++F +M E G P+ NI+I KA + + + R M+ +
Sbjct: 456 AGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVT 515
Query: 241 YPVFKEALQTFKVADENDSLL 261
Y + E L DE +++
Sbjct: 516 YSIVMEVLGHSGYLDEAEAIF 536
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 1/199 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
FN + ++ G DR TY T++DI +A ++ +++ MQ G++ D TY+ +++ L
Sbjct: 396 FNQMQKA-GCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLG 454
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG + A ++ EM + C P +V+Y + + + A +Y++M G P+
Sbjct: 455 KAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKV 514
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY+++ME L +G +EA IFS+M+ PD+ +L++ KAG + M
Sbjct: 515 TYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAM 574
Query: 233 KENRLALRYPVFKEALQTF 251
L P L F
Sbjct: 575 LHAGLCPNVPTCNSLLSAF 593
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ + +A+ + ++ MQ G D VTY+ VM L ++G +D A I+ EM
Sbjct: 480 TYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEM 539
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K P Y + + V++A + Y+ M+ GL PN T L+ +R +
Sbjct: 540 KRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRL 599
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+A + M G+ P +L+ C +A
Sbjct: 600 PDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEA 631
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 4/198 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V IL + K VAI+ LL ++ Q + +I + A+ F K
Sbjct: 344 MVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAG 403
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K E+ + M AG S + +++I+ LG A A
Sbjct: 404 CEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAAD 463
Query: 416 KIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F + E Q C TY +I + A + ALK+Y+ M G P T+++++
Sbjct: 464 KLFCEMIE-QGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 522
Query: 473 LEKLGRVSDAEIYRKEKK 490
L G + +AE E K
Sbjct: 523 LGHSGYLDEAEAIFSEMK 540
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 59/124 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D+ TY+ ++++ G + + + +F M+ K D Y ++ AG+V+ A
Sbjct: 508 GFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKA 567
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M P + + + + +R+ +A ++ + M+ GL P+ TYT+L+
Sbjct: 568 WEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSC 627
Query: 181 LVRA 184
A
Sbjct: 628 CTEA 631
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++GIL + F + +++++M + G V LIH G A A ++F+ +
Sbjct: 341 YTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQM- 399
Query: 423 EDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ C TY LI ++ AG + A+++Y+ M G+ P T++V++ L K G +
Sbjct: 400 QKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHL 459
Query: 480 SDAE 483
+ A+
Sbjct: 460 AAAD 463
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 113/321 (35%), Gaps = 55/321 (17%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G + YTYT ++ L RA ++ ++ +M G QP N LI
Sbjct: 333 GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHS---------- 382
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
Y + N L VF Q K E D + + + N A+E
Sbjct: 383 -----YGRANYLNDAVEVFN---QMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRM 434
Query: 286 IEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
LS D ++ L K +L A D L ++++ + + +I + R
Sbjct: 435 QAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNY 494
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
AL + ++ Y ++ +L + I EM +
Sbjct: 495 QNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKR------------- 541
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
+ VP ++ LL + ++ AG+ +KA + Y+ M G+ P
Sbjct: 542 -------KNWVPDEPVYGLL-------------VDLWGKAGNVEKAWEWYQAMLHAGLCP 581
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
++ T N LL+ ++ R+ DA
Sbjct: 582 NVPTCNSLLSAFLRVNRLPDA 602
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 227/525 (43%), Gaps = 36/525 (6%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L +K D V +VLK + FF W + R F HD T
Sbjct: 38 RILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEINVKIQFFKWAGKRRNFEHDLTT 97
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ + M K + E+++ I + V+ L A V+ A++++ ++
Sbjct: 98 YMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQI 157
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K ++C PT +Y + + +L ++ ++Y EM G P+ TY+VL+ V+ G+
Sbjct: 158 KSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGR 217
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A+ +F +M+ G+ P L+ K+G+ + + L+ + MK+ A + E
Sbjct: 218 DDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKALGLV-QEMKDKGCAPTVFTYTE 276
Query: 247 ALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFV--TTDIEGPLSI-DQGLVLI 299
++ +V D L + P+ + N+ + +E L + DQ +
Sbjct: 277 LIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQ--MRS 334
Query: 300 LLKKKNLVAIDSLLSGIMD-----------------KSIQLDSAVISTIIEVNCDHRRRD 342
L N+V ++++ + + + S S +I+ C R +
Sbjct: 335 LKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVE 394
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
ALL E + AY +LI L K + E+ E+ + + A++I
Sbjct: 395 KALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMI 454
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGI 459
LG RP A +F+ + + C Y AL+ AG ++A +TM G
Sbjct: 455 KNLGKCGRPSEAVDLFNEM-KKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGC 513
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
P L + N++L GL + GR A E++ K K S I+ DA+S + +
Sbjct: 514 TPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTI 558
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA L + +GF Y ++++ G+AKR + +F ++E A Y
Sbjct: 393 VEKALLLLEEMDE-KGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYA 451
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G AV+++ EMK C P + +Y A M L ++EA + M +
Sbjct: 452 VMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEEN 511
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ ++ +++ L R G+ E+A E+F KM+++ ++PD + N ++ ++G
Sbjct: 512 GCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEA 571
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADEND 258
++R M + + L+ DE+D
Sbjct: 572 AKLMREMGSRGFEYDHITYSSILEAVGKVDEDD 604
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 201/475 (42%), Gaps = 66/475 (13%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTYT+++ + K + + +F M KG + V+YT+++H A VD A
Sbjct: 234 GLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEA 293
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +M C+PT+ +YT + L R EA +++KEM ++ PN +TYTVL+
Sbjct: 294 LKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICS 353
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +++A +I + M E G+ P N LI+ CK G + + + IL M+ N +
Sbjct: 354 LCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPN 413
Query: 241 YPVFKEALQTF---KVADENDSLLWQ-VHPQFSPEFISDN-------------DAVEFVT 283
+ E + F K + SLL + + + P ++ N A + ++
Sbjct: 414 ARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLS 473
Query: 284 TDIEGPLSIDQ---GLVLILLKKKNLV-AIDSLLSGIMDKSIQLDSAVISTIIEVNCD-H 338
E L D+ + + L K+ LV SL + +K I+ + + ST+I+ C
Sbjct: 474 LMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVG 533
Query: 339 RRRDG----------------------------------ALLAFEYSVKMDLNLERTAYL 364
+ DG A L + +K D+ Y
Sbjct: 534 KVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYT 593
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH------RLGSARRPVPAAKIF 418
LI L+K + F + ++ ++M G V++ IH RL A +
Sbjct: 594 ILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAK 653
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++P+ T YT I Y GS D A I K M G PS T++ L+ L
Sbjct: 654 GIMPD----TMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 103/513 (20%), Positives = 196/513 (38%), Gaps = 49/513 (9%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
D + ++ IL W L KNL ++ + + + A FFNW+ + G
Sbjct: 47 HDIPAQLFSILSRPNWQKHPSL-KNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHG 105
Query: 62 FNHDRFTYTTMLDIF--------GEAKRISSMK---------YVFELMQEKGINIDAV-- 102
F H+ ++ +ML+I E RI +K +V E+++ +DA
Sbjct: 106 FKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKF 165
Query: 103 -----TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
Y ++ LS +D +++ EM P I + + V EA
Sbjct: 166 KLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAEL 225
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+++Q GL + +TYT L+ R + A IF M G ++ + LI C
Sbjct: 226 YVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFC 285
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
+A + + M E+ +P ++T+ V +++ + Q + + N
Sbjct: 286 EARRVDEALKLFSQMHEDNC---WP----TVRTYTV------IIFAL-CQLGRKTEALNM 331
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
E + + L+ L + N +L+G+++K + + +I+ C
Sbjct: 332 FKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCK 391
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
AL + + Y LI + K ++ +M + V
Sbjct: 392 KGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVT 451
Query: 398 GALLIH------RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
+LIH LGSA + + L+P++ TY+ I G ++A ++
Sbjct: 452 YNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEW----TYSVFIDTLCKRGLVEEARSLF 507
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+++ KGI + ++ L+ G K+G+VSD
Sbjct: 508 ESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRF 540
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 82/208 (39%), Gaps = 31/208 (14%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + D F YT + + R+ + + M KGI D + YT + G +D
Sbjct: 617 STGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSID 676
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT---------------------- 156
GA I + M C P+ +Y+ +K L N + KE +
Sbjct: 677 GAFGILKRMHEVGCEPSYYTYSCLIKHLS-NAKPKEVSSSSELSDLSSGVASNDFSNCWR 735
Query: 157 --------DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
D++ +M + G PN TY + L + G E A +F M+E G P++
Sbjct: 736 RVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDI 795
Query: 209 CNILIEKCCKAGETRTIILILRYMKENR 236
N L+ C+ G I L M ENR
Sbjct: 796 YNSLLGCSCQLGLYGEAIRWLDIMIENR 823
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 27 LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
+P +W L +E+A F + + +G + Y+T++D + + ++S +
Sbjct: 481 VPDEWTYSVFIDTLCKRGLVEEARSLFESL-KEKGIKANEVIYSTLIDGYCKVGKVSDGR 539
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
++ + M G +++TY S++ + A + + M ++ P +YT + L
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNL 599
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+D +A D++ +M+ G P+ + YT + G+ ++A + KM G+ PD
Sbjct: 600 LKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDT 659
Query: 207 AACNILIEKCCKAGETRTIILILRYMKE 234
+ I+ + G IL+ M E
Sbjct: 660 MLYTLFIDAYGRFGSIDGAFGILKRMHE 687
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 78/156 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TY +++D + + K + + ++M ++ I A TYT ++ L + D
Sbjct: 547 SAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFD 606
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++++M +P + YTA++ + R+K+A + +M +G+ P+ YT+ +
Sbjct: 607 QAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ R G + A I +M E G +P + LI+
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIK 702
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 190/451 (42%), Gaps = 65/451 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R + D ++Y ++D +A +++ + +F+ + G+ V YTS++H L A D
Sbjct: 317 RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 376
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ +M + C P+ V+Y + ++EA D+ K+MI+ G P+ TY +M+
Sbjct: 377 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 436
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL---------IEKCCKAGETRTIILILR 230
L ++ + EEAL +F++M+ G P++ + N + I++ C+ G+ +L+
Sbjct: 437 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLK 496
Query: 231 YMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDI 286
M ++ + Y L + D+ LL V Q P ++ N T I
Sbjct: 497 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN-------TLI 549
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
G L K + +L ++ D +T++ +C + + A
Sbjct: 550 HG-----------LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 598
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
V L Y AL+ L K N P+ + +M +G + ++
Sbjct: 599 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF---------- 648
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
TYTALI + SAG D LK++ M GI P +
Sbjct: 649 -----------------------TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 685
Query: 467 NVLLAGLEKLGRVSDA-EIYRKEKKSIQADA 496
L A L K GR + A EI R+ ++S++++A
Sbjct: 686 GTLAAELCKSGRSARALEILREGRESLRSEA 716
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T T++ +A RI + V + M G + D VTY +++H AG + A + +M
Sbjct: 544 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 603
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +V+YTA + L +R+ EA V+ +M G PN +TYT L+ AG+
Sbjct: 604 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 663
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ L++F +M AG+ PD L + CK+G + + ILR E R +LR + +
Sbjct: 664 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR---EGRESLRSEAWGDE 720
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISD 275
+ F V D LL + + F+ D
Sbjct: 721 VYRFAV----DGLLEAGKMEMALGFVRD 744
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + D TY T++ A + + + M +G+ + VTYT+++ L A +
Sbjct: 570 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 629
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ +MK C P + +YTA + +V ++ EM+ G+ P+ Y L
Sbjct: 630 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 689
Query: 179 EYLVRAGKYEEALEIFSKMQEA 200
L ++G+ ALEI + +E+
Sbjct: 690 AELCKSGRSARALEILREGRES 711
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + TYT ++ +A R+ VF M+ G + TYT+++ +AG VD
Sbjct: 605 ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 664
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ--RGLPPNCYTYTV 176
G + ++ EM P V Y L + R A ++ +E + R Y
Sbjct: 665 GGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRF 724
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ L+ AGK E AL M G P C L+ CK+G+
Sbjct: 725 AVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 769
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 41/422 (9%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M ++GI + +TSV+ N G AV I+ M+ EC+ Y +L +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLME--ECHS---PYPDVYNVLIDSLS 55
Query: 152 VKEATDVYKEMIQ----RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++ T+ K+M+Q RG P+ +T+T ++ L +AGK +EA + +M+ + P A
Sbjct: 56 KRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFA 115
Query: 208 ACNILIEKCCKAGETRTIILILRYMK-ENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
+ L + C G +L M N A Y + AL D+ L +
Sbjct: 116 TSSFLAHELCLRGSMERAFQLLEIMPVANSSA--YNIVVVALCKAARVDDALELARTMSE 173
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN--LVAIDSLLSGI-----MDK 319
+ P D+V D ID+ L + ++ LV ++ LL G +DK
Sbjct: 174 KRIPLAAGSLDSVLVGLMDSG---RIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDK 230
Query: 320 SIQL-----------DSAVISTIIEVNCDHRRRDGALLAF------EYSVKMDLNLERTA 362
+ +L D T+++ C R + A+ F S
Sbjct: 231 ARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRG 290
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I L + + + ++ E+M + S + +LI L A + A +F L
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
T YT+LI A S D A +++ M R+G PS T+NV++ K G +
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410
Query: 481 DA 482
+A
Sbjct: 411 EA 412
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 176/447 (39%), Gaps = 45/447 (10%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+T+++ + R +F LM+E V Y ++ LS + + + + M
Sbjct: 13 FTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV-YNVLIDSLSKRQETEAVKKMVQVMV 71
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ C+P ++T + L ++ EA V EM R +PP T + L L G E
Sbjct: 72 DRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSME 131
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A ++ M A + +A NI++ CKA + + R M E R+ L L
Sbjct: 132 RAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVL 187
Query: 249 QTFKVADENDSLLWQVHPQ--FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ D L QV+ + P ++ N +E + + +D+ L+
Sbjct: 188 VGLMDSGRIDEAL-QVYRENRREPCLVTLNVLLEGFCSRGQ----VDKARELLRAMPDEE 242
Query: 307 VAID-----SLLSGIMDKSIQLDSAV-----------------------ISTIIEVNCDH 338
A D ++L G+ K+ +++ AV + +I C +
Sbjct: 243 CAPDEVSYCTVLDGLC-KAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQN 301
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R D A+ FE + +++ + +Y LI L K + +++ +G +
Sbjct: 302 DRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAY 361
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMC 455
LIH L A A ++F+ + + C TY +I G ++A + K M
Sbjct: 362 TSLIHGLCMANSFDDARELFADM-NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 420
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G P + T+N ++ GL K RV +A
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEA 447
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 410 RPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS----ADKALKIYKTMCRKGIHPSLGT 465
R A KIFSL+ E C + Y + V + S + K+ + M +G P T
Sbjct: 25 RTFEAVKIFSLMEE---CHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFT 81
Query: 466 FNVLLAGLEKLGRVSDAEIYRKEKKS 491
F +L GL K G++ +AE+ E +S
Sbjct: 82 FTTILCGLCKAGKMDEAELVMDEMRS 107
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 209/468 (44%), Gaps = 45/468 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A +F + S+GF+ D +TYT ++ R+ + E M + + + VTYT
Sbjct: 27 LEQALIFLGKMV-SKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G VD AV + +M+ K+C PT V+Y + + L +R EA D+ +EM+
Sbjct: 86 VLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ +TYT L+ ++ K ++AL +F ++ G +PD + LI+ CK G +
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 226 I-LILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEF 281
I L R +K + + F DE +LL ++ E S D V +
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM-----AETGSSPDVVTY 259
Query: 282 VTTDIEGPLSI----DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
TT + G + D +L + +K L + +MD + + +S + + +
Sbjct: 260 -TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR--LSDAVHILGE 316
Query: 338 HRRRDGALLAFEYSV--------------------KMDLNLERTAYLALIGILIKLNTFP 377
RR+ + + Y+ +MD ++ +I L K+N
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSS 376
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTAL 434
+ E+VEE + + V + +I L ++ A +++ + E+ C + TY+ L
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I +AG D+A + KG P++GT+N+L+ K R DA
Sbjct: 437 ITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDA 480
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 165/390 (42%), Gaps = 28/390 (7%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D VTYTS++ L ++ A+ +M K +P + +YTA + L + +R+ EA
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+EM R L PN TYTVL++ L + G+ +EA+ + SKM++ V P N LI CKA
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL----WQVHPQFSPEFISD 275
+L M + + + F + ++D L V F P+ ++
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ ++ + EG L AID I S ++ +++I
Sbjct: 189 SCLIDGLCK--EGRLK---------------EAIDLFGRMIKSGSCMPNTVTYNSLISGF 231
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C + D A+ E + + + Y L+ KL +++ +MT+ G + V
Sbjct: 232 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDV 291
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYK 452
L+ L R A I + + C+ TY ++ Y A ++A K
Sbjct: 292 VTFTSLMDGLCRENRLSDAVHILGEM-RRKSCSPTVYTYNTILDGYCRANQLEEARKFM- 349
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ P++ +FN+++ GL K+ R S+A
Sbjct: 350 -LEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 132/357 (36%), Gaps = 59/357 (16%)
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C V+YT+ ++ L R+++A +M+ +G P+ YTYT ++ L + EA
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+ +M + P+ +LI+ CK G
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGR------------------------------ 96
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
DE +LL ++ + P ++ N L+ L K +
Sbjct: 97 --VDEAVALLSKMRKKCVPTAVTYN------------------SLISGLCKAERASEAYD 136
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
LL ++ D +T+I C ++ D AL FE V + Y LI L
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLC 196
Query: 372 KLNTFPKVAEIVEEMTKAGHSL--GVYLGALL--IHRLGSARRPVPAAKIFSLLPEDQKC 427
K + ++ M K+G + V +L+ R+G A + + E
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE---AMNLLERMAETGSS 253
Query: 428 --TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TYT L+ + D A + M RKG+ P + TF L+ GL + R+SDA
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 34/167 (20%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+TY T+LD + A ++ + +++E + V++ ++ L A+ + EE
Sbjct: 327 YTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEE 384
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM------------------------ 162
+ + C P +V YT + L +V EA VY++M
Sbjct: 385 ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAG 444
Query: 163 --------IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
I++G PN TY +L++ +A + E+A E+ M + G
Sbjct: 445 MLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 212/472 (44%), Gaps = 56/472 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY+T++ RIS ++F MQ+ G DA+TY ++M L G+++
Sbjct: 83 RGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINI 142
Query: 120 AVNIWEEMKLK------ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
A+ + +EM +C PT++SY+ + L + R EA +++KEM +G+ P+ +
Sbjct: 143 ALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVIS 202
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET----------- 222
YT L+ +GK+E+A +F++M + G+QPD +LI+ CK G+
Sbjct: 203 YTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMV 262
Query: 223 -RTIIL-ILRYMKENR-LALRYPVFKEALQTF----KVADENDSLLW------------- 262
R IL I+ Y + L +++ + EA Q F K+ D++ +
Sbjct: 263 HRGCILDIVTYSTLIKGLCMKHRI-SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKI 321
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ E + ND ++ I ++ L+ IL K+ ++ + LL ++ +
Sbjct: 322 NIALHLHQEML--NDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 379
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
LD ST+I+ C R A F K+ + Y L+ L + ++
Sbjct: 380 LDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQL 439
Query: 383 VEEMTKAGHSLGVYLG------ALLIHRLGSARRPVPAAKIF------SLLPEDQKCTAT 430
+EM G+ +++I L RR A ++F ++P+ +
Sbjct: 440 HQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD----VIS 495
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
YT LI + +G +KA ++ M GI P + T +VL+ L K G+V +A
Sbjct: 496 YTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 547
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 187/469 (39%), Gaps = 50/469 (10%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY+T++ RIS +F M++ G DA+ Y ++M L G ++
Sbjct: 264 RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINI 323
Query: 120 AVNIWEEM-------KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
A+++ +EM +K P + + + + IL +V EA ++ + MIQRG +
Sbjct: 324 ALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV 383
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY+ L++ L + EA +F MQ+ G +PD L++ C+ G + + + M
Sbjct: 384 TYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM 443
Query: 233 ---------KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAV--- 279
K + Y + + L + DE L ++ Q P+ IS +
Sbjct: 444 LNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGF 503
Query: 280 --------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
E + I+ ++ L+ +L KK ++ + LL ++ + LD
Sbjct: 504 CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDV 563
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+T+++ C R A F K+ L+ L + E+ +
Sbjct: 564 VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKN 623
Query: 386 MTKAGHSLGVYL------------GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA 433
M G+ G R AR K ++P+ +YT+
Sbjct: 624 MLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPD----VISYTS 679
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
LI + +G A ++ M G+ P + TF+VL+ L K G+V +A
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEA 728
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D +YT+++ F + + KY+F M + G+ D T++ ++ L G V
Sbjct: 666 KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKV 725
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + E M + C P V+YT +K L +NDR+ EAT ++ +M + G P+ TY L
Sbjct: 726 IEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTL 785
Query: 178 MEYLVRAGKYEEALEIFSKMQE------AGVQPDKAACNILIEKCCKAG 220
M+ L + G + ALE+ KM +PD + +I+I+ CK G
Sbjct: 786 MKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHG 834
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TYTT++ RIS +F MQ+ G D VTY ++M L G++
Sbjct: 738 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 797
Query: 120 AVNIWEEM---------KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
A+ + ++M K P ++SY+ + L + R EA +++KEM G+ PN
Sbjct: 798 ALELHKKMLSDTGQYGTNFK---PDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 854
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+YT L+ R+GK E+A +F++M + GVQ + +++I CK G+
Sbjct: 855 VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 905
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 28/292 (9%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ +Y+ ++D + R + +F+ M+ G+ D ++YTS++H +G A ++
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 697
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM P + +++ + +L +V EA ++ + MIQRG PN TYT L++ L
Sbjct: 698 NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 757
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL------- 237
+ EA ++F KMQ+ G PD L++ C+ G +T + + + M +
Sbjct: 758 DRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 817
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y + + L DE L ++ P IS T+ I G
Sbjct: 818 PDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVIS-------YTSLIHG------ 864
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
+ L L + ++D+ +QL++ S +I C + D AL
Sbjct: 865 -----FCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKALF 911
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 177/435 (40%), Gaps = 19/435 (4%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++G D +YT+++ F + + K +F M + GI D T ++ G V
Sbjct: 192 KAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKV 251
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + E M + C IV+Y+ +K L + R+ EAT ++ M + G P+ Y L
Sbjct: 252 IEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTL 311
Query: 178 MEYLVRAGKYEEALEIFSKM----QEAGVQ---PDKAACNILIEKCCKAGETRTIILILR 230
M+ L + GK AL + +M + G++ PD ++LI+ CK G+ +L
Sbjct: 312 MKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLE 371
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
M + L + ++ + W + DA+ + T ++G
Sbjct: 372 VMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSM--QKLGCRPDAITYGTL-MKGLC 428
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
G + I L+ + D+ GI K + ++ II+ C RR D A FE
Sbjct: 429 Q--TGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI---IIDGLCKDRREDEARELFEE 483
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ + +Y LI + K + EM G V ++LI L +
Sbjct: 484 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 543
Query: 411 PVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
+ A K+ ++ + + C T T L+ KA +++ M + G P++ T
Sbjct: 544 VIEANKLLEVVIQ-RGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCA 602
Query: 468 VLLAGLEKLGRVSDA 482
L+ GL + G + A
Sbjct: 603 TLMKGLCQSGNIKIA 617
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 188/451 (41%), Gaps = 40/451 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++G D +YTT++ F + + K +F M + GI D T + ++ L G V
Sbjct: 485 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKV 544
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + E + + C +V+ T +K L + R+ +AT ++ +M + G PN T L
Sbjct: 545 IEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 604
Query: 178 MEYLVRAGKYEEALEIFSKMQE------AGVQPDKAACNILIEKCCKAGETRTIILILRY 231
M+ L ++G + ALE+ M +P+ + +I+I+ CK G
Sbjct: 605 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRE--------- 655
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV--EFVTTDIEGP 289
E R +FKE ++ V + S +H D + E V ++
Sbjct: 656 -DEAR-----ELFKE-MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 708
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
++ L+ +L K+ ++ + LL ++ + ++ +T+++ C + R A F
Sbjct: 709 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 768
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM-TKAGH----------SLGVYLG 398
K+ + Y L+ L + E+ ++M + G S + +
Sbjct: 769 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 828
Query: 399 ALLIH-RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L H R AR K ++P +YT+LI + +G + A ++ M +
Sbjct: 829 GLCKHGREDEARELFKEMKALGVIPN----VISYTSLIHGFCRSGKLEDAKHLFNEMVDQ 884
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G+ + T++V++ G K G++ A + E
Sbjct: 885 GVQLNAVTYSVMIHGFCKEGQIDKALFQKME 915
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/462 (19%), Positives = 173/462 (37%), Gaps = 64/462 (13%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D FT+ +++ KR++ + +G D VTY+
Sbjct: 2 RLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSI----------- 50
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
P + + + + IL +V EA ++ + MIQRG + TY+ L
Sbjct: 51 ---------------RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 95
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM----- 232
++ L + EA +F MQ+ G +PD L++ C+ G + + + M
Sbjct: 96 IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 155
Query: 233 ----KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAV-------- 279
K + Y + + L + DE L ++ Q P+ IS +
Sbjct: 156 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGK 215
Query: 280 ---------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
E + I+ ++ L+ + K+ ++ + LL ++ + LD ST
Sbjct: 216 WEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYST 275
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I+ C R A F K+ + AY L+ L + + +EM
Sbjct: 276 LIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT 335
Query: 391 HSLG-------VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFS 440
G V ++LI L + + A ++ ++ + + C TY+ LI
Sbjct: 336 SQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQ-RGCILDIVTYSTLIKGLCM 394
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+A ++ +M + G P T+ L+ GL + G ++ A
Sbjct: 395 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIA 436
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 209/468 (44%), Gaps = 45/468 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A +F + S+GF+ D +TYT ++ R+ + E M + + + VTYT
Sbjct: 27 LEQALIFLGKMV-SKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYT 85
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G VD AV + +M+ K+C PT V+Y + + L +R EA D+ +EM+
Sbjct: 86 VLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ +TYT L+ ++ K ++AL +F ++ G +PD + LI+ CK G +
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 226 I-LILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEF 281
I L R +K + + F DE +LL ++ E S D V +
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM-----AETGSSPDVVTY 259
Query: 282 VTTDIEGPLSI----DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
TT + G + D +L + +K L + +MD + + +S + + +
Sbjct: 260 -TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR--LSDAVHILGE 316
Query: 338 HRRRDGALLAFEYSV--------------------KMDLNLERTAYLALIGILIKLNTFP 377
RR+ + + Y+ +MD ++ +I L K+N
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSS 376
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTAL 434
+ E+VEE + + V + +I L ++ A +++ + E+ C + TY+ L
Sbjct: 377 EAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL 436
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ +AG D+A + KG P++GT+N+L+ K R DA
Sbjct: 437 VTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDEDA 480
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 165/390 (42%), Gaps = 28/390 (7%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D VTYTS++ L ++ A+ +M K +P + +YTA + L + +R+ EA
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+EM R L PN TYTVL++ L + G+ +EA+ + SKM++ V P N LI CKA
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL----WQVHPQFSPEFISD 275
+L M + + + F + ++D L V F P+ ++
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ ++ + EG L AID I S ++ +++I
Sbjct: 189 SCLIDGLCK--EGRLK---------------EAIDLFGRMIKSGSCMPNTVTYNSLISGF 231
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C + D A+ E + + + Y L+ KL +++ +MT+ G + V
Sbjct: 232 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDV 291
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYK 452
L+ L R A I + + C+ TY ++ Y A ++A K
Sbjct: 292 VTFTSLMDGLCRENRLSDAVHILGEM-RRKSCSPTVYTYNTILDGYCRANQLEEARKFM- 349
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ P++ +FN+++ GL K+ R S+A
Sbjct: 350 -LEEMDCPPNVVSFNIMIRGLCKVNRSSEA 378
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 132/357 (36%), Gaps = 59/357 (16%)
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C V+YT+ ++ L R+++A +M+ +G P+ YTYT ++ L + EA
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+ +M + P+ +LI+ CK G
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGR------------------------------ 96
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
DE +LL ++ + P ++ N L+ L K +
Sbjct: 97 --VDEAVALLSKMRKKCVPTAVTYN------------------SLISGLCKAERASEAYD 136
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
LL ++ D +T+I C ++ D AL FE V + Y LI L
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLC 196
Query: 372 KLNTFPKVAEIVEEMTKAGHSL--GVYLGALL--IHRLGSARRPVPAAKIFSLLPEDQKC 427
K + ++ M K+G + V +L+ R+G A + + E
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE---AMNLLERMAETGSS 253
Query: 428 --TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TYT L+ + D A + M RKG+ P + TF L+ GL + R+SDA
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 34/167 (20%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+TY T+LD + A ++ + +++E + V++ ++ L A+ + EE
Sbjct: 327 YTYNTILDGYCRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEE 384
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM------------------------ 162
+ + C P +V YT + L +V EA VY++M
Sbjct: 385 ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAG 444
Query: 163 --------IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
I++G PN TY +L++ +A + E+A E+ M + G
Sbjct: 445 MLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 210/491 (42%), Gaps = 34/491 (6%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V +VL+ ++KA FF+W + G+ H +FT +L F K+ +F+ +
Sbjct: 102 VGRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCG 161
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
+ D++TY+++++ A D A + +EM+ + P Y +K L N RV A
Sbjct: 162 LCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA 221
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
Y++M QR P+ TYT+L++ L ++ + +A I M EAG P+ N LI
Sbjct: 222 LVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 280
Query: 216 CCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPE 271
CK G +++ M EN + Y + + + + LL + V P
Sbjct: 281 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 340
Query: 272 FISDNDAVEFVTTDIEGPLSIDQ-GLVLILLKKK--------NLVAID------------ 310
FI+ N ++ + ++ ID L ++L++ NL+ ID
Sbjct: 341 FITYNTLMDSL---VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLM-IDMFCKVGQLDLAY 396
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
L + D+ D + +I C R D A E + + Y +++ L
Sbjct: 397 ELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 456
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--T 428
K + + E+ E + G+ L V + LI L +RR A K+ + +
Sbjct: 457 CKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDV 516
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
YT LI + A DK+L + M KG P++ T+++++ L K RV D + K
Sbjct: 517 VAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKT 576
Query: 489 --KKSIQADAL 497
++ + DA+
Sbjct: 577 MLERGVTPDAI 587
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 175/421 (41%), Gaps = 24/421 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D ++ RIS + E M E G + VTY ++++ G++D AV ++ +M
Sbjct: 238 TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 297
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C P + +Y + +R ++ + +EM++ G PN TY LM+ LV++GKY
Sbjct: 298 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 357
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
+A + M +P N++I+ CK G+ + + M + Y +
Sbjct: 358 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIM 417
Query: 245 -KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
A + ++ D L P+ ++ N SI GL K
Sbjct: 418 ISGACRANRIDDARQLLERMTEAGCPPDVVTYN--------------SIVSGLC----KA 459
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+ + + + LD ST+I+ C RR D A + + AY
Sbjct: 460 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 519
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI K + K EM G V +++I +L + R + + E
Sbjct: 520 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 579
Query: 424 DQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
YT++I + S D+A ++YK M + G P++ T+NVL+ L K+ R+ +
Sbjct: 580 RGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDE 639
Query: 482 A 482
A
Sbjct: 640 A 640
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 195/435 (44%), Gaps = 27/435 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A + FN + + + D FTY ++D + + +R + + M + G + +TY
Sbjct: 287 MDEAVVLFNQMLEN-SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 345
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++M L +G A N+ + M ++C P+ ++ + + ++ A ++++ M R
Sbjct: 346 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 405
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ET 222
G P+ YTY +++ RA + ++A ++ +M EAG PD N ++ CKA E
Sbjct: 406 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 465
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ +LR + + L + D+ + LL ++ S D V +
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP-----DVVAY- 519
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR-R 341
T I G DQ K+L + S ++DK S +I+ C R R
Sbjct: 520 TILIHGFCKADQ-------LDKSL----AFFSEMLDKGCVPTVITYSIVIDKLCKSARVR 568
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
DG +L + ++ + + Y ++I L K +++ + E+ + M + G + V +L
Sbjct: 569 DGCML-LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVL 627
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+ +L R A + ++ D C T TY ++ ++ + DKA ++++ M +G
Sbjct: 628 VDKLCKVSRLDEAIHLLEVMESD-GCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686
Query: 459 IHPSLGTFNVLLAGL 473
P+ +++LL L
Sbjct: 687 CSPTPFMYSLLLTKL 701
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D YT+++D ++ +++LM++ G VTY ++ L +D
Sbjct: 580 RGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDE 639
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+++ E M+ C P V+Y + + + +A +++ M RG P + Y++L+
Sbjct: 640 AIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLT 699
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPD 205
LV K ++A+EI+ + EAG D
Sbjct: 700 KLVAEEKMDQAMEIWEEALEAGADVD 725
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 182/447 (40%), Gaps = 53/447 (11%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
TVN ++ + M + ++ + + GF D+ TY T + + +S V +LM
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
++G + D TY +V++ LS G++D A I +M + C P ++ + L +R+
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA D+ +E+ +GL P+ YT+ +L+ L + G + +F +M+ +G PD+ NIL
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
I+ C G+ + +L+ M+ N + + D+L Q+ + + E
Sbjct: 447 IDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTII---------DALCKQMRIEEAEEV 497
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
DA I + +T+I
Sbjct: 498 FDQMDA----------------------------------------HGISRSAVTFNTLI 517
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C +R D A E VK L Y +++ K K A+I+E MT G
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+ V LI+ L A R A K+ + + Y +I F + AL +
Sbjct: 578 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSL 637
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLG 477
++ M G P T+ ++ GL + G
Sbjct: 638 FREMTEVGEPPDALTYKIVFRGLCRGG 664
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/514 (21%), Positives = 192/514 (37%), Gaps = 67/514 (13%)
Query: 17 WDSAQDLLKN----LPIKWDSYTVNQVLKTHPPMEKAWLF---FNWVSRSRGFNHDRFTY 69
+D A DL++N ++ D+ N +L + L +N ++ RG D T
Sbjct: 140 FDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMT-DRGIQPDVVTL 198
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T++ A ++ + + E M + D T+T++M G ++ A+ + +M
Sbjct: 199 NTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMME 258
Query: 130 KECYPT-----------------------------------IVSYTAYMKILFLNDRVKE 154
C PT V+Y ++ L N V
Sbjct: 259 TGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSH 318
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A V M+Q G P+ +TY ++ L + G+ +EA I ++M + G PD N LI
Sbjct: 319 ALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIV 378
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFI 273
C + + R + L+ F + KV D + + + E
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI------RLFEEMK 432
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
S A + VT +I L+ L LV LL + + +TII+
Sbjct: 433 SSGCAPDEVTYNI---------LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIID 483
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HS 392
C R + A F+ ++ + LI L K E++E+M K G
Sbjct: 484 ALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP 543
Query: 393 LGVYLGALLIH--RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKAL 448
+ ++L H + G ++ AA I + + + TY LI AG AL
Sbjct: 544 SNITYNSILTHYCKQGDLKK---AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVAL 600
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
K+ + M KGI P+ +N ++ L + + DA
Sbjct: 601 KLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA 634
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 187/509 (36%), Gaps = 66/509 (12%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L+ E A N F R Y ++ G A M+ + M+ +G
Sbjct: 63 LREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEA 122
Query: 100 DAVTYTSVMHWLSNAGDVDGAVN-IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
A S + + D AV+ + ++ Y + +L R+K V
Sbjct: 123 GAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESV 182
Query: 159 YKEMIQRGLPPNCY-----------------------------------TYTVLMEYLVR 183
Y EM RG+ P+ T+T LM+ +
Sbjct: 183 YNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIE 242
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALR 240
G E AL + +KM E G P + N+LI CK G + ++ + +
Sbjct: 243 EGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVT 302
Query: 241 YPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y F L Q V+ + + P+ + N + ++ + G L +G+V
Sbjct: 303 YNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN--GELDEAKGIV-- 358
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL-LAFEYSVKMDLNL 358
+ ++D+ D+ +T+I C R + AL LA E +VK L+
Sbjct: 359 --------------NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVK-GLSP 403
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ + LI L K+ + EEM +G + +LI L S + V A +
Sbjct: 404 DVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLL 463
Query: 419 SLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ E C T TY +I ++A +++ M GI S TFN L+ GL K
Sbjct: 464 KEM-ESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCK 522
Query: 476 LGRVSDAE--IYRKEKKSIQADALSKDAV 502
R+ DA I + K+ +Q ++ +++
Sbjct: 523 AKRIDDATELIEQMVKEGLQPSNITYNSI 551
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 7/208 (3%)
Query: 19 SAQDLLKNL-----PIKWDSY-TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTM 72
+A DLLK + P +Y T+ L +E+A F+ + + G + T+ T+
Sbjct: 458 NALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMD-AHGISRSAVTFNTL 516
Query: 73 LDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
+D +AKRI + E M ++G+ +TY S++ GD+ A +I E M
Sbjct: 517 IDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGF 576
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
+V+Y + L R + A + + M +G+ P Y +++ L R +AL
Sbjct: 577 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALS 636
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAG 220
+F +M E G PD I+ C+ G
Sbjct: 637 LFREMTEVGEPPDALTYKIVFRGLCRGG 664
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 60/161 (37%), Gaps = 36/161 (22%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G TY ++L + + + + E M G ID VTY ++++ L AG A
Sbjct: 540 GLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVA 599
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDR----------------------------- 151
+ + M++K PT +Y ++ LF +
Sbjct: 600 LKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRG 659
Query: 152 -------VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+KEA D EM+ +G P ++ +L E L+ G
Sbjct: 660 LCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 700
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 192/449 (42%), Gaps = 53/449 (11%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
S TVN ++ + + + ++ + + GF DR T++T ++ + + V
Sbjct: 266 SVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLG 325
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
LM ++G D TY++V++ L N G+++ A I +M C P ++ + L +
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+++EA D+ +E+ +GL PN YT+ +L+ L + G A+ +F +M+ +G PD+ N
Sbjct: 386 QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYN 445
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
ILI+ C +G+ + +L+ M+ + PQ +
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGC----------------------------PQSTV 477
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ T I+G L K++ + + + + I ++ +T
Sbjct: 478 TY----------NTIIDG-----------LCKRRRIEEAEEVFDQMDVTGIGRNAITFNT 516
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I+ C+ R D A + + L Y +++ K K A+I++ MT G
Sbjct: 517 LIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANG 576
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKAL 448
+ V A LI+ L ARR A K+ + + K T Y +I F + AL
Sbjct: 577 FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDAL 636
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+++ M G P T+ ++ GL + G
Sbjct: 637 SLFREMTEVGGPPDAFTYKIVFRGLCRGG 665
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 157/414 (37%), Gaps = 57/414 (13%)
Query: 77 GEAKRISSMKYVFELMQEK----GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
G R+ F+L+ + G+ + Y ++ L+ + + + EM +
Sbjct: 133 GSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGI 192
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P +V++ + L + + A + +EM + P+ T+T LME V G E AL
Sbjct: 193 EPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALR 252
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+ ++M E G P N+LI CK G +
Sbjct: 253 LKARMSEMGCSPTSVTVNVLINGYCKLG-------------------------------R 281
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
V D + ++ F P D V F T V L + ++ +
Sbjct: 282 VGDALGYIQQEIADGFEP------DRVTFST------------FVNGLCQNGHVDHALKV 323
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
L ++ + + D ST+I C++ + A V + T + LI L
Sbjct: 324 LGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCT 383
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---A 429
N + ++ E+T G S VY +LI+ L P A ++F + + CT
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM-KSSGCTPDEV 442
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TY LI S+G KAL + K M G S T+N ++ GL K R+ +AE
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 163/428 (38%), Gaps = 59/428 (13%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y +L + E +I ++ + M +GI D VT+ +V+ L A A
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA 215
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + EEM + P ++T M+ ++ A + M + G P T VL+
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ +AL + G +PD+ + + C+ G + +L M
Sbjct: 276 YCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLM-------- 327
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+E + P+ + + + + + G L +G+V
Sbjct: 328 ---LQEGCE--------------------PDVYTYSTVINCLCNN--GELEEAKGIV--- 359
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL-LAFEYSVKMDLNLE 359
+ ++D D+ +T+I C + + AL LA E +VK L+
Sbjct: 360 -------------NQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVK-GLSPN 405
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+ LI L K+ + EEM +G + +LI L S+ + AK
Sbjct: 406 VYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK---LAKALD 462
Query: 420 LLPEDQ-----KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
LL E + + T TY +I ++A +++ M GI + TFN L+ GL
Sbjct: 463 LLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLC 522
Query: 475 KLGRVSDA 482
R+ DA
Sbjct: 523 NAERIDDA 530
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T+T L+ + GS + AL++ M G P+ T NVL+ G KLGRV DA Y +++
Sbjct: 233 TFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQE 292
Query: 490 KSIQADALSKDAVPMEEKICDLLYGG 515
AD D V + L G
Sbjct: 293 I---ADGFEPDRVTFSTFVNGLCQNG 315
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 201/451 (44%), Gaps = 17/451 (3%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ +L +++A L FN + + D FTYT+++ +++ VF+ M +
Sbjct: 202 TMINILCKKGKVQEAVLVFNKIFQF-DLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVK 260
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G N ++VTY+++++ L N G + A+++ EEM K PT+ +YT + L RV +
Sbjct: 261 DGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDD 320
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A ++ + M ++G P+ TYT ++ L RAGK E A+ ++ KM + G+ P+ N LI
Sbjct: 321 AINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALIN 380
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
+ C G + I +M+ + + + ++ D+ + + + + +
Sbjct: 381 ELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFN-----KMLK 435
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
D + VT + L++ LK+ L L + + + + D +I
Sbjct: 436 DGPSPTVVTYNT---------LIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISG 486
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C + D A F +K ++ + Y A+I K + E M + G S
Sbjct: 487 FCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSAS 546
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYK 452
+ +I L R A K + + E Q T TYT+LI + + A KI+
Sbjct: 547 IETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFH 606
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
M +K P+ T+ L+ GL + G+V AE
Sbjct: 607 EMEKKNCLPNAHTYTSLIYGLCQEGKVDAAE 637
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 193/480 (40%), Gaps = 51/480 (10%)
Query: 34 YTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ 93
+ V++++ TH + A FF W+S+ + HD + +ML+ + K ++ +V LM
Sbjct: 72 HHVSKIINTHINTDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMI 131
Query: 94 EKGINIDAVT-YTSVMHWLSNAGD----------------------VDGAVNIWEEMKLK 130
+ N D + T +H +S++ V A N++ ++
Sbjct: 132 KACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSS 191
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P+++++ + IL +V+EA V+ ++ Q L P+ +TYT L+ R K ++A
Sbjct: 192 GVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKA 251
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEA 247
E+F +M + G P+ + LI C G + +L M E + Y V +
Sbjct: 252 FEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISS 311
Query: 248 LQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
L D+ +L+ + + SP +V+ T I G L + +
Sbjct: 312 LCDIGRVDDAINLVRSMGKKGCSP-------SVQTYTAIISG-----------LFRAGKM 353
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+ ++ + + ++ + +I C R AL F++ Y +
Sbjct: 354 ELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQI 413
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYL-GALLIHRLGSARRPVPAAKIFSLLPEDQ 425
I L ++ K + +M K G S V L++ L R + A F + ++
Sbjct: 414 IKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENL--KRGYLNNATRFLYMMKES 471
Query: 426 KCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
C TY LI + G D A + M + GI P+ T+ ++ G K G++ A
Sbjct: 472 NCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVA 531
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TYT++++ + + +F M++K +A TYTS+++ L G VD
Sbjct: 576 QGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDA 635
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A E + C PTI +Y+ + L R EA+ + + M ++GL P+ Y L+
Sbjct: 636 A----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLV 691
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
++ K + ALEIF+ M G QP +LI C G +R
Sbjct: 692 AHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLI--CALCGVSR 733
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+T++ R + + E M+EKG++ Y S++ + VD A+ I+ M
Sbjct: 650 TYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLM 709
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+K P + Y + L R +EA ++++ ++++ + +TVL++ L++ G
Sbjct: 710 AVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDS 769
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ ++ M+ P IL + K G++
Sbjct: 770 DLCMKFLYLMESRNCTPSLHTYIILARELSKVGKS 804
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 209/456 (45%), Gaps = 41/456 (8%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTYT+++ + + VF+ M ++G + ++VTY+++++ L N G VD A+++
Sbjct: 232 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEM K PT+ +YT + L + +EA ++ M +RG PN TYT L+ L R
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
GK E A+ ++ KM + G+ P+ N LI + C G T + I +M+ + +
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTY 411
Query: 245 KEALQTFKVAD--ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQGLVLI 299
E ++ + E +L++ + P V T I G L+ ++ L+
Sbjct: 412 NEIIKGLCLGGDIEKAMVLFEKMLKMGPL-----PTVVTYNTLINGYLTKGNVNNAARLL 466
Query: 300 LLKKKNLVAID-----SLLSGIMDKSIQLDSAVISTIIEVNC-------------DHRRR 341
L K+N D L+SG K +L+SA V C D +
Sbjct: 467 DLMKENGCEPDEWTYNELVSGF-SKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSK 525
Query: 342 DG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
DG AL + +M N +Y A+I L K N F + +I ++M + G V
Sbjct: 526 DGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVIT 585
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTM 454
LI L R A KIF + E +KC TY++LI G AD+A + M
Sbjct: 586 YTTLIDGLCRNGRTQFAFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADEA----ERM 640
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
G P+L T++ L++GL + GR +AE K+ K
Sbjct: 641 SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D +TY ++ F + ++ S + F+ M E G+N + V+YT+++ S G V
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+++ + M+ C P + SY A + L +R EA + +M+++GL PN TYT L
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ L R G+ + A +IF M++ P+ + LI C+ G+
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 119/576 (20%), Positives = 206/576 (35%), Gaps = 121/576 (21%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
+S V IL W + +L K L + ++ V +++ H E FF W+S+ + H
Sbjct: 48 VSRVCAILSRVQWKGSSEL-KQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKH 106
Query: 65 DRFTYTTMLD------IFGEA------------------------KRISSMKYVFEL--- 91
+ + +ML+ +F A IS M + F L
Sbjct: 107 NMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSC 166
Query: 92 ----------------------MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
M GI +T+ ++++ LS G V A I ++
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ P + +YT+ + N + A V+ M++ G PN TY+ L+ L G+ +E
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
AL++ +M E G++P + I C I ++ MK+ + +Q
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGC-------RPNVQ 339
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
T+ S L G L + GL +LK+
Sbjct: 340 TYTALISGLSRL--------------------------GKLEVAIGLYHKMLKE------ 367
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
G++ ++ ++ +I C R AL F + Y +I
Sbjct: 368 -----GLVPNTVTYNA-----LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 417
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
L K + E+M K G V LI+ + AA++ L+ E+ C
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN-GCEP 476
Query: 430 ---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA--EI 484
TY L+ + G + A ++ M G++P+ ++ L+ G K G+V A +
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLL 536
Query: 485 YRKEKKSIQADALSKDAV----------PMEEKICD 510
R E+ + S +AV EKICD
Sbjct: 537 KRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 170/431 (39%), Gaps = 26/431 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG + TYT ++ ++ ++ M ++G+ + VTY ++++ L G
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ I+ M+ +Y +K L L +++A ++++M++ G P TY L
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--- 234
+ + G A + M+E G +PD+ N L+ K G+ + + M E
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
N + Y + D SLL ++ E + N VE I G
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRM------EEMGCNPNVESYNAVING------ 557
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L K+ + + ++++ + + +T+I+ C + R A F K
Sbjct: 558 -----LSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
Y +LI L + A+ E M++ G + + L+ L R A
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGK----ADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEA 668
Query: 415 AKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++ + E C Y +L+ + D ALKI+ ++ KG L + L+
Sbjct: 669 EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICA 728
Query: 473 LEKLGRVSDAE 483
L K G+V +A+
Sbjct: 729 LCKAGQVEEAQ 739
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 39/209 (18%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TYTT++D R +F M+++ + TY+S+++ L G D
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN--------- 170
A E M C PT+ +Y+ + L R EA + K+M +RG P+
Sbjct: 637 A----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 692
Query: 171 --CYT------------------------YTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
C Y L+ L +AG+ EEA +F M E
Sbjct: 693 AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNA 752
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMK 233
D+ +L++ K GE + +L M+
Sbjct: 753 DEIVWTVLVDGLLKEGELDLCMKLLHIME 781
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 60/141 (42%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RGF DR Y ++L + + +F ++ KG + Y +++ L AG V
Sbjct: 676 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 735
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A +++ M KE + +T + L + + M + PN TY +L
Sbjct: 736 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795
Query: 178 MEYLVRAGKYEEALEIFSKMQ 198
L R GK E+ + K++
Sbjct: 796 GRELSRIGKSIESEPLADKLK 816
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 198/495 (40%), Gaps = 76/495 (15%)
Query: 17 WDSA-----QDLLKNLPIKWDSYTVNQVLKTHPP-------------------MEKAWLF 52
WDS ++LL+ + + + V+ VL T P KA
Sbjct: 9 WDSGLTESGEELLRKIVVLPNDECVSSVLTTSEPNLSSSELLSIMKGLGREGQWNKALEV 68
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
FNW+ +S F D T ML I G +++++ +F+ ++E+G +D YTS++ LS
Sbjct: 69 FNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALS 128
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT-DVYKEMIQRGLPPNC 171
A+ +E+MK P++V+Y + + R E ++++EM +G+ P+
Sbjct: 129 RNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDE 188
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
YTY + EEA E+F++M+ + PD+ N L++ KAG +L+
Sbjct: 189 YTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKE 248
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
M+ + E L F A
Sbjct: 249 MESAGCLPNIVTYNELLSAFGRA------------------------------------- 271
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
GL + K DS++S K I+ D ++++ + + A+ +
Sbjct: 272 ---GLCNAAAEMK-----DSMVS----KGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQM 319
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
+ + ALIG+ K F ++ I E+M G + L+ G
Sbjct: 320 RTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMY 379
Query: 412 VPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
K+F + + + AT+ LI Y GS+D+AL IY M + G P L TFN L
Sbjct: 380 SEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTL 439
Query: 470 LAGLEKLGRVSDAEI 484
LA L + GR AE+
Sbjct: 440 LAALAREGRWEHAEL 454
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 179/440 (40%), Gaps = 25/440 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +L FG A ++ + + M KGI D TYTS++ S AG V+ A+ I+ +M
Sbjct: 260 TYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQM 319
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P ++ A + + N E ++++M G+ P+ T+ L+ + G Y
Sbjct: 320 RTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMY 379
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
E L++F M++AG +PDKA NILIE + G + + I M + F
Sbjct: 380 SEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTL 439
Query: 248 LQTFKVAD--ENDSLLWQV--HPQFSPEFIS---------DNDAVEFVTTDIEGPLSIDQ 294
L E+ L+ + P I+ + +E + ++ +I
Sbjct: 440 LAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYV 499
Query: 295 GLVLILLKKKNLV---------AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
ILLK LV A D+ L+ + D++ + +I + D A
Sbjct: 500 PFTKILLKTFVLVYSKCSLVDEAEDAFLA-MRHHGYLSDTSTFNAMISMYGKKGMMDKAT 558
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F L + Y L+G+ + + K + E AG + + +I
Sbjct: 559 DTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSY 618
Query: 406 GSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ A +IF + + Q + TY +G Y + G +AL + K M + G P
Sbjct: 619 SKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDE 678
Query: 464 GTFNVLLAGLEKLGRVSDAE 483
T+ L+ K+G+ + E
Sbjct: 679 VTYRTLVDAYCKIGKFEEVE 698
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G+ D T+ M+ ++G+ + F L++ G+ D VTY +M G
Sbjct: 530 RHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMY 589
Query: 118 DGAVNIWEEMKLKECY-----PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
E L+EC P +VSY + + ++ AT ++ EM+ G+ P+ +
Sbjct: 590 RKC-----EATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSF 644
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY + V G + EAL + M + G +PD+ L++ CK G+ + IL+++
Sbjct: 645 TYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFI 704
Query: 233 KEN 235
K +
Sbjct: 705 KSS 707
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 1 MRDTISNVY----KIL---------KYSTWDSAQDL---LKNLPIKWDSYTVNQVLKTHP 44
M DT+ +Y KIL K S D A+D +++ D+ T N ++ +
Sbjct: 490 MVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYG 549
Query: 45 P---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDA 101
M+KA F + RS G D TY ++ ++G + G D
Sbjct: 550 KKGMMDKATDTFALL-RSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDL 608
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
V+Y +V+ S G + A I+ EM P +Y ++ EA V K
Sbjct: 609 VSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKH 668
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
M + G P+ TY L++ + GK+EE I ++ + KAA
Sbjct: 669 MHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAA 715
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/523 (22%), Positives = 219/523 (41%), Gaps = 31/523 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L +K D + V +V+KT + FF W ++ R + HD T
Sbjct: 62 RILKIFKWGPDAEKALEVLMLKVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYEHDTST 121
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ ++ M K + E+++ + + + ++ L NA + AV I+ ++
Sbjct: 122 YMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQI 181
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K+++C PT +Y + + +L + ++ ++Y EM G P+ TY+ L+ + G+
Sbjct: 182 KVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGR 241
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A+ + ++M++ G+QP +LI K + + M+ + E
Sbjct: 242 QDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTE 301
Query: 247 ALQTFKVADENDSLLWQVHPQ----FSPEFISDNDAVEFVTTD----------------- 285
++ A D H P+ + N+ + F+
Sbjct: 302 LIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQ 361
Query: 286 -IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
I ++ + + + K + I S + I S +I+ C R + A
Sbjct: 362 CIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKA 421
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
++ E + AY +LI L K + E+ +E+ + S + A++I
Sbjct: 422 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKH 481
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LG A R A +F + CT Y AL+ AG D+AL + M G P
Sbjct: 482 LGKAGRLDDAVNLFDEM-NKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIP 540
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ ++N++L GL K G A E+ K+S I+ DA+S + V
Sbjct: 541 DINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTV 583
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKA + + +GF Y +++D G+AKR +F+ ++E + A Y
Sbjct: 419 EKAMMLLEEMD-EKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAV 477
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L AG +D AVN+++EM C P + +Y A M L + EA + M + G
Sbjct: 478 MIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHG 537
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
P+ +Y +++ L + G A+E+ S M+++ ++PD + N ++ AG
Sbjct: 538 CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAG 591
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y M+ G+A R+ +F+ M + G + Y ++M L+ AG +D A+ M+
Sbjct: 475 YAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQ 534
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P I SY + L A ++ M Q + P+ +Y ++ + AG +E
Sbjct: 535 EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFE 594
Query: 189 EALEIFSKMQEAGVQPD 205
EA ++ +M G + D
Sbjct: 595 EAAKLMKEMNVLGFEYD 611
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 47/119 (39%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + Y ++ A + MQE G D +Y +++ L+ G A
Sbjct: 502 GCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRA 561
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + MK P VSY + + +EA + KEM G + TY+ ++E
Sbjct: 562 MEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILE 620
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 192/453 (42%), Gaps = 28/453 (6%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--DAVTY 104
E A F+ + R RG D F+Y +L+ + R + +M + G + D V+Y
Sbjct: 34 EDARHVFDELLR-RGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSY 91
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++V++ GD+D + + EM + P +V+Y + + L V +A +V M++
Sbjct: 92 STVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 151
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
G+ P+C TY ++ +G+ +EA+ KM+ GV+PD N L++ CK G
Sbjct: 152 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 211
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
I M + L + LQ + L ++H V
Sbjct: 212 ARKIFDSMTKRGLKPEITTYGTLLQGYATK----GALVEMHGLLDL----------MVRN 257
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
I + LV K++ + + S + + + ++ +I + C R + A
Sbjct: 258 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 317
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
+L FE + L+ Y +LI L N + + E++ EM G L +I
Sbjct: 318 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 377
Query: 405 LGSARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
R + + K+F L+ P+ TY+ LI Y AG D+A K+ +M G
Sbjct: 378 HCKEGRVIESEKLFDLMVRIGVKPD----IITYSTLIDGYCLAGKMDEATKLLASMVSVG 433
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ P T++ L+ G K+ R+ DA + +E +S
Sbjct: 434 MKPDCVTYSTLINGYCKISRMKDALVLFREMES 466
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/477 (20%), Positives = 192/477 (40%), Gaps = 56/477 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++K + +N + R + + TY +++ +A+ + V M + G+ D +TY
Sbjct: 104 LDKTYSTYNEMLDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYN 162
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++H ++G A+ ++M+ P +V+Y + M L N R EA ++ M +R
Sbjct: 163 SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKR 222
Query: 166 GLPPNCYTYTVLME----------------YLVRAG-------------------KYEEA 190
GL P TY L++ +VR G K EEA
Sbjct: 223 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEA 282
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+ +FSKM++ G+ P+ +I CK+G +L M + L+ V+ +
Sbjct: 283 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 342
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVA 308
++ W+ + E + + F + I+ K+ ++
Sbjct: 343 LCTCNK-----WERAEELILEMLDRGICLNTIFFNSIIDSH-----------CKEGRVIE 386
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ L ++ ++ D ST+I+ C + D A V + + + Y LI
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
K++ + EM +G S + +++ L RR A +++ + + Q
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL 506
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+TY ++ D AL++++ +C + TFN+++ L K+GR +A+
Sbjct: 507 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 563
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A LL ++ +K D T + ++ + M+ A + F + S G + D TY
Sbjct: 420 DEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREM-ESSGVSPDIITYNI 478
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + +R ++ K ++ + + G ++ TY ++H L D A+ +++ + L +
Sbjct: 479 ILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 538
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
++ + L R EA D++ GL PN +TY ++ E ++ G EE
Sbjct: 539 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 598
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++F M++ G D N ++ + + GE L + E +L
Sbjct: 599 QLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 646
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 191/456 (41%), Gaps = 32/456 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TYT+++D G+ KR +F+ M +G+ +D V YT+++ L G + A
Sbjct: 51 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 110
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ M C P +V+ + + L R+ A ++K M RGL PN Y+ L+
Sbjct: 111 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 170
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +A K + ALE+ ++M++A PD N+LI+ CK+G+ M E
Sbjct: 171 LCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPD 230
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFS--------------PEFISDNDAVEFVTTDI 286
+ + F A D+ + + + ++++ N +E +
Sbjct: 231 VYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALM 290
Query: 287 EG--------PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
E ++ L+ L K L LL I+D D +++I+
Sbjct: 291 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 350
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+R A F+ L L+ Y ALI L++ P+ + + + MT G V
Sbjct: 351 KRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL 410
Query: 399 ALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
+ +I L A R A +IF L P + Y+ALI A D AL++
Sbjct: 411 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNE----VVYSALIHGLCKARKMDCALEMLA 466
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
M + P T+N+L+ GL K G V A + E
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 502
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 190/450 (42%), Gaps = 35/450 (7%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+I + E + G TY ++++ L G ++ A+++ ++ C P +V+YT
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ + L R EA ++KEM RGL + YT L+ L++ GK +A ++ M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS- 259
G PD + +I+ KAG + I + M+ LA V+ + A + D
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 260 --LLWQVHPQF-SPEFISDNDAVEFV--TTDIEGPLS-----IDQG----------LVLI 299
+L Q+ F +P+ I+ N ++ + + D+E + ++ G L+
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 300 LLKKKNL-VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
K N A SL +D + I++ +++ + A+ E
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y AL+ L K+ + +++ ++ G + V LI LG +R A K+F
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360
Query: 419 S-----LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
L D C YTALI G +A +YKTM G P + T + ++ GL
Sbjct: 361 KEMALRGLALDTVC---YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417
Query: 474 EKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
K GR+ A I+ KS++A L+ + V
Sbjct: 418 SKAGRIGAAVRIF----KSMEARGLAPNEV 443
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 202/515 (39%), Gaps = 72/515 (13%)
Query: 24 LKNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
L+ L + YT + ++L+T + + ++ S G D T +TM+D +A R
Sbjct: 84 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH--GCVPDVVTLSTMIDGLSKAGR 141
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
I + +F+ M+ +G+ + V Y++++H L A +D A+ + +MK C P ++Y
Sbjct: 142 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNV 201
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG---------------- 185
+ L + V+ A + EM++ G P+ YTY +L+ +AG
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTIN 261
Query: 186 --------------------KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
K EEA+ + K+ G P A N L+ CK G
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321
Query: 226 ILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
I +LR + +N + Y + L K + E L ++ +
Sbjct: 322 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR--------------- 366
Query: 283 TTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
L++D L+ LL+ + S+ + D +ST+I+
Sbjct: 367 ------GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R A+ F+ L Y ALI L K E++ +M KA +
Sbjct: 421 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 480
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMC 455
+LI L + V AA+ F + C TY LI + AG+ D A ++ M
Sbjct: 481 NILIDGLCKS-GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMS 539
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
++ T+ L++GL K +++ A +Y + K
Sbjct: 540 SSRCSANVVTYGALISGLCKRRQLTKASLYFQHMK 574
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 4/213 (1%)
Query: 24 LKNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
L+ L + YT + ++L+T + + ++ S G D T +TM+D +A R
Sbjct: 365 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH--GCVPDVVTLSTMIDGLSKAGR 422
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
I + +F+ M+ +G+ + V Y++++H L A +D A+ + +MK C P ++Y
Sbjct: 423 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 482
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ L + V+ A + EM++ G P+ YTY +L+ +AG + A +F M +
Sbjct: 483 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 542
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ LI CK + L ++MKE
Sbjct: 543 CSANVVTYGALISGLCKRRQLTKASLYFQHMKE 575
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY ++D ++ + + + F+ M E G D TY ++ AG+ D A ++
Sbjct: 476 DTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVF 535
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++M C +V+Y A + L ++ +A+ ++ M +RG
Sbjct: 536 DDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 1/218 (0%)
Query: 5 ISNVYKILKYSTW-DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
++ V IL W D L L ++Y VN++LK A+ FF W + GF
Sbjct: 5 VARVCGILNQHGWGDETVRALAGLNANLNAYQVNEILKQQKEAGVAYNFFIWARKQAGFK 64
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTT+L I G AK + + + M +G + VTY ++H A D+D ++ +
Sbjct: 65 HDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKL 124
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ M++ C P V+Y + + A D+Y++M G P+ +TY++++ L +
Sbjct: 125 FNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGK 184
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
AGK A ++F +M + G P NI+I+ KAG+
Sbjct: 185 AGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGK 222
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY T++D+ +A + ++ MQ G D TY+ ++H L AG ++ A
Sbjct: 132 GCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAA 191
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM + P++V+Y + + + A +Y ++ + G P+ TY ++ME
Sbjct: 192 YKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEV 251
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G E+A ++F +M+ AG D ++++ K G M ++ L
Sbjct: 252 LGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPN 311
Query: 241 YPVFKEALQTF 251
P L +
Sbjct: 312 VPACNSLLSAY 322
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
IL + K+ +++LL ++ + + + + +I D +L F +
Sbjct: 76 ILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEP 135
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R Y LI + K ++ +M AG + +++IH LG A + A K+F
Sbjct: 136 DRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLF 195
Query: 419 SLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ + + TY +I ++ AG D ALK+Y + G P T+ +++ L
Sbjct: 196 CEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNC 255
Query: 477 GRVSDAE 483
G + DAE
Sbjct: 256 GHIEDAE 262
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++GIL + +F + +++EM + G V LIH G A + K+F+++
Sbjct: 70 YTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVM- 128
Query: 423 EDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ C TY LI + AG D A+ +Y+ M G P T+++++ L K G++
Sbjct: 129 QMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKL 188
Query: 480 SDA 482
+ A
Sbjct: 189 NAA 191
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 56/152 (36%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ DR TY ++++ G I + VFE M+ G D + ++ G+ + A
Sbjct: 237 GYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKA 296
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ M P + + + + + A V M + GL P TYT L+
Sbjct: 297 AQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSS 356
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
E +F M G C++L
Sbjct: 357 CAACRAAWEYDALFGLMGGTGHPAHPFVCSLL 388
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 182/433 (42%), Gaps = 26/433 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVDGAVNIW 124
F+Y +L + R + ++M + G + D V+YT+V++ GD+D A +
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P +V+Y++ + L + +A +V M++ G+ PNC TY ++ +
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ +EA+ KM GV+PD N L++ CK G + M + L +
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
LQ + L ++H V I + L+ K+
Sbjct: 343 GTLLQGYATK----GALVEMHGLLDL----------MVRNGIHPNHYVFSILICAYAKQG 388
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + S + + + D+ T+I + C R + A+ FE + L+ Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL--- 421
+LI L + + K E++ EM G L +I R + + K+F L+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 422 ---PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P+ TY+ LI Y AG D+A K+ +M G+ P T+N L+ G K+ R
Sbjct: 509 GVKPD----IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 479 VSDAEIYRKEKKS 491
+ DA + +E +S
Sbjct: 565 MEDALVLFREMES 577
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/499 (20%), Positives = 203/499 (40%), Gaps = 59/499 (11%)
Query: 26 NLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
+ P SYT +N K ++KA+ ++ + RG + TY++++ +A+ +
Sbjct: 194 DCPPDVVSYTTVINGFFK-EGDLDKAYGTYHEM-LDRGILPNVVTYSSIIAALCKAQAMD 251
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
V M + G+ + TY S++H ++G A+ ++M P +V+Y + M
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPP---------------------------------- 169
L N R EA ++ M +RGL P
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 170 -NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
N Y +++L+ + GK ++A+ +FSKM++ G+ PD +I CK+G +
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE--FVTTDI 286
M + RL+ V+ + + + D+ W + E + ++ F + I
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDK-----WDKAKELILEMLDRGICLDTIFFNSII 486
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
+ K+ ++ + L ++ ++ D ST+I+ C + D A
Sbjct: 487 DSH-----------CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
V + + + Y LI K++ + EM +G S + +++ L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 407 SARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
RR A +++ + E Q +TY ++ D+AL++++ +C +
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 465 TFNVLLAGLEKLGRVSDAE 483
TFN+++ L K+GR +A+
Sbjct: 656 TFNIMIGALLKVGRNDEAK 674
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 151/331 (45%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + + ++ ++ + + ++ VF M+++G+N D VTY +V+ L +G V+ A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+M + P + Y + + L + D+ +A ++ EM+ RG+ + + +++
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDS 488
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ E+ ++F M GV+PD + LI+ C AG+ +L M +
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + K++ D+L+ E S + + +T +I I QG
Sbjct: 549 CVTYNTLINGYCKISRMEDALV------LFREMESSGVSPDIITYNI-----ILQG---- 593
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + + A L GI + QL+ + + I+ C + D AL F+ DL LE
Sbjct: 594 LFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 653
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ +IG L+K+ + ++ ++ G
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 7/211 (3%)
Query: 17 WDSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D A LL ++ +K D T N ++ + ME A + F + S G + D TY
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYN 588
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L + +R ++ K ++ + E G ++ TY ++H L D A+ +++ + L
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ ++ + L R EA D++ + GL P+ TY+++ E L+ G EE
Sbjct: 649 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 708
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++F M+E G + N ++ K + G+
Sbjct: 709 DDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 126/340 (37%), Gaps = 30/340 (8%)
Query: 155 ATDVYKEMIQRG---LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
A Y M + G + PN TY +L+ AG+ + + + G + D A
Sbjct: 72 AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131
Query: 212 LIEKCCKAGETRTII-LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
L++ C T + ++LR M + L VF + + DEN S Q P
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQ--LGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189
Query: 271 EFISDN--DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
+ D D V + TT I G K+ +L ++D+ I +
Sbjct: 190 DDGGDCPPDVVSY-TTVING-----------FFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
S+II C + D A+ VK + Y +++ + +++M
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAG 442
G V L+ L R A K+F L PE TY L+ Y + G
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE----ITTYGTLLQGYATKG 353
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + + M R GIHP+ F++L+ K G+V A
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 182/433 (42%), Gaps = 26/433 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVDGAVNIW 124
F+Y +L + R + ++M + G + D V+YT+V++ GD+D A +
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P +V+Y++ + L + +A +V M++ G+ PNC TY ++ +
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ +EA+ KM GV+PD N L++ CK G + M + L +
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
LQ + L ++H V I + L+ K+
Sbjct: 343 GTLLQGYAT----KGALVEMHGLLDL----------MVRNGIHPNHYVFSILICAYAKQG 388
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + S + + + D+ T+I + C R + A+ FE + L+ Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL--- 421
+LI L + + K E++ EM G L +I R + + K+F L+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 422 ---PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P+ TY+ LI Y AG D+A K+ +M G+ P T+N L+ G K+ R
Sbjct: 509 GVKPD----IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 479 VSDAEIYRKEKKS 491
+ DA + +E +S
Sbjct: 565 MEDALVLFREMES 577
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 187/463 (40%), Gaps = 55/463 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY++++ +A+ + V M + G+ + TY S++H ++G
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP---------- 169
A+ ++M P +V+Y + M L N R EA ++ M +RGL P
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347
Query: 170 -------------------------NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
N Y +++L+ + GK ++A+ +FSKM++ G+ P
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV 264
D +I CK+G + M + RL+ V+ + + + D+ W
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK-----WDK 462
Query: 265 HPQFSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ E + ++ F + I+ K+ ++ + L ++ ++
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSH-----------CKEGRVIESEKLFDLMVRIGVK 511
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D ST+I+ C + D A V + + + Y LI K++ +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFS 440
EM +G S + +++ L RR A +++ + E Q +TY ++
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
D+AL++++ +C + TFN+++ L K+GR +A+
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 151/331 (45%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + + ++ ++ + + ++ VF M+++G+N D VTY +V+ L +G V+ A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+M + P + Y + + L + D+ +A ++ EM+ RG+ + + +++
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDS 488
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ E+ ++F M GV+PD + LI+ C AG+ +L M +
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + K++ D+L+ E S + + +T +I I QG
Sbjct: 549 CVTYNTLINGYCKISRMEDALV------LFREMESSGVSPDIITYNI-----ILQG---- 593
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + + A L GI + QL+ + + I+ C + D AL F+ DL LE
Sbjct: 594 LFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 653
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ +IG L+K+ + ++ ++ G
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 177/429 (41%), Gaps = 30/429 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
S G D TY +++D + R + + +F+ M ++G+ + TY +++ + G +
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + M +P ++ + +V +A V+ +M Q+GL P+ TY +
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC---KAGETRTIILILRYMKE 234
+ L ++G+ E+A+ F +M + + P N LI C K + + +IL M +
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL---EMLD 472
Query: 235 NRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+ L F + + +V + V P+ I+ +T I+G
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT-------YSTLIDG-- 523
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
L K + LL+ ++ ++ D +T+I C R + AL+ F
Sbjct: 524 -------YCLAGKMDEAT--KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
++ + Y ++ L + E+ +T++G L + +++H L
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 411 PVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A ++F L + Q T T+ +IG G D+A ++ + G+ P + T+++
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 469 LLAGLEKLG 477
+ L + G
Sbjct: 695 MAENLIEQG 703
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A LL ++ +K D T N ++ + ME A + F + S G + D TY
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNI 589
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + +R ++ K ++ + E G ++ TY ++H L D A+ +++ + L +
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
++ + L R EA D++ + GL P+ TY+++ E L+ G EE
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++F M+E G + N ++ K + G+
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 126/340 (37%), Gaps = 30/340 (8%)
Query: 155 ATDVYKEMIQRG---LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
A Y M + G + PN TY +L+ AG+ + + + G + D A
Sbjct: 72 AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131
Query: 212 LIEKCCKAGETRTII-LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
L++ C T + ++LR M + L VF + + DEN S Q P
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQ--LGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189
Query: 271 EFISD--NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
+ D D V + TT I G K+ +L ++D+ I +
Sbjct: 190 DDGGDCPPDVVSY-TTVING-----------FFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
S+II C + D A+ VK + Y +++ + +++M
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAG 442
G V L+ L R A K+F L PE TY L+ Y + G
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE----ITTYGTLLQGYATKG 353
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + + M R GIHP+ F++L+ K G+V A
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 208/479 (43%), Gaps = 50/479 (10%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG----INIDA-- 101
+AW F+ + + +G D FTY T++D+ G+ ++ + + + M EKG I+ D+
Sbjct: 445 EAWQLFHDL-KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNA 503
Query: 102 -------------------------VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
+TY ++M + G VD AV + E MK EC PT+
Sbjct: 504 GHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTV 563
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
V+YT + L R+ EA + +EM ++G P+ TY+ LM + + EE+L +F +
Sbjct: 564 VTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDE 623
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
M G D + +++I CK+ + + + MKE + +K L + V DE
Sbjct: 624 MVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL-VKDE 682
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI 316
Q+ + + + V + +V L+K + L+ +
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNI-------------MVNGLVKSNRVDEACKLVDSM 729
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+++I D +++++ R + A F + + AY +L+ +L K
Sbjct: 730 KNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKL 789
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTA 433
I M K V + LI LG R V A F + CT Y++
Sbjct: 790 SHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR-VEEAYYFFENSISKGCTPNVGVYSS 848
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
LI + G D+AL++++ M R+ P++ T+N LL+GL K GR++ AE +E + +
Sbjct: 849 LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKV 907
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 200/450 (44%), Gaps = 29/450 (6%)
Query: 59 SRGFNH-DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
S GF TY T++ F + + E+M++ VTYT+++ L AG +
Sbjct: 520 SLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRL 579
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV++ EM+ + C P++V+Y++ M + D+ +E+ ++ EM+++G + TY+++
Sbjct: 580 DEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLV 639
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L ++ ++AL++F +M+E G++P L+ K + + I ++E+ L
Sbjct: 640 INCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSL 699
Query: 238 ---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSID 293
Y + L DE L+ + Q P+ + T+ ++G
Sbjct: 700 VPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT-------YTSLLDG----- 747
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L K L ++ + + ++ + D +++++V + AL+ F K
Sbjct: 748 ------LGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ Y +LI L K + E G + V + + LI G
Sbjct: 802 KRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDR 861
Query: 414 AAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A ++F + Q C TY L+ AG + A K+ + M + G P L T+N+L+
Sbjct: 862 ALELFEEMQRRQ-CPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILI 920
Query: 471 AGLEKLGRVSDAEIY--RKEKKSIQADALS 498
G+ K+G V +AE Y R ++K I D ++
Sbjct: 921 DGVGKMGMVDEAESYFKRMKEKGIVPDVIT 950
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 196/451 (43%), Gaps = 33/451 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++D G+A R+ + M+++G VTY+S+M + ++++++EM
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C + +Y+ + L +D V +A DV+ M + G+ P Y L+ LV+ K
Sbjct: 625 VRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKI 684
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVF 244
+ AL+IF+++QE+ + PD NI++ K+ ++ MK + Y
Sbjct: 685 DFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL 744
Query: 245 KEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ L +E ++ ++ + P+ ++ ++ + G LS + + KK
Sbjct: 745 LDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKG--GKLSHALIIFRAMAKK 802
Query: 304 K---NLVAIDSLLSGI----------------MDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ ++V SL+ + + K + V S++I+ D A
Sbjct: 803 RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRA 862
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
L FE + Y L+ L K +++EEM K G + +LI
Sbjct: 863 LELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDG 922
Query: 405 LGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADK---ALKIYKTMCRKGI 459
+G A F + E T+T+LI S G DK A +++ +M +G
Sbjct: 923 VGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIE---SLGKVDKLLEACELFDSMEEEGY 979
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
+PS+ T+NVL+ L + G+V +A + E K
Sbjct: 980 NPSVVTYNVLIDILGRAGKVHEAAMIFHEMK 1010
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+ FF S S+G + Y++++D FG+ + +FE MQ + + VTY
Sbjct: 824 VEEAYYFFEN-SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYN 882
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L+ AG ++ A + EEM+ C P +V+Y + + V EA +K M ++
Sbjct: 883 NLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEK 942
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ T+T L+E L + K EA E+F M+E G P N+LI+ +AG+
Sbjct: 943 GIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEA 1002
Query: 226 ILILRYMK 233
+I MK
Sbjct: 1003 AMIFHEMK 1010
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D +KN I D +T +L +E+A+ F ++ G D YT+++D+ G+
Sbjct: 727 DSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE-EGHEPDVVAYTSLMDVLGK 785
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
++S +F M +K D VTY+S++ L G V+ A +E K C P +
Sbjct: 786 GGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGV 845
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y++ + V A ++++EM +R PPN TY L+ L +AG+ A ++ +M+
Sbjct: 846 YSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEME 905
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
+ G PD NILI+ K G + MKE + F +++ D+
Sbjct: 906 KVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDK 963
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/553 (21%), Positives = 200/553 (36%), Gaps = 95/553 (17%)
Query: 5 ISNVYKILKYSTWDSAQD-LLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ + +++ WD+ L+ L K + V V+ + A FF W + G++
Sbjct: 120 LKKINGVIRRRKWDAEMGKQLERLKFKLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYS 179
Query: 64 HDRFTYTTM-----------------------------------LDIFGEAKRISSMKYV 88
H TYT M L FG +S +
Sbjct: 180 HTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEI 239
Query: 89 FELMQEKGINI-----------------------------------DAVTYTSVMHWLSN 113
F M+ G N DA T+ +H +
Sbjct: 240 FNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNR 299
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+G +D A +EM P + ++T + L + + EA + M PN T
Sbjct: 300 SGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVT 359
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
YT L+ L +AG+ EEA E+F +M+E PD A N LI+ KAGE + + MK
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK 419
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ L + + A WQ+ + + AV V T
Sbjct: 420 DRGLVPNLRTYNIMISVLGKAGRQPE-AWQLFHD-----LKEQGAVPDVFT--------Y 465
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR-DGALLAFEYSV 352
L+ +L K + + +++ +++K +IS + N H +GA EY
Sbjct: 466 NTLIDVLGKGGQMDKVLAIIKEMVEKG---GECIISR--DSNAGHEGTIEGADRTVEYPS 520
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+L Y L+ I + +++E M K V L+ LG A R
Sbjct: 521 LGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLD 580
Query: 413 PAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A + + E Q C TY++L+ ++ +++L ++ M RKG + T++++
Sbjct: 581 EAVSLLREM-EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLV 639
Query: 470 LAGLEKLGRVSDA 482
+ L K V A
Sbjct: 640 INCLCKSDDVDQA 652
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +L +A R++ + + E M++ G D VTY ++ + G VD A + ++ M
Sbjct: 880 TYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRM 939
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K P ++++T+ ++ L D++ EA +++ M + G P+ TY VL++ L RAGK
Sbjct: 940 KEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKV 999
Query: 188 EEALEIFSKMQEAGVQPDKAACNIL 212
EA IF +M+ G PD I+
Sbjct: 1000 HEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY ++D G+ + + F+ M+EKGI D +T+TS++ L + A ++
Sbjct: 912 DLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELF 971
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M+ + P++V+Y + IL +V EA ++ EM +G P+ T ++ L
Sbjct: 972 DSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVR 1031
Query: 185 GKYEEALE 192
+ ALE
Sbjct: 1032 EQQFHALE 1039
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D T+T++++ G+ ++ +F+ M+E+G N VTY ++ L AG V
Sbjct: 940 KEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKV 999
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
A I+ EMK+K C P ++ +IL + ++
Sbjct: 1000 HEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQ 1033
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 182/433 (42%), Gaps = 26/433 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVDGAVNIW 124
F+Y +L + R + ++M + G + D V+YT+V++ GD+D A +
Sbjct: 163 FSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P +V+Y++ + L + +A +V M++ G+ PNC TY ++ +
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ +EA+ KM GV+PD N L++ CK G + M + L +
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
LQ + L ++H V I + L+ K+
Sbjct: 343 GTLLQGYATK----GALVEMHGLLDL----------MVRNGIHPNHYVFSILICAYAKQG 388
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + S + + + D+ T+I + C R + A+ FE + L+ Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL--- 421
+LI L + + K E++ EM G L +I R + + K+F L+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 422 ---PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P+ TY+ LI Y AG D+A K+ +M G+ P T+N L+ G K+ R
Sbjct: 509 GVKPD----IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 479 VSDAEIYRKEKKS 491
+ DA + +E +S
Sbjct: 565 MEDALVLFREMES 577
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/499 (20%), Positives = 203/499 (40%), Gaps = 59/499 (11%)
Query: 26 NLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
+ P SYT +N K ++KA+ ++ + RG + TY++++ +A+ +
Sbjct: 194 DCPPDVVSYTTVINGFFK-EGDLDKAYGTYHEM-LDRGILPNVVTYSSIIAALCKAQAMD 251
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
V M + G+ + TY S++H ++G A+ ++M P +V+Y + M
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPP---------------------------------- 169
L N R EA ++ M +RGL P
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371
Query: 170 -NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
N Y +++L+ + GK ++A+ +FSKM++ G+ PD +I CK+G +
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE--FVTTDI 286
M + RL+ V+ + + + D+ W + E + ++ F + I
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDK-----WDKAKELILEMLDRGICLDTIFFNSII 486
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
+ K+ ++ + L ++ ++ D ST+I+ C + D A
Sbjct: 487 DSH-----------CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
V + + + Y LI K++ + EM +G S + +++ L
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 407 SARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
RR A +++ + E Q +TY ++ D+AL++++ +C +
Sbjct: 596 QTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 655
Query: 465 TFNVLLAGLEKLGRVSDAE 483
TFN+++ L K+GR +A+
Sbjct: 656 TFNIMIGALLKVGRNDEAK 674
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 151/331 (45%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + + ++ ++ + + ++ VF M+++G+N D VTY +V+ L +G V+ A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+M + P + Y + + L + D+ +A ++ EM+ RG+ + + +++
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDS 488
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ E+ ++F M GV+PD + LI+ C AG+ +L M +
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + K++ D+L+ E S + + +T +I I QG
Sbjct: 549 CVTYNTLINGYCKISRMEDALV------LFREMESSGVSPDIITYNI-----ILQG---- 593
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + + A L GI + QL+ + + I+ C + D AL F+ DL LE
Sbjct: 594 LFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 653
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ +IG L+K+ + ++ ++ G
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 7/211 (3%)
Query: 17 WDSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D A LL ++ +K D T N ++ + ME A + F + S G + D TY
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYN 588
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L + +R ++ K ++ + E G ++ TY ++H L D A+ +++ + L
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ ++ + L R EA D++ + GL P+ TY+++ E L+ G EE
Sbjct: 649 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 708
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++F M+E G + N ++ K + G+
Sbjct: 709 DDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 125/340 (36%), Gaps = 30/340 (8%)
Query: 155 ATDVYKEMIQRG---LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
A Y M + G + PN TY +LM AG+ + + + G D A
Sbjct: 72 AVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTP 131
Query: 212 LIEKCCKAGETRTII-LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
+++ C T + ++LR M + L VF + + D+N S Q P
Sbjct: 132 MLKGLCADKRTSDAMDIVLRRMTQ--LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMP 189
Query: 271 EFISDN--DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
+ D D V + TT I G K+ +L ++D+ I +
Sbjct: 190 DDGGDCPPDVVSY-TTVING-----------FFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
S+II C + D A+ VK + Y +++ + +++M
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAG 442
G V L+ L R A K+F L PE TY L+ Y + G
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE----ITTYGTLLQGYATKG 353
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + + M R GIHP+ F++L+ K G+V A
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 182/433 (42%), Gaps = 26/433 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVDGAVNIW 124
F+Y +L + R + ++M + G + D V+YT+V++ GD+D A +
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P +V+Y++ + L + +A +V M++ G+ PNC TY ++ +
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ +EA+ KM GV+PD N L++ CK G + M + L +
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
LQ + L ++H V I + L+ K+
Sbjct: 343 GTLLQGYATK----GALVEMHGLLDL----------MVRNGIHPNHYVFSILICAYAKQG 388
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + S + + + D+ T+I + C R + A+ FE + L+ Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL--- 421
+LI L + + K E++ EM G L +I R + + K+F L+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 422 ---PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P+ TY+ LI Y AG D+A K+ +M G+ P T+N L+ G K+ R
Sbjct: 509 GVKPD----IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564
Query: 479 VSDAEIYRKEKKS 491
+ DA + +E +S
Sbjct: 565 MEDALVLFREMES 577
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 187/463 (40%), Gaps = 55/463 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY++++ +A+ + V M + G+ + TY S++H ++G
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP---------- 169
A+ ++M P +V+Y + M L N R EA ++ M +RGL P
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347
Query: 170 -------------------------NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
N Y +++L+ + GK ++A+ +FSKM++ G+ P
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV 264
D +I CK+G + M + RL+ V+ + + + D+ W
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK-----WDK 462
Query: 265 HPQFSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ E + ++ F + I+ K+ ++ + L ++ ++
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSH-----------CKEGRVIESEKLFDLMVRIGVK 511
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D ST+I+ C + D A V + + + Y LI K++ +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFS 440
EM +G S + +++ L RR A +++ + E Q +TY ++
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
D+AL++++ +C + TFN+++ L K+GR +A+
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 151/331 (45%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + + ++ ++ + + ++ VF M+++G+N D VTY +V+ L +G V+ A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+M + P + Y + + L + D+ +A ++ EM+ RG+ + + +++
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDS 488
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ E+ ++F M GV+PD + LI+ C AG+ +L M +
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + K++ D+L+ E S + + +T +I I QG
Sbjct: 549 CVTYNTLINGYCKISRMEDALV------LFREMESSGVSPDIITYNI-----ILQG---- 593
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + + A L GI + QL+ + + I+ C + D AL F+ DL LE
Sbjct: 594 LFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 653
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ +IG L+K+ + ++ ++ G
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 177/428 (41%), Gaps = 30/428 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY +++D + R + + +F+ M ++G+ + TY +++ + G +
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + M +P ++ + +V +A V+ +M Q+GL P+ TY ++
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC---KAGETRTIILILRYMKEN 235
L ++G+ E+A+ F +M + + P N LI C K + + +IL M +
Sbjct: 417 GILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL---EMLDR 473
Query: 236 RLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+ L F + + +V + V P+ I+ +T I+G
Sbjct: 474 GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT-------YSTLIDG--- 523
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
L K + LL+ ++ ++ D +T+I C R + AL+ F
Sbjct: 524 ------YCLAGKMDEAT--KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
++ + Y ++ L + E+ +T++G L + +++H L
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 412 VPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A ++F L + Q T T+ +IG G D+A ++ + G+ P + T++++
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 470 LAGLEKLG 477
L + G
Sbjct: 696 AENLIEQG 703
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A LL ++ +K D T N ++ + ME A + F + S G + D TY
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYNI 589
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + +R ++ K ++ + E G ++ TY ++H L D A+ +++ + L +
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
++ + L R EA D++ + GL P+ TY+++ E L+ G EE
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++F M+E G + N ++ K + G+
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 126/340 (37%), Gaps = 30/340 (8%)
Query: 155 ATDVYKEMIQRG---LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
A Y M + G + PN TY +L+ AG+ + + + G + D A
Sbjct: 72 AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131
Query: 212 LIEKCCKAGETRTII-LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
L++ C T + ++LR M + L VF + + DEN S Q P
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQ--LGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189
Query: 271 EFISD--NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
+ D D V + TT I G K+ +L ++D+ I +
Sbjct: 190 DDGGDCPPDVVSY-TTVING-----------FFKEGDLDKAYGTYHEMLDRGILPNVVTY 237
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
S+II C + D A+ VK + Y +++ + +++M
Sbjct: 238 SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHS 297
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAG 442
G V L+ L R A K+F L PE TY L+ Y + G
Sbjct: 298 DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE----ITTYGTLLQGYATKG 353
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + + M R GIHP+ F++L+ K G+V A
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 5 ISNVYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ V ILK W A + L NL D+Y NQ+LK A FF W+ R GF
Sbjct: 324 VEGVKDILKQLRWGPATEKALYNLNFSIDAYQANQILKQLQDHSVALSFFYWLKRQPGFW 383
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTTM+ I G A+ ++ + E M + G + VTY ++H A + A+N+
Sbjct: 384 HDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNV 443
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ +M+ C P V+Y + I + A +Y+ M + GL P+ +TY+V++ L +
Sbjct: 444 FNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGK 503
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+G A +F +M + G P+ NILI KA +T + + R M+
Sbjct: 504 SGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQN 554
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY T++DI +A + ++E MQE G++ D TY+ +++ L +G++ A
Sbjct: 451 GCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAA 510
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM + C P IV+Y + + + A +Y++M G P+ TY+++ME
Sbjct: 511 HRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEV 570
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L G EEA +F +M++ PD+ +LI+ KAG
Sbjct: 571 LGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGN 611
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY+ M++ G++ +S+ +F M ++G + VTY ++ + A + A
Sbjct: 486 GLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTA 545
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +M+ P V+Y+ M++L ++EA V+ EM Q P+ Y +L++
Sbjct: 546 LKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDL 605
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+AG E+A E + M AG+ P+ CN L+
Sbjct: 606 WGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLS 639
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ + +A+ + ++ MQ G D VTY+ VM L G ++ A ++ EM
Sbjct: 528 TYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEM 587
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P Y + + V++A + Y M++ GL PN T L+ +R +
Sbjct: 588 KQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRL 647
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+A + M G+ P +L+ C +A
Sbjct: 648 PDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEA 679
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++GIL + F + +++E+M K G V LIH G A A +F+ +
Sbjct: 389 YTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQM- 447
Query: 423 EDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
++ C TY LI ++ AG D A+ +Y+ M G+ P T++V++ L K G +
Sbjct: 448 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNL 507
Query: 480 SDAE 483
S A
Sbjct: 508 SAAH 511
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 4/191 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V IL + + AI+ LL ++ Q + + +I AL F +M
Sbjct: 392 MVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMG 451
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K + E M + G S + +++I+ LG + A
Sbjct: 452 CEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAH 511
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++F + DQ C TY LI + A + ALK+Y+ M G P T+++++
Sbjct: 512 RLFCEM-VDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEV 570
Query: 473 LEKLGRVSDAE 483
L G + +AE
Sbjct: 571 LGYCGYLEEAE 581
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 58/127 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ GF D+ TY+ ++++ G + + VF M++ D Y ++ AG+V
Sbjct: 553 QNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNV 612
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + M P + + + + R+ +A ++ + M+ GL P+ TYT+L
Sbjct: 613 EKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLL 672
Query: 178 MEYLVRA 184
+ A
Sbjct: 673 LSCCTEA 679
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 141/398 (35%), Gaps = 59/398 (14%)
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNI-----WEEMKLKECYP---TIVSYTAYMKIL 146
+ +N+ A + H+ ++ V+G +I W K Y +I +Y A +
Sbjct: 302 RDLNMPAGIAPTRRHFTNSGHVVEGVKDILKQLRWGPATEKALYNLNFSIDAYQANQILK 361
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
L D + Y Q G + +TYT ++ L RA ++ ++ +M + G QP+
Sbjct: 362 QLQDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNV 421
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
N LI Y + N L EAL F E
Sbjct: 422 VTYNRLIHS---------------YGRANYLG-------EALNVFNQMQE---------- 449
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ D V + T L+ I K L S+ + + + D+
Sbjct: 450 -----MGCEPDRVTYCT------------LIDIHAKAGFLDVAMSMYERMQEVGLSPDTF 492
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
S +I A F V Y LI + K + ++ +M
Sbjct: 493 TYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDM 552
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSA 444
AG ++++ LG A +F + ++ Y LI ++ AG+
Sbjct: 553 QNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNV 612
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+KA + Y M R G+ P++ T N LL+ ++ R+ DA
Sbjct: 613 EKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDA 650
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 209/494 (42%), Gaps = 35/494 (7%)
Query: 3 DTISNVYKILKYSTWDSAQD-LLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
DT++ + K ++ W+ QD L ++ + V +VL + A FF W + G
Sbjct: 152 DTVNKICKAIEEDQWECLQDNFLNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEG 211
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
++H+ Y TM+DI G AK + ++ + + MQ +G I S + +G ++
Sbjct: 212 YDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESL 271
Query: 122 NIWEEMKLKECYPTIV--SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ MK P ++ +Y + + L N ++ A +++ +MI G+ N TYT +++
Sbjct: 272 EAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQ 331
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
K E+A+++ M + PD I+I CK +L+ M+EN
Sbjct: 332 CFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEP 391
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG--PLSIDQGLV 297
+ +Q PE +A+E VT +G P +I +
Sbjct: 392 NIYTYNALIQGLCAVRR-------------PE-----EALELVTLMEQGGVPPNIYTYTI 433
Query: 298 LI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L L K + L + + + + ++ + +T++ C R A+ + + D
Sbjct: 434 LTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQND 493
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG---VYLGALLIHRLGSARRPV 412
+ Y LI L++ N P + +EM G+ + + + A + R+G+ +
Sbjct: 494 CTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHK--- 550
Query: 413 PAAKIFSLLPEDQK---CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A IF +D+ + Y I +AG ++A + M KG P+L T+N +
Sbjct: 551 -DASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTM 609
Query: 470 LAGLEKLGRVSDAE 483
+ G + GR+ DA+
Sbjct: 610 IKGFCRQGRLDDAD 623
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 17/263 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + +TY ++ +R + LM++ G+ + TYT + H L +
Sbjct: 385 RENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRL 444
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++ E + P V+Y + R+ EA D+ KEM Q P+ TYT L
Sbjct: 445 DRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTL 504
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ LV+ + +AL + +M+ G + NIL + G + + R MK+
Sbjct: 505 IQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGF 564
Query: 238 ALRYPVFKEALQTFKVA---DENDSLLWQ-VHPQFSPEFISDN-------------DAVE 280
A + A+ A +E +LL++ ++ +SP + N DA
Sbjct: 565 AYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADA 624
Query: 281 FVTTDIEGPLSIDQGLVLILLKK 303
+ IE + D G IL+K+
Sbjct: 625 MLNFMIENGIGPDTGSYNILIKE 647
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TYTT++ + ++ + + M+ KG +++ T + L+ G+ A +
Sbjct: 497 DHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFY 556
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
MK + + Y + L ++EA + EMI +G PN TY +++ R
Sbjct: 557 RRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQ 616
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G+ ++A + + M E G+ PD + NILI++ G T+
Sbjct: 617 GRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQ 655
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 129/322 (40%), Gaps = 21/322 (6%)
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD--KAACNILIEKCCKAGETRTIILILRY 231
++ +M Y R+G+++E+LE F+ M+E G +P A N ++ K + +
Sbjct: 255 HSFVMSY-GRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQ 313
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
M N ++ + +Q F + ++ + + + + I +N A + VT I
Sbjct: 314 MINNGVSCNNLTYTSMIQCFFLKEKMEDAM-----KLLDDMIQNNYAPDVVTYTI----- 363
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
++ L K+K + +L + + + + + +I+ C RR + AL
Sbjct: 364 ----VISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLM 419
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
+ + Y L L KL + E+ E G L++ R
Sbjct: 420 EQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRL 479
Query: 412 VPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
+ A I + ++ CT TYT LI AL+++ M KG + T N+
Sbjct: 480 IEAMDILKEMHQND-CTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNI 538
Query: 469 LLAGLEKLGRVSDAEIYRKEKK 490
L GL ++G DA I+ + K
Sbjct: 539 LARGLARVGNHKDASIFYRRMK 560
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 180/429 (41%), Gaps = 18/429 (4%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVDGAVNIW 124
F+Y +L + R + ++M + G + D V+YT+V++ GD+D A +
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P +V+Y + + L + +A +V M++ G+ PNC TY ++ +
Sbjct: 223 HEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ +EA+ KM GV+PD N L++ CK G + M + L +
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
LQ + L ++H V I + L+ K+
Sbjct: 343 GTLLQGYATK----GALVEMHGLLDL----------MVRNGIHPNHYVFSILICAYAKQG 388
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + S + + + D+ T+I + C R + A+ FE + L+ Y
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE- 423
+LI L + + K E++ EM G L +I R + + K+F L+
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508
Query: 424 -DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ TY+ LI Y AG D+A K+ +M G+ P T+N L+ G K+ R+ DA
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568
Query: 483 EIYRKEKKS 491
+ +E +S
Sbjct: 569 LVLFREMES 577
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/463 (19%), Positives = 186/463 (40%), Gaps = 55/463 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY +++ +A+ + V M + G+ + TY S++H ++G
Sbjct: 228 RGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP---------- 169
A+ ++M P +V+Y + M L N R EA ++ M +RGL P
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347
Query: 170 -------------------------NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
N Y +++L+ + GK ++A+ +FSKM++ G+ P
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV 264
D +I CK+G + M + RL+ V+ + + + D+ W
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK-----WDK 462
Query: 265 HPQFSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ E + ++ F + I+ K+ ++ + L ++ ++
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSH-----------CKEGRVIESEKLFDLMVRIGVK 511
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+ ST+I+ C + D A V + + + Y LI K++ +
Sbjct: 512 PNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFS 440
EM +G S + +++ L RR A +++ + E Q +TY ++
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
D+AL++++ +C + TFN+++ L K+GR +A+
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 151/331 (45%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + + ++ ++ + + ++ VF M+++G+N D VTY +V+ L +G V+ A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+M + P + Y + + L + D+ +A ++ EM+ RG+ + + +++
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDS 488
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ E+ ++F M GV+P+ + LI+ C AG+ +L M +
Sbjct: 489 HCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 548
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + K++ D+L+ E S + + +T +I I QG
Sbjct: 549 CVTYNTLINGYCKISRMEDALV------LFREMESSGVSPDIITYNI-----ILQG---- 593
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + + A L GI + QL+ + + I+ C + D AL F+ DL LE
Sbjct: 594 LFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 653
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ +IG L+K+ + ++ ++ G
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 176/429 (41%), Gaps = 30/429 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
S G D TY +++D + R + + +F+ M ++G+ + TY +++ + G +
Sbjct: 296 HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + M +P ++ + +V +A V+ +M Q+GL P+ TY +
Sbjct: 356 VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC---KAGETRTIILILRYMKE 234
+ L ++G+ E+A+ F +M + + P N LI C K + + +IL M +
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELIL---EMLD 472
Query: 235 NRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+ L F + + +V + V P I+ +T I+G
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIIT-------YSTLIDG-- 523
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
L K + LL+ ++ ++ D +T+I C R + AL+ F
Sbjct: 524 -------YCLAGKMDEAT--KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
++ + Y ++ L + E+ +T++G L + +++H L
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634
Query: 411 PVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A ++F L + Q T T+ +IG G D+A ++ + G+ P + T+++
Sbjct: 635 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Query: 469 LLAGLEKLG 477
+ L + G
Sbjct: 695 MAENLIEQG 703
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 7/211 (3%)
Query: 17 WDSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D A LL ++ +K D T N ++ + ME A + F + S G + D TY
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM-ESSGVSPDIITYN 588
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L + +R ++ K ++ + E G ++ TY ++H L D A+ +++ + L
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ ++ + L R EA D++ + GL P+ TY+++ E L+ G EE
Sbjct: 649 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 708
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++F M+E G + N ++ K + G+
Sbjct: 709 DDLFLSMEENGCTANSRMLNSIVRKLLQRGD 739
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 143/362 (39%), Gaps = 33/362 (9%)
Query: 155 ATDVYKEMIQRG---LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
A Y M + G + PN TY +L+ AG+ + + + G + D A
Sbjct: 72 AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131
Query: 212 LIEKCCKAGETRTII-LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
L++ C T + ++LR M + L VF + + DEN S Q P
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQ--LGCIPNVFSYNILLKGLCDENRSQEALELLQMMP 189
Query: 271 EFISDN--DAVEFVTTD----IEGPLSIDQGLVLILLKKK---NLVAIDSLLSGI----- 316
+ D D V + T EG L G +L + N+V +S+++ +
Sbjct: 190 DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQA 249
Query: 317 MDKSIQLDSAVISTIIEVNCD----------HRRRDGALLAFEYSVKMD-LNLERTAYLA 365
MDK++++ ++++ + NC + + F + D + + Y +
Sbjct: 250 MDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNS 309
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
L+ L K + ++ + MTK G + L+ + V + L+ +
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 425 -QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++ LI Y G D+A+ ++ M ++G++P T+ ++ L K GRV DA
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 484 IY 485
Y
Sbjct: 430 RY 431
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 228/526 (43%), Gaps = 37/526 (7%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L +K D V++VLK + FF W + R F HD +
Sbjct: 70 RILKIFKWGPDAEKALEVLKLKVDHRLVHEVLKIDVEINVKIQFFKWAGKRRNFEHDSSS 129
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+ ++ EA M K + ++++ I +V + ++ L A V+ A++++ ++
Sbjct: 130 FMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQI 189
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K ++C P +Y + + +L +++ ++Y EM G P+ TY+ L+ + G
Sbjct: 190 KGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGH 249
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
Y+ A+ +F +M+E G+ P L+ K + + +++ MK+ L + E
Sbjct: 250 YDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTE 309
Query: 247 ALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
++ +V D L + P+ + N + + G L + L +
Sbjct: 310 WIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGK--VGRLEVTLKLFRKMES 367
Query: 303 ---KKNLVAIDSLLSGIMD-----------------KSIQLDSAVISTIIEVNCDHRRRD 342
K N+V ++++ + + I S S +I+ C R +
Sbjct: 368 WQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIE 427
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK-AGHSLG-VYLGAL 400
ALL E + AY +LI L K+ + E+ E+ + GHS VY A+
Sbjct: 428 KALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVY--AV 485
Query: 401 LIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+I G R A +F+ + + + Y AL+ AG D+A + +TM G
Sbjct: 486 MIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENG 545
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
P L + N++L GL + G A E++ K K S I+ DA+S + V
Sbjct: 546 CSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTV 591
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA L + +GF Y ++++ G+ KR + +F ++E + A Y
Sbjct: 426 IEKALLLLEEMDE-KGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYA 484
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ G + AV+++ EM+ P + +Y A M + + EA + + M +
Sbjct: 485 VMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDEN 544
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ ++ +++ L R G + A+E+F+KM+ + ++PD + N ++ AG
Sbjct: 545 GCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEA 604
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADEN 257
++R M + L+ DE+
Sbjct: 605 AKLMREMNLKGFEYNNITYTSILEAVGKVDED 636
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y M+ FG+ R+S +F M++ G D Y ++M + AG +D A ++ M
Sbjct: 483 YAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMD 542
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P + S+ + L A +++ +M + P+ +Y ++ L AG +E
Sbjct: 543 ENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFE 602
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
EA ++ +M G + + ++E K E R
Sbjct: 603 EAAKLMREMNLKGFEYNNITYTSILEAVGKVDEDRA 638
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 4 TISNVYKILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
++ Y L+ W + +L NL K D++ NQVLK A FF W+ R GF
Sbjct: 297 SVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLLHDHTVALGFFQWLKRQPGF 356
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
HD TYTTM+ I G+A++ +K + + M VTY ++H A + AV
Sbjct: 357 KHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVK 416
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++EEM+ P V+Y + I + A D+Y M + GL P+ +TY+V++ L
Sbjct: 417 VFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLG 476
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---AL 239
+ G+ A ++F +M E G P+ NI+I KA ++ + + M+ +
Sbjct: 477 KGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKI 536
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
Y + E L DE +++ ++ ++P+
Sbjct: 537 TYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPD 568
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY+ M++ G+ ++++ +F M E G + VTY ++ + A + +
Sbjct: 460 GLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENV 519
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++++M++ P ++Y+ M++L + EA V+ EM +R P+ Y +L++
Sbjct: 520 VKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDWAPDEPVYGLLVDL 578
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+AG ++AL + M + G+QP+ CN L+ K + ++L+ M
Sbjct: 579 WGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNM 630
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ + +A+ ++ +++ MQ G D +TY+ VM L + G +D A ++ EM
Sbjct: 502 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 561
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ ++ P Y + + V +A Y+ M+Q GL PN T L+ ++ ++
Sbjct: 562 R-RDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRF 620
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
++A + M G+ P +L+ CC G+ +
Sbjct: 621 QDAYIVLQNMLARGLVPSVQTYTLLLS-CCTVGQAQ 655
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +IGIL + F + E+++EM++A V +IH G A A K+F +
Sbjct: 363 YTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQ 422
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
E + TY LI ++ AG D A+ +Y M G+ P T++V++ L K G+++
Sbjct: 423 EAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGKGGQLA 482
Query: 481 DA 482
A
Sbjct: 483 AA 484
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D+ TY+ ++++ G + + VF M+ + D Y ++ AG+VD A
Sbjct: 530 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYGLLVDLWGKAGNVDKA 588
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ ++ M P + + + + +R ++A V + M+ RGL P+ TYT+L+
Sbjct: 589 LGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLARGLVPSVQTYTLLL 646
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 129/330 (39%), Gaps = 66/330 (20%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q G + +TYT ++ L +A ++ E+ +M A +P N +I
Sbjct: 353 QPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHA-------- 404
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
Y + N L KEA++ F+ E + P D V + T
Sbjct: 405 -------YGRANYL-------KEAVKVFEEMQEAG---------YEP------DRVTYCT 435
Query: 284 TDIEGPLSIDQGLVLILLKKKNL-VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
L+ I K L +A+D L G M + + L + + VNC +
Sbjct: 436 ------------LIDIHAKAGYLDIAMD--LYGRM-QEVGLSPDTFTYSVMVNCLGK--- 477
Query: 343 GALLAFEYSVKMDL-------NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
G LA Y + ++ NL Y +I + K + V ++ ++M AG
Sbjct: 478 GGQLAAAYKLFCEMIENGCTPNL--VTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDK 535
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPED-QKCTATYTALIGVYFSAGSADKALKIYKTM 454
++++ LG A +F + D Y L+ ++ AG+ DKAL Y+ M
Sbjct: 536 ITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAM 595
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ G+ P++ T N LL+ K+ R DA I
Sbjct: 596 LQDGLQPNVPTCNSLLSAFLKMNRFQDAYI 625
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/522 (22%), Positives = 218/522 (41%), Gaps = 30/522 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L +K D V +VLK + FF W + R F HD T
Sbjct: 67 RILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTT 126
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ EA + M + M I + ++ L A V+ A++I+ ++K
Sbjct: 127 YMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIK 186
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKY 187
++C PT +Y + + +L ++ ++Y EM G P+ TY+ L+ + G+
Sbjct: 187 GRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRD 246
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ A+ +F +M+E G+ P ++ K G + +++ MKE AL + E
Sbjct: 247 DSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTEL 306
Query: 248 LQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT------------DIEG--- 288
++ KV + + + P+ + N+ + + ++E
Sbjct: 307 IKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQC 366
Query: 289 -PLSIDQGLVLILLKKKNLVAIDSLL--SGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
P + V+ L + A ++ L + + + S S +I+ C R + AL
Sbjct: 367 TPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKAL 426
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
L E + AY +LI L K + E+ +E+ + + A++I L
Sbjct: 427 LLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHL 486
Query: 406 GSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
G R A +F+ + + C Y AL+ G D+A + +TM G P
Sbjct: 487 GKCGRLSEAVDLFNEM-KKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPD 545
Query: 463 LGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
L + N++L G + G A E++ + K S I+ D +S + V
Sbjct: 546 LNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTV 587
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA L + +GF Y ++++ G+AKR + +F+ ++E A Y
Sbjct: 422 VEKALLLLEEMDE-KGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYA 480
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G + AV+++ EMK C P + +Y A M + EA + + M +
Sbjct: 481 VMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEEN 540
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G P+ ++ +++ R G + A+E+F++M+ + ++PD + N ++ +AG
Sbjct: 541 GCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAG 595
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E A F + + G++ R Y M+ G+ R+S +F M++ G N D Y +
Sbjct: 458 EAANELFQELRENCGYSSAR-VYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNA 516
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M + G D A ++ M+ C P + S+ + K A +++ M
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+ P+ +Y ++ L RAG +EEA ++ +M G + D + ++E K E T
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDHT 634
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 199/459 (43%), Gaps = 33/459 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D + +TT ++ F + ++ +F M+E G+ + VT+ +V+ L G D
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A E+M + PT+++Y+ +K L R+ +A V KEM ++G PPN Y L++
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ AG +A+EI M G+ + N LI+ CK G+ +L+ M L++
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM----LSI 429
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN--DAVEFVTTDIEGPLSIDQG-- 295
+ V + + + + L++ +F E + N +TT I G +
Sbjct: 430 GFNVNQGSFTSV-ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 296 ---LVLILLKKKNLV---AIDSLLSG----------------IMDKSIQLDSAVISTIIE 333
L L K +V ++LL G I+ + +D +T+I
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C ++ D A + + VK L + Y LI L +N + + ++ + G
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
VY +++I A R + F + Q T Y LI Y +G AL++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
+ M KGI P+ T+ L+ G+ + RV +A++ +E +
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 29 IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+K D+YT + + L +E+A F++ R+ G D +TY+ M+D +A+R
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ F+ M K + + V Y ++ +G + A+ + E+MK K P +YT+ +K
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ + RV+EA +++EM GL PN + YT L++ + G+ + + +M V P+
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE----------ALQTFKVAD 255
K ++I + G +L M+E + +KE L+ FK +D
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 809
Query: 256 END 258
E +
Sbjct: 810 EEN 812
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 166/384 (43%), Gaps = 27/384 (7%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ + K +P+ + + L + ++ + + +++ +G+ P+ Y +T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
+ GK EEA+++FSKM+EAGV P+ N +I+ G + M E +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 239 --LRYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y + + L K + D L F P I N+ ++ I+ G
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF---------IEAG 379
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ ++ K+L ++ K + L S+ +T+I+ C + + D A + + +
Sbjct: 380 SLNKAIEIKDL---------MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
N+ + ++ ++I +L F V EM S G L LI L + A
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 416 KI-FSLLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++ F L + T T AL+ AG D+A +I K + +G ++N L++G
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 474 EKLGRVSDAEIYRKE--KKSIQAD 495
++ +A ++ E K+ ++ D
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPD 574
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 3/182 (1%)
Query: 40 LKTHPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
L H KA L+F ++++ GF D T +L EA ++ + + + +G
Sbjct: 480 LCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
+D V+Y +++ +D A +EM + P +Y+ + LF ++V+EA
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + + G+ P+ YTY+V+++ +A + EE E F +M VQP+ N LI C+
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 219 AG 220
+G
Sbjct: 658 SG 659
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 171/442 (38%), Gaps = 48/442 (10%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY T++ + + + + + + + M G N++ ++TSV+ L + D
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ EM L+ P T + L + + +A +++ + + +G + T L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L AGK +EA I ++ G D+ + N LI CC + + L M + L
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 239 ---LRYPVF----------KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
Y + +EA+Q + N L P + + + T+
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-----PDVYTYSVMIDGCCKAERTE 627
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
EG D+ +M K++Q ++ V + +I C R AL
Sbjct: 628 -EGQEFFDE---------------------MMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
E ++ Y +LI + ++ + + EEM G V+ LI
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 406 GSARRPVPAAKIFSLLPEDQKCTA-----TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
G + V K+ LL E TYT +IG Y G+ +A ++ M KGI
Sbjct: 726 GKLGQMV---KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P T+ + G K G V +A
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEA 804
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/469 (20%), Positives = 179/469 (38%), Gaps = 35/469 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TY+ ++ AKRI +V + M +KG + + Y +++ AG ++
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I + M K T +Y +K N + A + KEM+ G N ++T ++
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYMKENRLA 238
L ++ AL +M + P LI CK G+ ++ + L +++ +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG-FV 502
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ L A + D + D + + + G +D+ +
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 299 ILLKKKNLVAIDS-----LLSGI-----MDKSIQL-----------DSAVISTIIEVNCD 337
+ K + D+ L+ G+ ++++IQ D S +I+ C
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS----- 392
R + F+ + ++ Y LI + E+ E+M G S
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 393 -LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
+ G +I R+ A+ ++ L P YTALI Y G K +
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN----VFHYTALIDGYGKLGQMVKVECLL 738
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
+ M K +HP+ T+ V++ G + G V++A E +K I D+++
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A++F + + + RG D +TY+ ++ ++ ++ + G+ D TY+
Sbjct: 556 LDEAFMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ A + ++EM K P V Y ++ + R+ A ++ ++M +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN TYT L++ + + EEA +F +M+ G++P+ LI+ K G+ +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 226 ILILRYM 232
+LR M
Sbjct: 735 ECLLREM 741
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/522 (22%), Positives = 218/522 (41%), Gaps = 30/522 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L +K D V +VLK + FF W + R F HD T
Sbjct: 67 RILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTT 126
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ EA + M + M I + ++ L A V+ A++I+ ++K
Sbjct: 127 YMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIK 186
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKY 187
++C PT +Y + + +L ++ ++Y EM G P+ TY+ L+ + G+
Sbjct: 187 GRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRD 246
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ A+ +F +M+E G+ P ++ K G + +++ MKE AL + E
Sbjct: 247 DSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTEL 306
Query: 248 LQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT------------DIEG--- 288
++ KV + + + P+ + N+ + + ++E
Sbjct: 307 IKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQC 366
Query: 289 -PLSIDQGLVLILLKKKNLVAIDSLL--SGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
P + V+ L + A ++ L + + + S S +I+ C R + AL
Sbjct: 367 TPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKAL 426
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
L E + AY +LI L K + E+ +E+ + + A++I L
Sbjct: 427 LLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHL 486
Query: 406 GSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
G R A +F+ + + C Y AL+ G D+A + +TM G P
Sbjct: 487 GKCGRLSEAVDLFNEM-KKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPD 545
Query: 463 LGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
L + N++L G + G A E++ + K S I+ D +S + V
Sbjct: 546 LNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTV 587
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA L + +GF Y ++++ G+AKR + +F+ ++E A Y
Sbjct: 422 VEKALLLLEEMD-EKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYA 480
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G + AV+++ EMK C P + +Y A M + EA + + M +
Sbjct: 481 VMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEEN 540
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G P+ ++ +++ R G + A+E+F++M+ + ++PD + N ++ +AG
Sbjct: 541 GCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAG 595
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E A F + + G++ R Y M+ G+ R+S +F M++ G N D Y +
Sbjct: 458 EAANELFQELRENCGYSSAR-VYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNA 516
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M + G D A ++ M+ C P + S+ + K A +++ M
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+ P+ +Y ++ L RAG +EEA ++ +M G + D + ++E K E T
Sbjct: 577 IKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDHT 634
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 185/447 (41%), Gaps = 53/447 (11%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
TVN ++ + M + ++ + + GF D+ TY T + + +S V +LM
Sbjct: 269 TVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLM 328
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
++G + D TY +V++ LS G++D A I +M + C P ++ + L +R+
Sbjct: 329 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA D+ +E+ +GL P+ YT+ +L+ L + G + +F +M+ +G PD+ NIL
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNIL 448
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
I+ C G+ + +L M+ N + + D+L ++ + + E
Sbjct: 449 IDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTII---------DALCKKMRIEEAEEV 499
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
DA QG+ ++ V ++L+ G+
Sbjct: 500 FDQMDA---------------QGI------SRSAVTFNTLIDGL---------------- 522
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C +R D A E VK L Y +++ K K A+I+E MT G
Sbjct: 523 ---CKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+ V LI+ L A R A K+ + + Y +I F + AL +
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNL 639
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLG 477
++ M G P T+ ++ L + G
Sbjct: 640 FREMTEVGEPPDALTYKIVFRSLCRGG 666
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G TY T++D + RI + VF+ M +GI+ AVT+ +++ L A +D
Sbjct: 470 SNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRID 529
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + E+M + P ++Y + + +K+A D+ + M G + TY L+
Sbjct: 530 DATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLI 589
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK---EN 235
L +AG+ + AL++ M+ G++P A N +I+ + R + + R M E
Sbjct: 590 NGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEP 649
Query: 236 RLALRYPVFKEAL--QTFKVADENDSLLWQVHPQFSPEFIS 274
AL Y + +L + + D L+ V+ F PEF S
Sbjct: 650 PDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSS 690
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 9/223 (4%)
Query: 18 DSAQDLLKNLPIKW---DSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
+ A DL + L +K D YT +N + K P LF +S G D TY
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM--KSSGCTPDEVTYN 446
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
++D ++ + + M+ G VTY +++ L ++ A ++++M +
Sbjct: 447 ILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQ 506
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ V++ + L R+ +AT++ ++M++ GL PN TY ++ + + G ++A
Sbjct: 507 GISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKA 566
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+I M G + D LI CKAG T+ + +LR M+
Sbjct: 567 ADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 609
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/503 (20%), Positives = 178/503 (35%), Gaps = 78/503 (15%)
Query: 17 WDSAQDLLKN------LPIKWDSYTVNQVLKTHPPMEKAWLF---FNWVSRSRGFNHDRF 67
+D A DL+ N ++ D+ N +L K L +N ++ RG D
Sbjct: 140 FDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMT-GRGIQPDVV 198
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T T++ A ++ + + E M G+ D T+T++M G ++ A+ + +M
Sbjct: 199 TLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKM 258
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C PT V+ + RV++A ++ I G P+ TY + L + G
Sbjct: 259 MEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHV 318
Query: 188 EEALEIFSKMQEAGVQPD--------------------KAACNILIEKCCKAGETRTIIL 227
AL++ M + G PD K N ++++ C T L
Sbjct: 319 SHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTL 378
Query: 228 ILRYMKENRLALRYPVFKEA--------LQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
I+ +NRL + +E + TF + ++L P + +
Sbjct: 379 IVALSSQNRLEEALDLARELTVKGLSPDVYTFNILI--NALCKVGDPHLGIRLFEEMKSS 436
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
++ + ID L L LL+ + + +TII+ C
Sbjct: 437 GCTPDEVTYNILIDH-----LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKM 491
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R + A F+ ++ + LI L K E++E+M K G
Sbjct: 492 RIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG--------- 542
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L P + TY +++ Y G+ KA I +TM G
Sbjct: 543 --------------------LQPNN----ITYNSILTHYCKQGNIKKAADILETMTANGF 578
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA 482
+ T+ L+ GL K GR A
Sbjct: 579 EIDVVTYGTLINGLCKAGRTQVA 601
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 190/511 (37%), Gaps = 68/511 (13%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L+ E A N F Y ++ G A M+ + M+ +G +
Sbjct: 63 LREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQV 122
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT---IVSYTAYMKILFLNDRVKEAT 156
AV S + + D AV++ + + V + + +L ++K
Sbjct: 123 RAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLE 182
Query: 157 DVYKEMIQRGLPPNCY-----------------------------------TYTVLMEYL 181
VY EM RG+ P+ T+T LM+
Sbjct: 183 SVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGF 242
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---A 238
+ G E AL + +KM EAG P N+LI CK G + ++ +
Sbjct: 243 IEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQ 302
Query: 239 LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ Y F L Q V+ + + P+ + N + ++ + G L +G+V
Sbjct: 303 VTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN--GELDEAKGIV 360
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL-LAFEYSVKMDL 356
+ ++D+ D+ +T+I R + AL LA E +VK L
Sbjct: 361 ----------------NQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK-GL 403
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ + + LI L K+ + EEM +G + +LI L S + A
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALD 463
Query: 417 IFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ + + E C T TY +I ++A +++ M +GI S TFN L+ GL
Sbjct: 464 LLNEM-ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGL 522
Query: 474 EKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
K R+ DA I + K+ +Q + ++ +++
Sbjct: 523 CKAKRIDDATELIEQMVKEGLQPNNITYNSI 553
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 199/459 (43%), Gaps = 33/459 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D + +TT ++ F + ++ +F M+E G+ + VT+ +V+ L G D
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A E+M + PT+++Y+ +K L R+ +A V KEM ++G PPN Y L++
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ AG +A+EI M G+ + N LI+ CK G+ +L+ M L++
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM----LSI 442
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN--DAVEFVTTDIEGPLSIDQG-- 295
+ V + + + + L++ +F E + N +TT I G +
Sbjct: 443 GFNVNQGSFTSV-ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501
Query: 296 ---LVLILLKKKNLV---AIDSLLSG----------------IMDKSIQLDSAVISTIIE 333
L L K +V ++LL G I+ + +D +T+I
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C ++ D A + + VK L + Y LI L +N + + ++ + G
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
VY +++I A R + F + Q T Y LI Y +G AL++
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
+ M KGI P+ T+ L+ G+ + RV +A++ +E +
Sbjct: 682 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 720
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 29 IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+K D+YT + + L +E+A F++ R+ G D +TY+ M+D +A+R
Sbjct: 584 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYTYSVMIDGCCKAERTEEG 642
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ F+ M K + + V Y ++ +G + A+ + E+MK K P +YT+ +K
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ + RV+EA +++EM GL PN + YT L++ + G+ + + +M V P+
Sbjct: 703 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE----------ALQTFKVAD 255
K ++I + G +L M+E + +KE L+ FK +D
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 822
Query: 256 END 258
E +
Sbjct: 823 EEN 825
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 166/384 (43%), Gaps = 27/384 (7%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ + K +P+ + + L + ++ + + +++ +G+ P+ Y +T +
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 281
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
+ GK EEA+++FSKM+EAGV P+ N +I+ G + M E +
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341
Query: 239 --LRYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y + + L K + D L F P I N+ ++ I+ G
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF---------IEAG 392
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ ++ K+L ++ K + L S+ +T+I+ C + + D A + + +
Sbjct: 393 SLNKAIEIKDL---------MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 443
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
N+ + ++ ++I +L F V EM S G L LI L + A
Sbjct: 444 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 503
Query: 416 KI-FSLLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++ F L + T T AL+ AG D+A +I K + +G ++N L++G
Sbjct: 504 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 563
Query: 474 EKLGRVSDAEIYRKE--KKSIQAD 495
++ +A ++ E K+ ++ D
Sbjct: 564 CGKKKLDEAFMFLDEMVKRGLKPD 587
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 3/182 (1%)
Query: 40 LKTHPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
L H KA L+F ++++ GF D T +L EA ++ + + + +G
Sbjct: 493 LCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 550
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
+D V+Y +++ +D A +EM + P +Y+ + LF ++V+EA
Sbjct: 551 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 610
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + + G+ P+ YTY+V+++ +A + EE E F +M VQP+ N LI C+
Sbjct: 611 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 670
Query: 219 AG 220
+G
Sbjct: 671 SG 672
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 171/442 (38%), Gaps = 48/442 (10%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY T++ + + + + + + + M G N++ ++TSV+ L + D
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 465
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ EM L+ P T + L + + +A +++ + + +G + T L+
Sbjct: 466 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 525
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L AGK +EA I ++ G D+ + N LI CC + + L M + L
Sbjct: 526 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 585
Query: 239 ---LRYPVF----------KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
Y + +EA+Q + N L P + + + T+
Sbjct: 586 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-----PDVYTYSVMIDGCCKAERTE 640
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
EG D+ +M K++Q ++ V + +I C R AL
Sbjct: 641 -EGQEFFDE---------------------MMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 678
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
E ++ Y +LI + ++ + + EEM G V+ LI
Sbjct: 679 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 738
Query: 406 GSARRPVPAAKIFSLLPEDQKCTA-----TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
G + V K+ LL E TYT +IG Y G+ +A ++ M KGI
Sbjct: 739 GKLGQMV---KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 795
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P T+ + G K G V +A
Sbjct: 796 PDSITYKEFIYGYLKQGGVLEA 817
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 95/469 (20%), Positives = 179/469 (38%), Gaps = 35/469 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TY+ ++ AKRI +V + M +KG + + Y +++ AG ++
Sbjct: 337 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 396
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I + M K T +Y +K N + A + KEM+ G N ++T ++
Sbjct: 397 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 456
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYMKENRLA 238
L ++ AL +M + P LI CK G+ ++ + L +++ +
Sbjct: 457 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG-FV 515
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ L A + D + D + + + G +D+ +
Sbjct: 516 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 299 ILLKKKNLVAIDS-----LLSGI-----MDKSIQL-----------DSAVISTIIEVNCD 337
+ K + D+ L+ G+ ++++IQ D S +I+ C
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS----- 392
R + F+ + ++ Y LI + E+ E+M G S
Sbjct: 636 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 695
Query: 393 -LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
+ G +I R+ A+ ++ L P YTALI Y G K +
Sbjct: 696 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN----VFHYTALIDGYGKLGQMVKVECLL 751
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
+ M K +HP+ T+ V++ G + G V++A E +K I D+++
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 800
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A++F + + + RG D +TY+ ++ ++ ++ + G+ D TY+
Sbjct: 569 LDEAFMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 627
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ A + ++EM K P V Y ++ + R+ A ++ ++M +
Sbjct: 628 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN TYT L++ + + EEA +F +M+ G++P+ LI+ K G+ +
Sbjct: 688 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 747
Query: 226 ILILRYM 232
+LR M
Sbjct: 748 ECLLREM 754
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 199/459 (43%), Gaps = 33/459 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D + +TT ++ F + ++ +F M+E G+ + VT+ +V+ L G D
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A E+M + PT+++Y+ +K L R+ +A V KEM ++G PPN Y L++
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 362
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ AG +A+EI M G+ + N LI+ CK G+ +L+ M L++
Sbjct: 363 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM----LSI 418
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN--DAVEFVTTDIEGPLSIDQG-- 295
+ V + + + + L++ +F E + N +TT I G +
Sbjct: 419 GFNVNQGSFTSV-ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 477
Query: 296 ---LVLILLKKKNLV---AIDSLLSG----------------IMDKSIQLDSAVISTIIE 333
L L K +V ++LL G I+ + +D +T+I
Sbjct: 478 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 537
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C ++ D A + + VK L + Y LI L +N + + ++ + G
Sbjct: 538 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 597
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
VY +++I A R + F + Q T Y LI Y +G AL++
Sbjct: 598 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 657
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
+ M KGI P+ T+ L+ G+ + RV +A++ +E +
Sbjct: 658 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 696
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 29 IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+K D+YT + + L +E+A F++ R+ G D +TY+ M+D +A+R
Sbjct: 560 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYTYSVMIDGCCKAERTEEG 618
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ F+ M K + + V Y ++ +G + A+ + E+MK K P +YT+ +K
Sbjct: 619 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 678
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ + RV+EA +++EM GL PN + YT L++ + G+ + + +M V P+
Sbjct: 679 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 738
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE----------ALQTFKVAD 255
K ++I + G +L M+E + +KE L+ FK +D
Sbjct: 739 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 798
Query: 256 END 258
E +
Sbjct: 799 EEN 801
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 166/384 (43%), Gaps = 27/384 (7%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ + K +P+ + + L + ++ + + +++ +G+ P+ Y +T +
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 257
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
+ GK EEA+++FSKM+EAGV P+ N +I+ G + M E +
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 317
Query: 239 --LRYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y + + L K + D L F P I N+ ++ I+ G
Sbjct: 318 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF---------IEAG 368
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ ++ K+L ++ K + L S+ +T+I+ C + + D A + + +
Sbjct: 369 SLNKAIEIKDL---------MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 419
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
N+ + ++ ++I +L F V EM S G L LI L + A
Sbjct: 420 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 479
Query: 416 KI-FSLLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++ F L + T T AL+ AG D+A +I K + +G ++N L++G
Sbjct: 480 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 539
Query: 474 EKLGRVSDAEIYRKE--KKSIQAD 495
++ +A ++ E K+ ++ D
Sbjct: 540 CGKKKLDEAFMFLDEMVKRGLKPD 563
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 3/182 (1%)
Query: 40 LKTHPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
L H KA L+F ++++ GF D T +L EA ++ + + + +G
Sbjct: 469 LCKHGKHSKALELWFQFLNK--GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 526
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
+D V+Y +++ +D A +EM + P +Y+ + LF ++V+EA
Sbjct: 527 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 586
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + + G+ P+ YTY+V+++ +A + EE E F +M VQP+ N LI C+
Sbjct: 587 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 646
Query: 219 AG 220
+G
Sbjct: 647 SG 648
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 171/442 (38%), Gaps = 48/442 (10%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY T++ + + + + + + + M G N++ ++TSV+ L + D
Sbjct: 382 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 441
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ EM L+ P T + L + + +A +++ + + +G + T L+
Sbjct: 442 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 501
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L AGK +EA I ++ G D+ + N LI CC + + L M + L
Sbjct: 502 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 561
Query: 239 ---LRYPVF----------KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
Y + +EA+Q + N L P + + + T+
Sbjct: 562 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-----PDVYTYSVMIDGCCKAERTE 616
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
EG D+ +M K++Q ++ V + +I C R AL
Sbjct: 617 -EGQEFFDE---------------------MMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 654
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
E ++ Y +LI + ++ + + EEM G V+ LI
Sbjct: 655 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 714
Query: 406 GSARRPVPAAKIFSLLPEDQKCTA-----TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
G + V K+ LL E TYT +IG Y G+ +A ++ M KGI
Sbjct: 715 GKLGQMV---KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 771
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P T+ + G K G V +A
Sbjct: 772 PDSITYKEFIYGYLKQGGVLEA 793
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 95/469 (20%), Positives = 179/469 (38%), Gaps = 35/469 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TY+ ++ AKRI +V + M +KG + + Y +++ AG ++
Sbjct: 313 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 372
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I + M K T +Y +K N + A + KEM+ G N ++T ++
Sbjct: 373 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 432
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYMKENRLA 238
L ++ AL +M + P LI CK G+ ++ + L +++ +
Sbjct: 433 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG-FV 491
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ L A + D + D + + + G +D+ +
Sbjct: 492 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 551
Query: 299 ILLKKKNLVAIDS-----LLSGI-----MDKSIQL-----------DSAVISTIIEVNCD 337
+ K + D+ L+ G+ ++++IQ D S +I+ C
Sbjct: 552 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 611
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS----- 392
R + F+ + ++ Y LI + E+ E+M G S
Sbjct: 612 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 671
Query: 393 -LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
+ G +I R+ A+ ++ L P YTALI Y G K +
Sbjct: 672 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN----VFHYTALIDGYGKLGQMVKVECLL 727
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
+ M K +HP+ T+ V++ G + G V++A E +K I D+++
Sbjct: 728 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 776
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A++F + + + RG D +TY+ ++ ++ ++ + G+ D TY+
Sbjct: 545 LDEAFMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 603
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ A + ++EM K P V Y ++ + R+ A ++ ++M +
Sbjct: 604 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 663
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN TYT L++ + + EEA +F +M+ G++P+ LI+ K G+ +
Sbjct: 664 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 723
Query: 226 ILILRYM 232
+LR M
Sbjct: 724 ECLLREM 730
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 190/470 (40%), Gaps = 42/470 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F + S D FTY+T++D ++ ++ + E M KG + + VTY+
Sbjct: 200 LDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS 259
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++H L AG +D A + + M C P IV+Y + R+ EA + +EM+
Sbjct: 260 SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 319
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TYTVL++ + GK E+A+ + M E G P+ N L++ CK E
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 379
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEF 281
+L M + + Y L E LL Q + P+ ++ N ++
Sbjct: 380 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 439
Query: 282 VTTDIEGPLSIDQGLVLILLKKK-----NLVAIDSLLSGIMDKSIQLDSA---------- 326
+ +D L L ++ NLV +SL+ G+ KS + D A
Sbjct: 440 MCKTYR----VDIAYELFNLIQESGCTPNLVTYNSLVHGLC-KSRRFDQAEYLLREMTRK 494
Query: 327 --------VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+T+I+ C +R D A F + L + Y +I L K +
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 554
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL------PEDQKCTATYT 432
++E M K G G LI A +I LL P+ T++
Sbjct: 555 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD----VVTFS 610
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I G +A ++ +TM R G+ P T+N LL G R DA
Sbjct: 611 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDA 660
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 186/462 (40%), Gaps = 53/462 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVD 118
RG+ + TY ++ +++ S +F+ M+E G D TY++++ L +G VD
Sbjct: 178 RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 237
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + E M K C P +V+Y++ + L ++ EAT + + M + G PN TY ++
Sbjct: 238 DACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 297
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + G+ +EA + +M + G QP+ +L++ CK G+ I ++ M E
Sbjct: 298 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 357
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ L F DE + + + + + V + + +G++
Sbjct: 358 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVL- 416
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
LL ++ + D +TII+ C R D A F +
Sbjct: 417 -------------LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 463
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMT-KAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y +L+ L K F + ++ EMT K G S + +I L ++R A K+
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 523
Query: 418 F------SLLPED-------------------------------QKCTATYTALIGVYFS 440
F L P+D TY LI +
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G+ DKAL+I + + KG +P + TF++ + L K GR+ A
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 625
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 190/460 (41%), Gaps = 65/460 (14%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A L F +S++ D TY TM++ ++ R+ + E M + G + +Y +V+
Sbjct: 29 AVLHFREMSKT--CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVL 86
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
H A V+ A+ + E+M ++ C P +VSYT + L D+V EA V +MIQRG
Sbjct: 87 HGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 146
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN TY L++ R G + A+E+ KM E G +P+ N ++ C + + + +
Sbjct: 147 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQL 206
Query: 229 LRYMKENRLA----LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+ M+E+ Y ++L ++ KV D + V SP ++ +
Sbjct: 207 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS------- 259
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
S+ GL K L +LL + + +TII+ +C R D
Sbjct: 260 -------SLLHGLC----KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 308
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A E V Y L+ K +VE M + G+
Sbjct: 309 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY------------ 356
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
VP +F TY +L+ ++ ++A ++ +M +KG P++
Sbjct: 357 --------VP--NLF-----------TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 395
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
++N ++AGL K +V + + ++ LS + VP
Sbjct: 396 VSYNTVIAGLCKATKVHEGVLLLEQ-------MLSNNCVP 428
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 190/456 (41%), Gaps = 36/456 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + F+Y T+L F +A R+ + ++ E M +G D V+YT+V++ L VD A
Sbjct: 74 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEA 133
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++M + C P +++Y + + A ++ ++M +RG PN TY +M
Sbjct: 134 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHG 193
Query: 181 LVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L K + AL++F +M+E+G PD + +++ K+G+ ++ M +
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP 253
Query: 240 RYPVFKEALQTFKVA---DENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ L A DE +LL ++ SP ++ N T I+G + +
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN-------TIIDGHCKLGR- 305
Query: 296 LVLILLKKKNLVAIDS---LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
ID LL ++D Q + + +++ C + + A+ E V
Sbjct: 306 -------------IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 352
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ Y +L+ + K + + +++ M + G V +I L A +
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412
Query: 413 PAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
+ + + C T+ +I D A +++ + G P+L T+N L
Sbjct: 413 EGVLLLEQMLSNN-CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSL 471
Query: 470 LAGLEKLGRVSDAEIYRKE---KKSIQADALSKDAV 502
+ GL K R AE +E K+ D ++ + V
Sbjct: 472 VHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 507
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 160/365 (43%), Gaps = 23/365 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G+ + FTY ++LD+F + + + M +KG + V+Y +V+ L A V
Sbjct: 354 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 413
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
V + E+M C P IV++ + + RV A +++ + + G PN TY L+
Sbjct: 414 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 473
Query: 180 YLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L ++ ++++A + +M ++ G PD N +I+ CK+ + M + LA
Sbjct: 474 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 533
Query: 239 ---LRYPVFKEALQTFKVADE-NDSLLWQVHPQFSPEFISDNDAVEFV--TTDIEGPLSI 292
+ Y + +L ++ DE N+ L + F P I+ ++ T +++ L I
Sbjct: 534 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 593
Query: 293 DQGL-------------VLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
Q L + I L K+ L LL ++ + D+ +T+++ CD
Sbjct: 594 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCD 653
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK-VAEIVEEMTKAGHSLGVY 396
R + A+ FE + + Y L+G L+ ++ +AE+ + M G L
Sbjct: 654 ASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHE 713
Query: 397 LGALL 401
L + L
Sbjct: 714 LSSKL 718
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 111/216 (51%), Gaps = 10/216 (4%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKW----DSYTVNQV---LKTHPPMEKAW-LFFNWVS 57
S V+ + K +D A+ LL+ + K D T N V L +++A+ LF +S
Sbjct: 470 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 529
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
G D TY+ ++ + + + V ELM + G + A+TY +++ G++
Sbjct: 530 D--GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 587
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I + + K YP +V+++ ++ L R+++A ++ + M++ GL P+ TY L
Sbjct: 588 DKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTL 647
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
++ A + E+A+++F M++ G +PD A L+
Sbjct: 648 LKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 4/226 (1%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEKGINIDAVTYTSV 107
A+ FN + S G + TY +++ +++R +Y+ E+ +++G + D +TY +V
Sbjct: 449 AYELFNLIQES-GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 507
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L + VD A ++ +M P V+Y+ + L + EA +V + M++ G
Sbjct: 508 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 567
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P TY L++ + G ++ALEI + G PD +I I+ K G R
Sbjct: 568 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 627
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSL--LWQVHPQFSPE 271
+L M L + L+ F A + L++V Q E
Sbjct: 628 LLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCE 673
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 10/175 (5%)
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
K ++ + V +I+ CD + A+L F K + Y +I L K +
Sbjct: 4 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDD 62
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA-----AKIFSLLPEDQKCTATYTA 433
++EEM G + V+ ++H A R A + P D +YT
Sbjct: 63 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPD---VVSYTT 119
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
+I D+A ++ M ++G P++ T+ L+ G ++G + A E+ RK
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 174
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 8 VYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
V ILK W A + L NL D+Y NQ+LK A FF W+ R GF HD
Sbjct: 324 VKDILKQLRWGPATEKTLYNLNFSIDAYQANQILKQLQDHSVAVGFFCWLKRQPGFWHDG 383
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TYTTM+ I G A+ ++ + E M + G + VTY ++H A + A+N++ +
Sbjct: 384 HTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQ 443
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M+ C P V+Y + I + A +Y+ M + GL P+ +TY+V++ L ++G
Sbjct: 444 MQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGN 503
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
A +F +M + G P+ NILI KA +T + + R M+
Sbjct: 504 LSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQN 551
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY T++DI +A + ++E MQE G++ D TY+ +++ L +G++ A
Sbjct: 448 GCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAA 507
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM + C P IV+Y + + + A ++Y++M G P+ TY+++ME
Sbjct: 508 HRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEV 567
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L G EEA +F +M++ PD+ +L++ KAG
Sbjct: 568 LGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGN 608
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY+ M++ G++ +S+ +F M ++G + VTY ++ + A + A
Sbjct: 483 GLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTA 542
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +M+ P V+Y+ M++L ++EA V+ EM Q P+ Y +L++
Sbjct: 543 LELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDL 602
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+AG E+A E + M AG+ P+ CN L+
Sbjct: 603 WGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLL 635
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ + +A+ + ++ MQ G D VTY+ VM L + G ++ A ++ EM
Sbjct: 525 TYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEM 584
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P Y + + V++A + Y M++ GL PN T L+ +R +
Sbjct: 585 RQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRL 644
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+A + M G+ P +L+ C +A
Sbjct: 645 PDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEA 676
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++GIL + F + +++E+M K G V LIH G A A +F+ +
Sbjct: 386 YTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQM- 444
Query: 423 EDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
++ C TY LI ++ AG D A+ +Y+ M G+ P T++V++ L K G +
Sbjct: 445 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNL 504
Query: 480 SDAE 483
S A
Sbjct: 505 SAAH 508
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 4/191 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V IL + + AI+ LL ++ Q + + +I AL F +M
Sbjct: 389 MVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMG 448
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K + E M + G S + +++I+ LG + A
Sbjct: 449 CEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAH 508
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++F + DQ C TY LI + A + AL++Y+ M G P T+++++
Sbjct: 509 RLFCEM-VDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEV 567
Query: 473 LEKLGRVSDAE 483
L G + +AE
Sbjct: 568 LGHCGYLEEAE 578
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 58/127 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ GF D+ TY+ ++++ G + + VF M++ D Y ++ AG+V
Sbjct: 550 QNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNV 609
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + M P + + + + R+ +A ++ + M+ GL P+ TYT+L
Sbjct: 610 EKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLL 669
Query: 178 MEYLVRA 184
+ A
Sbjct: 670 LSCCTEA 676
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 115/321 (35%), Gaps = 51/321 (15%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q G + +TYT ++ L RA ++ ++ +M + G QP+ N LI
Sbjct: 376 QPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHS-------- 427
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
Y + N L +EAL F E + D V + T
Sbjct: 428 -------YGRANYL-------REALNVFNQMQE---------------MGCEPDRVTYCT 458
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
L+ I K L S+ + + + D+ S +I
Sbjct: 459 ------------LIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSA 506
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A F V Y LI + K + E+ +M AG ++++
Sbjct: 507 AHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVME 566
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LG A +F + ++ Y L+ ++ AG+ +KA + Y TM R G+ P
Sbjct: 567 VLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLP 626
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
++ T N LL+ ++ R+ DA
Sbjct: 627 NVPTCNSLLSAFLRVHRLPDA 647
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 210/500 (42%), Gaps = 67/500 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R + D ++Y ++D +A +++ + +F+ + G+ V YTS++H L A D
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ +M + C P+ V+Y + ++EA D+ K+MI+ G P+ TY +M+
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
L ++G+ EEAL +F++M+ G P++ + N +I C+ + + M+ +
Sbjct: 124 GLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP 183
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y + + L +E L + + +P ++ N + + ++D+
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCL----AYTLDEA 239
Query: 296 LVLI-LLKKKNL--------VAIDSLLS-GIMDKSIQL-----------DSAVISTIIEV 334
L L ++ K + ID+ G MD++ +L D ST+I
Sbjct: 240 LELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISG 299
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C R D A E VK LI L K + E+++ M +G S
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359
Query: 395 VYLGALLIH---RLGS------------ARRPVPAAKIFSL----------LPE------ 423
V L+H R G AR P ++ LPE
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 419
Query: 424 ---DQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
C TYTALI + SAG D LK++ M GI P + L A L K G
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479
Query: 478 RVSDA-EIYRKEKKSIQADA 496
R + A EI R+ ++S++++A
Sbjct: 480 RSARALEILREGRESLRSEA 499
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T T++ +A RI + V + M G + D VTY +++H AG + A + +M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +V+YTA + L +R+ EA V+ +M G PN +TYT L+ AG+
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ L++F +M AG+ PD L + CK+G + + ILR E R +LR + +
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR---EGRESLRSEAWGDE 503
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISD 275
+ F V D LL + + F+ D
Sbjct: 504 VYRFAV----DGLLDAGKMEMALGFVRD 527
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 11/229 (4%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
+YT+++ L+ M RS+G RFT+ ++D + ++ + + M
Sbjct: 233 AYTLDEALELFKSM-----------RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRM 281
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ G D VTY++++ L + VD A ++ E+M ++C PT+V+ + L R+
Sbjct: 282 TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 341
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
KEA +V M+ G P+ TY L+ RAG+ E A E+ S M G+ P+ L
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ CKA + MK + A + + F A + D L
Sbjct: 402 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 178/418 (42%), Gaps = 31/418 (7%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M E+ ++ D+ +Y ++ L+ AG ++ A ++++++ P+ V+YT+ + L + +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+A +++ +M +RG PP+ TY V+++ + G EEA ++ KM E G PD N
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 212 LIEKCCKAGETRTIILILRYMKE-----NRLA--------LRYPVFKEALQTFKVADEN- 257
+++ CK+G +L+ M+ NR + + +A Q F +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 258 ---DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS--------IDQGLVLILLKKKNL 306
DS + + + N+A + ++ ++ + G+ L + L
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
S+ S K + + +I+ +C + D A + + Y L
Sbjct: 241 ELFKSMRS----KGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I L + ++E+M K V LIH L A R A ++ + +
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356
Query: 427 C--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY L+ + AG ++A ++ M +G+ P++ T+ L++GL K R+ +A
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
P + T+ L +++A F+ + +R D ++Y ++D +A +++
Sbjct: 148 PNRRSHNTIILGLCQQSKIDQACQVFHEME-ARDIPPDSWSYGILIDGLAKAGKLNEAYK 206
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F M + GI AVTY V+H + A +D A+ +++ M+ K C P+ ++ +
Sbjct: 207 LFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHC 266
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++ EA + K M G P+ TY+ L+ L + ++A + M + +P
Sbjct: 267 KRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326
Query: 208 ACNILIEKCCKAGETRTIILILRYM 232
N LI CKAG + +L M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAM 351
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + D TY T++ A + + + M +G+ + VTYT+++ L A +
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ +MK C P + +YTA + +V ++ EM+ G+ P+ Y L
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472
Query: 179 EYLVRAGKYEEALEIFSKMQEA 200
L ++G+ ALEI + +E+
Sbjct: 473 AELCKSGRSARALEILREGRES 494
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + TYT ++ +A R+ VF M+ G + TYT+++ +AG VD
Sbjct: 388 ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 447
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ--RGLPPNCYTYTV 176
G + ++ EM P V Y L + R A ++ +E + R Y
Sbjct: 448 GGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRF 507
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ L+ AGK E AL M G P C L+ CK+G+
Sbjct: 508 AVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 552
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 1/218 (0%)
Query: 5 ISNVYKILKYSTW-DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
++ V IL W D L L ++Y VN++LK A+ FF W + GF
Sbjct: 5 VARVCGILNQHGWGDETVRALAGLNASLNAYQVNEILKQQKEAGVAYNFFIWARKQAGFK 64
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTT+L I G AK + + + M +G + VTY ++H A D+D ++ +
Sbjct: 65 HDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKL 124
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ M++ C P V+Y + + A ++Y++M G P+ +TY++++ L +
Sbjct: 125 FNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGK 184
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
AGK A ++F +M + G P NI+I+ KAG+
Sbjct: 185 AGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGK 222
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FN V + G DR TY T++D+ +A + ++ MQ G D TY+ ++H L
Sbjct: 124 LFN-VMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCL 182
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
AG ++ A ++ EM + P++V+Y + + + A +Y ++ + G P+
Sbjct: 183 GKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDR 242
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
TY ++ME L G E+A ++F +M+ AG D ++++ K G
Sbjct: 243 VTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNR 302
Query: 232 MKENRLALRYPVFKEALQTF 251
M ++ L P L +
Sbjct: 303 MLDSGLQPNVPACNSLLSAY 322
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 126/338 (37%), Gaps = 51/338 (15%)
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ +YT + IL ++ EMI+ G PN TY L+ RA + +L++F+
Sbjct: 67 VHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFN 126
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
MQ G +PD+ LI+ KAG + + R M+
Sbjct: 127 VMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQ---------------------- 164
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
H F P+ + SI ++ L K L A L
Sbjct: 165 ---------HAGFRPDTFT---------------YSI---IIHCLGKAGKLNAAYKLFCE 197
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ D+ + II+++ + D AL + ++ +R Y ++ +L
Sbjct: 198 MTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGH 257
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTA 433
++ EEM +AG + L++ G AA+ F+ + + Q +
Sbjct: 258 IEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNS 317
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
L+ Y + D A + M + G++P+L T+ LL+
Sbjct: 318 LLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLS 355
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
IL + K+ +++LL ++ + + + + +I D +L F +
Sbjct: 76 ILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEP 135
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R Y LI + K E+ +M AG + +++IH LG A + A K+F
Sbjct: 136 DRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLF 195
Query: 419 SLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ + + TY +I ++ AG D ALK+Y + G P T+ +++ L
Sbjct: 196 CEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNC 255
Query: 477 GRVSDAE 483
G + DAE
Sbjct: 256 GHIEDAE 262
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++GIL + +F + +++EM + G V LIH G A + K+F+++
Sbjct: 70 YTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVM- 128
Query: 423 EDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ C TY LI + AG D A+++Y+ M G P T+++++ L K G++
Sbjct: 129 QMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKL 188
Query: 480 SDA 482
+ A
Sbjct: 189 NAA 191
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 3/170 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ DR TY ++++ G I + VFE M+ G D + ++ G+ + A
Sbjct: 237 GYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKA 296
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ M P + + + + + A V M + GL P TYT L+
Sbjct: 297 AQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSS 356
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
E +F M G C++L G T+++ +R
Sbjct: 357 CAACRAAWEYDALFGLMGGTGHPAHPFVCSLLASGGTAGG---TMVVGIR 403
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 4 TISNVYKILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
+ Y L+ W + +L L K D++ NQVLK A FF+W+ R GF
Sbjct: 300 AVEQYYHTLQQMKWGPMTEHVLDGLRCKIDAFQANQVLKLLHDHNIALGFFHWLKRQPGF 359
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
HD TYTTM+ I G+AK+ +M+ + + M VTY ++H A + AV
Sbjct: 360 KHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVK 419
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++EEM+ P V+Y + I + ++ A D+Y M + GL P+ +TY+ ++ L
Sbjct: 420 VFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLG 479
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---AL 239
+ G+ A ++F +M + G P+ NI+I KA ++ + R M+ +
Sbjct: 480 KGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKI 539
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
Y + E L DE +++ ++ ++P+
Sbjct: 540 TYSIVMEVLGHCGHLDEAEAVFLEMRRDWAPD 571
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY+ M++ G+ ++++ +F M + G + VTY ++ + A + D
Sbjct: 463 GLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNV 522
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++ +M++ P ++Y+ M++L + EA V+ EM +R P+ Y +L++
Sbjct: 523 VKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEM-RRDWAPDEPVYGLLVDL 581
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+AG ++AL + M + G+QP+ CN L+ K + +L+ M
Sbjct: 582 WGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNM 633
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D+ TY+ ++++ G + + VF L + D Y ++ AG+VD A
Sbjct: 533 GFRPDKITYSIVMEVLGHCGHLDEAEAVF-LEMRRDWAPDEPVYGLLVDLWGKAGNVDKA 591
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + M P + + + + +R ++A V + M+ +GL P+ TYT+L+
Sbjct: 592 LGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLS 650
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I + K + V ++ +M AG ++++ LG A +F +
Sbjct: 506 YNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMR 565
Query: 423 ED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
D Y L+ ++ AG+ DKAL Y M + G+ P++ T N LL+ KL R D
Sbjct: 566 RDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQD 625
Query: 482 A 482
A
Sbjct: 626 A 626
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +IGIL + F + ++++EM+ V +IH G A A K+F +
Sbjct: 366 YTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKVFEEME 425
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
Q TY LI ++ +G + A+ +Y M G+ P T++ ++ L K G+++
Sbjct: 426 GAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLA 485
Query: 481 DA 482
A
Sbjct: 486 AA 487
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+ FE +R Y LI I K ++ M + G S + + +++
Sbjct: 417 AVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVN 476
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LG + A K+F + D CT TY +I + A + D +K+Y+ M G
Sbjct: 477 CLGKGGQLAAAYKLFCEM-IDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFR 535
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P T+++++ L G + +AE
Sbjct: 536 PDKITYSIVMEVLGHCGHLDEAE 558
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 206/486 (42%), Gaps = 28/486 (5%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
+K ++ ++ ++K + + W+F + +G + D + ++T ++ F + ++ +
Sbjct: 279 VKTCTFLLSSLVKANELEKSYWVF---ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQL 335
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F M++ G++ + VTY +++H L G++D A E+M T+++Y+ + L
Sbjct: 336 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 395
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
++ EA V KE +++G PN Y L++ + G +AL I M G+ P+
Sbjct: 396 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 455
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ------TFKVA-------- 254
N +I+ CK G+ IL M ++ F + F+ A
Sbjct: 456 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 515
Query: 255 ----DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE----GPLSIDQGLVLILLKKKNL 306
ND LL + E +DAVE +E L L+ L K N+
Sbjct: 516 LRNMRPNDGLLTTLVGGLCKEG-KHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 574
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
LL ++++ LD +T+I C + + VK + + Y L
Sbjct: 575 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 634
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQ 425
I + ++ + + E VY ++I A + K+F+ LL ++
Sbjct: 635 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 694
Query: 426 KCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ + Y LI Y G+ +A K++ M KGI P+ T++ L+ G+ +GR+ DA+
Sbjct: 695 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 754
Query: 485 YRKEKK 490
E +
Sbjct: 755 LIDEMR 760
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 179/458 (39%), Gaps = 76/458 (16%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G N + T +++ F + ++ + + E M +G +I+ +T+++HWL +
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 505
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ EM L+ P T + L + +A +++ ++++G N T L+
Sbjct: 506 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 565
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + G +EA+ + KM E G DK N LI CCK G+ E
Sbjct: 566 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV-----------EEGFK 614
Query: 239 LRYPVFKEALQ--TF----------KVADENDSL-LWQ-----------------VHPQF 268
LR + K+ ++ TF ++ ++++ LW +
Sbjct: 615 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 674
Query: 269 SPEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ I + + + E +T ++E + L+ + N V L + K I +A
Sbjct: 675 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 734
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
S++I C+ R + A + K L Y ALIG KL KV +++EM
Sbjct: 735 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 794
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
+ + + P TYT +I Y +G
Sbjct: 795 SS-----------------------------YDIHPNK----ITYTVMIDGYSKSGDMKT 821
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
A K+ M KGI P T+NVL G K G++ + ++
Sbjct: 822 AAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKL 859
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 171/438 (39%), Gaps = 59/438 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T T +L +A + +VFE M++ G++ D +++ ++ G V+ A+ ++ +M
Sbjct: 281 TCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM 339
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +V+Y + L + + EA ++M++ G+ TY+VL+ L++ K+
Sbjct: 340 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 399
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA + + E G P++ N LI+ CK G + I M
Sbjct: 400 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM--------------- 444
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
V +P ++ N SI QG K +
Sbjct: 445 ----------------VSKGINPNSVTLN--------------SIIQGFC----KIGQME 470
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ +L ++ + ++ +TII C + R + AL + ++ L+
Sbjct: 471 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 530
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
G L K E+ + + G + LIH L A ++ + E
Sbjct: 531 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 590
Query: 428 --TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
TY LI G ++ K+ M ++GI P T+N+L+ G+ ++G++ +A
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650
Query: 486 RKEKKSIQADALSKDAVP 503
E K S+D VP
Sbjct: 651 WNECK-------SRDLVP 661
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 89/175 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SR + +TY M+D + +A +I + +F + + + +++V Y +++ G+
Sbjct: 655 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 714
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + ++M+ K PT +Y++ + + R+++A + EM + GL PN YT L
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 774
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ + G+ ++ + + +M + P+K ++I+ K+G+ +T +L M
Sbjct: 775 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 829
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS+G TY++++ R+ K + + M+++G+ + V YT+++ G +
Sbjct: 725 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 784
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D VN+ +EM + +P ++YT + + +K A + EM+ +G+ P+ TY VL
Sbjct: 785 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 844
Query: 178 MEYLVRAGKYEEA 190
+ GK EE
Sbjct: 845 TNGFCKEGKIEEG 857
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 4 TISNVYKILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
++ Y L+ W + +L NL K D++ NQVLK A FF W+ R GF
Sbjct: 303 SVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLLHDHTIALGFFQWLKRQPGF 362
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
HD +YTTM+ I G+A++ +M+ + + M VTY ++H A + AV
Sbjct: 363 KHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVK 422
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++EEM+ P V+Y + I ++ A D+Y M + GL P+ +TY+ ++ L
Sbjct: 423 VFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLG 482
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---AL 239
+ G A ++F +M E G P+ NI+I KA ++ + + M+ +
Sbjct: 483 KGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKI 542
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
Y + E L DE +++ ++ ++P+
Sbjct: 543 TYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPD 574
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 34/206 (16%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ DR TY T++DI + + ++ MQE G++ D TY+++++ L G + A
Sbjct: 431 GYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAA 490
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM C P +V+Y + + + +YK+M G P+ TY+++ME
Sbjct: 491 YKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEV 550
Query: 181 LVRAGKYEEALEIFSKMQ----------------------------------EAGVQPDK 206
L G +EA +F +M+ + G+QP+
Sbjct: 551 LGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNV 610
Query: 207 AACNILIEKCCKAGETRTIILILRYM 232
CN L+ K + +L+ M
Sbjct: 611 PTCNSLLSAFLKINRFQDAYSVLQNM 636
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ + +A+ ++ +++ MQ G D +TY+ VM L + G +D A ++ EM
Sbjct: 508 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 567
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ + P Y + + V +A Y M+Q GL PN T L+ ++ ++
Sbjct: 568 R-HDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRF 626
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
++A + M G+ P +L+ C +A
Sbjct: 627 QDAYSVLQNMLAQGLVPSLQTYTLLLSCCTEA 658
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D+ TY+ ++++ G + + VF M+ D Y ++ AG+VD A
Sbjct: 536 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWA-PDEPVYGLLVDLWGKAGNVDKA 594
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + M P + + + + +R ++A V + M+ +GL P+ TYT+L+
Sbjct: 595 LGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSC 654
Query: 181 LVRA 184
A
Sbjct: 655 CTEA 658
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I + K + V ++ ++M AG ++++ LG A +F +
Sbjct: 509 YNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 568
Query: 423 ED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
D Y L+ ++ AG+ DKAL Y M + G+ P++ T N LL+ K+ R D
Sbjct: 569 HDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQD 628
Query: 482 A 482
A
Sbjct: 629 A 629
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+ FE K +R Y LI I K ++ M + G S + + +++
Sbjct: 420 AVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVN 479
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LG A K+F + E+ CT TY +I + A + + +K+YK M G
Sbjct: 480 CLGKGGHLAAAYKLFCEMVEN-GCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFR 538
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P T+++++ L G + +AE
Sbjct: 539 PDKITYSIVMEVLGHCGHLDEAE 561
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+Y +IGIL + F + ++++EM V +IH G A A K+F
Sbjct: 368 SYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFE-- 425
Query: 422 PEDQKCT-----ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
E QK TY LI ++ G + A+ +Y M G+ P T++ ++ L K
Sbjct: 426 -EMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKG 484
Query: 477 GRVSDA 482
G ++ A
Sbjct: 485 GHLAAA 490
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 123/588 (20%), Positives = 239/588 (40%), Gaps = 102/588 (17%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWV 56
+ I NV+ + + W+ L++ + I D+YT N ++ K ++A F +
Sbjct: 247 NVILNVFGKMG-TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFEL------------------------ 91
++ GF+HD+ TY +LD++G++ R +MK + E+
Sbjct: 306 -KAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGM 364
Query: 92 ----------MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
M EKG D TYT+++ AG V+ A+NI+EEM+ C P I ++ A
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNA 424
Query: 142 YMK-----------------------------------ILFLNDRVKEATDVYKEMIQRG 166
++K + N E + V+KEM + G
Sbjct: 425 FIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
P T+ L+ R G +E+A+ ++ +M +AGV PD + N ++ + G
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
+L M++ R + L + E + +H A E + I
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKE----IGLMHSL----------AEEVYSGVI 590
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
E + + LVL+ K L + S + ++ D +++++ + + A
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANE 650
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
+Y + Y +L+ + + F K EI+ E+ G + +I+
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 407 SARRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
R A++IFS ++P+ TY IG Y + ++A+ + + M + G
Sbjct: 711 RNTRMRDASRIFSEMRDSGIVPD----VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766
Query: 461 PSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
P+ T+N ++ G KL R +A+++ ++ +++ A + + + E+I
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERI 814
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 196/484 (40%), Gaps = 69/484 (14%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNH--DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
L H + A F+W + + + D ++ + G+ R+SS +F +QE G
Sbjct: 145 LGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGF 204
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF-LNDRVKEAT 156
++D +YTS++ +N+G AVN++++M+ + C PT+++Y + + + + T
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKIT 264
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ ++M G+ P+ YTY L+ R ++EA ++F +M+ AG DK N L++
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVY 324
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
K+ + + +L M+ N FSP ++ N
Sbjct: 325 GKSHRPKEAMKVLNEMELN-------------------------------GFSPSIVTYN 353
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ D G++ ++ KN +A +K + D +T++
Sbjct: 354 SLISAYARD---------GMLDEAMELKNQMA---------EKGTKPDVFTYTTLLSGFE 395
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ + A+ FE + A I + F + +I +E+ G S +
Sbjct: 396 RAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIV 455
Query: 397 LGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
L+ G + +F +PE + T+ LI Y GS ++A+ +
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE----TFNTLISAYSRCGSFEQAMTV 511
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICD 510
Y+ M G+ P L T+N +LA L + G +E + A+ P E C
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE-------KVLAEMEDGRCKPNELTYCS 564
Query: 511 LLYG 514
LL+
Sbjct: 565 LLHA 568
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 183/428 (42%), Gaps = 18/428 (4%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+T ++DI + + V++ + +KG +D Y ++ + +G +D A+ ++ EM
Sbjct: 67 AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K+K P +Y + L RV+EA + M++RGL PN TY +LM+ + G+
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ AL +F++M+ G QP NIL++ C AG + M + + +
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ + + H F E + AV+ V + L+ L K N+
Sbjct: 247 VNGLG----KSGRVEEAHKVFR-EMVDRGVAVDLVNYN---------SLLATLAKAGNMD 292
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ L+ + K D+ +TI++ + D A F V+ + +Y LI
Sbjct: 293 RVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILI 352
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
+ + +++EEM +AG LIH L + + A + + E C
Sbjct: 353 DSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM-ETAGC 411
Query: 428 ---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY L+ + G +A ++++ M KG+ P ++ V + GL R+ +A +
Sbjct: 412 RPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALV 471
Query: 485 YRKEKKSI 492
K+ K++
Sbjct: 472 LFKDMKAV 479
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 36/212 (16%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV--- 102
M++ W +SR +GF+ D F++ T++D G+A + + + VF M E G D +
Sbjct: 291 MDRVWKLMKEMSR-KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYN 349
Query: 103 --------------------------------TYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
TY S++HWL+ G VD A + EEM+
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P +V+Y M +L + A ++++M +G+ P+ +Y V ++ L + +EA
Sbjct: 410 GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L +F M+ G DKA ILI +AG+T
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAGDT 501
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 158/370 (42%), Gaps = 26/370 (7%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ + + C PT+ ++T + IL + + A VYK+++Q+G + + Y VL+
Sbjct: 49 AFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIR 108
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
Y R+G+ + A+E+F +M+ G +PD+ L+ KAG + M E L
Sbjct: 109 YFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTP 168
Query: 240 RYPVFKEALQTFKVADEND---SLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
P + + F+ + D L ++ + F P ++ N
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI------------------ 210
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ L + A L + DS ST++ R + A F V
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ ++ Y +L+ L K +V ++++EM++ G + ++ LG A +P A
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++F+ + E C +Y LI Y G A +A ++ + M G P T+N L+
Sbjct: 331 EVFARMVE-SGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHW 389
Query: 473 LEKLGRVSDA 482
L G+V +A
Sbjct: 390 LATDGQVDEA 399
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 90/173 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D +TY +++ G+A R+ + F+ M E+G+ + TY +M G +D
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ EMK + P++V+Y + L RV A ++ +M G P+ YTY+ L+
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L ++G+ EEA ++F +M + GV D N L+ KAG + +++ M
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 93/177 (52%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RGF TY +LD A R+ + + +F M G + D+ TY+++++ L +G V
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRV 256
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++ EM + +V+Y + + L + + KEM ++G P+ +++ +
Sbjct: 257 EEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTI 316
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
M+ L +A K + A E+F++M E+G +PD + NILI+ + G+ +L M E
Sbjct: 317 MDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 88/173 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D +TY+T+++ G++ R+ VF M ++G+ +D V Y S++ L+ AG++D
Sbjct: 235 GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRV 294
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +EM K +P S+ M L ++ A +V+ M++ G P+ +Y +L++
Sbjct: 295 WKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDS 354
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
R G +A ++ +M EAG P+ N LI G+ +L M+
Sbjct: 355 YARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEME 407
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 218/511 (42%), Gaps = 88/511 (17%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRS-RGFNHDRFTYTTMLDI------------------- 75
V +V+ + + A FF W S GF+H F++ ++L +
Sbjct: 46 VGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELL 105
Query: 76 ----------------FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
F A + + + E M+ G DA T+T ++ ++NAGD+DG
Sbjct: 106 ASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDG 165
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++ M C P +V+YTA + +++EA + +EM +RG PPN TY VL++
Sbjct: 166 AMDHLRSMG---CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVD 222
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTI--ILILRYMKE 234
L + A ++ KM E G P+ N L++ CK G + R + I++ + M+
Sbjct: 223 ALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP 282
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID- 293
N + Y + L S +F+ + +E + T P +
Sbjct: 283 N--VVTYSALIDGLCK------------------SQKFLEAKEVLEEMKTRGVTPDAFTY 322
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L+ L K + + +L + D V S+II C + G LL + +++
Sbjct: 323 SALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC----KSGKLLEAQKTLQ 378
Query: 354 MDLNLERTA-----YLALIGILIKLNTFPKVAEIVEEMTKAGHSL-GVYLGALLIHRLGS 407
++ +R + Y +I L KL + I+E+M ++G L V + +I+ L
Sbjct: 379 -EMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCK 437
Query: 408 ARRPVPAAKIFSLLPEDQKCTA-------TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
+ V A K+ D+ C A TYT +I G ++A + + M R G
Sbjct: 438 SDMLVEAQKLL-----DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCA 492
Query: 461 PSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
P++ T+ L++GL K +V +AE +E ++
Sbjct: 493 PNVVTYTTLISGLCKARKVDEAERVMEEMRN 523
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 189/454 (41%), Gaps = 35/454 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S GF D FT+T ++ A + + ++ G + + VTYT+++ + A +
Sbjct: 139 KSAGFAPDAFTHTPIITAMANA---GDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKL 195
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ + EEM+ + C P +V+Y + L V A DV K+MI+ G PN T+ L
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ + G ++A ++ M G++P+ + LI+ CK+ + +L MK +
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315
Query: 238 ---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
A Y L +E + +L ++ A T D+ +
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRM-------------AGSGCTPDV----VVYS 358
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++ K L+ L + + D +T+I+ C + A + E +
Sbjct: 359 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQES 418
Query: 355 -DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL------GALLIHRLGS 407
D+ + Y +I L K + + ++++ M KAG + V G RL
Sbjct: 419 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 478
Query: 408 ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A + K P TYT LI A D+A ++ + M G P+L T+N
Sbjct: 479 AEYLLQGMKRAGCAPN----VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 534
Query: 468 VLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDA 501
++ GL GR+ +A+ + K +A+ S DA
Sbjct: 535 TMVNGLCVSGRIKEAQQLVQRMKDGRAEC-SPDA 567
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 172/404 (42%), Gaps = 23/404 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG + TY ++D + + + + V + M E G + +T+ S++ G+V
Sbjct: 206 RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNV 265
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + M K P +V+Y+A + L + + EA +V +EM RG+ P+ +TY+ L
Sbjct: 266 DDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSAL 325
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L +A K EEA ++ +M +G PD + +I CK+G+ L+ M++ R
Sbjct: 326 IHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRK 385
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + Y + L E +L Q+ Q S + + D V +T I G
Sbjct: 386 SPDVVTYNTVIDGLCKLGKIAEAQVILEQM--QESGDVLPD---VVTYSTVING------ 434
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L K LV LL + D +TII+ C R + A + +
Sbjct: 435 -----LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA 489
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
Y LI L K + ++EEM AG + +++ L + R A
Sbjct: 490 GCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEA 549
Query: 415 AKIFSLLPEDQ-KCT---ATYTALIGVYFSAGSADKALKIYKTM 454
++ + + + +C+ ATY ++ S+ +A ++ + M
Sbjct: 550 QQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 205/486 (42%), Gaps = 28/486 (5%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
+K ++ ++ ++K + + W+F + +G + D + ++T ++ F + ++ +
Sbjct: 212 VKTCTFLLSSLVKANELEKSYWVF---ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQL 268
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F M++ G++ + VTY +++H L G++D A E+M T+++Y+ + L
Sbjct: 269 FFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMK 328
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
++ EA V KE +++G PN Y L++ + G +AL I M G+ P+
Sbjct: 329 LEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVT 388
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ------TFKVA-------- 254
N +I+ CK G+ IL M ++ F + F+ A
Sbjct: 389 LNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML 448
Query: 255 ----DENDSLLWQVHPQFSPEFISDNDAVE----FVTTDIEGPLSIDQGLVLILLKKKNL 306
ND LL + E +DAVE + L L+ L K N+
Sbjct: 449 LRNMRPNDGLLTTLVGGLCKEG-KHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 507
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
LL ++++ LD +T+I C + + VK + + Y L
Sbjct: 508 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQ 425
I + ++ + + E VY ++I A + K+F+ LL ++
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL 627
Query: 426 KCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ + Y LI Y G+ +A K++ M KGI P+ T++ L+ G+ +GR+ DA+
Sbjct: 628 ELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKC 687
Query: 485 YRKEKK 490
E +
Sbjct: 688 LIDEMR 693
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 188/480 (39%), Gaps = 84/480 (17%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G N + T +++ F + ++ + + E M +G +I+ +T+++HWL +
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ EM L+ P T + L + +A +++ ++++G N T L+
Sbjct: 439 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 498
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + G +EA+ + KM E G DK N LI CCK G+ E
Sbjct: 499 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV-----------EEGFK 547
Query: 239 LRYPVFKEALQ--TF----------KVADENDSL-LWQ-----------------VHPQF 268
LR + K+ ++ TF ++ ++++ LW +
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 607
Query: 269 SPEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ I + + + E +T ++E + L+ + N V L + K I +A
Sbjct: 608 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 667
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
S++I C+ R + A + K L Y ALIG KL KV +++EM
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 727
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
+ + + P TYT +I Y +G
Sbjct: 728 SS-----------------------------YDIHPNK----ITYTVMIDGYSKSGDMKT 754
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEE 506
A K+ M KGI P T+NVL G K G++ E+ D +S++ +P++E
Sbjct: 755 AAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKI--------EEGFKICDYMSQEGLPLDE 806
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 171/438 (39%), Gaps = 59/438 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T T +L +A + +VFE M++ G++ D +++ ++ G V+ A+ ++ +M
Sbjct: 214 TCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM 272
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +V+Y + L + + EA ++M++ G+ TY+VL+ L++ K+
Sbjct: 273 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 332
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA + + E G P++ N LI+ CK G + I M
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM--------------- 377
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
V +P ++ N SI QG K +
Sbjct: 378 ----------------VSKGINPNSVTLN--------------SIIQGFC----KIGQME 403
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ +L ++ + ++ +TII C + R + AL + ++ L+
Sbjct: 404 QAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLV 463
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
G L K E+ + + G + LIH L A ++ + E
Sbjct: 464 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 523
Query: 428 --TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
TY LI G ++ K+ M ++GI P T+N+L+ G+ ++G++ +A
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583
Query: 486 RKEKKSIQADALSKDAVP 503
E K S+D VP
Sbjct: 584 WNECK-------SRDLVP 594
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS+G TY++++ R+ K + + M+++G+ + V YT+++ G +
Sbjct: 658 RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQM 717
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D VN+ +EM + +P ++YT + + +K A + EM+ +G+ P+ TY VL
Sbjct: 718 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 777
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ GK EE +I M + G+ D+ L+
Sbjct: 778 TNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVH 814
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 89/175 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SR + +TY M+D + +A +I + +F + + + +++V Y +++ G+
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + ++M+ K PT +Y++ + + R+++A + EM + GL PN YT L
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 707
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ + G+ ++ + + +M + P+K ++I+ K+G+ +T +L M
Sbjct: 708 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 762
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 191/465 (41%), Gaps = 26/465 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + ++TM++ F R+ +F M++ G+ + VTY +++H L G +D A
Sbjct: 192 GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEA 251
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
E+M+ + P++V+Y + L +R EA + KEM RG PN Y L++
Sbjct: 252 FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDG 311
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
R G AL+I M G+ P+ CN LI+ CK+ + +L M +
Sbjct: 312 YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVIN 371
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI--EGPLSIDQGLVL 298
F + + DS L + F ++ + + + + G S L
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431
Query: 299 ILLKK---KNLVAIDSLLSGI----------------MDKSIQLDSAVISTIIEVNCDHR 339
LL+K N V ++L+ G+ +++ + LDS +T+I C
Sbjct: 432 RLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG 491
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ + E V+ + + Y L+ L + + + E K G+ Y
Sbjct: 492 KVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYG 551
Query: 400 LLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
++I A R K+F + + ++ Y LI Y G+ +A ++ M +
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
GI + T++ L+ GL +G V A E ++ + LS + V
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDE---MRKEGLSPNVV 653
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 166/417 (39%), Gaps = 51/417 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T +L +A + VF++M G+ D ++++++ G VD A+ ++ +M
Sbjct: 164 TCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKM 223
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +V+Y + L N R+ EA ++M + + P+ TY VL+ LV+ ++
Sbjct: 224 EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERF 283
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+EA I +M + G P+ N LI+ C+ G T + I M N +
Sbjct: 284 DEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGI---------- 333
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
SP ++ N S+ QG K +
Sbjct: 334 ---------------------SPNSVTCN--------------SLIQGYC----KSNQME 354
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ LL ++ ++ +++I C R D ALL + + L+
Sbjct: 355 HAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLV 414
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L + + E+ + + G + LIH L A AAK+ + E
Sbjct: 415 SGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLV 474
Query: 428 --TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ +Y LI G ++ K+ + M R+GI P + T+N+LL GL +G++ +A
Sbjct: 475 LDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEA 531
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 190/484 (39%), Gaps = 56/484 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG+ + Y T++D + IS+ + + M GI+ ++VT S++ + ++
Sbjct: 296 RGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEH 355
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EEM ++T+ + L L R A EM+ R PN T+L+
Sbjct: 356 AEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVS 415
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + GK EA+E++ ++ E G + N LI C+AG +L+ M E L L
Sbjct: 416 GLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVL 475
Query: 240 RYPVFKEAL----------QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
+ + + FK+ +E V P+ + N + +
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEE------MVRRGIQPDMYTYN----MLLHGLCNM 525
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
I++ L KKN D+ GIM I+ C R + F+
Sbjct: 526 GKIEEAGGLWHECKKNGNFPDAYTYGIM--------------IDGYCKANRVEEGEKLFQ 571
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG--- 406
V M + Y LI + + + ++M G + LIH L
Sbjct: 572 EMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631
Query: 407 ---SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
SA + + + L P YTALIG Y G K I + M +HP+
Sbjct: 632 LVDSANQLLDEMRKEGLSPN----VVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNK 687
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALSKDAVP--------MEE--KICDL 511
T+ +++ G KLG + A E +K I DA++ +A+ MEE K+CDL
Sbjct: 688 ITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDL 747
Query: 512 LYGG 515
+ G
Sbjct: 748 MSTG 751
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 179/451 (39%), Gaps = 29/451 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + + T +++ + ++ ++ +++ E M G I+ T+TSV+H L D
Sbjct: 330 SNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFD 389
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ EM L+ P T + L N + EA +++ ++++G N T L+
Sbjct: 390 SALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALI 449
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L AG EEA ++ +M E G+ D + N LI CCK G+ + M +
Sbjct: 450 HGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQ 509
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQV--HPQFSPEF--------------ISDNDAV 279
Y + L +E L + + F + + + + +
Sbjct: 510 PDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKL 569
Query: 280 --EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
E VT IE + L+ + N+ L + + I SA S++I +
Sbjct: 570 FQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSN 629
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
D A + K L+ Y ALIG KL KV I++EM+
Sbjct: 630 IGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKIT 689
Query: 398 GALLIH---RLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYK 452
++I+ +LG+ + AAK+ + + + TY AL + G ++ALK+
Sbjct: 690 YTIMINGHCKLGNMK---AAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCD 746
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
M GI T+ L+ G K VS E
Sbjct: 747 LMSTGGISLDDITYTTLIDGWHKPLTVSSRE 777
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 29 IKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI--- 82
I+ D YT N +L M E+A ++ ++ F D +TY M+D + +A R+
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNF-PDAYTYGIMIDGYCKANRVEEG 566
Query: 83 -----------------------------SSMKYVFEL---MQEKGINIDAVTYTSVMHW 110
+M+ F L M+ +GI + TY+S++H
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
LSN G VD A + +EM+ + P +V YTA + ++ + + +EM + PN
Sbjct: 627 LSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPN 686
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TYT+++ + G + A ++ ++M + G+ PD N L CK G+ + +
Sbjct: 687 KITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCD 746
Query: 231 YMKENRLAL 239
M ++L
Sbjct: 747 LMSTGGISL 755
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RSRG TY++++ + S + + M+++G++ + V YT+++ G +
Sbjct: 609 RSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQM 668
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+I +EM + +P ++YT + +K A + EM Q+G+ P+ TY L
Sbjct: 669 HKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNAL 728
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ GK EEAL++ M G+ D LI+
Sbjct: 729 TNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLID 765
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 199/476 (41%), Gaps = 49/476 (10%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V +VL+ + F+W+ R +G+ H FTY LD +A F+ MQ +
Sbjct: 8 VGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR 67
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G D TY+ V+ L AG++D A + +++ +++Y+ + RV +A
Sbjct: 68 GYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDA 127
Query: 156 TDVYKEMIQ-RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+++K M G P+ T+ L++ L + EA +F M +AG +P+ + + L++
Sbjct: 128 LEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLD 187
Query: 215 KCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSP 270
CKAG + M E + Y F L + +VA+ D V
Sbjct: 188 GLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG--- 244
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK------KNLVAIDSLLSGIMDKSIQLD 324
S DAV F T ++ IL KK +N + SG++D++ +
Sbjct: 245 ---SKADAVAFST------------VIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289
Query: 325 SAVIS-----------TIIEVNCDHRRRDGALLAFEYSVKMD-----LNLERTAYLALIG 368
+IS T+I C +R +L F+ M NLE Y ++
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE--TYNIMVD 347
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
L K + E+V EM G S V + L+ L + A + + ++
Sbjct: 348 NLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407
Query: 429 ATYT--ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++T +++ AG D AL +TM +G P L T+N LL GL K GR+ +A
Sbjct: 408 DSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEA 463
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 213/524 (40%), Gaps = 59/524 (11%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNH 64
+ K D A++LL L +K + T + V+ ++ A F +S G
Sbjct: 83 LCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVP 142
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++L +R+S +FE M + G + ++Y++++ L AG +D A +W
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV-------- 176
EEM K C P +V+YT+++ L +RV EA D ++M+ +G + ++
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262
Query: 177 ---------LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
++E+L R+G +EA + F +M P N LI CK+ +L
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
+ + MK + P L+T+ + +N Q+ ++A E V
Sbjct: 323 LFQRMKSMKEFYCPP----NLETYNIMVDNLCKAKQL-----------DEAQELVNEMAN 367
Query: 288 GPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
LS D LV L K L LL + + + DS ++I+ + D
Sbjct: 368 YGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDY 427
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
AL E + Y L+ L K + + +M A + V+ ++I
Sbjct: 428 ALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIIT 487
Query: 404 RLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT-MCR 456
L + + A IF +LP+ T Y +L+ G D AL++ KT +C+
Sbjct: 488 ALCRSGQAAGAHAIFQEMVKRGVLPD----TVLYHSLLDGLARNGLEDLALELLKTSLCK 543
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA--EIYRKEKKSIQADALS 498
P ++L GL K G+ DA + R ADA +
Sbjct: 544 ----PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFT 583
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 84/226 (37%), Gaps = 37/226 (16%)
Query: 11 ILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHD 65
+ K D A DLL+ + + DS+T +L K + + ++RG D
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
TY T+LD +A RI M D +YT ++ L +G GA I++
Sbjct: 444 LVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQ 503
Query: 126 EM--------------------------------KLKECYPTIVSYTAYMKILFLNDRVK 153
EM K C P V + + L + +
Sbjct: 504 EMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAE 563
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+A +V + M G P + +TY ++ L + GK ++A ++ E
Sbjct: 564 DACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASE 609
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 201/446 (45%), Gaps = 32/446 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA+ F++ + +++G ++ ++L+ + + + + +F E G+ + T+
Sbjct: 196 IEKAFEFYSEM-KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFN 253
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ WL G ++ A N+W+E+ K P +VSY + D + A VYKEM+
Sbjct: 254 TLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 313
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ET 222
G PN T+T+LM+ + G E A IF +M++A + P I+I+ CKAG E
Sbjct: 314 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG 373
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
R L +++ + + P + + F + + N +L V+ + I+ +
Sbjct: 374 RD--LFNKFVSQGFVPTCMP-YNTIIDGF-IKEGNINLASNVYREMCEVGITPSTVT--Y 427
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
T+ I+G K N+ LL+ + K +++D T+I+ C R
Sbjct: 428 TSLIDG-----------FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMK 476
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A L+ R Y ++I +N + ++ ++M G + LI
Sbjct: 477 SAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLI 536
Query: 403 HRLGSARRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
L + R + A+ I + +LP+D+ +T LI + G + A KI + M
Sbjct: 537 DGLLKSGRLLYASDIHTEMLSKGILPDDR----AHTVLINGLCNKGQFENARKILEDMNG 592
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
K + PS+ +N L+AG K G + +A
Sbjct: 593 KNMIPSVLIYNTLIAGHFKEGNLQEA 618
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 154/422 (36%), Gaps = 27/422 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FT ML + I + F + +G+ +D Y+ +H L + A
Sbjct: 35 GVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYA 94
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ EM+ P ++T+ + V EA + +M+ G N T LM+
Sbjct: 95 LSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKG 154
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
G AL + +++ E+G+ P+K ++LI+ CCK G MK +
Sbjct: 155 YCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSS 214
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
L+ + WQ F NDA+E + + + + L+ L
Sbjct: 215 VYSLNSILEGYLKCQS-----WQ------NAFTMFNDALE---SGLANVFTFNT-LLSWL 259
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K+ + +L ++ K I + + II +C + A ++ +
Sbjct: 260 CKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNA 319
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAG-----HSLGVYLGALLIHRLGSARRPVPAA 415
+ L+ K I M A +LG+ +I L A R
Sbjct: 320 VTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI-----IIKGLCKAGRSFEGR 374
Query: 416 KIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+F+ Y +I + G+ + A +Y+ MC GI PS T+ L+ G
Sbjct: 375 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 434
Query: 474 EK 475
K
Sbjct: 435 CK 436
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + +RF Y +M+ F + +++ M +GI D TYTS++ L +G +
Sbjct: 486 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 545
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +I EM K P ++T + L + + A + ++M + + P+ Y L
Sbjct: 546 LYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTL 605
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ + G +EA + +M + G+ PD +IL+
Sbjct: 606 IAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/494 (19%), Positives = 195/494 (39%), Gaps = 81/494 (16%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G+ T+T+++ + ++ + + M G +++ TS+M G++
Sbjct: 102 RAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNL 161
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ + E+ P V+Y+ + N +++A + Y EM +G+ + Y+ +
Sbjct: 162 RSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSI 221
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII----------- 226
+E ++ ++ A +F+ E+G+ + N L+ CK G+
Sbjct: 222 LEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 280
Query: 227 ---------LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
+IL + +++ + V+KE L F+P ++
Sbjct: 281 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDN----------------GFTPNAVTFTI 324
Query: 278 AVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ------------- 322
++ F DIE SI +K N++ D+ L GI+ K +
Sbjct: 325 LMDGYFKKGDIENAFSI-----FHRMKDANILPTDTTL-GIIIKGLCKAGRSFEGRDLFN 378
Query: 323 --LDSAVISTIIEVNC--DHRRRDG----ALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+ + T + N D ++G A + ++ + Y +LI K N
Sbjct: 379 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 438
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---- 430
+++ +M + G + + LI RR + +A LL E + +
Sbjct: 439 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGF-CKRRDMKSAH--ELLNELRGAGLSPNRF 495
Query: 431 -YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
Y ++I + + + ++A+ +YK M +GI L T+ L+ GL K GR+ +Y +
Sbjct: 496 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL----LYASD- 550
Query: 490 KSIQADALSKDAVP 503
I + LSK +P
Sbjct: 551 --IHTEMLSKGILP 562
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 68/364 (18%), Positives = 148/364 (40%), Gaps = 24/364 (6%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P+I + + + EA +++ +M+ G+ +C+T V++ ++ G EA +
Sbjct: 3 PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
F + + GV+ D+ A +I + C + + +LR M+ F + T V
Sbjct: 63 FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVI-TACV 121
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
+ N + ++ + V L++ L+ + NL + L+
Sbjct: 122 KEGNVAEALRLKD-------------DMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLV 168
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL--- 370
+ I + + + S +I+ C + + AFE+ +M R++ +L IL
Sbjct: 169 NEISESGLVPNKVTYSVLIDGCCKNGNIEK---AFEFYSEMKTKGIRSSVYSLNSILEGY 225
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCT 428
+K ++ + + ++G + V+ L+ L + A ++ +
Sbjct: 226 LKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNV 284
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
+Y +I + + + A K+YK M G P+ TF +L+ G K G + +A I+ +
Sbjct: 285 VSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR 344
Query: 488 EKKS 491
K +
Sbjct: 345 MKDA 348
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 201/446 (45%), Gaps = 32/446 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA+ F++ + +++G ++ ++L+ + + + + +F E G+ + T+
Sbjct: 314 IEKAFEFYSEM-KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFN 371
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ WL G ++ A N+W+E+ K P +VSY + D + A VYKEM+
Sbjct: 372 TLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 431
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ET 222
G PN T+T+LM+ + G E A IF +M++A + P I+I+ CKAG E
Sbjct: 432 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG 491
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
R L +++ + + P + + F + + N +L V+ + I+ +
Sbjct: 492 RD--LFNKFVSQGFVPTCMP-YNTIIDGF-IKEGNINLASNVYREMCEVGITPSTVT--Y 545
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
T+ I+G K N+ LL+ + K +++D T+I+ C R
Sbjct: 546 TSLIDG-----------FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMK 594
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A L+ R Y ++I +N + ++ ++M G + LI
Sbjct: 595 SAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLI 654
Query: 403 HRLGSARRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
L + R + A+ I + +LP+D+ +T LI + G + A KI + M
Sbjct: 655 DGLLKSGRLLYASDIHTEMLSKGILPDDR----AHTVLINGLCNKGQFENARKILEDMNG 710
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
K + PS+ +N L+AG K G + +A
Sbjct: 711 KNMIPSVLIYNTLIAGHFKEGNLQEA 736
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 145/394 (36%), Gaps = 27/394 (6%)
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F + +G+ +D Y+ +H L + A+++ EM+ P ++T+ +
Sbjct: 181 FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 240
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
V EA + +M+ G N T LM+ G AL + +++ E+G+ P+K
Sbjct: 241 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 300
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
++LI+ CCK G MK + L+ + WQ
Sbjct: 301 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS-----WQ----- 350
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
F NDA+E + + + + L+ L K+ + +L ++ K I +
Sbjct: 351 -NAFTMFNDALE---SGLANVFTFNT-LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSY 405
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ II +C + A ++ + + L+ K I M
Sbjct: 406 NNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKD 465
Query: 389 AG-----HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSA 441
A +LG+ +I L A R +F+ Y +I +
Sbjct: 466 ANILPTDTTLGI-----IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 520
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
G+ + A +Y+ MC GI PS T+ L+ G K
Sbjct: 521 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 554
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + +RF Y +M+ F + +++ M +GI D TYTS++ L +G +
Sbjct: 604 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 663
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +I EM K P ++T + L + + A + ++M + + P+ Y L
Sbjct: 664 LYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTL 723
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ + G +EA + +M + G+ PD +IL+
Sbjct: 724 IAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 95/494 (19%), Positives = 195/494 (39%), Gaps = 81/494 (16%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G+ T+T+++ + ++ + + M G +++ TS+M G++
Sbjct: 220 RAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNL 279
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ + E+ P V+Y+ + N +++A + Y EM +G+ + Y+ +
Sbjct: 280 RSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSI 339
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII----------- 226
+E ++ ++ A +F+ E+G+ + N L+ CK G+
Sbjct: 340 LEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGI 398
Query: 227 ---------LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
+IL + +++ + V+KE L F+P ++
Sbjct: 399 SPNVVSYNNIILGHCRKDNINAACKVYKEMLDN----------------GFTPNAVTFTI 442
Query: 278 AVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ------------- 322
++ F DIE SI +K N++ D+ L GI+ K +
Sbjct: 443 LMDGYFKKGDIENAFSI-----FHRMKDANILPTDTTL-GIIIKGLCKAGRSFEGRDLFN 496
Query: 323 --LDSAVISTIIEVNC--DHRRRDG----ALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+ + T + N D ++G A + ++ + Y +LI K N
Sbjct: 497 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 556
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---- 430
+++ +M + G + + LI RR + +A LL E + +
Sbjct: 557 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGF-CKRRDMKSAH--ELLNELRGAGLSPNRF 613
Query: 431 -YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
Y ++I + + + ++A+ +YK M +GI L T+ L+ GL K GR+ +Y +
Sbjct: 614 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL----LYASD- 668
Query: 490 KSIQADALSKDAVP 503
I + LSK +P
Sbjct: 669 --IHTEMLSKGILP 680
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 199/476 (41%), Gaps = 49/476 (10%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V +VL+ + F+W+ R +G+ H FTY LD +A F+ MQ +
Sbjct: 8 VGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR 67
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G D TY+ V+ L AG++D A + +++ +++Y+ + RV +A
Sbjct: 68 GYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDA 127
Query: 156 TDVYKEM-IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+++K M G P+ T+ L++ L + EA +F M +AG +P+ + + L++
Sbjct: 128 LEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLD 187
Query: 215 KCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSP 270
CKAG + M E + Y F L + +VA+ D V
Sbjct: 188 GLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG--- 244
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK------KNLVAIDSLLSGIMDKSIQLD 324
S DAV F T ++ IL KK +N + SG++D++ +
Sbjct: 245 ---SKADAVAFST------------VIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289
Query: 325 SAVIS-----------TIIEVNCDHRRRDGALLAFEYSVKMD-----LNLERTAYLALIG 368
+IS T+I C +R +L F+ M NLE Y ++
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLE--TYNIMVD 347
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
L K + E+V EM G S V + L+ L + A + + ++
Sbjct: 348 NLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407
Query: 429 ATYT--ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++T +++ AG D AL +TM +G P L T+N LL GL K GR+ +A
Sbjct: 408 DSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEA 463
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 213/524 (40%), Gaps = 59/524 (11%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNH 64
+ K D A++LL L +K + T + V+ ++ A F +S G
Sbjct: 83 LCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVP 142
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++L +R+S +FE M + G + ++Y++++ L AG +D A +W
Sbjct: 143 DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLW 202
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV-------- 176
EEM K C P +V+YT+++ L +RV EA D ++M+ +G + ++
Sbjct: 203 EEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK 262
Query: 177 ---------LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
++E+L R+G +EA + F +M P N LI CK+ +L
Sbjct: 263 GHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVL 322
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
+ + MK + P L+T+ + +N Q+ ++A E V
Sbjct: 323 LFQRMKSMKEFYCPP----NLETYNIMVDNLCKAKQL-----------DEAQELVNEMAN 367
Query: 288 GPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
LS D LV L K L LL + + + DS ++I+ + D
Sbjct: 368 YGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDY 427
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
AL E + Y L+ L K + + +M A + V+ ++I
Sbjct: 428 ALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIIT 487
Query: 404 RLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT-MCR 456
L + + A IF +LP+ T Y +L+ G D AL++ KT +C+
Sbjct: 488 ALCRSGQAAGAHAIFQEMVKRGVLPD----TVLYHSLLDGLARNGLEDLALELLKTSLCK 543
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA--EIYRKEKKSIQADALS 498
P +++ GL K G+ DA + R ADA +
Sbjct: 544 ----PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFT 583
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 84/226 (37%), Gaps = 37/226 (16%)
Query: 11 ILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHD 65
+ K D A DLL+ + + DS+T +L K + + ++RG D
Sbjct: 384 LCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
TY T+LD +A RI M D +YT ++ L +G GA I++
Sbjct: 444 LVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQ 503
Query: 126 EM--------------------------------KLKECYPTIVSYTAYMKILFLNDRVK 153
EM K C P V + + L + +
Sbjct: 504 EMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAE 563
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+A +V + M G P + +TY ++ L + GK ++A ++ E
Sbjct: 564 DACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASE 609
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 4 TISNVYKILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
++ Y L+ W + +L NL K D++ NQVLK A FF W+ R GF
Sbjct: 297 SVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAFQANQVLKLLHDHTVALGFFQWLKRQPGF 356
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
HD TYTTM+ I G+A++ +K + + M VTY ++H A + AV
Sbjct: 357 KHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVK 416
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++EEM+ P V+Y + I + A D+Y M + GL P+ +TY+ ++ L
Sbjct: 417 VFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLG 476
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---AL 239
+ G+ A ++F +M E G P+ NI+I KA ++ + + M+ +
Sbjct: 477 KGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKI 536
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
Y + E L DE +++ ++ ++P+
Sbjct: 537 TYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPD 568
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 34/206 (16%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ DR TY T++DI +A + ++ MQE G++ D TY+++++ L G + A
Sbjct: 425 GYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAA 484
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM C P +V+Y + + + +YK+M G P+ TY+++ME
Sbjct: 485 YKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEV 544
Query: 181 LVRAGKYEEALEIFSKMQ----------------------------------EAGVQPDK 206
L G +EA +F +M+ + G+QP+
Sbjct: 545 LGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNV 604
Query: 207 AACNILIEKCCKAGETRTIILILRYM 232
CN L+ K + ++L+ M
Sbjct: 605 PTCNSLLSAFLKMNRFQDAYIVLQNM 630
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ + +A+ ++ +++ MQ G D +TY+ VM L + G +D A ++ EM
Sbjct: 502 TYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM 561
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ ++ P Y + + V +A Y+ M+Q GL PN T L+ ++ ++
Sbjct: 562 R-RDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRF 620
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
++A + M G+ P +L+ C +A
Sbjct: 621 QDAYIVLQNMLAQGLVPSVQTYTLLLSCCTEA 652
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D+ TY+ ++++ G + + VF M+ + D Y ++ AG+VD A
Sbjct: 530 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYGLLVDLWGKAGNVDKA 588
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ M P + + + + +R ++A V + M+ +GL P+ TYT+L+
Sbjct: 589 LGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQGLVPSVQTYTLLLSC 648
Query: 181 LVRA 184
A
Sbjct: 649 CTEA 652
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +IGIL + F + ++++EM++A V +IH G A A K+F +
Sbjct: 363 YTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQ 422
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
E + TY LI ++ AG D A+ +Y M G+ P T++ ++ L K G+++
Sbjct: 423 EAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLA 482
Query: 481 DA 482
A
Sbjct: 483 AA 484
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I + K + V ++ ++M AG ++++ LG A +F +
Sbjct: 503 YNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 562
Query: 423 ED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
D Y L+ ++ AG+ DKAL Y+ M + G+ P++ T N LL+ K+ R D
Sbjct: 563 RDWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQD 622
Query: 482 AEI 484
A I
Sbjct: 623 AYI 625
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+ FE + +R Y LI I K ++ M + G S + + +++
Sbjct: 414 AVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVN 473
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LG + A K+F + E+ CT TY +I + A + + +K+YK M G
Sbjct: 474 CLGKGGQLAAAYKLFCEMIEN-GCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFR 532
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P T+++++ L G + +AE
Sbjct: 533 PDKITYSIVMEVLGHCGHLDEAE 555
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 193/457 (42%), Gaps = 26/457 (5%)
Query: 34 YTVNQVLKTHPPMEKAWLFFNWVSRSR--GFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
+ N++L M+K L + + + G +H+ +TY +++ F +IS +
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M + G VT +S+++ + + AV + ++M P +++T + LFL+++
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
EA + M+QRG PN TY V++ L + G + A + +KM+ A ++ + +
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 212 LIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQ 267
+I+ CK + + M+ + + Y L ++ + LL + +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+P ++ N L+ +K+ LV + L ++ +SI D
Sbjct: 326 INPNVVTFN------------------ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
S++I C H R D A FE + D Y LI K + E+ EM+
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
+ G LIH AR A +F + D TY L+ G +
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KA+ +++ + R + P++ T+N+++ G+ K G+V D
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I + T N ++ K +E L+ + RS +
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS--ID 362
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY+++++ F R+ K++FELM K + VTY ++++ A +D V +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+YT + F A V+K+M+ G+ PN TY L++ L +
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+A+ +F +Q + ++P NI+IE CKAG+
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 93/168 (55%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ F +AKRI +F M ++G+ + VTYT+++H A D D A ++++M
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+P I++Y + L N ++++A V++ + + + P YTY +++E + +AGK
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
E+ ++F + GV+PD N +I C+ G + R M+E+
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 79/149 (53%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TYTT++ F +A+ + + VF+ M G++ + +TY +++ L G ++
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++E ++ + PTI +Y ++ + +V++ D++ + +G+ P+ Y ++
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
R G EEA +F KM+E G PD
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/427 (18%), Positives = 155/427 (36%), Gaps = 60/427 (14%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D A+ ++ M P+I + + + + + ++M + G+ N YTY +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ R + AL + KM + G +P + L+ C + ++ M E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 237 L---ALRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFV---------- 282
+ + L A E +L+ V P ++ V +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 283 -------TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
IE + I ++ L K ++ +L + + +K ++ + S++I
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C++ R A ++ +N + ALI +K + ++ +EM K +
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---------------------------- 427
+ + LI+ R A +F L+ + C
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 428 ----------TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
T TYT LI +F A D A ++K M G+HP++ T+N LL GL K G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 478 RVSDAEI 484
++ A +
Sbjct: 485 KLEKAMV 491
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 155/365 (42%), Gaps = 32/365 (8%)
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
++ +A ++ M++ P+ + + L+ + + K++ + + KMQ G+ + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 211 ILIEKCCKAGE-TRTIILILRYMK---ENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
ILI C+ + + + L+ + MK E + + +++D + V
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 267 QFSPEFIS-------------DNDAVEFVTTDIE---GPLSIDQGLVLI-LLKKKNLVAI 309
+ P+ I+ ++AV V ++ P + G+V+ L K+ ++
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+LL+ + I+ + + ST+I+ C +R D AL F + Y +LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPE 423
L + + ++ +M + + V LI + V A K++ S+ P+
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA- 482
TY++LI + D+A +++ M K P++ T+N L+ G K R+ +
Sbjct: 365 ----IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 483 EIYRK 487
E++R+
Sbjct: 421 ELFRE 425
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 180/441 (40%), Gaps = 56/441 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY T++D ++ R+ +F M+ G + ++ +++ L +D A
Sbjct: 110 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 169
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM+ K+ P SY + L ++ EA +++ M+ G+ P+ TY V++
Sbjct: 170 CQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHG 229
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--- 237
+ A +EALE+F M+ G +P + NILI+ CK G+ +L+ M ++
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPD 289
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y L + D+ LL V Q P ++ N T I G
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN-------TLIHG-------- 334
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
L K + +L ++ D +T++ +C + + A V L
Sbjct: 335 ---LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y AL+ L K N P+ + +M +G + ++
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF-------------------- 431
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
TYTALI + SAG D LK++ M GI P + L A L K
Sbjct: 432 -------------TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKS 478
Query: 477 GRVSDA-EIYRKEKKSIQADA 496
GR + A EI R+ ++S++++A
Sbjct: 479 GRSARALEILREGRESLRSEA 499
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T T++ +A RI + V + M G + D VTY +++H AG + A + +M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +V+YTA + L +R+ EA V+ +M G PN +TYT L+ AG+
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ L++F +M AG+ PD L + CK+G + + ILR E R +LR + +
Sbjct: 447 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR---EGRESLRSEAWGDE 503
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISD 275
+ F V D LL + + F+ D
Sbjct: 504 VYRFAV----DGLLEAGKMEMALGFVRD 527
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 11/229 (4%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
+YT+++ L+ M RS+G RFT+ ++D + ++ + + M
Sbjct: 233 AYTLDEALELFKSM-----------RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRM 281
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ G D VTY++++ L + VD A ++ E+M ++C PT+V+ + L R+
Sbjct: 282 TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 341
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
KEA +V M+ G P+ TY L+ RAG+ E A E+ S M G+ P+ L
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ CKA + MK + A + + F A + D L
Sbjct: 402 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 177/418 (42%), Gaps = 31/418 (7%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M E+ ++ D+ +Y ++ L+ AG ++ A N+++++ P+ V+YT+ + L + +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+A +++ +M +RG PP+ TY V+++ + G EEA ++ KM E G PD N
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 212 LIEKCCKAGETRTIILILRYMKE-----NRLA--------LRYPVFKEALQTFKVADEN- 257
+++ CK+ +L+ M+ NR + + +A Q F +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 258 ---DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS--------IDQGLVLILLKKKNL 306
DS + + + N+A + ++ ++ + G+ L + L
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
S+ S K + + +I+ +C + D A + + Y L
Sbjct: 241 ELFKSMRS----KGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I L + ++E+M K V LIH L A R A ++ + +
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356
Query: 427 C--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY L+ + AG ++A ++ M +G+ P++ T+ L++GL K R+ +A
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + D TY T++ A + + + M +G+ + VTYT+++ L A +
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ +MK C P + +YTA + +V ++ EM+ G+ P+ Y L
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472
Query: 179 EYLVRAGKYEEALEIFSKMQEA 200
L ++G+ ALEI + +E+
Sbjct: 473 AELCKSGRSARALEILREGRES 494
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + TYT ++ +A R+ VF M+ G + TYT+++ +AG VD
Sbjct: 388 ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 447
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ--RGLPPNCYTYTV 176
G + ++ EM P V Y L + R A ++ +E + R Y
Sbjct: 448 GGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRF 507
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ L+ AGK E AL M G P C L+ CK+G+
Sbjct: 508 AVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 552
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 181/434 (41%), Gaps = 27/434 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAVNI 123
F+Y +L + R + +M + G D V+YT+V++ GD D A +
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + P +V+Y + + L + +A +V M++ G+ P+C TY ++
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
+G+ +EA+ KM+ GV+PD ++L++ CK G I M + L
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 244 FKEALQTFKVAD---ENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ LQ + E LL V P D+ + +DQ ++
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHP----DHYVFSILICAYANQGKVDQAML-- 392
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ S + + + ++ +I + C R + A+L FE + L+
Sbjct: 393 ------------VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y +LI L N + + E++ EM G L +I R + + K+F
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L+ + TY LI Y AG D+A+K+ M G+ P+ T++ L+ G K+
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 478 RVSDAEIYRKEKKS 491
R+ DA + KE +S
Sbjct: 561 RMEDALVLFKEMES 574
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 184/447 (41%), Gaps = 23/447 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY +++ +A+ + V M + G+ D +TY S++H ++G
Sbjct: 225 RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++M+ P +V+Y+ M L N R EA ++ M +RGL P TY L++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G E + M G+ PD +ILI G+ +L+ M++ L
Sbjct: 345 GYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNP 404
Query: 240 RYPVFKEALQTF-KVADENDSLLW---QVHPQFSPEFISDNDAVEFVTTDIEGPLS---- 291
+ + K D++L+ + SP I N + + T + +
Sbjct: 405 NAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 464
Query: 292 ---IDQGLVLILL----------KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+D+G+ L + K+ ++ + L ++ ++ + +T+I C
Sbjct: 465 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLA 524
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ D A+ V + L Y LI K++ + +EM +G S +
Sbjct: 525 GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
+++ L RR A +++ + E Q +TY ++ D AL++++ +C
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCL 644
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ TFN+++ L K+GR +A+
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAK 671
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A + F + S G + D TY +L + +R ++ K ++ + E G I+ TY
Sbjct: 562 MEDALVLFKEM-ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++H L D A+ +++ + L + ++ + L R EA D++
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN +TY ++ E ++ G EE ++F M++ G D N ++ + + GE
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Query: 226 ILILRYMKENRLAL 239
L + E +L
Sbjct: 741 GTYLSMIDEKHFSL 754
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 150/384 (39%), Gaps = 28/384 (7%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD-V 158
D TY ++ AG +D + K +++T +K L + R +A D V
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE---AGVQPDKAACNILIEK 215
+ M + G PN ++Y +L++ L + +EALE+ M + G PD + +I
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 216 CCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLL-WQVHPQFSPE 271
K G++ M + + + Y AL + D+ +L V P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
++ N + G S Q I KK + ++ D S +
Sbjct: 266 CMTYNSI-------LHGYCSSGQPKEAIGFLKK-----------MRSDGVEPDVVTYSLL 307
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ C + R A F+ K L E T Y L+ ++ +++ M + G
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
Y+ ++LI + + A +FS + + TY A+IG+ +G + A+
Sbjct: 368 HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGL 473
++ M +G+ P +N L+ GL
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGL 451
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 181/434 (41%), Gaps = 27/434 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAVNI 123
F+Y +L + R + +M + G D V+YT+V++ GD D A +
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + P +V+Y + + L + +A +V M++ G+ P+C TY ++
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
+G+ +EA+ KM+ GV+PD ++L++ CK G I M + L
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 244 FKEALQTFKVAD---ENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ LQ + E LL V P D+ + +DQ ++
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHP----DHYVFSILICAYAKQGKVDQAML-- 392
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ S + + + ++ +I + C R + A+L FE + L+
Sbjct: 393 ------------VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y +LI L N + + E++ EM G L +I R + + K+F
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L+ + TY LI Y AG D+A+K+ M G+ P+ T++ L+ G K+
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 478 RVSDAEIYRKEKKS 491
R+ DA + KE +S
Sbjct: 561 RMEDALVLFKEMES 574
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 185/447 (41%), Gaps = 23/447 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY +++ +A+ + V M + G+ D +TY S++H ++G
Sbjct: 225 RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++M+ P +V+Y+ M L N R EA ++ M +RGL P TY L++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQ 344
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G E + M G+ PD +ILI K G+ +L+ M++ L
Sbjct: 345 GYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 404
Query: 240 RYPVFKEALQTF-KVADENDSLLW---QVHPQFSPEFISDNDAVEFVTTDIEGPLS---- 291
+ + K D++L+ + SP I N + + T + +
Sbjct: 405 NAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 464
Query: 292 ---IDQGLVLILL----------KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+D+G+ L + K+ ++ + L ++ ++ + +T+I C
Sbjct: 465 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLA 524
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ D A+ V + L Y LI K++ + +EM +G S +
Sbjct: 525 GKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITY 584
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
+++ L RR A +++ + E Q +TY ++ D AL++++ +C
Sbjct: 585 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCL 644
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ TFN+++ L K+GR +A+
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAK 671
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A + F + S G + D TY +L + +R ++ K ++ + E G I+ TY
Sbjct: 562 MEDALVLFKEM-ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++H L D A+ +++ + L + ++ + L R EA D++
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN +TY ++ E ++ G EE ++F M++ G D N ++ + + GE
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Query: 226 ILILRYMKENRLAL 239
L + E +L
Sbjct: 741 GTYLSMIDEKHFSL 754
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 149/384 (38%), Gaps = 28/384 (7%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD-V 158
D TY ++ AG +D + K +++T +K L + R +A D V
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE---AGVQPDKAACNILIEK 215
+ M + G PN ++Y +L++ L + +EALE+ M + G PD + +I
Sbjct: 146 LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 216 CCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLL-WQVHPQFSPE 271
K G++ M + + + Y AL + D+ +L V P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
++ N + G S Q I KK + ++ D S +
Sbjct: 266 CMTYNSI-------LHGYCSSGQPKEAIGFLKK-----------MRSDGVEPDVVTYSLL 307
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ C + R A F+ K L E T Y L+ ++ +++ M + G
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
Y+ ++LI + A +FS + + TY A+IG+ +G + A+
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGL 473
++ M +G+ P +N L+ GL
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGL 451
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 193/465 (41%), Gaps = 58/465 (12%)
Query: 34 YTVNQVLKTHPPMEKAWLFFNWVSRSR--GFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
+ N++L M+K L + + + G +H+ +TY +++ F +IS +
Sbjct: 11 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 70
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M + G VT +S+++ + + AV + ++M P +++T + LFL+++
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
EA + M+QRG PN TY V++ L + G + A + +KM+ A ++ D N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 212 LIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTF-KVADENDSLLWQVHPQ 267
+I+ CK + + + M+ + + Y L ++ + +D + L + +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+P ++ N L+ +K+ V + L ++ +SI D
Sbjct: 251 INPNLVTFN------------------ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++I C H R D A FE+ V D + Y LI K E+ EM+
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
G L D T TYT LI F G D A
Sbjct: 353 HRG------------------------------LVGD---TVTYTTLIQGLFHDGDCDNA 379
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
K++K M G+ P + T+++LL GL G++ A E++ +KS
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I + T N ++ K +E L + + RS +
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS--ID 287
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY ++++ F R+ K +FE M K D TY +++ + V+ +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+YT ++ LF + A V+K+M+ G+PP+ TY++L++ L
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+ALE+F MQ++ ++ D +IE CKAG+
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 99/190 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ N + T+ ++D F + + + + + M ++ I+ D TY S+++ +D
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E M K+C+P + +Y +K + RV++ T++++EM RGL + TYT L++
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L G + A ++F +M GV PD +IL++ C G+ + + YM+++ + L
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 240 RYPVFKEALQ 249
++ ++
Sbjct: 429 DIYIYTTMIE 438
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 39/263 (14%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTY 69
K+ + D + I D +T N ++ H ++KA F ++ F D TY
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTY 328
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T++ F ++KR+ +F M +G+ D VTYT+++ L + GD D A ++++M
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDV---------------YKEMIQ---------- 164
P I++Y+ + L N ++++A +V Y MI+
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 165 ----------RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+G+ PN TY ++ L +EA + KM+E G PD N LI
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 215 KCCKAGETRTIILILRYMKENRL 237
+ G+ ++R M+ R
Sbjct: 509 AHLRDGDKAASAELIREMRSCRF 531
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY+ +LD ++ VF+ MQ+ I +D YT+++ + AG VD
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +V+Y + L ++EA + K+M + G P+ TY L+
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G + E+ +M+ C G+ TI L+ + + RL
Sbjct: 508 RAHLRDGDKAASAELIREMRS----------------CRFVGDASTIGLVANMLHDGRL 550
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 197/463 (42%), Gaps = 80/463 (17%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++D + + ++ M +GI DA+TY S++H L G ++ A +++ M
Sbjct: 235 TYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRM 294
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P +V+Y + L+ + V +A D EM+ +G+PP+ TYT ++ L G+
Sbjct: 295 EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQL 354
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA+ +F KM++ G +PD A N +I+ CK +RL
Sbjct: 355 NEAIRLFKKMEQKGCKPDVVAYNTIIDSLCK----------------DRLV--------- 389
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL-------VLIL 300
NDA+EF++ +D+G+ IL
Sbjct: 390 ----------------------------NDAMEFLSE------MVDRGIPPNAVTYSTIL 415
Query: 301 LKKKNLVAID---SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
NL +D L ++ +++ ++ S +++ C A FE + +
Sbjct: 416 HGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVE 475
Query: 358 LERTAYLALIG---ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
Y AL+ + K+N KV EI M G + ++ +LI+ ++RR A
Sbjct: 476 PNIYTYNALMNGYCLRCKMNEARKVFEI---MVGKGCAPDLHSYNILINGYCNSRRMDKA 532
Query: 415 AKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ + + + T TY ++ G A +++K MC G+ P+L T+++LL G
Sbjct: 533 KALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNG 592
Query: 473 LEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGG 515
L K G + +A K KS++ L D + I + GG
Sbjct: 593 LCKHGHLDEA---LKLFKSMKEKKLEPDIILYTILIEGMFIGG 632
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 200/458 (43%), Gaps = 38/458 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G H ++ +++ + V+ M + GI D +T+T++++ + N G + A
Sbjct: 123 GVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVA 182
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++ EM P ++SY + L + A V+K+M Q G PN TY +++
Sbjct: 183 VELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS 242
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--- 237
L + +A++ S+M G+ PD N ++ C G+ + + M++N
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ Y + ++L ++ ++ L ++ Q P D V + TT + G + Q
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPP-----DVVTY-TTILHGLCYLGQLNE 356
Query: 298 LILLKKK--------NLVA----IDSL------------LSGIMDKSIQLDSAVISTIIE 333
I L KK ++VA IDSL LS ++D+ I ++ STI+
Sbjct: 357 AIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILH 416
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C+ + D A F+ V ++ + L+ L + + + E MT+ G
Sbjct: 417 GFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEP 476
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKI 450
+Y L++ + A K+F ++ + C +Y LI Y ++ DKA +
Sbjct: 477 NIYTYNALMNGYCLRCKMNEARKVFEIM-VGKGCAPDLHSYNILINGYCNSRRMDKAKAL 535
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
M K + P+ T+N ++ GL +GR+ DA E+++K
Sbjct: 536 LTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKK 573
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y T++D + + ++ M ++GI +AVTY++++H N G +D
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++EM + P ++++ + L V EA V++ M ++G+ PN YTY LM
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
K EA ++F M G PD + NILI C +
Sbjct: 487 GYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNS 526
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E W+F + G + +TY +++ + +++ + VFE+M KG D +Y
Sbjct: 461 EARWVFETMTEK--GVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNI 518
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+++ N+ +D A + +M +K+ P V+Y MK L R+ +A +++K+M G
Sbjct: 519 LINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSG 578
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ P TY++L+ L + G +EAL++F M+E ++PD ILIE
Sbjct: 579 MLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIE 626
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E LF V R+ N T++ ++D + +S ++VFE M EKG+ + TY +
Sbjct: 426 EATQLFKEMVGRNVMPN--TLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M+ ++ A ++E M K C P + SY + + R+ +A + +M +
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L PN TY +M+ L G+ +A E+F KM +G+ P +IL+ CK G +
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603
Query: 227 LILRYMKENRL 237
+ + MKE +L
Sbjct: 604 KLFKSMKEKKL 614
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 185/454 (40%), Gaps = 57/454 (12%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG D TY +++ +++ +F+ M++ G D VTY ++ L V+
Sbjct: 261 GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN 320
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EM + P +V+YT + L ++ EA ++K+M Q+G P+ Y ++
Sbjct: 321 DAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTII 380
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L + +A+E S+M + G+ P+ + ++ C G+
Sbjct: 381 DSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ----------------- 423
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
EA Q FK V P ++ + V+ + EG +S + +
Sbjct: 424 -----LDEATQLFK---------EMVGRNVMPNTLTFSILVDGLCQ--EGMVSEARWVFE 467
Query: 299 ILLKK---KNLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCDHR 339
+ +K N+ ++L++G ++ K D + +I C+ R
Sbjct: 468 TMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSR 527
Query: 340 RRDGA-LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R D A L + SVK L Y ++ L + E+ ++M +G +
Sbjct: 528 RMDKAKALLTQMSVK-KLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTY 586
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
++L++ L A K+F + E + YT LI F G + A ++ +
Sbjct: 587 SILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSA 646
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK 489
GI P T+NV++ GL K G +A E++RK K
Sbjct: 647 DGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWK 680
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 157/424 (37%), Gaps = 68/424 (16%)
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
SN VD A+ + M P+IV + ++ + + + +M G+
Sbjct: 69 SNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTV 128
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD--------KAAC-------------- 209
Y+ +L+ L R + A+ ++ KM + G+QPD C
Sbjct: 129 YSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNE 188
Query: 210 -------------NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK---- 252
N LI C +G T + + + M++N + + +
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRL 248
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVE--------------FVTTDIEG--PLSIDQGL 296
V D D L V P+ I+ N V F + G P + +
Sbjct: 249 VNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNI 308
Query: 297 VLILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++ L K LV A D LS ++D+ I D +TI+ C + + A+ F+ +
Sbjct: 309 IIDSLYKDRLVNDAAD-FLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ AY +I L K E + EM G + ++H + + A
Sbjct: 368 GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEA 427
Query: 415 AKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
++F +++P T T++ L+ G +A +++TM KG+ P++ T+N
Sbjct: 428 TQLFKEMVGRNVMPN----TLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 469 LLAG 472
L+ G
Sbjct: 484 LMNG 487
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/523 (22%), Positives = 220/523 (42%), Gaps = 31/523 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L ++ D + V +V+KT + FF W ++ R + HD T
Sbjct: 66 RILKIFKWGPDAERALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTST 125
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ ++ M K + E+++ + + + V+ L NA + A+ I+ ++
Sbjct: 126 YMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQI 185
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K ++C PT +Y + + +L + ++ ++Y EM G P+ TY+ L+ + G+
Sbjct: 186 KARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGR 245
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI---LRYMKENRLALRYPV 243
+ A+ + ++M+E G+QP ++I K + + +RYM Y
Sbjct: 246 QDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTE 305
Query: 244 FKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEF------------------VTT 284
L DE ++ + P+ + N+ + F V+
Sbjct: 306 LIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSH 365
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
I ++ + + + K + + S + I S +I+ C R + A
Sbjct: 366 CIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKA 425
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
++ E + AY +LI L K + E+ +E+ + S + A++I
Sbjct: 426 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 485
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LG A R A +F + + CT Y AL+ A D+AL + M G P
Sbjct: 486 LGKAGRLDDAINLFDEMSK-LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLP 544
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ ++N++L GL K G A E+ K S I+ DA+S + V
Sbjct: 545 DINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTV 587
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 53 FNWVSRSRG--FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
F+W R +G + FTY+ ++D F + RI + E M EKG Y S++
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L A D A +++E+K + Y +K L R+ +A +++ EM + G PN
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPN 510
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
Y Y LM L RA +EAL KMQE G PD + NI++ K G + +L
Sbjct: 511 VYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLT 570
Query: 231 YMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVH 265
MK + + A+ Y AL + +E L+ +++
Sbjct: 571 NMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMN 608
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA + + +GF Y +++D G+AKR +F+ ++E + A Y
Sbjct: 422 IEKAMMLLEEMD-EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L AG +D A+N+++EM C P + +Y A M L + EA ++M +
Sbjct: 481 VMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEH 540
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G P+ +Y +++ L + G A+E+ + M+ + ++PD + N ++ AG
Sbjct: 541 GCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAG 595
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSL-GVYLGALLIHRLGSARRPVPAAKIFSL 420
AY ++I +LI + KV E+ EM+ GH + LI R A ++ +
Sbjct: 196 AYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNE 255
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ E+ Q YT +I ++F + AL +++ M P + T+ L+ GL K GR
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGR 315
Query: 479 VSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
+ +A + E +Q + D V M I
Sbjct: 316 IDEAYHFYHE---MQREGCKPDTVVMNNMI 342
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 48/119 (40%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + Y ++ A + MQE G D +Y +++ L+ G A
Sbjct: 506 GCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRA 565
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + MK P VSY + L +EA ++ KEM G + TY+ ++E
Sbjct: 566 MEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 4/271 (1%)
Query: 5 ISNVYKILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y L+ W + +L +L K D++ NQVLK A FF+W+ R GF
Sbjct: 302 VEQYYHTLQQMKWGPMTEHVLDSLHCKIDAFQANQVLKLLHDHTMALGFFHWLKRQPGFK 361
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
HD TYTTM+ I G+A++ M+ + M VTY ++H A + AV +
Sbjct: 362 HDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKV 421
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+EEM+ P V+Y + I ++ A D+Y M + GL P+ +TY+ ++ L +
Sbjct: 422 FEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGK 481
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALR 240
G+ A ++F +M E G P+ NI+I KA ++ + R M+ +
Sbjct: 482 GGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKIT 541
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
Y + E L DE +++ ++ ++P+
Sbjct: 542 YSIVMEVLGHCGHLDEAEAVFIEMRRDWAPD 572
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY+ M++ G+ ++++ +F M E G + VTY ++ + A + D
Sbjct: 464 GLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNV 523
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++ +M++ P ++Y+ M++L + EA V+ EM +R P+ Y +L++
Sbjct: 524 VKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDWAPDEPVYGLLVDL 582
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+AG ++AL + M + G+QP+ CN L+ K + +L+ M
Sbjct: 583 WGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNM 634
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D+ TY+ ++++ G + + VF M+ + D Y ++ AG+VD A
Sbjct: 534 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYGLLVDLWGKAGNVDKA 592
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + M P + + + + +R ++A V + M+ +GL P+ TYT+L+
Sbjct: 593 LGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLL 650
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I + K + V ++ +M AG ++++ LG A +F +
Sbjct: 507 YNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 566
Query: 423 ED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
D Y L+ ++ AG+ DKAL Y M + G+ P++ T N LL+ K+ R D
Sbjct: 567 RDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQD 626
Query: 482 A 482
A
Sbjct: 627 A 627
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+ FE + +R Y LI I K ++ M + G S + + +++
Sbjct: 418 AVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVN 477
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LG + A K+F + E+ CT TY +I + A + D +K+Y+ M G
Sbjct: 478 CLGKGGQLAAAYKLFCEMIEN-GCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFR 536
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P T+++++ L G + +AE
Sbjct: 537 PDKITYSIVMEVLGHCGHLDEAE 559
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 4/272 (1%)
Query: 4 TISNVYKILKYSTW-DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
++ Y L+ W +L NL K D++ NQVLK A FF W+ R GF
Sbjct: 303 SVEQYYHTLQQMKWVPMTGHVLDNLHCKIDAFQANQVLKLLHDHTIALGFFQWLKRQPGF 362
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
HD +YTTM+ I G+A++ +M+ + + M VTY ++H A + AV
Sbjct: 363 KHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVK 422
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++EEM+ P V+Y + I ++ A D+Y M + GL P+ +TY+ ++ L
Sbjct: 423 VFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLG 482
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---AL 239
+ G A ++F +M E G P+ NI+I KA ++ + + M+ +
Sbjct: 483 KGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKI 542
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
Y + E L DE +++ ++ ++P+
Sbjct: 543 TYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPD 574
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 34/206 (16%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ DR TY T++DI + + ++ MQE G++ D TY+++++ L G + A
Sbjct: 431 GYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAA 490
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM C P +V+Y + + + +YK+M G P+ TY+++ME
Sbjct: 491 YKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEV 550
Query: 181 LVRAGKYEEALEIFSKMQ----------------------------------EAGVQPDK 206
L G +EA +F +M+ + G+QP+
Sbjct: 551 LGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNV 610
Query: 207 AACNILIEKCCKAGETRTIILILRYM 232
CN L+ K + +L+ M
Sbjct: 611 PTCNSLLSAFLKINRFQDAYSVLQNM 636
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 34/193 (17%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY+ M++ G+ +++ +F M E G + VTY ++ + A + +
Sbjct: 466 GLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENV 525
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV---------------------- 158
V ++++M++ P ++Y+ M++L + EA V
Sbjct: 526 VKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLW 585
Query: 159 ------------YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
Y M+Q GL PN T L+ ++ ++++A + M G+ P
Sbjct: 586 GKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSL 645
Query: 207 AACNILIEKCCKA 219
+L+ C +A
Sbjct: 646 QTYTLLLSCCTEA 658
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I + K + V ++ ++M AG ++++ LG A +F +
Sbjct: 509 YNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 568
Query: 423 ED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
D Y L+ ++ AG+ DKAL Y M + G+ P++ T N LL+ K+ R D
Sbjct: 569 HDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQD 628
Query: 482 A 482
A
Sbjct: 629 A 629
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+ FE K +R Y LI I K ++ M + G S + + +++
Sbjct: 420 AVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVN 479
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LG A K+F + E+ CT TY +I + A + + +K+YK M G
Sbjct: 480 CLGKGGHLAAAYKLFCEMVEN-GCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFR 538
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P T+++++ L G + +AE
Sbjct: 539 PDKITYSIVMEVLGHCGHLDEAE 561
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+Y +IGIL + F + ++++EM V +IH G A A K+F
Sbjct: 368 SYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFE-- 425
Query: 422 PEDQKCT-----ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
E QK TY LI ++ G + A+ +Y M G+ P T++ ++ L K
Sbjct: 426 -EMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKG 484
Query: 477 GRVSDA 482
G ++ A
Sbjct: 485 GHLAAA 490
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/523 (22%), Positives = 220/523 (42%), Gaps = 31/523 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L ++ D + V +V+KT + FF W ++ R + HD T
Sbjct: 66 RILKIFKWGPDAERALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTST 125
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ ++ M K + E+++ + + + V+ L NA + A+ I+ ++
Sbjct: 126 YMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQI 185
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K ++C PT +Y + + +L + ++ ++Y EM G P+ TY+ L+ + G+
Sbjct: 186 KARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGR 245
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI---LRYMKENRLALRYPV 243
+ A+ + ++M+E G+QP ++I K + + +RYM Y
Sbjct: 246 QDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTE 305
Query: 244 FKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEF------------------VTT 284
L DE ++ + P+ + N+ + F V+
Sbjct: 306 LIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSH 365
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
I ++ + + + K + + S + I S +I+ C R + A
Sbjct: 366 CIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKA 425
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
++ E + AY +LI L K + E+ +E+ + S + A++I
Sbjct: 426 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 485
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LG A R A +F + + CT Y AL+ A D+AL + M G P
Sbjct: 486 LGKAGRLDDAINLFDEMSK-LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLP 544
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ ++N++L GL K G A E+ K S I+ DA+S + V
Sbjct: 545 DINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTV 587
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 53 FNWVSRSRG--FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
F+W R +G + FTY+ ++D F + RI + E M EKG Y S++
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L A D A +++E+K + Y +K L R+ +A +++ EM + G PN
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPN 510
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
Y Y LM L RA +EAL KMQE G PD + NI++ K G + +L
Sbjct: 511 VYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLT 570
Query: 231 YMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVH 265
MK + + A+ Y AL + +E L+ +++
Sbjct: 571 NMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMN 608
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA + + +GF Y +++D G+AKR +F+ ++E + A Y
Sbjct: 422 IEKAMMLLEEMD-EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L AG +D A+N+++EM C P + +Y A M L + EA ++M +
Sbjct: 481 VMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEH 540
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G P+ +Y +++ L + G A+E+ + M+ + ++PD + N ++ AG
Sbjct: 541 GCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAG 595
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSL-GVYLGALLIHRLGSARRPVPAAKIFSL 420
AY ++I +LI + KV E+ EM+ GH + LI R A ++ +
Sbjct: 196 AYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNE 255
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ E+ Q YT +I ++F + AL +++ M P + T+ L+ GL K GR
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGR 315
Query: 479 VSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
+ +A + E +Q + D V M I
Sbjct: 316 IDEAYHFYHE---MQREDCKPDTVVMNNMI 342
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 48/119 (40%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + Y ++ A + MQE G D +Y +++ L+ G A
Sbjct: 506 GCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRA 565
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + MK P VSY + L +EA ++ KEM G + TY+ ++E
Sbjct: 566 MEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 1/234 (0%)
Query: 3 DTISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
+ + +V IL+ W +A++ + L D+Y NQ+LK A FF W+ R
Sbjct: 315 NVVESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLPR 374
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F HD TYTTM+ + G AK+ +++ + + M + G + VTY ++H A + AV
Sbjct: 375 FRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAV 434
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
N++++M+ C P V+Y + I + + A +Y++M GL P+ +TY+V++ L
Sbjct: 435 NVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+AG A +F +M + G P+ NI+I KA + + R M+++
Sbjct: 495 GKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQS 548
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY T++DI ++ + ++E MQ+ G+ D TY+ +++ L AG ++ A
Sbjct: 444 GCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAA 503
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M + C P +V+Y + + + A +Y++M Q G P+ TY ++ME
Sbjct: 504 HRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEV 563
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G EEA IF +MQ+ PD+ +L++ K+G + M + L
Sbjct: 564 LGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPN 623
Query: 241 YPVFKEALQTF 251
P L F
Sbjct: 624 VPTCNSLLSAF 634
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ + +A+ ++ MQ+ G D VTY VM L + G ++ A I+ EM
Sbjct: 521 TYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEM 580
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ K P Y + + + V++A + Y M++ GL PN T L+ +R +
Sbjct: 581 QKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQL 640
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+A ++ M G++P +L+ CC +T + M+
Sbjct: 641 SDAYQLLQSMLTFGLKPSLQTYTLLLS-CCTDAQTNDMGFCCELMQ 685
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +IG+L + F + +++++M K G V +IH G A A +F +
Sbjct: 382 YTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQ 441
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
E + TY LI ++ +G D A+ +Y+ M G+ P T++V++ L K G ++
Sbjct: 442 EAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLN 501
Query: 481 DAE 483
A
Sbjct: 502 AAH 504
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
++ +L + K AI+ LL ++ Q + + II A+ F+ +
Sbjct: 385 MIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAG 444
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K + E+M AG + + +++I+ LG A A
Sbjct: 445 CEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAH 504
Query: 416 KIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++F + D+ C TY +I + A + + ALK+Y+ M + G P T+ +++
Sbjct: 505 RLFCRM-VDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEV 563
Query: 473 LEKLGRVSDAE 483
L G + +AE
Sbjct: 564 LGHCGFLEEAE 574
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D+ TY ++++ G + + +F MQ+K D Y ++ +G+V A
Sbjct: 549 GFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKA 608
Query: 121 VNIWEEM---KLKECYPTIVSY-TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ M LK PT S +A++++ L+D A + + M+ GL P+ TYT+
Sbjct: 609 WEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSD----AYQLLQSMLTFGLKPSLQTYTL 664
Query: 177 LMEYLVRA 184
L+ A
Sbjct: 665 LLSCCTDA 672
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 1/234 (0%)
Query: 3 DTISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
+ + +V IL+ W +A++ + L D+Y NQ+LK A FF W+ R
Sbjct: 315 NVVESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLPR 374
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F HD TYTTM+ + G AK+ +++ + + M + G + VTY ++H A + AV
Sbjct: 375 FRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAV 434
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
N++++M+ C P V+Y + I + + A +Y++M GL P+ +TY+V++ L
Sbjct: 435 NVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+AG A +F +M + G P+ NI+I KA + + R M+++
Sbjct: 495 GKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQS 548
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY T++DI ++ + ++E MQ+ G+ D TY+ +++ L AG ++ A
Sbjct: 444 GCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAA 503
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M + C P +V+Y + + + A +Y++M Q G P+ TY ++ME
Sbjct: 504 HRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEV 563
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G EEA IF +MQ+ PD+ +L++ K+G + M + L
Sbjct: 564 LGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPN 623
Query: 241 YPVFKEALQTF 251
P L F
Sbjct: 624 VPTCNSLLSAF 634
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ + +A+ ++ MQ+ G D VTY VM L + G ++ A I+ EM
Sbjct: 521 TYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEM 580
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ K P Y + + + V++A + Y M++ GL PN T L+ +R +
Sbjct: 581 QKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQL 640
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+A ++ M G++P +L+ CC +T + M+
Sbjct: 641 SDAYQLLQSMLTFGLKPSLQTYTLLLS-CCTDAQTNDMGFCCELMQ 685
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +IG+L + F + +++++M K G V +IH G A A +F +
Sbjct: 382 YTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQ 441
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
E + TY LI ++ +G D A+ +Y+ M G+ P T++V++ L K G ++
Sbjct: 442 EAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLN 501
Query: 481 DAE 483
A
Sbjct: 502 AAH 504
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
++ +L + K AI+ LL ++ Q + + II A+ F+ +
Sbjct: 385 MIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAG 444
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+R Y LI I K + E+M AG + + +++I+ LG A A
Sbjct: 445 CEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAH 504
Query: 416 KIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++F + D+ C TY +I + A + + ALK+Y+ M + G P T+ +++
Sbjct: 505 RLFCRM-VDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEV 563
Query: 473 LEKLGRVSDAE 483
L G + +AE
Sbjct: 564 LGHCGFLEEAE 574
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D+ TY ++++ G + + +F MQ+K D Y ++ +G+V A
Sbjct: 549 GFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKA 608
Query: 121 VNIWEEM---KLKECYPTIVSY-TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ M LK PT S +A++++ L+D A + + M+ GL P+ TYT+
Sbjct: 609 WEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSD----AYQLLQSMLTFGLKPSLQTYTL 664
Query: 177 LMEYLVRA 184
L+ A
Sbjct: 665 LLSCCTDA 672
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 224/522 (42%), Gaps = 30/522 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L +K D V +VLK + FF W + R F HD T
Sbjct: 68 RILKIFKWGPDAEKALEVLKLKLDIRLVREVLKIDVEVHVKIQFFKWAGKKRNFEHDSTT 127
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ E + + + + M + I + ++ L V+ A++I+ ++K
Sbjct: 128 YMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVK 187
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKY 187
++C PT +Y + + +L ++ ++Y EM G P+ TY+ L+ + +
Sbjct: 188 GRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRD 247
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ A+ +F +M+E G+QP L+ K G+ + ++ M+ R + E
Sbjct: 248 DSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTEL 307
Query: 248 LQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK- 302
++ +V D + P+ + N+ + + +++ + LL
Sbjct: 308 IRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNC 367
Query: 303 KKNLVAIDSLLSGIMD------------KSIQLDSAVIST-----IIEVNCDHRRRDGAL 345
N+V ++++ + + + ++ D V S+ +I+ C R + AL
Sbjct: 368 TPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKAL 427
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
L E + AY +LI L K + E+ +E+ + S V + A++I
Sbjct: 428 LLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHF 487
Query: 406 GSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
G R A +F+ + + C Y ALI A D+A +++TM G +P
Sbjct: 488 GKCGRFNEAMGLFNEM-KKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPD 546
Query: 463 LGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ + N++L GL + G A E++ K K S I+ DA+S + V
Sbjct: 547 INSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTV 588
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA L + +GF Y ++++ G+AKR + +F+ ++E + Y
Sbjct: 423 VEKALLLLEEMD-EKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYA 481
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ G + A+ ++ EMK C P + +Y A + + D + EA +++ M +
Sbjct: 482 VMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEEN 541
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ ++ +++ L R G + A+E+F+KM+ + ++PD + N ++ +AG
Sbjct: 542 GCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEA 601
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
+++ M + L+ DE+ ++
Sbjct: 602 TKLMKEMNSKGFEYDLITYSSILEAVGKVDEDRNM 636
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 193/451 (42%), Gaps = 56/451 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE-KG-INIDAVTYTSVMHWLSNAGDVD 118
G D F+YT +L + K + +M + KG +D V YT+V++ L G +D
Sbjct: 165 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 224
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++++ M + P +V+Y++ + L + +AT V+ M++ G+ P+C YT L+
Sbjct: 225 KAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLV 284
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+GK +EA+ IF KM GV+PD L++ CK G++
Sbjct: 285 HGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS---------------- 328
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
EA + F DSL+ + H P+ + + T EG L L+
Sbjct: 329 ------TEARKIF------DSLVKRGH---KPDSTTYGTLLHGYAT--EGALVEMHDLLD 371
Query: 299 ILLKKKNLVA--IDSLLSGIMDKSIQLDSAVI-----------------STIIEVNCDHR 339
+++KK + I +++ G K ++D A++ T++++ C
Sbjct: 372 LMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAG 431
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R D AL F L + LI L + + KV E+ EM G L
Sbjct: 432 RVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFN 491
Query: 400 LLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
++ L R + A +F L+ + T TY LI Y G D+A+K+ M
Sbjct: 492 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFN 551
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G+ PS T+N ++ G + GR+ D +E
Sbjct: 552 GVKPSDVTYNTIINGYSQNGRIEDGLTLLRE 582
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 193/461 (41%), Gaps = 52/461 (11%)
Query: 28 PIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
P+ +YT +N +L+ ++KA+ F+ + RG + D TY++++ + + +
Sbjct: 204 PLDVVAYTTVINGLLR-EGQLDKAYSLFDAM-LDRGPSPDVVTYSSIISALSKTQAMDKA 261
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
VF M + G+ D + YTS++H ++G A+ I+++M P +V+YTA M
Sbjct: 262 TQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDY 321
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L N + EA ++ +++RG P+ TY L+ G E ++ M + G+Q
Sbjct: 322 LCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLG 381
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
N+++ K + +L+ M++ L + L A D L Q +
Sbjct: 382 HHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFN 441
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
E ++ N V TT I G + D+ ++ L ++D+ I LD+
Sbjct: 442 -SLKSEGLAPNIVV--FTTLIHGLCTCDK-----------WDKVEELAFEMIDRGICLDT 487
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ I+ C R A F+ V+ IGI NT+ + +
Sbjct: 488 IFFNAIMGNLCKKGRVIEAKNLFDLMVR-------------IGIEPNTNTYNTLID---- 530
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
G L ++ A + + + P D TY +I Y G +
Sbjct: 531 ------------GYCLDGKMDEAMKLLGVMVFNGVKPSD----VTYNTIINGYSQNGRIE 574
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR-VSDAEIY 485
L + + M KG++P + T+ +LL GL + GR V+ E+Y
Sbjct: 575 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELY 615
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D + ++ + R+ K +F+LM GI + TY +++ G +D
Sbjct: 481 RGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDE 540
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + M P+ V+Y + N R+++ + +EM +G+ P TY +L++
Sbjct: 541 AMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQ 600
Query: 180 YLVRAGKYEEALEIFSKM 197
L +AG+ A E++ +M
Sbjct: 601 GLFQAGRTVAAKELYLRM 618
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + TY T++D + ++ + +M G+ VTY ++++ S G ++
Sbjct: 517 GIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDG 576
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+ + EM K P IV+Y ++ LF R A ++Y MI+
Sbjct: 577 LTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 186/429 (43%), Gaps = 20/429 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF D TY+T++ + +++ + E M EKG+N D TYT ++ L AG VD
Sbjct: 4 KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDE 63
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ +M + C V+Y A + L ++ ++ A + +EM +G P+ TY ++
Sbjct: 64 ADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILS 123
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK--ENRL 237
L R GK EA + F M G PD A N L++ K G+ + + M + ++
Sbjct: 124 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKV 183
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
A + + F ++ D + + ++ D VT + ++
Sbjct: 184 APDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDT-----VTYN---------SIL 229
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L L +K N+ + + ++D + A S ++ +C L +E + +
Sbjct: 230 LGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFS 289
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ A+I +L K +++EEM+K G V +L+ L A ++
Sbjct: 290 PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL 349
Query: 418 FSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
FS + D C +Y+ ++ A ++ M + + P + TFN+L+ GL
Sbjct: 350 FSTMV-DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 408
Query: 475 KLGRVSDAE 483
K G++ +A+
Sbjct: 409 KAGKLDEAK 417
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/508 (21%), Positives = 201/508 (39%), Gaps = 81/508 (15%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+ ++ S+G+ D TY T+L ++S K F+ M +G + D V Y
Sbjct: 96 IERAYKLLEEMA-SKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN 154
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKL--KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
++ L G V A +++ M + ++ P +++Y + ++ EA ++K++I
Sbjct: 155 GLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVI 214
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+G P+ TY ++ L R +EA E+F KM ++G P+ A +I++ C+ G
Sbjct: 215 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMA 274
Query: 224 TIILILRYMKENRLA----LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
+ + M E R + L V + KV D + L P+ ++ N
Sbjct: 275 RCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYN--- 331
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLV-AIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
++L L K NLV L S ++D D S ++ C
Sbjct: 332 ----------------ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 375
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ A + F+ ++ L + + L+ L K + ++++ M++
Sbjct: 376 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTC 435
Query: 399 ALLIHRLGSARRPVPAAKIF------------------------------------SLLP 422
L+H L +R A ++F S++
Sbjct: 436 TTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVK 495
Query: 423 EDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
D + + TYT L+ AG D+A+ ++ M G P +N L+ GL K GR
Sbjct: 496 SDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGR- 554
Query: 480 SDAEIYRKEKKSIQADALSKDAVPMEEK 507
IQAD L++ M+EK
Sbjct: 555 -----------HIQADRLTQ---AMKEK 568
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 10/243 (4%)
Query: 1 MRDTI---SNVYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWL 51
M DT+ S + + + S D A+++ K + + T + VL H M +
Sbjct: 219 MPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLE 278
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+ ++ R F+ D ++D+ +AK++ V E M + G D VTY ++ L
Sbjct: 279 LYEEMTEKR-FSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGL 337
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
VD A ++ M C P IVSY+ + L ++V +A ++ MI+R L P+
Sbjct: 338 CKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDV 397
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
T+ +LM+ L +AGK +EA ++ M E V PD C L+ C+ T + + +Y
Sbjct: 398 VTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQY 457
Query: 232 MKE 234
M E
Sbjct: 458 MVE 460
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 170/418 (40%), Gaps = 60/418 (14%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M EKG D VTY++++ L G V A+ + EEM K P + +YT + L +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V EA +++ +MI+RG N Y L+ L + E A ++ +M G +PD N
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 212 LIEKCCKAGETRTIILILRYM--------------------KENRLALRYPVFKEALQTF 251
++ C+ G+ M KE ++A + +FK T
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFK----TM 176
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
+AD + +P+ I+ N T I+G +++ + L K D
Sbjct: 177 DMADR----------KVAPDLITYN-------TLIDGFCRVEKTDEAMKLFK------DV 213
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+ G M ++ +S ++ + N D F+ V Y ++
Sbjct: 214 IAKGYMPDTVTYNSILLGLARKSNMDEAEE-----MFKKMVDSGCAPNGATYSIVLSGHC 268
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA-- 429
++ + E+ EEMT+ S V L +I L A++ A K+ L E K A
Sbjct: 269 RVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKV---LEEMSKIGAVP 325
Query: 430 ---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY L+ DKA +++ TM G P + +++V+L GL K +V DA +
Sbjct: 326 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 383
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 9/170 (5%)
Query: 11 ILKYSTWDSAQDLL------KNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
+ K D A+DLL LP T+ L ++A F ++ +G
Sbjct: 407 LCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVE-KGTVA 465
Query: 65 DRFTYTTML-DIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVN 122
D + +L + E K ++ + +++ G + D VTYT++++ L AG VD AV+
Sbjct: 466 DVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVD 525
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+++M C P V+Y M L R +A + + M ++G +C+
Sbjct: 526 YFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 193/451 (42%), Gaps = 56/451 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE-KG-INIDAVTYTSVMHWLSNAGDVD 118
G D F+YT +L + K + +M + KG +D V YT+V++ L G +D
Sbjct: 166 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLD 225
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++++ M + P +V+Y++ + L + +AT V+ M++ G+ P+C YT L+
Sbjct: 226 KAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLV 285
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+GK +EA+ IF KM GV+PD L++ CK G++
Sbjct: 286 HGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS---------------- 329
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
EA + F DSL+ + H P+ + + T EG L L+
Sbjct: 330 ------TEARKIF------DSLVKRGH---KPDSTTYGTLLHGYAT--EGALVEMHDLLD 372
Query: 299 ILLKKKNLVA--IDSLLSGIMDKSIQLDSAVI-----------------STIIEVNCDHR 339
+++KK + I +++ G K ++D A++ T++++ C
Sbjct: 373 LMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAG 432
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R D AL F L + LI L + + KV E+ EM G L
Sbjct: 433 RVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFN 492
Query: 400 LLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
++ L R + A +F L+ + T TY LI Y G D+A+K+ M
Sbjct: 493 AIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFN 552
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G+ PS T+N ++ G + GR+ D +E
Sbjct: 553 GVKPSDVTYNTIINGYSQNGRIEDGLTLLRE 583
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 193/461 (41%), Gaps = 52/461 (11%)
Query: 28 PIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
P+ +YT +N +L+ ++KA+ F+ + RG + D TY++++ + + +
Sbjct: 205 PLDVVAYTTVINGLLR-EGQLDKAYSLFDAM-LDRGPSPDVVTYSSIISALSKTQAMDKA 262
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
VF M + G+ D + YTS++H ++G A+ I+++M P +V+YTA M
Sbjct: 263 TQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDY 322
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L N + EA ++ +++RG P+ TY L+ G E ++ M + G+Q
Sbjct: 323 LCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLG 382
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
N+++ K + +L+ M++ L + L A D L Q +
Sbjct: 383 HHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFN 442
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
E ++ N V TT I G + D+ ++ L ++D+ I LD+
Sbjct: 443 -SLKSEGLAPNIVV--FTTLIHGLCTCDK-----------WDKVEELAFEMIDRGICLDT 488
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ I+ C R A F+ V+ IGI NT+ + +
Sbjct: 489 IFFNAIMGNLCKKGRVIEAKNLFDLMVR-------------IGIEPNTNTYNTLID---- 531
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
G L ++ A + + + P D TY +I Y G +
Sbjct: 532 ------------GYCLDGKMDEAMKLLGVMVFNGVKPSD----VTYNTIINGYSQNGRIE 575
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR-VSDAEIY 485
L + + M KG++P + T+ +LL GL + GR V+ E+Y
Sbjct: 576 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELY 616
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D + ++ + R+ K +F+LM GI + TY +++ G +D
Sbjct: 482 RGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDE 541
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + M P+ V+Y + N R+++ + +EM +G+ P TY +L++
Sbjct: 542 AMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQ 601
Query: 180 YLVRAGKYEEALEIFSKM 197
L +AG+ A E++ +M
Sbjct: 602 GLFQAGRTVAAKELYLRM 619
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + TY T++D + ++ + +M G+ VTY ++++ S G ++
Sbjct: 518 GIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDG 577
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+ + EM K P IV+Y ++ LF R A ++Y MI+
Sbjct: 578 LTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 179/417 (42%), Gaps = 51/417 (12%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF D+FTY T+++ + V + M G++ D TY S++ L G+++
Sbjct: 301 SEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIE 360
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV I ++M ++C P V+Y A + L +RV EAT++ + + +G+ P+ T+ L+
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLI 420
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L + ++ A+++F +M+ G +PD+ N+LI+ C + + + +L+ M+ N A
Sbjct: 421 QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCA 480
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
++ + F
Sbjct: 481 RNVVIYNTLIDGF----------------------------------------------- 493
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
K K + + + + + + DS +T+I+ C +R + A + + L
Sbjct: 494 --CKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
++ Y +L+ K K A+IV+ MT +G + + A LI L A R A+++
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611
Query: 419 -SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
S+ + T Y +I F +A+++++ M K P T+ ++ GL
Sbjct: 612 RSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGL 668
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 184/451 (40%), Gaps = 41/451 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R HD T+ ++ +A ++ + E M G++ D T+T++M G++DG
Sbjct: 197 RRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDG 256
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I E+M C T V+ + R+ +A +E + G P+ +TY L+
Sbjct: 257 ALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVN 316
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
L + G + A+E+ M G+ PD N LI CK GE + IL M
Sbjct: 317 GLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSP 376
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
A+ Y +L DE + + + P+ + N S+ QG
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFN--------------SLIQG 422
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L L N + L + K + D + +I+ C R+ + AL + +M+
Sbjct: 423 LCL----SSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLK---EME 475
Query: 356 LN-LERTA--YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
LN R Y LI K + EI +EM G S LI L ++R
Sbjct: 476 LNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVE 535
Query: 413 PAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
AA++ L P+ TY +L+ + G KA I +TM G +P + T+
Sbjct: 536 DAAQLMDQMIMEGLRPD----KFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTY 591
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKSIQADAL 497
L++GL K GRV ++ + +SIQ +
Sbjct: 592 ATLISGLCKAGRV---QVASRLLRSIQMKGM 619
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 90/194 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D FTY ++D ++++ + + M+ G + V Y +++ +
Sbjct: 440 KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRI 499
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A I++EM+L+ V+Y + L + RV++A + +MI GL P+ +TY L
Sbjct: 500 EEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSL 559
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + + G ++A +I M +G PD LI CKAG + +LR ++ +
Sbjct: 560 LTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGM 619
Query: 238 ALRYPVFKEALQTF 251
L + +Q
Sbjct: 620 VLTPHAYNPVIQAL 633
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 193/490 (39%), Gaps = 34/490 (6%)
Query: 23 LLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI 82
++ +LP + + + L+ A FNW S+ F Y +L G+A
Sbjct: 54 IVHHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSF 113
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG------DVDGAVNIWE-EMKLKECYPT 135
M+ V E M+ G D + + ++ + G +V G V + E E ++K P
Sbjct: 114 EYMRRVLEEMKLSGCEFDRGIF---LIFVESYGKFELYDEVVGIVKVMEDEYRIK---PD 167
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
Y + +L +++K + M++R + + T+ +L++ L +A + A+ +
Sbjct: 168 TRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMME 227
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
+M G+ PD+ +++ + G + I M E + F
Sbjct: 228 EMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQG 287
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
D L + S F D +F ++ GL I K + +D++L G
Sbjct: 288 RIDQALSFIQEAVSEGFRPD----QFTYN------TLVNGLCKIGHAKHAMEVVDAMLLG 337
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+D I +++IS + C + A+ + V D + Y A+I L K N
Sbjct: 338 GLDPDIYTYNSLISGL----CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENR 393
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYT 432
+ EI +T G V LI L + A +F + + + C TY
Sbjct: 394 VDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM-KGKGCRPDEFTYN 452
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
LI S+ ++AL + K M G ++ +N L+ G K R+ +AE E +
Sbjct: 453 MLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDE---M 509
Query: 493 QADALSKDAV 502
+ +S+D+V
Sbjct: 510 ELQGVSRDSV 519
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 36/157 (22%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D+FTY ++L F + I + + M G N D VTY +++ L AG V A
Sbjct: 548 GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVA 607
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE------------------- 161
+ +++K T +Y ++ LF +R EA +++E
Sbjct: 608 SRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRG 667
Query: 162 -----------------MIQRGLPPNCYTYTVLMEYL 181
MI+RG P ++ +L E L
Sbjct: 668 LCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGL 704
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 199/475 (41%), Gaps = 58/475 (12%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
D T+ L + E A +F + + GF D T++L F + VF+L
Sbjct: 197 DYRTIVNALCKNGYTEAAEMFMCKILKV-GFLLDSHIVTSLLLGFCRGLNLRDALKVFDL 255
Query: 92 MQEKGINI-DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M +G ++V+Y+ ++H L G ++ A + ++M K C P+ +YT +K L
Sbjct: 256 MSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+ +A +++ EMI RG PN +TYTVL++ L R GK EEA + KM + G+ P N
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDS---LLWQVHP 266
LI CK G +L M++ F E ++ +V + L +
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 267 QFSPEFIS-------------DNDAVEFVTT----DIEGPLSIDQGLVLILLKKKNLVAI 309
SP+ +S N A + +T+ D+E ++ K+
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+ L ++ K I LD +T+I+ C+ + AL E VKM
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKM--------------- 540
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL-LIHRLGSARRPVPAAKIFSLLPEDQKCT 428
++ T P ++ +M G L L L I++LG L+P
Sbjct: 541 --RMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLG-------------LVPS----V 581
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TYT L+ +G + ++ + M G P++ + +++ GL + GRV +AE
Sbjct: 582 VTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 45/311 (14%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+T +++ F + + LM KGI++D VT T+++ + N G A+ I
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFIL 534
Query: 125 EEM-----------------------KLKE------------CYPTIVSYTAYMKILFLN 149
E + KLKE P++V+YT + L +
Sbjct: 535 ETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ + + + M G PN Y YT+++ L + G+ EEA ++ S MQ++GV P+
Sbjct: 595 GDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
++++ G+ + +R M E L ++ L+ F ++ + + + P+
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKG---IRETDPECI 711
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
E IS VE + G L I LV L K+ + L+ I+ + L+ A I
Sbjct: 712 KELIS---VVEQLGGSTSG-LCI--FLVTRLCKEGRTDESNGLVQTILKSGVFLEKA-ID 764
Query: 330 TIIEVNCDHRR 340
I+E C ++
Sbjct: 765 IIMESYCSKKK 775
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 201/448 (44%), Gaps = 53/448 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW FF+ + +S+G D +YT+M+ + +A R+S + +F M+ + A Y
Sbjct: 268 VDMAWKFFHEL-KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYN 326
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +AG + A + +++K + C P++VS+ + + L +V EA ++ E +++
Sbjct: 327 TMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKK 385
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN TY ++++ L AGK EEA I +M+ AG+ P+ NI++++ CKA +
Sbjct: 386 DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKK---- 441
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
F+ A + F+ A + + ++V + +
Sbjct: 442 ------------------FEPAYEMFETASQRG---------------CNPNSVTYCSL- 467
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I+G L KK N+ L ++D + V +++I H R++
Sbjct: 468 IDG-----------LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGH 516
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ + + T + + K K I E++ G V ++LIH L
Sbjct: 517 KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 576
Query: 406 GSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A + + IF + + Y A++ + +G DKA ++ + M K + P++
Sbjct: 577 TKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTV 636
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
T+ ++ GL K+ R+ +A + +E KS
Sbjct: 637 ATYGSIIDGLAKIDRLDEAYMLFEEAKS 664
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 175/438 (39%), Gaps = 52/438 (11%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E A+ F S+ RG N + TY +++D G+ + +FE M + G N + V YTS
Sbjct: 443 EPAYEMFETASQ-RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTS 501
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ G + I++EM + C P + YM +F V++ +++++ G
Sbjct: 502 LIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYG 561
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
P+ +Y++L+ L +AG+ E IF M++ G D A N +++ CK+G+
Sbjct: 562 FLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAY 621
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
+L MK R+ + + D D + + + + I N V D
Sbjct: 622 EVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDE-AYMLFEEAKSKGIELNVIVYSSLIDG 680
Query: 287 EGPLS-IDQG-LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
G + ID+ L+L + KK L + +MD ++ + E+N A
Sbjct: 681 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAE--------EIN-------EA 725
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
L+ F+ +M + Y LI L ++ + K +EM K G
Sbjct: 726 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG-------------- 771
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
L+P TYT +I G+ A +++ G P
Sbjct: 772 ---------------LVPN----VVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAA 812
Query: 465 TFNVLLAGLEKLGRVSDA 482
+FN L+ G+ R +A
Sbjct: 813 SFNALIEGMSHANRAIEA 830
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 26/422 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++D+ A ++ + + M+ G+ + +T ++ L A + A ++E
Sbjct: 393 TYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETA 452
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P V+Y + + L V +A +++ M+ G N YT L+ G+
Sbjct: 453 SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRK 512
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
E+ +IF +M G QPD N ++ KAG+ I +K Y +
Sbjct: 513 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 572
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL-VLILLKK 303
L A E S+ + Q F D A V +D+ VL +K
Sbjct: 573 IHGLTKAGQARETSSIFHAMKQQ---GFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKV 629
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
K + + I+D ++D R D A + FE + + L Y
Sbjct: 630 KRVPPTVATYGSIIDGLAKID---------------RLDEAYMLFEEAKSKGIELNVIVY 674
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+LI K+ + I+EEM K G + VY L+ L A A F + E
Sbjct: 675 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKE 734
Query: 424 DQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
KC T TY+ LI +KA ++ M ++G+ P++ T+ ++AGL K+G ++
Sbjct: 735 -MKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNIT 793
Query: 481 DA 482
DA
Sbjct: 794 DA 795
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A++ F ++S+G + Y++++D FG+ RI + E M +KG+ + T+
Sbjct: 652 LDEAYMLFEE-AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+M L A +++ A+ ++ MK +C P +Y+ + L + +A ++EM ++
Sbjct: 711 SLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 770
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
GL PN TYT ++ L + G +A +F + + G PD A+ N LIE
Sbjct: 771 GLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIE 819
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 177/441 (40%), Gaps = 23/441 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
YT ++ EA++ + MQE G + +T+++ L+ G V+GA+ + +E+
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P IV Y + V A + E+ +GL P+ +YT ++ L +AG+
Sbjct: 244 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRL 303
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA E+F +M+ P A N +I AG+ +L +KE F
Sbjct: 304 SEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSI 363
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
L + D L E + D E P S +++ +L V
Sbjct: 364 LTCLGKKRKVDEAL---------------TLFEAMKKDAE-PNSSTYNIIIDMLCMAGKV 407
Query: 308 AIDSLLSGIMDKSIQLDSAV-ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
++ M+ + + + ++ +++ C ++ + A FE + + N Y +L
Sbjct: 408 EEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSL 467
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I L K + E M GH+ + LI R KIF + +
Sbjct: 468 IDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM-NRRG 526
Query: 427 CTATYTAL---IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG--RVSD 481
C T L + F AG +K I++ + G P + ++++L+ GL K G R +
Sbjct: 527 CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETS 586
Query: 482 AEIYRKEKKSIQADALSKDAV 502
+ + +++ DA + +AV
Sbjct: 587 SIFHAMKQQGFALDARAYNAV 607
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 186/453 (41%), Gaps = 65/453 (14%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ Y TM+ +G A + + + + ++E+G V++ S++ L VD A+ ++E
Sbjct: 323 YAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEA 382
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK K+ P +Y + +L + +V+EA + EM GL PN T ++++ L +A K
Sbjct: 383 MK-KDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKK 441
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+E A E+F + G P+ LI+ K G + M + V+
Sbjct: 442 FEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTS 501
Query: 247 ALQTFKV---ADENDSLLWQVHPQ-FSPEFISDNDAVE--FVTTDIEGPLSIDQGL---- 296
++ F + ++ + +++ + P+ N ++ F D+E +I + +
Sbjct: 502 LIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYG 561
Query: 297 ---------VLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
+LI L K S+ + + LD+ + +++ C + D A
Sbjct: 562 FLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA- 620
Query: 346 LAFEYSVKMDLNLER-----TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
Y V ++ ++R Y ++I L K++ + + EE G L V +
Sbjct: 621 ----YEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIV--- 673
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
Y++LI + G D+A I + M +KG+
Sbjct: 674 ------------------------------YSSLIDGFGKVGRIDEAYLILEEMMKKGLT 703
Query: 461 PSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
P++ T+N L+ L K +++A I + K ++
Sbjct: 704 PNVYTWNSLMDALVKAEEINEALICFQSMKEMK 736
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 170/427 (39%), Gaps = 38/427 (8%)
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
+ A Y +V+ +LS+ D+ + EEM + + + L R+ +A V
Sbjct: 112 LPADAYNAVLPFLSH--DLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERV 169
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
M + P YTVL+ + A + E ALE+ +MQE G + L+ +
Sbjct: 170 IAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAR 229
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
G + ++ +K + L ++ + F A D + W+ + + + +D
Sbjct: 230 EGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVD-MAWKFFHELKSQGLKPDD- 287
Query: 279 VEFVTT--------------DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL- 323
V + + ++ G + ++ + ++ S +G + + +L
Sbjct: 288 VSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGS--AGQFENAYKLL 345
Query: 324 ----DSAVISTIIEVN----CDHRRR--DGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
+ I +++ N C ++R D AL FE ++K D + Y +I +L
Sbjct: 346 DQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFE-AMKKDAEPNSSTYNIIIDMLCMA 404
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TAT 430
+ I +EM AG + +++ RL A++ PA ++F + + C + T
Sbjct: 405 GKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQ-RGCNPNSVT 463
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE-- 488
Y +LI G+ D A ++++ M G + + + L+ GR D KE
Sbjct: 464 YCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMN 523
Query: 489 KKSIQAD 495
++ Q D
Sbjct: 524 RRGCQPD 530
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 8/200 (4%)
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
PL D ++ +L A++ +L + + + + ++ RR D A
Sbjct: 111 PLPADAYNAVLPFLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVI 170
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
++ +AY LIG + + + E++ +M + G+ +GV L L+ L
Sbjct: 171 AAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALARE 230
Query: 409 RRPVPAAKIF-----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
R A + S L D Y I + AG+ D A K + + +G+ P
Sbjct: 231 GRVEGALALVDEVKGSCLEPD---IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDD 287
Query: 464 GTFNVLLAGLEKLGRVSDAE 483
++ ++ L K GR+S+AE
Sbjct: 288 VSYTSMIWVLCKAGRLSEAE 307
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 193/477 (40%), Gaps = 41/477 (8%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQE 94
++ + K + P LF + +S + TY T+LD +F K +M E++
Sbjct: 121 IDGLCKNNEPDRAQELFEHM--KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR 178
Query: 95 KGINID------AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+ ++D +TY+ ++ L A V AV + E MK + C P +++YT + L
Sbjct: 179 RSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK 238
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+V A +V +EM+ G PN TY L+ L RA + +AL + M G P+
Sbjct: 239 ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVT 298
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
LI+ CK G + +L M + ++ + AD+ D + +
Sbjct: 299 YGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAV 358
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL----------SGIMD 318
S D V + +D+ L+L K D +L +G +D
Sbjct: 359 SGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVD 418
Query: 319 KSIQL-----------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
++ L D ST+I+ C R D A L V+M Y +LI
Sbjct: 419 EAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 478
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L LN + E+VEEM ++ + +LIH G R + + L +C
Sbjct: 479 KGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH--GMCRMERVDSAVVLLEQAKARC 536
Query: 428 TA---------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
A Y++LI AG +AL ++ M G+ P T+++LL GL+K
Sbjct: 537 VAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKK 593
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 189/464 (40%), Gaps = 30/464 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D YT +L + KR+ + M++ G + VTY S++ L +
Sbjct: 71 QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEP 130
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-------LPPN 170
D A ++E MK EC P++V+Y + LF +++ A +++EM+ R PN
Sbjct: 131 DRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPN 190
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TY+VL++ L +A + +A+E+ M+ G PD IL++ CK + +LR
Sbjct: 191 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR 250
Query: 231 YMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT-- 284
M + + L +V+D + +P ++ ++ +
Sbjct: 251 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG 310
Query: 285 ---DIEGPLS--IDQG----------LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
D L+ ID+G L+ L K + +LL + I+ D S
Sbjct: 311 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 370
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++I C R D A Y + Y LI L K + ++ E M
Sbjct: 371 SVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGD 430
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKA 447
G V + LI L A R A + + + T TY +LI D+A
Sbjct: 431 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 490
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+++ + M R PS T+N+L+ G+ ++ RV A + ++ K+
Sbjct: 491 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA 534
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 211/494 (42%), Gaps = 43/494 (8%)
Query: 27 LPI-KWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI 82
LPI + D YT +L+ +++A F+ + RS+ + F + ++D +AKR
Sbjct: 2 LPICQPDVYTYAALLRGFCRGGEIDQAQRCFDEM-RSKNLVPNVFLCSILIDGLCKAKRS 60
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
F MQ GI D V YT+++ L +D A+ I EM+ C P +V+Y +
Sbjct: 61 IDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSL 120
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM----- 197
+ L N+ A ++++ M P+ TY L++ L R GK E A+ +F +M
Sbjct: 121 IDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS 180
Query: 198 --QEAGVQPDKAACNILIEKCCKAGETRTIILILRYM--------------------KEN 235
+ P+ ++LI+ CKA + +L M KE+
Sbjct: 181 HDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKES 240
Query: 236 RLALRYPVFKEALQTFKVAD--ENDSLLWQVHPQFSPEFISDNDAV-EFVTTDIEGPLSI 292
++A + V +E L V + +SLL H +SD A+ +T P +
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLL---HGLCRARRVSDALALMRDMTCRGCTPNVV 297
Query: 293 DQG-LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
G L+ L K + ++L+ ++DK D + + +I C + D ++ +
Sbjct: 298 TYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 357
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
V + + Y ++I L + N + ++ + G V L + LI L A +
Sbjct: 358 VSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKV 417
Query: 412 VPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A ++ ++ D C A TY+ LI AG D+A + M R G PS T+N
Sbjct: 418 DEAFDLYEVMAGD-GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNS 476
Query: 469 LLAGLEKLGRVSDA 482
L+ GL L + +A
Sbjct: 477 LIKGLCDLNHLDEA 490
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 12/235 (5%)
Query: 29 IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK D T + V L +++A +V +SRG D Y+T++D +A ++
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYV-KSRGCPPDVILYSTLIDGLCKAGKVDEA 420
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
++E+M G + D VTY++++ L AG VD A + M P+ ++Y + +K
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ-----EA 200
L + + EA ++ +EM + P+ TY +L+ + R + + A+ + + +
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAG 540
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFK 252
G D A + LI+ CKAG + + M +N + + Y + E L+ K
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSK 595
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 148/385 (38%), Gaps = 31/385 (8%)
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C P + +Y A ++ + +A + EM + L PN + ++L++ L +A + +AL
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEAL 248
F MQ +G+ D L+ K + IL M+++ + Y + L
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 249 QTFKVADENDSLLWQVHP-QFSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKN 305
D L + + SP ++ N ++ F T +E +++ Q +L ++
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQE----MLDRR- 179
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
S MD + S +I+ C R A+ E + + Y
Sbjct: 180 --------SHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTI 231
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
L+ L K + E++ EM AG + L+H L ARR A + D
Sbjct: 232 LVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM----RDM 287
Query: 426 KC------TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
C TY LI G A + M KG P L +N+L+ GL K +V
Sbjct: 288 TCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQV 347
Query: 480 SD--AEIYRKEKKSIQADALSKDAV 502
+ A + R I+ D ++ +V
Sbjct: 348 DESIALLRRAVSGGIKPDVVTYSSV 372
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 40/169 (23%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D TY+T++D +A R+ + M G +TY S++ L + +D A
Sbjct: 431 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 490
Query: 121 VNIWEEMKLKECYPTIVSYT-------------------------------------AYM 143
+ + EEM+ C P+ V+Y AY
Sbjct: 491 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYS 550
Query: 144 KI---LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ L RV EA D ++EMI G+ P+ TY++L+E L ++ E
Sbjct: 551 SLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/523 (21%), Positives = 219/523 (41%), Gaps = 31/523 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L ++ D + V +V+KT + FF W ++ R + HD T
Sbjct: 66 RILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDIGVNVKMQFFRWAAKRRNYEHDTST 125
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ ++ M K + E+++ + + V+ L NA V A+ I+ ++
Sbjct: 126 YMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQI 185
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K ++C PT +Y + + +L + + ++Y EM G P+ TY+ L+ + G+
Sbjct: 186 KTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGR 245
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A ++ ++M+E G+QP +LI K + + + M+ + E
Sbjct: 246 RDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTE 305
Query: 247 ALQTFKVA---DENDSLLWQVHPQ-FSPEFISDNDAVEFVTTD----------------- 285
++ A DE +++ + P+ + N+ + F+
Sbjct: 306 LIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLR 365
Query: 286 -IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
I ++ + + + K + S + + I S S +I+ C R + A
Sbjct: 366 CIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKA 425
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
++ E + AY +LI L K + E+ +E+ + S + A++I
Sbjct: 426 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 485
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LG A R A +F + C Y AL+ G D+AL + M G P
Sbjct: 486 LGKAGRLDDAINMFDEM-NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 544
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ ++N++L GL K G A E+ K+S ++ D +S + V
Sbjct: 545 DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTV 587
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEKA + + +GF Y +++D G+AKR +F+ ++E + A Y
Sbjct: 422 MEKAMMLLEEMD-EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L AG +D A+N+++EM C P + +Y A M L + EA + M +
Sbjct: 481 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 540
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G P+ +Y +++ L + G A+E+ S M+++ V+PD + N ++ AG
Sbjct: 541 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAG 595
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG-ALLIHRLGSARRPVPAAKIFSL 420
AY ++I +L+ + KV E+ EM+ GH + + LI R A ++ +
Sbjct: 196 AYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNE 255
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ E+ Q T YT LI ++F AL +++ M + P + T+ L+ GL K GR
Sbjct: 256 MKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGR 315
Query: 479 VSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
+ +A + E +Q + D V M I
Sbjct: 316 IDEAYHFFYE---MQREGCRPDTVVMNNMI 342
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 47/119 (39%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + Y ++ + MQE G D +Y +++ L+ G A
Sbjct: 506 GCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRA 565
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + MK P +VSY + L +EA + +EM G + TY+ ++E
Sbjct: 566 MEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILE 624
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 195/455 (42%), Gaps = 24/455 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTYTT+L F A ++ S +FE M+ G + T+ + + N G
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ I++E+ + P IV++ + + N E + V+KEM + G P T+ L+
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G +E+A+ ++ +M +AGV PD + N ++ + G +L M++ R
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L + E + +H A E + IE + + LVL+
Sbjct: 558 NELTYCSLLHAYANGKE----IGLMHSL----------AEEVYSGVIEPRAVLLKTLVLV 603
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K L + S + ++ D +++++ + + A +Y +
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y +L+ + + F K EI+ E+ G + +I+ R A++IFS
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 420 ------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++P+ TY IG Y + ++A+ + + M + G P+ T+N ++ G
Sbjct: 724 EMRNSGIVPD----VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
KL R +A+++ ++ +++ A + + + E+I
Sbjct: 780 CKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERI 814
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 200/484 (41%), Gaps = 69/484 (14%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNH--DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
L H + A F+W + + + D ++ + G+ R+SS +F +QE G
Sbjct: 145 LGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGF 204
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF-LNDRVKEAT 156
++D +YTS++ +N+G AVN++++M+ C PT+++Y + + + + T
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKIT 264
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ ++M G+ P+ YTY L+ R ++EA ++F +M+ AG DK N L++
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV- 323
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
Y K +R KEA+ KV +E V FSP ++ N
Sbjct: 324 --------------YGKSHRP-------KEAM---KVLNE------MVLNGFSPSIVTYN 353
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ D G++ ++ KN +A +K + D +T++
Sbjct: 354 SLISAYARD---------GMLDEAMELKNQMA---------EKGTKPDVFTYTTLLSGFE 395
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ + A+ FE + A I + F ++ +I +E+ G S +
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 397 LGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
L+ G + +F +PE + T+ LI Y GS ++A+ +
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE----TFNTLISAYSRCGSFEQAMTV 511
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICD 510
Y+ M G+ P L T+N +LA L + G +E + A+ P E C
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE-------KVLAEMEDGRCKPNELTYCS 564
Query: 511 LLYG 514
LL+
Sbjct: 565 LLHA 568
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RGF+ D T +M+ I+G + ++ V + M+E+G TY S+M+ S + D
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ I E+ K P I+SY + N R+++A+ ++ EM G+ P+ TY
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ +EEA+ + M + G +P++ N +++ CK
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RGF TY +++ + + + + + KGI D ++Y +V++ +
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A I+ EM+ P +++Y ++ + +EA V + MI+ G PN TY +
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 178 MEYLVRAGKYEEA 190
++ + + +EA
Sbjct: 776 VDGYCKLNRKDEA 788
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 204/494 (41%), Gaps = 37/494 (7%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
+R+ +S++ K+ D D++K+ P N++L M K L + + +
Sbjct: 54 LRNRLSDIIKV--DDAVDLFGDMVKSRPFP-SIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 61 --GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G +HD +TY+ ++ F ++S V M + G D VT +S+++ ++ +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV + ++M P ++T + LFL+++ EA + +M+QRG P+ TY ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + G + AL + KM++ ++ D N +I+ CK
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK-------------------- 270
Query: 239 LRYPVFKEALQTFKVADEN----DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID- 293
Y +AL F D D + + +DA ++ IE ++ +
Sbjct: 271 --YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 294 ---QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
L+ +K+ LV + L ++ +SI D S++I C H R D A FE
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ D Y LI K + E+ EM++ G LIH AR
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 411 PVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A +F + TY L+ G KA+ +++ + R + P + T+N+
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 469 LLAGLEKLGRVSDA 482
++ G+ K G+V D
Sbjct: 509 MIEGMCKAGKVEDG 522
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 94/168 (55%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+T++ F +AKR+ +F M ++G+ + VTYT+++H A D D A ++++M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+P I++Y + L N ++ +A V++ + + + P+ YTY +++E + +AGK
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
E+ E+F + GV P+ A N +I C+ G +L+ MKE+
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 138/288 (47%), Gaps = 26/288 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N + T++ ++D F + ++ + +++ M ++ I+ D TY+S+++ +D
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++E M K+C+P +V+Y+ +K RV+E ++++EM QRGL N TYT L+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
+A + A +F +M GV P+ NIL++ CK G+ +++ Y++ + +
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 239 --LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y + E + + KV D W++ S + +S N V T I G
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDG-----WELFCNLSLKGVSPN--VIAYNTMISG------- 547
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+K + DSLL + + +S +T+I R RDG
Sbjct: 548 ----FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA----RLRDG 587
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 170/433 (39%), Gaps = 60/433 (13%)
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
LS+ VD AV+++ +M +P+IV + + + ++ + + ++M G+ +
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
YTY++ + R + AL + +KM + G +PD + L+ C + + ++
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 231 YMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTT-- 284
M E + L A E +L+ Q V P+ ++ V +
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 285 ---------------DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
IE + I ++ L K K++ +L + + +K I+ D S
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++I C++ R A ++ +N + ALI +K + ++ +EM K
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---------------------- 427
++ + LI+ R A +F L+ + C
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 428 ----------------TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
T TYT LI +F A D A ++K M G+HP++ T+N+LL
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 472 GLEKLGRVSDAEI 484
GL K G+++ A +
Sbjct: 477 GLCKNGKLAKAMV 489
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+ F +S+ RG + TYTT++ F +A+ + + VF+ M G++ + +TY
Sbjct: 414 VEEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G + A+ ++E ++ P I +Y ++ + +V++ +++ + +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI------------ 213
G+ PN Y ++ R G EEA + KM+E G P+ N LI
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 214 -------EKCCKAGETRTIILILRYMKENRL 237
C AG+ TI L+ + + RL
Sbjct: 593 AELIKEMRSCGFAGDASTIGLVTNMLHDGRL 623
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 185/455 (40%), Gaps = 65/455 (14%)
Query: 56 VSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
+++ GF +Y +LD I K + + V+ M G++++ +Y ++ A
Sbjct: 157 LAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAA 216
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
G+++ + +EEM+ C P +V+Y AY K+ R+ EA + + M GL PN
Sbjct: 217 GNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL----KRIDEAFKLLRSMGLEGLEPN 272
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TY +++ L R G+ EE + ++M G PD N L+ CK G +++
Sbjct: 273 LLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHS 332
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
M N L + + T A + N A+EF
Sbjct: 333 EMLRNGLPPDVVTYTSLINTMCKAG------------------NLNRAMEF--------- 365
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSI----------QLDSAVISTIIEVN----- 335
DQ V L + N V SL++G K + S TI+ N
Sbjct: 366 -FDQMHVRGL--RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNG 422
Query: 336 -CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C R + A+ L+ + +Y +I + + ++ EM + G S
Sbjct: 423 HCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPD 482
Query: 395 VYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKAL 448
+ LI L RR A +F SLLP++ TYT+LI Y G ++AL
Sbjct: 483 AITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDE----FTYTSLINGYCKEGDLNEAL 538
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++ M +KG P T+NVL+ GL K R +A+
Sbjct: 539 NLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A+ ++ + RS GF TY +L+ + R+ + M+ KG++ D V+Y+
Sbjct: 394 MDEAYRIWDEMIRS-GFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYS 452
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ ++D A + EM K P ++Y++ ++ L R+ EA D+++EM+ +
Sbjct: 453 TIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK 512
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
L P+ +TYT L+ + G EAL + +M + G PD N+LI K TR
Sbjct: 513 SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTR 570
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 4/185 (2%)
Query: 35 TVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N +L H ME+A + +G + D +Y+T++ F + + +
Sbjct: 415 TYNALLNGHCVSGRMEEAIGLLRGM-EGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAE 473
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M EKG++ DA+TY+S++ L ++ A ++++EM K P +YT+ +
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGD 533
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ EA +++ EMI++G P+ TY VL+ L + + EA + K+ P+ +
Sbjct: 534 LNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDT 593
Query: 212 LIEKC 216
LIE C
Sbjct: 594 LIESC 598
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 50/221 (22%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D TY++++ E +R++ +F+ M K + D TYTS+++ GD++
Sbjct: 477 KGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNE 536
Query: 120 AVNIWEEMKLKECYPTIVSYT--------------------------------------- 140
A+N+ +EM K P V+Y
Sbjct: 537 ALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE 596
Query: 141 -----------AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
A +K + + EA V++ MI+R PN Y V++ R G +
Sbjct: 597 SCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHK 656
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
A +++ +M + G P L++ G + L++R
Sbjct: 657 AHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIR 697
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 177/432 (40%), Gaps = 19/432 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAV 121
D F+ T +L + R + +M + G D V+YT+V++ GD D A
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAY 216
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ + EM + P +V+Y++ + L + +A +V M++ G+ PNC TY ++
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGY 276
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ + +EA+ KM+ GV+PD N L++ CK G + I M + L
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ LQ + L ++H V I + L+
Sbjct: 337 ATYCTLLQGYAT----KGALVEMHALLDL----------MVRNGIHPDHHVFNILICAYA 382
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K++ + + S + + + +I + C D A+L FE + L
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +LI L + + K E++ EM G L +IH R + + K+F L+
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502
Query: 422 PE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ TY+ LI Y AG D+A K+ +M G+ P T+N L+ G ++ R+
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562
Query: 480 SDAEIYRKEKKS 491
DA KE S
Sbjct: 563 DDALALFKEMVS 574
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 190/449 (42%), Gaps = 27/449 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R + D TY++++ + + + V M + G+ + +TY S++H ++
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKE 284
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++M+ P +V+Y + M L N R EA ++ M +RGL P+ TY L++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQ 344
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G E + M G+ PD NILI K + +L+ M+++ L
Sbjct: 345 GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP 404
Query: 240 RYPVFKEALQTF-KVADENDSLLW---QVHPQFSPEFISDNDAVE----FVTTDIEGPL- 290
+ + K +D++L+ + +P I + F D L
Sbjct: 405 NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI 464
Query: 291 --SIDQGLVLILL----------KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+D+G+ L + K+ ++ + L ++ ++ + ST+I+ C
Sbjct: 465 LEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLA 524
Query: 339 RRRDGA--LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ D A LL+ +SV M + Y LI +++ + +EM +G S +
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDC--VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNII 582
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTM 454
+++ L RR A +++ + + Q +TY ++ D+AL++++ +
Sbjct: 583 TYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
C + TFN+++ L K+GR +A+
Sbjct: 643 CLTDLQLETRTFNIMIGALLKVGRNDEAK 671
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 112/273 (41%), Gaps = 14/273 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + + +++ + R+ + +F+LM G+ + +TY++++ AG +D
Sbjct: 470 RGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDE 529
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + M P V+Y + R+ +A ++KEM+ G+ PN TY ++++
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + A E++ + ++G Q + + NI++ CK T + + + + L L
Sbjct: 590 GLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
F + ND F S+ + T + I QGL
Sbjct: 650 ETRTFNIMIGALLKVGRNDEA-----KDLFVAFSSNGLVPNYWTYRLMAENIIGQGL--- 701
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
L +D L + D +DS +++ I+
Sbjct: 702 ------LEELDQLFFSMEDNGCTVDSGMLNFIV 728
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 7/228 (3%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A LL ++ +K D T N ++ + M+ A F + S G + + TY
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS-GVSPNIITYNI 586
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L +R ++ K ++ + + G ++ TY ++H L D A+ +++ + L +
Sbjct: 587 ILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 646
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
++ + L R EA D++ GL PN +TY ++ E ++ G EE
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++F M++ G D N ++ + + GE L + E +L
Sbjct: 707 QLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 754
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/367 (17%), Positives = 141/367 (38%), Gaps = 27/367 (7%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
PT+ +Y + R+ ++++G T+T L++ L + +A++I
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 194 -FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP---VFKEALQ 249
+M E PD +C IL++ C ++ + +L M ++R P + +
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL-VLILLKKK---- 304
F ++D H D + + ++D+ + VL + K
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 305 NLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
N + +S+L G + ++ D +++++ C + R A F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ K L + Y L+ ++ +++ M + G ++ +LI
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384
Query: 409 RRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ A +FS + + TY A+IG+ +GS D A+ ++ M +G+ P++ +
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444
Query: 467 NVLLAGL 473
L+ L
Sbjct: 445 TSLIHSL 451
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 190/451 (42%), Gaps = 27/451 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF D T TT++ I +F+ M EKG+ DA TY +++ L A
Sbjct: 71 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + E+MK C + +Y + L + EA D++ EMI G+ P+ Y+ LM+
Sbjct: 131 AIKLHEKMK-GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
L R G+ +EALE F +M+ G+ D N LI +AG + + L M +
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249
Query: 238 -ALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
A + + + L + KV + L H P+ ++ N ++ G
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYN--------------TLMNG 295
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L L+ L L + D+ I+L+ + +I C ++ D A FE
Sbjct: 296 LCLV----GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKG 351
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L Y LIG L + ++ EM G L + +L+ L A
Sbjct: 352 LKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAI 411
Query: 416 KIFSLL--PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+F + E + ++ L+ AG ++A K + + + G+ P +N+L+ GL
Sbjct: 412 DLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGL 471
Query: 474 EKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
G +S+A +++ E+K D+++ + +
Sbjct: 472 CNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 502
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FF + RG + D +TY +++ A + + LM ++G + DA T+T
Sbjct: 197 LKEALEFFKEM-EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFT 255
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G V A I E M K P I++Y M L L ++++AT +++ + R
Sbjct: 256 ILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR 315
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
G+ N ++Y +L+ + K +EA +F +M+ G++P N LI C++G RT
Sbjct: 316 GIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 374
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 2/218 (0%)
Query: 29 IKWDSYTVNQVLK--THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
I D YT N ++ + + K +F + RGF+ D FT+T ++D + ++ +
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 271
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ ELM KG D +TY ++M+ L G ++ A ++E + + + SY +
Sbjct: 272 QILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 331
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ ++ EA +++EM +GL P+ TY L+ L ++G+ A ++F +MQ G
Sbjct: 332 CKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL 391
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+ +L++ CK G I + + +K+ VF
Sbjct: 392 STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF 429
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 87/181 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G TY T++ ++ R+ + + +F MQ G + TY ++ L G +
Sbjct: 348 RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHL 407
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+++++ +K E P I ++ + + +++EA + E+ + GL P+ Y +L
Sbjct: 408 EEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNIL 467
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L G EA+++ +M+E G PD N++I+ K E I +L M+
Sbjct: 468 INGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNF 527
Query: 238 A 238
+
Sbjct: 528 S 528
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 144/359 (40%), Gaps = 37/359 (10%)
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++RG P+ T T L++ + +A+++F +M E G+ D ILI CKA +T
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 223 RTIILILRYMKENRLALRYPVF---------------KEALQTFK----VADENDSLLWQ 263
I + MK N + VF EAL F D +++
Sbjct: 129 GLAIKLHEKMKGN---CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYS 185
Query: 264 VHPQFSPEFISDNDAVEF--------VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
F +A+EF ++ D+ S+ GL L K+ + L+
Sbjct: 186 SLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKE----VTWFLNL 241
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
++D+ D+ + +I+ C + A E + Y L+ L +
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQK-CTATYTA 433
++ E + G L V+ +LI+ ++ A ++F + P+ K T TY
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
LIG +G A K++ M G L T+ VLL GL K G + +A ++++ KK+
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKT 420
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 204/467 (43%), Gaps = 42/467 (8%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML------DIFGEAKRISSM 85
D TV L + ++ A +F V R GF D T+++ D GEA R
Sbjct: 196 DYRTVVNALCKNGFVQAAEMFCCKVLR-LGFGLDTHVCTSLVLANCRRDDLGEAFR---- 250
Query: 86 KYVFELM-QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
VFE M +E+ ++VTY+ ++H L AG ++ A + +EM K C P+ +YT +K
Sbjct: 251 --VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIK 308
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+A + EM + PN +TYT+L++ L R GK EEA +F KM + G+ P
Sbjct: 309 AKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP 368
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQ 263
N LI CK G + +L M++ + E ++ +V+ + L
Sbjct: 369 GIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLL 428
Query: 264 VHPQFSPEFISDNDAV-EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ DN + + VT +I LV K+ L ++ + + ++
Sbjct: 429 RR-------VVDNGLLPDRVTYNI---------LVDGFCKEGQLNMAFNIFNSMNSAGLE 472
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D + +I+ C R + A VK ++L+ + ALI K+ V +
Sbjct: 473 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 532
Query: 383 VEEMTK-----AGHSLGVYLGAL-LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIG 436
E M + H+ +L AL ++L A + + L+P T+T LI
Sbjct: 533 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS----VVTHTILIE 588
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ AG +LK+ + M + G P++ T+ +++ GL GRV +AE
Sbjct: 589 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 635
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ A+ FN ++ S G D FT+T ++D + R+ + M +KGI++D VT+T
Sbjct: 456 LNMAFNIFNSMN-SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 514
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G ++E M C T ++ ++ L + ++ EA + +M++
Sbjct: 515 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 574
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ET 222
GL P+ T+T+L+E RAG+ +L++ +M++AG P+ I+I C G E
Sbjct: 575 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 634
Query: 223 RTIIL 227
TI+
Sbjct: 635 ETILF 639
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 29 IKWDSYTVNQVLKTHPPMEKA----WLFFNWV-SRSRGFNHDRFTYTTMLDIFGEAKRIS 83
I D T ++ H + KA +LF N V +R H T+ LD G+ +++
Sbjct: 506 ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAH---TFNCFLDALGKDYKLN 562
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ M + G+ VT+T ++ AG+ ++ + E MK C P + +YT +
Sbjct: 563 EANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIII 622
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
L N RV+EA + M G+ PN +TY VL++ V+AG+ + A +I S M + G Q
Sbjct: 623 NGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 682
Query: 204 PD 205
P+
Sbjct: 683 PN 684
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
++LIH L A R A ++ + E Q T TYT LI G DKA+K+ M
Sbjct: 269 SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT 328
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRK 487
K P++ T+ +L+ L + G++ +A ++RK
Sbjct: 329 KACVPNVHTYTILIDRLCREGKIEEANGVFRK 360
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 21/207 (10%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G + + +TYT +++ R+ + + M G++ + TY ++ AG +
Sbjct: 607 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 666
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV--KEATDVYKEMIQRGLPP-----N 170
D A I M C P Y+A + L++ A ++ R L N
Sbjct: 667 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNN 726
Query: 171 CYT-------------YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
C + Y L+ L + G+ EA ++ M + G+ PDKA +I IE C
Sbjct: 727 CLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYC 785
Query: 218 KAGETRTIILILRYMKENRLALRYPVF 244
K + + ++ + +N+ + +
Sbjct: 786 KTCKYDNCLEFMKLVLDNKFVPSFASY 812
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 281 FVTTDIEGPLSIDQGLVLILLKK-----KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
V+ D+ G + Q V++L+++ +V + L G+ + +L ST++
Sbjct: 113 LVSRDLFG---VAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLM-- 167
Query: 336 CDHRRRDG--ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI-VEEMTKAGHS 392
C + G A L + V L Y ++ L K N F + AE+ ++ + G
Sbjct: 168 CLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK-NGFVQAAEMFCCKVLRLGFG 226
Query: 393 LGVYLGALLIHRLGSARRP--VPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKA 447
L ++ L+ L + RR A ++F + +++ C + TY+ LI AG ++A
Sbjct: 227 LDTHVCTSLV--LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEA 284
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ + M KG PS T+ VL+ +G A
Sbjct: 285 FQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 319
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/494 (21%), Positives = 208/494 (42%), Gaps = 29/494 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L ++ D + V +++KT + FF W ++ R + HD T
Sbjct: 66 RILKIFKWGPDAEKALEVLMLRVDHWLVREIMKTDIGVNVKMQFFRWAAKRRNYEHDTST 125
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ ++ M K + E+++ + + V+ L NA V A+ I+ ++
Sbjct: 126 YMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQI 185
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K ++C PT +Y + + +L + ++ ++Y EM G P+ TY+ L+ + G+
Sbjct: 186 KTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGR 245
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A+++ ++M++ G+QP +L+ K + + + M+ + E
Sbjct: 246 RDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTE 305
Query: 247 ALQTFKVA---DENDSLLWQVHPQ-FSPEFISDNDAVEFVTTD----------------- 285
++ A DE +++ + P+ I N+ + F+
Sbjct: 306 LIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLR 365
Query: 286 -IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
I ++ + + + K + S + + I S S +I+ C R + A
Sbjct: 366 CIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKA 425
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
++ E + AY +LI L K + E+ +E+ + S + A++I
Sbjct: 426 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKH 485
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LG A R A +F + C Y AL+ G D+AL + M G P
Sbjct: 486 LGKAGRLDDAINMFDEM-NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 544
Query: 462 SLGTFNVLLAGLEK 475
+ ++N++L GL+K
Sbjct: 545 DINSYNIILNGLQK 558
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG-ALLIHRLGSARRPVPAAKIFSL 420
AY ++I +L+ + KV E+ EM+ GH + + LI R A ++ +
Sbjct: 196 AYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNE 255
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ ++ Q T YT L+ ++F AL +++ M + P + T+ L+ GL K GR
Sbjct: 256 MKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGR 315
Query: 479 VSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
+ +A + E +Q + D + M I
Sbjct: 316 IDEAYHFFYE---MQREGCRPDTIVMNNMI 342
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 5/162 (3%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D+ S +I C RRD A+ + Y L+ + KLN +
Sbjct: 229 DTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLF 288
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFS 440
EEM V+ LI LG A R A F + + + C T +I
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEM-QREGCRPDTIVMNNMINFLGK 347
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL-EKLGRVSD 481
AG D A+K+++ M PS+ T+N ++ L E R S+
Sbjct: 348 AGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASE 389
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 204/467 (43%), Gaps = 42/467 (8%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML------DIFGEAKRISSM 85
D TV L + ++ A +F V R GF D T+++ D GEA R
Sbjct: 173 DYRTVVNALCKNGFVQAAEMFCCKVLR-LGFGLDTHVCTSLVLANCRRDDLGEAFR---- 227
Query: 86 KYVFELM-QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
VFE M +E+ ++VTY+ ++H L AG ++ A + +EM K C P+ +YT +K
Sbjct: 228 --VFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIK 285
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+A + EM + PN +TYT+L++ L R GK EEA +F KM + G+ P
Sbjct: 286 AKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP 345
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQ 263
N LI CK G + +L M++ + E ++ +V+ + L
Sbjct: 346 GIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLL 405
Query: 264 VHPQFSPEFISDNDAV-EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ DN + + VT +I LV K+ L ++ + + ++
Sbjct: 406 RR-------VVDNGLLPDRVTYNI---------LVDGFCKEGQLNMAFNIFNSMNSAGLE 449
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D + +I+ C R + A VK ++L+ + ALI K+ V +
Sbjct: 450 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 509
Query: 383 VEEMTK-----AGHSLGVYLGAL-LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIG 436
E M + H+ +L AL ++L A + + L+P T+T LI
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS----VVTHTILIE 565
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ AG +LK+ + M + G P++ T+ +++ GL GRV +AE
Sbjct: 566 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 612
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ A+ FN ++ S G D FT+T ++D + R+ + M +KGI++D VT+T
Sbjct: 433 LNMAFNIFNSMN-SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 491
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G ++E M C T ++ ++ L + ++ EA + +M++
Sbjct: 492 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 551
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ET 222
GL P+ T+T+L+E RAG+ +L++ +M++AG P+ I+I C G E
Sbjct: 552 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 611
Query: 223 RTIIL 227
TI+
Sbjct: 612 ETILF 616
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 181/484 (37%), Gaps = 86/484 (17%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +I VF M + G+ +T+ ++++ G V A + M
Sbjct: 314 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 373
Query: 128 KLKECYPTIVSYTAYMKIL--------------------FLNDRV----------KE--- 154
+ C P I +Y M+ L L DRV KE
Sbjct: 374 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 433
Query: 155 --ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
A +++ M GL P+ +T+T L++ L + G+ E+A I M + G+ D+ L
Sbjct: 434 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 493
Query: 213 IEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEAL-QTFKVADENDSLLWQVHPQF 268
I+ CK G+ + + + M ENR A + F +AL + +K+ + N L +
Sbjct: 494 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 553
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
P ++ +E E LS+ +L + +
Sbjct: 554 VPSVVTHTILIEGHCRAGETALSL------------------KMLERMKQAGCSPNVYTY 595
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ II C++ R + A ++ Y L+ +K + +IV M K
Sbjct: 596 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 655
Query: 389 AG-----HSLGVYLGALLIHRLGSARRPVPA-----AKIFSLLPEDQKCTATYTALIGVY 438
G H L ++ R + + A+ S D C +++
Sbjct: 656 NGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHV------ 709
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALS 498
F D ALKI + + G+ P+ +N L+ GL K GR+ I+AD L+
Sbjct: 710 FRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRI------------IEADQLT 756
Query: 499 KDAV 502
+D V
Sbjct: 757 QDMV 760
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPMEKA----WLFFNWV-SRSRGF 62
+ K + A +L ++ I D T ++ H + KA +LF N V +R
Sbjct: 462 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 521
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
H T+ LD G+ +++ + M + G+ VT+T ++ AG+ ++
Sbjct: 522 AH---TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLK 578
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ E MK C P + +YT + L N RV+EA + M G+ PN +TY VL++ V
Sbjct: 579 MLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHV 638
Query: 183 RAGKYEEALEIFSKMQEAGVQPD 205
+AG+ + A +I S M + G QP+
Sbjct: 639 KAGRLDRAFQIVSTMVKNGCQPN 661
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
++LIH L A R A ++ + E Q T TYT LI G DKA+K+ M
Sbjct: 246 SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT 305
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRK 487
K P++ T+ +L+ L + G++ +A ++RK
Sbjct: 306 KACVPNVHTYTILIDRLCREGKIEEANGVFRK 337
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 281 FVTTDIEGPLSIDQGLVLILLKK-----KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
V+ D+ G + Q V++L+++ +V + L G+ + +L ST++
Sbjct: 90 LVSRDLFG---VAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLM-- 144
Query: 336 CDHRRRDG--ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI-VEEMTKAGHS 392
C + G A L + V L Y ++ L K N F + AE+ ++ + G
Sbjct: 145 CLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK-NGFVQAAEMFCCKVLRLGFG 203
Query: 393 LGVYLGALLIHRLGSARRP--VPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKA 447
L ++ L+ L + RR A ++F + +++ C + TY+ LI AG ++A
Sbjct: 204 LDTHVCTSLV--LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEA 261
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ + M KG PS T+ VL+ +G A
Sbjct: 262 FQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 296
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 3/165 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G + + +TYT +++ R+ + + M G++ + TY ++ AG +
Sbjct: 584 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 643
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV--KEATDVYKEMIQRGLPPNCYTYT 175
D A I M C P Y+A + L++ A ++ R L
Sbjct: 644 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNN 703
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L ++ R + AL+I ++++ GV P + N L+ CK G
Sbjct: 704 CLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEG 747
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/523 (21%), Positives = 218/523 (41%), Gaps = 31/523 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L ++ D + V +V+KT + FF W ++ R + HD T
Sbjct: 33 RILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTST 92
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ ++ M K + E+++ + + V+ L NA V A+ I+ ++
Sbjct: 93 YMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQI 152
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K ++C P +Y + + +L + ++ +Y EM G P+ TY+ L+ + G+
Sbjct: 153 KTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGR 212
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A+++ ++M+E G+QP +LI K + + + M+ + E
Sbjct: 213 RDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTE 272
Query: 247 ALQTFKVA---DENDSLLWQVHPQ-FSPEFISDNDAVEFVTTD----------------- 285
++ A DE ++ + P+ + N+ + F+
Sbjct: 273 LIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLR 332
Query: 286 -IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
I ++ + + + K + S + + I S S +I+ C R + A
Sbjct: 333 CIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKA 392
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
++ E + AY +LI L K + E+ +E+ + S + A++I
Sbjct: 393 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 452
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LG A R A +F + C Y AL+ G D+AL + M G P
Sbjct: 453 LGKAGRLDDAINMFDEM-NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 511
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ ++N++L GL K G A E+ K+S ++ D +S + V
Sbjct: 512 DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTV 554
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEKA + + +GF Y +++D G+AKR +F+ ++E + A Y
Sbjct: 389 MEKAMMLLEEMD-EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 447
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L AG +D A+N+++EM C P + +Y A M L + EA + M +
Sbjct: 448 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 507
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G P+ +Y +++ L + G A+E+ S M+++ V+PD + N ++ AG
Sbjct: 508 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAG 562
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSL--GVYLGALLIHRLGSARRPVPAAKIFS 419
AY ++I +L+ + KV ++ EM+ GH V AL+ RR A ++ +
Sbjct: 163 AYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRD-SAIQLLN 221
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E Q T YT LI ++F A AL +++ M + P + T+ L+ GL K G
Sbjct: 222 EMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAG 281
Query: 478 RVSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
R+ +A + E +Q + D V M I
Sbjct: 282 RIDEAYHFFCE---MQREGCRPDTVFMNNMI 309
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 48/119 (40%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + Y ++ + MQE G D +Y +++ L+ G A
Sbjct: 473 GCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRA 532
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + MK P +VSY + L +EA+ + KEM G + TY+ ++E
Sbjct: 533 MEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILE 591
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 204/467 (43%), Gaps = 42/467 (8%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML------DIFGEAKRISSM 85
D TV L + ++ A +F V R GF D T+++ D GEA R
Sbjct: 130 DYRTVVNALCKNGFVQAAEMFCCKVLR-LGFGLDTHVCTSLVLANCRRDDLGEAFR---- 184
Query: 86 KYVFELM-QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
VFE M +E+ ++VTY+ ++H L AG ++ A + +EM K C P+ +YT +K
Sbjct: 185 --VFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIK 242
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+A + EM + PN +TYT+L++ L R GK EEA +F KM + G+ P
Sbjct: 243 AKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP 302
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQ 263
N LI CK G + +L M++ + E ++ +V+ + L
Sbjct: 303 GIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLL 362
Query: 264 VHPQFSPEFISDNDAV-EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ DN + + VT +I LV K+ L ++ + + ++
Sbjct: 363 RR-------VVDNGLLPDRVTYNI---------LVDGFCKEGQLNMAFNIFNSMNSAGLE 406
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D + +I+ C R + A VK ++L+ + ALI K+ V +
Sbjct: 407 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 466
Query: 383 VEEMTK-----AGHSLGVYLGAL-LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIG 436
E M + H+ +L AL ++L A + + L+P T+T LI
Sbjct: 467 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS----VVTHTILIE 522
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ AG +LK+ + M + G P++ T+ +++ GL GRV +AE
Sbjct: 523 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE 569
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ A+ FN ++ S G D FT+T ++D + R+ + M +KGI++D VT+T
Sbjct: 390 LNMAFNIFNSMN-SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT 448
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G ++E M C T ++ ++ L + ++ EA + +M++
Sbjct: 449 ALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 508
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ET 222
GL P+ T+T+L+E RAG+ +L++ +M++AG P+ I+I C G E
Sbjct: 509 GLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 568
Query: 223 RTIIL 227
TI+
Sbjct: 569 ETILF 573
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 181/484 (37%), Gaps = 86/484 (17%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +I VF M + G+ +T+ ++++ G V A + M
Sbjct: 271 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 330
Query: 128 KLKECYPTIVSYTAYMKIL--------------------FLNDRV----------KE--- 154
+ C P I +Y M+ L L DRV KE
Sbjct: 331 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 390
Query: 155 --ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
A +++ M GL P+ +T+T L++ L + G+ E+A I M + G+ D+ L
Sbjct: 391 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 450
Query: 213 IEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEAL-QTFKVADENDSLLWQVHPQF 268
I+ CK G+ + + + M ENR A + F +AL + +K+ + N L +
Sbjct: 451 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 510
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
P ++ +E E LS+ +L + +
Sbjct: 511 VPSVVTHTILIEGHCRAGETALSL------------------KMLERMKQAGCSPNVYTY 552
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ II C++ R + A ++ Y L+ +K + +IV M K
Sbjct: 553 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 612
Query: 389 AG-----HSLGVYLGALLIHRLGSARRPVPA-----AKIFSLLPEDQKCTATYTALIGVY 438
G H L ++ R + + A+ S D C +++
Sbjct: 613 NGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHV------ 666
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALS 498
F D ALKI + + G+ P+ +N L+ GL K GR+ I+AD L+
Sbjct: 667 FRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRI------------IEADQLT 713
Query: 499 KDAV 502
+D V
Sbjct: 714 QDMV 717
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPMEKA----WLFFNWV-SRSRGF 62
+ K + A +L ++ I D T ++ H + KA +LF N V +R
Sbjct: 419 LCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTT 478
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
H T+ LD G+ +++ + M + G+ VT+T ++ AG+ ++
Sbjct: 479 AH---TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLK 535
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ E MK C P + +YT + L N RV+EA + M G+ PN +TY VL++ V
Sbjct: 536 MLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHV 595
Query: 183 RAGKYEEALEIFSKMQEAGVQPD 205
+AG+ + A +I S M + G QP+
Sbjct: 596 KAGRLDRAFQIVSTMVKNGCQPN 618
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
++LIH L A R A ++ + E Q T TYT LI G DKA+K+ M
Sbjct: 203 SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT 262
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRK 487
K P++ T+ +L+ L + G++ +A ++RK
Sbjct: 263 KACVPNVHTYTILIDRLCREGKIEEANGVFRK 294
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 281 FVTTDIEGPLSIDQGLVLILLKK-----KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
V+ D+ G + Q V++L+++ +V + L G+ + +L ST++
Sbjct: 47 LVSRDLFG---VAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLM-- 101
Query: 336 CDHRRRDG--ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI-VEEMTKAGHS 392
C + G A L + V L Y ++ L K N F + AE+ ++ + G
Sbjct: 102 CLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK-NGFVQAAEMFCCKVLRLGFG 160
Query: 393 LGVYLGALLIHRLGSARRP--VPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKA 447
L ++ L+ L + RR A ++F + +++ C + TY+ LI AG ++A
Sbjct: 161 LDTHVCTSLV--LANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEA 218
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ + M KG PS T+ VL+ +G A
Sbjct: 219 FQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 253
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 3/165 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G + + +TYT +++ R+ + + M G++ + TY ++ AG +
Sbjct: 541 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 600
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV--KEATDVYKEMIQRGLPPNCYTYT 175
D A I M C P Y+A + L++ A ++ R L
Sbjct: 601 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNN 660
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L ++ R + AL+I ++++ GV P + N L+ CK G
Sbjct: 661 CLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEG 704
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 201/461 (43%), Gaps = 40/461 (8%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKR-ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
+++S GF +Y +LD K+ + + +F+ M E G++ + TY ++ A
Sbjct: 157 LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
G+++ + + EM+ C P +V+Y AY K+ ++ EA + + M +GL PN
Sbjct: 217 GNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKL----RKIGEAFKLLRLMALKGLNPN 272
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
+Y V++ L R G+ +E EI +M + PD+ N LI C G +++
Sbjct: 273 LISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHA 332
Query: 231 YMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
M +N L+ + + + K + N ++ + Q + N TT I+G
Sbjct: 333 EMVKNGLSPNVVTYTTLINSMCKAGNLNRAM--EFLDQMRDRGLHPNGRT--YTTLIDG- 387
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
QG LK+ + + + +G I ++ +I +C R + A +
Sbjct: 388 -FSQQG----FLKQAYQIMKEMVENGFTPTIITYNA-----LINGHCILGRMEDASGLLQ 437
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
++ + +Y +I + K ++ EM G S V + LI L R
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497
Query: 410 RPVPAAKIF----SL-LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
R +F SL LP D+ TYT+LI Y G DKAL+++ M +KG P +
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDE---VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIV 554
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
T+NVL+ G K R KE K + L +++VP E
Sbjct: 555 TYNVLINGFNKQSRT-------KEAKRLLLKLLYEESVPNE 588
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
Query: 37 NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG 96
+Q L H M K L N V TYTT+++ +A ++ + M+++G
Sbjct: 325 HQALVLHAEMVKNGLSPNVV-----------TYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
++ + TYT+++ S G + A I +EM PTI++Y A + + R+++A+
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ +EMI+RG P+ +Y+ ++ R + E+A ++ +M G+ PD A + LI+
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Query: 217 CK 218
CK
Sbjct: 494 CK 495
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 132/293 (45%), Gaps = 10/293 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A F + + R RG + + TYTT++D F + + + + M E G +TY
Sbjct: 359 LNRAMEFLDQM-RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ G ++ A + +EM + P +VSY+ + N +++A + EM+ +
Sbjct: 418 ALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK 477
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ TY+ L++ L + + E ++F +M G+ PD+ LI C G+
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537
Query: 226 ILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEF 281
+ + M + + + Y V E LL + ++ + P I+ N ++
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN 597
Query: 282 VTT-DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ + L++ +G + K + D +L ++ K +L+ V + II
Sbjct: 598 CNNLEFKSALALMKGFCM----KGLMNEADRVLESMLQKGYKLNEEVYNVIIH 646
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 185/433 (42%), Gaps = 58/433 (13%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+ F + +S + GF DRFT+ ++++ + + ++M ++G + D TY
Sbjct: 297 IEEVLSFIDEMS-NEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYN 355
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L G+V+ AV I +M L++ P V+Y + L ++V+EAT++ + + +
Sbjct: 356 SLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSK 415
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ T+ L++ L + A+E+F +M+ G PD+ N+LI+ C G
Sbjct: 416 GILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEA 475
Query: 226 ILILRYMKE---NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ +L+ M+ +R + Y + K +E + + D +E
Sbjct: 476 LSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIF---------------DEMEL- 519
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
QG+ +N+V ++L+ G+ C +RR +
Sbjct: 520 -----------QGI------SRNVVTYNTLIDGL-------------------CKNRRVE 543
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A + + L ++ Y +L+ + K A+IV+ MT G LI
Sbjct: 544 EAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLI 603
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
L A R A+++ + A TY +I F +A+++++ M KG
Sbjct: 604 LGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDP 663
Query: 461 PSLGTFNVLLAGL 473
P T+ V+ GL
Sbjct: 664 PDAVTYKVVFRGL 676
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 183/455 (40%), Gaps = 18/455 (3%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMK 86
+K D++T N +L K L SR SRG D T+ ++ A +I
Sbjct: 172 LKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAI 231
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ E M G++ D T+T++M G+++GA+ I E+M C + V+ +
Sbjct: 232 LMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGY 291
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
R++E EM G P+ +T+ L+ L R G + ALEI M + G PD
Sbjct: 292 CKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDI 351
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
N LI CK GE + IL M + + + T + EN QV
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLIST--LCKEN-----QVEE 404
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ + + D+ S+ QGL L + +A++ L + K D
Sbjct: 405 ATELARVLTSKG---ILPDVCTFNSLIQGLCLT---NNHRLAME-LFEEMKTKGCHPDEF 457
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+ +I+ C R + AL + + Y LI K + EI +EM
Sbjct: 458 TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM 517
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSA 444
G S V LI L RR AA++ +L E K TY +L+ + AG
Sbjct: 518 ELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDI 577
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
KA I +TM G P T+ L+ GL K GRV
Sbjct: 578 KKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRV 612
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D+FTY ++L F A I + + M G D+VTY +++ LS AG V+ A
Sbjct: 556 GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELA 615
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++LK +Y +K LF R EA +++EM+++G PP+ TY V+
Sbjct: 616 SRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRG 675
Query: 181 LVRAG-KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII-LILRYMKENRLA 238
L G EA++ +M + G PD ++ +L E C T+I L+ R MK+ +
Sbjct: 676 LCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFS 735
Query: 239 ----------LRYPVFKEALQTF 251
L+ F++AL T
Sbjct: 736 DSEVSMIMGFLKIRKFQDALATL 758
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 159/422 (37%), Gaps = 54/422 (12%)
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEK-GINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
R T+ +++ + + + V ++M+E+ G+ +DA TY +++ L + + +
Sbjct: 140 RGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVN 199
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M + P + ++ +K L +++ A + +EM GL P+ T+T LM+ +
Sbjct: 200 SRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEE 259
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G AL I +M AG N+L+ CK G ++ + M
Sbjct: 260 GNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMS----------- 308
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ F P+ + N V GL I K
Sbjct: 309 --------------------NEGFRPDRFTFNSLV--------------NGLCRIGHVKH 334
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
L +D +L D I +++I + C + A+ + D + Y
Sbjct: 335 ALEILDVMLQEGFDPDIFTYNSLIFGL----CKLGEVEEAVEILNQMILRDFSPNTVTYN 390
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
LI L K N + E+ +T G V LI L A ++F + +
Sbjct: 391 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM-KT 449
Query: 425 QKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ C TY LI S G ++AL + K M G ++ T+N L+ G K R+ +
Sbjct: 450 KGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEE 509
Query: 482 AE 483
AE
Sbjct: 510 AE 511
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 164/401 (40%), Gaps = 31/401 (7%)
Query: 101 AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY----PTIVSYTAYMKILFLNDRVKEAT 156
+V Y V+ L G + +EMK C ++ +Y K ++ V
Sbjct: 105 SVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVA-VV 163
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
D+ +E + GL + +TY L+ LV K + + S+M G++PD NILI+
Sbjct: 164 DIMEE--EFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKAL 221
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
C+A + R IL++ M L+ F +Q F + + N + ++ Q +
Sbjct: 222 CRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGF-IEEGNMNGALRIREQMVAAGCPSS 280
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ VT ++ LV K+ + + S + + ++ + D ++++ C
Sbjct: 281 N----VTVNV---------LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLC 327
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
AL + ++ + + Y +LI L KL + EI+ +M S
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTV 387
Query: 397 LGALLIHRL---GSARRPVPAAKIFS---LLPEDQKCTATYTALIGVYFSAGSADKALKI 450
LI L A++ + +LP+ T+ +LI + A+++
Sbjct: 388 TYNTLISTLCKENQVEEATELARVLTSKGILPD----VCTFNSLIQGLCLTNNHRLAMEL 443
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
++ M KG HP T+N+L+ L GR+ +A KE +S
Sbjct: 444 FEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMES 484
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 116/324 (35%), Gaps = 56/324 (17%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q P+ Y ++ L + G + + +M+ G + + ILIE K
Sbjct: 98 QPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAK----- 152
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+ +F EA+ + +E EF DA +
Sbjct: 153 -----------------FELFDEAVAVVDIMEE--------------EFGLKLDAFTY-- 179
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
L+ +L+ L ++ + S ++ + I+ D + +I+ C +
Sbjct: 180 ----------NFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRP 229
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+L E L+ + + L+ I+ I E+M AG +L+H
Sbjct: 230 AILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVH 289
Query: 404 RLGSARRPVPAAKIFSLLPED-----QKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
R ++ S + E + T+ +L+ G AL+I M ++G
Sbjct: 290 GYCKEGR---IEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
P + T+N L+ GL KLG V +A
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEA 370
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 185/470 (39%), Gaps = 87/470 (18%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY T++D +A+ I + VF+ M +KG+ D +TYT ++ L A VD
Sbjct: 324 RGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDR 383
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++++M K P +Y + + +E KEM L P+ +TY +L++
Sbjct: 384 AEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLD 443
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
YL + GK EA +F M G++P I++ K G + +L M N ++
Sbjct: 444 YLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISP 503
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ +F + + D ++ + I
Sbjct: 504 NHRIFNTVICAYAKRAMIDEVMH----------------------------------IFI 529
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+K++ L + T+I+ C R D A+L F + +
Sbjct: 530 KMKQQGLSP---------------NVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPN 574
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG-VYLGALLIH-----RLGSARRPVP 413
+ +L+ L ++ + KV E+ EM G V+ +L + R+ ARR +
Sbjct: 575 NVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLID 634
Query: 414 AAKIFSLLPE--------DQKCTA-----------------------TYTALIGVYFSAG 442
+ L P+ D C A +Y L+ Y AG
Sbjct: 635 SMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAG 694
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
D A +++ M RKG+ P + T+N +L GL + GR S+A E+Y KS
Sbjct: 695 RIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKS 744
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 180/429 (41%), Gaps = 26/429 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D TY T++D +A+ + + VF+ M EKG+ + VTY +++ L A +VD A
Sbjct: 220 GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMA 279
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++M K P+ V+Y + L V A V+++MI RG+ P+ TY +++
Sbjct: 280 EGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDG 339
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +A ++A +F +M + GV+PD I+I+ CKA + + M + +
Sbjct: 340 LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPN 399
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL-I 299
+ + + + + ++ ++ E D+E P GL+L
Sbjct: 400 NGTYNCLIHGYLSTGQWEEVVQRIK--------------EMSAHDLE-PDVFTYGLLLDY 444
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA----FEYSVKMD 355
L K SL ++ K I+ + ++ + GAL V
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLH----GYGKKGALSEMHDLLNLMVANG 500
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
++ + +I K +V I +M + G S V LI L R A
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
F+ + + + +L+ + +K +++ M +GI P + FN +L L
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620
Query: 474 EKLGRVSDA 482
K GRV +A
Sbjct: 621 CKEGRVMEA 629
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 182/444 (40%), Gaps = 63/444 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTY 104
+E + F + ++ G+ D +L + KR+ +M + M E G + V+Y
Sbjct: 100 LELGFAAFGLILKT-GWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSY 158
Query: 105 TSVMHWLSNAGDVDGAVNIWEEM---KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
+++ L + + A + M + C P +VSY + F +V +A ++ E
Sbjct: 159 NTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLE 218
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M G+ P+ TY +++ L +A + + A ++F +M E GV+P+ N +I+ CKA E
Sbjct: 219 M---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQE 275
Query: 222 TRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDND 277
+ + M + + + Y + L + D + + Q + P+ ++ N
Sbjct: 276 VDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYN- 334
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
T I+G L K + + + + ++DK ++ D+ + II+ C
Sbjct: 335 ------TIIDG-----------LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCK 377
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+ D A F+ + + Y LI + + +V + ++EM+ H L
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS--AHDL---- 431
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
+F TY L+ G ++A ++ +M RK
Sbjct: 432 ----------------EPDVF-----------TYGLLLDYLCKNGKCNEARSLFDSMIRK 464
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSD 481
GI PS+ + ++L G K G +S+
Sbjct: 465 GIKPSVTIYGIMLHGYGKKGALSE 488
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 6 SNVYKILKYSTWDSAQDL---LKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSR 58
S VY + W+ ++L + N I+ D N VL K ME L + V
Sbjct: 580 SLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCM 639
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G D +Y T++D A R+ + + M G+ + V+Y +++H AG +D
Sbjct: 640 --GLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRID 697
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-RGLPPNCYTYTVL 177
A ++ EM K P + +Y + LF + R EA ++Y MI+ R L C TY+++
Sbjct: 698 NAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSIC-TYSII 756
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
++ + ++EA +IF + +Q D NI+I+ K G
Sbjct: 757 LDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGG 799
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + + TY T++D + R+ F M +G+ + V + S+++ L
Sbjct: 532 KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKW 591
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ ++ EM + P IV + + L RV EA + M+ GL P+ +Y L
Sbjct: 592 EKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTL 651
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
++ A + +EA+++ M AG++P+ + N L+ CKAG + R M
Sbjct: 652 IDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREM 706
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + + + T++ + + I + ++F M+++G++ + VTY +++ L G VD
Sbjct: 498 ANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVD 557
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV + +M + P V + + + L D+ ++ +++ EM+ +G+ P+ + ++
Sbjct: 558 DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVL 617
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC----------------KAGET 222
L + G+ EA + M G++PD + N LI+ C AG
Sbjct: 618 CNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLK 677
Query: 223 RTII----LILRYMKENRLALRYPVFKEALQ 249
I+ L+ Y K R+ Y +F+E L+
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLR 708
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 139/340 (40%), Gaps = 32/340 (9%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC---KAGETR 223
+ P+C TY++++ R G+ E F + + G + D N L++ C + GE
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139
Query: 224 TIILILRYMKE--NRLA-LRYPVFKEALQTFKVADENDSLLWQV----HPQFSPEFISDN 276
+ +LR M E RL + Y + L + A+E LL + SP+ +S N
Sbjct: 140 HV--LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYN 197
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI----------------MDKS 320
+ EG + L L + ++V ++++ G+ ++K
Sbjct: 198 IVINGFFN--EGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
++ ++ +TII+ C + D A F+ V + Y +I L K +
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVY 438
+ ++M G +I L A+ A +F + + + TYT +I
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
A S D+A +++ M KG+ P+ GT+N L+ G G+
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 45/288 (15%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D + + +K D + N ++ H M++A + + S G + +Y T+L + +
Sbjct: 634 DSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV-SAGLKPNIVSYNTLLHGYCK 692
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA----VNIWEEMKL----- 129
A RI + +F M KG+ TY ++++ L +G A VN+ + KL
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICT 752
Query: 130 ----------KECYPT----------------IVSYTAYMKILFLNDRVKEATDVYKEMI 163
C+ I+++ + LF R ++A D++ +
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIP 812
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
GL P+ TY ++ E L+ G EE +FS M+++G P+ N LI K GE
Sbjct: 813 ANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIP 872
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L + E +L + F + +Q H + PE
Sbjct: 873 RAGAYLSKLDEKNFSLEASTTSMLISLFSREE------YQQHAKSLPE 914
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 179/433 (41%), Gaps = 56/433 (12%)
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
H +TY +++ F +IS + M + G VT +S+++ + + AV +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
++M P +++T + LFL+++ EA + M+QRG PN TY V++ L +
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALR 240
G + AL + +KM+ A ++ D N +I+ CK + + + M+ + +
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y L ++ + +D + L + + +P ++ N L+
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN------------------ALIDA 339
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+K+ V + L ++ +SI D ++++ C H R D A FE+ V D +
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI K E+ EM+ G
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRG----------------------------- 430
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L D T TYT LI F G D A K++K M G+ P + T+++LL GL G++
Sbjct: 431 -LVGD---TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 480 SDA-EIYRKEKKS 491
A E++ +KS
Sbjct: 487 EKALEVFDYMQKS 499
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I + T N ++ K +E L+ + + RS +
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS--ID 362
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY ++++ F R+ K +FE M K D VTY +++ + V+ +
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+YT ++ LF + A V+K+M+ G+PP+ TY++L++ L
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+ALE+F MQ++ ++ D +IE CKAG+
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 109/214 (50%), Gaps = 1/214 (0%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
N + T+ ++D F + + + +++ M ++ I+ D TY S+++ +D A
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++E M K+C+P +V+Y +K + RV++ T++++EM RGL + TYT L++ L
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
G + A ++F +M GV PD +IL++ C G+ + + YM+++ + L
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
++ ++ A + D W + S + + N
Sbjct: 507 IYTTMIEGMCKAGKVDD-GWDLFCSLSLKGVKPN 539
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 112/217 (51%), Gaps = 5/217 (2%)
Query: 22 DLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++K I D +T N ++ H ++KA F ++ F D TY T++ F +
Sbjct: 355 DMIKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCK 412
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+KR+ +F M +G+ D VTYT+++ L + GD D A ++++M P I++
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y+ + L N ++++A +V+ M + + + Y YT ++E + +AGK ++ ++F +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
GV+P+ N +I C + +L+ MKE+
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 175/432 (40%), Gaps = 17/432 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D T+TT++ + S + + M ++G + VTY V++ L GD D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+N+ +M+ + +V + + L V +A +++KEM +G+ PN TY+ L+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G++ +A ++ S M E + P+ N LI+ K G+ + M + +
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F + D D + F EF+ D V T L+
Sbjct: 365 IFTYNSLVNGFCMHDRLD----KAKQMF--EFMVSKDCFPDVVT--------YNTLIKGF 410
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K K + L + + + D+ +T+I+ D A F+ V + +
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y L+ L K E+ + M K+ L +Y+ +I + A + +F
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-AGLEKLG 477
L + TY +I S +A + K M G P+ GT+N L+ A L
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 478 RVSDAEIYRKEK 489
+ + AE+ R+ +
Sbjct: 591 KAASAELIREMR 602
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/474 (19%), Positives = 189/474 (39%), Gaps = 20/474 (4%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ K+ S + ++ L I YT N ++ + L + + G+
Sbjct: 92 LSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY 151
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
T +++L+ + KRIS + + M E G D +T+T+++H L AV
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ + M + C P +V+Y + L A ++ +M + + + +++ L
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ ++AL +F +M+ G++P+ + LI C G +L M E ++
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
F + F + E + D+ + DI S+ G +
Sbjct: 332 TFNALIDAF----------VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM---- 377
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR-RDGALLAFEYSVKMDLNLERT 361
L + ++ K D +T+I+ C +R DG L E S + L +
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTV 436
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y LI L ++ ++M G + ++L+ L + + A ++F +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 422 --PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
E + YT +I AG D ++ ++ KG+ P++ T+N +++GL
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY+ +LD ++ VF+ MQ+ I +D YT+++ + AG VD
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +V+Y + L ++EA + K+M + G PN TY L+
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G + E+ +M+ C G+ TI L+ + + RL
Sbjct: 583 RAHLRDGDKAASAELIREMRS----------------CRFVGDASTIGLVANMLHDGRL 625
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 161/394 (40%), Gaps = 36/394 (9%)
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
++ +A ++ M++ P+ + L+ + + K++ + + KMQ + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 211 ILIEKCCKAGE-TRTIILILRYMK---ENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
ILI C+ + + + L+ + MK E + + +++D + V
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 267 QFSPEFIS-------------DNDAVEFVTTDIE---GPLSIDQGLVLILLKKKNLVAID 310
+ P+ I+ ++AV V ++ P + G+V+ L K+ +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 311 -SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+LL+ + I+ D + +TII+ C +R D AL F+ + Y +LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPE 423
L + ++++ +M + + + LI + V A K++ S+ P+
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA- 482
TY +L+ + DKA ++++ M K P + T+N L+ G K RV D
Sbjct: 365 ----IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 483 EIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
E++R+ + L D V I L + GD
Sbjct: 421 ELFRE----MSHRGLVGDTVTYTTLIQGLFHDGD 450
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 230/522 (44%), Gaps = 50/522 (9%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEK---AWLFFNWVSRSRG 61
+S + KI YS S + ++ + D T+N +L + + + F + R RG
Sbjct: 76 LSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILR-RG 134
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
++ + TY T++ RIS +F MQ+ G D VTY +++ L G+++ A+
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIAL 194
Query: 122 NIWEEMKLK------ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ +EM C P +++Y + L R EA +++EM +G+ P+ +Y
Sbjct: 195 KLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYN 254
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ AGK+EE+ + +M + G+QPD N+LI+ CK G+ +L M E+
Sbjct: 255 SLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 314
Query: 236 RLALRYPVFKEALQTF-KVADENDSL-LWQVHPQ--FSPEFISDNDAVEFV--TTDIEGP 289
+ + ++ F V D N + L+ P P+ IS N + T +E
Sbjct: 315 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 374
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGI-----MDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ + ++L+ K+ N++ DSLL GI +D + +L S + + I N
Sbjct: 375 MKLYNEMLLVG-KRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN--------- 424
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
++ Y + +D L K + + ++ E+ + L + LI
Sbjct: 425 --SYTYGIFLD-------------GLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 469
Query: 405 LGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L A + A ++F L + + TYT +I + G DKA + + M G P
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529
Query: 463 LGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
+ T+N L+ G + ++ + ++R +K + DA++ V
Sbjct: 530 IITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 571
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 116/264 (43%), Gaps = 39/264 (14%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++++ F ++S + +F M KG D ++Y +++ S V+ A
Sbjct: 315 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 374
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV---- 176
+ ++ EM L P +++Y + +K +FL +V +A ++ M G+ N YTY +
Sbjct: 375 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 434
Query: 177 -------------------------------LMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L++ L +AGK E A E+F K+ G +P+
Sbjct: 435 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 494
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
I+I C+ G+ ++++ M+ N + ++ F +++ + ++ +H
Sbjct: 495 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 554
Query: 266 ----PQFSPEFISDNDAVEFVTTD 285
SP+ I+ + V+ ++ D
Sbjct: 555 RMAQKDVSPDAITCSIVVDMLSKD 578
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 72/139 (51%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S F + ++D +A ++ + +FE + +G + VTYT ++H G V
Sbjct: 452 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 511
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + ++M+ C P I++Y M+ + +++++E + M Q+ + P+ T +++
Sbjct: 512 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 571
Query: 178 MEYLVRAGKYEEALEIFSK 196
++ L + KY+E L + +
Sbjct: 572 VDMLSKDEKYQECLHLLPR 590
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 194/452 (42%), Gaps = 29/452 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G D +L + R+ K VF ++ GI+ D +TYT ++ S A +
Sbjct: 443 KSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNA 502
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I+ EM C P +++ + + +L+ R EA ++ E+ + L P TY L
Sbjct: 503 DEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTL 562
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L R GK +E +++ M P+ N +++ CK GE + +L M N
Sbjct: 563 LAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGC 622
Query: 238 ALRYPVFKEALQTFKVADENDSLLW---QVHPQFSPEFISDNDAV-EFVTTDI-EGPLSI 292
+ + D D W Q+ +P++ + + FV + + + L
Sbjct: 623 MPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHT 682
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIM-----DKSIQ-----------LDSAVISTIIEVNC 336
+ +L K + ++ SL+ GI+ +KSI+ LD +S II C
Sbjct: 683 VREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLC 742
Query: 337 DHRRRDGALLAFEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
H+ AL A E K + ++L+ +Y ALI L+ + E+ EM + G
Sbjct: 743 KHKE---ALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDP 799
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
+ L++ +G + R KI + + TY +I + D+A+ +Y
Sbjct: 800 DEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLY 859
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ +G P+ T+ LL GL K G + DAE
Sbjct: 860 YQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 185/424 (43%), Gaps = 30/424 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T+ G + S +M+E GI ++A TY ++++L +G A+++++ M
Sbjct: 138 TFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAM 197
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
PT+ +Y+ M + + EM RG+ PN Y+YT+ + L +AG+
Sbjct: 198 AADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRL 257
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EEA I KM+E G +PD +LI+ C AG + MK + +
Sbjct: 258 EEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITL 317
Query: 248 LQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLS-IDQGL-VLILLKKK 304
L K D DS + ++ + +DN D + +D+ L V +K+K
Sbjct: 318 LD--KCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK 375
Query: 305 NLV----AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG--ALLAFEYSVKMDLNL 358
++ + +SL+SG + K+ + + A + +N +G +L Y K +L
Sbjct: 376 GIIPQQYSYNSLISGFL-KADRFNRA-LELFNHMNIHGPTPNGYTHVLFINYHGKSGESL 433
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ L+ K IV ++ AG++ V G RLG A+R K
Sbjct: 434 KALKRYELM----------KSKGIVPDVV-AGNA--VLYGLAKTGRLGMAKRVFHELKAM 480
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ P++ TYT +I A +AD+A+KI+ M P + N L+ L K GR
Sbjct: 481 GISPDN----ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGR 536
Query: 479 VSDA 482
++A
Sbjct: 537 GNEA 540
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY +LD G++ RI M + E M KG VTY +++ L + +D A
Sbjct: 796 GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 855
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+N++ ++ + PT +Y + L + +++A ++ EM++ G PNC Y +L+
Sbjct: 856 INLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNG 915
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
AG E+ E+F M E G+ PD + ++I+ C G
Sbjct: 916 YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADG 955
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 33 SYTVN-QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
SYT+ +VL +E+A+ + G D T T ++ I +A R++ K VF
Sbjct: 243 SYTICIRVLGQAGRLEEAYRILRKMEE-EGCKPDVVTNTVLIQILCDAGRLADAKDVFWK 301
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ D VTY +++ ++GD IW +K +VSYTA + L R
Sbjct: 302 MKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGR 361
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V EA DV+ EM Q+G+ P Y+Y L+ ++A ++ ALE+F+ M G P+ +
Sbjct: 362 VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVL 421
Query: 212 LIEKCCKAGET 222
I K+GE+
Sbjct: 422 FINYHGKSGES 432
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W ++ DR TY T+LD G++ S+ ++ ++ G N + V+YT+ + L
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQV 359
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G VD A+++++EMK K P SY + + DR A +++ M G PN YT+
Sbjct: 360 GRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTH 419
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ + Y ++G+ +AL+ + M+ G+ PD A N ++ K G
Sbjct: 420 VLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTG 465
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 195/450 (43%), Gaps = 60/450 (13%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V + G + +TY ++ ++ V++ M G+ TY+ +M
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRR 220
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D + V + EM+ + P + SYT +++L R++EA + ++M + G P+ T T
Sbjct: 221 DAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNT 280
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
VL++ L AG+ +A ++F KM+ + +PD+ L++KC +G++R++
Sbjct: 281 VLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSV---------- 330
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
E K ND+++ + + DA+ V +D+
Sbjct: 331 ---------SEIWNALKADGYNDNVV---------SYTAAVDALCQVG-------RVDEA 365
Query: 296 L-VLILLKKKNLV----AIDSLLSGIM-----DKSIQLDSAV---------ISTIIEVNC 336
L V +K+K ++ + +SL+SG + +++++L + + + ++ +N
Sbjct: 366 LDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINY 425
Query: 337 DHRRRDG--ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
+ + AL +E + + A A++ L K + E+ G S
Sbjct: 426 HGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPD 485
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA---LIGVYFSAGSADKALKIY 451
++I A A KIF+ + E+ +C A LI + + AG ++A KI+
Sbjct: 486 NITYTMMIKCCSKASNADEAMKIFAEMIEN-RCAPDVLAMNSLIDMLYKAGRGNEAWKIF 544
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ + P+ T+N LLAGL + G+V +
Sbjct: 545 YELKEMNLEPTDCTYNTLLAGLGREGKVKE 574
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF+ TY +LD + I + +F+ M E G + Y +++ AGD +
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
++E M + P I SYT + L + R+ + +K++ GL P+ TY +L+
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L ++G+ EEAL +++ M++ G+ P+ N LI KAG+
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 77/148 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N D +YT ++D R++ F+ + + G+ D +TY ++H L +G ++
Sbjct: 935 QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEE 994
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ +M+ K P + +Y + + L + EA +Y+E++ +G PN +TY L+
Sbjct: 995 ALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIR 1054
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+G E A + +M G +P+ +
Sbjct: 1055 GYSVSGSPENAFAAYGRMIVGGCRPNSS 1082
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +L+ + A + +FE M E+G+N D +YT V+ L G ++ ++ ++++
Sbjct: 909 YNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 968
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +++Y + L + R++EA +Y +M ++G+ PN YTY L+ YL +AGK
Sbjct: 969 DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAA 1028
Query: 189 EALEIFSKMQEAGVQPDKAACNILI 213
EA +++ ++ G +P+ N LI
Sbjct: 1029 EAGKMYEELLAKGWKPNVFTYNALI 1053
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F M+ G + D TY ++ + + ++ + I EEM K T V+Y + L
Sbjct: 788 LFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLV 847
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ + EA ++Y +++ G P TY L++ L++ G E+A +F +M E G +P+ A
Sbjct: 848 KSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCA 907
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRL 237
NIL+ AG+T + + M E +
Sbjct: 908 IYNILLNGYRIAGDTEKVCELFESMVEQGM 937
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 174/431 (40%), Gaps = 42/431 (9%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T+ I R MK ++E + D+ S +H L ++G + K
Sbjct: 660 YATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSL-----MEGILKRDGTEK 714
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKE---------ATDVYKEMIQRGLPPNCYTYTVLME 179
E I S + LFL+ ++ A ++ K+ G+ +Y L+
Sbjct: 715 SIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALIC 774
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
LV + A E+FS+M+ G PD+ +++++ K+ ++ I M
Sbjct: 775 GLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKS 834
Query: 240 RYPVFK---EALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y + L K+ DE +L +Q+ + FSP T GPL +D
Sbjct: 835 TYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP------------TPCTYGPL-LDG- 880
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
LLK N+ ++L +++ + + A+ + ++ + FE V+
Sbjct: 881 ----LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+N + +Y +I L +++T G + LLIH LG + R A
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 416 KIFSLLPEDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
+++ + ++K A TY +LI AG A +A K+Y+ + KG P++ T+N L+
Sbjct: 997 SLYNDM--EKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIR 1054
Query: 472 GLEKLGRVSDA 482
G G +A
Sbjct: 1055 GYSVSGSPENA 1065
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++ G++ R+ ++ M++KGI + TY S++ +L AG A
Sbjct: 971 GLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEA 1030
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
++EE+ K P + +Y A ++ ++ + A Y MI G PN TY L
Sbjct: 1031 GKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
>gi|255568233|ref|XP_002525091.1| hypothetical protein RCOM_0552890 [Ricinus communis]
gi|223535550|gb|EEF37218.1| hypothetical protein RCOM_0552890 [Ricinus communis]
Length = 129
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%)
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
+IGVYFSAGSA KALKIYKTM + I+PSLGT+NVLLAGLEK GRV + + +RKEK+S+
Sbjct: 1 MIGVYFSAGSAAKALKIYKTMKKNSINPSLGTYNVLLAGLEKSGRVCETDNFRKEKRSLM 60
Query: 494 ADALSKDAVPMEEKICDLLYGGD 516
AD +PMEEKICDLL+ G
Sbjct: 61 ADGNRLSCLPMEEKICDLLFAGS 83
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/523 (21%), Positives = 219/523 (41%), Gaps = 31/523 (5%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L +K D + V +V+KT + FF W +R R + HD T
Sbjct: 62 RILKIFKWGPDAEKALEVLMMKVDHWLVREVMKTDVGVSVKMQFFRWAARKRNYEHDTST 121
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ ++ M K + E+++ + + + ++ L NA + AV I+ ++
Sbjct: 122 YMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQI 181
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K ++C PT +Y + + +L ++ ++Y EM G P+ TY+ L+ + G+
Sbjct: 182 KARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGR 241
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A+ + ++M++ G+QP +L+ K + + M+ + E
Sbjct: 242 QDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTE 301
Query: 247 ALQTFKVA---DENDSLLWQVHPQ-FSPEFISDNDAVEFVTTD----------------- 285
++ A DE + ++ + P+ + N+ + F+
Sbjct: 302 LIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLR 361
Query: 286 -IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
I ++ + + + K + I S + I S +I+ C R + A
Sbjct: 362 CIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKA 421
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
++ E + AY +LI L K + E+ +E+ + S + A++I
Sbjct: 422 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKH 481
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LG A R A +F + CT Y AL+ AG D+AL + M G P
Sbjct: 482 LGKAGRLDDAVDLFDEM-NRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIP 540
Query: 462 SLGTFNVLLAGLEKLGRVSDA--EIYRKEKKSIQADALSKDAV 502
+ ++N++L L K G A + ++ +I+ DA+S + V
Sbjct: 541 DINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTV 583
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 5/217 (2%)
Query: 54 NWVSRSRG--FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+W R +G + FTY+ ++D F + R + E M EKG Y S++ L
Sbjct: 388 SWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDAL 447
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
A D A +++E+K + Y +K L R+ +A D++ EM + G PN
Sbjct: 448 GKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNV 507
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
Y Y LM L RAG +EAL +MQ+ G PD + NI++ K G + +L
Sbjct: 508 YAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCN 567
Query: 232 MKENRL---ALRYPVFKEALQTFKVADENDSLLWQVH 265
MK++ + A+ Y AL + +E L+ +++
Sbjct: 568 MKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMN 604
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKA + + +GF Y +++D G+AKR +F+ ++E + A Y
Sbjct: 419 EKAMMLLEEMD-EKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAV 477
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L AG +D AV++++EM C P + +Y A M L + EA + M G
Sbjct: 478 MIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHG 537
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
P+ +Y +++ L + G + A+ + M+++ ++PD + N ++ AG
Sbjct: 538 CIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAG 591
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y M+ G+A R+ +F+ M G + Y ++M L+ AG +D A+ M+
Sbjct: 475 YAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQ 534
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P I SY + L A + M Q + P+ +Y ++ L AG +E
Sbjct: 535 DHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFE 594
Query: 189 EALEIFSKMQEAGVQPD 205
EA ++ +M G D
Sbjct: 595 EAAKLMKEMNAIGFDYD 611
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 48/119 (40%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + Y ++ A + MQ+ G D +Y +++ L+ G D A
Sbjct: 502 GCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRA 561
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + MK P VSY + L +EA + KEM G + TY+ ++E
Sbjct: 562 MGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILE 620
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 177/432 (40%), Gaps = 19/432 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAV 121
D F+ T +L + R + +M + G D V+YT+V++ GD D A
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAY 216
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ + EM + P +V+Y++ + L + +A +V M++ G+ PNC TY ++
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGY 276
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ + +EA+ KM+ GV+PD N L++ CK G + I M + L
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ LQ + L ++H V I + L+
Sbjct: 337 ATYCTLLQGYAT----KGALVEMHALLDL----------MVRNGIHPDHHVFNILICAYA 382
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K++ + + S + + + +I + C D A+L FE + L
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +LI L + + K E++ EM G L +IH R + + K+F L+
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502
Query: 422 PE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ TY+ LI Y AG D+A K+ +M G+ P T+N L+ G ++ R+
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562
Query: 480 SDAEIYRKEKKS 491
DA KE S
Sbjct: 563 DDALALFKEMVS 574
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 190/449 (42%), Gaps = 27/449 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R + D TY++++ + + + V M + G+ + +TY S++H ++
Sbjct: 225 RRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKE 284
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++M+ P +V+Y + M L N R EA ++ M +RGL P+ TY L++
Sbjct: 285 AIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQ 344
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G E + M G+ PD NILI K + +L+ M+++ L
Sbjct: 345 GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP 404
Query: 240 RYPVFKEALQTF-KVADENDSLLW---QVHPQFSPEFISDNDAVE----FVTTDIEGPL- 290
+ + K +D++L+ + +P I + F D L
Sbjct: 405 NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI 464
Query: 291 --SIDQGLVLILL----------KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+D+G+ L + K+ ++ + L ++ ++ + ST+I+ C
Sbjct: 465 LEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLA 524
Query: 339 RRRDGA--LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ D A LL+ +SV M + Y LI +++ + +EM +G S +
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDC--VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNII 582
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTM 454
+++ L RR A +++ + + Q +TY ++ D+AL++++ +
Sbjct: 583 TYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 642
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
C + TFN+++ L K+GR +A+
Sbjct: 643 CLTDLQLETRTFNIMIGALLKVGRNDEAK 671
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 148/331 (44%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D + ++ + + +++ VF M++ G+N + VTY +V+ L +G VD A
Sbjct: 366 GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDA 425
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+M + P I+ YT+ + L + D+ +A ++ EM+ RG+ N + ++
Sbjct: 426 MLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHS 485
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ E+ ++F M GV+P+ + LI+ C AG+ +L M +
Sbjct: 486 HCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + +V+ +D+L E +S + +T +I I QG
Sbjct: 546 CVTYNTLINGYCRVSRMDDAL------ALFKEMVSSGVSPNIITYNI-----ILQG---- 590
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + A L GI QL+ + + I+ C + D AL F+ DL LE
Sbjct: 591 LFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 650
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ +IG L+K+ + ++ ++ G
Sbjct: 651 TRTFNIMIGALLKVGRNDEAKDLFAALSANG 681
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 7/229 (3%)
Query: 17 WDSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D A LL ++ +K D T N ++ + M+ A F + S G + + TY
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS-GVSPNIITYN 585
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L +R ++ K ++ + + G ++ TY ++H L D A+ +++ + L
Sbjct: 586 IILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 645
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ ++ + L R EA D++ + GL P+ TY+++ E L+ G EE
Sbjct: 646 DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEEL 705
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++F M+E G + N ++ K + G+ L + E +L
Sbjct: 706 DDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSL 754
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/367 (17%), Positives = 141/367 (38%), Gaps = 27/367 (7%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
PT+ +Y + R+ ++++G T+T L++ L + +A++I
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 194 -FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP---VFKEALQ 249
+M E PD +C IL++ C ++ + +L M ++R P + +
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL-VLILLKKK---- 304
F ++D H D + + ++D+ + VL + K
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 305 NLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
N + +S+L G + ++ D +++++ C + R A F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ K L + Y L+ ++ +++ M + G ++ +LI
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384
Query: 409 RRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ A +FS + + TY A+IG+ +GS D A+ ++ M +G+ P++ +
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444
Query: 467 NVLLAGL 473
L+ L
Sbjct: 445 TSLIHSL 451
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 213/508 (41%), Gaps = 29/508 (5%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+++V K+ YST + ++ I+ D YT+N ++ + F RGF
Sbjct: 953 LASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGF 1012
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T TT++ I +F+ M +KG+ DA TY +++ L A A+
Sbjct: 1013 EPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIK 1072
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ E+MK C + +Y + L + EA D++ EMI G+ P+ Y+ LM+ L
Sbjct: 1073 LHEKMK-GNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 1131
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---AL 239
R G+ +EALE F +M+ G+ D N LI +AG + + L M + A
Sbjct: 1132 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 1191
Query: 240 RYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ + + L + KV + L H P+ ++ N ++ GL L
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYN--------------TLMNGLCL 1237
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ L L + D+ I+L+ + +I C ++ D A FE L
Sbjct: 1238 V----GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKP 1293
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y LIG L + ++ EM G L + +L+ L A +F
Sbjct: 1294 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLF 1353
Query: 419 SLLP--EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ E + ++ L+ AG ++A K + + + G+ P +N+L+ GL
Sbjct: 1354 QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 1413
Query: 477 GRVSDAE--IYRKEKKSIQADALSKDAV 502
G +S+A +++ E+K D+++ + +
Sbjct: 1414 GMLSEAVKLLWQMEEKGCLPDSITFNVI 1441
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A+ FF + R +G TY T++ ++ R+ + + +F MQ G + TY
Sbjct: 1276 IDEAFRFFEEM-RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC 1334
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G ++ A+++++ +K E P I ++ + + +++EA + E+ +
Sbjct: 1335 VLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKN 1394
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ Y +L+ L G EA+++ +M+E G PD N++I+ K E
Sbjct: 1395 GLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 1454
Query: 226 ILILRYMKENRLA 238
I +L M+ +
Sbjct: 1455 IQLLEEMRNRNFS 1467
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
I+ LND +K ++ + P T+ L+ + + G Y ++ K+ + G+QP
Sbjct: 924 IIKLNDAIK----LFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQP 979
Query: 205 DKAACNILIEKCC 217
D NILI CC
Sbjct: 980 DLYTLNILIHCCC 992
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 201/461 (43%), Gaps = 40/461 (8%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKR-ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
+++S GF +Y +LD K+ + + +F+ M E G++ + TY ++ A
Sbjct: 157 LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
G+++ + + EM+ C P +V+Y AY K+ ++ EA + + M +GL PN
Sbjct: 217 GNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKL----RKIGEAFKLLRLMALKGLNPN 272
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
+Y V++ L R G+ +E EI +M + PD+ N LI C G +++
Sbjct: 273 LISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHA 332
Query: 231 YMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
M +N L+ + + + K + N ++ + Q + N TT I+G
Sbjct: 333 EMVKNGLSPNVVTYTTLINSMCKAGNLNRAM--EFLDQMRDRGLHPNGRT--YTTLIDG- 387
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
QG LK+ + + + +G I ++ +I +C R + A +
Sbjct: 388 -FSQQG----FLKQAYQIMKEMVENGFTPTIITYNA-----LINGHCILGRMEDASGLLQ 437
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
++ + +Y +I + K ++ EM G S V + LI L R
Sbjct: 438 EMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497
Query: 410 RPVPAAKIF----SL-LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
R +F SL LP D+ TYT+LI Y G DKAL+++ M +KG P +
Sbjct: 498 RLGEVCDLFQEMLSLGLPPDE---VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIV 554
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
T+NVL+ G K R KE K + L +++VP E
Sbjct: 555 TYNVLINGFNKQSRT-------KEAKRLLLKLLYEESVPNE 588
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
Query: 37 NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG 96
+Q L H M K L N V TYTT+++ +A ++ + M+++G
Sbjct: 325 HQALVLHAEMVKNGLSPNVV-----------TYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
++ + TYT+++ S G + A I +EM PTI++Y A + + R+++A+
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ +EMI+RG P+ +Y+ ++ R + E+A ++ +M G+ PD A + LI+
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Query: 217 CK 218
CK
Sbjct: 494 CK 495
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 132/293 (45%), Gaps = 10/293 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A F + + R RG + + TYTT++D F + + + + M E G +TY
Sbjct: 359 LNRAMEFLDQM-RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ G ++ A + +EM + P +VSY+ + N +++A + EM+ +
Sbjct: 418 ALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK 477
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ TY+ L++ L + + E ++F +M G+ PD+ LI C G+
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537
Query: 226 ILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEF 281
+ + M + + + Y V E LL + ++ + P I+ N ++
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN 597
Query: 282 VTT-DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ + L++ +G + K + D +L ++ K +L+ V + II
Sbjct: 598 CNNLEFKSALALMKGFCM----KGLMNEADRVLESMLQKGYKLNEEVYNVIIH 646
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 180/415 (43%), Gaps = 58/415 (13%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY M+ + +A I++ V + M ++ D VTY +++ L ++G + A+ +
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M ++CYP +++YT ++ + V +A + EM RG P+ TY VL+ + +
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ +EA++ + M +G QP+ NI++ C G R+M +L
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG---------RWMDAEKL------- 331
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+AD + FSP ++ N + F L +K
Sbjct: 332 --------LAD-------MLRKGFSPSVVTFNILINF-------------------LCRK 357
Query: 305 NLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
L+ AID +L + Q +S + ++ C ++ D A+ E V +
Sbjct: 358 GLLGRAID-ILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLL 421
Y ++ L K EI+ +++ G S + +I L A + A K+ +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 422 PEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+D K T TY++L+G G D+A+K + R G+ P+ TFN ++ GL K
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCK 531
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ E M +G D VTY +++ L G V+ A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V I ++ K C P +++Y + L + +A + EM + L P+ TY+ L+
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L R GK +EA++ F + + GV+P+ N ++ CK +T I L YM
Sbjct: 494 LSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYM 545
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYT 70
K ++A +L + + D T N +L++ K + R R D TYT
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+++ + + + M+++G D VTY +++ + G +D A+ +M
Sbjct: 244 ILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P ++++ ++ + R +A + +M+++G P+ T+ +L+ +L R G A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCK 218
++I KM + G QP+ + N L+ CK
Sbjct: 364 IDILEKMPKHGCQPNSLSYNPLLHGFCK 391
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 183/463 (39%), Gaps = 81/463 (17%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TT++ F + + E+++ G D +TY ++ AG+++ A+++
Sbjct: 136 DIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M + P +V+Y ++ L + ++K+A +V M+QR P+ TYT+L+E R
Sbjct: 196 DRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN----RLALR 240
+A+++ +M++ G PD N+L+ CK G I L M + +
Sbjct: 253 SGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + T + D L + FSP ++ N + F+ +G L G + +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR--KGLL----GRAIDI 366
Query: 301 LKK-------KNLVAIDSLLSGI-----MDKSIQL-----------DSAVISTIIEVNC- 336
L+K N ++ + LL G MD++I+ D +T++ C
Sbjct: 367 LEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 337 DHRRRDGALLAFEYSVK----------------------------------MDLNLERTA 362
D + D + + S K DL +
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR--LGSAR-RPVPAAKIFS 419
Y +L+G L + + + E + +GV A+ + LG + R A F
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFER----MGVRPNAVTFNSIMLGLCKTRQTDRAIDFL 542
Query: 420 LLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ ++ C T YT LI G A +AL++ +C KG+
Sbjct: 543 VYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 20 AQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLD 74
A D+L+ +P + +S + N +L +K ++ R SRG D TY TML
Sbjct: 363 AIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ ++ + + KG + +TY +V+ L+ AG A+ + +EM+ K+ P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
++Y++ + L +V EA + E + G+ PN T+ +M L + + + A++
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFL 542
Query: 195 SKMQEAGVQPDKAACNILIE 214
M G +P + + ILIE
Sbjct: 543 VYMINRGCKPTETSYTILIE 562
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A N +S S+G + TY T++D +A + + + M+ K + D +TY+
Sbjct: 430 VEDAVEILNQLS-SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ LS G VD A+ + E + P V++ + M L + A D MI R
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR 548
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
G P +YT+L+E L G +EALE+ +++ G+ +A
Sbjct: 549 GCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSA 591
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 133/349 (38%), Gaps = 21/349 (6%)
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
V +++ L ++E + M+ G P+ T L+ R GK +A +I
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY-PVFKEALQTFKVAD 255
++ +G PD N++I CKAGE + +L M + + Y + + + K+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
+ L + P+ I+ +E D + Q + LL
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDS----GVGQAM--------------KLLDE 264
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ D+ D + ++ C R D A+ + ++ +
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTA 433
+ +++ +M + G S V +LI+ L A I +P+ Q + +Y
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
L+ + D+A++ + M +G +P + T+N +L L K G+V DA
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 181/424 (42%), Gaps = 25/424 (5%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY+T+++ F +A+ + + M+++GI Y +++ L + G VD A+ +
Sbjct: 32 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M+ + C P++++YT + L + R+ +A+ + ++MI+ G PN TY L+ +
Sbjct: 92 RDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE----TRTIILILRYMKENRLALR 240
G +EA+ +F++M E PD NILI+ CK + + +++Y E
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ +++ K D + + P + N L ID +
Sbjct: 211 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFN-------------LMID-----MF 252
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K L L + D+ D + +I C R D A E + +
Sbjct: 253 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 312
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y +++ L K + + E+ E + G+ L V + LI L +RR A K+
Sbjct: 313 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 372
Query: 421 LPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ + YT LI + A DK+L + M KG P++ T+++++ L K R
Sbjct: 373 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 432
Query: 479 VSDA 482
V D
Sbjct: 433 VRDG 436
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A+ F ++ RG D +TY M+ A RI + + E M E G D VTY
Sbjct: 258 LDLAYELFQLMT-DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYN 316
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L A VD A ++E ++ + +V+ + + L + R+ +A + +EM +
Sbjct: 317 SIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERN 376
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ YT+L+ +A + +++L FS+M + G P +I+I+K CK+ R
Sbjct: 377 GSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDG 436
Query: 226 ILILRYMKE 234
++L+ M E
Sbjct: 437 CMLLKTMLE 445
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A + FN + + + D FTY ++D + + +R + + M + G + +TY
Sbjct: 153 MDEAVVLFNQMLEN-SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 211
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++M L +G A N+ + M ++C P+ ++ + + ++ A ++++ M R
Sbjct: 212 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 271
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
G P+ YTY +++ RA + ++A ++ +M EAG PD N ++ CKA +
Sbjct: 272 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 6/234 (2%)
Query: 32 DSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
D +T N ++ K P + A L V G + TY T++D ++ +
Sbjct: 171 DVFTYNILIDGYCKQERPQDGAKLLQEMVKY--GCEPNFITYNTLMDSLVKSGKYIDAFN 228
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ ++M + T+ ++ G +D A +++ M + C P I +Y +
Sbjct: 229 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 288
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+R+ +A + + M + G PP+ TY ++ L +A + +EA E++ ++ G D
Sbjct: 289 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 348
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
C+ LI+ CK+ +LR M+ N A + + F AD+ D L
Sbjct: 349 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSL 402
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V R+ G+ D T +T++D +++R+ + + M+ G D V YT ++H A
Sbjct: 337 VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD 396
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+D ++ + EM K C PT+++Y+ + L + RV++ + K M++RG+
Sbjct: 397 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 122/311 (39%), Gaps = 17/311 (5%)
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ VR K +EA ++F PD + LI CKA + + +L M++
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ V+ ++ DS L + + A +T I
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD------MQRHCAPSVITYTI-------- 107
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
LV L K + +L +++ + +T+I C D A++ F ++
Sbjct: 108 -LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN 166
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + Y LI K A++++EM K G L+ L + + + A
Sbjct: 167 SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA 226
Query: 415 AKIFS-LLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ +L D K + T+ +I ++ G D A ++++ M +G P + T+N++++G
Sbjct: 227 FNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISG 286
Query: 473 LEKLGRVSDAE 483
+ R+ DA
Sbjct: 287 ACRANRIDDAR 297
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 179/433 (41%), Gaps = 56/433 (12%)
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
H +TY +++ F +IS + M + G VT +S+++ + + AV +
Sbjct: 80 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 139
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
++M P +++T + LFL+++ EA + M+QRG PN TY V++ L +
Sbjct: 140 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 199
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALR 240
G + AL + +KM+ A ++ D N +I+ CK + + + M+ + +
Sbjct: 200 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 259
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y L ++ + +D + L + + +P ++ N L+
Sbjct: 260 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN------------------ALIDA 301
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+K+ V + L ++ +SI D ++++ C H R D A FE+ V D +
Sbjct: 302 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 361
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI K E+ EM+ G
Sbjct: 362 VVTYNTLIKGFCKSKRVEDGTELFREMSHRG----------------------------- 392
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L D T TYT LI F G D A K++K M G+ P + T+++LL GL G++
Sbjct: 393 -LVGD---TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 448
Query: 480 SDA-EIYRKEKKS 491
A E++ +KS
Sbjct: 449 EKALEVFDYMQKS 461
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I + T N ++ K +E L+ + + RS +
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS--ID 324
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY ++++ F R+ K +FE M K D VTY +++ + V+ +
Sbjct: 325 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 384
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+YT ++ LF + A V+K+M+ G+PP+ TY++L++ L
Sbjct: 385 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 444
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+ALE+F MQ++ ++ D +IE CKAG+
Sbjct: 445 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 482
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 109/214 (50%), Gaps = 1/214 (0%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
N + T+ ++D F + + + +++ M ++ I+ D TY S+++ +D A
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 348
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++E M K+C+P +V+Y +K + RV++ T++++EM RGL + TYT L++ L
Sbjct: 349 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
G + A ++F +M GV PD +IL++ C G+ + + YM+++ + L
Sbjct: 409 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 468
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
++ ++ A + D W + S + + N
Sbjct: 469 IYTTMIEGMCKAGKVDD-GWDLFCSLSLKGVKPN 501
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 112/217 (51%), Gaps = 5/217 (2%)
Query: 22 DLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++K I D +T N ++ H ++KA F ++ F D TY T++ F +
Sbjct: 317 DMIKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCK 374
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+KR+ +F M +G+ D VTYT+++ L + GD D A ++++M P I++
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 434
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y+ + L N ++++A +V+ M + + + Y YT ++E + +AGK ++ ++F +
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 494
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
GV+P+ N +I C + +L+ MKE+
Sbjct: 495 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 531
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 175/432 (40%), Gaps = 17/432 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D T+TT++ + S + + M ++G + VTY V++ L GD D A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+N+ +M+ + +V + + L V +A +++KEM +G+ PN TY+ L+
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G++ +A ++ S M E + P+ N LI+ K G+ + M + +
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F + D D + F EF+ D V T L+
Sbjct: 327 IFTYNSLVNGFCMHDRLD----KAKQMF--EFMVSKDCFPDVVT--------YNTLIKGF 372
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K K + L + + + D+ +T+I+ D A F+ V + +
Sbjct: 373 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 432
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y L+ L K E+ + M K+ L +Y+ +I + A + +F
Sbjct: 433 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 492
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-AGLEKLG 477
L + TY +I S +A + K M G P+ GT+N L+ A L
Sbjct: 493 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 552
Query: 478 RVSDAEIYRKEK 489
+ + AE+ R+ +
Sbjct: 553 KAASAELIREMR 564
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/474 (19%), Positives = 189/474 (39%), Gaps = 20/474 (4%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ K+ S + ++ L I YT N ++ + L + + G+
Sbjct: 54 LSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY 113
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
T +++L+ + KRIS + + M E G D +T+T+++H L AV
Sbjct: 114 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 173
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ + M + C P +V+Y + L A ++ +M + + + +++ L
Sbjct: 174 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 233
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ ++AL +F +M+ G++P+ + LI C G +L M E ++
Sbjct: 234 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 293
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
F + F + E + D+ + DI S+ G +
Sbjct: 294 TFNALIDAF----------VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM---- 339
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR-RDGALLAFEYSVKMDLNLERT 361
L + ++ K D +T+I+ C +R DG L E S + L +
Sbjct: 340 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTV 398
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y LI L ++ ++M G + ++L+ L + + A ++F +
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458
Query: 422 --PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
E + YT +I AG D ++ ++ KG+ P++ T+N +++GL
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 512
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY+ +LD ++ VF+ MQ+ I +D YT+++ + AG VD
Sbjct: 425 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 484
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +V+Y + L ++EA + K+M + G PN TY L+
Sbjct: 485 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 544
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G + E+ +M+ C G+ TI L+ + + RL
Sbjct: 545 RAHLRDGDKAASAELIREMRS----------------CRFVGDASTIGLVANMLHDGRL 587
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 161/394 (40%), Gaps = 36/394 (9%)
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
++ +A ++ M++ P+ + L+ + + K++ + + KMQ + N
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 211 ILIEKCCKAGE-TRTIILILRYMK---ENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
ILI C+ + + + L+ + MK E + + +++D + V
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 267 QFSPEFIS-------------DNDAVEFVTTDIE---GPLSIDQGLVLILLKKKNLVAID 310
+ P+ I+ ++AV V ++ P + G+V+ L K+ +
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 311 -SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+LL+ + I+ D + +TII+ C +R D AL F+ + Y +LI
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPE 423
L + ++++ +M + + + LI + V A K++ S+ P+
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA- 482
TY +L+ + DKA ++++ M K P + T+N L+ G K RV D
Sbjct: 327 ----IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382
Query: 483 EIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
E++R+ + L D V I L + GD
Sbjct: 383 ELFRE----MSHRGLVGDTVTYTTLIQGLFHDGD 412
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 219/523 (41%), Gaps = 32/523 (6%)
Query: 10 KILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W S A+ ++ L +K D V+QVL + FF W + + F HD T
Sbjct: 67 RILKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHFQHDSTT 126
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ E+ + M + M ++ ++ ++ L A V+ A++++ ++K
Sbjct: 127 YMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIK 186
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKY 187
++C PT Y + +L ++ ++Y E+ G P+ TY+ L+ + +Y
Sbjct: 187 GRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERY 246
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVF 244
+ A +F +M+E G+ P + ++ K + + ++ MK A Y
Sbjct: 247 DFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTEL 306
Query: 245 KEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFV--TTDIEGPLSIDQGLVLILL 301
+ L D+ SL + + P+ + N+ + + +E L + G + L
Sbjct: 307 IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKL-FGKMDSLQ 365
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVI-----------------STIIEVNCDHRRRDGA 344
N+V ++++ I + A + + +I+ C R + A
Sbjct: 366 CAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKA 425
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
LL E + AY +LI L + + E+ +E+ + + A++I
Sbjct: 426 LLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKH 485
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
G+ R A +F E C+ TY AL+ AG D+A + + M G P
Sbjct: 486 FGNCGRLSDAVDLFCEX-EKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTP 544
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ + N++L GL K G A E++ K K+S I DA+S + +
Sbjct: 545 DIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTI 587
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA L + +GF Y +++D G AKR + +F+ ++E A Y
Sbjct: 422 VEKALLLLEEMDE-KGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYA 480
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ N G + AV+++ E + C P + +Y A M + + EA + + M +
Sbjct: 481 VMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMREN 540
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ ++ +++ L + G + A+E+F+KM+E+ + PD + N ++ +AG
Sbjct: 541 GCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMA 600
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
++R MK + L+ DE+ S
Sbjct: 601 AKLMREMKLKGFEYDSITYSSILEAVGKVDEDCS 634
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 161/398 (40%), Gaps = 51/398 (12%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF + G+ + +Y +M+ L G + A ++ M+ K C P +VSYT +
Sbjct: 97 VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYC 156
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+++ + KEM +GL PN YTY+ ++ L ++GK E ++ +M + GV PD
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
LI+ CK G T+ Y +F E
Sbjct: 217 IYTTLIDGFCKLGNTQAA---------------YKLFSE--------------------M 241
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+ E + D+ A + + G + V D L + ++ K + D
Sbjct: 242 EAREIVPDSIAFSALICGLSGSGKV--------------VEADKLFNEMIKKGFEPDEVT 287
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I+ C A V++ L Y AL L K E++ EM
Sbjct: 288 YTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMC 347
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
+ G L + +++ L A + A K+ + E T TYT L+ Y+ G
Sbjct: 348 RKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMV 407
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
KA ++ + M +G+ P++ TFNVL+ GL G++ D E
Sbjct: 408 KARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 189/431 (43%), Gaps = 32/431 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +++ +I ++ M+ KG D V+YT+++ + G++ V + +EM
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM 171
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+LK P + +Y++ + +L + +V E V +EM++RG+ P+ YT L++ + G
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNT 231
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ A ++FS+M+ + PD A + LI C +G + + + ++L F E
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALI--CGLSGSGKVV-------EADKL------FNEM 276
Query: 248 LQTFKVADENDSLLWQV-------HPQFSPEFISDNDAVEF-VTTDIEGPLSIDQGLVLI 299
+ K E D + + + F N V+ +T ++ ++ GL
Sbjct: 277 I---KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC-- 331
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K L + LL + K +QL+ + +TI+ C A+ E + L+ +
Sbjct: 332 --KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPD 389
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y L+ K K E++ EM G V +L++ L + + ++
Sbjct: 390 TITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449
Query: 420 LLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ATY +++ Y + + +IY+ MC +G+ P T+N+L+ G K
Sbjct: 450 WMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509
Query: 478 RVSDAEIYRKE 488
+ +A KE
Sbjct: 510 NMKEAWFLHKE 520
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 157/354 (44%), Gaps = 25/354 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D YTT++D F + + +F M+ + I D++ +++++ LS +G V
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM K P V+YTA + +K+A ++ +M+Q GL PN TYT L +
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
L ++G+ + A E+ +M G+Q + + N ++ CKAG + ++ MKE L
Sbjct: 329 GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388
Query: 238 -ALRYPVFKEA-LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y +A +T ++ + L + P ++ N + + + G L +
Sbjct: 389 DTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC--MSGKLEDGER 446
Query: 296 LVLILLKK-------------------KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
L+ +L+K N+ + G+ + + DS + +I+ +C
Sbjct: 447 LLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHC 506
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
R A + V+ NL ++Y ALI K + ++ EEM + G
Sbjct: 507 KARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG 560
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M+KA+ N + + G + TYT + D ++ + + + M KG+ ++ TY
Sbjct: 301 MKKAFFLHNQMVQI-GLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYN 359
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ L AG++ AV + EEMK +P ++YT M + + +A ++ +EM+ R
Sbjct: 360 TIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDR 419
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P T+ VLM L +GK E+ + M E G+ P+ A N ++++ C R
Sbjct: 420 GLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIS 479
Query: 226 ILILRYM 232
I R M
Sbjct: 480 TEIYRGM 486
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 99/211 (46%), Gaps = 9/211 (4%)
Query: 11 ILKYSTWDSAQDLL-----KNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ K D+A +LL K L + +Y VN + K ++ L + G +
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEM--KEAGLH 387
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D TYTT++D + + + + + M ++G+ VT+ +M+ L +G ++ +
Sbjct: 388 PDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERL 447
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ M K P +Y + MK + + ++ +T++Y+ M +G+ P+ TY +L++ +
Sbjct: 448 LKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCK 507
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A +EA + +M E ++ N LI+
Sbjct: 508 ARNMKEAWFLHKEMVEKRFNLTASSYNALIK 538
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG T+ +++ + ++ + + + M EKGI +A TY S+M ++
Sbjct: 419 RGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRI 478
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ I+ M + P +Y +K +KEA ++KEM+++ +Y L++
Sbjct: 479 STEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIK 538
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ K EA ++F +M+ G+ N+ ++ + G T +
Sbjct: 539 GFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTL 585
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY +++ + + ++ M +G+ D+ TY ++ A ++
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKE 513
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +EM K T SY A +K F ++ EA +++EM + GL + Y + ++
Sbjct: 514 AWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
G E LE+ C+ IEKC
Sbjct: 574 MNYEEGNMETTLEL---------------CDEAIEKC 595
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 183/424 (43%), Gaps = 59/424 (13%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY M+ + +A I++ V + M ++ D VTY +++ L ++G + A+ +
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M ++CYP +++YT ++ + V A + EM RG P+ TY VL+ + +
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ +EA++ + M +G QP+ NI++ C G R+M +L
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG---------RWMDAEKL------- 331
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+AD + FSP ++ N + F L +K
Sbjct: 332 --------LAD-------MLRKGFSPSVVTFNILINF-------------------LCRK 357
Query: 305 NLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
L+ AID +L + Q +S + ++ C ++ D A+ E V +
Sbjct: 358 GLLGRAID-ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLL 421
Y ++ L K EI+ +++ G S + +I L A + A K+ +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 422 PEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+D K T TY++L+G G D+A+K + R GI P+ TFN ++ GL K R +
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK-SRQT 535
Query: 481 DAEI 484
D I
Sbjct: 536 DRAI 539
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 2/208 (0%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYT 70
K ++A +L + + D T N +L++ K + R R D TYT
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+++ + + + M+++G D VTY +++ + G +D A+ +M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P ++++ ++ + R +A + +M+++G P+ T+ +L+ +L R G A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCK 218
++I KM + G QP+ + N L+ CK
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A N +S S+G + TY T++D +A + + + M+ K + D +TY+
Sbjct: 430 VEDAVEILNQLS-SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ LS G VD A+ + E + P V++ + M L + + A D MI R
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
G PN +YT+L+E L G +EALE+ +++ G+ +A
Sbjct: 549 GCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 180/461 (39%), Gaps = 77/461 (16%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TT++ F + + E+++ G D +TY ++ AG+++ A+++
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M + P +V+Y ++ L + ++K+A +V M+QR P+ TYT+L+E R
Sbjct: 196 DRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN----RLALR 240
A+++ +M++ G PD N+L+ CK G I L M + +
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + T + D L + FSP ++ N + F+ +G L G + +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR--KGLL----GRAIDI 366
Query: 301 LKK-------KNLVAIDSLLSGI-----MDKSIQL-----------DSAVISTIIEVNC- 336
L+K N ++ + LL G MD++I+ D +T++ C
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 337 DHRRRDGALLAFEYSVK----------------------------------MDLNLERTA 362
D + D + + S K DL +
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +L+G L + + + E + G V ++++ S R A F +
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS--RQTDRAIDFLVF 544
Query: 422 PEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
++ C +YT LI G A +AL++ +C KG+
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/394 (18%), Positives = 150/394 (38%), Gaps = 26/394 (6%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
++ G+N A + ++ SN+ ++ L++ V +++ +
Sbjct: 63 VESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALED-----VESNNHLRQMVRTGE 117
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
++E + M+ G P+ T L+ R GK +A +I ++ +G PD N+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRY-PVFKEALQTFKVADENDSLLWQVHPQFSP 270
+I CKAGE + +L M + + Y + + + K+ + L + P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ I+ +E D G+ + LL + D+ D +
Sbjct: 238 DVITYTILIEATCR--------DSGVGHAM----------KLLDEMRDRGCTPDVVTYNV 279
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
++ C R D A+ + ++ + + +++ +M + G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKAL 448
S V +LI+ L A I +P+ Q + +Y L+ + D+A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + M +G +P + T+N +L L K G+V DA
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/502 (22%), Positives = 202/502 (40%), Gaps = 60/502 (11%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF---GEAKRISSMKYVFELM 92
V++VL+ + A +FF W RGF H FT L G + RI +M FE M
Sbjct: 96 VSRVLQRLKDPQTAIVFFVWAG-DRGFKHSTFTRNCFLQTLLENGSSDRIPAM---FERM 151
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ G D+ TY V+ L +D A + ++ K++ P + YT + R+
Sbjct: 152 LDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRL 211
Query: 153 KEATDVY-------------------------------KEMIQRGLPPNCYTYTVLMEYL 181
K+A +++ KEM +R + P+ +TY +L++ L
Sbjct: 212 KDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGL 271
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+A K ++A E+ +M + GV PD N +++ CKAG+ +L M E
Sbjct: 272 CKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSC 331
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL- 300
+ + D V S F+ D + + ID+ L+
Sbjct: 332 CTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKE 391
Query: 301 LKKK----NLVAIDSLLSGIM-----DKSIQLDSAVIST-----------IIEVNCDHRR 340
+ K NLV ++L+ G+ +K+ +L +++S+ I++ C R
Sbjct: 392 MSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGR 451
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D AL E +K Y AL+ L + + I +EM +
Sbjct: 452 LDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVS 511
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
L++ + R A K+ + Y AL+ Y G D+ +++ M +G
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGI-RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCV 570
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P++ T+N+++ GL K G+V +A
Sbjct: 571 PNIKTYNIVMDGLCKHGKVDEA 592
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 173/420 (41%), Gaps = 60/420 (14%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++D + + R+ + VFE M +G + TY VM L G VD A E M
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P +VSY + LF + KEA V +MIQ G+PP+ TY LM + +++
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 660
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
+A+ I M +AGV PD N LI +G ++T NRL Y + E L
Sbjct: 661 DAVGILKNMIKAGVDPDNVTYNTLI-----SGLSQT----------NRLGDAYELMHEML 705
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+ V + N ++ + EG L K+ L+
Sbjct: 706 RNGCVVSACTTY---------------NTIIDRLCK--EGCL------------KQALLL 736
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA--LLAFEYSVKMDLNLERTAYLAL 366
+D + ++ ++ + I+ C R D A LL+ +MD + +Y +
Sbjct: 737 MDHMTG----HGVEANTVTYNIFIDRLCKEGRLDEASSLLS-----EMDTLRDEVSYTTV 787
Query: 367 IGILIKLNTFPKVAEIVEEMTKA-GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
I L K + +++ EM G + + LLI +R A + L+ + +
Sbjct: 788 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQ-R 846
Query: 426 KCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
C+ TY +I DKA +++ M +GI S ++ VL+ GL GR +A
Sbjct: 847 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 906
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 178/463 (38%), Gaps = 70/463 (15%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAG 115
S GF D TY+ + D + RI FEL++E KG + VTY +++ L A
Sbjct: 359 SSGFVPDVVTYSILADGLCKRGRIDE---AFELVKEMSGKGCTPNLVTYNTLIDGLCKAS 415
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A + E + P +V+YT + L R+ +A + + M++RG P+ TYT
Sbjct: 416 KTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYT 475
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI---------- 225
LME L R G+ +EA IF +M D A L+ CK+ T+
Sbjct: 476 ALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT 535
Query: 226 -------ILILRYMKENRLALRYPVFKEA--------LQTFKVADENDSLLWQVHPQFSP 270
L+ Y KE RL VF++ ++T+ + + +V F
Sbjct: 536 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP- 594
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
F+ + V + + ID L K +L ++ I D+ +T
Sbjct: 595 -FLESMHSAGCVPDVVSYNIIIDG-----LFKASKPKEARQVLDQMIQAGIPPDAVTYNT 648
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
++ C R D A+ + +K ++ + Y LI L + N E++ EM + G
Sbjct: 649 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 708
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+ CT TY +I G +AL +
Sbjct: 709 CVVSA-------------------------------CT-TYNTIIDRLCKEGCLKQALLL 736
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
M G+ + T+N+ + L K GR+ +A E +++
Sbjct: 737 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR 779
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L H +++A+ F + S G D +Y ++D +A + + V + M + GI
Sbjct: 583 LCKHGKVDEAFPFLESM-HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 641
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
DAVTY ++M D AV I + M P V+Y + L +R+ +A ++
Sbjct: 642 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 701
Query: 160 KEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
EM++ G + C TY +++ L + G ++AL + M GV+ + NI I++ CK
Sbjct: 702 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 761
Query: 219 AG 220
G
Sbjct: 762 EG 763
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 64 HDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D +YTT++ +A+++ + K E++ KG+ I + T+ ++ + +D A+
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 838
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M + C P++++Y + L D+V +A +++ EM RG+ + +YTVL+ L
Sbjct: 839 LLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLC 898
Query: 183 RAGKYEEALEIFSKMQEAGVQPD 205
G+ +EAL++ +M + + D
Sbjct: 899 GQGRGKEALQVLEEMASSDCEID 921
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 8/220 (3%)
Query: 17 WDSAQDLLKNLPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
++ ++L+N + T N + L +++A L + ++ G + TY +
Sbjct: 698 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT-GHGVEANTVTYNIFI 756
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKEC 132
D + R+ L+ E D V+YT+V+ L A +D A + EM +K
Sbjct: 757 DRLCKEGRLDEAS---SLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 813
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
T ++ + R+ EA + M+QRG P+ TY +++ L + K ++A E
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWE 873
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+F +M G+ + +LI C G + + +L M
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 198/448 (44%), Gaps = 26/448 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N D F + ++ F + + + V++ M E G D V+Y ++H L+ G +D +
Sbjct: 40 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 99
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I EM ++ P++ +Y++ ++ L RV A+ ++ EMI+ G P+ + L+
Sbjct: 100 LKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILG 159
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
L +AGK ++A E F +M + G QP+ N+L+ C +G+ + MK + +
Sbjct: 160 LCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPD 219
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFV--TTDIEGPLSIDQ 294
+ Y +A+ + +E L + + P I+ + + + T ++E L +
Sbjct: 220 VVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF- 278
Query: 295 GLVLILLKKKNLVAIDSLLSGIM--DKSIQL--------------DSAVISTIIEVNCDH 338
G +L K N +L+SG+ +K IQ D+ +++I C
Sbjct: 279 GSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 338
Query: 339 RRRDGA-LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
D A L E S L + LI KL + E+V EM G +
Sbjct: 339 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCT 398
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMC 455
+LI L A + A +++ + E + + + +G G+ D+A +++
Sbjct: 399 YRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATR 458
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ G P+ TF +L L KLGRV DA+
Sbjct: 459 KSGAVPNPETFRILSESLIKLGRVEDAQ 486
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 173/420 (41%), Gaps = 35/420 (8%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M++K I + TY+S++ L + + + EEM C P + ++ M+ ++
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+++A +VY+ M++ G P+ +Y +L+ L + GK +E+L+I S+M G P A +
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 212 LIEKCCKAGETRTIILILRYM-----KENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
L+ KA + M +RL Y + Q KV D ++
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMF-YELILGLCQAGKVKDASERF-----K 174
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
Q N V V L+ L L ++L + + S D
Sbjct: 175 QMPKHGCQPNVPVYNV-------------LLHGLCSSGQLEQANTLFAEMKSHSCSPDVV 221
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+T+++ C RR + FE + LI L + K E+ M
Sbjct: 222 TYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM 281
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-----SLLPEDQKCTATYTALIGVYFSA 441
+AG Y LI L A + + A ++F + +P D Y +LI Y
Sbjct: 282 LEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPD---AVAYNSLIAGYCKR 338
Query: 442 GSADKALKIYKTMC-RKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
GS D+A K+Y+ M G+ P++ TFN L+ G KLG++ A + K + AD+ +
Sbjct: 339 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCT 398
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 60 RGFNH-DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG +H DR + ++ +A ++ F+ M + G + Y ++H L ++G ++
Sbjct: 143 RGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLE 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EMK C P +V+Y + + RV+E +++ M G PN T++ L+
Sbjct: 203 QANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLI 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L R G+ E+ALE+F M EAG +P+K LI C+A
Sbjct: 263 HGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRA 303
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F + +S + D TY T+LD +A+R+ +FE M+ G + +T++
Sbjct: 201 LEQANTLFAEM-KSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFS 259
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H L G+++ A+ ++ M C P +YT + L ++V +A +++++M Q
Sbjct: 260 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQA 319
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ-EAGVQPDKAACNILIEKCCKAGE 221
+PP+ Y L+ + G +EA +++ +M AG+QP N LI+ CK G+
Sbjct: 320 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGK 376
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 75/149 (50%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A + +S G T+ T++D F + ++ + M KG+ D+ TY
Sbjct: 341 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYR 400
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ LS A +D A+ ++++M+ K+ VS +++ L + +A V++ +
Sbjct: 401 ILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKS 460
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
G PN T+ +L E L++ G+ E+A ++
Sbjct: 461 GAVPNPETFRILSESLIKLGRVEDAQKLM 489
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 209/506 (41%), Gaps = 37/506 (7%)
Query: 11 ILKYSTWDSAQDLLKN---LPIKWDSYTVNQVLKTHPPME---KAWLFFNWVSRSRGFNH 64
+L+ + D A DL N L ++ +YT ++ H KA F + ++RG
Sbjct: 414 LLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKM-KARGIAP 472
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ L E R+ K +F ++ G+ D+VTY +M S G VD A+ +
Sbjct: 473 NIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLL 532
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM +C P ++ + + L+ RV+EA ++ M + L P TY +L+ L +
Sbjct: 533 SEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKE 592
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ ++A+++F M G P+ N L++ CK E + + M F
Sbjct: 593 GQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTF 652
Query: 245 KEALQTFKVADENDSLLWQVHPQ---FSPEFISDNDAVEFV--TTDIEGPLSIDQGLVLI 299
+ F ++ + +W H P+ ++ + V + IE I +
Sbjct: 653 NTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQ 712
Query: 300 LLKKKNLVAIDSLLSGIMD----------------KSIQLDSAVISTIIEVNCDHRRRDG 343
+ + + ++ GI+ ++I D +V+ II+V C H++
Sbjct: 713 VGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSV 772
Query: 344 ALLAF-EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A F +++ ++ + Y LI ++++ + EEM AG + + LI
Sbjct: 773 ARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLI 832
Query: 403 HRLGSARRPVPAAKIFSLLPE--DQKC---TATYTALIGVYFSAGSADKALKIYKTMCRK 457
G + + ++F L E + C T TY +I + DKA+ +Y +
Sbjct: 833 DAHGKSGK---INELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSG 889
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAE 483
P+ TF L+ GL K GR+ DA
Sbjct: 890 DFSPTPCTFGPLIDGLLKSGRLDDAH 915
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 184/479 (38%), Gaps = 67/479 (13%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ--------------- 93
A +F V H T ML+I +R+ M +VF+LMQ
Sbjct: 107 ALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIF 166
Query: 94 --------------------EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
E G ++A +Y ++H+L +G A+ ++ M +
Sbjct: 167 KSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLK 226
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P++ +++A M +K + +EM GL PN YTYT+ + L R GK +EA I
Sbjct: 227 PSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRI 286
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
+M + G PD +LI+ C A + + + MK + + L F
Sbjct: 287 MKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSD 346
Query: 254 ADENDSL--LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
D + +W E +D A + VT I LV L K +
Sbjct: 347 CGHLDKVEKIWT-------EMEADGYAPDVVTFTI---------LVNALCKAGRINEAFD 390
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA--YLALIGI 369
LL + + + + +T+I R D AL F S L +E TA Y+ LI
Sbjct: 391 LLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF--SNMESLGVEPTAYTYILLIDY 448
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLG-VYLGALL-----IHRLGSARRPVPAAKIFSLLPE 423
K K E E+M G + V A L + RLG A+ K L P+
Sbjct: 449 HGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPD 508
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ TY ++ Y G D+A+K+ M + P + N L+ L K GRV +A
Sbjct: 509 ----SVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 169/381 (44%), Gaps = 29/381 (7%)
Query: 33 SYTV-NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
+YTV L T ++ A F + +S D+ TY T+LD F + + ++ ++
Sbjct: 301 TYTVLIDALCTARKLDDAMCLFTKM-KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTE 359
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ G D VT+T +++ L AG ++ A ++ + M+ + P + +Y + L +R
Sbjct: 360 MEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANR 419
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ +A D++ M G+ P YTY +L++Y ++G +ALE F KM+ G+ P+ ACN
Sbjct: 420 LDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNA 479
Query: 212 LIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHP-Q 267
+ + G + +K + LA + Y + + DE LL ++ Q
Sbjct: 480 SLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ 539
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL----VAIDSLLSGI-----MD 318
P+ I N ++ T + + + +++ NL V + LL+G+ +
Sbjct: 540 CEPDVIVINSLID---TLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQ 596
Query: 319 KSIQL-----------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
K++QL ++ +T+++ C + D AL F M+ + + +I
Sbjct: 597 KAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTII 656
Query: 368 GILIKLNTFPKVAEIVEEMTK 388
IK N + +M K
Sbjct: 657 HGFIKQNQIKNAIWLFHQMKK 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 97/185 (52%), Gaps = 2/185 (1%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
++ L+ H +E AW F + +S G D FTY +++D G++ +I+ + +++ M +
Sbjct: 797 IDGFLEVHN-VEVAWNLFEEM-KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTR 854
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G + +TY V+ L + +D A++++ + + PT ++ + L + R+ +A
Sbjct: 855 GCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDA 914
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+++ M+ G PN Y +L+ + G + A E F +M + G++PD + IL++
Sbjct: 915 HEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDI 974
Query: 216 CCKAG 220
C AG
Sbjct: 975 LCIAG 979
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 167/429 (38%), Gaps = 55/429 (12%)
Query: 42 THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEKGINID 100
T EKA LF + R D ++ + + K+ S + VF + +E G+
Sbjct: 731 TEAGTEKAILFGERLV-CRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPT 789
Query: 101 AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK 160
Y ++ +V+ A N++EEMK C P +Y + + + ++ E D+Y
Sbjct: 790 LKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYD 849
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
EM+ RG PN TY +++ LV++ + ++A++++ + P LI+ K+G
Sbjct: 850 EMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSG 909
Query: 221 ETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE 280
++ D ++ VH P N A+
Sbjct: 910 -------------------------------RLDDAHEMFDGMVHYGCRP-----NSAIY 933
Query: 281 FVTTDIEGPLS-IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ + G L +D ++ + I+ D + ++++ C
Sbjct: 934 NILVNGYGKLGHVDTAC--------------EFFKRMVKEGIRPDLKSYTILVDILCIAG 979
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R D AL FE + L+ + AY +I L + + + EM G +Y
Sbjct: 980 RVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN 1039
Query: 400 LLIHRLGSARRPVPAAKIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
LI LG A KI+ L + TY ALI Y +G+++ A IYK M
Sbjct: 1040 SLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVG 1099
Query: 458 GIHPSLGTF 466
G P+ GTF
Sbjct: 1100 GCDPNTGTF 1108
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
+VL H A F ++ G Y ++D F E + +FE M+ G
Sbjct: 762 KVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGC 821
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
D TY S++ +G ++ ++++EM + C P ++Y + L ++R+ +A D
Sbjct: 822 APDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMD 881
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+Y ++ P T+ L++ L+++G+ ++A E+F M G +P+ A NIL+
Sbjct: 882 LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYG 941
Query: 218 KAGETRTIILILRYM 232
K G T + M
Sbjct: 942 KLGHVDTACEFFKRM 956
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 186/466 (39%), Gaps = 44/466 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+AW F + TY +L G+ +I +FE M G + + +T+
Sbjct: 560 VEEAWQMFCRMEEMN-LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFN 618
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L +VD A+ ++ +M C P ++++ + +++K A ++ +M ++
Sbjct: 619 TLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KK 677
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM-QEAGVQPDKA-----ACNILIEKCCKA 219
L P+ T L+ ++++G+ E+A I + G D++ IL E A
Sbjct: 678 LLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTE----A 733
Query: 220 GETRTII----LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
G + I+ L+ R + ++ L P+ K + K S+ V +F+ E
Sbjct: 734 GTEKAILFGERLVCRAICKDDSVL-IPIIKVLCKHKKT-----SVARNVFVKFTKEL--- 784
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
++ L + L+ L+ N+ +L + D+ +++I+ +
Sbjct: 785 ---------GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAH 835
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS--- 392
+ + ++ + Y +I L+K N K ++ + S
Sbjct: 836 GKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTP 895
Query: 393 --LGVYLGALLIH-RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALK 449
G + LL RL A + P +A Y L+ Y G D A +
Sbjct: 896 CTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPN----SAIYNILVNGYGKLGHVDTACE 951
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
+K M ++GI P L ++ +L+ L GRV DA Y ++ K D
Sbjct: 952 FFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD 997
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 179/452 (39%), Gaps = 40/452 (8%)
Query: 50 WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVM 108
WLF R D T T+L ++ +I + + + + G NID + VM
Sbjct: 670 WLFHQMKKLLR---PDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVM 726
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GL 167
+ + A+ E + + +K+L + + A +V+ + + G+
Sbjct: 727 GGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGV 786
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII- 226
P Y +L++ + E A +F +M+ AG PD N LI+ K+G+ +
Sbjct: 787 KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFD 846
Query: 227 ----LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
++ R K N + V +++ ++ D V FSP
Sbjct: 847 LYDEMLTRGCKPNTITYNM-VISNLVKSNRLDKAMDLYYNLVSGDFSP------------ 893
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
T GPL ID LLK L + G++ + +SA+ + ++ D
Sbjct: 894 TPCTFGPL-IDG-----LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVD 947
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A F+ VK + + +Y L+ IL E++ +AG + L+I
Sbjct: 948 TACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMI 1007
Query: 403 HRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
+ LG ++R A +F ++P+ TY +LI G ++A KIY+ +
Sbjct: 1008 NGLGRSQRTEEALSLFHEMQNRGIVPD----LYTYNSLILNLGIVGMIEEAGKIYEELQF 1063
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
G+ P++ T+N L+ G G A IY+K
Sbjct: 1064 IGLKPNVFTYNALIRGYTLSGNSELAYGIYKK 1095
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 6 SNVYKIL-----KYSTWDSAQDLLKNL---PIKWD--SYTV-NQVLKTHPPMEKAWLFFN 54
S +Y IL K D+A + K + I+ D SYT+ +L ++ A +F
Sbjct: 930 SAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFE 989
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
+ ++ G + D Y M++ G ++R +F MQ +GI D TY S++ L
Sbjct: 990 KLKQA-GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIV 1048
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G ++ A I+EE++ P + +Y A ++ L+ + A +YK+M+ G PN T+
Sbjct: 1049 GMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Query: 175 TVL 177
L
Sbjct: 1109 AQL 1111
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 206/502 (41%), Gaps = 44/502 (8%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRG 61
+ + ++L+ + LL +LP D+ + N VL + ++ A ++
Sbjct: 51 ARLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHET- 109
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+YTT++ +R + MQ G+ D VTY +++ L +A DVD AV
Sbjct: 110 -RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAV 168
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EM P +V Y+ ++ R + + V++EM RG+ P+ YT L++ L
Sbjct: 169 ELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSL 228
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL-- 239
R GK ++A ++ KM E G++P+ N+LI CK G + + + M E +AL
Sbjct: 229 CREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDA 288
Query: 240 -RYPVFKEALQTFKVADENDSLLWQ-VHPQ--FSPEFISDNDAVE-----------FVTT 284
Y L DE LL + +H + P ++ N + F
Sbjct: 289 VTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR 348
Query: 285 DIEGPLSIDQGLVLI------LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
D+ LV LL+ + L+ + ++ DS S +I C
Sbjct: 349 DMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKM 408
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ D A + + E Y+ L+ L + + +EM K L V
Sbjct: 409 WQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAY 467
Query: 399 ALLIHRLGSAR-RPVPAAKIF-------SLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+ +IH G+ R R +A+ F L+P+ + TY+ LI ++ ++G A ++
Sbjct: 468 STMIH--GACRLRDRKSAEEFLKHMLDEGLIPD----SVTYSMLINMFANSGDLGAAERV 521
Query: 451 YKTMCRKGIHPSLGTFNVLLAG 472
K M G P + F+ L+ G
Sbjct: 522 LKQMTASGFVPDVAVFDSLIKG 543
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 188/462 (40%), Gaps = 62/462 (13%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFEL 91
S +N++L+ P E L + S D +Y T+L + + + + ++ +
Sbjct: 50 SARLNRLLRLVPLPESPALLSSLPSV-----RDAVSYNTVLAALCRQGGCLDAALFLLRV 104
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M + AV+YT++M L AV + +M+ P +V+Y ++ L
Sbjct: 105 MAHE-TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAAD 163
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V +A ++ +EM + G+ PN Y+ L++ +AG++E ++F +M G++PD
Sbjct: 164 VDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTG 223
Query: 212 LIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
LI+ C+ G+ + ++ M E L + Y V ++ E SL + +
Sbjct: 224 LIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKG 283
Query: 269 SPEFISDNDAVEFVT--TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
DAV + T T + G L +D+ + L ++ ++ G + ++ +
Sbjct: 284 VAL-----DAVTYNTLITGLSGVLEMDEAMGL----------LEEMIHG--ETMVEPNVV 326
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+++I C R A + + + LIG L++++ K E+++EM
Sbjct: 327 TFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEM 386
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
+G L P+ + TY+ LI + D+
Sbjct: 387 ASSG-----------------------------LEPD----SFTYSILINGFCKMWQVDR 413
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
A + M R GI P L + LLA L + G + A + E
Sbjct: 414 AESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE 455
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 6/237 (2%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+ +L+ H ++KA + ++ S G D FTY+ +++ F + ++ + + M+
Sbjct: 367 IGGLLRVHK-VKKAMELMDEMASS-GLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRD 424
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK-ILFLNDRVKE 154
GI + V Y ++ L G ++ A N ++EM K C +V+Y+ + L DR K
Sbjct: 425 GIEPELVHYIPLLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDR-KS 482
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A + K M+ GL P+ TY++L+ +G A + +M +G PD A + LI+
Sbjct: 483 AEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIK 542
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
G+T ++ ++R M +AL + + T VA+ L Q P F E
Sbjct: 543 GYGAKGDTEKVLELIREMTAKDIALDSKIIS-TIYTCLVANNEGKALLQSVPGFDTE 598
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 204/488 (41%), Gaps = 27/488 (5%)
Query: 20 AQDLLKNLPIKWDSYT-VNQVLKTHPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFG 77
A D + P SY+ V T ++K + LF + R G D TYTT++D
Sbjct: 188 ADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDR--GIPPDVVTYTTVIDGLC 245
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+A+ + VF+ M + G + TY ++H + G V + EEM + P
Sbjct: 246 KAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCY 305
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + + L N R +EA + MI++G+ P TY +L+ G E M
Sbjct: 306 TYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLM 365
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVA 254
E G+ PD NI K G + I M+++ L+ + Y +AL
Sbjct: 366 VENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRV 425
Query: 255 DENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLS-------IDQGL----VLILLK 302
D+ + Q ++ +P + N V + T + + +DQG+ V
Sbjct: 426 DDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485
Query: 303 KKNLVAIDSLLSG-----IMDK-SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
NL + ++ G +M+ ++ D+ + +I C R D A F+ V + L
Sbjct: 486 ICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGL 545
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y L+ + + EM + G + GV ++H L +R A +
Sbjct: 546 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605
Query: 417 IF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
++ +++ KC TY ++ + D+A K+++++C KG+ ++ TF +++ L
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665
Query: 475 KLGRVSDA 482
K GR DA
Sbjct: 666 KGGRKEDA 673
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 194/470 (41%), Gaps = 28/470 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTY 104
+E + F + ++ G+ D +L KR+ +M + + M E G D V+Y
Sbjct: 106 LEHGFAAFGLILKT-GWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSY 164
Query: 105 TSVMHWLSNAGDVDGAVNIWEEM---KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
T ++ L N + A+ + M + C P +VSY+ + F +V + +++ E
Sbjct: 165 TILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLE 224
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
MI RG+PP+ TYT +++ L +A ++ A +F +M + G +P+ N LI G+
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK 284
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADEN-------DSLLWQ-VHPQFSPEFI 273
+ ++ +L M L + L DS++ + + P+ S I
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344
Query: 274 ---------SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ-- 322
+ ++ F+ +E LS D + I + I +K Q
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404
Query: 323 LDSAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
L V++ +I+ C R D A + F + + + +L+ L ++ + +
Sbjct: 405 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 464
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVY 438
E+V EM G LI L + R + ++ L+ + +YT LI Y
Sbjct: 465 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 524
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G D+A K++ M G+ P+ T+N LL G R+ DA +E
Sbjct: 525 CLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE 574
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D F+YT ++ + R + VF+ M G++ VTY +++H +A +D A
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM K P +V+Y + LF R EA ++Y MI G + YTY +++
Sbjct: 569 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 628
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--- 237
L ++ +EA ++F + G+Q + I+I K G + + + N L
Sbjct: 629 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 688
Query: 238 ALRYPVFKEALQTFKVADENDSLL 261
+ Y + E L +E DSL
Sbjct: 689 VVTYRLVAENLIEEGSLEEFDSLF 712
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 7/226 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A+ F + R +G TY T+L + KR S K ++ M G D TY
Sbjct: 565 IDDAYCLFREMLR-KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 623
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L + VD A +++ + K I+++T + L R ++A D++ +
Sbjct: 624 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 683
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN TY ++ E L+ G EE +FS M++ G P+ N L+ + G+
Sbjct: 684 GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L + E ++ + F +DE +Q H + PE
Sbjct: 744 GAYLSKLDERNFSVEASTTSLLMSIF-TSDE-----YQHHAKSLPE 783
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 220/523 (42%), Gaps = 32/523 (6%)
Query: 10 KILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W S A+ ++ L +K D V+QVL + FF W + + F HD T
Sbjct: 67 RILKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHFQHDSTT 126
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ E+ + M + M ++ ++ ++ L A V+ A++++ ++K
Sbjct: 127 YMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIK 186
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKY 187
++C PT Y + +L ++ ++Y E+ G P+ TY+ L+ + +Y
Sbjct: 187 GRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERY 246
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVF 244
+ A +F +M+E G+ P + ++ K + + ++ MK A Y
Sbjct: 247 DFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTEL 306
Query: 245 KEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFV--TTDIEGPLSIDQGLVLILL 301
+ L D+ SL + + P+ + N+ + + +E L + G + L
Sbjct: 307 IKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKL-FGKMDSLQ 365
Query: 302 KKKNLVAIDSLLSGIMD-----------------KSIQLDSAVISTIIEVNCDHRRRDGA 344
N+V ++++ I + I S + +I+ C R + A
Sbjct: 366 CAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKA 425
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
LL E + AY +LI L + + E+ +E+ + + A++I
Sbjct: 426 LLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKH 485
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
G+ R A +F + + C+ TY AL+ AG D+A + + M G P
Sbjct: 486 FGNCGRLSDAVDLFCEM-KKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTP 544
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ + N++L GL K G A E++ K K+S I DA+S + +
Sbjct: 545 DIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTI 587
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA L + +GF Y +++D G AKR + +F+ ++E A Y
Sbjct: 422 VEKALLLLEEMDE-KGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYA 480
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ N G + AV+++ EMK C P + +Y A M + + EA + + M +
Sbjct: 481 VMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMREN 540
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ ++ +++ L + G + A+E+F+KM+E+ + PD + N ++ +AG
Sbjct: 541 GCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMA 600
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
++R MK + L+ DE+ S
Sbjct: 601 AKLMREMKLKGFEYDSITYSSILEAVGKVDEDCS 634
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 3 DTISNVYKILKYSTWDSAQDL-LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
+ + +V IL+ W + L + ++ +N+VLK A FF+W G
Sbjct: 3 EVVDHVCNILRQLNWRPDTLVALSRVNRTLSAFHINEVLKHQKESGLALKFFDWAKEQEG 62
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ HD TYTTM+ I G A+ + + + M+ +G VTY ++H A + A+
Sbjct: 63 YKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAM 122
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
I+ +M+ + C P V+Y + + A D+Y++M Q G P+ +TY+V++ L
Sbjct: 123 RIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCL 182
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+AGK EAL++F +M E G P NI+I+ K+G
Sbjct: 183 GKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSG 221
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 88/162 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G + DR TY T++D+ +A + +++ MQ+ G D TY+ ++H L AG V
Sbjct: 129 QEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKV 188
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ ++EEM + P++V+Y + + + A +Y +M G P+ TY+++
Sbjct: 189 SEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIM 248
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
ME L + G +EA +F++M++AG PD ++++ KA
Sbjct: 249 MEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKA 290
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 83/153 (54%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D FTY+ ++ G+A ++S +FE M E+G VTY ++ + +G+ A
Sbjct: 167 GFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMA 226
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +M+ +P V+Y+ M++L ++EA ++ EM Q G P+ Y V+++
Sbjct: 227 MKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDM 286
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+A E ALE + KM ++G+ P+ N L+
Sbjct: 287 WGKARNAERALEWYQKMLDSGLTPNVQISNSLL 319
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 338 HRRRDG-ALLAFEYSVKMD-LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
H++ G AL F+++ + + + Y +IGI+ + F + +++EM + G V
Sbjct: 43 HQKESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCV 102
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYK 452
LIH G A A +IF + E+ C+ TY L+ ++ AG D A+ +Y+
Sbjct: 103 VTYNRLIHAYGRANFLGEAMRIFYQMQEE-GCSPDRVTYCTLVDLHSKAGFHDNAMDMYQ 161
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M + G P T++V++ L K G+VS+A
Sbjct: 162 KMQQAGFQPDTFTYSVIIHCLGKAGKVSEA 191
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R Y L+ + K ++ ++M +AG + +++IH LG A + A K+F
Sbjct: 136 DRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLF 195
Query: 419 SLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ E TY +I + +G+ A+K+Y M G HP T+++++ L ++
Sbjct: 196 EEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQI 255
Query: 477 GRVSDAEIYRKE 488
G + +AE+ E
Sbjct: 256 GHLQEAELMFNE 267
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 189/496 (38%), Gaps = 59/496 (11%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
P S V + LK+ P + ++ +F V+ + H T ML+ ++ M Y
Sbjct: 80 PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139
Query: 88 VFELMQEKGINIDAVTYTSVMHWLS----------------------NAGDVDG------ 119
VF+LMQ++ I D TY ++ LS NA +G
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 120 -------AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
A+ ++ M L+ P++ +Y++ M L + + KEM GL PN Y
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T+T+ + L RAGK EA EI +M + G PD +LI+ C A + + M
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
K R + L F + DS+ QF E D + VT I
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSV-----KQFWSEMEKDGHVPDVVTFTI------ 368
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
LV L K N L + D+ I + +T+I R D AL F
Sbjct: 369 ---LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ + Y+ I K E E+M G + + ++ L A R
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 413 PAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A +IF L+P+ + TY ++ Y G D+A+K+ M G P +
Sbjct: 486 EAKQIFYGLKDIGLVPD----SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 467 NVLLAGLEKLGRVSDA 482
N L+ L K RV +A
Sbjct: 542 NSLINTLYKADRVDEA 557
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 187/475 (39%), Gaps = 28/475 (5%)
Query: 18 DSAQDLLK---NLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
DS LLK L +K + YT +VL + +A+ + G D TYT
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD-DEGCGPDVVTYTV 298
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++D A+++ K VFE M+ D VTY +++ S+ D+D W EM+
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P +V++T + L EA D M +G+ PN +TY L+ L+R + ++AL
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
E+F M+ GV+P + I+ K+G++ + + MK +A +L +
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
A + + + D+ + ID+ +
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI--------------K 524
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
LLS +M+ + D V++++I R D A F +M L Y L+ L
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK-IFSLLPEDQKCTA- 429
K + E+ E M + G L L A K +F ++ D C
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM--DMGCVPD 642
Query: 430 --TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY +I G +A+ + M +K ++P T LL G+ K + DA
Sbjct: 643 VFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDA 696
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S G D TY +LD +G++ +I + +++ M + +T+ V+ L AG+V
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 118 DGAVNIWEE-MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
D A++++ + M ++ PT +Y + L + R+ EA +++ M+ G PNC Y +
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ +AG+ + A +F +M + GV+PD ++L++ C G + + +KE+
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 237 L 237
L
Sbjct: 992 L 992
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +++ FG+A + +F+ M ++G+ D TY+ ++ L G VD ++ ++E+K
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM-IQRGLPPNCYTYTVLMEYLVRAGKY 187
P +V Y + L + R++EA ++ EM RG+ P+ YTY L+ L AG
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 188 EEALEIFSKMQEAGVQPDKAACNILI 213
EEA +I++++Q AG++P+ N LI
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
L+++ +S R F+ TY ++D ++ R+ K +FE M + G + Y +++
Sbjct: 877 LYYDLMS-DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
AG+ D A +++ M + P + +Y+ + L + RV E +KE+ + GL P+
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILI 213
Y +++ L ++ + EEAL +F++M+ + G+ PD N LI
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 152/380 (40%), Gaps = 52/380 (13%)
Query: 107 VMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + +V GA ++E+ K P + +Y + L D ++ A DV+ ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ TY L++ ++GK +E E++ +M + + NI+I KAG
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV--- 871
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
++ L L Y + + FSP T
Sbjct: 872 --------DDALDLYYDLMSDR-------------------DFSP------------TAC 892
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
GPL ID L K L L G++D + + A+ + +I D A
Sbjct: 893 TYGPL-IDG-----LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ VK + + Y L+ L + + +E+ ++G + V L+I+ L
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 406 GSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
G + R A +F+ + + T TY +LI AG ++A KIY + R G+ P+
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
+ TFN L+ G G+ A
Sbjct: 1067 VFTFNALIRGYSLSGKPEHA 1086
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 1/191 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H + A F ++ G TY ++ EA I + VF ++ G D
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY ++ +G +D +++EM EC +++ + L V +A D+Y ++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 163 IQ-RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ R P TY L++ L ++G+ EA ++F M + G +P+ A NILI KAGE
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 222 TRTIILILRYM 232
+ + M
Sbjct: 942 ADAACALFKRM 952
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D R+ + F+ ++E G+N D V Y +++ L + ++ A
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 121 VNIWEEMKL-KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EMK + P + +Y + + L + V+EA +Y E+ + GL PN +T+ L+
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+GK E A ++ M G P+
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 150/393 (38%), Gaps = 54/393 (13%)
Query: 82 ISSMKYVFE-LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+S + +FE ++ G+ TY ++ L A ++ A +++ ++K C P + +Y
Sbjct: 765 VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK-MQE 199
+ + ++ E ++YKEM N T+ +++ LV+AG ++AL+++ M +
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
P LI+ K+G + M + ++ + F A E D
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD- 943
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
A +L ++ +
Sbjct: 944 ------------------------------------------------AACALFKRMVKE 955
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
++ D S +++ C R D L F+ + LN + Y +I L K + +
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 380 AEIVEEM-TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIG 436
+ EM T G + +Y LI LG A A KI++ + + T+ ALI
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
Y +G + A +Y+TM G P+ GT+ L
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEKGINIDAVTYTSVMHWLSNAGD 116
+ G N D Y +++ G++ R+ +F E+ +GI D TY S++ L AG
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
V+ A I+ E++ P + ++ A ++ L+ + + A VY+ M+ G PN TY
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 177 L 177
L
Sbjct: 1108 L 1108
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRK 457
LI L + R A ++F + D C A Y LI + AG AD A ++K M ++
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGML-DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
G+ P L T++VL+ L +GRV + Y KE ++ L+ D V
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE---LKESGLNPDVV 997
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N + K+H +E+A + FN + SRG D +TY +++ G A + ++ +Q
Sbjct: 1003 INGLGKSHR-LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
G+ + T+ +++ S +G + A +++ M P +Y
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 173/402 (43%), Gaps = 36/402 (8%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D V+Y +++ L GDVD A + EM + P V+Y + + L + A +V
Sbjct: 10 DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
M+ PNC+TY +M +G+ E+A+ IF KM G++PD N L++ CK
Sbjct: 70 TVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G+ I M + L + L + + L ++H
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYA----SKGALVEMH-------------- 167
Query: 280 EFVTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ + ++ + +D + IL+ K++ + + + S + + + ++ T+I+
Sbjct: 168 DLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGL 227
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R D A+L FE + L Y +LI L + + K E++ E+ G + +
Sbjct: 228 CKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNI 287
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKALK 449
++ L R + + K+F LL P+ TY+ LI Y AG D A+K
Sbjct: 288 VFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPD----VITYSTLIDGYCLAGKMDGAMK 343
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ M G+ P T++ L+ G K+ R+ DA KE +S
Sbjct: 344 LLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMES 385
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 171/401 (42%), Gaps = 30/401 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA++ ++ + R + D TY +++ +A+ + V +M + + TY
Sbjct: 27 VDKAYITYHEMLDRR-VSPDAVTYNSIIAALSKAQAMDRAMEVLTVM----VMPNCFTYN 81
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+MH ++G + A+ I+ +M P +V+Y + M L N + EA ++ M++R
Sbjct: 82 SIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKR 141
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ TY L+ G E ++ + M + G+Q D NILI K + +
Sbjct: 142 GLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEV 201
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLL---WQVHPQFSPEFISDNDAV 279
+L+ M++ L A+ Y + L K+ +D++L + +P + +
Sbjct: 202 VLVFSKMRQQGLTPNAVNYRTVIDGL--CKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLI 259
Query: 280 EFVTTDIEGPLS-------IDQG----------LVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ T + + +DQG ++ L K+ ++ L + +
Sbjct: 260 HALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVN 319
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D ST+I+ C + DGA+ V + L + Y LI K+N +
Sbjct: 320 PDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALAL 379
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+EM G + + +++H L RR A ++++ + E
Sbjct: 380 FKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITE 420
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 38 QVLKTHPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG 96
L T+ EKA L F + + G N + + T+LD + R+ K +F+L+ G
Sbjct: 260 HALCTYDKWEKAEELIFEILDQ--GINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIG 317
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
+N D +TY++++ AG +DGA+ + M P V+Y+ + +R+++A
Sbjct: 318 VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDAL 377
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
++KEM G+ P+ TY +++ L R + A E+++++ E+G Q + + N
Sbjct: 378 ALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYN------ 431
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFK 245
I+++ + K N L + + F+
Sbjct: 432 ---------IILMDFAKTNSLMMHFGCFR 451
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 199/501 (39%), Gaps = 63/501 (12%)
Query: 25 KNLPIKWDSY-TVNQVLKTHPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI 82
++ P SY TV T ++KA+ LF + R G + TYTT++D +A+ +
Sbjct: 197 RSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDR--GIQPNVVTYTTVIDGLCKAQVV 254
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+ VF+ M +KG+ D TY ++H + G V + EEM P +Y +
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY--------------- 187
+ L N R +EA + MI++G+ PN Y +L+ G
Sbjct: 315 LNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL 374
Query: 188 --------------------EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
+EA+ IF+KM++ G+ PD LI+ CK G +L
Sbjct: 375 SPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVL 434
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN---DAVEFVTT 284
M +A VF + D+ W+ +F E ++ D V F T
Sbjct: 435 KFNQMMNEGVAPNIFVFNSLVYGLCTVDK-----WEKAKEFYFEMLNQGIRPDVVFFNT- 488
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK-SIQLDSAVISTIIEVNCDHRRRDG 343
+L L K V L +M++ + D +T+I +C R D
Sbjct: 489 ------------ILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDE 536
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A + + + + L + Y L+ + + EM + G + GV + ++H
Sbjct: 537 AAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILH 596
Query: 404 RLGSARRPVPAAKIF--SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L + RR A +++ + Q Y ++ D+A K+++++C K
Sbjct: 597 GLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQL 656
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
+ TFN+++ L K GR DA
Sbjct: 657 EITTFNIMIGALFKSGRNEDA 677
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 167/428 (39%), Gaps = 51/428 (11%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
S+ R + +Y T+++ F ++ +F M ++GI + VTYT+V+ L A
Sbjct: 194 SQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
VD A ++++M K P +Y + + KE + +EM GL P+CYTY
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ YL G+ EA F M G++P+ A ILI G + +L M EN
Sbjct: 314 LLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
L+ + +F + T ID+ +
Sbjct: 374 LSPDHHIFN-----------------------------------IIFTAYAKKAMIDEAM 398
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ + + + + D +I+ C R D A+L F + +
Sbjct: 399 --------------HIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV 444
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ +L+ L ++ + K E EM G V ++ L + + + A +
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 417 IFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ L+ + +YT LIG + G D+A K M G+ P T+N LL G
Sbjct: 505 LIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Query: 475 KLGRVSDA 482
+ GR+ DA
Sbjct: 565 RAGRIDDA 572
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 4/203 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++ ++ +K D +T N +L + ++ A+ F + R+ G TY+T+L
Sbjct: 542 DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN-GITPGVVTYSTILHGLFT 600
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+R S K ++ M G + Y +++ LS VD A +++ + K+ I +
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ + LF + R ++A ++ + GL P+ +TY ++ E L+ G EE ++FS M+
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720
Query: 199 EAGVQPDKAACNILIEKCCKAGE 221
++G P+ N L+ + G+
Sbjct: 721 KSGTTPNSRMLNALVRRLLHRGD 743
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 143/363 (39%), Gaps = 28/363 (7%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ P+ TY++L+ R G+ E F + ++G + + N L++ C A R +
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 227 -LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
++++ M E + L+ F + L +H + S V T
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 286 IEGPLS---IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
I G + +D+ L L +MD+ IQ + +T+I+ C + D
Sbjct: 210 INGFFTEGQVDKAYNLFL--------------EMMDRGIQPNVVTYTTVIDGLCKAQVVD 255
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A F+ + + + Y LI + + + +V ++EEM+ G Y L+
Sbjct: 256 RAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLL 315
Query: 403 HRLGSARRPVPAAKIF-SLLPEDQK-CTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
+ L + R A F S++ + K A Y LI Y + G+ + + M G+
Sbjct: 316 NYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLS 375
Query: 461 PSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV---PMEEKICDLLYGGD 516
P FN++ K + +A I+ K K+ LS D V + + +C L D
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ----GLSPDVVNFGALIDALCKLGRVDD 431
Query: 517 GVL 519
VL
Sbjct: 432 AVL 434
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 128/340 (37%), Gaps = 59/340 (17%)
Query: 151 RVKEATDVY-KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM---QEAGVQPDK 206
R++EA D+ K M + G P+ +Y L++ + EEALE+ M Q P+
Sbjct: 144 RLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNV 203
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ 263
+ +I G+ + M + + + Y + L +V D + + Q
Sbjct: 204 VSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQ 263
Query: 264 -VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ P DND + I G LSI K K +V +L + ++
Sbjct: 264 MIDKGVKP----DNDTYNCL---IHGYLSIG--------KWKEVV---RMLEEMSAHGLK 305
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D +++ C++ R A F+ ++ + Y LI ++ ++
Sbjct: 306 PDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDL 365
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAG 442
+ M + G S P IF+++ +TA Y
Sbjct: 366 LNLMVENGLS--------------------PDHHIFNII---------FTA----YAKKA 392
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D+A+ I+ M ++G+ P + F L+ L KLGRV DA
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDA 432
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 183/429 (42%), Gaps = 26/429 (6%)
Query: 61 GFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G T+ T+L+ + +AK I ++K +F+ + + G +TYT+++ L G
Sbjct: 136 GLQPTHVTFGTLLNGLCSKAKIIDAVK-LFDEIGKMGFAPSLITYTTIIKGLCKIGHTTN 194
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + ++M+ K C P +V+Y + L + R EA + EM+ +G+PPN TY+ ++
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
G+ EA +F +M V P+ IL++ CK G + M EN +
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP 314
Query: 238 -ALRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
A Y + DE L V F+P +V I G
Sbjct: 315 DAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAP-------SVRVYNILINGH------ 361
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K + L +LLS + D+ + D+ ST+++ C R A F+
Sbjct: 362 -----CKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG 416
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L + Y L+ L K + +++ M ++ + + +LI + + + A
Sbjct: 417 LLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAR 476
Query: 416 KIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++FS + Q TYT +I G +++A ++++ M G P+ T+NV + G
Sbjct: 477 ELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF 536
Query: 474 EKLGRVSDA 482
+ G S+A
Sbjct: 537 LRNGDPSNA 545
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 159/411 (38%), Gaps = 47/411 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y T++D + +R + Y F M ++GI + VTY+S++H N G ++
Sbjct: 205 KGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNE 264
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++++M + P V++T + L + EA V++ M + G+ P+ YTY+ LM+
Sbjct: 265 ATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMD 324
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ +EA ++F M G P NILI CK+ +L M + L
Sbjct: 325 GYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTP 384
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ +Q F A PQ + + + + + I + +D
Sbjct: 385 DTVTYSTLMQGFCQAGR---------PQVAQKLFKEMCSYGLLPDSITYSILLDG----- 430
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K +L LL + + I+ + + +I+ C+ + + A F +
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y +I L+K + E+ +M G
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNG----------------------------- 521
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
LP + TY I + G A+++ + M +G TF +LL
Sbjct: 522 CLPN----SCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 168/426 (39%), Gaps = 32/426 (7%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL--SNAGDVDGAVNIWEE 126
+ +L + K S++ + + M I + T T +++ L SN V A + +
Sbjct: 72 FNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGK 131
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M PT V++ + L ++ +A ++ E+ + G P+ TYT +++ L + G
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGH 191
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
AL++ KM+E G +PD A N +I+ CK + M + + +
Sbjct: 192 TTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSS 251
Query: 247 ALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
L F +E SL Q+ I N VT I LV L K+
Sbjct: 252 ILHGFCNLGQLNEATSLFKQM--------IGRNVMPNTVTFTI---------LVDGLCKE 294
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
++ + + + ++ D+ S +++ C + D A F+ V Y
Sbjct: 295 GMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVY 354
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF----- 418
LI K + ++ EM + + L+ A RP A K+F
Sbjct: 355 NILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS 414
Query: 419 -SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
LLP+ + TY+ L+ G D+A ++ K M I P + +N+L+ G+ G
Sbjct: 415 YGLLPD----SITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFG 470
Query: 478 RVSDAE 483
++ A
Sbjct: 471 KLEAAR 476
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 104/226 (46%), Gaps = 4/226 (1%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
++ D+YT + ++ + M++A F+ + +GF Y +++ +++R++
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFD-IMVGKGFAPSVRVYNILINGHCKSRRLNEA 370
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
K + M ++ + D VTY+++M AG A +++EM P ++Y+ +
Sbjct: 371 KTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG 430
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + + EA + K M + + P+ Y +L++ + GK E A E+FS + G+QP
Sbjct: 431 LCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPS 490
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
++I K G + + R M N + A+Q F
Sbjct: 491 VVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF 536
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY+ +LD + + + + MQE I Y ++ + N G ++
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ + +K P++V+YT + L EA +++++M+ G PN TY V +
Sbjct: 474 AARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAI 533
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ +R G A+ + +M G D + +L++
Sbjct: 534 QGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 150/411 (36%), Gaps = 60/411 (14%)
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
I+ ++T +N V AV + ++ P +V + + L
Sbjct: 30 ISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVI 89
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGK--YEEALEIFSKMQEAGVQPDKAACNILIE 214
+ K+M + PN YT T+L+ L + + A KM + G+QP L+
Sbjct: 90 SLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLN 149
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
C + + K+ DE + F+P I+
Sbjct: 150 GLCSKAKI-------------------------IDAVKLFDEIGKM------GFAPSLIT 178
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
TT I+G I + L KK + +K + D +T+I+
Sbjct: 179 -------YTTIIKGLCKIGHTTNALQLLKK-----------MEEKGCKPDVVAYNTVIDS 220
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C RR + A+ F V + Y +++ L + + ++M
Sbjct: 221 LCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPN 280
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYK 452
+L+ L + A ++F ++ E+ + TY+AL+ Y D+A K++
Sbjct: 281 TVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFD 340
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
M KG PS+ +N+L+ G K R+++A K++ ++ +D P
Sbjct: 341 IMVGKGFAPSVRVYNILINGHCKSRRLNEA-------KTLLSEMYDRDLTP 384
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 189/491 (38%), Gaps = 59/491 (12%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S V +VL + P + ++ +F V+ + H T ML+ +I M YVF+LM
Sbjct: 87 SSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLM 146
Query: 93 QEKGINIDAVTYTSVMHWLS----------------------NAGDVDG----------- 119
Q++ I D TY ++ LS NA +G
Sbjct: 147 QKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFC 206
Query: 120 --AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ ++ M L P++ +Y++ M L ++ + KEM GL PN YT+T+
Sbjct: 207 TEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTIC 266
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L RAGK EA EI +M + G PD +LI+ C A + + MK R
Sbjct: 267 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRH 326
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ L F + DS+ QF E D + VT I LV
Sbjct: 327 KPDRVTYITLLDRFSDNRDLDSV-----NQFWSEMEKDGHVPDVVTFTI---------LV 372
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L K N + L + D+ I + +T+I R D AL F+ + +
Sbjct: 373 DALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVK 432
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y+ I K E E+M G + + ++ L A R A +I
Sbjct: 433 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 492
Query: 418 F------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
F L+P+ + TY ++ Y G D+A+K+ M P + N L+
Sbjct: 493 FYGLKDIGLVPD----SVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLIN 548
Query: 472 GLEKLGRVSDA 482
L K RV +A
Sbjct: 549 TLYKADRVDEA 559
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 202/523 (38%), Gaps = 97/523 (18%)
Query: 22 DLLKNLPIKWDSYTVNQV----LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
D++++ I + +T N + L+ H + +F N S G +TY +D +G
Sbjct: 389 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNM--ESLGVKPTAYTYIVFIDYYG 446
Query: 78 EAKRISSMKYVFELMQEKGI--NI---------------------------------DAV 102
++ S FE M+ KGI NI D+V
Sbjct: 447 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 506
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +M S G++D A+ + EM C P ++ + + L+ DRV EA ++ M
Sbjct: 507 TYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 566
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE- 221
+ L P TY L+ L + GK +EA+E+F M + G P+ N L + CK E
Sbjct: 567 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 626
Query: 222 TRTIILILRYMKENRL--ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS----- 274
T + ++ + M + Y L E Q+ P+F++
Sbjct: 627 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 686
Query: 275 --------DNDA----VEFVTTDIEGPLSID-QGLVLILLKKKNLVAIDSLLSGIMDKSI 321
DA F+ + + P ++ + L+ +L + + S ++ I
Sbjct: 687 PGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGI 746
Query: 322 QLDS-AVISTIIEVNCDHRRRDGALLAFE-YSVKMDLNLERTAYLALIGILIKLNTFPKV 379
D +++ II + H GA + FE ++ + + + Y LIG L++ +
Sbjct: 747 CRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 806
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYF 439
++ ++ G +P+ ATY L+ Y
Sbjct: 807 QDVFLQVKNTG-----------------------------CIPD----VATYNFLLDAYG 833
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+G D+ +IYK M P+ T N++++GL K G V DA
Sbjct: 834 KSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDA 876
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 167/426 (39%), Gaps = 21/426 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TYT ++D A+++ K VF M+ D VTY +++ S+ D+D
Sbjct: 290 GCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 349
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
W EM+ P +V++T + L EA M +G+ PN +TY L+
Sbjct: 350 NQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICG 409
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L+R + ++ALEIF M+ GV+P + I+ K+G++ + + MK +A
Sbjct: 410 LLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 469
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+L + A + + + D+ + ID+ +
Sbjct: 470 IVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI---- 525
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
LLS +++ + D V++++I R D A F +M L
Sbjct: 526 ----------KLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 575
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK-IFS 419
Y L+ L K + E+ E M + G L L A K +F
Sbjct: 576 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 635
Query: 420 LLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
++ D C TY +I G +A+ + M +K ++P T LL G+ K
Sbjct: 636 MM--DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKA 692
Query: 477 GRVSDA 482
G + DA
Sbjct: 693 GLIEDA 698
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D TY +LD +G++ +I + +++ M + +T+ V+ L AG+V
Sbjct: 814 KNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNV 873
Query: 118 DGAVNIWEE-MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
D A++++ + M ++ PT +Y + L + R+ EA +++ M G PNC Y +
Sbjct: 874 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNI 933
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ +AG+ + A +F +M + GV+PD ++L++ C G + R +KE+
Sbjct: 934 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG 993
Query: 237 L 237
L
Sbjct: 994 L 994
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H A + F ++ G TY ++ EA I + VF ++ G D
Sbjct: 764 HNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVA 823
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY ++ +G +D I++EM EC P +++ + L V +A D+Y ++
Sbjct: 824 TYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883
Query: 163 IQ-RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ R P TY L++ L ++G+ EA ++F M + G +P+ A NILI KAGE
Sbjct: 884 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE 943
Query: 222 TRTIILILRYM 232
+ + M
Sbjct: 944 ADAACALFKRM 954
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +++ FG+A + +F+ M ++G+ D TY+ ++ L G VD ++ + E+K
Sbjct: 931 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELK 990
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-RGLPPNCYTYTVLMEYLVRAGKY 187
P +V Y + L R++EA ++ EM + RG+ P+ YTY L+ L AG
Sbjct: 991 ESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMV 1050
Query: 188 EEALEIFSKMQEAGVQPDKAACNILI 213
EEA +I++++Q AG++P+ N LI
Sbjct: 1051 EEAGKIYNEIQRAGLEPNVFTFNALI 1076
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 139/352 (39%), Gaps = 51/352 (14%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P + +Y + L D ++ A DV+ ++ G P+ TY L++ ++GK +E EI
Sbjct: 785 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEI 844
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
+ +M +P+ NI+I KAG ++ L L Y + +
Sbjct: 845 YKEMSAHECEPNTITHNIVISGLVKAGNV-----------DDALDLYYDLMSDR------ 887
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
FSP T GPL ID L K L L
Sbjct: 888 -------------DFSP------------TACTYGPL-IDG-----LSKSGRLYEAKQLF 916
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
G+ D + + A+ + +I D A F+ VK + + Y L+ L +
Sbjct: 917 EGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 976
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---T 430
+ E+ ++G + V L+I+ LG R A +F+ + + + T T
Sbjct: 977 GRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYT 1036
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y +LI AG ++A KIY + R G+ P++ TFN L+ G G+ A
Sbjct: 1037 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1088
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
L+++ +S R F+ TY ++D ++ R+ K +FE M + G + Y +++
Sbjct: 879 LYYDLMS-DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILING 937
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
AG+ D A +++ M + P + +Y+ + L + RV E ++E+ + GL P+
Sbjct: 938 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPD 997
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILI 213
Y +++ L + + EEAL +F++M+++ G+ PD N LI
Sbjct: 998 VVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLI 1041
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%)
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
++LM ++ + A TY ++ LS +G + A ++E M C P Y +
Sbjct: 881 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGK 940
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
A ++K M++ G+ P+ TY+VL++ L G+ +E L F +++E+G+ PD
Sbjct: 941 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVC 1000
Query: 209 CNILIEKCCKAGETRTIILILRYMKENR 236
N++I K +++ MK++R
Sbjct: 1001 YNLIINGLGKFHRLEEALVLFNEMKKSR 1028
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D R+ + F ++E G+N D V Y +++ L ++ A
Sbjct: 958 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEA 1017
Query: 121 VNIWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EMK + P + +Y + + L + V+EA +Y E+ + GL PN +T+ L+
Sbjct: 1018 LVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1077
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+GK E A ++ M G P+
Sbjct: 1078 GYSLSGKPEHAYAVYQTMVTGGFSPNTG 1105
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 150/392 (38%), Gaps = 54/392 (13%)
Query: 83 SSMKYVFE-LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
S + +FE ++ G+ TY ++ L A ++ A +++ ++K C P + +Y
Sbjct: 768 SGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNF 827
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK-MQEA 200
+ + ++ E ++YKEM PN T+ +++ LV+AG ++AL+++ M +
Sbjct: 828 LLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDR 887
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
P LI+ K+G + M + ++ + F A E D
Sbjct: 888 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEAD-- 945
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
A +L ++ +
Sbjct: 946 -----------------------------------------------AACALFKRMVKEG 958
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
++ D S +++ C R D L F + LN + Y +I L K + +
Sbjct: 959 VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEAL 1018
Query: 381 EIVEEMTKA-GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGV 437
+ EM K+ G + +Y LI LG A A KI++ + + T+ ALI
Sbjct: 1019 VLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1078
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
Y +G + A +Y+TM G P+ GT+ L
Sbjct: 1079 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEKGINIDAVTYTSVMHWLSNAGD 116
+ G N D Y +++ G+ R+ +F E+ + +GI D TY S++ L AG
Sbjct: 990 KESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGM 1049
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
V+ A I+ E++ P + ++ A ++ L+ + + A VY+ M+ G PN TY
Sbjct: 1050 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1109
Query: 177 L 177
L
Sbjct: 1110 L 1110
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRK 457
LI L + R A ++F + D C A Y LI + AG AD A ++K M ++
Sbjct: 899 LIDGLSKSGRLYEAKQLFEGM-SDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 957
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
G+ P L T++VL+ L +GRV + Y +E ++ L+ D V
Sbjct: 958 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFRE---LKESGLNPDVV 999
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N + K H +E+A + FN + +SRG D +TY +++ G A + ++ +Q
Sbjct: 1005 INGLGKFHR-LEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1063
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
G+ + T+ +++ S +G + A +++ M P +Y
Sbjct: 1064 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1107
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 180/447 (40%), Gaps = 17/447 (3%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
+ L+ H +E F ++ + + D TY T+ + M V M++ G
Sbjct: 130 EFLRVHDKVEDMAAVFEFMQK-KIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGF 188
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
++A +Y ++H L +G A+ ++ M + P++ +Y+A M L +
Sbjct: 189 VLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMV 248
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ KEM GL PN YT+T+ + L RAGK +EA EIF +M + G PD +LI+ C
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC 308
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
AG+ + MK N ++ L F ND +F + +D
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKF-----NDFGDLDTFKEFWSQMEADGY 363
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
+ VT I LV +L K ++ + + + I + +T+I
Sbjct: 364 MPDVVTFTI---------LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
R + AL + + + Y+ I K K E E+M G +
Sbjct: 415 AGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMC 455
++ L R A +F+ L E+ + TY ++ Y G D+A+ + M
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA 482
R G P + N L+ L K GRV +A
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 213/483 (44%), Gaps = 29/483 (6%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
++A+ F+ V R +G + TY T++ A RI + + M+ G+ A TY +
Sbjct: 384 DEAFATFD-VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYIT 442
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+ + +G+ AV +E+MK K P IV+ A + L R++EA ++ + + G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L P+ TY ++M+ + G+ +EA+ + S+M G +PD N LI+ KAG
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 227 LILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ MK+ +L+ + L +V + + + SP IS N ++
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Query: 283 TTDIEGPLSIDQGLVLILLK-KKNLVAIDSLLSGI---------------MDKSIQLDSA 326
+ E L++ + ++ K +++ ++++ G+ + KS+ D
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHV 682
Query: 327 VISTIIE--VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
I T++ V C + D +A ++ ++ + R+ + L+G + K E
Sbjct: 683 TICTLLPGLVKCG-QIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAE 741
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED---QKCTATYTALIGVYFSA 441
E+ G L+ L +R + A +IF + A+Y LIG
Sbjct: 742 ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKE-KKSIQADALSK 499
+KA ++K M G P TFN+LLA K G++++ E+Y++ + + DA++
Sbjct: 802 HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITY 861
Query: 500 DAV 502
+ V
Sbjct: 862 NIV 864
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 191/437 (43%), Gaps = 36/437 (8%)
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
E R+ K +F ++E G+ D+VTY +M S G VD AVN+ EM C P
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
++ + + L+ RV EA ++ M L P TY L+ L + G+ ++A+E+F
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
M P+ + N L++ CK E + + + K + + V + +
Sbjct: 602 SMIXKKCSPNTISFNTLLDCFCKNDEVELALKM--FSKMTVMDCKPDVLTYNTVIYGLIK 659
Query: 256 EN--DSLLW---QVHPQFSPEFISDNDAVEFVTT--DIEGPLSIDQGLVLILLKKKNLVA 308
EN + W Q+ P+ ++ + + I +SI + + + + N
Sbjct: 660 ENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719
Query: 309 IDSLLSGI-----MDKSI------------QLDSAVISTIIEVNCDHRRRDGALLAFE-Y 350
+ L+ G MDK+I + DS +I ++ V C H+R A F+ +
Sbjct: 720 WEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP-LVRVLCKHKRELYAYQIFDKF 778
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ K+ ++ +Y LIG L++++ K ++ ++M G + + +L+ G + +
Sbjct: 779 TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGK 838
Query: 411 PVPAAKIFSLLPE--DQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
++F L E ++C TY +I + + DKAL + + P+ T
Sbjct: 839 ---ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT 895
Query: 466 FNVLLAGLEKLGRVSDA 482
+ L+ GL K+GR+ +A
Sbjct: 896 YGPLIDGLAKVGRLEEA 912
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 194/466 (41%), Gaps = 25/466 (5%)
Query: 24 LKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+++L ++ + YT +VL +++A+ F + G D TYT ++D A
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD-DEGCGPDLVTYTVLIDALCNAG 311
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
++ + K +F M+ G D V Y +++ ++ GD+D W +M+ P +V++T
Sbjct: 312 QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ +L EA + M ++G+ PN +TY L+ L+RAG+ E+AL++ M+
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
GVQP I+ K+GET + MK + +L +
Sbjct: 432 GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR---- 487
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMD 318
L + F+ + +N P S+ +++ K V A++ LLS ++
Sbjct: 488 LREAKTMFNG--LRENGL---------APDSVTYNMMMKCYSKVGQVDEAVN-LLSEMIR 535
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ D V++++I+ R D A F+ M L+ Y L+ L K K
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQK 595
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP--EDQKCTATYTALIG 436
E+ E M S L+ A K+FS + + + TY +I
Sbjct: 596 AIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ A + + +K +HP T LL GL K G++ DA
Sbjct: 656 GLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDA 700
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 180/429 (41%), Gaps = 31/429 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D+ Y T+LD F + + + K + M+ G D VT+T ++ L A D
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++ M+ + P + +Y + L R+++A + M G+ P YTY
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITF 443
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++Y ++G+ +A+E F KM+ G+ P+ ACN + + G R + ++EN L
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
A + Y + + DE +LL + + P+ I N ++ + +D
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID----SLYKAGRVD 559
Query: 294 QGLVLILLKKK-----NLVAIDSLLSGI-----MDKSIQLDSAVI-----------STII 332
+ + K +V ++LLSG+ + K+I+L ++I +T++
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLL 619
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C + + AL F MD + Y +I LIK N ++ K+ H
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHP 679
Query: 393 LGVYLGALL--IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
V + LL + + G + A+ F + + + L+G DKA+
Sbjct: 680 DHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIF 739
Query: 451 YKTMCRKGI 459
+ + GI
Sbjct: 740 AEELVLNGI 748
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+ ++L+ H EKAW F + ++ G D FT+ +L + G++ +I+ + +++ M +
Sbjct: 795 IGELLEVHYT-EKAWDLFKDM-KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR 852
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
DA+TY V+ L+ + ++D A++ + ++ + PT +Y + L R++EA
Sbjct: 853 RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+++EM G PNC + +L+ + G E A ++F +M G++PD + IL++
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC 972
Query: 216 CCKAG 220
C AG
Sbjct: 973 LCLAG 977
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/513 (20%), Positives = 196/513 (38%), Gaps = 63/513 (12%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
DS T N ++K + + + N +S G D +++D +A R+ +F
Sbjct: 506 DSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMF 565
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
+ M++ ++ VTY +++ L G V A+ ++E M K+C P +S+ + N
Sbjct: 566 DRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKN 625
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
D V+ A ++ +M P+ TY ++ L++ K A F +++++ + PD
Sbjct: 626 DEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTI 684
Query: 210 NILIEKCCKAGETRTIILILR-YMKENRLALRYP-------------------VFKEALQ 249
L+ K G+ I I R +M + R + +F E L
Sbjct: 685 CTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELV 744
Query: 250 TFKVADENDSLL---------------WQVHPQF------SPEFISDN----DAVEFVTT 284
+ E+ L+ +Q+ +F SP S N + +E T
Sbjct: 745 LNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYT 804
Query: 285 DIEGPLSIDQG-------------LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ L D L+ + K + + L ++ + + D+ + +
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I D AL F V D Y LI L K+ + + EEM+ G
Sbjct: 865 ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
+ +LI+ G A ++F + + + +YT L+ AG D+AL
Sbjct: 925 KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + G+ P +N ++ GL K R+ +A
Sbjct: 985 YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 20 AQDLLKNLPIKWDSYTVN--QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
A++L+ N + DS+ + +VL H A+ F+ ++ G + +Y ++
Sbjct: 740 AEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELL 799
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E +F+ M+ G DA T+ ++ +G + +++EM + C P +
Sbjct: 800 EVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI 859
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + L ++ + +A D + +++ P TY L++ L + G+ EEA+ +F +M
Sbjct: 860 TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ G +P+ A NILI K G+T T + + M
Sbjct: 920 SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F +S G + + +++ +G+ + +F+ M +GI D +YT
Sbjct: 909 LEEAMRLFEEMS-DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYT 967
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L AG VD A+ + E+K P ++Y + L + R++EA +Y EM R
Sbjct: 968 ILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR 1027
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G+ P+ YTY LM L AG E+A ++ ++Q AG++PD N LI
Sbjct: 1028 GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 17 WDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLD 74
WD +D+ KN+ D++T N +L H K F SR D TY ++
Sbjct: 808 WDLFKDM-KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
++ + F + TY ++ L+ G ++ A+ ++EEM C P
Sbjct: 867 SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926
Query: 135 TIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ Y KI + A ++K M+ G+ P+ +YT+L++ L AG+ +EA
Sbjct: 927 NCAIFNILINGYGKI----GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982
Query: 191 LEIFSKMQEAGVQPDKAACNILI 213
L F++++ G+ PD A N +I
Sbjct: 983 LYYFNELKSTGLDPDFIAYNRII 1005
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 30 KWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
K D+ T N V+ + ++KA FF + S F TY ++D + R+
Sbjct: 855 KPDAITYNIVISSLAKSNNLDKALDFF-YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+FE M + G + + +++ GD + A +++ M + P + SYT + L
Sbjct: 914 RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL 973
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
L RV EA + E+ GL P+ Y ++ L ++ + EEAL ++++M+ G+ PD
Sbjct: 974 CLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDL 1033
Query: 207 AACNILIEKCCKAG 220
N L+ AG
Sbjct: 1034 YTYNSLMLNLGLAG 1047
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A +FN + +S G + D Y +++ G+++R+ ++ M+ +GI D TY
Sbjct: 979 VDEALYYFNEL-KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYN 1037
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+M L AG V+ A ++EE++L P + +Y A ++ L++ + A VYK M+
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097
Query: 166 GLPPNCYTYTVL 177
G PN TY L
Sbjct: 1098 GCNPNIGTYAQL 1109
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D +YT ++D A R+ Y F ++ G++ D + Y +++ L + ++
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++ EM+ + P + +Y + M L L V++A +Y+E+ GL P+ +TY L+
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ E A ++ M G P+
Sbjct: 1076 RGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 168/433 (38%), Gaps = 71/433 (16%)
Query: 46 MEKAWLF-----FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK-GINI 99
M+KA +F N + R F ++ + + KR +F+ +K GI+
Sbjct: 733 MDKAIIFAEELVLNGICREDSF------LIPLVRVLCKHKRELYAYQIFDKFTKKLGISP 786
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+Y ++ L + A +++++MK C P ++ + + + ++ E ++Y
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
KEMI R P+ TY +++ L ++ ++AL+ F + + +P LI+ K
Sbjct: 847 KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G +EA++ F+ + S N A+
Sbjct: 907 GR----------------------LEEAMRLFE--------------EMSDYGCKPNCAI 930
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ + G + D L K+ ++++ I+ D + +++ C
Sbjct: 931 FNILINGYGKIG-DTETACQLFKR------------MVNEGIRPDLKSYTILVDCLCLAG 977
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R D AL F L+ + AY +I L K + + EM G +Y
Sbjct: 978 RVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYN 1037
Query: 400 LLIHRLG------SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
L+ LG A+R ++ L P+ TY ALI Y + + + A +YK
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPD----VFTYNALIRGYSLSENPEHAYTVYKN 1093
Query: 454 MCRKGIHPSLGTF 466
M G +P++GT+
Sbjct: 1094 MMVDGCNPNIGTY 1106
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 90/461 (19%), Positives = 177/461 (38%), Gaps = 39/461 (8%)
Query: 27 LPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
+ K D T N V L + A+ FF+ + +S + D T T+L + +I
Sbjct: 641 MDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIG 698
Query: 84 -SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
++ + M + ++ + +M ++D A+ EE+ L
Sbjct: 699 DAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPL 758
Query: 143 MKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+++L + R A ++ + ++ G+ P +Y L+ L+ E+A ++F M+ G
Sbjct: 759 VRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVG 818
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADEND 258
PD N+L+ K+G+ + + + M R A+ Y + +L D+
Sbjct: 819 CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKAL 878
Query: 259 SLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
+ V F P T GPL ID L K L L +
Sbjct: 879 DFFYDLVSSDFRP------------TPRTYGPL-IDG-----LAKVGRLEEAMRLFEEMS 920
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
D + + A+ + +I + A F+ V + + +Y L+ L
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCTATY 431
+ E+ G +I+ LG ++R A +++ ++P+ TY
Sbjct: 981 EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD----LYTY 1036
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+L+ AG ++A ++Y+ + G+ P + T+N L+ G
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +I L K N K + ++ + LI L R A ++F +
Sbjct: 860 TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919
Query: 422 PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
D C A + LI Y G + A +++K M +GI P L ++ +L+ L GR
Sbjct: 920 -SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 479 VSDAEIYRKEKKSIQAD 495
V +A Y E KS D
Sbjct: 979 VDEALYYFNELKSTGLD 995
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 38/192 (19%)
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
H + + FE+ K + + YL + L ++ ++ +M KAG L Y
Sbjct: 135 HDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYS 194
Query: 398 GALLIHRL------GSA----RRPV-----PAAKIFSLLP-------------------E 423
LIH L G A RR V P+ K +S L E
Sbjct: 195 YNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEME 254
Query: 424 D---QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
D + T+T I V AG D+A +I++ M +G P L T+ VL+ L G++
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLE 314
Query: 481 DA-EIYRKEKKS 491
+A E++ K K +
Sbjct: 315 NAKELFVKMKAN 326
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 186/462 (40%), Gaps = 50/462 (10%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D T N VL ++ N R+ RG + TY+T++D + ++ +
Sbjct: 507 DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 566
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
M E G + VTY++V+ L G ++ AV + +M+ C P V+Y + F
Sbjct: 567 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 626
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
R++EA + +EM++ G P+ TYT L L R+G+++EA+EI M G P+
Sbjct: 627 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 686
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
+ +++ CKAG + M + + + + AL D L
Sbjct: 687 SSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI--------DGLCKAGRI--- 735
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
++A EF+ I + ++V L++G+ D+ I
Sbjct: 736 ------DEAYEFLERMIRAG------------RIPDVVTFSILINGL------CDAGRID 771
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
T +E+ C R K D+ AY A+I F ++EEM
Sbjct: 772 TGLELFCGMAER---------GCKADI----YAYNAMINAYCLKGEFSAAYALLEEMKTH 818
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALK 449
G + ++I L R A F +PED + +Y LI ++ +++AL+
Sbjct: 819 GIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALE 878
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ + M G P + ++ GL K G A +E +S
Sbjct: 879 LLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRS 920
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 194/447 (43%), Gaps = 26/447 (5%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S V+ +LK ME A + + R G D TY T++D F + +R+ + M
Sbjct: 582 STVVDGLLKVGR-MEDAVVVLRQM-RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
E G + VTYT++ H L +G D AV I + M + C P ++Y++ + L RV
Sbjct: 640 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 699
Query: 153 KEATDVYKEMIQ-RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
EA +++M + + P+ Y+ L++ L +AG+ +EA E +M AG PD +I
Sbjct: 700 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSI 759
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
LI C AG T + + M E + + + + E S + + +
Sbjct: 760 LINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEF-SAAYALLEEMKTH 818
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL-DSAVIST 330
I+ N ++ G+V+ L + ID +S D +T
Sbjct: 819 GIAKN--------------TVTHGIVIKALCGND--RIDEAVSYFHSIPEDCRDEISYNT 862
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I RR + AL V + + Y+ ++ L K + A++++EM G
Sbjct: 863 LITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRG 922
Query: 391 HSLGVYLGALLIHRLGSARR-PVPAAKIFSLLPEDQKCTA-TYTALIGVYFSAGSADKAL 448
HS + ++I L A++ P+ +L ++ K A Y++LI + A D A
Sbjct: 923 HSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAW 982
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEK 475
K+ ++ GI P++ ++ ++ L K
Sbjct: 983 KLLRS---SGIEPTITMYSTMVDSLCK 1006
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 194/464 (41%), Gaps = 44/464 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF TY+T++D + + E M +G +AVTY ++++ L G A
Sbjct: 31 GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEA 90
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ E M C P ++++ +K L ++ A V EM+ RG P+ +TVL+
Sbjct: 91 FSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHA 150
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G+ +EA F ++ G PD N +++ KAG ++L+ + E+ +
Sbjct: 151 LCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPT 210
Query: 241 YPVFKEALQTFKVADENDSL--LWQVHPQ--FSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
F A+ A + PQ SP ++ + ++ + G L I GL
Sbjct: 211 VFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCK--AGKLDIALGL 268
Query: 297 VLILLKKKNLVAIDSLLSGI-----MDKSIQLDSAV--ISTIIEVN------CDHRRRDG 343
+ + + A SLL G+ ++++IQL A+ + ++ N C RR D
Sbjct: 269 LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDE 328
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA-GHSLGVYLGALLI 402
A F+ + + + Y L+ L KL P+ VE M + G S V + LI
Sbjct: 329 AFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLI 388
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRK-- 457
L +A R A +++ + + + TY L+ AG + + + ++ M +
Sbjct: 389 QGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREW 448
Query: 458 ------GIH-------------PSLGTFNVLLAGLEKLGRVSDA 482
IH P+L T+N L+ GL K G V DA
Sbjct: 449 RSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 199/480 (41%), Gaps = 48/480 (10%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ Q L + +AW + + G + +RFTY +L+ +A ++ FE M E
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445
Query: 95 K-----------GINID----------AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ +D VTY +++ LS +G V A+ + E M
Sbjct: 446 REWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P ++++ + + L R+ +A +V+K ++RG PN TY+ L++ L + K +EAL++
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQT 250
+KM E G + + + +++ K G +++LR M++ A+ Y +
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625
Query: 251 FKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
+ E LL + + F P ++ TT G L +
Sbjct: 626 RQRLREAVGLLREMLEAGFHPSVVT-------YTTLCHG-----------LCRSGRFDEA 667
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT-AYLALIG 368
+L + + ++ S+I++ C R AL FE + ++ AY ALI
Sbjct: 668 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALID 727
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
L K + E +E M +AG V ++LI+ L A R ++F + E + C
Sbjct: 728 GLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAE-RGCK 786
Query: 429 A---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
A Y A+I Y G A + + M GI + T +++ L R+ +A Y
Sbjct: 787 ADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSY 846
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 184/435 (42%), Gaps = 47/435 (10%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R + F ++++L +A R+ +L++ + V + S+M+ L A V
Sbjct: 270 RDKNSQAGMFAFSSLLHGLCQAHRLEE---AIQLLKAMPCVPNVVCFNSLMNGLCQARRV 326
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR--GLPPNCYTYT 175
D A +++ MK C +++Y +K L R+ EA + E+++R G PN T++
Sbjct: 327 DEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYR-HVELMRRTEGCSPNVVTFS 385
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L++ L AG+ +A E++ +M G+ P++ L+E CKAG++R + M E
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ S W +H SPE V+F+ + P +
Sbjct: 446 R-------------------EWRSSSSWPIH---SPE-------VDFLMVQVCRPTLVTY 476
Query: 295 GLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
++ L K +V LL +++ + D +++++ C +R A F+ +++
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG------VYLGALLIHRLGS 407
Y LI L K+ + +++ +M + G V G L + R+
Sbjct: 537 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 596
Query: 408 ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A + + LP+ TY LI +F +A+ + + M G HPS+ T+
Sbjct: 597 AVVVLRQMRDAGCLPD----AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 652
Query: 468 VLLAGLEKLGRVSDA 482
L GL + GR +A
Sbjct: 653 TLCHGLCRSGRFDEA 667
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 199/489 (40%), Gaps = 59/489 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++ ++ + + E M E G++ D +T+ SV+ L + A N+++
Sbjct: 475 TYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 534
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P +V+Y+ + L ++ EA + +M++ G N TY+ +++ L++ G+
Sbjct: 535 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 594
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
E+A+ + +M++AG PD N LI+ K R + +LR M E + Y
Sbjct: 595 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 654
Query: 245 KEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTT--DIEGPLSIDQGLVLILL 301
L DE +L + +P I+ + V+ + + L + + +
Sbjct: 655 CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 714
Query: 302 KKKNLVAIDSLLSGI-----MDKSIQL-----------DSAVISTIIEVNCDHRRRDGAL 345
+++A +L+ G+ +D++ + D S +I CD R D L
Sbjct: 715 VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 774
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F + + AY A+I F ++EEM G + ++I L
Sbjct: 775 ELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKAL 834
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVY--------------------------- 438
R A F +PED + +Y LI
Sbjct: 835 CGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACN 894
Query: 439 --------FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE-- 488
F AGS + A K+ + M +G P L T+ ++++GL K ++ A Y +E
Sbjct: 895 YMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEML 954
Query: 489 KKSIQADAL 497
+K+++ DA+
Sbjct: 955 RKNLKPDAI 963
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 41/440 (9%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +++ +A R+ F + G VTY++V+ L +VD + EEM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P V+Y + L R KEA + + M G PP T+ ++++ L + G+
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI------ILILRYMKENRLALRY 241
E A + +M + G PD +L+ C+ G +L++ + + A+ Y
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPD---AVTY 179
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQF-SPEFISDNDAVEFVTT--DIEGPL----SIDQ 294
+ L + +L + F SP + AV+ ++ ++ G S+ Q
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 295 GLVLILLKKKNLVAIDSLLSGIM-------------DKSIQLDSAVISTIIEVNCDHRRR 341
V N V D+L+ G+ DK+ Q S+++ C R
Sbjct: 240 TGV-----SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRL 294
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
+ A+ + M + +L+ L + + E+ + M ++G S V +L
Sbjct: 295 EEAIQLLK---AMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNIL 351
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCR-K 457
+ L RR A + L+ + C+ T++ LI +AG ++A ++Y+ M +
Sbjct: 352 LKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVE 411
Query: 458 GIHPSLGTFNVLLAGLEKLG 477
GI P+ T+ LL GL K G
Sbjct: 412 GISPNRFTYAFLLEGLCKAG 431
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 189/462 (40%), Gaps = 55/462 (11%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++++ +A+R+ +F++M+E G + D +TY ++ L + A E M+
Sbjct: 313 FNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMR 372
Query: 129 LKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-RGLPPNCYTYTVLMEYLVRAGK 186
E C P +V+++ ++ L RV +A +VY+ M+ G+ PN +TY L+E L +AG
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432
Query: 187 YEEALEIFSKMQEAG---------------------VQPDKAACNILIEKCCKAGETRTI 225
+ F +M E +P N L+ K+G R
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492
Query: 226 ILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+ +L +M E+ L+ F L ++ D ++ + P ++ + ++
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552
Query: 282 VTTDIEGPLSIDQGLVLI-----LLKKKNLVAIDSLLSGIM----------------DKS 320
++ + +D+ L L+ L + N V +++ G++ D
Sbjct: 553 LSKMAK----MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 608
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+ +T+I+ +R A+ ++ + Y L L + F +
Sbjct: 609 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 668
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGV 437
EI++ M G + + ++ L A R A F + D+ Y+ALI
Sbjct: 669 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 728
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
AG D+A + + M R G P + TF++L+ GL GR+
Sbjct: 729 LCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 168/422 (39%), Gaps = 36/422 (8%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
VTY +++ L AG V A + + PT+V+Y+ + L ++ V + + +E
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M RG PN TY L+ L+ G+ +EA + +M G P+ ++I+ CK GE
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121
Query: 222 TRTIILILRYMKENRLALR---YPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDND 277
++ M + + V AL DE QV F+P+ ++ N
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
V+ + G L G+VL LL + S + T + D
Sbjct: 182 MVDGLYK--AGRLEA-AGMVLQLLAE------------------SFSSPTVFTFT-IAVD 219
Query: 338 HRRRDGALL-AFEYSVKM---DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
+ G L A+E+ M ++ Y ALI L K ++ +
Sbjct: 220 GLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA--- 276
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
G++ + L+H L A R A ++ +P + +L+ A D+A +++
Sbjct: 277 GMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPN-VVCFNSLMNGLCQARRVDEAFELFDV 335
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLY 513
M G + T+N+LL GL KL R+ +A YR + + + S + V I L
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEA--YRHVELMRRTEGCSPNVVTFSTLIQGLCN 393
Query: 514 GG 515
G
Sbjct: 394 AG 395
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 174/433 (40%), Gaps = 48/433 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF D +T +L E R+ + F+ + G DAVTY +++ L AG ++
Sbjct: 135 RGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEA 194
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + + + PT+ ++T + L + A + + M Q G+ PN TY L++
Sbjct: 195 AGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALID 254
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +AGK + AL + +++ Q A + L+ C+A I +L+ M +
Sbjct: 255 GLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVV 311
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L + DE A E E S D I
Sbjct: 312 CFNSLMNGLCQARRVDE---------------------AFELFDVMKESGCSADVITYNI 350
Query: 300 LLKKKNLVAIDSLLSG-----IMDKSIQLDSAVI--STIIEVNCDHRRRDGALLAFEYSV 352
LL K L + + +M ++ V+ ST+I+ C+ R + A +E V
Sbjct: 351 LL--KGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408
Query: 353 KMD-LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
++ ++ R Y L+ L K ++ + E+M + S+ P
Sbjct: 409 AVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLER-------------EWRSSSSWP 455
Query: 412 VPAAKIFSLLPEDQKCT-ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+ + ++ L+ + + T TY L+ +G AL + + M G+ P + TFN +L
Sbjct: 456 IHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVL 515
Query: 471 AGLEKLGRVSDAE 483
GL K R+ DA
Sbjct: 516 DGLCKEQRILDAH 528
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RSRG + D TYT M+ +AK++ FE M K + DA+ Y+S++ A V
Sbjct: 919 RSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKV 978
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A W+ ++ PTI Y+ + L N +A +V +EM + P + +T L
Sbjct: 979 DDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSL 1035
Query: 178 MEYLVRAGKYEEALEIFSKMQ 198
V G+ +EA+++ + +Q
Sbjct: 1036 ATAYVAEGRVDEAVKLVNDLQ 1056
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D +Y T++ ++R + M G + DA Y +VM L AG + A +
Sbjct: 855 RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL 914
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+EM+ + P + +YT + L ++ A D ++EM+++ L P+ Y+ L++ +
Sbjct: 915 LQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCK 974
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
A K ++A ++ ++ +G++P + +++ CK T + ++R MK
Sbjct: 975 ADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMK 1021
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D Y T++D +A + + M+ +G + D TYT ++ LS A + A
Sbjct: 887 GGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLA 946
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +EEM K P + Y++ + D+V D +K + G+ P Y+ +++
Sbjct: 947 CDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD---DAWKLLRSSGIEPTITMYSTMVDS 1003
Query: 181 LVRAGKYEEALEIFSKMQEAGVQP 204
L + ++ALE+ +M+ +P
Sbjct: 1004 LCKNRGTDKALEVIREMKSKNCEP 1027
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 27/357 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D YTT++ F + +S+ +F+ M+ K I D VTYTSV+H + +G +
Sbjct: 339 RKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKM 398
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A ++ EM +K P V+YTA + +KEA V+ +M+Q+GL PN TYT L
Sbjct: 399 VEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTAL 458
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L + G+ + A E+ +M G+QP+ N ++ CK G + + M+E L
Sbjct: 459 ADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTV---KLMEEMDL 515
Query: 238 ALRYP-------VFKEALQTFKVADENDSLLWQVHPQFSPEFISDN-------------D 277
A YP + + ++A ++ L ++ + P ++ N D
Sbjct: 516 AGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLED 575
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLK----KKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ +E + + L+K K N+ A + + D+ + DS + +I+
Sbjct: 576 GERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIK 635
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+C R A + V+ ++ Y ALI K F + ++ EEM K G
Sbjct: 636 GHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHG 692
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 154/402 (38%), Gaps = 59/402 (14%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VFE E G+ + V+ V+H L G V A N+ +M + +P +VSY +
Sbjct: 229 VFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYC 288
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ + + E+ +GL P+ Y Y ++ L + G+ EA ++ M++ GV PD
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+I CK G + M+ ++
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIV----------------------------- 379
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
P+ ++ T+ I G + K +V + + ++ K ++ D
Sbjct: 380 --PDIVT-------YTSVIHG-----------ICKSGKMVEAREMFNEMLVKGLEPDEVT 419
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I+ C A V+ L Y AL L K E++ EM+
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479
Query: 388 KAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSL---LPEDQKCTATYTALIGVYFSA 441
+ G VY +++ ++G+ + V + L P+ T TYT L+ Y
Sbjct: 480 RKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD----TITYTTLMDAYCKM 535
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G KA ++ + M K + P+L TFNVL+ G G + D E
Sbjct: 536 GEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE 577
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 81 RISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
RI + V +L+ E KG+ D Y +++ L G+V A + M+ +P V
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
YT + V A ++ EM ++ + P+ TYT ++ + ++GK EA E+F++M
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408
Query: 198 QEAGVQPDKAACNILIEKCCKAGETR 223
G++PD+ LI+ CKAGE +
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMK 434
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++ F + + + + E M EKGI +A T+ S+M ++ I++ M
Sbjct: 559 TFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAM 618
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +Y +K +KEA ++KEM+++G TY L+ + K+
Sbjct: 619 HDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKF 678
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE 214
EA ++F +M++ G+ +K +I ++
Sbjct: 679 VEARKLFEEMRKHGLVAEKDIYDIFVD 705
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 183/435 (42%), Gaps = 61/435 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG + F Y ++ KRI + +F+ M + VTY +++ G++
Sbjct: 203 RKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGEL 262
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + E MK K P I+++ + + L ++KEA + KEM G P+ YTY++L
Sbjct: 263 DAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSIL 322
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L+R A+E++ + E G++ + +IL+ CK G+ IL+ EN L
Sbjct: 323 FDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGL 382
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
VADE +++ FV G
Sbjct: 383 ---------------VADE---VIYNT----------------FVN-----------GYC 397
Query: 298 LILLKKKNLVAIDSLLS-GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
I K ++ I+ + S G+ SI +S +I+ CD + D A + + +
Sbjct: 398 RIGDMNKAILTIERMESFGLRPNSITFNS-----LIDKFCDMKEMDKAEEWVKKMAEKGV 452
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y LI KL TF + +I+E+M + G V LI+ L + + A
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEI 512
Query: 417 IF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+ +LP Q Y LI G AL+ + M R I P+L T+NVL+
Sbjct: 513 VLRDMICRGVLPNAQ----VYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLI 568
Query: 471 AGLEKLGRVSDAEIY 485
GL K G++++AE +
Sbjct: 569 DGLCKKGKLTEAEDF 583
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 172/454 (37%), Gaps = 71/454 (15%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M KA L + S G + T+ +++D F + K + + + M EKG+ TY
Sbjct: 402 MNKAILTIERM-ESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYN 460
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ D I E+M+ P +VSY + + L + ++ EA V ++MI R
Sbjct: 461 TLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR 520
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN Y +L++ GK ++AL F +M + + P N+LI+ CK G
Sbjct: 521 GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKG----- 575
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
K+ + D L SP+ I+ N +
Sbjct: 576 --------------------------KLTEAEDFLTQITSSGHSPDVITYNSLISGYAN- 608
Query: 286 IEGPLSIDQGLVLILLK---KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
G +S GL + K + L+SG + I+L + + +++
Sbjct: 609 -AGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQ--------- 658
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG--------HSLG 394
M+L +R Y A+I ++ K + + M G +SL
Sbjct: 659 -----------MNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSL- 706
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
LG +L + + V K L P+ TY L+ + A Y+ M
Sbjct: 707 -ILGHFREGKLSNIKDLVNNMKAKELAPK----ADTYDILVKGHCDLKDFSGAYVWYREM 761
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
P+ N L AGLE+ GR+ + ++ E
Sbjct: 762 VENNFLPNASICNELTAGLEQEGRLQEVQVICSE 795
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKR 81
+++ ++ +S T N ++ M++ WV + +G TY T++D +G+
Sbjct: 412 MESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCT 471
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
+ E M+E G+ + V+Y S+++ L G + A + +M + P Y
Sbjct: 472 FDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNM 531
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ + +VK+A + EM++ + P TY VL++ L + GK EA + +++ +G
Sbjct: 532 LIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMK 233
PD N LI AG + + MK
Sbjct: 592 HSPDVITYNSLISGYANAGNVSKCLGLYETMK 623
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y I +KL E ++ M K G V++ +LI L +R A K+F
Sbjct: 179 YAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMF---- 234
Query: 423 EDQKCT-------ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
D+ C TY LI Y G D A K+ + M K + P++ TFN LL+GL K
Sbjct: 235 -DEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCK 293
Query: 476 LGRVSDAEIYRKE 488
+ ++ +A KE
Sbjct: 294 MRKMKEARSLLKE 306
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 57/138 (41%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
DR Y M+ + E + + M ++GI+ D +TY S++ G + ++
Sbjct: 664 DRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLV 723
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
MK KE P +Y +K A Y+EM++ PN L L +
Sbjct: 724 NNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQE 783
Query: 185 GKYEEALEIFSKMQEAGV 202
G+ +E I S+M G+
Sbjct: 784 GRLQEVQVICSEMNVKGI 801
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/222 (18%), Positives = 84/222 (37%), Gaps = 34/222 (15%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI--------------------- 97
S G + D TY +++ + A +S ++E M+ GI
Sbjct: 589 SSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIEL 648
Query: 98 -----------NI--DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
N+ D V Y +++H + G+ A ++ + M + +P ++Y + +
Sbjct: 649 VEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLIL 708
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
F ++ D+ M + L P TY +L++ + A + +M E P
Sbjct: 709 GHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLP 768
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ + CN L + G + + +I M + +P +E
Sbjct: 769 NASICNELTAGLEQEGRLQEVQVICSEMNVKGIINHWPSKEE 810
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 194/484 (40%), Gaps = 64/484 (13%)
Query: 42 THPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINID 100
T ++KA+ LF + R G + TYTT++D +A+ + + VF+ M +KG+ D
Sbjct: 215 TEGQVDKAYNLFLEMMDR--GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272
Query: 101 AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK 160
TY ++H + G V + EEM P +Y + + L N R +EA ++
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKY--------------------------------- 187
MI++G+ PN Y +L+ G
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392
Query: 188 --EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+EA+ IF+KM++ G+ PD LI+ CK G +L M +A VF
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDN---DAVEFVTTDIEGPLSIDQGLVLILLK 302
+ D+ W+ +F E ++ D V F T +L L
Sbjct: 453 SLVYGLCTVDK-----WEKAKEFYFEMLNQGIRPDVVFFNT-------------ILCNLC 494
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K V L +M++ + VIS T+I +C R D A + + + + L +
Sbjct: 495 TKGQVMKAQRLIDLMER-VGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDE 553
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-- 418
Y L+ + + EM + G + GV + ++H L + RR A +++
Sbjct: 554 WTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLN 613
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ Q Y ++ D+A K+++++C K + TFN+++ L K GR
Sbjct: 614 MITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGR 673
Query: 479 VSDA 482
DA
Sbjct: 674 NEDA 677
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 189/442 (42%), Gaps = 37/442 (8%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
S+ R + +Y +++ F ++ +F M ++GI + VTYT+V+ L A
Sbjct: 194 SQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
VD A ++++M K P +Y + + KE + +EM GL P+CYTY
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ YL G+ EA +F M G++P+ A ILI G + +L M EN
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373
Query: 237 LALRYPVFKEALQTF---KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSI 292
L+ + +F + + DE + ++ Q SP+ +
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDV-------------------V 414
Query: 293 DQGLVLILLKKKNLVAIDSLL--SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+ G ++ L K V D++L + +M++ + + V ++++ C + + A +
Sbjct: 415 NYGALIDALCKLGRVD-DAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFE 473
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL------GALLIHR 404
+ + + + ++ L K +++ M + G GV G L+ R
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGR 533
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
+ A + + L P++ TY L+ Y AG D A +++ M R GI P +
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEW----TYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589
Query: 465 TFNVLLAGLEKLGRVSDA-EIY 485
T++ +L GL R S+A E+Y
Sbjct: 590 TYSTILHGLFTTRRFSEAKELY 611
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/480 (21%), Positives = 187/480 (38%), Gaps = 62/480 (12%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY+ ++ F R+ F L+ + G ++ + ++ L +A + A++I
Sbjct: 93 DPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDIL 152
Query: 125 -EEMKLKECYPTIVSYTAYMK--------------------------------------I 145
+ M C P +VSY +K
Sbjct: 153 VKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVING 212
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
F +V +A +++ EM+ RG+ PN TYT +++ L +A + A +F +M + GV+PD
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADEN----D 258
N LI G+ + ++ +L M + L Y L E D
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332
Query: 259 SLLWQ-VHPQFSPEFI---------SDNDAVEFVTTDIEGPLSIDQGLVLILL----KKK 304
S++ + + P + I + ++ + + +E LS D + I+ KK
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + + + + + D +I+ C R D A+L F + + +
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE- 423
+L+ L ++ + K E EM G V ++ L + + + A ++ L+
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512
Query: 424 -DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ +YT LIG + G D+A K M G+ P T+N LL G + GR+ DA
Sbjct: 513 GTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDA 572
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 4/203 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++ ++ +K D +T N +L + ++ A+ F + R+ G TY+T+L
Sbjct: 542 DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN-GITPGVVTYSTILHGLFT 600
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+R S K ++ M G + Y +++ LS VD A +++ + K+ I +
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ + LF + R ++A ++ + GL P+ +TY ++ E L+ G EE ++FS M+
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720
Query: 199 EAGVQPDKAACNILIEKCCKAGE 221
++G P+ N L+ + G+
Sbjct: 721 KSGTTPNSRMLNALVRRLLHRGD 743
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 142/360 (39%), Gaps = 22/360 (6%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTI 225
+ P+ TY++L+ R G+ E F + ++G + + N L++ C A +
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
++++ M E + L+ F + L +H + S V
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I G + Q + K NL +MD+ IQ + +T+I+ C + D A
Sbjct: 210 INGFFTEGQ-----VDKAYNL------FLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAE 258
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ + + + Y LI + + + +V ++EEM+ G Y L++ L
Sbjct: 259 GVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYL 318
Query: 406 GSARRPVPAAKIF-SLLPEDQK-CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ R A +F S++ + K A Y LI Y + G+ + + M G+ P
Sbjct: 319 CNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDH 378
Query: 464 GTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV---PMEEKICDLLYGGDGVL 519
FN++ K + +A I+ K K+ LS D V + + +C L D VL
Sbjct: 379 HIFNIIFTAYAKKAMIDEAMHIFNKMKQQ----GLSPDVVNYGALIDALCKLGRVDDAVL 434
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 185/441 (41%), Gaps = 20/441 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ ++ A ++ + E M G+ D T+T+VM GD+DGA
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI-QRGLPPNCYTYTVLME 179
+ I E+M C + VS + RV++A + +EM Q G P+ YT+ L+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +AG + A+EI M + G PD N +I CK GE + + +L M +
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + T + EN QV + + + D+ S+ QGL L
Sbjct: 364 NTVTYNTLIST--LCKEN-----QVEEATELARVLTSKG---ILPDVCTFNSLIQGLCLT 413
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ + VA++ L + K + D + +I+ C + D AL +
Sbjct: 414 ---RNHRVAME-LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y LI K N + EI +EM G S LI L +RR AA++
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 419 SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
++ E QK TY +L+ + G KA I + M G P + T+ L++GL K G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 478 RVSDAEIYRKEKKSIQADALS 498
RV E+ K +SIQ ++
Sbjct: 590 RV---EVASKLLRSIQMKGIN 607
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 196/474 (41%), Gaps = 88/474 (18%)
Query: 31 WDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
W + +VN ++ +E A F +S GF D++T+ T+++ +A +
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ ++M ++G + D TY SV+ L G+V AV + ++M ++C P V+Y + L
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++V+EAT++ + + +G+ P+ T+ L++ L + A+E+F +M+ G +PD+
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
N+LI+ C G+ + +L+ M+ + A + + F A++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR--------- 487
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
E I D V V+ +N V ++L+ G+
Sbjct: 488 -EAEEIFDEMEVHGVS--------------------RNSVTYNTLIDGL----------- 515
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
C RR + A + + ++ Y +L+ + K A+IV+ MT
Sbjct: 516 --------CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
G + TY LI AG + A
Sbjct: 568 SNGCEPDI---------------------------------VTYGTLISGLCKAGRVEVA 594
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK--EKKSIQADALS 498
K+ +++ KGI+ + +N ++ GL + + ++A ++R+ E+ DA+S
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + + TY T++D +++R+ + + M +G D TY S++ GD+
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +I + M C P IV+Y + L RV+ A+ + + + +G+ + Y +++
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Query: 180 YLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKAG 220
L R K EA+ +F +M E PD + I+ C G
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 30 KWDSYTVNQVLKTH----PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
K D YT N +L TH ++KA ++ S G D TY T++ +A R+
Sbjct: 537 KPDKYTYNSLL-THFCRGGDIKKAADIVQAMT-SNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSY-TAYM 143
+ +Q KGIN+ Y V+ L A+N++ EM + E P VSY +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK-MQEA 200
+ ++EA D E++++G P + +L E L+ E +++ + MQ+A
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 193/452 (42%), Gaps = 29/452 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G D +L + R+ K VF ++ GI+ D +TYT ++ S A +
Sbjct: 443 KSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNA 502
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I+ EM C P +++ + + +L+ R EA ++ E+ + L P TY L
Sbjct: 503 DEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTL 562
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L R GK +E +++ M P+ N +++ CK GE + +L M N
Sbjct: 563 LAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGC 622
Query: 238 ALRYPVFKEALQTFKVADENDSLLW---QVHPQFSPEFISDNDAV-EFVTTDI-EGPLSI 292
+ + D W Q+ +P++ + + FV + + + L
Sbjct: 623 MPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHT 682
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIM-----DKSIQ-----------LDSAVISTIIEVNC 336
+ +L K + ++ SL+ GI+ +KSI+ LD +S II C
Sbjct: 683 VREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFC 742
Query: 337 DHRRRDGALLAFEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
H+ AL A E K + ++L+ +Y ALI L+ + E+ EM + G
Sbjct: 743 KHKE---ALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDP 799
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
+ L++ +G + R KI + + TY +I + D+A+ +Y
Sbjct: 800 DEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLY 859
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ +G P+ T+ LL GL K G + DAE
Sbjct: 860 YQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAE 891
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 185/424 (43%), Gaps = 30/424 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T+ G + S +M+E GI ++A TY ++++L +G A+++++ M
Sbjct: 138 TFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAM 197
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
PT+ +Y+ M + + EM RG+ PN Y+YT+ + L +AG+
Sbjct: 198 AADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRL 257
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EEA I KM+E G +PD +LI+ C AG + MK + +
Sbjct: 258 EEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITL 317
Query: 248 LQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLS-IDQGL-VLILLKKK 304
L K D DS + ++ + +DN D + +D+ L V +K+K
Sbjct: 318 LD--KCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK 375
Query: 305 NLV----AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG--ALLAFEYSVKMDLNL 358
++ + +SL+SG + K+ + + A + +N +G +L Y K +L
Sbjct: 376 GIIPQQYSYNSLISGFL-KADRFNRA-LELFNHMNIHGPTPNGYTHVLFINYHGKSGESL 433
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ L+ K IV ++ AG++ V G RLG A+R K
Sbjct: 434 KALKRYELM----------KSKGIVPDVV-AGNA--VLYGLAKTGRLGMAKRVFHELKAM 480
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ P++ TYT +I A +AD+A+KI+ M P + N L+ L K GR
Sbjct: 481 GISPDN----ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGR 536
Query: 479 VSDA 482
++A
Sbjct: 537 GNEA 540
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY +LD G++ RI M + E M KG VTY +++ L + +D A
Sbjct: 796 GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 855
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+N++ ++ + PT +Y + L + +++A ++ EM++ G PNC Y +L+
Sbjct: 856 INLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNG 915
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
AG E+ E+F M E G+ PD + ++I+ C G
Sbjct: 916 YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADG 955
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 2/191 (1%)
Query: 33 SYTVN-QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
SYT+ +VL +E+A+ + G D T T ++ I +A R++ K VF
Sbjct: 243 SYTICIRVLGQAGRLEEAYRILRKMEE-EGCKPDVVTNTVLIQILCDAGRLADAKDVFWK 301
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ D VTY +++ ++GD IW +K +VSYTA + L R
Sbjct: 302 MKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGR 361
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V EA DV+ EM Q+G+ P Y+Y L+ ++A ++ ALE+F+ M G P+ +
Sbjct: 362 VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVL 421
Query: 212 LIEKCCKAGET 222
I K+GE+
Sbjct: 422 FINYHGKSGES 432
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W ++ DR TY T+LD G++ S+ ++ ++ G N + V+YT+ + L
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQV 359
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G VD A+++++EMK K P SY + + DR A +++ M G PN YT+
Sbjct: 360 GRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTH 419
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ + Y ++G+ +AL+ + M+ G+ PD A N ++ K G
Sbjct: 420 VLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTG 465
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 195/450 (43%), Gaps = 60/450 (13%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V + G + +TY ++ ++ V++ M G+ TY+ +M
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRR 220
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D + V + EM+ + P + SYT +++L R++EA + ++M + G P+ T T
Sbjct: 221 DAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNT 280
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
VL++ L AG+ +A ++F KM+ + +PD+ L++KC +G++R++
Sbjct: 281 VLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSV---------- 330
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
E K ND+++ + + DA+ V +D+
Sbjct: 331 ---------SEIWNALKADGYNDNVV---------SYTAAVDALCQVG-------RVDEA 365
Query: 296 L-VLILLKKKNLV----AIDSLLSGIM-----DKSIQLDSAV---------ISTIIEVNC 336
L V +K+K ++ + +SL+SG + +++++L + + + ++ +N
Sbjct: 366 LDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINY 425
Query: 337 DHRRRDG--ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
+ + AL +E + + A A++ L K + E+ G S
Sbjct: 426 HGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPD 485
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA---LIGVYFSAGSADKALKIY 451
++I A A KIF+ + E+ +C A LI + + AG ++A KI+
Sbjct: 486 NITYTMMIKCCSKASNADEAMKIFAEMIEN-RCAPDVLAMNSLIDMLYKAGRGNEAWKIF 544
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ + P+ T+N LLAGL + G+V +
Sbjct: 545 YELKEMNLEPTDCTYNTLLAGLGREGKVKE 574
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF+ TY +LD + I + +F+ M E G + Y +++ AGD +
Sbjct: 864 SEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTE 923
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
++E M + P I SYT + L + R+ + +K++ GL P+ TY +L+
Sbjct: 924 KVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L ++G+ EEAL +++ M++ G+ P+ N LI KAG+
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKA 1027
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 77/148 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N D +YT ++D R++ F+ + + G+ D +TY ++H L +G ++
Sbjct: 935 QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEE 994
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ +M+ K P + +Y + + L + EA +Y+E++ +G PN +TY L+
Sbjct: 995 ALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIR 1054
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+G E A + +M G +P+ +
Sbjct: 1055 GYSVSGSPENAFAAYGRMIVGGCRPNSS 1082
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 80/145 (55%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +L+ + A + +FE M E+G+N D +YT V+ L G ++ ++ ++++
Sbjct: 909 YNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 968
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +++Y + L + R++EA +Y +M ++G+ PN YTY L+ YL +AGK
Sbjct: 969 DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAA 1028
Query: 189 EALEIFSKMQEAGVQPDKAACNILI 213
EA +++ ++ G +P+ N LI
Sbjct: 1029 EAGKMYEELLAKGWKPNVFTYNALI 1053
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F M+ G + D TY ++ + + ++ + I EEM K T V+Y + L
Sbjct: 788 LFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLV 847
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ + EA ++Y +++ G P TY L++ L++ G E+A +F +M E G +P+ A
Sbjct: 848 KSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCA 907
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRL 237
NIL+ AG+T + + M E +
Sbjct: 908 IYNILLNGYRIAGDTEKVCELFESMVEQGM 937
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 174/431 (40%), Gaps = 42/431 (9%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T+ I R MK ++E + D+ S +H L ++G + K
Sbjct: 660 YATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSL-----MEGILKRDGTEK 714
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKE---------ATDVYKEMIQRGLPPNCYTYTVLME 179
E I S + LFL+ ++ A ++ K+ G+ +Y L+
Sbjct: 715 SIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALIC 774
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
LV + A E+FS+M+ G PD+ +++++ K+ ++ I M
Sbjct: 775 GLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKS 834
Query: 240 RYPVFK---EALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y + L K+ DE +L +Q+ + FSP T GPL +D
Sbjct: 835 TYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSP------------TPCTYGPL-LDG- 880
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
LLK N+ ++L +++ + + A+ + ++ + FE V+
Sbjct: 881 ----LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+N + +Y +I L +++T G + LLIH LG + R A
Sbjct: 937 MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 416 KIFSLLPEDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
+++ + ++K A TY +LI AG A +A K+Y+ + KG P++ T+N L+
Sbjct: 997 SLYNDM--EKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIR 1054
Query: 472 GLEKLGRVSDA 482
G G +A
Sbjct: 1055 GYSVSGSPENA 1065
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++ G++ R+ ++ M++KGI + TY S++ +L AG A
Sbjct: 971 GLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEA 1030
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
++EE+ K P + +Y A ++ ++ + A Y MI G PN TY L
Sbjct: 1031 GKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 194/438 (44%), Gaps = 47/438 (10%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +++D + ++ + KYVF M + G+ + TYT+++ L VD A++++
Sbjct: 307 DVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLF 366
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEMK K P IV+YT+ + L N ++ A + K+M ++G+ P+ Y+YT+L++ L +
Sbjct: 367 EEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 426
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA---GETRTIILILRYMKENRLALRY 241
G+ E A E F ++ G + N++I CKA GE + L+ E + +
Sbjct: 427 GRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEA----MDLKSKMEGKGCMPD 482
Query: 242 PV-FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI---DQGLV 297
+ FK + DEND ++ E + ++ + + +V
Sbjct: 483 AITFKTIICALFEKDENDK--------------AEKILREMIARGLQEARKVRLKEAKIV 528
Query: 298 LILLKKK----NLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCD 337
L ++ K ++V +L+ G + + + + +I+ C
Sbjct: 529 LAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCK 588
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+ D A+ FE ++ Y +LI L K + + +++EM + G VY
Sbjct: 589 KKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYS 648
Query: 398 GALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
+L+ L + R A +IF L+ YTA+I AG D+AL + M
Sbjct: 649 YTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKME 708
Query: 456 RKGIHPSLGTFNVLLAGL 473
KG P TF++++ L
Sbjct: 709 DKGCMPDAVTFDIIIWAL 726
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A+ N + + + N D T+ T++D G+ ++ + K V +M + I D VTY
Sbjct: 254 LKEAFSLLNEM-KLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYN 312
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ V A ++ M P + +YT + L V EA +++EM +
Sbjct: 313 SLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYK 372
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ P+ TYT L++ L + E A+ + KM+E G+QPD + IL++ CK G
Sbjct: 373 NMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGG 427
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 170/406 (41%), Gaps = 18/406 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG++ + T T++ I Y + + +G ++ V+Y ++++ L G+
Sbjct: 127 RGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKA 186
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +++ P +V Y + L N + +A D+Y EMI +G+ PN TY L+
Sbjct: 187 VARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVY 246
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G +EA + ++M+ + PD N LI+ K G+ + ++L M +
Sbjct: 247 GFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMK----- 301
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
K + T+ + L +V + +++ + A VT ++ ++ GL
Sbjct: 302 --ACIKPDVVTYNSLIDGYFFLNKVK---NAKYVFYSMAQSGVTPNVRTYTTMIDGLC-- 354
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K+K + SL + K++ D +++I+ C + + A+ + + + +
Sbjct: 355 --KEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 412
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+Y L+ L K E + + G+ L V ++I+ L A A + S
Sbjct: 413 VYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKS 472
Query: 420 LLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
+ E + C T+ +I F DKA KI + M +G+ +
Sbjct: 473 KM-EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEA 517
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 195/465 (41%), Gaps = 49/465 (10%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
K L+F+ ++GF ++ +Y T+++ + ++ + ++ + D V Y ++
Sbjct: 150 KKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI 209
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H L + A +++ EM +K P +V+Y A + + +KEA + EM + +
Sbjct: 210 IHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNI 269
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ T+ L++ L + GK + A + + M +A ++PD N LI+ + +
Sbjct: 270 NPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKY 329
Query: 228 ILRYMKENRLALR---YPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVT 283
+ M ++ + Y + L K+ DE SL ++ + P+ ++ T
Sbjct: 330 VFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVT-------YT 382
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ I+G L K +L +L + ++ IQ D + +++ C R +
Sbjct: 383 SLIDG-----------LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH-----SLGVYLG 398
A F+ + +L Y +I L K + F + ++ +M G + +
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIIC 491
Query: 399 AL---------------LIHR-LGSARR-PVPAAKIFSLLPEDQKC----TATYTALIGV 437
AL +I R L AR+ + AKI L + C TY L+
Sbjct: 492 ALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIV-LAVMTKACIKPDVVTYGTLMDG 550
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
YF A ++ +M + G+ P++ + +++ GL K V +A
Sbjct: 551 YFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEA 595
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 36/219 (16%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTML------DIFGEAKRISSMKYVFELMQEKGINI 99
+E A FF + +G++ + TY M+ D+FGEA + S M+ KG
Sbjct: 429 LENAKEFFQRL-LVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSK------MEGKGCMP 481
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEM-----------KLKE-----------CY-PTI 136
DA+T+ +++ L + D A I EM +LKE C P +
Sbjct: 482 DAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDV 541
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
V+Y M FL + +K A V+ M Q G+ PN YT++++ L + +EA+ +F +
Sbjct: 542 VTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEE 601
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
M+ + P+ LI+ CK I +L+ MKE+
Sbjct: 602 MKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEH 640
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 134/357 (37%), Gaps = 74/357 (20%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D ++YT +LD + R+ + K F+ + KG +++ TY +++ L A
Sbjct: 405 KEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLF 464
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL---------- 167
A+++ +M+ K C P +++ + LF D +A + +EMI RGL
Sbjct: 465 GEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKE 524
Query: 168 -------------PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
P+ TY LM+ + + A +F M + GV P+ I+I+
Sbjct: 525 AKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMID 584
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFI 273
CK K DE SL ++ H P +
Sbjct: 585 GLCKK--------------------------------KTVDEAMSLFEEMKHKNMFPNIV 612
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ ++ L K +L +LL + + IQ D + +++
Sbjct: 613 TYTSLID------------------ALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 654
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
C R +GA F+ + +L Y A+I L K F + ++ +M G
Sbjct: 655 GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKG 711
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 11 ILKYSTWDSAQDLL-----KNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ K T D A L KN+ +YT ++ + K H +E+A + + G
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHH-LERAIALLKEM-KEHGIQ 643
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D ++YT +LD ++ R+ K +F+ + KG +++ YT++++ L AG D A+++
Sbjct: 644 PDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDL 703
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+M+ K C P V++ + LF D +A + EMI RGL
Sbjct: 704 QXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/423 (18%), Positives = 157/423 (37%), Gaps = 59/423 (13%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
F + +L K ++ +F+ + G D T +M+ + + A ++
Sbjct: 64 FHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLAN 123
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ + +P ++ +K L +K+A + +++ +G N +Y L+ L + G+
Sbjct: 124 ILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGE 183
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ + K++ V+PD N +I CK N+L
Sbjct: 184 TKAVARLLRKLEGHSVKPDVVMYNTIIHSLCK----------------NKL--------- 218
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ D D + SP ++ N LV +L
Sbjct: 219 ------LGDACDLYSEMIVKGISPNVVTYN------------------ALVYGFCIMGHL 254
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
SLL+ + K+I D +T+I+ + A + +K + + Y +L
Sbjct: 255 KEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSL 314
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SL 420
I LN + M ++G + V +I L + A +F ++
Sbjct: 315 IDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNM 374
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+P+ TYT+LI ++A+ + K M +GI P + ++ +LL L K GR+
Sbjct: 375 IPD----IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 430
Query: 481 DAE 483
+A+
Sbjct: 431 NAK 433
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
TV++ + M+ +F N V TYT+++D + + + + M+E
Sbjct: 591 TVDEAMSLFEEMKHKNMFPNIV-----------TYTSLIDALCKNHHLERAIALLKEMKE 639
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
GI D +YT ++ L +G ++GA I++ + +K + + YTA + L E
Sbjct: 640 HGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDE 699
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
A D+ +M +G P+ T+ +++ L + ++A +I +M G+ +
Sbjct: 700 ALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/458 (17%), Positives = 164/458 (35%), Gaps = 58/458 (12%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D T +++ F I+ V + ++G + +A+T +++ L G++
Sbjct: 91 SNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIK 150
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ +++ + VSY + L K + +++ + P+ Y ++
Sbjct: 151 KALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTII 210
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + +A +++S+M G+ P+ N L+ C G + +L MK +
Sbjct: 211 HSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNIN 270
Query: 239 LRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
F + K+ L + P+ ++ N ID
Sbjct: 271 PDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSL-------------IDG 317
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L +K V SG+ + +T+I+ C + D A+ FE
Sbjct: 318 YFFLNKVKNAKYVFYSMAQSGVTP-----NVRTYTTMIDGLCKEKMVDEAMSLFEEMKYK 372
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
++ + Y +LI L K + + + ++M + G VY
Sbjct: 373 NMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY------------------ 414
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+YT L+ G + A + ++ + KG H ++ T+NV++ GL
Sbjct: 415 ---------------SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC 459
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLL 512
K +A K ++ DA+ + IC L
Sbjct: 460 KADLFGEA---MDLKSKMEGKGCMPDAITFKTIICALF 494
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 186/438 (42%), Gaps = 51/438 (11%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA F+ ++R +G D TY ++D +A+ + + V M G D VTY+ +
Sbjct: 283 KACSLFHEMTR-QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCM 341
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H + G + A ++ EMK + P IV+ +++ L + R KEA + + M +G
Sbjct: 342 IHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH 401
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ ++Y L+ G + + + +F+ M+ G+ + ILI K G +L
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAML 461
Query: 228 ILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
I M++ ++ + + TF ++ D++ + Q I N AV
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAM--EKFNQMVARGIQPNTAVYS----- 514
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI-QLDSAVISTIIEVNCDHRRRDGAL 345
SI QG + LV L+S +++K I + D S++I C R A
Sbjct: 515 ----SIIQGFCM----HGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAH 566
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ + + ER + TF + + G L+ ++
Sbjct: 567 DIFDLATDIG---ERPGVI----------TFNSLID----------------GYCLVGKM 597
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
A + + A ++ + P+ TY L+ YF G + L +++ M RKG+ P+ T
Sbjct: 598 DKAFKILDAMEVVGVEPD----IVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Query: 466 FNVLLAGLEKLGRVSDAE 483
+ ++LAGL + GR A
Sbjct: 654 YGIMLAGLFRAGRTVAAR 671
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 188/443 (42%), Gaps = 62/443 (13%)
Query: 65 DRFTYTTMLDIF---GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D Y+T++ F GE + S+ F M +G+ D VTY ++ L A +D A
Sbjct: 264 DVVAYSTVIHGFFNEGETGKACSL---FHEMTRQGVKPDVVTYNLIIDALCKARAMDKAE 320
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ +M P V+Y+ + R+KEA +++EM +RGL PN T + L
Sbjct: 321 LVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASL 380
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ G+ +EA E F M G +PD + L+ G +I + MK N +A
Sbjct: 381 CKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANC 440
Query: 242 PVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
VF + + K +D++L + + + +S D V + T + S L +
Sbjct: 441 HVFTILIHAYAKRGMVDDAML--IFTEMQQQGVSP-DVVTYST--VISTFSRMGRLTDAM 495
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K +VA + IQ ++AV S+II+ C H G L+
Sbjct: 496 EKFNQMVA----------RGIQPNTAVYSSIIQGFCMH----GGLV-------------- 527
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKIFS 419
K E+V EM G + + +I+ L R + A IF
Sbjct: 528 -----------------KAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFD 570
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L + ++ T+ +LI Y G DKA KI M G+ P + T+N LL G K G
Sbjct: 571 LATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNG 630
Query: 478 RVSDA-EIYRK-EKKSIQADALS 498
R++D ++R+ ++K ++ + ++
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVT 653
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 173/464 (37%), Gaps = 62/464 (13%)
Query: 49 AWLFFNWVSRSRGFNH----DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
A FN V R TY ++D A+R +F + G+ +D +T
Sbjct: 136 ALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITA 195
Query: 105 TSVMHWLSNAGDVDGAVNI-WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+++ L A + AVN+ M C P VSY+ +K L N + A D+ + M
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255
Query: 164 QRG--LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++G P+ Y+ ++ G+ +A +F +M GV+PD N++I+ CKA
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315
Query: 222 TRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDN- 276
L+LR M + + Y T E + ++ + P ++ N
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNS 375
Query: 277 ------------DAVEF---VTTDIEGPLSIDQGLVLILLKKKNLVA-IDSLLSGIMDKS 320
+A EF +T P +L + A + L + +
Sbjct: 376 FLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNG 435
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I + V + +I D A+L F + ++ + Y +I +TF ++
Sbjct: 436 IAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI------STFSRMG 489
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFS 440
+ + M K + AR P TA Y+++I +
Sbjct: 490 RLTDAMEKFNQMV--------------ARGIQPN-------------TAVYSSIIQGFCM 522
Query: 441 AGSADKALKIYKTMCRKGI-HPSLGTFNVLLAGLEKLGRVSDAE 483
G KA ++ M KGI P + F+ ++ L K GRV DA
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAH 566
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 76/150 (50%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
++++++ + R+ +F+L + G +T+ S++ G +D A I + M+
Sbjct: 549 FSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAME 608
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ P IV+Y + F N R+ + +++EM ++G+ PN TY +++ L RAG+
Sbjct: 609 VVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTV 668
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCK 218
A + F +M E+G + I++ C+
Sbjct: 669 AARKKFHEMIESGTTVTVSIYGIILGGLCR 698
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D ++ + ++ D T N +L + + F + R +G + TY ML
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQR-KGVKPNTVTYGIMLAGLFR 663
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A R + + F M E G + Y ++ L D A+ +++++ +I
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITI 723
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ ++ R +EA +++ + GL PN TY V++ L++ G E+A +FS M+
Sbjct: 724 LNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSME 783
Query: 199 EAGVQPDKAACNILIEKCCKAGE 221
++G+ P N +I + GE
Sbjct: 784 KSGIVPGSRLLNRIIRMLLEKGE 806
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++D + ++ + + M+ G+ D VTY +++ G ++ + ++ EM
Sbjct: 583 TFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREM 642
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ K P V+Y + LF R A + EMI+ G Y +++ L R
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE 214
+EA+ +F K+ V+ N +I
Sbjct: 703 DEAIILFQKLGTMNVKFSITILNTMIN 729
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 206/482 (42%), Gaps = 36/482 (7%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+ ++ K +YST S + + + + Y++N ++ + + + + G
Sbjct: 99 LGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGI 158
Query: 63 NHDRFTYTTMLD---IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
D T+ T+++ I GE K + F M +G D ++Y++V++ L +G+
Sbjct: 159 QPDAITFNTLINGRCIEGEIKEAVGL---FNEMVRRGHQPDVISYSTVINGLCKSGNTSM 215
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + +M+ K C P +V+YT + L + V +A D+ EM+ RG+PP+ TY+ ++
Sbjct: 216 ALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILH 275
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENR 236
G EA +F++M V P+ IL++ CK G E R + +
Sbjct: 276 GFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEP 335
Query: 237 LALRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
A Y + DE +L V +P S N
Sbjct: 336 NAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYN------------------- 376
Query: 296 LVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
+LI K++ L SLL + +K + D+ ST+++ C R AL F+
Sbjct: 377 -ILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCS 435
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
L + Y L+ L K + ++++ M ++ + L +LI + A +
Sbjct: 436 SGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEV 495
Query: 414 AAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
A ++FS L D Q TYT +I G +D+A ++++ M G P+ ++NV++
Sbjct: 496 AKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQ 555
Query: 472 GL 473
G
Sbjct: 556 GF 557
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 98/184 (53%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY+T++ + R +F+ M G+ D +TY++++ L G +D A+ +
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLL 465
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M+ + P IV Y ++ +F+ +++ A +++ ++ G+ P TYT++++ L++
Sbjct: 466 KSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKE 525
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G +EA E+F KM++ G P+ + N++I+ + ++ T I ++ M R + F
Sbjct: 526 GLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTF 585
Query: 245 KEAL 248
+ L
Sbjct: 586 QMLL 589
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +++ + + +R+ K + M EK + D VTY+++M L G A+N+++EM
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM 433
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P +++Y+ + L + + EA + K M + + P+ Y +L+E + AGK
Sbjct: 434 CSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKL 493
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
E A E+FSK+ G+QP I+I+ K G + + R M+++ +
Sbjct: 494 EVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVI 553
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+Q F ++ + + + F +D+ + +
Sbjct: 554 IQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQML 588
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 173/436 (39%), Gaps = 54/436 (12%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ L + K+ S++ + M G+ + + +++ L V A+++ +M
Sbjct: 95 FGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMF 154
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +++ + + +KEA ++ EM++RG P+ +Y+ ++ L ++G
Sbjct: 155 KLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTS 214
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
AL++ KM+E G +P+ A +I+ C K+ L
Sbjct: 215 MALQLLRKMEEKGCKPNLVAYTTIIDSLC---------------------------KDTL 247
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
V D D L V P+ ++ +T + G S+ L
Sbjct: 248 ----VNDAMDLLSEMVDRGIPPDVVT-------YSTILHGFCSLGH-----------LNE 285
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
L + ++ +++ ++ + +++ C A FE K Y AL+
Sbjct: 286 ATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMD 345
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC- 427
N + ++++ M G + V+ +LI+ RR A + + E +
Sbjct: 346 GYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTP 405
Query: 428 -TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
T TY+ L+ G +AL ++K MC G+ P L T++ LL GL K G + +A
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEA---L 462
Query: 487 KEKKSIQADALSKDAV 502
K KS+Q + D V
Sbjct: 463 KLLKSMQESKIEPDIV 478
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 208/470 (44%), Gaps = 29/470 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ K++ F+ + G D FT+TT ++ F + R+ +F M+ G+ + VTY
Sbjct: 237 LHKSYEVFDLACQ--GVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYN 294
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+V+ L +G + A+ + M + P++V+Y + L + +EA +V EM
Sbjct: 295 NVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSM 354
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN + L++ R G EAL + +M G++P+ N L++ C++ +
Sbjct: 355 GFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQA 414
Query: 226 ILILRYMKENRLALRYPV-------------FKEALQTF-KVADEN----DSLLWQVHPQ 267
+L Y+ + L++ V F AL+ K+ N DSLL +
Sbjct: 415 EQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVG 474
Query: 268 FSPEFISDNDAVE--FVTTDIEGPLS---IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ ++A+E F ++G + L+ L ++ N+ + +L +++K +
Sbjct: 475 LC-KCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLL 533
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
LD +T+I C + + A E V+ + + Y L+ L + V +
Sbjct: 534 LDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRL 593
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFS 440
+ E + G VY ALL+ A R A K F L + + + Y LI Y
Sbjct: 594 LHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCR 653
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK 489
G+ +A K+ M +GI P+ T++ L+ G+ +GRV +A EI+ + +
Sbjct: 654 IGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMR 703
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 2/209 (0%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSR--GFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D+YT N ++K M K + ++ GF + +TY +L+ + +A RI F
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFF 629
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
+ + + + + +V Y ++ G+V A + + MK + PT +Y++ + +
Sbjct: 630 KNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCI 689
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
RV EA ++++EM GL PN + YT L+ + G+ + I +M G++P+K
Sbjct: 690 GRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITY 749
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLA 238
I+I+ CK G + +L M N +A
Sbjct: 750 TIMIDGYCKLGNMKEARELLNEMIRNGIA 778
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 81 RISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
RI ++ F+L M+ +GI TY+S++H + G VD A I+EEM+ + P +
Sbjct: 653 RIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVF 712
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
YTA + ++ + EM G+ PN TYT++++ + G +EA E+ ++M
Sbjct: 713 CYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEM 772
Query: 198 QEAGVQPDKAACNILIEKCCKAGE 221
G+ PD N L + CK E
Sbjct: 773 IRNGIAPDTVTYNALQKGYCKERE 796
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D +TY ++ + +I + + +E G + TY ++ A ++ AV
Sbjct: 567 FQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAV 626
Query: 122 NIWEEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
++ + ++ + V Y AY +I V EA + M RG+ P C TY+ L
Sbjct: 627 KFFKNLDYEKVELSSVVYNILIAAYCRI----GNVTEAFKLRDAMKSRGILPTCATYSSL 682
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ + G+ +EA EIF +M+ G+ P+ LI CK G+ + IL M N
Sbjct: 683 IHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSN 740
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 100/482 (20%), Positives = 176/482 (36%), Gaps = 86/482 (17%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + T+ T+L F + ++ + V + G++++ + V+H L
Sbjct: 389 KGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVS 448
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV-YKEMIQRGLPPNCYTYTVLM 178
A+ I ++ + T + L + EA ++ +K +GL N T L+
Sbjct: 449 ALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALL 508
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L G EE E+ +M E G+ D+ + N LI CCK G+
Sbjct: 509 HGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIE--------------- 553
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ FK+ +E V +F P+ + N F+ + ID
Sbjct: 554 ----------EAFKLKEE------MVQQEFQPDTYTYN----FLMKGLADMGKIDD---- 589
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ LL + + + ++E C R + A+ F+ + L
Sbjct: 590 ----------VHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVEL 639
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y LI ++ + ++ + M G + LIH + R A +IF
Sbjct: 640 SSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIF 699
Query: 419 ------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
LLP YTALIG + G D I M GI P+ T+ +++ G
Sbjct: 700 EEMRNEGLLPN----VFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDG 755
Query: 473 LEKLGRVSDA-----------------------EIYRKEKK---SIQADALSKDAVPMEE 506
KLG + +A + Y KE++ ++Q+D S +P+EE
Sbjct: 756 YCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEE 815
Query: 507 KI 508
+I
Sbjct: 816 EI 817
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG TY++++ R+ K +FE M+ +G+ + YT+++ G +
Sbjct: 668 KSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQM 727
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D +I EM P ++YT + +KEA ++ EMI+ G+ P+ TY L
Sbjct: 728 DIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNAL 787
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 184/433 (42%), Gaps = 27/433 (6%)
Query: 65 DRFTYTTML-DIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVN 122
D +Y T++ + G+++ ++ V + +E G + D V++ +V+H G+V A N
Sbjct: 194 DAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 253
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++ EM K P + +Y + + L + +A V ++M+ +G+ P+ TY ++
Sbjct: 254 LFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYS 313
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---L 239
+G ++E+ ++F KM G+ PD + + CK G ++ I +YM +
Sbjct: 314 CSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIV 373
Query: 240 RYPVFKEALQT-FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y + T + AD N+ H +S+ + + + +D+ ++
Sbjct: 374 SYSILLHGYATEGRFADMNNLF----HSMADKGIVSNCHCINILISAHAKRGMMDEAML- 428
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ + + + ++ + ST+I C R A+ F + + +
Sbjct: 429 -------------VFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEP 475
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKI 417
Y +LI K E + EM G H + + +IH L R + A +
Sbjct: 476 NTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDV 535
Query: 418 FSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F+L+ D+ T+ +LI Y G +KA + M GI P + T N L++G K
Sbjct: 536 FNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCK 595
Query: 476 LGRVSDAEIYRKE 488
G++ D I +E
Sbjct: 596 SGKIDDGLILFRE 608
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 182/443 (41%), Gaps = 57/443 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA FN + + +G D TY +++D +A+ + ++V M +KG+ D VTY
Sbjct: 248 VSKACNLFNEMVQ-KGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYN 306
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H S +G + ++ +M K P V+++++M L + R K+A ++++ M +
Sbjct: 307 AIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTK 366
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ +Y++L+ G++ + +F M + G+ + NILI K G
Sbjct: 367 GHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEA 426
Query: 226 ILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+L+ M+ + + + F ++AD + +FS +
Sbjct: 427 MLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAME--------KFS----------QM 468
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV-ISTIIEVNCDHRR 340
++ IE ++ L+ +LV +S +M K + + V S+II C R
Sbjct: 469 ISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGR 528
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
A F + + + +LI + K +++ M G
Sbjct: 529 VMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG---------- 578
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
+ P+ T L+ Y +G D L +++ M K +
Sbjct: 579 -------------------IEPD----VVTNNTLVSGYCKSGKIDDGLILFREMLHKKVK 615
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P+ T+N++L GL + GR S A+
Sbjct: 616 PTTVTYNIVLDGLLRAGRTSAAK 638
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +LD A R S+ K +F M + G +D TY ++ L D A+ ++ ++
Sbjct: 620 TYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 679
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+C I + L+ R +EA D++ + GL PN TY V++ L++ G
Sbjct: 680 GAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSV 739
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
EEA +FS M+++G P N +I + G+
Sbjct: 740 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGD 773
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 40/276 (14%)
Query: 29 IKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
I + + +N ++ H M++A L F + + +G + TY+T++ F R++
Sbjct: 403 IVSNCHCINILISAHAKRGMMDEAMLVFTEM-QGQGVRPNVVTYSTLISAFCRMGRLADA 461
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY------------ 133
F M GI + Y S++H GD+ A EM K +
Sbjct: 462 MEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIH 521
Query: 134 ------------------------PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
PTIV++ + + L ++++A V M+ G+ P
Sbjct: 522 SLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 581
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ T L+ ++GK ++ L +F +M V+P NI+++ +AG T +
Sbjct: 582 DVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMF 641
Query: 230 RYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
M ++ A+ +K L+ D D + H
Sbjct: 642 HEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFH 677
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++D + ++ V + M GI D VT +++ +G +D + ++ EM
Sbjct: 550 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREM 609
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K+ PT V+Y + L R A ++ EMI G + TY +L++ L R
Sbjct: 610 LHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLT 669
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE 214
+EA+ +F K+ + D N +I
Sbjct: 670 DEAITLFHKLGAMDCKFDITILNTMIN 696
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 141/350 (40%), Gaps = 28/350 (8%)
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+E R P TY +LM+ RA + + +++ AG++ ++ C A
Sbjct: 113 EEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHA 172
Query: 220 GET-RTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ---FSPEF 272
T + ++L M E A+ Y ++L + E ++ ++ + SP+
Sbjct: 173 KRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDV 232
Query: 273 ISDNDAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
+S N + E V + + +V L K + + + +L
Sbjct: 233 VSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQ 292
Query: 316 IMDKSIQLDSAVISTIIE-VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++DK ++ D + II +C ++ A + F L + + + + L K
Sbjct: 293 MVDKGVEPDGVTYNAIIHGYSCSGHWKESAKM-FRKMTSKGLIPDTVTFSSFMSSLCKHG 351
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATY--T 432
EI + MT GH + ++L+H + R +F + + + +
Sbjct: 352 RSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCIN 411
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
LI + G D+A+ ++ M +G+ P++ T++ L++ ++GR++DA
Sbjct: 412 ILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADA 461
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 180/439 (41%), Gaps = 61/439 (13%)
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+L + + R + ++E M G++ +T+ +++ GD+ A +++EM++
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K PT++ YT ++ L +++++EA +++ M + G+ PN YTY LM+ + ++
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
AL ++ M G+ PD ILI+ CK GE + + M + + V+ +
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330
Query: 250 TF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+ KV D + + + L L ++ V+
Sbjct: 331 AYCKVGD------------------------------------VSEAMALFLELERFEVS 354
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
D I+ + + C R + A FE K + Y +LI
Sbjct: 355 PDVFTYSILIRGL--------------CSVSRTEEAGNIFEKMTKEGILANSVTYNSLID 400
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLP 422
K K EI +MT+ G V + LI R A I+ SL P
Sbjct: 401 GCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSP 460
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ TYTA+I + GS +ALK+Y M GI P+ T + LL GL K G++SDA
Sbjct: 461 D----VVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDA 516
Query: 483 EIYRKEKKSIQADALSKDA 501
EK Q + DA
Sbjct: 517 LELFTEKIEFQTPRCNVDA 535
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY+ ++ R +FE M ++GI ++VTY S++ G +D A+ I
Sbjct: 356 DVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEIC 415
Query: 125 EEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+M P +++++ Y KI ++ A +Y EM+ + L P+ TYT +++
Sbjct: 416 SQMTENGVEPNVITFSTLIDGYCKI----RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ G +EAL+++S M + G+ P+ + L++ CK G+
Sbjct: 472 HCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGK 512
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + +TY T++D + + +++ M +G+ D VT+ ++ L G++
Sbjct: 244 REVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A N++ M P I Y + + V EA ++ E+ + + P+ +TY++L
Sbjct: 304 KAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSIL 363
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ L + EEA IF KM + G+ + N LI+ CCK G+ + I M EN
Sbjct: 364 IRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTEN 421
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 83/160 (51%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G D T+ ++D + + + + +F M + + + Y S++ GDV
Sbjct: 280 GEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVS 339
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++ E++ E P + +Y+ ++ L R +EA +++++M + G+ N TY L+
Sbjct: 340 EAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLI 399
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + GK ++ALEI S+M E GV+P+ + LI+ CK
Sbjct: 400 DGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCK 439
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 163/416 (39%), Gaps = 34/416 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G YT ++ +I + + M+E G+ + TY ++M +
Sbjct: 209 RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANA 268
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ ++++M + P +V++ + L +K A +++ MI+ + PN Y L
Sbjct: 269 KQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL 328
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ + G EA+ +F +++ V PD +ILI C T I M + +
Sbjct: 329 IDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGI 388
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ + + D L ++ Q + + N + F +T I+G I
Sbjct: 389 LANSVTYNSLIDGCCKEGKMDKAL-EICSQMTENGVEPN-VITF-STLIDGYCKI----- 440
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+NL A + S ++ KS+ D + +I+ +C + AL YS +D
Sbjct: 441 ------RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKL--YSDMLDNG 492
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ Y + +L L K+++ +E T+ + R V A
Sbjct: 493 ITPNCY-TISCLLDGLCKDGKISDALELFTEK-------------IEFQTPRCNVDAGGS 538
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
L YTALI G KA+K++ M R G+ P + V+L GL
Sbjct: 539 KPSLTNH----VAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 203/478 (42%), Gaps = 53/478 (11%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEK--- 95
LK P + AW FF + S GF H+ TY ++ + + ++ + E++ K
Sbjct: 73 LKNEPNL--AWSFFTQLKES-GFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESV 129
Query: 96 -GINIDAV-------------TYTSVMHWLSN--------AGDVDGAVNIWEEMKLKECY 133
G +I A+ ++SV+ + + G D A++ + K +
Sbjct: 130 LGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFV 189
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P I+S M L + ++ A +Y+ + + GL PN YTY + ++ L R G +EEA+++
Sbjct: 190 PHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDV 249
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-- 251
F +M+EAGV P+ C+ IE C + LR ++ + + ++ F
Sbjct: 250 FREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCS 309
Query: 252 --KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
K+ + D + V+ +P+ I L+ K NL+
Sbjct: 310 EMKLKEAEDVFIDMVNEGIAPDGY------------------IYGALIHAYCKAGNLLQA 351
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+L + ++ I+ + ++S+I++ C+ + F+ + L+ Y ++
Sbjct: 352 VALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDA 411
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKC 427
L KL + E++ EM SL V LI + V A +F + E +
Sbjct: 412 LCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPD 471
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
TY L+G + G +AL++ + +G+ P+ T N ++ GL G+V +AE +
Sbjct: 472 IVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAF 529
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 188/449 (41%), Gaps = 51/449 (11%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + +++L E S + F+ ++ GI +D V Y V+ L G V+
Sbjct: 360 SNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 419
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV + EMK + +V YT + L ++ +A ++++EM +RG+ P+ TY +L+
Sbjct: 420 EAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 479
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
R G +EALE+ + G++P+ A N +IE C AG+ + L + E++
Sbjct: 480 GGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL-EDKCL 538
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT-DIEGPLSIDQGLV 297
Y + + L ++ Q + + +++ +EG D+ L+
Sbjct: 539 ENYSAMVDGYCKANFTRKAYELFSRLSKQ--GILVKKKSCFKLLSSLCMEG--EYDKALI 594
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG----ALLAFEYSVK 353
L+ + ++A+D ++ + + +I C RDG A L F+ V+
Sbjct: 595 LL----ERMLALD----------VEPNQIMYGKLIGAFC----RDGDMKRAQLVFDMLVE 636
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA--------------GHS-LGVYLG 398
+ + Y +I ++N + +I +M + GHS + + +
Sbjct: 637 RGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMA 696
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALKIYKT 453
L GS + A+ +S + E D C YT LI + + A+ +Y
Sbjct: 697 RSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVC---YTVLIDSHCKTNNLQDAINLYDE 753
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M +G+ P + T+ LL+ G + A
Sbjct: 754 MIARGLQPDIVTYTALLSSCCSRGDMDRA 782
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A L F+ + RG D TYT M++ + + + +F M+E+GI D +TYT
Sbjct: 624 MKRAQLVFDMLV-ERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 682
Query: 106 SVMHWLSNAG---------------DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
V+ S + A W EMK P +V YT + +
Sbjct: 683 VVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTN 742
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+++A ++Y EMI RGL P+ TYT L+ G + A+ + ++M G++PD A +
Sbjct: 743 NLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMS 802
Query: 211 IL 212
+L
Sbjct: 803 VL 804
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 190/479 (39%), Gaps = 40/479 (8%)
Query: 21 QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHDRFTYTTMLDIFGE 78
D++ N IK + V+ +L+ M A + R G D Y ++D +
Sbjct: 356 NDMVSN-GIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCK 414
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
++ + M+ + +++D V YT+++ G + A N++EEMK + P IV+
Sbjct: 415 LGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVT 474
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y + N KEA ++ + +GL PN T+ ++E L AGK +EA + ++
Sbjct: 475 YNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE 534
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTII-LILRYMKENRLALRYPVFKEALQTFKVADEN 257
+ ++ A +++ CKA TR L R K+ L + FK L + + E
Sbjct: 535 DKCLENYSA----MVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFK-LLSSLCMEGEY 589
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
D L + + D + + + + G D + K+ + D L+ +
Sbjct: 590 DKALILLERMLAL----DVEPNQIMYGKLIGAFCRDGDM------KRAQLVFDMLVERGI 639
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN--- 374
+ + +I+ VNC RD E +K D+ Y ++ K+N
Sbjct: 640 TPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDV----ITYTVVLDGHSKVNLKM 695
Query: 375 ----TFPKVAE--------IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
F K +E EM + G V +LI A ++ +
Sbjct: 696 ARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMI 755
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
Q TYTAL+ S G D+A+ + M KGI P +VL G+ K +V
Sbjct: 756 ARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKV 814
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 160/403 (39%), Gaps = 16/403 (3%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
++ RGF + +++ E +I ++ ++ G+N + TY + L G+
Sbjct: 183 TKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGN 242
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ AV+++ EM+ P V+ + Y++ L + R + + + P + + YT
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTA 302
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
++ K +EA ++F M G+ PD LI CKAG + + M N
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ + LQ + +V QF EF ++ V +I +
Sbjct: 363 IKTNCVIVSSILQCLCEM----GMASEVVDQFK-EFRDSGIFLDEVLYNI---------V 408
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
V L K + LL+ + + + LD +T+I C + A FE + +
Sbjct: 409 VDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGI 468
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y L+G + + E+++ + G +I L A + V A+
Sbjct: 469 EPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGK-VKEAE 527
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
F ED KC Y+A++ Y A KA +++ + ++GI
Sbjct: 528 AFLNTLED-KCLENYSAMVDGYCKANFTRKAYELFSRLSKQGI 569
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEA--KRISSMKY-------------VFELMQEKGINIDAV 102
+ RG D TYT +LD + K S+++ + M+E GI D V
Sbjct: 670 KERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVV 729
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
YT ++ ++ A+N+++EM + P IV+YTA + + A + EM
Sbjct: 730 CYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEM 789
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYE 188
+G+ P+ +VL +++A K +
Sbjct: 790 SFKGIEPDSRAMSVLHRGILKARKVQ 815
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 157/352 (44%), Gaps = 31/352 (8%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D YTT++ FG++ +S +F+ M+ K I D VTYTS++H L AG V A ++
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM K P V+YTA + +KEA ++ +M+++GL PN TYT L++ L +
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP-- 242
G+ + A E+ +M E G+QP+ N LI CK G + + M+E LA +P
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV---KLMEEMDLAGFFPDT 532
Query: 243 -----VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ + ++A ++ L + P ++ N + + G L + L+
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC--MSGMLEDGERLI 590
Query: 298 LILLKK-------------------KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+L K N+ A + G+ + + D+ + +I+ +C
Sbjct: 591 KWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
R A + V+ +L +Y +LI K F + ++ EEM G
Sbjct: 651 RNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 161/402 (40%), Gaps = 59/402 (14%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF E G+ + V+Y ++H L G V A ++ +M+ + P +VSY+ +
Sbjct: 239 VFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+++ + + +E+ ++GL PN YTY ++ +L + G+ EA ++ M+ + PD
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
LI K+G +++ Y +F E + +
Sbjct: 359 VYTTLISGFGKSGN---------------VSVEYKLFDEMKRK----------------K 387
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
P+F++ T+ I G L + +V L S ++ K ++ D
Sbjct: 388 IVPDFVT-------YTSMIHG-----------LCQAGKVVEARKLFSEMLSKGLKPDEVT 429
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I+ C A V+ L Y AL+ L K E++ EM+
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSA 441
+ G V LI+ L A K+ P+ T TYT ++ Y
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPD----TITYTTIMDAYCKM 545
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G KA ++ + M KG+ P++ TFNVL+ G G + D E
Sbjct: 546 GEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE 587
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 96/180 (53%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G +++TY +++ + R+ + V +M+ + I D V YT+++ +G+V
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+++EMK K+ P V+YT+ + L +V EA ++ EM+ +GL P+ TYT L
Sbjct: 374 SVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTAL 433
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +AG+ +EA + ++M E G+ P+ L++ CK GE +L M E L
Sbjct: 434 IDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 188/453 (41%), Gaps = 54/453 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +Y+ ++D + + +++ + + E +Q KG+ + TY S++ +L G V
Sbjct: 281 RGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVE 340
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + MK + +P V YT + + V ++ EM ++ + P+ TYT ++
Sbjct: 341 AEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIH 400
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
L +AGK EA ++FS+M G++PD+ LI+ CKAGE + + M E L
Sbjct: 401 GLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460
Query: 239 --LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDN-------------DAVEFV 282
+ Y + L D + LL ++ + P + N AV+ +
Sbjct: 461 NVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLM 520
Query: 283 -TTDIEG--PLSIDQGLVL-ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
D+ G P +I ++ K + LL ++DK +Q + ++ C
Sbjct: 521 EEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC-- 578
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
G L E +K L+ GI+ TF + + ++ +Y G
Sbjct: 579 --MSGMLEDGERLIKWMLDK---------GIMPNATTFNSLMKQYCIRNNMRATIEIYKG 627
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+H G ++P+ T TY LI + A + +A ++K M KG
Sbjct: 628 ---MHAQG-------------VVPD----TNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ ++N L+ G K + +A +E ++
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRT 700
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 139/342 (40%), Gaps = 35/342 (10%)
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYM 232
+ V + LV AG EA ++F K+ GV +CN+ + + + + RT + R
Sbjct: 184 FDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREY 243
Query: 233 KENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
E + + Y + L E SLL Q+ EF + V + ++G
Sbjct: 244 SEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQM------EFRGNVPDVVSYSVIVDGY 297
Query: 290 LSIDQ-GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
++Q G VL L+++ + K ++ + ++II C R A
Sbjct: 298 CQVEQLGKVLKLMEE------------LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVL 345
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ + Y LI K ++ +EM + +IH L A
Sbjct: 346 RVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQA 405
Query: 409 RRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
+ V A K+FS L P++ TYTALI Y AG +A ++ M KG+ P+
Sbjct: 406 GKVVEARKLFSEMLSKGLKPDE----VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPN 461
Query: 463 LGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
+ T+ L+ GL K G V A ++ +K +Q + + +A+
Sbjct: 462 VVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 75/155 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G T+ +++ F + + + + + M +KGI +A T+ S+M ++
Sbjct: 561 KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRA 620
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ I++ M + P +Y +K +KEA ++KEM+++G +Y L++
Sbjct: 621 TIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIK 680
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ K+EEA ++F +M+ G +K +I ++
Sbjct: 681 GFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVD 715
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/541 (21%), Positives = 222/541 (41%), Gaps = 98/541 (18%)
Query: 24 LKNLPIKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+K + D YT N ++ + ++A F+ + ++ GF D+ T+ ++LD++G+A+
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEM-KASGFEPDKVTFNSLLDVYGKAR 292
Query: 81 R--------------------------ISS------MKYVFELMQE---KGINIDAVTYT 105
R ISS ++ L QE KGI D VTYT
Sbjct: 293 RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYT 352
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL------------------- 146
+++ L AG +D A+ ++EM C P + +Y A +K+
Sbjct: 353 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSA 412
Query: 147 -FLNDRV---------------KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
F+ D V E + V+KEM + G P TY L+ R G ++ A
Sbjct: 413 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 472
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++I+ +M EAG+ PD + N ++ + G + M+E + L
Sbjct: 473 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
+ A D + + +SD + + IE + + LVL+ K NL +
Sbjct: 533 YANAKRLDKM----------KALSD----DIYSERIEPHNWLVKTLVLVNSKVNNLAEAE 578
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+ K LD V++ ++ + +R + +NL Y +L+ +
Sbjct: 579 KAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMY 638
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA- 429
+L K I+ E+ +G Y +I+ G + A+++FS + KC+
Sbjct: 639 SRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFS----EMKCSGL 694
Query: 430 -----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY + Y S ++A+++ + M +G P+ T+N ++ G + G+++DA+I
Sbjct: 695 KPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKI 754
Query: 485 Y 485
+
Sbjct: 755 F 755
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 167/394 (42%), Gaps = 44/394 (11%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME-YLVRAGKYEEALE 192
P +YTA + R ++A V++ M+ G+ P TY V++ Y A ++E +E
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+ + M+E GV PD+ N LI C + + + MK + F L +
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 253 VADENDSLLWQVHPQ----FSPEFISDNDAVEFVTTD--IEGPLSIDQGLVLILLKKKNL 306
A +D + + P ++ N + D +E +++ Q + + + K ++
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGI-KPDV 348
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
V +L+SG +D++ ++D+A+ V D R+G K +L Y AL
Sbjct: 349 VTYTTLISG-LDRAGKIDAAI------VEYDEMVRNGC--------KPNL----CTYNAL 389
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SL 420
I + FP++ + +E+ AG + L+ G + +F
Sbjct: 390 IKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 449
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+PE TY +LI Y G D A++IYK M GI+P + T+N +L+ L + GR
Sbjct: 450 IPERD----TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 505
Query: 481 DAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
AE + A+ +D P E LL+
Sbjct: 506 QAE-------KLFAEMEERDCKPDEYSYSSLLHA 532
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 192/490 (39%), Gaps = 58/490 (11%)
Query: 35 TVNQVLKTHPPMEKAW---LFFNWVSRSRGFNHDRFTYTT-------------------- 71
T N VL + M W + + G DR+TY T
Sbjct: 209 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 268
Query: 72 ---------------MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+LD++G+A+R V + M+ G VTY S++ G
Sbjct: 269 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGL 328
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ AV + +EM++K P +V+YT + L ++ A Y EM++ G PN TY
Sbjct: 329 LEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNA 388
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ GK+ E + +F +++ AG PD N L+ + G + + + MK+
Sbjct: 389 LIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAG 448
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ + ++ D L Q++ + + I +S +
Sbjct: 449 YIPERDTYVSLISSYSRCGLFD-LAMQIYKR-------------MMEAGIYPDVSTYNAV 494
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD--GALLAFEYSVKM 354
+ L + + L + + ++ + D S+++ + +R D AL YS ++
Sbjct: 495 LSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERI 554
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + L L+ K+N + + E+ + SL + + ++ G R
Sbjct: 555 EPHNWLVKTLVLVN--SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKV 612
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
KI SL+ E ATY +L+ +Y G +K I + G+ P ++N ++
Sbjct: 613 EKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYA 672
Query: 473 LEKLGRVSDA 482
+ G++ +A
Sbjct: 673 YGRKGQMKEA 682
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 108/294 (36%), Gaps = 58/294 (19%)
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ RAG+ EA S + +A PD A L+ +AG R + + R M ++ +
Sbjct: 151 MARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGV--- 203
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ A+ T+ V V +S + + VE V + E ++ D+ L
Sbjct: 204 ----QPAIVTYNV----------VLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTL 249
Query: 301 LKKKNLVAIDSLLSGIMDK----SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ A+ + + D+ + D +++++V RR D A+ + ++
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y +LI +K + + +EM G
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG-------------------------- 343
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+ P+ TYT LI AG D A+ Y M R G P+L T+N L+
Sbjct: 344 ---IKPD----VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALI 390
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 193/445 (43%), Gaps = 53/445 (11%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
AW FF+ + +++G D +YT+M+ + +A R+ + +F M+ + A Y +++
Sbjct: 2 AWKFFHEL-KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+AG + A + E ++ + C P++VS+ + + L +V EA ++ E++++
Sbjct: 61 MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 119
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN TY ++++ L G+ EEA I +M+ A + P+ NI++++ CKA
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA--------- 170
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
+L Y +F+ A Q +P D V + +
Sbjct: 171 ------RKLEEAYKIFESASQR------------GCNP----------DCVTYCS----- 197
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
L+ L KK + L ++D + V +++I H R++ F
Sbjct: 198 -------LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIF 250
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ ++ + T + + K K I E++ G V ++LIH L A
Sbjct: 251 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKA 310
Query: 409 RRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ + IF + + Y A++ + +G KA +I + M K + P++ T+
Sbjct: 311 GQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATY 370
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKS 491
++ GL K+ R+ +A + +E KS
Sbjct: 371 GAIVDGLAKIDRLDEAYMLFEEAKS 395
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 186/458 (40%), Gaps = 45/458 (9%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V + + ME A LF N + T M+D +A+++ +FE ++
Sbjct: 138 VEEAYRILDEMEHASLFPNLL-----------TVNIMVDRLCKARKLEEAYKIFESASQR 186
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G N D VTY S++ L G VD A ++E+M V YT+ ++ F++ R ++
Sbjct: 187 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 246
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
++KE+I+RG P+ M+ + +AG+ E+ IF ++ G PD + +ILI
Sbjct: 247 HKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 306
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
KAG+ R I MK+ AL + + F + +VH +
Sbjct: 307 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG-------KVHKAY------- 352
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM------DKSIQLDSAVIS 329
+ +E + P G ++ L ID L M K I+L+ + S
Sbjct: 353 -EILEEMKEKCVQPTVATYGAIV-----DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 406
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++I+ R D A L E +K L + +L+ L+K + + M +
Sbjct: 407 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 466
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK-----CTATYTALIGVYFSAGSA 444
Y ++LI+ L ++ K F + QK TYT +I G+
Sbjct: 467 KCPPNTYTYSILINGLCRVQK---YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 523
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A +++ G P +FN L+ G+ R +A
Sbjct: 524 TDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 172/434 (39%), Gaps = 25/434 (5%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ Y TM+ +G A R + E ++E+G V++ S++ L VD A++++E
Sbjct: 54 YAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV 113
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK K+ P +Y + +L L RV+EA + EM L PN T ++++ L +A K
Sbjct: 114 MK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 172
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEA +IF + G PD LI+ K G+ + M + V+
Sbjct: 173 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 232
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
++ F + + H F E + + L++ + + K +
Sbjct: 233 LIRNFFIHGRKED----GHKIFK----------ELIRRGCKPDLTLLNTYMDCVFKAGEV 278
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+ I D S +I + F + L+ AY A+
Sbjct: 279 EKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAV 338
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
+ K K EI+EEM + V ++ L R A +F E+ K
Sbjct: 339 VDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLF----EEAK 394
Query: 427 CTAT------YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
Y++LI + G D+A I + M +KG+ P++ T+N LL L K ++
Sbjct: 395 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 454
Query: 481 DAEIYRKEKKSIQA 494
+A + + K ++
Sbjct: 455 EALVCFQSMKEMKC 468
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/486 (21%), Positives = 191/486 (39%), Gaps = 64/486 (13%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINI 99
+ H P E A FF + R+ G D +L F EAKR ++ + E G
Sbjct: 127 RAHRP-ELALAFFGQLLRT-GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVP 184
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATD 157
D +Y+ ++ L + G A ++ M C P +V+YT + F V +A D
Sbjct: 185 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACD 244
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRA--------------------------------- 184
++KEM+QRG+PP+ TY+ ++ L +A
Sbjct: 245 LFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 304
Query: 185 --GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLAL 239
G+++EA+ +F +M+ + PD N+L+ CK G E R + + +N
Sbjct: 305 STGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 364
Query: 240 RYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y + T + D D + +P+ + + +D+ ++
Sbjct: 365 SYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT----FSVLIKAYANCGMLDKAMI- 419
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ + + D ++ D +T+I C + D A+ F + +
Sbjct: 420 -------------IFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 466
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
++ AY LI + K E++ E+ G L + + +I+ L R + A IF
Sbjct: 467 DKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF 526
Query: 419 SLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
L Y+ L+ Y G +KAL+++ M GI P++ + L+ G K+
Sbjct: 527 DLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKI 586
Query: 477 GRVSDA 482
GR+ +
Sbjct: 587 GRIDEG 592
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 168/429 (39%), Gaps = 47/429 (10%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++++ +A+ + + M KG+ D TY ++++ S+ G
Sbjct: 252 RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 311
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +++EM+ P +V+ M L ++KEA DV+ M +G P+ ++Y +++
Sbjct: 312 AVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLN 371
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G + ++F M G+ PD ++LI+ G ++I M+++ +
Sbjct: 372 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKP 431
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + D + + + D A + I+G +
Sbjct: 432 DVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL---IQGFCTHGS----- 483
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
LLK K L+ IM+ ++LD S+II C R A F+ +V + + +
Sbjct: 484 LLKAKELIL------EIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPD 537
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y L+ + K + + M AG V
Sbjct: 538 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV------------------------ 573
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
Y L+ Y G D+ L +++ M +KGI PS +N+++ GL GR
Sbjct: 574 ---------VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRT 624
Query: 480 SDAEIYRKE 488
A++ E
Sbjct: 625 VPAKVKFHE 633
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 201/482 (41%), Gaps = 27/482 (5%)
Query: 12 LKYSTWDSAQDLLK-----NLPIKWDSYT-VNQVLKTHPPMEKAWLFFNWVSRSRGFNHD 65
K + A DL K +P +Y+ V L M KA F + ++G D
Sbjct: 234 FKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMV-NKGVLPD 292
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
+TY ++ + + VF+ M+ I D VT +M L G + A ++++
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
M +K P + SY + + + TD++ M+ G+ P+ YT++VL++ G
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
++A+ IF++M++ GV+PD +I C+ G+ + M + +A +
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+Q F + SLL + E I +E + + + ++ L K
Sbjct: 473 CLIQGFCT---HGSLLK------AKELI-----LEIMNNGMRLDIVFFSSIINNLCKLGR 518
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
++ ++ ++ D+ V S +++ C + + AL F+ V + Y
Sbjct: 519 IMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGT 578
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
L+ K+ + + EM + G L ++I L A R VPA F + E
Sbjct: 579 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESG 638
Query: 425 ---QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
KC TY ++ +F D+A+ ++K + + + T N ++AG+ + RV +
Sbjct: 639 IAINKC--TYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 696
Query: 482 AE 483
A+
Sbjct: 697 AK 698
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 141/345 (40%), Gaps = 28/345 (8%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P +TY +LM+ RA + E AL F ++ G++ D N L++ C+A T
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDS--------LLWQVHPQFSPEFISDN 276
+ IL + + L VF ++ + D+ S ++ + SP+ ++
Sbjct: 169 ALDILLH-RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYT 227
Query: 277 DAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ E V I L +V L K + + ++ L +++K
Sbjct: 228 TVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNK 287
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ D+ + +I + A+ F+ + + + L+G L K +
Sbjct: 288 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEA 347
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT--ALIGV 437
++ + M G + V+ ++++ + V +F L+ D YT LI
Sbjct: 348 RDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKA 407
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y + G DKA+ I+ M G+ P + T+ ++A L ++G++ DA
Sbjct: 408 YANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 37/213 (17%)
Query: 27 LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
L I + S +N + K M+ +F ++ + G + D Y+ ++D + ++
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIF--DLTVNVGQHPDAVVYSMLMDGYCLVGKMEKAL 558
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
VF+ M GI + V Y ++++ G +D ++++ EM K P+ + Y + L
Sbjct: 559 RVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR----------------------- 183
F+ R A + EM + G+ N TY +++ +
Sbjct: 619 FVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDI 678
Query: 184 -------AGKY-----EEALEIFSKMQEAGVQP 204
AG + EEA ++F+ + +G+ P
Sbjct: 679 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
YT +I +F G +KA ++K M ++GI P L T++ ++ L K + AE + ++
Sbjct: 225 AYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQ- 283
Query: 490 KSIQADALSKDAVPMEEKICDLLYG 514
++K +P +L+YG
Sbjct: 284 ------MVNKGVLPDNWTYNNLIYG 302
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 180/416 (43%), Gaps = 23/416 (5%)
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
E MQ GI+ + TY+ +++ + A+ + +M P IV+ + +
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+R+ +A + +M++ G P+ +T+ L+ L R + EA+ + +M G QPD
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 210 NILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQV-H 265
I++ CK G+ + +L+ M++ ++ + Y +AL +K ++ +L ++ +
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 266 PQFSPEFISDN-------------DAVEFVTTDIEGPLSID----QGLVLILLKKKNLVA 308
P ++ N DA ++ IE ++ + L+ +K+ LV
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ L ++ +SI D S++I C H R D A FE + D Y LI
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC- 427
K + E+ EM++ G LIH AR A +F + D
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 428 -TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY+ L+ + G + AL +++ + R + P + T+N+++ G+ K G+V D
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ + S ++ +K +E L+ + RS +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS--ID 358
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY+++++ F R+ K++FELM K + VTY +++ A VD + +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+YT + F A V+K+M+ G+ P+ TY++L++ L
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E AL +F +Q + ++PD NI+IE CKAG+
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 99/178 (55%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N + T++ ++D F + ++ + +++ M ++ I+ D TY+S+++ +D
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++E M K+C+P +V+Y +K RV E ++++EM QRGL N TYT L+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+A + + A +F +M GV PD +IL++ C G+ T +++ Y++ +++
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TYTT++ F +A+ + + VF+ M G+ D +TY+ ++ L N G V+
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++E ++ + P I +Y ++ + +V++ D++ + +G+ PN TYT +M
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
R G EEA +F +M+E G PD N LI + G+ ++R M+ R
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 602
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 90/167 (53%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++ F +AKR+ +F M ++G+ + VTYT+++H A + D A ++++M
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P I++Y+ + L N +V+ A V++ + + + P+ YTY +++E + +AGK
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
E+ ++F + GV+P+ ++ C+ G + R MKE
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 174/433 (40%), Gaps = 19/433 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D FT+ T++ R S + + M KG D VTY V++ L GD+D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ ++M+ + P +V Y + L V +A +++ EM +G+ PN TY L+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G++ +A + S M E + P+ + LI+ K G+ + M + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F + D D S + + + +D+G+ L
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 301 -LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ ++ LV ++ +T+I R D A + F+ V + +
Sbjct: 421 EMSQRGLVG---------------NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y L+ L + E + ++ +Y ++I + A + +F
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 420 LLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-AGLEKL 476
L + TYT ++ + G ++A +++ M +G P GT+N L+ A L
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 477 GRVSDAEIYRKEK 489
+ + AE+ R+ +
Sbjct: 586 DKAASAELIREMR 598
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 166/427 (38%), Gaps = 64/427 (14%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D AVN++ +M +P+IV ++ + + ++ + ++M G+ N YTY++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ R + AL + +KM + G +PD N L+ C + ++ M E
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 237 L--------ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
L + +F+ + VA + ++ P I N + DI+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK--RGDIDL 239
Query: 289 PLS---------IDQGLVL------ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
LS I+ G+V+ L KN+ +L + + +K I+ + +++I
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C++ R A ++ +N + ALI +K + ++ +EM K
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC-------------------------- 427
++ + LI+ R A +F L+ + C
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 428 ------------TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
T TYT LI +F A D A ++K M G+ P + T+++LL GL
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 476 LGRVSDA 482
G+V A
Sbjct: 479 NGKVETA 485
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY+ +LD ++ + VFE +Q + D TY ++ + AG V+
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +V+YT M +EA +++EM + G P+ TY L+
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G + E+ +M+ C G+ TI L+ + + RL
Sbjct: 579 RAHLRDGDKAASAELIREMRS----------------CRFVGDASTIGLVTNMLHDGRL 621
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 203/460 (44%), Gaps = 38/460 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++GF + +++ F +AK + S + E+M EKG + T+T ++ L A V
Sbjct: 225 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 284
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + E+M + C P +V+Y+ + L +V +A ++++ M +R PPN T+ +L+
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 344
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L +A + EEA +++ +M+E G PD N LI+ CK+ + + + + E+ ++
Sbjct: 345 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 404
Query: 239 LRYPV-----FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV-EFVTTDIEGPLSI 292
V F ++AD V FSP+ + + E+ T +
Sbjct: 405 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 464
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIM-----DKSIQL-----------DSAVISTIIEVNC 336
+ + + ++L G+ +++IQL D+ + + ++E
Sbjct: 465 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 524
Query: 337 DHRRRDGALLAFEYSV-KMD--LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
+ D AL E + K D N +A AL+ L ++ +++ +M++ G +
Sbjct: 525 RASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAA 584
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKA 447
V L+ L +R A ++F + PE +T +I SA D A
Sbjct: 585 AVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPE----ISTVNVVISWLCSAAKVDDA 640
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
++ + M + G P + T N L+ G K GR A++ RK
Sbjct: 641 YELVQRMSKLGCCPDIETCNTLIGGYCKSGR---ADLARK 677
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 187/440 (42%), Gaps = 21/440 (4%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E LFF+W +RSR H+ F+ LD+ R +F + + TY
Sbjct: 5 ELVLLFFDW-ARSR-VGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGI 62
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ S+AGD+D A+ + EEMK V +T MK L RV EA + ++ M +
Sbjct: 63 LIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKD 121
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
P+ TYT L+ L +AGK++EA + +M G PD + LI+ CK G
Sbjct: 122 CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAF 181
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
+L + + + F+ +Q ++ ++ +S+ + + + + A F T +
Sbjct: 182 RVLEDVIQRGMGNSDAAFETIIQ--RLCNKYNSV------ELASKVLGVVIAKGFTPTVL 233
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
L I+ K K+L + LL +++K + + +I C R A
Sbjct: 234 MFNLVING-----FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 288
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
E V + Y +I L K E+ + M + V +LI L
Sbjct: 289 LLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLC 348
Query: 407 SARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A+R A +++ + E C TY +LI + D+A ++++T+ G+ +
Sbjct: 349 KAKRIEEARQLYHRMRE-TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 407
Query: 464 G-TFNVLLAGLEKLGRVSDA 482
T++ L G LGR++DA
Sbjct: 408 AVTYSTLFHGYAALGRMADA 427
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 204/490 (41%), Gaps = 32/490 (6%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQV---LKTHPPMEKAWLFFNWVSRSRG 61
V+ + K +D AQ +L+ + + D+ T + + L E+A+ V +
Sbjct: 133 VHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 192
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
N D T + + + + V ++ KG + + V++ A D+D A
Sbjct: 193 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAY 252
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ E M K C P + ++T + L +RV EA + ++M+ G PN TY+ ++ L
Sbjct: 253 KLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGL 312
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA--- 238
+ G+ ++A E+F M+ P+ NILI+ CKA + M+E A
Sbjct: 313 CKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDI 372
Query: 239 LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ Y + L ++F+V DE L+Q P+ +S +AV + +T G ++ +
Sbjct: 373 ITYNSLIDGLCKSFQV-DEAFQ-LFQTIPESG---VSAANAVTY-STLFHGYAALGR--- 423
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ + S ++DK D A +++I C R + E
Sbjct: 424 --------MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
A++G L + N + ++ + M G + + L++ + A + A +
Sbjct: 476 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAV 535
Query: 418 FSLL--PEDQK---CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ D+K ++ AL+ G D A ++ M +G ++ ++N LL+G
Sbjct: 536 LEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSG 595
Query: 473 LEKLGRVSDA 482
L +L R +A
Sbjct: 596 LSRLQRWDEA 605
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 103/244 (42%), Gaps = 8/244 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A+ F + S + TY+T+ + R++ +F ++ +KG + D TYT
Sbjct: 388 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYT 447
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ V + EEM K P + + +A + LF + + A ++ M R
Sbjct: 448 SLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 507
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM---QEAGVQPDKAACNILIEKCCKAGET 222
G + Y +++E + RA K+++AL + ++ ++ P +A + L+E C+ G+T
Sbjct: 508 GCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKT 567
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+L M E A + L W Q +S A E
Sbjct: 568 DDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQR-----WDEATQVFEAMVSAGPAPEIS 622
Query: 283 TTDI 286
T ++
Sbjct: 623 TVNV 626
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM---QEKGINIDAVT 103
E+A F+ ++ +RG D Y +++ A + V E + +++ N +
Sbjct: 495 ERAIQLFDSMA-ARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSA 553
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+++ L G D A + +M + + SY + L R EAT V++ M+
Sbjct: 554 VDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMV 613
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G P T V++ +L A K ++A E+ +M + G PD CN LI CK+G
Sbjct: 614 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRAD 673
Query: 224 TIILILRYMKENRL 237
+L M E L
Sbjct: 674 LARKLLEEMTEAGL 687
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF +Y +L +R VFE M G + T V+ WL +A VD
Sbjct: 580 RGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDD 639
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + + M C P I + + + R A + +EM + GL PN T+ +L
Sbjct: 640 AYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 191/447 (42%), Gaps = 23/447 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++++ +A+ + V M + G+ D +TY S++H ++G
Sbjct: 230 RGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 289
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++M+ P +V+Y++ M L N R EA ++ M +RGL P+ TY L++
Sbjct: 290 AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 349
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G E + M G+QPD NILI K + +L+ M+++ L
Sbjct: 350 GYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP 409
Query: 240 RYPVFKEALQTF-KVADENDSLLW---QVHPQFSPEFISDNDAVEFVTT----DIEGPL- 290
+ + K +D++L+ + +P I + + T D L
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Query: 291 --SIDQGLVLILL----------KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+D+G+ L + K+ ++ + L ++ ++ D +T+I+ C
Sbjct: 470 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 529
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ D A V + + + Y LI +++ + +EM +G S +
Sbjct: 530 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 589
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
+++ L RR A +++ + + Q +TY ++ D+AL++++ +C
Sbjct: 590 NIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 649
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ TFN+++ L K GR+ +A+
Sbjct: 650 TDLQLETRTFNIMIGALLKCGRMDEAK 676
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 178/436 (40%), Gaps = 27/436 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAV 121
D F+Y +L + R + +M + G D V+Y +V++ GD D A
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ + EM + P +V+Y++ + L + +A +V M++ G+ P+C TY ++
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+G+ +EA+ KM+ GV+P+ + L+ CK G + I M + L
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
++ LQ + L ++H V I+ + L+
Sbjct: 342 ATYRTLLQGYATK----GALVEMHALLDL----------MVRNGIQPDHHVFNILICAYA 387
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K++ + + S + + + T+I+V C D A+L FE + L
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +LI L + + K E++ EM G L +I R + + K+F L+
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 422 ------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
P+ TY LI AG D+A K+ +M G+ P + T+ L+ G +
Sbjct: 508 VRIGVKPD----IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563
Query: 476 LGRVSDAEIYRKEKKS 491
+ R+ DA KE S
Sbjct: 564 VSRMDDALALFKEMVS 579
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 155/365 (42%), Gaps = 36/365 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + ++ + + +++ VF M++ G+N + V Y +V+ L +G VD A
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+M + P I+ YT+ + L D+ +A ++ EM+ RG+ N + +++
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDS 490
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ E+ ++F M GV+PD N LI+ CC AG+ +L M +
Sbjct: 491 HCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + +V+ +D+L E +S + +T +I I QGL
Sbjct: 551 IVTYGTLINGYCRVSRMDDAL------ALFKEMVSSGVSPNIITYNI-----ILQGL--- 596
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ A L I QL+ + + I+ C + D AL F+ DL LE
Sbjct: 597 -FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 655
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+ +IG L+K + ++ A H SA VP + +S
Sbjct: 656 TRTFNIMIGALLKCGRMDEAKDLF-----AAH---------------SANGLVPDVRTYS 695
Query: 420 LLPED 424
L+ E+
Sbjct: 696 LMAEN 700
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 181/456 (39%), Gaps = 55/456 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI-WEE 126
TY ++ A R+ + +KG +DA+T+T ++ L A++I
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDV---------------------------- 158
M C P + SY +K L +R +EA ++
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 159 ----------YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
Y EM+ RG+ P+ TY+ ++ L +A ++A+E+ + M + GV PD
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
N ++ C +G+ + I L+ M+ + + + + + L +
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM----------NYLCKNGRST 323
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
I D+ + DI ++ QG K LV + +LL ++ IQ D V
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYA----TKGALVEMHALLDLMVRNGIQPDHHVF 379
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ +I + D A+L F + LN Y +I +L K + E+M
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT--YTALIGVYFSAGSADK 446
G + + + LIH L + + A ++ + + C T + ++I + G +
Sbjct: 440 EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ K++ M R G+ P + T+N L+ G G++ +A
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M+ A F + S G + + TY +L +R ++ K ++ + + G ++ TY
Sbjct: 567 MDDALALFKEMVSS-GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++H L D A+ +++ + L + ++ + L R+ EA D++
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GL P+ TY+++ E L+ G EE ++F M+E G D N ++ K + G+
Sbjct: 686 GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 109/271 (40%), Gaps = 42/271 (15%)
Query: 6 SNVYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPMEK---AWLFFNWVSRS 59
S ++ + WD A++L+ + I ++ N ++ +H + + F+ + R
Sbjct: 451 SLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 510
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G D TY T++D A ++ + M G+ D VTY ++++ +D
Sbjct: 511 -GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG------------- 166
A+ +++EM P I++Y ++ LF R A ++Y + + G
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629
Query: 167 ----------------------LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L T+ +++ L++ G+ +EA ++F+ G+ P
Sbjct: 630 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVP 689
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKEN 235
D +++ E + G + + M+EN
Sbjct: 690 DVRTYSLMAENLIEQGSLEELDDLFLSMEEN 720
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 123/329 (37%), Gaps = 52/329 (15%)
Query: 155 ATDVYKEMIQRG---LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
A Y M + G + P +TY +L+ RAG+ + + + G + D
Sbjct: 73 AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132
Query: 212 LIEKCCKAGETRTII-LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
L++ C T + ++LR M E L VF + DEN S
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTE--LGCIPDVFSYNNLLKGLCDENRS----------- 179
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+A+E + ++ D+G ++V+ +++L+G + DS
Sbjct: 180 -----QEALELLHM-----MADDRGGG----SPPDVVSYNTVLNGFFKEG---DS----- 217
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
D A + + + + Y ++I L K K E++ M K G
Sbjct: 218 -----------DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKAL 448
++H S+ +P A + D + TY++L+ G + +A
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
KI+ +M ++G+ P + T+ LL G G
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKG 355
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 191/447 (42%), Gaps = 23/447 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++++ +A+ + V M + G+ D +TY S++H ++G
Sbjct: 230 RGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKE 289
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++M+ P +V+Y++ M L N R EA ++ M +RGL P+ TY L++
Sbjct: 290 AIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQ 349
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G E + M G+QPD NILI K + +L+ M+++ L
Sbjct: 350 GYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNP 409
Query: 240 RYPVFKEALQTF-KVADENDSLLW---QVHPQFSPEFISDNDAVEFVTT----DIEGPL- 290
+ + K +D++L+ + +P I + + T D L
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Query: 291 --SIDQGLVLILL----------KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+D+G+ L + K+ ++ + L ++ ++ D +T+I+ C
Sbjct: 470 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 529
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ D A V + + + Y LI +++ + +EM +G S +
Sbjct: 530 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 589
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
+++ L RR A +++ + + Q +TY ++ D+AL++++ +C
Sbjct: 590 NIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 649
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ TFN+++ L K GR+ +A+
Sbjct: 650 TDLQLETRTFNIMIGALLKCGRMDEAK 676
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 177/433 (40%), Gaps = 27/433 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAV 121
D F+Y +L + R + +M + G D V+Y +V++ GD D A
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ + EM + P +V+Y++ + L + +A +V M++ G+ P+C TY ++
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+G+ +EA+ KM+ GV+P+ + L+ CK G + I M + L
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
++ LQ + L ++H V I+ + L+
Sbjct: 342 ATYRTLLQGYATK----GALVEMHALLD----------LMVRNGIQPDHHVFNILICAYA 387
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K++ + + S + + + T+I+V C D A+L FE + L
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +LI L + + K E++ EM G L +I R + + K+F L+
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 422 ------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
P+ TY LI AG D+A K+ +M G+ P + T+ L+ G +
Sbjct: 508 VRIGVKPD----IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563
Query: 476 LGRVSDAEIYRKE 488
+ R+ DA KE
Sbjct: 564 VSRMDDALALFKE 576
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 155/365 (42%), Gaps = 36/365 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + ++ + + +++ VF M++ G+N + V Y +V+ L +G VD A
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDA 430
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+M + P I+ YT+ + L D+ +A ++ EM+ RG+ N + +++
Sbjct: 431 MLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDS 490
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ E+ ++F M GV+PD N LI+ CC AG+ +L M +
Sbjct: 491 HCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 550
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + +V+ +D+L E +S + +T +I I QGL
Sbjct: 551 IVTYGTLINGYCRVSRMDDAL------ALFKEMVSSGVSPNIITYNI-----ILQGL--- 596
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ A L I QL+ + + I+ C + D AL F+ DL LE
Sbjct: 597 -FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 655
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+ +IG L+K + ++ A H SA VP + +S
Sbjct: 656 TRTFNIMIGALLKCGRMDEAKDLF-----AAH---------------SANGLVPDVRTYS 695
Query: 420 LLPED 424
L+ E+
Sbjct: 696 LMAEN 700
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 181/456 (39%), Gaps = 55/456 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI-WEE 126
TY ++ A R+ + +KG +DA+T+T ++ L A++I
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDV---------------------------- 158
M C P + SY +K L +R +EA ++
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 159 ----------YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
Y EM+ RG+ P+ TY+ ++ L +A ++A+E+ + M + GV PD
Sbjct: 214 EGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
N ++ C +G+ + I L+ M+ + + + + + L +
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLM----------NYLCKNGRST 323
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
I D+ + DI ++ QG K LV + +LL ++ IQ D V
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYA----TKGALVEMHALLDLMVRNGIQPDHHVF 379
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ +I + D A+L F + LN Y +I +L K + E+M
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT--YTALIGVYFSAGSADK 446
G + + + LIH L + + A ++ + + C T + ++I + G +
Sbjct: 440 EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ K++ M R G+ P + T+N L+ G G++ +A
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M+ A F + S G + + TY +L +R ++ K ++ + + G ++ TY
Sbjct: 567 MDDALALFKEMVSS-GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++H L D A+ +++ + L + ++ + L R+ EA D++
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GL P+ TY+++ E L+ G EE ++F M+E G D N ++ K + G+
Sbjct: 686 GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 741
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 108/269 (40%), Gaps = 42/269 (15%)
Query: 8 VYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPMEK---AWLFFNWVSRSRG 61
++ + WD A++L+ + I ++ N ++ +H + + F+ + R G
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI-G 511
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D TY T++D A ++ + M G+ D VTY ++++ +D A+
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG--------------- 166
+++EM P I++Y ++ LF R A ++Y + + G
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631
Query: 167 --------------------LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
L T+ +++ L++ G+ +EA ++F+ G+ PD
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691
Query: 207 AACNILIEKCCKAGETRTIILILRYMKEN 235
+++ E + G + + M+EN
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEEN 720
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 123/329 (37%), Gaps = 52/329 (15%)
Query: 155 ATDVYKEMIQRG---LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
A Y M + G + P +TY +L+ RAG+ + + + G + D
Sbjct: 73 AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132
Query: 212 LIEKCCKAGETRTII-LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
L++ C T + ++LR M E L VF + DEN S
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTE--LGCIPDVFSYNNLLKGLCDENRS----------- 179
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+A+E + ++ D+G ++V+ +++L+G + DS
Sbjct: 180 -----QEALELLHM-----MADDRGGG----SPPDVVSYNTVLNGFFKEG---DS----- 217
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
D A + + + + Y ++I L K K E++ M K G
Sbjct: 218 -----------DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKAL 448
++H S+ +P A + D + TY++L+ G + +A
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
KI+ +M ++G+ P + T+ LL G G
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKG 355
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 199/447 (44%), Gaps = 38/447 (8%)
Query: 61 GFNHDRFTYTTML-DIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDV 117
G+ D F+Y ++ + E K +++ + + + G N + V+Y++++ G+V
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A +++EM + P +V+Y++ + L + +A + + M +G+ PN TY ++
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ G+ EEA+ + KM +G+QPD +LI+ CK G R
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIG---------------RC 324
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQV--HPQFSPEFISD-NDAVEFVTTDIEGPLSIDQ 294
A VF ++ + +S ++ + H + + D D ++ + D P
Sbjct: 325 AEARSVFDSMVRK---GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD-GIPFEHRA 380
Query: 295 GLVLILLKKKNLVAIDSLLSGIMD---KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+LI K+ A+D ++ + ++ D ST+I + C R + A+ F
Sbjct: 381 FNILICAYAKH-GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQM 439
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARR 410
V L+ ++ +LI L + + KV E+ EM G H +++ ++ L R
Sbjct: 440 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIM-DNLCKEGR 498
Query: 411 PVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
V A F ++ + +Y LI Y G D+++K + M G+ P T+N
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558
Query: 469 LLAGLEKLGRVSDA-----EIYRKEKK 490
LL G K GRV DA E++RK+ K
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVK 585
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 189/461 (40%), Gaps = 24/461 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA+ F+ + +GF D TY++++D +A+ ++ + + + M +KG+ + TY
Sbjct: 219 VDKAYFLFDEMI-GQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYN 277
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + G ++ AV + ++M P +V+Y ++ R EA V+ M+++
Sbjct: 278 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRK 337
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN Y +L+ G + ++ M G+ + A NILI K G
Sbjct: 338 GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 397
Query: 226 ILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFIS------- 274
+ M++N L + + +V D V SP IS
Sbjct: 398 MTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHG 457
Query: 275 ----------DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+ A E + I ++ L K+ +V ++ ++ +
Sbjct: 458 LCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPN 517
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+T+I+ C + D ++ F+ V + L + Y AL+ K +
Sbjct: 518 VVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYR 577
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAG 442
EM + +++H L A R V A +++ + + Q TY ++G
Sbjct: 578 EMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENS 637
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
D+AL++++ + K + TFN+++ L K+GR+ +A+
Sbjct: 638 CVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAK 678
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H ++KA F + R G D +Y+T++ I + R+ Y F M +G++ + +
Sbjct: 391 HGAVDKAMTAFTEM-RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNII 449
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
++TS++H L + G+ + EM + +P + M L RV EA D + +
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 509
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
I G+ PN +Y L++ GK +E+++ F +M G++PD N L+ K G
Sbjct: 510 IHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRV 569
Query: 223 RTIILILRYM 232
+ + R M
Sbjct: 570 EDALALYREM 579
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D + ++ ++ DS+T N +L + +E A + + R + T +L +
Sbjct: 542 DRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFR-KDVKFCAITSNIILHGLFQ 600
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A RI + + ++ M ++G + TY +V+ L VD A+ ++E+++ KE + +
Sbjct: 601 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWT 660
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ + L R+ EA ++ M+ RG P+ TY+++++ + G EE+ ++F M+
Sbjct: 661 FNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSME 720
Query: 199 EAGVQPDKAACNILIEKCCKAGETR 223
+ G D N++I + + G+ R
Sbjct: 721 KNGCAADSHMLNVIIRRLLEKGDVR 745
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 67/146 (45%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+L E + +FE ++ K +D T+ V++ L G +D A +++ M
Sbjct: 625 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAM 684
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L+ P +++Y+ +K ++E+ D++ M + G + + V++ L+ G
Sbjct: 685 VLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDV 744
Query: 188 EEALEIFSKMQEAGVQPDKAACNILI 213
A +K+ E + + +LI
Sbjct: 745 RRAGTYLTKIDEKNFSVEASTAALLI 770
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/523 (21%), Positives = 219/523 (41%), Gaps = 32/523 (6%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L +K D V ++LK + FF W + R F HD T
Sbjct: 61 RILKIFKWGPDAEKALEVLKLKVDPRLVREILKIDVEVSVKIQFFKWAGKRRNFEHDSTT 120
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ E + + + M + + + ++ L A V+ A++++ ++K
Sbjct: 121 YMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVK 180
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKY 187
++C PT +Y + + +L ++ ++Y EM P+ TY+ L+ + +
Sbjct: 181 GRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRD 240
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ A+ +F +M+E G+QP L+ K G+ + +++ M+ R L + E
Sbjct: 241 DSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTEL 300
Query: 248 LQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFV--TTDIEGPLSIDQGLVLILL 301
++ +V D + + P+ + N+ + + + + + + + L L
Sbjct: 301 IRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKL-LN 359
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSA-----------------VISTIIEVNCDHRRRDGA 344
N+V ++++ + + L A S +I+ C R + A
Sbjct: 360 CAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKA 419
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
LL E + AY +LI L + E+ +E+ + + A++I
Sbjct: 420 LLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKH 479
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
G R A +F+ + + CT Y AL+ A D+A +++TM G P
Sbjct: 480 FGKCGRLNEAINLFNEM-KKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTP 538
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ + N++L GL + G A E++ K K S I+ D +S + +
Sbjct: 539 DINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTI 581
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA L + +GF Y ++++ G AKR +F+ ++E A Y
Sbjct: 416 VEKALLLLEEMD-EKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYA 474
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ G ++ A+N++ EMK C P + +Y A M + +R+ EA +++ M +
Sbjct: 475 VMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEEN 534
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G P+ ++ +++ L R G + ALE+F+KM+ + ++PD + N ++ +AG
Sbjct: 535 GCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAG 589
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y M+ FG+ R++ +F M++ G D Y ++M + A +D A +++ M+
Sbjct: 473 YAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTME 532
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P I S+ + L K A +++ +M + P+ ++ ++ L RAG +E
Sbjct: 533 ENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFE 592
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
EA ++ +M G Q D + ++E K + + +
Sbjct: 593 EAAKLMQEMSSKGFQYDLITYSSILEAVGKVDDCKMV 629
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + Y ++ A+R+ +F M+E G D ++ +++ L+ G GA
Sbjct: 500 GCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGA 559
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ +MK P +VS+ + L +EA + +EM +G + TY+ ++E
Sbjct: 560 LEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILE 618
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 206/490 (42%), Gaps = 29/490 (5%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
+R+ +S++ K+ D D++K+ P N++L M K L + + +
Sbjct: 54 LRNRLSDIIKV--DDAVDLFGDMVKSRPFP-SIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 61 --GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G +HD +TY+ ++ F ++S V M + G D VT +S+++ ++ +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV + ++M P ++T + LFL+++ EA + +M+QRG P+ TY ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + G + AL + +KM+ A ++ + N +I+ CK + + M+ +
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 239 LRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + + +D + L + + +P ++ N
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN------------------ 332
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ K+ LV + L ++ +SI D+ + +I C H R D A F++ V
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
D Y LI K E+ EM++ G +I A A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 415 AKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+F + ++ T TY+ L+ S G D AL I+K + + + ++ +N ++ G
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 473 LEKLGRVSDA 482
+ K G+V +A
Sbjct: 513 MCKAGKVGEA 522
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 164/424 (38%), Gaps = 86/424 (20%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ T++D + + + +F M+ KGI + VTY S+++ L N G A + M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K+ P +V++ A + F ++ EA +++EMIQR + P+ TY +L+ + +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA ++F M P+ N LI CK + + R M + L + +
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
Q F A + DS + +S+ + +T I
Sbjct: 441 QGFFQAGDCDS-----AQMVFKQMVSNRVPTDIMTYSI---------------------- 473
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
LL G+ C + + D AL+ F+Y K ++ L Y
Sbjct: 474 ---LLHGL-------------------CSYGKLDTALVIFKYLQKSEMELNIFIY----- 506
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
NT ++E M KAG ++G A + S+ P+
Sbjct: 507 -----NT------MIEGMCKAG-------------KVGEAWDLFCS---LSIKPD----V 535
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-AGLEKLGRVSDAEIYRK 487
TY +I S +A +++ M G P+ GT+N L+ A L R + AE+ ++
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595
Query: 488 EKKS 491
+ S
Sbjct: 596 MRSS 599
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 3/168 (1%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ F + KR+ +F M ++G+ + VTYT+++ AGD D A ++++M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
I++Y+ + L ++ A ++K + + + N + Y ++E + +AGK
Sbjct: 460 VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
EA ++F + ++PD N +I C + + R MKE+
Sbjct: 520 GEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TYTT++ F +A S + VF+ M + D +TY+ ++H L + G +D
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I++ ++ E I Y ++ + +V EA D++ + + P+ TY ++
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMIS 543
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
L +EA ++F KM+E G P+ N LI
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 61/352 (17%), Positives = 136/352 (38%), Gaps = 53/352 (15%)
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+V +A D++ +M++ P+ + L+ + + K+E + + +MQ G+ D +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
I I C + ++L+L V + ++ + P
Sbjct: 123 IFINCFC---------------RRSQLSLALAVLAKMMKL----------------GYEP 151
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ ++ +++ + G K + +L+ +++ + D+ +T
Sbjct: 152 DIVT-------LSSLLNG-----------YCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I H + A+ + V+ + Y ++ L K ++ +M A
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKAL 448
V + +I L R A +F+ + + TY +LI + G A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
++ M K I+P++ TFN L+ K G++ +AE +E ++SI D ++
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/541 (21%), Positives = 222/541 (41%), Gaps = 98/541 (18%)
Query: 24 LKNLPIKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+K + D YT N ++ + ++A F+ + ++ GF D+ T+ ++LD++G+A+
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEM-KASGFEPDKVTFNSLLDVYGKAR 274
Query: 81 R--------------------------ISS------MKYVFELMQE---KGINIDAVTYT 105
R ISS ++ L QE KG+ D VTYT
Sbjct: 275 RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYT 334
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL------------------- 146
+++ L AG +D A+ ++EM C P + +Y A +K+
Sbjct: 335 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSA 394
Query: 147 -FLNDRV---------------KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
F+ D V E + V+KEM + G P TY L+ R G ++ A
Sbjct: 395 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 454
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++I+ +M EAG+ PD + N ++ + G + M+E + L
Sbjct: 455 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 514
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
+ A D + + +SD + + IE + + LVL+ K NL +
Sbjct: 515 YANAKRLDKM----------KALSD----DIYSERIEPHNWLVKTLVLVNSKVNNLAEAE 560
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+ K LD V++ ++ + +R + +NL Y +L+ +
Sbjct: 561 KAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMY 620
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA- 429
+L K I+ E+ +G Y +I+ G + A+++FS + KC+
Sbjct: 621 SRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFS----EMKCSGL 676
Query: 430 -----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY + Y S ++A+++ + M +G P+ T+N ++ G + G+++DA+I
Sbjct: 677 KPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKI 736
Query: 485 Y 485
+
Sbjct: 737 F 737
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 166/394 (42%), Gaps = 44/394 (11%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME-YLVRAGKYEEALE 192
P +YTA + R ++A V++ M+ G+ P TY V++ Y A ++E +E
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+ + M+E GV PD+ N LI C + + + MK + F L +
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271
Query: 253 VADENDSLLWQVHPQ----FSPEFISDNDAVEFVTTD--IEGPLSIDQGLVLILLKKKNL 306
A +D + + P ++ N + D +E +++ Q + + + K ++
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGM-KPDV 330
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
V +L+SG +D++ ++D+A+ V D R+G K +L Y AL
Sbjct: 331 VTYTTLISG-LDRAGKIDAAI------VEYDEMVRNGC--------KPNL----CTYNAL 371
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SL 420
I + FP++ + +E AG + L+ G + +F
Sbjct: 372 IKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 431
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+PE TY +LI Y G D A++IYK M GI+P + T+N +L+ L + GR
Sbjct: 432 IPERD----TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 487
Query: 481 DAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
AE + A+ +D P E LL+
Sbjct: 488 QAE-------KLFAEMEERDCKPDEYSYSSLLHA 514
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 191/490 (38%), Gaps = 58/490 (11%)
Query: 35 TVNQVLKTHPPMEKAW---LFFNWVSRSRGFNHDRFTYTT-------------------- 71
T N VL + M W + + G DR+TY T
Sbjct: 191 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 250
Query: 72 ---------------MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+LD++G+A+R V + M+ G VTY S++ G
Sbjct: 251 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGL 310
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ AV + +EM++K P +V+YT + L ++ A Y EM++ G PN TY
Sbjct: 311 LEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNA 370
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ GK+ E + +F + + AG PD N L+ + G + + + MK+
Sbjct: 371 LIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAG 430
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ + ++ D L Q++ + + I +S +
Sbjct: 431 YIPERDTYVSLISSYSRCGLFD-LAMQIYKR-------------MMEAGIYPDVSTYNAV 476
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD--GALLAFEYSVKM 354
+ L + + L + + ++ + D S+++ + +R D AL YS ++
Sbjct: 477 LSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERI 536
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + L L+ K+N + + E+ + SL + + ++ G R
Sbjct: 537 EPHNWLVKTLVLVN--SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKV 594
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
KI SL+ E ATY +L+ +Y G +K I + G+ P ++N ++
Sbjct: 595 EKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYA 654
Query: 473 LEKLGRVSDA 482
+ G++ +A
Sbjct: 655 YGRKGQMKEA 664
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 108/294 (36%), Gaps = 58/294 (19%)
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ RAG+ EA S + +A PD A L+ +AG R + + R M ++ +
Sbjct: 133 MARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGV--- 185
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ A+ T+ V V +S + + VE V + E ++ D+ L
Sbjct: 186 ----QPAIVTYNV----------VLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTL 231
Query: 301 LKKKNLVAIDSLLSGIMDK----SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ A+ + + D+ + D +++++V RR D A+ + ++
Sbjct: 232 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 291
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y +LI +K + + +EM G
Sbjct: 292 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG-------------------------- 325
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+ P+ TYT LI AG D A+ Y M R G P+L T+N L+
Sbjct: 326 ---MKPD----VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALI 372
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 188/456 (41%), Gaps = 35/456 (7%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
+ L+ H +E F+ + + + N + TY T+ I + M++ G
Sbjct: 130 EFLRVHGRVEDMAFVFDLMQK-QVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGF 188
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
++A +Y ++++L G A+ +++ M + P++ +Y+A M L D
Sbjct: 189 VLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMD 248
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ +EM GL PN YTYT+ + L RAG+ ++A I M++ G PD +LI+ C
Sbjct: 249 LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALC 308
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTF-----KVADENDSLLWQVHPQFSPEF 272
AG+ L KE +R K L T+ K + D + +F E
Sbjct: 309 AAGK-------LDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGD---LETVKRFWSEM 358
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+D A + VT I LV L K + +L + + I + +T+I
Sbjct: 359 EADGYAPDVVTYTI---------LVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLI 409
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ RR D AL F + + +Y+ I KL K + E+M K G
Sbjct: 410 SGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIM 469
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADK 446
+ ++ L R A IF+ L P+ + TY ++ Y AG DK
Sbjct: 470 PSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPD----SVTYNMMMKCYSKAGQIDK 525
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A K+ M +G P + N L+ L K GRV +A
Sbjct: 526 ATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 179/435 (41%), Gaps = 37/435 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D TY M+ + +A +I + M +G D + S++ L AG VD A
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ +K + PT+V+Y + L ++ +A D++ M + G PPN T+ L++
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE----NR 236
L + + AL++F +M PD N +I K G MK+ +
Sbjct: 622 LCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDH 681
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHP---QFSPEFISDNDAVEFVTTDIEGPLSID 293
+ L Y + ++ +V D ++ VH Q S + + + +IE +S
Sbjct: 682 VTL-YTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFA 740
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR-DGALLAFEYSV 352
+GLV SI D +I +I V C ++ D L +++
Sbjct: 741 EGLVC--------------------NSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTK 780
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ + +Y L+ L+ N ++ EM AG ++ LL+ G ++R
Sbjct: 781 SLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKR-- 838
Query: 413 PAAKIFSLLPE--DQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
++F L E + C T+ +I + S +KAL +Y + P+ T+
Sbjct: 839 -IDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYG 897
Query: 468 VLLAGLEKLGRVSDA 482
L+ GL K GR +A
Sbjct: 898 PLIGGLLKAGRSEEA 912
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +++ FG+A ++ +F+ M ++GI D +YT ++ L G VD AV+ +EE+K
Sbjct: 931 YNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELK 990
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
L P VSY + L + R++EA ++ EM RG+ P YTY L+ + AG +
Sbjct: 991 LTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVD 1050
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+A ++F ++Q G++P+ N LI K+G + + M
Sbjct: 1051 QAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 174/467 (37%), Gaps = 58/467 (12%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
LK+ A +F VS+ H T ML+ R+ M +VF+LMQ++ IN
Sbjct: 96 LKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINR 155
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ TY ++ LS G + A +M+ SY + L KEA VY
Sbjct: 156 NPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVY 215
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
K MI GL P+ TY+ LM L R +++ +M+ G++P+ I I +A
Sbjct: 216 KRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRA 275
Query: 220 GETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
G IL+ M++ + Y V +AL D+ L ++
Sbjct: 276 GRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKP----- 330
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
D V ++T L+ +L + S + D + ++E C
Sbjct: 331 DLVTYIT------------LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALC 378
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ D A + + Y LI L+ L + E+ M SLGV
Sbjct: 379 KSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNM----ESLGV- 433
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
P A +Y I Y G +KAL ++ M +
Sbjct: 434 ---------------APTA-------------YSYVLFIDYYGKLGDPEKALDTFEKMKK 465
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
+GI PS+ N L L ++GR+ +A +I+ I LS D+V
Sbjct: 466 RGIMPSIAACNASLYSLAEMGRIREAKDIF----NDIHNCGLSPDSV 508
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 186/457 (40%), Gaps = 25/457 (5%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V R RG + TY T++ +R+ +F M+ G+ A +Y + + G
Sbjct: 392 VMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLG 451
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D + A++ +E+MK + P+I + A + L R++EA D++ ++ GL P+ TY
Sbjct: 452 DPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYN 511
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++M+ +AG+ ++A ++ ++M G +PD N LI+ KAG + +K+
Sbjct: 512 MMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDL 571
Query: 236 RLA---LRYPVFKEAL----QTFKVADENDSLLWQVHPQFSPEF------ISDNDAVEF- 281
+LA + Y + L + K D S+ P + F + NDAV+
Sbjct: 572 KLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLA 631
Query: 282 ------VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE-V 334
+T P + ++ L K+ M K + D + T++ V
Sbjct: 632 LKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGV 691
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
D R D + E+ + L + L+ ++ + E +
Sbjct: 692 VKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQD 751
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPED---QKCTATYTALIGVYFSAGSADKALKIY 451
L LI L ++ + A K+F + +Y L+ + ALK++
Sbjct: 752 DNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLF 811
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
M G P++ T+N+LL K R+ + E+Y +
Sbjct: 812 VEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNE 848
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 82/157 (52%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G + FTY +LD G++KRI + ++ M +G + +T+ ++ L + +
Sbjct: 815 KNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSI 874
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A++++ E+ + PT +Y + L R +EA +++EM PNC Y +L
Sbjct: 875 NKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNIL 934
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ +AG A ++F +M + G++PD + IL+E
Sbjct: 935 INGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVE 971
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 153/391 (39%), Gaps = 51/391 (13%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ K + + K + + G + +Y +M L + A+ ++ EMK C P I
Sbjct: 765 QKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIF 824
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + + R+ E ++Y EM+ RG PN T+ +++ LV++ +AL+++ ++
Sbjct: 825 TYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEI 884
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
P LI KAG + +EA++ F+ +
Sbjct: 885 ISGDFSPTPCTYGPLIGGLLKAGRS----------------------EEAMKIFEEMPD- 921
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
+Q P N A+ + + G K N+ L ++
Sbjct: 922 ----YQCKP---------NCAIYNILINGFG-------------KAGNVNIACDLFKRMI 955
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+ I+ D + ++E R D A+ FE L+ + +Y +I L K
Sbjct: 956 KEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLE 1015
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP--EDQKCTATYTALI 435
+ + EM G S +Y LI G+A A K+F L + TY ALI
Sbjct: 1016 EALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALI 1075
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ +G+ D+A ++K M G P+ GTF
Sbjct: 1076 RGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S F+ TY ++ +A R +FE M + + Y +++ AG+V+
Sbjct: 886 SGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVN 945
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++++ M + P + SYT ++ LF+ RV +A ++E+ GL P+ +Y +++
Sbjct: 946 IACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMI 1005
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L ++ + EEAL +FS+M+ G+ P+ N LI AG
Sbjct: 1006 NGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAG 1047
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
F+ ++S G + +Y ++D + +F M+ G + TY ++
Sbjct: 774 LFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAH 833
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+ +D ++ EM + C P I+++ + L ++ + +A D+Y E+I P
Sbjct: 834 GKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTP 893
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII-LILR 230
TY L+ L++AG+ EEA++IF +M + +P+ A NILI KAG L R
Sbjct: 894 CTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKR 953
Query: 231 YMKE 234
+KE
Sbjct: 954 MIKE 957
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +YT +++ R+ + FE ++ G++ D V+Y +++ L + ++ A
Sbjct: 958 GIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEA 1017
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ EMK + P + +Y A + V +A +++E+ GL PN +TY L+
Sbjct: 1018 LSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRG 1077
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
++G + A +F KM G P+ L KC
Sbjct: 1078 HSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNKC 1113
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 184/456 (40%), Gaps = 67/456 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ G+ ++ +F M+E G + VT+ +++ L VD A+ ++ M
Sbjct: 579 TYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRM 638
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT------------ 175
+ C P +++Y + L R A Y +M + P + YT
Sbjct: 639 TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVE 698
Query: 176 ----VLMEYLVRAG---------KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++ME++ ++G + E + I ++++EA + CN + + +
Sbjct: 699 DAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQ------DD 752
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
I+ ++R + + K+AL K+ D+ L HP +PE + +
Sbjct: 753 NLILPLIRVLCKQ---------KKALDAKKLFDKFTKSLG-THP--TPE------SYNCL 794
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
+ G +I + + + ++ KN ++ + + +++ + +R D
Sbjct: 795 MDGLLG-CNITEAALKLFVEMKNAGCCPNIFT-------------YNLLLDAHGKSKRID 840
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
+ + + +I L+K N+ K ++ E+ S LI
Sbjct: 841 ELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLI 900
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L A R A KIF +P D +C A Y LI + AG+ + A ++K M ++GI
Sbjct: 901 GGLLKAGRSEEAMKIFEEMP-DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGI 959
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
P L ++ +L+ L GRV DA Y +E K D
Sbjct: 960 RPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLD 995
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 139/362 (38%), Gaps = 60/362 (16%)
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
+PT SY M L + + A ++ EM G PN +TY +L++ ++ + +E E
Sbjct: 785 HPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFE 844
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
++++M G +P+ NI+I K+ L L Y +
Sbjct: 845 LYNEMLCRGCKPNIITHNIIISALVKSNSI-----------NKALDLYYEI--------- 884
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
+ FSP T GPL + LLK +
Sbjct: 885 -----------ISGDFSP------------TPCTYGPL------IGGLLKAGRSEEAMKI 915
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+ D + + A+ + +I + A F+ +K + + +Y L+ L
Sbjct: 916 FEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFM 975
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQK 426
EE+ G L+I+ LG +RR A +FS + PE
Sbjct: 976 TGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPE--- 1032
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIY 485
TY ALI + +AG D+A K+++ + G+ P++ T+N L+ G K G A ++
Sbjct: 1033 -LYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVF 1091
Query: 486 RK 487
+K
Sbjct: 1092 KK 1093
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F+ + ++RG + + +TY ++ FG A + +FE +Q G+ + TY
Sbjct: 1014 LEEALSLFSEM-KNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYN 1072
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+++ S +G+ D A +++++M + C P ++
Sbjct: 1073 ALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 194/487 (39%), Gaps = 58/487 (11%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V +LK+ A+ +F VS+ F H ML+I E +RI M +VF+LMQ+K
Sbjct: 101 VMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKK 160
Query: 96 GINIDAVTYTSVMHWLSNAGDV----------------------------------DGAV 121
I + TY ++ LS G + + A+
Sbjct: 161 VIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEAL 220
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+++ M + P++ +Y+A M L ++ ++ +EM GL PN YTYT+ + L
Sbjct: 221 KVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRAL 280
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
RA + ++A IF +M + G PD +LI+ C AG+ + M+ + +
Sbjct: 281 GRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDR 340
Query: 242 PVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F KV D + +F E D A + VT I L+ L
Sbjct: 341 VTYITLMDKFGKVGD------LETVKRFWNEMEVDGYAPDVVTYTI---------LIEAL 385
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K ++ +L + K I + +T+I RR D AL E + +
Sbjct: 386 CKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTA 445
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+Y+ I K K + E M K G + ++ L R A IF+
Sbjct: 446 FSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFND 505
Query: 421 LPEDQKC-----TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
L KC + TY L+ Y AG DKA ++ M KG P + N L+ L K
Sbjct: 506 L---HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYK 562
Query: 476 LGRVSDA 482
GRV A
Sbjct: 563 AGRVDAA 569
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 179/444 (40%), Gaps = 28/444 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW F + G D TYT ++D A ++ K ++ M+ + D VTY
Sbjct: 286 IDDAWGIFKEMD-DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYI 344
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++M GD++ W EM++ P +V+YT ++ L + V A D+ M +
Sbjct: 345 TLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTK 404
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN +TY ++ L++A + +EALE+ M+ GV+P + + I+ K+G+
Sbjct: 405 GIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKA 464
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVA---DENDSLLWQVHP-QFSPEFISDNDAVEF 281
I MK+ + +L T E + + +H SP+ ++ N ++
Sbjct: 465 IDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKC 524
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+ K + LLS ++ K + D +I+++I R
Sbjct: 525 YS------------------KAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRV 566
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D A F + L Y L+ L K K E+ MT++G L
Sbjct: 567 DAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSL 626
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKG 458
+ L A K+F + C TY +I G D A + M +K
Sbjct: 627 LDCLSKNDAVDLALKMFCRMTM-MNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKF 684
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
+ P T L+ G+ + GRV DA
Sbjct: 685 LSPDYVTLCTLIPGVVRHGRVEDA 708
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 97/175 (55%), Gaps = 1/175 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKA F + +S G + + FTY +LD G++KRI+ + ++ M+ +G +A+T+
Sbjct: 813 EKALELFEDM-KSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNI 871
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L + +++ A++++ E+ + PT +Y + L R ++A +++EM+ G
Sbjct: 872 IISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYG 931
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
PN Y +L+ ++G+ + A E+F KM + G++PD + IL+E C G
Sbjct: 932 CGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGR 986
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y +++ FG++ I +F+ M ++GI D +YT ++ L G +D A
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V +EE+KL P VSY + L + R+ EA ++ EM RG+ P+ YTY L+ +
Sbjct: 991 VQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILH 1050
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
L AGK + A++++ ++Q G++P N LI
Sbjct: 1051 LGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIR 1084
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S F+ TY ++D +A R +FE M + G ++V Y +++ +G++D
Sbjct: 894 SGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEID 953
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++++M + P + SYT ++ L + R+ EA ++E+ GL P+ +Y ++
Sbjct: 954 FACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFII 1013
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L ++ + +EAL +FS+M+ G+ PD N LI AG+
Sbjct: 1014 NGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGK 1056
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 161/413 (38%), Gaps = 52/413 (12%)
Query: 72 MLDIFGEAKRISSMKYVFE-LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
++ + + K+ + VF+ + GI+ +Y +M L + + A+ ++E+MK
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+P +Y + + R+ + D+Y EM RG PN T+ +++ LV++ +A
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
L+++ ++ P LI+ KAG + + I M + ++ +
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
F + E D F+ E L KK
Sbjct: 946 FGKSGEID---------FACE----------------------------LFKK------- 961
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
++ + I+ D + ++E C R D A+ FE L+ + +Y +I L
Sbjct: 962 -----MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP--EDQKCT 428
K + + EM G S +Y LI LG A + A K++ L +
Sbjct: 1017 GKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSV 1076
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
TY ALI + +G+ D+A ++K M G P+ TF L + G V +
Sbjct: 1077 FTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHN 1129
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 86/169 (50%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F+ +++ G + +Y ++D + +FE M+ G + + TY ++
Sbjct: 783 FDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHG 842
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ ++ +++ EM+ + C P +++ + L ++ + +A D+Y E++ P
Sbjct: 843 KSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPC 902
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
TY L++ L++AG+ E+A++IF +M + G P+ NILI K+GE
Sbjct: 903 TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGE 951
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +YT +++ RI FE ++ G++ D V+Y +++ L + +D A
Sbjct: 966 GIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEA 1025
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ EMK + P + +Y A + L + +V A +Y+E+ GL P+ +TY L+
Sbjct: 1026 LSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRG 1085
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+G ++A +F KM G P+ L K +AG
Sbjct: 1086 HSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 178/435 (40%), Gaps = 28/435 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTY 104
++ A+ FF+ + + + D T T++ R+ ++K V E + + + ++ +
Sbjct: 671 IDYAFWFFHQMKKF--LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFW 728
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+M + +++ A++ E + +K+L + +A +V+ + +
Sbjct: 729 GELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTK 788
Query: 165 R-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G+ P +Y LM+ L+ + E+ALE+F M+ AG P+ N+L++ K+
Sbjct: 789 NLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRIN 848
Query: 224 TIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHP-QFSPEFISDNDAV 279
+ + M+ A+ + + AL ++ L +++ FSP
Sbjct: 849 KLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSP--------- 899
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
T GPL ID LLK + ++D +S + + +I
Sbjct: 900 ---TPCTYGPL-IDG-----LLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSG 950
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
D A F+ VK + + +Y L+ L + + EE+ G
Sbjct: 951 EIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYN 1010
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRK 457
+I+ LG +RR A +FS + TY ALI AG D A+K+Y+ +
Sbjct: 1011 FIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLV 1070
Query: 458 GIHPSLGTFNVLLAG 472
G+ PS+ T+N L+ G
Sbjct: 1071 GLEPSVFTYNALIRG 1085
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 181/442 (40%), Gaps = 30/442 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +L G+ +I +F M E G + +T+ S++ LS VD A+ ++ M
Sbjct: 587 TYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRM 646
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P +++Y + L R+ A + +M ++ L P+ T L+ +VR G+
Sbjct: 647 TMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRV 705
Query: 188 EEALEIFSK-MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA----LRYP 242
E+A+++ + + +A +Q + L+E E I + N + + P
Sbjct: 706 EDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLP 765
Query: 243 VFK------EALQTFKVADENDSLLWQVHPQFSP------EFISDN---DAVEFVTTDIE 287
+ K +AL V D+ L +HP + N A+E D++
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLG-IHPTLESYNCLMDGLLGSNFTEKALELFE-DMK 823
Query: 288 GPLSIDQGLVLILL-----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
+ LL K K + + L S + + + ++ + II +
Sbjct: 824 SAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLN 883
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
AL + + D + Y LI L+K + +I EEM G + +LI
Sbjct: 884 KALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILI 943
Query: 403 HRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
+ G + A ++F + ++ + +YT L+ G D+A++ ++ + G+
Sbjct: 944 NGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD 1003
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P ++N ++ GL K R+ +A
Sbjct: 1004 PDTVSYNFIINGLGKSRRLDEA 1025
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y AL+ L + K+ ++EEM G +Y + I LG ARR A IF +
Sbjct: 237 TYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEM 296
Query: 422 PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+D+ C TYT LI +AG DKA ++Y M P T+ L ++K G+
Sbjct: 297 -DDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITL---MDKFGK 352
Query: 479 VSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
V D E ++ ++ D + D V I L GD
Sbjct: 353 VGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGD 390
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
+I L+K N K ++ E+ S LI L A R A KIF + D
Sbjct: 872 IISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEML-DY 930
Query: 426 KC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
C + Y LI + +G D A +++K M ++GI P L ++ +L+ L GR+ +A
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990
Query: 483 EIYRKEKK 490
Y +E K
Sbjct: 991 VQYFEELK 998
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y LI L K + ++++ MT G ++ +I L ARR A ++ +
Sbjct: 377 TYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENM 436
Query: 422 PE-DQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
K TA +Y I Y +G KA+ ++TM ++GI PS+ N L L + GR+
Sbjct: 437 ESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRI 496
Query: 480 SDAE 483
S+AE
Sbjct: 497 SEAE 500
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 44/82 (53%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++RG + D +TY ++ G A ++ ++E +Q G+ TY +++ S +G+
Sbjct: 1033 KNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNK 1092
Query: 118 DGAVNIWEEMKLKECYPTIVSY 139
D A +++++M + C P ++
Sbjct: 1093 DQAFSVFKKMMVVGCSPNTETF 1114
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 184/441 (41%), Gaps = 20/441 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ ++ A ++ + E M G+ D T+T++M GD+DGA
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI-QRGLPPNCYTYTVLME 179
+ I E+M C + VS + RV++A + +EM Q G P+ YT+ L+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +AG + A+EI M + G PD N +I CK GE + + L M +
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + T + EN QV + + + D+ S+ QGL L
Sbjct: 364 NTVTYNTLIST--LCKEN-----QVEEATELARVLTSKG---ILPDVCTFNSLIQGLCLT 413
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ + VA++ L + K + D + +I+ C + D AL +
Sbjct: 414 ---RNHRVAME-LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y LI K N + EI +EM G S LI L +RR A+++
Sbjct: 470 VITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMD 529
Query: 419 SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
++ E QK TY +L+ + G KA I + M G P + T+ L++GL K G
Sbjct: 530 QMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 478 RVSDAEIYRKEKKSIQADALS 498
RV E+ K +SIQ ++
Sbjct: 590 RV---EVASKLLRSIQMKGIA 607
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 189/455 (41%), Gaps = 67/455 (14%)
Query: 31 WDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
W + +VN ++ +E A F +S GF D++T+ T+++ +A +
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ ++M ++G + D TY SV+ L G+V AV ++M ++C P V+Y + L
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLC 376
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++V+EAT++ + + +G+ P+ T+ L++ L + A+E+F +M+ G +PD+
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
N+LI+ C G+ + +L+ M+ + A + + F A++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK----------- 485
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
I + + + F ++ G +N V ++L+ G+
Sbjct: 486 -----IREAEEI-FDEMEVHG-------------VSRNSVTYNTLIDGL----------- 515
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
C RR + A + + ++ Y +L+ + K A+IV+ MT
Sbjct: 516 --------CKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIF--------SLLPEDQKCTATYTALIGVYF 439
G + LI L A R A+K+ +L P Y +I F
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPH------AYNPVIQGLF 621
Query: 440 SAGSADKALKIYKTMCRKG-IHPSLGTFNVLLAGL 473
+A+ +++ M + P ++ ++ GL
Sbjct: 622 RKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGL 656
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + + TY T++D +++R+ + + M +G D TY S++ GD+
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKK 558
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +I + M C P IV+Y + L RV+ A+ + + + +G+ + Y +++
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQ 618
Query: 180 YLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKAG 220
L R K EA+ +F +M E PD + I+ C G
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG 660
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 30 KWDSYTVNQVLKTH----PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
K D +T N +L TH ++KA ++ S G D TY T++ +A R+
Sbjct: 537 KPDKFTYNSLL-THFCRGGDIKKAADIVQAMT-SNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSY-TAYM 143
+ +Q KGI + Y V+ L A+N++ EM + E P VSY +
Sbjct: 595 SKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFR 654
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK-MQEA 200
+ ++EA D E++++G P + +L E L+ E +++ + MQ+A
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 193/454 (42%), Gaps = 36/454 (7%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY ++D G+ +R+ +FE + KG + VTY +++ L G ++ A+ ++
Sbjct: 29 DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLY 88
Query: 125 EEMKLKECY-PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
++M + + PT+V+Y+ + L + V + + +EM RG PN TY L+ L+
Sbjct: 89 DDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLG 148
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL--RYMKENRLALRY 241
G+ +EA + +M G P+ ++I+ CK GE ++ +M E+ L+
Sbjct: 149 QGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDV 208
Query: 242 PVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
F L ++ D ++ + P ++ + ++ ++ +D+ L
Sbjct: 209 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSK----MAKMDEALQ 264
Query: 298 LI-----LLKKKNLVAIDSLLSGIM----------------DKSIQLDSAVISTIIEVNC 336
L+ L + N V +++ G++ D D+ +T+I+
Sbjct: 265 LLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFF 324
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+R A+ ++ + Y L L + F + EI++ M G +
Sbjct: 325 KRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI 384
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKT 453
+ ++ L A R A F + D+ Y+ALI AG D+A + +
Sbjct: 385 TYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLER 444
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYR 486
M R G P + TF++L+ GL GR+ E++R
Sbjct: 445 MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 198/491 (40%), Gaps = 64/491 (13%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A ++ ++ GF TY+T++D + + E M +G +AVTY
Sbjct: 81 IENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYN 140
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKEC--------------------------------- 132
++++ L G A ++ E+M C
Sbjct: 141 TLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMI 200
Query: 133 ----YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P ++++ + + L R+ +A +V+K ++RG PN TY+ L++ L + K +
Sbjct: 201 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 260
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFK 245
EAL++ +KM E G + + + +++ K G +++LR M++ A+ Y
Sbjct: 261 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 320
Query: 246 EALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ + E LL + + F P ++ TT G L +
Sbjct: 321 DGFFKRQRLREAVGLLREMLEAGFHPSVVT-------YTTLCHG-----------LCRSG 362
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT-AY 363
+L + + ++ S+I++ C R AL FE + ++ AY
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 422
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
ALI L K + E +E M +AG V ++LI+ L A R ++F + E
Sbjct: 423 SALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482
Query: 424 DQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+ C TY L+ A D+A +++ M G+ P T ++ GL ++ R
Sbjct: 483 -RGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDE 541
Query: 481 DAEIYRKEKKS 491
DA+ + E+ S
Sbjct: 542 DAKRIQDEENS 552
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 177/427 (41%), Gaps = 35/427 (8%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
M+D +++++ +F+ M +K I D VTY +++ L V A +++EE + K
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEM-IQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C+PT+V+Y + L R++ A +Y +M I G P TY+ L++ L R + ++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF------ 244
++ +M G P+ N L+ G ++ +L M N F
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 245 ----KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
E F+V DE ++ + SP+ I+ N ++ L
Sbjct: 181 LCKEGEIEAAFRVVDE----MFMIESGLSPDVITFNSVLDG------------------L 218
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K++ ++ ++ +++ + + ST+I+ + D AL V++
Sbjct: 219 CKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 278
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y ++ L+K+ ++ +M AG LI +R A +
Sbjct: 279 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 338
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ E TYT L +G D+A++I M +G P+ T++ ++ GL K GR
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398
Query: 479 VSDAEIY 485
V++A Y
Sbjct: 399 VTEALGY 405
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 151/361 (41%), Gaps = 25/361 (6%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D T N VL ++ N R+ RG + TY+T++D + ++ +
Sbjct: 207 DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 266
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
M E G + VTY++V+ L G ++ AV + +M+ C P V+Y + F
Sbjct: 267 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 326
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
R++EA + +EM++ G P+ TYT L L R+G+++EA+EI M G P+
Sbjct: 327 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 386
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL-----QTFKVADENDSLLWQV 264
+ +++ CKAG + M + + + + AL + K+ + + L +
Sbjct: 387 SSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMI 446
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
P+ ++ + + ID GL L G+ ++ D
Sbjct: 447 RAGRIPDVVT----FSILINGLCDAGRIDTGL--------------ELFRGMAERGCVPD 488
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+T+++ C R D A F+ L+ +R+ +I L+++N I +
Sbjct: 489 MVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQD 548
Query: 385 E 385
E
Sbjct: 549 E 549
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 118/541 (21%), Positives = 222/541 (41%), Gaps = 98/541 (18%)
Query: 24 LKNLPIKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+K + D YT N ++ + ++A F+ + ++ GF D+ T+ ++LD++G+A+
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEM-KASGFEPDKVTFNSLLDVYGKAR 292
Query: 81 R--------------------------ISS------MKYVFELMQE---KGINIDAVTYT 105
R ISS ++ L QE KG+ D VTYT
Sbjct: 293 RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYT 352
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL------------------- 146
+++ L AG +D A+ ++EM C P + +Y A +K+
Sbjct: 353 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSA 412
Query: 147 -FLNDRV---------------KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
F+ D V E + V+KEM + G P TY L+ R G ++ A
Sbjct: 413 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 472
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++I+ +M EAG+ PD + N ++ + G + M+E + L
Sbjct: 473 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
+ A D + + +SD + + IE + + LVL+ K NL +
Sbjct: 533 YANAKRLDKM----------KALSD----DIYSERIEPHNWLVKTLVLVNSKVNNLAEAE 578
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+ K LD V++ ++ + +R + +NL Y +L+ +
Sbjct: 579 KAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMY 638
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA- 429
+L K I+ E+ +G Y +I+ G + A+++FS + KC+
Sbjct: 639 SRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFS----EMKCSGL 694
Query: 430 -----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY + Y S ++A+++ + M +G P+ T+N ++ G + G+++DA+I
Sbjct: 695 KPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKI 754
Query: 485 Y 485
+
Sbjct: 755 F 755
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 166/394 (42%), Gaps = 44/394 (11%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME-YLVRAGKYEEALE 192
P +YTA + R ++A V++ M+ G+ P TY V++ Y A ++E +E
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+ + M+E GV PD+ N LI C + + + MK + F L +
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 253 VADENDSLLWQVHPQ----FSPEFISDNDAVEFVTTD--IEGPLSIDQGLVLILLKKKNL 306
A +D + + P ++ N + D +E +++ Q + + + K ++
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGM-KPDV 348
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
V +L+SG +D++ ++D+A+ V D R+G K +L Y AL
Sbjct: 349 VTYTTLISG-LDRAGKIDAAI------VEYDEMVRNGC--------KPNL----CTYNAL 389
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SL 420
I + FP++ + +E AG + L+ G + +F
Sbjct: 390 IKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 449
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+PE TY +LI Y G D A++IYK M GI+P + T+N +L+ L + GR
Sbjct: 450 IPERD----TYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 505
Query: 481 DAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
AE + A+ +D P E LL+
Sbjct: 506 QAE-------KLFAEMEERDCKPDEYSYSSLLHA 532
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 191/490 (38%), Gaps = 58/490 (11%)
Query: 35 TVNQVLKTHPPMEKAW---LFFNWVSRSRGFNHDRFTYTT-------------------- 71
T N VL + M W + + G DR+TY T
Sbjct: 209 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 268
Query: 72 ---------------MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+LD++G+A+R V + M+ G VTY S++ G
Sbjct: 269 MKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGL 328
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ AV + +EM++K P +V+YT + L ++ A Y EM++ G PN TY
Sbjct: 329 LEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNA 388
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ GK+ E + +F + + AG PD N L+ + G + + + MK+
Sbjct: 389 LIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAG 448
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ + ++ D L Q++ + + I +S +
Sbjct: 449 YIPERDTYVSLISSYSRCGLFD-LAMQIYKR-------------MMEAGIYPDVSTYNAV 494
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD--GALLAFEYSVKM 354
+ L + + L + + ++ + D S+++ + +R D AL YS ++
Sbjct: 495 LSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERI 554
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + L L+ K+N + + E+ + SL + + ++ G R
Sbjct: 555 EPHNWLVKTLVLVN--SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKV 612
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
KI SL+ E ATY +L+ +Y G +K I + G+ P ++N ++
Sbjct: 613 EKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYA 672
Query: 473 LEKLGRVSDA 482
+ G++ +A
Sbjct: 673 YGRKGQMKEA 682
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 108/294 (36%), Gaps = 58/294 (19%)
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ RAG+ EA S + +A PD A L+ +AG R + + R M ++ +
Sbjct: 151 MARAGRLAEA----SALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGV--- 203
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ A+ T+ V V +S + + VE V + E ++ D+ L
Sbjct: 204 ----QPAIVTYNV----------VLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTL 249
Query: 301 LKKKNLVAIDSLLSGIMDK----SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ A+ + + D+ + D +++++V RR D A+ + ++
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y +LI +K + + +EM G
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG-------------------------- 343
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+ P+ TYT LI AG D A+ Y M R G P+L T+N L+
Sbjct: 344 ---MKPD----VVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALI 390
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 187/428 (43%), Gaps = 22/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF T+ T+++ RI + + +G T+T +++ L G A
Sbjct: 169 GFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAA 228
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++M +C P +VSY+ + L N V EA D++ M G+ P TY L+
Sbjct: 229 IVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYG 288
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ +G++++A +F +M E ++PD +IL++ CK G + + M + +A+
Sbjct: 289 MCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQ--IAME 346
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + V S LW+ E +S N + VT I V +
Sbjct: 347 PDIVTYSSLIHGVC---KSSLWKESSTLLNEMLSRNIRPDVVTFSI---------WVDVF 394
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
KK + S+++ ++++ ++ + +++++ C H + D A F+ V +
Sbjct: 395 CKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDV 454
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+Y LI K + ++ +EM+ G + LI L A RP A ++F
Sbjct: 455 LSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKK 514
Query: 421 L-----PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ P D TY+ L+ + G D+AL +++ + + + P+ +LL G+ K
Sbjct: 515 MGSHGCPPD---LITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCK 571
Query: 476 LGRVSDAE 483
G++ DA+
Sbjct: 572 AGKLEDAK 579
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SR D T++ +D+F + +S + + LM E+G+ + VTY S+M +D
Sbjct: 377 SRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMD 436
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ M K C P ++SY +K ++R+ EA ++ EM +GL PN T+T L+
Sbjct: 437 EARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLI 496
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L +AG+ A E+F KM G PD + L+ CK G + + +K+++L
Sbjct: 497 SGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLK 556
Query: 239 LRYPVFK 245
+ + K
Sbjct: 557 PNHVICK 563
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 85/162 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY +++D + ++ + VF++M KG D ++Y ++ + +D
Sbjct: 413 RGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDE 472
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++EM K P +++T + L R A +++K+M G PP+ TY+ L+
Sbjct: 473 AKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLS 532
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ G +EAL +F ++++ ++P+ C IL+ CKAG+
Sbjct: 533 GFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGK 574
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H M++A F+ + ++G D +Y ++ + +++RI K +F+ M KG+ +++
Sbjct: 432 HSQMDEARKVFD-IMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSI 490
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
T+T+++ L AG A ++++M C P +++Y+ + + + EA +++ +
Sbjct: 491 THTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEAL 550
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ L PN +L+ + +AGK E+A E+FS + +QPD
Sbjct: 551 KKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 143/359 (39%), Gaps = 24/359 (6%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S ++ + K E LF++ RS G + TY +++ + + +F+ M
Sbjct: 248 SIIIDSLCKNRLVNEAVDLFYHM--RSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEM 305
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
E + D VT++ ++ L G V A++++ +M P IV+Y++ + + +
Sbjct: 306 LEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLW 365
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
KE++ + EM+ R + P+ T+++ ++ + G EA I + M E G++P+ N L
Sbjct: 366 KESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSL 425
Query: 213 IEKCC---KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV-HPQF 268
++ C + E R + I+ L Y + + + DE L ++ H
Sbjct: 426 MDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGL 485
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
+P I+ TT I G L + A L + D
Sbjct: 486 TPNSITH-------TTLISG-----------LCQAGRPYAAKELFKKMGSHGCPPDLITY 527
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
ST++ C H D AL FE K L L+G + K E+ ++
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLS 586
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/372 (18%), Positives = 148/372 (39%), Gaps = 24/372 (6%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D V+I+ +M+ ++ + T + L V V ++ + G P+ T+ L
Sbjct: 121 DSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTL 180
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--- 234
+ L G+ EA+E + G QP +++ CK G+T I+ ++ M E
Sbjct: 181 INGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDC 240
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSID 293
+ Y + ++L ++ +E L + + SP ++ N
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNS---------------- 284
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L+ + L +++ +++ D S +++ C AL F ++
Sbjct: 285 --LIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQ 342
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ + + Y +LI + K + + + + ++ EM V ++ +
Sbjct: 343 IAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSE 402
Query: 414 AAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
A I +L+ E + TY +L+ Y D+A K++ M KG P + ++N+L+
Sbjct: 403 AQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIK 462
Query: 472 GLEKLGRVSDAE 483
G K R+ +A+
Sbjct: 463 GYCKSERIDEAK 474
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 185/436 (42%), Gaps = 26/436 (5%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAK---RISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
+++S GF +Y ++LD ++ ++S+ + E+++ + ++ + TY ++
Sbjct: 167 LAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSR-VSPNVYTYNILIRGFC 225
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ G++ + + EM+ C P +V+Y + R+ EA + K M +G+ PN
Sbjct: 226 SVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLI 285
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+Y V++ L R G +EA EI +M G PD+ N L+ CK G ++I M
Sbjct: 286 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 345
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
N ++ + + + A N + + Q + N+ TT I+G
Sbjct: 346 VRNGVSPSVVTYTALINSMCKA-RNLNRAMEFFDQMRIRGLRPNERT--YTTLIDG--FS 400
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
QGL L +L+ + + + I +C R + AL + V
Sbjct: 401 RQGL---------LNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ L + +Y +I + + ++ +EM + G S + LI L RR
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511
Query: 413 PAAKIFSL-----LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A + LP D+ TYT LI Y G +KAL ++ M KG P T++
Sbjct: 512 EACDLSQEMLDMGLPPDE---FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYS 568
Query: 468 VLLAGLEKLGRVSDAE 483
VL+ GL K R +A+
Sbjct: 569 VLINGLNKQARTREAK 584
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF------GEAKRI-----------SSMKY- 87
+ +A FF+ + R RG + TYTT++D F EA RI S + Y
Sbjct: 370 LNRAMEFFDQM-RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYN 428
Query: 88 -----------------VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
V + M EKG+ D V+Y++++ G++D A + +EM K
Sbjct: 429 AFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 488
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P V+Y++ ++ L R+ EA D+ +EM+ GLPP+ +TYT L+ G +A
Sbjct: 489 GVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKA 548
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
L + +M G PD ++LI K TR
Sbjct: 549 LHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 581
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 177/432 (40%), Gaps = 23/432 (5%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+D + I + + +FE M+ +G+ D VTY S++ G +D V +EE
Sbjct: 134 FTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P +++Y + + + ++ + + Y+EM Q GL PN +Y+ L++ +
Sbjct: 194 MKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDM 253
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPV 243
++A++ + M+ G P++ L++ CK G + M E + + Y
Sbjct: 254 MQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTA 313
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ L + E + L ++ VT + L+ L+ +K
Sbjct: 314 LIDGLCDAERMKEAEKLFGKM-----------------VTAGVIPNLASYNALIHGFVKA 356
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
KN+ LL+ + + IQ D + T I C + + A + + + Y
Sbjct: 357 KNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIY 416
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
L+ K + ++EEM + H + V +LI L + A F +
Sbjct: 417 TTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSN 476
Query: 424 D---QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
D Q A YTA+I A +++ M ++G+ P + L+ G K G +
Sbjct: 477 DFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNML 536
Query: 481 DAEIYRKEKKSI 492
+A R + I
Sbjct: 537 EALALRDKMAEI 548
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 159/395 (40%), Gaps = 65/395 (16%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY +M+D +G+ R+ Y FE M+ D +TY S+++ +G +
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPK 221
Query: 120 AVNIWEEMKLKECYPTIVSYTA--------------------------------YMKILF 147
+ + EMK P +VSY+ Y ++
Sbjct: 222 GLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVD 281
Query: 148 LNDRVKEATDVYK---EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
N ++ +D ++ EM++ G+ N TYT L++ L A + +EA ++F KM AGV P
Sbjct: 282 ANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIP 341
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVF------KEALQTFKVA- 254
+ A+ N LI KA + +L +K + L Y F E ++ KV
Sbjct: 342 NLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVM 401
Query: 255 ---DEN-------------DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
EN D+ +P + + ++ T + + ID GL
Sbjct: 402 NEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLID-GLCK 460
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L K AID D +Q ++AV + +I+ C + A FE + L
Sbjct: 461 NKLVSK---AIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVP 517
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
+RTAY +L+ +K + + ++M + G L
Sbjct: 518 DRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKL 552
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 157/380 (41%), Gaps = 16/380 (4%)
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++H + G DG +++M PT+ +Y + ++ ++ A +++EM
Sbjct: 102 NGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKF 161
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
RGL P+ TY +++ + G+ ++ + F +M+ +PD N LI CK+G+
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPK 221
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
+ R MK++ L + + F D ++ Q + +F D V V
Sbjct: 222 GLEFYREMKQSGLKPNVVSYSTLVDAFCKED----MMQQ-----AIKFYVDMRRVGHVPN 272
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ +D K NL L + +++ ++ + + +I+ CD R A
Sbjct: 273 EFTYTSLVDAN-----CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEA 327
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F V + +Y ALI +K + E++ E+ G + L I
Sbjct: 328 EKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWG 387
Query: 405 LGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L + A + + + E+ + T YT L+ YF +G+ + L + + M +
Sbjct: 388 LCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVT 447
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
+ TF VL+ GL K VS A
Sbjct: 448 VVTFCVLIDGLCKNKLVSKA 467
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 138/365 (37%), Gaps = 49/365 (13%)
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C P + A +L ++EAT + +M + + P + L+ + GK +
Sbjct: 59 CVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 118
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
F M AG +P NI+I+ K G+ + MK L + + +
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY 178
Query: 252 -KVADENDSL-LWQVHPQFS--PEFISDNDAVEFVTTDIEGPLSID-------QGLVLIL 300
KV +D++ ++ S P+ I+ N + + P ++ GL
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGL---- 234
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K N+V+ +L+ + + + I+ D RR F Y+ +D N
Sbjct: 235 --KPNVVSYSTLVDAFCKEDM------MQQAIKFYVDMRRVGHVPNEFTYTSLVDAN--- 283
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-- 418
K+ + EM + G V LI L A R A K+F
Sbjct: 284 ----------CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGK 333
Query: 419 ----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL---GTFNVLLA 471
++P A+Y ALI + A + D+AL++ + +GI P L GTF L
Sbjct: 334 MVTAGVIPN----LASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLC 389
Query: 472 GLEKL 476
GLEK+
Sbjct: 390 GLEKI 394
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 118/338 (34%), Gaps = 61/338 (18%)
Query: 154 EATDVYKEM--IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
E DV+ E+ + P + L L+ G EEA + FSKM+ V P +CN
Sbjct: 44 EECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNG 103
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L+ K K G+T + +F +
Sbjct: 104 LLHKFAKLGKTDGV----------------------------------------KRFFKD 123
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
I T +I ++ + K+ ++ A L + + + D+ +++
Sbjct: 124 MIGAGSKPTVFTYNI---------MIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSM 174
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ R D + FE M + Y +LI K PK E EM ++G
Sbjct: 175 IDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGL 234
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSAD 445
V + L+ A K + +P + TYT+L+ G+
Sbjct: 235 KPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNE----FTYTSLVDANCKIGNLS 290
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
A ++ M G+ ++ T+ L+ GL R+ +AE
Sbjct: 291 DAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAE 328
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 68 TYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+ ++D + K +S ++ Y + + G+ +A YT+++ L V A ++E+
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQ 509
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + P +YT+ M + EA + +M + G+ + YT L+ + +
Sbjct: 510 MAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQ 569
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++A +M + PD+ C +++K + G + + Y+ +++L
Sbjct: 570 LQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQL 620
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 61/125 (48%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA +F +S G + YT M+D + ++ + +FE M ++G+ D YT
Sbjct: 464 VSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYT 523
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+M G++ A+ + ++M +++YT+ + +++++A +EMI
Sbjct: 524 SLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGE 583
Query: 166 GLPPN 170
+ P+
Sbjct: 584 EILPD 588
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 195/448 (43%), Gaps = 53/448 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW FF+ + +++G D +YT+M+ + +A R+ + +F M+ + A Y
Sbjct: 265 VDMAWKFFHEL-KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYN 323
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +AG + A + E ++ + C P++VS+ + + L +V EA ++ E++++
Sbjct: 324 TMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKK 382
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN TY ++++ L G+ EEA I +M+ A + P+ NI++++ CKA
Sbjct: 383 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA------ 436
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+L Y +F+ A Q + D V + +
Sbjct: 437 ---------RKLEEAYKIFESASQRG----------------------CNPDCVTYCSL- 464
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I+G L KK + L ++D + V +++I H R++
Sbjct: 465 IDG-----------LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 513
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ ++ + T + + K K I E++ G V ++LIH L
Sbjct: 514 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 573
Query: 406 GSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A + + IF + + Y A++ + +G KA +I + M K + P++
Sbjct: 574 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 633
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
T+ ++ GL K+ R+ +A + +E KS
Sbjct: 634 ATYGAIVDGLAKIDRLDEAYMLFEEAKS 661
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 177/439 (40%), Gaps = 52/439 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+ F S+ RG N D TY +++D G+ ++ +FE M + G N + V YT
Sbjct: 439 LEEAYKIFESASQ-RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 497
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ G + I++E+ + C P + YM +F V++ +++++
Sbjct: 498 SLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSY 557
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ +Y++L+ L +AG+ E IF M++ G D A N +++ CK+G+
Sbjct: 558 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 617
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
IL MKE + + + D D + + + + I N + D
Sbjct: 618 YEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE-AYMLFEEAKSKGIELNVVLYSSLID 676
Query: 286 IEGPLS-IDQG-LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
G + ID+ L+L + KK L + ++D ++ + E+N
Sbjct: 677 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAE--------EIN-------E 721
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
AL+ F+ +M Y LI L ++ + K ++M K G
Sbjct: 722 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG------------- 768
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
L+P TYT +I G+ A +++ G P
Sbjct: 769 ----------------LVPN----VVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDA 808
Query: 464 GTFNVLLAGLEKLGRVSDA 482
+FN L+ G+ R +A
Sbjct: 809 ASFNALIEGMSNANRAMEA 827
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 180/455 (39%), Gaps = 27/455 (5%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V R F YT ++ EA+R + MQE G + +T+++ L+ G
Sbjct: 169 VMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREG 228
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
V A+ + +E+K P IV Y + V A + E+ +GL P+ +YT
Sbjct: 229 QVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYT 288
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++ L +AG+ EA E+F++M+ P A N +I AG +L ++E
Sbjct: 289 SMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 348
Query: 236 RLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
F L + DE SL E + D E S
Sbjct: 349 GCIPSVVSFNSILTCLGKKRKVDEALSLF------------------EVMKKDAEPNSST 390
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
++ +L + +L + S+ + ++ +++ C R+ + A FE +
Sbjct: 391 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 450
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ N + Y +LI L K + + E+M AGH+ + LI R
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 510
Query: 413 PAAKIFSLLPEDQKCTATYTAL---IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
KIF L + C T L + F AG +K I++ + G P + ++++L
Sbjct: 511 DGHKIFKELIR-RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 569
Query: 470 LAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
+ GL K G+ + + +++ DA + +AV
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAV 604
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 8/200 (4%)
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
PL D ++ +L A++ +L + L + + + RR D A+LA
Sbjct: 108 PLPADAYHAVLPFLHHDLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAV 167
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
++ +AY LIG L + + E++ +M + G+ +GV+L L+ L
Sbjct: 168 AVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALA-- 225
Query: 409 RRPVPAAKIFSLLPEDQ-KC----TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
R A +L+ E + C Y I + AG+ D A K + + +G+ P
Sbjct: 226 -REGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDD 284
Query: 464 GTFNVLLAGLEKLGRVSDAE 483
++ ++ L K GR+ +AE
Sbjct: 285 VSYTSMIWVLCKAGRLGEAE 304
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 71/135 (52%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ +TY+ +++ ++ + ++ MQ++G+ + VTYT+++ L+ G++ A +++
Sbjct: 737 NTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 796
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E K P S+ A ++ + +R EA V++E RG N + L++ L ++
Sbjct: 797 ERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKS 856
Query: 185 GKYEEALEIFSKMQE 199
E+A + + ++E
Sbjct: 857 ECLEQAAIVGAVLRE 871
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 180/437 (41%), Gaps = 26/437 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G+ T++ +L KR S +M M G +A +Y ++ L +
Sbjct: 126 GWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQ 185
Query: 120 AVNIWEEMKLKE----CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
A+++ M + C P +VSYT + L ++ +A ++ EM+ +G+ PNC TY
Sbjct: 186 ALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYN 245
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ +GK +EA+ IF KM GV+PD N L+ CK G + + M +
Sbjct: 246 CLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKK 305
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
++ L + + L Q+H + ++
Sbjct: 306 GHKPDSSIYGTLLHGYAT----EGYLVQMHQLLDVMVRNGTQPDHYIFN----------- 350
Query: 296 LVLILLKKKNLVAIDSLL--SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
+LI K+ + +++L S + + + + T+++ C + D A+ F+ +
Sbjct: 351 -ILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLIS 409
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
L + LI L + + K E+ EM G L++ L
Sbjct: 410 EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTR 469
Query: 414 AAKIFSLLPE-DQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
A IF L+ D +C TYT LI Y G D+A K+ + M G+ P+ T+N ++
Sbjct: 470 AKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIIN 529
Query: 472 GLEKLGRVSDA-EIYRK 487
G K GR+ DA ++R+
Sbjct: 530 GYCKNGRIEDACSLFRQ 546
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 187/470 (39%), Gaps = 38/470 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +YTT+++ ++ +F+ M ++G++ + +TY ++H ++G A
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEA 260
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I+ +M P +V+Y M L N R EA V+ M+++G P+ Y L+
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
G + ++ M G QPD NILI K G +L M++ L
Sbjct: 321 YATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPN 380
Query: 239 -LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFI-----------------SDNDAV 279
+ Y +AL + KV D + +P + ++ AV
Sbjct: 381 IVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAV 440
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK-SIQLDSAVISTIIEVNCDH 338
E + I P +I +L L K+ +V + +M + +Q D +T+I+ C
Sbjct: 441 EMIGRGI-CPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLD 499
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ D A E V + Y +I K + +M G + G+ +
Sbjct: 500 GKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIY 559
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALKIYKT 453
+ ++H L RR A +++ + KC TY ++ D AL+++
Sbjct: 560 STILHGLFQTRRIAAAKELYLWMI---KCGIKLPIGTYNIILQGLCQNNCTDDALRMFHN 616
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
+C H TFN+++ L K GR E K + A L++ VP
Sbjct: 617 LCLIDFHLQNRTFNIMIDALLKGGR-------HDEAKDLFASLLARGLVP 659
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 7/228 (3%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A LL+ + +K + T N ++ + +E A F ++ S+G N Y+T
Sbjct: 503 DEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMA-SKGVNPGIVIYST 561
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + +RI++ K ++ M + GI + TY ++ L D A+ ++ + L +
Sbjct: 562 ILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLID 621
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+ ++ + L R EA D++ ++ RGL PN TY ++M+ L+ G EE
Sbjct: 622 FHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELD 681
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++F +++ G D N L+ K + GE R + L + EN +L
Sbjct: 682 DLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSL 729
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 8/240 (3%)
Query: 32 DSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D Y N ++ H +++A L F+ + R +G + + TY T++D ++
Sbjct: 345 DHYIFNILIGAYAKHGMVDEAMLAFSKM-RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQ 403
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ + +G+ + V + +++H L D A + EM + P + + + L
Sbjct: 404 FDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCK 463
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
V A +++ M++ + + TYT L++ GK +EA ++ M GV+P++
Sbjct: 464 EGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVT 523
Query: 209 CNILIEKCCKAGETRTIILILRYMKEN----RLALRYPVFKEALQTFKVADENDSLLWQV 264
N +I CK G + R M + + + QT ++A + LW +
Sbjct: 524 YNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMI 583
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG + + T+L+ + ++ K +F+LM + D +TYT+++ G VD
Sbjct: 444 GRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVD 503
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + E M L P V+Y + N R+++A ++++M +G+ P Y+ ++
Sbjct: 504 EATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTIL 563
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
L + + A E++ M + G++ NI+++ C+
Sbjct: 564 HGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQ 603
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 146/369 (39%), Gaps = 27/369 (7%)
Query: 29 IKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
++ D T N ++ K ME +F + V + G D Y T+L + +
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKK--GHKPDSSIYGTLLHGYATEGYLVQ 329
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
M + ++M G D + ++ + G VD A+ + +M+ + +P IV+Y M
Sbjct: 330 MHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMD 389
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L +V +A + +I GL PN + L+ L K+++A E+ +M G+ P
Sbjct: 390 ALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449
Query: 205 DKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ N L+ CK G + I ++ + + Y + DE LL
Sbjct: 450 NTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLL 509
Query: 262 -WQVHPQFSPEFISDNDAVEFVTTD--IEGPLS---------IDQGLVLI------LLKK 303
V P ++ N + + IE S ++ G+V+ L +
Sbjct: 510 EGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQT 569
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+ + A L ++ I+L + I++ C + D AL F +D +L+ +
Sbjct: 570 RRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTF 629
Query: 364 LALIGILIK 372
+I L+K
Sbjct: 630 NIMIDALLK 638
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 179/428 (41%), Gaps = 24/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + T++T+L+ +I +F+ M + G D +TY+++++ L G A
Sbjct: 42 GLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMA 101
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++M+ K C P +V Y+ + L + + EA + EM+ RG+ PN TY+ ++
Sbjct: 102 IQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHG 161
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
G+ EA +F +M E V PD NIL++ K G + M E +
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221
Query: 241 YPVFKEALQTF---KVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ + + DE L V +P S N L
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNI------------------L 263
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ K + LL+ + K++ D+ ST+++ C R A E L
Sbjct: 264 IKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGL 323
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y ++ L K + E+++ M ++ +++ +LI + + + A +
Sbjct: 324 LPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARE 383
Query: 417 IFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+FS + Q TYT +I G +++A ++++ M G P+ T+NV++ G
Sbjct: 384 LFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFL 443
Query: 475 KLGRVSDA 482
+ G S+A
Sbjct: 444 RNGDTSNA 451
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + Y+T++D + K I+ M +GI+ + VTY+S++H N G +
Sbjct: 111 KGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNE 170
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++++M + P V++ + L + EA V++ MI++G+ PN TY LM+
Sbjct: 171 ATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMD 230
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ +EA ++F+ M G P + NILI+ CK+G
Sbjct: 231 GYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSG 271
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 42 THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDA 101
+ M++A FN + R +G +Y ++ ++ RI K + M K + D
Sbjct: 234 SQSQMDEAQKLFNIMVR-KGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
VTY+++M G A + EEM+ P +++Y+ + L + EA ++ K
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M + + PN + YT+L++ + GK E A E+FS + G+QPD ++I K G
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412
Query: 222 TRTIILILRYM 232
+ + R M
Sbjct: 413 SNEACELFRDM 423
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 88/175 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + + TY+++L F R + +F+ M E+ + D VT+ ++ LS G +
Sbjct: 145 NRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMIL 204
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++E M K P + +Y A M ++ EA ++ M+++G P+ +Y +L+
Sbjct: 205 EAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILI 264
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ ++G+ +EA + ++M + PD + L++ C+ G + +L M+
Sbjct: 265 KGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS G D TY+ +LD + + + + MQE I + YT ++ + N G +
Sbjct: 319 RSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKL 378
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++ + +K P +V+YT + L EA +++++M G PN TY V+
Sbjct: 379 EAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVI 438
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++ +R G A + +M G D + +L
Sbjct: 439 IQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 136/346 (39%), Gaps = 53/346 (15%)
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+D A V M + GL PN T++ L+ L K +A+++F +M + G +PD
Sbjct: 25 HDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVIT 84
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
+ +I CK G T I +L+ M+E V+ + + D L+ +
Sbjct: 85 YSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLC----KDKLITE----- 135
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
A+EF LS ++++ I +
Sbjct: 136 ---------AMEF-------------------------------LSEMVNRGISPNVVTY 155
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
S+I+ C+ R + A F+ V+ ++ + + L+ L K + + E M +
Sbjct: 156 SSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIE 215
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSAD 445
G V L+ S + A K+F+++ + C + Y LI + +G D
Sbjct: 216 KGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR-KGCAPSVRSYNILIKGHCKSGRID 274
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+A + M K + P T++ L+ G + GR DA+ +E +S
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRS 320
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 5/193 (2%)
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
LL + +K + + V STII+ C + A+ V ++ Y +++
Sbjct: 104 LLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFC 163
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTA 429
L + + ++M + +L+ L + A +F + E +
Sbjct: 164 NLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVN 223
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
TY AL+ Y S D+A K++ M RKG PS+ ++N+L+ G K GR+ +A+ E
Sbjct: 224 TYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE- 282
Query: 490 KSIQADALSKDAV 502
+ AL+ D V
Sbjct: 283 --MSHKALTPDTV 293
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 201/466 (43%), Gaps = 46/466 (9%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK-YVFELMQ 93
TV Q L+ FF+WV ++GF+H ++ ML+ G A+ +++ + ++F + +
Sbjct: 73 TVLQTLRLIKVPADGLRFFDWVY-NKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEK 131
Query: 94 EKG--INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ + + S++ NAG +VN+++ MK P+++++ + + IL R
Sbjct: 132 RSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGR 191
Query: 152 VKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
A D++ EM + G+ P+ YT+ L+ + ++A IF +M+ PD N
Sbjct: 192 TGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYN 251
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPV--FKEALQTFKVADENDSLLWQVHPQF 268
+I+ C+AG+ + +L M + A+ + + L+ + + E D L H
Sbjct: 252 TIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEML 311
Query: 269 S----PEFISDNDAVEFVTT-----DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ P ++ N ++ ++ +I+G L+ G
Sbjct: 312 TRGLKPNAVTYNTLIKGLSEAHRYDEIKG----------------------FLIGGDAFT 349
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ D+ + +I+ +CD D A+ F+ + M L+ + +Y LI L N F K
Sbjct: 350 TFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKA 409
Query: 380 AEIVEEMTKAGHSLGVY----LGA---LLIHRLGSARRPVPAAKIF-SLLPEDQKCTATY 431
+ E+ + LG L A L+ L + + A K+F L+ + ++Y
Sbjct: 410 ETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPSSY 469
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
LI G A ++ M R+ P T+ VL+ GL K+G
Sbjct: 470 RTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIG 515
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 137/334 (41%), Gaps = 26/334 (7%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F+ D T+ ++ +A + + VF+ M ++ D+ +Y+ ++ L + D A
Sbjct: 351 FSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAE 410
Query: 122 NIWEEMKLKE-------CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
++ E+ KE C P +Y + L N + K+A V++++++RG + +Y
Sbjct: 411 TLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRG-AQDPSSY 469
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ L R GK++ A E+ M PD +LI+ K GE L+ M
Sbjct: 470 RTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLR 529
Query: 235 NRLALRYPVFKEAL-QTFKVADENDS---LLWQVHPQFSPEFISDNDAVEFVTTDIEGP- 289
+ F L + K NDS L + + AV V + +
Sbjct: 530 SSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEK 589
Query: 290 ------LSIDQGLVL-------ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
L D G ++ L + + L+ +L+ ++KS +D +TIIE C
Sbjct: 590 AFLIVRLLYDNGYLIKMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLC 649
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
H+R A + V++ + + + ++ L L
Sbjct: 650 KHKRHSEAFSLYNELVELGNHQQLSCHVVLTNAL 683
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 400 LLIHRLGSARRPVPAAK--IFSLLPEDQKCTAT----YTALIGVYFSAGSADKALKIYKT 453
L++ LG AR + AA+ +FS+ C + +LI Y +AG +++ +++T
Sbjct: 108 LMLEFLGRARN-LNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQT 166
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
M + GI PS+ TFN LL+ L K GR A
Sbjct: 167 MKKMGISPSVLTFNSLLSILLKRGRTGMAH 196
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/502 (23%), Positives = 199/502 (39%), Gaps = 61/502 (12%)
Query: 8 VYKILKYSTWDSAQDLL---------KNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR 58
V ++LK + WD + LL KN P+ + ++ + +E + F W+
Sbjct: 101 VERLLKLNHWDDVEGLLNRWVGRFSRKNFPL-----LIREITQIGS-LEHSVQVFRWMKN 154
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ + Y M+ + + + +F MQ+ DA TY ++++ AG
Sbjct: 155 QKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWR 214
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+NI ++M P+ +Y + + KEA +V K+M + G+ P+ T+ +++
Sbjct: 215 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVL 274
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
R +Y + L F M+ ++PD NI+I K G+ I I MKE R
Sbjct: 275 SAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSE 334
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
YP + TF S+ Q+ +N F T EG
Sbjct: 335 C-YP----DVVTFTTIIHLYSVCGQI----------ENCQTAFNTMLAEG---------- 369
Query: 299 ILLKKKNLVAIDSLL----SGIMDK------------SIQLDSAVISTIIEVNCDHRRRD 342
K N+V+ ++L+ S MDK D ++++ + +
Sbjct: 370 ---LKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPE 426
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A+ FE + +Y ALI + EI+ EM + G + L+
Sbjct: 427 KAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLL 486
Query: 403 HRLGSARRPVPAAKIFSL--LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
G + V + S L + T Y + IG Y S G DKAL +Y+ M K +
Sbjct: 487 AACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVK 546
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P T+NVL++G K+ + +A
Sbjct: 547 PDPVTYNVLISGCCKMSKYGEA 568
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + T+L G + +K V + +GI ++ Y S + + G+ D A
Sbjct: 474 GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKA 533
Query: 121 VNIWEEMKLKECYPTIVSY----------TAYMKIL-FLND------------------- 150
++++ M+ K+ P V+Y + Y + L FL++
Sbjct: 534 LSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICA 593
Query: 151 -----RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+V EA ++ +M G P+ TYT ++ A +E+A +F +M+ VQPD
Sbjct: 594 YSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPD 653
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
AC+ L+ K G+ ++++ +M+E ++ F E
Sbjct: 654 SIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFE 694
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++++ F + + + + + E M+EK I + ++ ++ S + W
Sbjct: 653 DSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACS-------LLREW 705
Query: 125 EEM----KLKECYPTIVSYTAYMKILFL---NDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
E+ KL E ++VS ++L + +++ ++ +++ G N YTY++L
Sbjct: 706 REIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSIL 765
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPD 205
++ L+ AG + + +E+ M+EAG+QP
Sbjct: 766 LKNLLAAGNWRKYIEVLQWMEEAGLQPS 793
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/502 (23%), Positives = 199/502 (39%), Gaps = 61/502 (12%)
Query: 8 VYKILKYSTWDSAQDLL---------KNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR 58
V ++LK + WD + LL KN P+ + ++ + +E + F W+
Sbjct: 101 VERLLKLNHWDDVEGLLNRWVGRFSRKNFPL-----LIREITQIGS-LEHSVQVFRWMKN 154
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ + Y M+ + + + +F MQ+ DA TY ++++ AG
Sbjct: 155 QKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRAGQWR 214
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+NI ++M P+ +Y + + KEA +V K+M + G+ P+ T+ +++
Sbjct: 215 WAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVL 274
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
R +Y + L F M+ ++PD NI+I K G+ I I MKE R
Sbjct: 275 SAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSE 334
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
YP + TF S+ Q+ +N F T EG
Sbjct: 335 C-YP----DVVTFTTIIHLYSVCGQI----------ENCQTAFNTMLAEG---------- 369
Query: 299 ILLKKKNLVAIDSLL----SGIMDK------------SIQLDSAVISTIIEVNCDHRRRD 342
K N+V+ ++L+ S MDK D ++++ + +
Sbjct: 370 ---LKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPE 426
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A+ FE + +Y ALI + EI+ EM + G + L+
Sbjct: 427 KAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLL 486
Query: 403 HRLGSARRPVPAAKIFSL--LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
G + V + S L + T Y + IG Y S G DKAL +Y+ M K +
Sbjct: 487 AACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVK 546
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P T+NVL++G K+ + +A
Sbjct: 547 PDPVTYNVLISGCCKMSKYGEA 568
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + T+L G + +K V + +GI ++ Y S + + G+ D A
Sbjct: 474 GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKA 533
Query: 121 VNIWEEMKLKECYPTIVSY----------TAYMKIL-FLND------------------- 150
++++ M+ K+ P V+Y + Y + L FL++
Sbjct: 534 LSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICA 593
Query: 151 -----RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+V EA ++ +M G P+ TYT ++ A +E+A +F +M+ VQPD
Sbjct: 594 YSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPD 653
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
AC+ L+ K G+ ++++ +M+E ++ F E
Sbjct: 654 SIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFE 694
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++++ F + + + + + E M+EK I + ++ ++ S + W
Sbjct: 653 DSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACS-------LLREW 705
Query: 125 EEM----KLKECYPTIVSYTAYMKILFL---NDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
E+ KL E ++VS ++L + +++ ++ +++ G N YTY++L
Sbjct: 706 REIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSIL 765
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPD 205
++ L+ AG + + +E+ M+EAG+QP
Sbjct: 766 LKNLLAAGNWRKYIEVLQWMEEAGLQPS 793
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 198/474 (41%), Gaps = 56/474 (11%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
D T+ L + E A +F + + + GF D T++L F + VF++
Sbjct: 197 DYRTIVNALCKNGYTEAAEMFMSKILKI-GFVLDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 92 M-QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M +E ++V+Y+ ++H L G ++ A + ++M K C P+ +YT +K L
Sbjct: 256 MSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+ +A +++ EMI RG PN +TYTVL++ L R GK EEA + KM + + P N
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDS---LLWQVHP 266
LI CK G +L M++ F E ++ +V + L +
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 267 QFSPEFISDNDAVEFVTT-----------------DIEGPLSIDQGLVLILLKKKNLVAI 309
SP+ +S N ++ + DIE ++ K+
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+ L ++ K I LD +T+I+ C + AL E VKM + L L +I
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI-LTTPHSLNVI-- 552
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
L+ K ++ EE+ G I++LG L+P
Sbjct: 553 ---LDMLSKGCKVKEELAMLGK----------INKLG-------------LVPS----VV 582
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TYT L+ +G + +I + M G P++ + +++ GL + GRV +AE
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 134/322 (41%), Gaps = 52/322 (16%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+T +++ F + + LM KGI++D VT T+++ + G A+ I
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 125 EEM-----------------------KLKE------------CYPTIVSYTAYMKILFLN 149
E + K+KE P++V+YT + L +
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ + + + M G PN Y YT+++ L + G+ EEA ++ S MQ++GV P+
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE----------NDS 259
++++ G+ + +R M E L ++ LQ F ++ + +D
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDI 714
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
L + P+ E IS VE + I G LV L K+ + L+ ++++
Sbjct: 715 ALRETDPECINELIS---VVEQLGGCISGLCIF---LVTRLCKEGRTDESNDLVQNVLER 768
Query: 320 SIQLDSAVISTIIEVNCDHRRR 341
+ L+ A + I+E C ++
Sbjct: 769 GVFLEKA-MDIIMESYCSKKKH 789
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 184/428 (42%), Gaps = 54/428 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF D T+ ++++ +A+ + + + + M + G+ + VTYTS++H S G +
Sbjct: 145 QGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEE 204
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM + P IVS+ ++M L + R KEA +++ M +G PN TY +L+
Sbjct: 205 ATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLH 264
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
G + + + F+ M+ G+ + ILI+ K G +LIL M+ L+
Sbjct: 265 GYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSP 324
Query: 239 --LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y AL + ++AD D + P + + ++ T +
Sbjct: 325 DVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGD-------- 376
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+K K LV + + +GI +I ++++ +I C R A F+ +
Sbjct: 377 ----LVKAKELV-YEMMNNGIPRPNIAFFNSIVHSI----CKEGRVMDAHHIFDLVKDIG 427
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
ER+ +I NT +V EM KA L + A
Sbjct: 428 ---ERSD-------IIMFNTLIDGYCLVGEMGKAFSVLDAMISA---------------- 461
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ P+ T TY L+ YF +G D L +++ M K I P+ T+N++L GL +
Sbjct: 462 ---GIGPD----TFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFR 514
Query: 476 LGRVSDAE 483
GR A+
Sbjct: 515 AGRTVAAQ 522
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 180/478 (37%), Gaps = 62/478 (12%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW-E 125
FTY +++ A+R F + G+ D +V+ L D AV +
Sbjct: 9 FTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLR 68
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI-QRGL-PPNCYTYTVLMEYLVR 183
M C P SY +K L ++R ++A D+ + M + G+ P+ TY ++ +
Sbjct: 69 RMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFK 128
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LR 240
GK +A ++ +M + G PD N +I CKA L+LR M +N + +
Sbjct: 129 EGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVT 188
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDN-------------DAVE-FVTTD 285
Y T +E + ++ + P+ +S N +A E F +
Sbjct: 189 YTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMA 248
Query: 286 IEG--PLSIDQGLVLI----------------LLKKKNLVA--------IDSLLS-GIMD 318
+G P + G++L +K +VA ID+ G+MD
Sbjct: 249 AKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMD 308
Query: 319 KSIQL-----------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+++ + D ST+I C R A+ F + + Y +LI
Sbjct: 309 EAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLI 368
Query: 368 GILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--D 424
K E+V EM G + ++H + R + A IF L+ + +
Sbjct: 369 QGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGE 428
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + LI Y G KA + M GI P T+N L+ G K GR+ D
Sbjct: 429 RSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDG 486
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 145/349 (41%), Gaps = 36/349 (10%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK-CCKAGETR 223
R PP +TY V+M RA + E L F ++ G++ DK A N +++ CC
Sbjct: 2 RVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDD 61
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDS--------LLWQVHPQFSPEFISD 275
+ ++LR M E L F A+ ++ D+N S ++ + SP+ ++
Sbjct: 62 AVKVLLRRMTE--LGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTY 119
Query: 276 NDAVEFVTTDIEGPLS---------IDQGLVLILLKKKNLV-------AIDS---LLSGI 316
N + EG + + QG V ++ +++ A+D+ LL +
Sbjct: 120 NTVIHGFFK--EGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQM 177
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+D + + +++I R + A F L + ++ + + L K
Sbjct: 178 VDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRS 237
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED---QKCTATYTA 433
+ AEI M GH + +L+H + F+ + D C +T
Sbjct: 238 KEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLV-FTI 296
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
LI Y G D+A+ I M +G+ P + T++ L++ L ++GR++DA
Sbjct: 297 LIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADA 345
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 107/520 (20%), Positives = 203/520 (39%), Gaps = 77/520 (14%)
Query: 11 ILKYST---WDSAQDLLKNLP--------IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS 59
I YST W+ A + + + + W+S+ ++ + K E A +F++ ++
Sbjct: 193 IHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSF-MDSLCKHGRSKEAAEIFYSMAAK- 250
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + TY +L + + M F M+ GI + + +T ++ + G +D
Sbjct: 251 -GHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDE 309
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I EM+ + P + +Y+ + L R+ +A D + +MI G+ PN Y L++
Sbjct: 310 AMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQ 369
Query: 180 YLVRAGKYEEALEIFSKMQEAGV-QPDKAACNILIEKCCKAGETRTIILILRYMKE---- 234
G +A E+ +M G+ +P+ A N ++ CK G I +K+
Sbjct: 370 GFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGER 429
Query: 235 ------NRLALRYPVFKEALQTFKVADE-------NDSLLWQ--VHPQFSPEFISD--ND 277
N L Y + E + F V D D+ + V+ F I D N
Sbjct: 430 SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNL 489
Query: 278 AVEFVTTDIEGPLSIDQGLVL-ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
E I+ P ++ ++L L + VA +L ++ + + I++ C
Sbjct: 490 FREMSDKKIK-PTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLC 548
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ D A++ F+ M++ T LNT
Sbjct: 549 RNNCTDEAIVMFQKLCTMNVKFNITT----------LNT--------------------- 577
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTM 454
+I+ + + +R A +FS + + +TY +I GS ++A ++ +M
Sbjct: 578 ----MINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY--RKEKKSI 492
+ G P N + L + G + A Y + + KSI
Sbjct: 634 EKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSI 673
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 9/215 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y T+ G+ K+IS + +FE M++ G + D TY ++ G+VD
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDE 495
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+NI+EE++ +C P I+SY + + L N V EA +KEM ++GL P+ TY+ LME
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ + E A +F +M G QP+ NIL++ K+G T + + MK+ L
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTP 615
Query: 238 -ALRYPVFKEALQT-----FKVADENDSLLWQVHP 266
++ Y V E LQ+ ++ +N W V P
Sbjct: 616 DSITYTVL-ERLQSGSHGKSRIRRKNPITGWVVSP 649
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 184/445 (41%), Gaps = 27/445 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + FTY +L + ++ S V+ ++ G +D Y ++ L+ + A
Sbjct: 198 GLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKA 254
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++E+MK + C SYT ++ + + EA ++ EMI GL N Y LM+
Sbjct: 255 CQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQV 314
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + ++A+++FS+M E G +P++ ++++ G+ + I+ K
Sbjct: 315 LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQGI 374
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
Y L E L + +S + D+ + + G
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDM---WSFPVKGERDSYMSMLESLCGA----------- 420
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K + AI+ +LS I +K + D+ + +T+ ++ FE K + +
Sbjct: 421 --GKTIEAIE-MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDI 477
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI ++ + I EE+ ++ + LI+ LG A F
Sbjct: 478 FTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKE 537
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ E TY+ L+ + + A +++ M KG P++ T+N+LL LEK GR
Sbjct: 538 MQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGR 597
Query: 479 VSDA-EIYRKEKKSIQADALSKDAV 502
++A ++Y K K+ L+ D++
Sbjct: 598 TAEAVDLYTKMKQQ----GLTPDSI 618
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 37/246 (15%)
Query: 23 LLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH--DRFTYTTMLDIFGEAK 80
L+K +K +S+T +L+ + + F+ R H D F Y +LD + +
Sbjct: 193 LVKKWGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDE 252
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+ VFE M+++ D +YT ++ + G D AV ++ EM + +V Y
Sbjct: 253 KACQ---VFEDMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYN 309
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME--------------------- 179
M++L V +A V+ M++ G PN YTY++++
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRY 369
Query: 180 -------YLVRA----GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
YLVR G EA +F M V+ ++ + ++E C AG+T I +
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 229 LRYMKE 234
L + E
Sbjct: 430 LSKIHE 435
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFN-WVSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFE 90
SY V + K E LF + W +G +R +Y +ML+ + G K I +++ + +
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKG---ERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
+ EKG+ D + Y +V L + +++E+MK P I +Y +
Sbjct: 433 I-HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVG 491
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
V EA ++++E+ + P+ +Y L+ L + G +EA F +MQE G+ PD +
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
L+E C + K R+ + Y +F+E L
Sbjct: 552 TLME-C--------------FGKTERVEMAYSLFEEML 574
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G N D TY+T+++ FG+ +R+ +FE M KG + VTY ++ L +G
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRT 598
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKI 145
AV+++ +MK + P ++YT ++
Sbjct: 599 AEAVDLYTKMKQQGLTPDSITYTVLERL 626
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T ++ FG+ + ++ L+++ G+ +++ TY ++ + D A +++ E+
Sbjct: 173 TVNILIGFFGDTE---DLQMCLRLVKKWGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEI 229
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ I +Y + L +++ A V+++M +R + Y+YT+++ + R GKY
Sbjct: 230 RRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYSYTIMIRTMGRIGKY 286
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+EA+ +F++M G+ + N L++ K I + M E
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 195/476 (40%), Gaps = 44/476 (9%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINI 99
+ H P E A FF + R+ G D + +L F EAKR ++ + E G
Sbjct: 125 RAHRP-ELALAFFGQLLRT-GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVP 182
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATD 157
D +Y ++ L N G A ++ M C P +V+Y + F V +A D
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 242
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
++KEM+QRG+PP+ TY+ ++ L +A ++A +M GV PD N LI
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302
Query: 218 KAGETRTIILILRYMKENRL-------------ALRYPVFKEALQTFKVADENDSLLWQV 264
G+ + + + + M+ + +Y KEA F + ++ Q
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF----DTMAMKGQN 358
Query: 265 HPQFSPEFISDNDAVEFVTTDIEG--PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
FS + + A + D+ L + G+ ++ L+ + G++DK++
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA-NCGMLDKAMI 417
Query: 323 L-----DSAV------ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+ D V T+I C + D A+ F + + ++ AY LI
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL-----LPEDQK 426
+ K E++ E+ G L + +I+ L R + A IF L L D
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD-- 535
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y L+ Y G +KAL+++ M GI P++ + L+ G K+GR+ +
Sbjct: 536 -AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 171/425 (40%), Gaps = 47/425 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++++ +A+ + + M KG+ D TY ++++ S+ G
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +++EM+ + P +V+ M L ++KEA DV+ M +G P+ ++YT+++
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G + ++F M G+ P N+LI+ G ++I M+++ +
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + D + + + + D A + I+G +
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL---IQGFCTHGS----- 481
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
LLK K L+ S IM+ ++LD +II C R A F+ +V + L+ +
Sbjct: 482 LLKAKELI------SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 535
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y L+ + K + + M AG V
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV------------------------ 571
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
Y L+ Y G D+ L +++ M +KGI PS +N+++ GL + GR
Sbjct: 572 ---------VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 622
Query: 480 SDAEI 484
A++
Sbjct: 623 VPAKV 627
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G Y ++D EA R K F M E GI ++ TY+ V+ L D
Sbjct: 600 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDE 659
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++E++ I++ + +F RV+EA D++ + + GL P TY++++
Sbjct: 660 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMIT 719
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ G EEA ++FS MQ AG +PD N ++ + K E
Sbjct: 720 NLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 761
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 27 LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
+P K+ + + Q TH + KA + + + G D + ++++ + R+ +
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGSIINNLCKLGRVMDAQ 521
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY----TAY 142
+F+L G++ DAV Y +M G ++ A+ +++ M P +V Y Y
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
KI R+ E +++EM+Q+G+ P+ Y ++++ L AG+ A F +M E+G
Sbjct: 582 CKI----GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG- 636
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
I + KC T ++LR + +NR F EA+ FK
Sbjct: 637 --------IAMNKC-------TYSIVLRGLFKNR------CFDEAIFLFK 665
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 28/345 (8%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P YTY +LM+ RA + E AL F ++ G++ D + L++ C+A T
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166
Query: 225 IILILRYMKENRLA-----LRYPVFKEALQTFKVADENDSLLWQVHPQ---FSPEFISDN 276
+ IL + + L Y + ++L + + D LL + SP+ ++ N
Sbjct: 167 ALDILLH-RTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225
Query: 277 DAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ E V I L +V L K + + ++ L +++K
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ D+ + +I + A+ F+ + + + A L+G L K +
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGV 437
++ + M G + V+ ++++ + V +F L+ D T+ LI
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 405
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y + G DKA+ I+ M G+ P + T+ ++A L ++G++ DA
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 4/201 (1%)
Query: 35 TVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N ++K + ++KA + FN + R G TY T++ ++ F
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M ++G+ D Y ++ G + A + E+ IV + + + L R
Sbjct: 457 MIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGR 516
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V +A +++ + GL P+ Y +LM+ GK E+AL +F M AG++P+
Sbjct: 517 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 576
Query: 212 LIEKCCKAGETRTIILILRYM 232
L+ CK G + + R M
Sbjct: 577 LVNGYCKIGRIDEGLSLFREM 597
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 216/532 (40%), Gaps = 60/532 (11%)
Query: 2 RDTISNVYKIL-KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS--- 57
R T+ + + L K W A DLL+ K D+ Q++ + +A LF +S
Sbjct: 239 RSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISG---LMEASLFNEAMSFLH 295
Query: 58 --RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
R + + TY T+L F + K++ K + +M +G N + S++H NA
Sbjct: 296 RMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAE 355
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYM------------KILFLNDRVKE--------- 154
D A ++ M C P V Y ++ ++L L ++V E
Sbjct: 356 DYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVL 415
Query: 155 --------------------ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
A + KEM+++G P+ TYT ++ +L +A + ++A +F
Sbjct: 416 NKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLF 475
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEA-LQT 250
+M++ GV PD ILI+ CKAG + ++ +R + + Y A L++
Sbjct: 476 QEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKS 535
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
++ ND V P I+ + ++ + G + + L+ + + D
Sbjct: 536 KQLYQANDIFHRMVGDACYPNAITYSALIDGLCK--AGEIQKACEVYAKLIGTSDNIESD 593
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
G +I + ++ C ++ A + + + Y AL+
Sbjct: 594 FYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGF 653
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT-- 428
K+ E+ MTK G+ V+ LI R+ R A K+ S + +D C
Sbjct: 654 CKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS-CNPN 712
Query: 429 -ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
TYTA++ G +KAL + M +KG P++ T+ L+ GL K G+V
Sbjct: 713 VVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKV 764
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 154/334 (46%), Gaps = 21/334 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G ++ Y ++D F + I S + VF M + G TYTS++ + G +D A
Sbjct: 638 GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +M C P +V+YTA + L ++A ++ M ++G PN TYT L++
Sbjct: 698 MKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDG 757
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +AGK + LE+F +M+ G P+ ILI CC AG L+L MK+
Sbjct: 758 LGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQT----H 813
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+P + LQ ++ + FS F++ +E + + P++ G+++
Sbjct: 814 WPKY---LQGYRTTVQG----------FSKRFLASLGLLEEMESHDTAPIAPVYGMLIDS 860
Query: 301 LKKKN-LVAIDSLLSGIMDKSIQLDSA---VISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
K L L +M+ S L+ A + +++I+ C + + A+ + + +
Sbjct: 861 FSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGI 920
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ +A++ L+ LI+ N + + ++ + + G
Sbjct: 921 VPDLSAFVCLVKGLIERNKWNEALQLCYGICQEG 954
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 162/401 (40%), Gaps = 42/401 (10%)
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ G K + + V E+M+ KG DA TYT V+ +L A VD A +++EMK P
Sbjct: 427 LCGVGKFEKAFQIVKEMMR-KGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNP 485
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+ +YT + +++A + EM G PN TYT L+ +++ + +A +IF
Sbjct: 486 DVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIF 545
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KV 253
+M P+ + LI+ CKAGE ++A + + K+
Sbjct: 546 HRMVGDACYPNAITYSALIDGLCKAGE----------------------IQKACEVYAKL 583
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG-LVLILLKKKNLVAIDSL 312
+D+ I + E TD P + G LV L K + + L
Sbjct: 584 IGTSDN-------------IESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDL 630
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
L ++ + + V +++ C D A F K Y +LI + K
Sbjct: 631 LDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFK 690
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---A 429
+++ +M K + V ++ L A + SL+ E + C+
Sbjct: 691 DGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLM-EKKGCSPNVV 749
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
TYTALI AG D L+++ M KG P+ T+ +L+
Sbjct: 750 TYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 158/455 (34%), Gaps = 57/455 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ TY ++ + A ++ V + M G +D T S L G A
Sbjct: 199 GYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDA 258
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ E K V T + L EA M PN TY L+
Sbjct: 259 LDLLEREDFK---LDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTG 315
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
++ + I + M G P + N L+ C A + + M
Sbjct: 316 FLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPG 375
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
Y V+ + + +E + PE + D E V ++ + +
Sbjct: 376 YVVYNIFIGSICGREELPN----------PELL---DLAEKVYEEML--------VASCV 414
Query: 301 LKKKNLVAIDSLLSGI--MDKSIQL-----------DSAVISTIIEVNCDHRRRDGALLA 347
L K N L G+ +K+ Q+ D++ + +I C +R D A L
Sbjct: 415 LNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLL 474
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F+ K+ +N + Y LI K + +EM AG S V L+H
Sbjct: 475 FQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLK 534
Query: 408 ARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKG------ 458
+++ A IF + D C TY+ALI AG KA ++Y +
Sbjct: 535 SKQLYQANDIFHRMVGD-ACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESD 593
Query: 459 ----------IHPSLGTFNVLLAGLEKLGRVSDAE 483
I P++ T+ L+ GL K +VSDA
Sbjct: 594 FYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAH 628
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
G +KR + + E M+ A Y ++ S AG ++ A+ + +EM +
Sbjct: 827 GFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNM 886
Query: 137 VS---YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
S +T+ ++ L L+ +V+EA +Y EM +RG+ P+ + L++ L+ K+ EAL++
Sbjct: 887 ASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946
Query: 194 FSKMQEAGVQ 203
+ + GV
Sbjct: 947 CYGICQEGVN 956
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 36/191 (18%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG---- 115
+G + + TYT ++D G+A ++ + +F M+ KG + VTY +++ AG
Sbjct: 742 KGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDD 801
Query: 116 ----------------------DVDG-------AVNIWEEMKLKECYPTIVSYTAYMKIL 146
V G ++ + EEM+ + P Y +
Sbjct: 802 AHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSF 861
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYT---YTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
R++ A +++KEM++ N + +T L++ L + + EEA+ ++S+M+ G+
Sbjct: 862 SKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIV 921
Query: 204 PDKAACNILIE 214
PD +A L++
Sbjct: 922 PDLSAFVCLVK 932
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 178/434 (41%), Gaps = 28/434 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTYTT+L F + + VFE M+ G + T+ +++ N G+
Sbjct: 390 KGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVE 449
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++EE+K+ EC P IV++ + + N E + V+KEM + G P T+ L+
Sbjct: 450 MMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 509
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G +++A+ I+ +M +AGV PD + N ++ + G +L MK+ R
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKP 569
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L + E + + A E + IE + + LVL+
Sbjct: 570 NELTYCSLLHAYANGKEVERM--------------SALAEEIYSGIIEPQAVLLKTLVLV 615
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR--RRDGALLAFEYSVKMDLN 357
K L + + ++ D ++ ++ + R + +L F +
Sbjct: 616 YSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPS 675
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH------RLGSARRP 411
L T Y +L+ + + F K +I+ E+ G + +I R+ A R
Sbjct: 676 L--TTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRI 733
Query: 412 VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
K F L P+ TY I Y S +A+ + K M + G P+ T+N L+
Sbjct: 734 FAEMKDFGLAPD----VITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLID 789
Query: 472 GLEKLGRVSDAEIY 485
KL R +A +
Sbjct: 790 WFCKLNRRDEASSF 803
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 190/449 (42%), Gaps = 65/449 (14%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + G+ R S + ++ G++ID YTS++ ++ G AV ++++++ +
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250
Query: 132 CYPTIVSYTA----YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C PT+++Y Y K+ ++ D M G+ P+ YTY L+ R Y
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVD---SMKSSGVAPDLYTYNTLISSCRRGSLY 307
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EEA E+F +M+ AG PDK N L++ K+ R + +L+ M+ + A +
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ + D LL ++A+E + ++ +G+ K ++
Sbjct: 368 ISAYA----RDGLL--------------DEAMELKSQMVK------KGI------KPDVF 397
Query: 308 AIDSLLSGIMDKSIQLDSA--VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+LLSG +K+ + D A V + C + F +KM N R ++
Sbjct: 398 TYTTLLSGF-EKTGKDDYAMKVFEEMRVAGCQPN-----ICTFNALIKMHGN--RGNFVE 449
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
++ + ++ K+ E V ++ L V+ + + + + A +PE
Sbjct: 450 MMKVFEEI----KICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA---GFVPERD 502
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
T+ LI Y G D+A+ IY+ M G+ P L T+N +LA L + G +E
Sbjct: 503 ----TFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKV 558
Query: 486 RKEKKSIQADALSKDAVPMEEKICDLLYG 514
E K D K P E C LL+
Sbjct: 559 LAEMK----DGRCK---PNELTYCSLLHA 580
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S G D +TY T++ VFE M+ G + D VTY +++ +
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRP 342
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ + +EM+ P+IV+Y + + + + EA ++ +M+++G+ P+ +TYT L
Sbjct: 343 REAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTL 402
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ + GK + A+++F +M+ AG QP+ N LI+
Sbjct: 403 LSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIK 439
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +GF+ D T M+ I+G + +S + +++ G TY S+M+ S
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHF 692
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + +I E+ K P I+S+ + N R+KEA+ ++ EM GL P+ TY
Sbjct: 693 EKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTF 752
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + EA+++ M + G +P++ N LI+ CK
Sbjct: 753 IASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCK 793
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 68 TYTTMLDIFGE-AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY +L+++G+ S + + + M+ G+ D TY +++ + A ++EE
Sbjct: 257 TYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEE 316
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK P V+Y A + + + R +EA +V KEM G P+ TY L+ R G
Sbjct: 317 MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGL 376
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+EA+E+ S+M + G++PD L+ K G+ + + M+
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 193/475 (40%), Gaps = 42/475 (8%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINI 99
+ H P E A FF + R+ G D + +L F EAKR ++ + E G
Sbjct: 125 RAHRP-ELALAFFGQLLRT-GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVP 182
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATD 157
D +Y ++ L N G A ++ M C P +V+Y + F V +A D
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 242
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
++KEM+QRG+PP+ TY+ ++ L +A ++A +M GV PD N LI
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302
Query: 218 KAGETRTIILILRYMKENRL-------------ALRYPVFKEALQTFKVADENDSLLWQV 264
G+ + + + + M+ + +Y KEA F + ++ Q
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF----DTMAMKGQN 358
Query: 265 HPQFSPEFISDNDAVEFVTTDIEG--PLSIDQGLVL------ILLKK-KNLVAIDS---L 312
FS + + A + D+ L + G+ +L+K N +D +
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMII 418
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+ + D ++ T+I C + D A+ F + + ++ AY LI
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL-----LPEDQKC 427
+ K E++ E+ G L + +I+ L R + A IF L L D
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD--- 535
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y L+ Y G +KAL+++ M GI P++ + L+ G K+GR+ +
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 172/425 (40%), Gaps = 47/425 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++++ +A+ + + M KG+ D TY ++++ S+ G
Sbjct: 250 RGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 309
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +++EM+ + P +V+ M L ++KEA DV+ M +G P+ ++YT+++
Sbjct: 310 AVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLN 369
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G + ++F M G+ PD N+LI+ G ++I M+++ +
Sbjct: 370 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + D + + + + D A + I+G +
Sbjct: 430 HVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCL---IQGFCTHGS----- 481
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
LLK K L+ S IM+ ++LD +II C R A F+ +V + L+ +
Sbjct: 482 LLKAKELI------SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPD 535
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y L+ + K + + M AG V
Sbjct: 536 AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV------------------------ 571
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
Y L+ Y G D+ L +++ M +KGI PS +N+++ GL + GR
Sbjct: 572 ---------VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 622
Query: 480 SDAEI 484
A++
Sbjct: 623 VPAKV 627
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G Y ++D EA R K F M E GI ++ TY+ V+ L D
Sbjct: 600 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDE 659
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++E++ I++ + +F RV+EA D++ + + GL P TY++++
Sbjct: 660 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMIT 719
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ G EEA ++FS MQ AG +PD N ++ + K E
Sbjct: 720 NLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 761
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 4/214 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+ I D YT N ++K + ++KA + FN + R G TY T++
Sbjct: 385 DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPHVVTYMTVIAALCR 443
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
++ F M ++G+ D Y ++ G + A + E+ IV
Sbjct: 444 IGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVF 503
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ + + L RV +A +++ + GL P+ Y +LM+ GK E+AL +F M
Sbjct: 504 FGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 563
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
AG++P+ L+ CK G + + R M
Sbjct: 564 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 31/230 (13%)
Query: 27 LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
+P K+ + + Q TH + KA + + + G D + ++++ + R+ +
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN-GMRLDIVFFGSIINNLCKLGRVMDAQ 521
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY----TAY 142
+F+L G++ DAV Y +M G ++ A+ +++ M P +V Y Y
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
KI R+ E +++EM+Q+G+ P+ Y ++++ L AG+ A F +M E+G
Sbjct: 582 CKI----GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG- 636
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
I + KC T ++LR + +NR F EA+ FK
Sbjct: 637 --------IAMNKC-------TYSIVLRGLFKNR------CFDEAIFLFK 665
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 143/345 (41%), Gaps = 28/345 (8%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P YTY +LM+ RA + E AL F ++ G++ D + L++ C+A T
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166
Query: 225 IILILRYMKENRLA-----LRYPVFKEALQTFKVADENDSLLWQVHPQ---FSPEFISDN 276
+ IL + + L Y + ++L + + D LL + SP+ ++ N
Sbjct: 167 ALDILLH-RTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225
Query: 277 DAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ E V I L +V L K + + ++ L +++K
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ D+ + +I + A+ F+ + + + A L+G L K +
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT--ALIGV 437
++ + M G + V+ ++++ + V +F L+ D YT LI
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 405
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y + G DKA+ I+ M G+ P + T+ ++A L ++G++ DA
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 4/204 (1%)
Query: 32 DSYTVNQVLKTHPPMEKAW---LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D +T N ++ H KA L F + +GF D TY ++L F + + ++ V
Sbjct: 100 DLWTYNAMVSVHGRCGKAQEAELMFKELV-EKGFQPDAVTYNSLLYAFAKEGDVERVERV 158
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
E + + G D +TY +++H G +D A+ +++EM+ C P V+YT + L
Sbjct: 159 CEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGK 218
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
DR+ EA V +EM GL P T++ L+ ++G+ ++A F +M E+GV+PD+ A
Sbjct: 219 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLA 278
Query: 209 CNILIEKCCKAGETRTIILILRYM 232
++++ ++ ETR ++++ R M
Sbjct: 279 YLVMLDVFARSDETRKLMVLYRAM 302
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D TY TM+ ++G+ R+ +++ M+ G DAVTYT ++ L + A
Sbjct: 166 GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 225
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EEM PT+V+++A + + R +A + M++ G+ P+ Y V+++
Sbjct: 226 GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 285
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
R+ + + + ++ M + G +PD +L+ K E I +++ M+
Sbjct: 286 FARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 338
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNA 114
R + D ++ T+++ ++ +++ EL+ E G+ DA+TY +++ S
Sbjct: 21 RDQDIEPDLVSFNTLINARAKSGCLAA-GVALELLHEVRQAGLRPDAITYNTLISACSQG 79
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
++D AV ++EEM EC P + +Y A + + + +EA ++KE++++G P+ TY
Sbjct: 80 SNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTY 139
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L+ + G E + ++ +AG + D N +I K G
Sbjct: 140 NSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMG 185
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR--GFNHDRFTYTTMLDIFGEAKRISSMK 86
+ D T N ++ + M + L R G D TYT ++D G+ RIS
Sbjct: 167 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAG 226
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
V E M + G+ VT+++++ + +G D A ++ M P ++Y + +
Sbjct: 227 KVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVF 286
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+D ++ +Y+ MI+ G P+ Y VL+ L + +++E + M+
Sbjct: 287 ARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 338
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 144/380 (37%), Gaps = 69/380 (18%)
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE-------ATDVYK 160
M + +G D A + + M+ ++ P +VS+ +N R K A ++
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNT-----LINARAKSGCLAAGVALELLH 55
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KCC 217
E+ Q GL P+ TY L+ + ++A+ +F +M + +PD N ++ +C
Sbjct: 56 EVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCG 115
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
KA E + FKE V F P+ ++ N
Sbjct: 116 KAQEAELM------------------FKEL----------------VEKGFQPDAVTYN- 140
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
L+ K+ ++ ++ + ++ + D +T+I +
Sbjct: 141 -----------------SLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGK 183
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
R D AL ++ + + Y L+ L K++ + +++EEM AG +
Sbjct: 184 MGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVT 243
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMC 455
+ LI + R A + F + E + Y ++ V+ + K + +Y+ M
Sbjct: 244 FSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMI 303
Query: 456 RKGIHPSLGTFNVLLAGLEK 475
+ G P G + VLLA L K
Sbjct: 304 KDGYKPDDGLYQVLLAALAK 323
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 73 LDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG--AVNIWEEMKLK 130
+ ++ + R + + + M+++ I D V++ ++++ + +G + A+ + E++
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P ++Y + + +A V++EMI P+ +TY ++ R GK +EA
Sbjct: 61 GLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEA 120
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+F ++ E G QPD N L+ K G+ +
Sbjct: 121 ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERV 155
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A L F+ V+ + Y +L+ K +V + EE+ KAG +IH
Sbjct: 120 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 179
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
G R A ++ + CT TYT L+ +A K+ + M G+
Sbjct: 180 MYGKMGRLDLALGLYDEM-RAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLK 238
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P+L TF+ L+ K GR DAE
Sbjct: 239 PTLVTFSALICAYAKSGRQDDAE 261
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 220/546 (40%), Gaps = 104/546 (19%)
Query: 22 DLLKNLPIKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D +KN I D YT N ++ + ++A F+ + R+ GF D+ T+ ++LD++G+
Sbjct: 238 DSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEM-RAAGFEPDKVTFNSLLDVYGK 296
Query: 79 AKR--------------------------ISS------MKYVFELMQE---KGINIDAVT 103
A+ ISS +K EL +E KGI D +T
Sbjct: 297 ARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVIT 356
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL----------------- 146
YT+++ L AG +D A+ ++EM C P + +Y A +K+
Sbjct: 357 YTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLR 416
Query: 147 ---FLNDRV---------------KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
F+ D V E + V+KEM + G P TY L+ R G ++
Sbjct: 417 SAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFD 476
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFK 245
+++EI+ +M EAG+ PD + N ++ + G + + + + L Y
Sbjct: 477 QSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLL 536
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
A K D+ +L ++ + IE + + LVL+ K N
Sbjct: 537 HAYANAKKLDKMKALSEDIYAE-----------------KIESHHGLVKTLVLVNSKVNN 579
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
L + + + LD V++ ++ V +R +NL Y +
Sbjct: 580 LSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNS 639
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------ 419
L+ + +L K I+ E+ +G Y +I+ G + A+++FS
Sbjct: 640 LMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSG 699
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L+P+ TY + Y + ++A+ + + M +G P+ T+N +L + G++
Sbjct: 700 LIPD----IVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKI 755
Query: 480 SDAEIY 485
+DA+ +
Sbjct: 756 ADAKSF 761
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 163/394 (41%), Gaps = 66/394 (16%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV----KEA 155
DA YT+++ S A AV ++ M P IV+Y +L + ++ K+
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNV---VLHVYSKIAVPWKDV 233
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ M G+P + YTY L+ R Y+EA ++F +M+ AG +PDK N L++
Sbjct: 234 VALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDV 293
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
KA I +L+ M+ + + ++ D LL + + +
Sbjct: 294 YGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYV----KDGLLKEAAE------LKE 343
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
V+ + D+ + +L+SG +D++ ++D+A+ +
Sbjct: 344 EMEVKGIQPDV--------------------ITYTTLISG-LDRAGKIDAAIGTY----- 377
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
D R+G K +L Y ALI + FP++ + +++ AG V
Sbjct: 378 -DEMLRNGC--------KPNL----CTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDV 424
Query: 396 YLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALK 449
L+ G + +F +PE TY +LI Y G D++++
Sbjct: 425 VTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERD----TYVSLISSYSRCGLFDQSME 480
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
IYK M GI+P + T+N +L+ L + GR AE
Sbjct: 481 IYKRMIEAGIYPDISTYNAVLSALARGGRWEQAE 514
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 39/199 (19%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
VN + EKA+L R + D M+ ++G+ + + ++ + LM+
Sbjct: 573 VNSKVNNLSETEKAFLELG----RRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGS 628
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNI-------------------------------- 123
IN+ TY S+MH S GD + NI
Sbjct: 629 SINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEA 688
Query: 124 ---WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EMK P IV+Y ++K N +EA D+ + M+ RG PN TY +++
Sbjct: 689 SRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQE 748
Query: 181 LVRAGKYEEALEIFSKMQE 199
R GK +A S + +
Sbjct: 749 YCRHGKIADAKSFLSNLPQ 767
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 184/485 (37%), Gaps = 69/485 (14%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V VL++ A FF W GF HD FTY ++++ K S + E M +
Sbjct: 89 VAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA 148
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY---------------- 139
GI + ++ ++ + D AV +E MK K C P + ++
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208
Query: 140 --------------------TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
TA ++ L RVKEA +V+ +M + G PP+ Y +++
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +AG +EAL++ M P + IL+ CKAG + R M +
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328
Query: 240 RYPVFKEALQTFKVAD---ENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
++ + F + E SL + V + P+ I+ T I+G
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH-------TVMIDG------- 374
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L K N +M + + +TII+ R A + +
Sbjct: 375 ----LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y+ L+ KL + A++++E+ K S + L + L++ L
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG---SVE 487
Query: 416 KIFSLLPEDQKCTA-------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
K L E K A + ++G+ G D+A +I++ M +G P T+N+
Sbjct: 488 KTLDDLFEQSKAAAETLDPGLCCSIIVGLC-KTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Query: 469 LLAGL 473
L+ GL
Sbjct: 547 LINGL 551
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 186/523 (35%), Gaps = 97/523 (18%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTH--------PPMEKAWLFFNWVSRS 59
V + K T + A++L + + + N V+ T M++A F+ + +
Sbjct: 302 VNSLCKAGTLERAEELFRVMAAS--GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G+ D T+T M+D ++ FE M G + VTYT+++ LS G V
Sbjct: 360 -GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVAN 418
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A I + M C+P V+Y + R+ EA + E+ + PN Y+ L+
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVN 478
Query: 180 YLV------------------------------------RAGKYEEALEIFSKMQEAGVQ 203
L + G+ +EA IF +M G +
Sbjct: 479 GLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD NILI C++ E R E AL + + K
Sbjct: 539 PDATTYNILINGLCRSRENRV---------ERAFALLHDLEKVG---------------- 573
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
+ P DAV + PL I L K + +L +
Sbjct: 574 ----YLP------DAVTYT------PLCIG------LCKIGEVDRAVKMLEEASSRGWNA 611
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D + + C + D A+ F+ V+ + AY +I LIK+ +
Sbjct: 612 DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFF 671
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTAT--YTALIGVYFS 440
+EM G V L+ L A A F S+L + + Y ALI +
Sbjct: 672 DEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCK 731
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
A D ALK+++ M +G P+ T L GL + G+ A+
Sbjct: 732 ALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQ 774
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 127/321 (39%), Gaps = 15/321 (4%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q G + +TY LM LV Y + I +M +AG+ P+ + NILI +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+ MK R K L TF + D L + + E + A+ FV
Sbjct: 172 DAVTCFEIMKRKRC-------KPDLHTFLIL--VDCLCKAGMDEKAFEVFHEMMAMGFVP 222
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
D ++ +V LLK K + + + D+ +T+I+
Sbjct: 223 PD----RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
AL + + Y L+ L K T + E+ M +G + LIH
Sbjct: 279 ALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338
Query: 404 RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
+ R A +F + E + T+T +I +G+ ++A K ++ M R G P
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
++ T+ ++ GL K+GRV++A
Sbjct: 399 NVVTYTTIIQGLSKIGRVANA 419
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 1/210 (0%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+ SRG+N D YT + ++ +F+ M +G DA Y +++ L
Sbjct: 604 ASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKK 663
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYT 175
++ A ++EM K PT+ +YTA ++ L V EA ++ M+ RG L + Y
Sbjct: 664 LEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYD 723
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ +A K + AL++F M G P L + ++G+T +L+ M
Sbjct: 724 ALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAG 783
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVH 265
F L + +DE+ LL V
Sbjct: 784 GSPPHAATFTAILDGLRKSDESGKLLKLVQ 813
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 191/423 (45%), Gaps = 52/423 (12%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ E M+ G DA T+T ++ ++NAGD+DGA++ M C P +V+YTA +
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNVVTYTALIAAFA 68
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+++EA + +EM +RG PPN TY VL++ L + A ++ KM E G P+
Sbjct: 69 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 128
Query: 208 ACNILIEKCCKAG---ETRTI--ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
N L++ CK G + R + I++ + M+ N + Y + L
Sbjct: 129 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN--VVTYSALIDGLCK------------ 174
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSID-QGLVLILLKKKNLVAIDSLLSGIMDKSI 321
S +F+ + +E + P + L+ L K + + +L +
Sbjct: 175 ------SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 228
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA-----YLALIGILIKLNTF 376
D V S+II C + G LL + +++ ++ +R + Y +I L KL
Sbjct: 229 TPDVVVYSSIIHAFC----KSGKLLEAQKTLQ-EMRKQRKSPDVVTYNTVIDGLCKLGKI 283
Query: 377 PKVAEIVEEMTKAGHSL-GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA------ 429
+ I+++M ++G L V + +I+ L + V A K+ D+ C A
Sbjct: 284 AEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL-----DRMCKAGCNPDV 338
Query: 430 -TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
TYT +I G ++A + + M R G P++ T+ L++GL K +V +AE +E
Sbjct: 339 VTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 398
Query: 489 KKS 491
++
Sbjct: 399 MRN 401
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 190/454 (41%), Gaps = 35/454 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S GF D FT+T ++ A + + ++ G + + VTYT+++ + A +
Sbjct: 17 KSAGFAPDAFTHTPIITAMANA---GDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKL 73
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ + EEM+ + C P +V+Y + L V A DV K+MI+ G PN T+ L
Sbjct: 74 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 133
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ + G ++A ++ M G++P+ + LI+ CK+ + +L MK + +
Sbjct: 134 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGV 193
Query: 238 ---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
A Y L +E + +L ++ A T D+ +
Sbjct: 194 TPDAFTYSALIHGLCKADKIEEAEQMLRRM-------------AGSGCTPDV----VVYS 236
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD-HRRRDGALLAFEYSVK 353
++ K L+ L + + D +T+I+ C + + ++ +
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL------GALLIHRLGS 407
D+ + Y +I L K + + ++++ M KAG + V G RL
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356
Query: 408 ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A + K P TYT LI A D+A ++ + M G P+L T+N
Sbjct: 357 AEYLLQGMKRAGCAPN----VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 412
Query: 468 VLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDA 501
++ GL GR+ +A+ + K +A+ S DA
Sbjct: 413 TMVNGLCVSGRIKEAQQLVQRMKDGRAEC-SPDA 445
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 187/448 (41%), Gaps = 27/448 (6%)
Query: 17 WDSAQDLLKNLPIKWDSYTVNQVLKTHP---PMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
D A D L+++ + T ++ +E+A + R RG + TY ++
Sbjct: 41 LDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEM-RERGCPPNLVTYNVLV 99
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
D + + + + V + M E G + +T+ S++ G+VD A + M K
Sbjct: 100 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR 159
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P +V+Y+A + L + + EA +V +EM G+ P+ +TY+ L+ L +A K EEA ++
Sbjct: 160 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQM 219
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQT 250
+M +G PD + +I CK+G+ L+ M++ R + + Y + L
Sbjct: 220 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
E +L Q+ Q S + + D V +T I G L K LV
Sbjct: 280 LGKIAEAQVILDQM--QESGDVLPD---VVTYSTVING-----------LCKSDMLVEAQ 323
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
LL + D +TII+ C R + A + + Y LI L
Sbjct: 324 KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGL 383
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ-KCT- 428
K + ++EEM AG + +++ L + R A ++ + + + +C+
Sbjct: 384 CKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSP 443
Query: 429 --ATYTALIGVYFSAGSADKALKIYKTM 454
ATY ++ S+ +A ++ + M
Sbjct: 444 DAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 130/306 (42%), Gaps = 25/306 (8%)
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
AG ALE+ +M+ AG PD +I AG+ + LR M + + Y
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTA 62
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
A K +E LL ++ + P VT ++ LV L K
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPP--------NLVTYNV---------LVDALCKL 105
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA--LLAFEYSVKMDLNLERT 361
+ A ++ +++ + +++++ C D A LL + M N+
Sbjct: 106 SMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNV--V 163
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y ALI L K F + E++EEM +G + + + LIH L A + A ++ +
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223
Query: 422 PEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
CT Y+++I + +G +A K + M ++ P + T+N ++ GL KLG+
Sbjct: 224 A-GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 282
Query: 479 VSDAEI 484
+++A++
Sbjct: 283 IAEAQV 288
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 192/437 (43%), Gaps = 36/437 (8%)
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
E R+ K +F ++E G+ D+VTY +M S G VD AVN+ EM C P
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
++ + + L+ RV EA ++ M L P TY L+ L + G+ ++A+E+F
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
M E P+ + N L++ CK E + + + K + + V + +
Sbjct: 602 SMIEKKCSPNTISFNTLLDCFCKNDEVELALKM--FSKMTVMDCKPDVLTYNTVIYGLIK 659
Query: 256 EN--DSLLW---QVHPQFSPEFISDNDAVEFVTT--DIEGPLSIDQGLVLILLKKKNLVA 308
EN + W Q+ P+ ++ + + I +SI + + + + N
Sbjct: 660 ENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719
Query: 309 IDSLLSGI-----MDKSI------------QLDSAVISTIIEVNCDHRRRDGALLAFE-Y 350
+ L+ G MDK+I + DS +I ++ V C H+R A F+ +
Sbjct: 720 WEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIP-LVRVLCKHKRELYAYQIFDKF 778
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ K+ ++ +Y LIG L++++ K ++ ++M G + + +L+ G + +
Sbjct: 779 TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGK 838
Query: 411 PVPAAKIFSLLPE--DQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
++F L E ++C TY +I + + DKAL + + P+ T
Sbjct: 839 ---ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRT 895
Query: 466 FNVLLAGLEKLGRVSDA 482
+ L+ GL K+GR+ +A
Sbjct: 896 YGPLIDGLAKVGRLEEA 912
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 178/447 (39%), Gaps = 17/447 (3%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
+ L+ H +E F ++ + + D TY T+ + M V M++ G
Sbjct: 130 EFLRVHDKVEDMAAVFEFMQK-KIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGF 188
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
++A +Y ++H L +G A+ ++ M + P++ +Y+A M L +
Sbjct: 189 VLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMV 248
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ KEM GL PN YT+T+ + L RAGK +EA EIF +M + G PD +LI+ C
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALC 308
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
AG+ + MK N ++ L F ND +F + +D
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKF-----NDFGDLDTFKEFWSQMEADGY 363
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
+ VT I LV +L K ++ + + + I + +T+I
Sbjct: 364 MPDVVTFTI---------LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLR 414
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
R + AL + + Y I K K E E+M G +
Sbjct: 415 AGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMC 455
++ L R A +F+ L E+ + TY ++ Y G D+A+ + M
Sbjct: 475 CNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI 534
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA 482
R G P + N L+ L K GRV +A
Sbjct: 535 RNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 211/483 (43%), Gaps = 29/483 (6%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
++A+ F+ V R +G + TY T++ A RI + M+ G+ A TY
Sbjct: 384 DEAFATFD-VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNI 442
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+ + +G+ AV +E+MK K P IV+ A + L R++EA ++ + + G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L P+ TY ++M+ + G+ +EA+ + S+M G +PD N LI+ KAG
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 227 LILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ MK+ +L+ + L +V + + + SP IS N ++
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 283 TTDIEGPLSIDQGLVLILLK-KKNLVAIDSLLSGI---------------MDKSIQLDSA 326
+ E L++ + ++ K +++ ++++ G+ + KS+ D
Sbjct: 623 CKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHV 682
Query: 327 VISTIIE--VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
I T++ V C + D +A ++ ++ + R+ + L+G + K E
Sbjct: 683 TICTLLPGLVKCG-QIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAE 741
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED---QKCTATYTALIGVYFSA 441
E+ G L+ L +R + A +IF + A+Y LIG
Sbjct: 742 ELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEV 801
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKE-KKSIQADALSK 499
+KA ++K M G P TFN+LLA K G++++ E+Y++ + + DA++
Sbjct: 802 HYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITY 861
Query: 500 DAV 502
+ V
Sbjct: 862 NIV 864
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 197/466 (42%), Gaps = 25/466 (5%)
Query: 24 LKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+++L ++ + YT +VL +++A+ F + G D TYT ++D A
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD-DEGCGPDLVTYTVLIDALCNAG 311
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
++ + K +F M+ G D V Y +++ ++ GD+D W +M+ P +V++T
Sbjct: 312 QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ +L EA + M ++G+ PN +TY L+ L+RAG+ E+AL++ M+
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESV 431
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
GVQP NI I+ K+GET + MK + +L +
Sbjct: 432 GVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR---- 487
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMD 318
L + F+ + +N P S+ +++ K V A++ LLS ++
Sbjct: 488 LREAKTMFNG--LRENGL---------APDSVTYNMMMKCYSKVGQVDEAVN-LLSEMIR 535
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ D V++++I+ R D A F+ M L+ Y L+ L K K
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQK 595
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP--EDQKCTATYTALIG 436
E+ E M + S L+ A K+FS + + + TY +I
Sbjct: 596 AIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ A + + +K +HP T LL GL K G++ DA
Sbjct: 656 GLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDA 700
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 181/429 (42%), Gaps = 31/429 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D+ Y T+LD F + + + K + M+ G D VT+T ++ L A D
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++ M+ + P + +Y + L R+++A + M G+ P YTY +
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++Y ++G+ +A+E F KM+ G+ P+ ACN + + G R + ++EN L
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
A + Y + + DE +LL + + P+ I N ++ + +D
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID----SLYKAGRVD 559
Query: 294 QGLVLILLKKK-----NLVAIDSLLSGI-----MDKSIQLDSAVI-----------STII 332
+ + K +V ++LLSG+ + K+I+L ++I +T++
Sbjct: 560 EAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLL 619
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C + + AL F MD + Y +I LIK N ++ K+ H
Sbjct: 620 DCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHP 679
Query: 393 LGVYLGALL--IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
V + LL + + G + A+ F + + + L+G DKA+
Sbjct: 680 DHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIF 739
Query: 451 YKTMCRKGI 459
+ + GI
Sbjct: 740 AEELVLNGI 748
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+ ++L+ H EKAW F + ++ G D FT+ +L + G++ +I+ + +++ M +
Sbjct: 795 IGELLEVHYT-EKAWDLFKDM-KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR 852
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
DA+TY V+ L+ + ++D A++ + ++ + PT +Y + L R++EA
Sbjct: 853 RCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+++EM G PNC + +L+ + G E A ++F +M G++PD + IL++
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDC 972
Query: 216 CCKAG 220
C AG
Sbjct: 973 LCLAG 977
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/513 (20%), Positives = 196/513 (38%), Gaps = 63/513 (12%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
DS T N ++K + + + N +S G D +++D +A R+ +F
Sbjct: 506 DSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMF 565
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
+ M++ ++ VTY +++ L G V A+ ++E M K+C P +S+ + N
Sbjct: 566 DRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKN 625
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
D V+ A ++ +M P+ TY ++ L++ K A F +++++ + PD
Sbjct: 626 DEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTI 684
Query: 210 NILIEKCCKAGETRTIILILR-YMKENRLALRYP-------------------VFKEALQ 249
L+ K G+ I I R +M + R + +F E L
Sbjct: 685 CTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELV 744
Query: 250 TFKVADENDSLL---------------WQVHPQF------SPEFISDN----DAVEFVTT 284
+ E+ L+ +Q+ +F SP S N + +E T
Sbjct: 745 LNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYT 804
Query: 285 DIEGPLSIDQG-------------LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ L D L+ + K + + L ++ + + D+ + +
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I D AL F V D Y LI L K+ + + EEM+ G
Sbjct: 865 ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
+ +LI+ G A ++F + + + +YT L+ AG D+AL
Sbjct: 925 KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + G+ P +N ++ GL K R+ +A
Sbjct: 985 YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 20 AQDLLKNLPIKWDSYTVN--QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
A++L+ N + DS+ + +VL H A+ F+ ++ G + +Y ++
Sbjct: 740 AEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELL 799
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E +F+ M+ G DA T+ ++ +G + +++EM + C P +
Sbjct: 800 EVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAI 859
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + L ++ + +A D + +++ P TY L++ L + G+ EEA+ +F +M
Sbjct: 860 TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ G +P+ A NILI K G+T T + + M
Sbjct: 920 SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F +S G + + +++ +G+ + +F+ M +GI D +YT
Sbjct: 909 LEEAMRLFEEMS-DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYT 967
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L AG VD A+ + E+K P ++Y + L + R++EA +Y EM R
Sbjct: 968 ILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR 1027
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G+ P+ YTY LM L AG E+A ++ ++Q AG++PD N LI
Sbjct: 1028 GIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 17 WDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLD 74
WD +D+ KN+ D++T N +L H K F SR D TY ++
Sbjct: 808 WDLFKDM-KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
++ + F + TY ++ L+ G ++ A+ ++EEM C P
Sbjct: 867 SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926
Query: 135 TIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ Y KI + A ++K M+ G+ P+ +YT+L++ L AG+ +EA
Sbjct: 927 NCAIFNILINGYGKI----GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982
Query: 191 LEIFSKMQEAGVQPDKAACNILI 213
L F++++ G+ PD A N +I
Sbjct: 983 LYYFNELKSTGLDPDFIAYNRII 1005
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 30 KWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
K D+ T N V+ + ++KA FF + S F TY ++D + R+
Sbjct: 855 KPDAITYNIVISSLAKSNNLDKALDFF-YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+FE M + G + + +++ GD + A +++ M + P + SYT + L
Sbjct: 914 RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL 973
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
L RV EA + E+ GL P+ Y ++ L ++ + EEAL ++++M+ G+ PD
Sbjct: 974 CLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDL 1033
Query: 207 AACNILIEKCCKAG 220
N L+ AG
Sbjct: 1034 YTYNSLMLNLGLAG 1047
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A +FN + +S G + D Y +++ G+++R+ ++ M+ +GI D TY
Sbjct: 979 VDEALYYFNEL-KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYN 1037
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+M L AG V+ A ++EE++L P + +Y A ++ L++ + A VYK M+
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097
Query: 166 GLPPNCYTYTVL 177
G PN TY L
Sbjct: 1098 GCNPNIGTYAQL 1109
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D +YT ++D A R+ Y F ++ G++ D + Y +++ L + ++
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++ EM+ + P + +Y + M L L V++A +Y+E+ GL P+ +TY L+
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ E A ++ M G P+
Sbjct: 1076 RGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 168/433 (38%), Gaps = 71/433 (16%)
Query: 46 MEKAWLF-----FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK-GINI 99
M+KA +F N + R F ++ + + KR +F+ +K GI+
Sbjct: 733 MDKAIIFAEELVLNGICREDSF------LIPLVRVLCKHKRELYAYQIFDKFTKKLGISP 786
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+Y ++ L + A +++++MK C P ++ + + + ++ E ++Y
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
KEMI R P+ TY +++ L ++ ++AL+ F + + +P LI+ K
Sbjct: 847 KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G +EA++ F+ + S N A+
Sbjct: 907 GR----------------------LEEAMRLFE--------------EMSDYGCKPNCAI 930
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ + G + D L K+ ++++ I+ D + +++ C
Sbjct: 931 FNILINGYGKIG-DTETACQLFKR------------MVNEGIRPDLKSYTILVDCLCLAG 977
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R D AL F L+ + AY +I L K + + EM G +Y
Sbjct: 978 RVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYN 1037
Query: 400 LLIHRLG------SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
L+ LG A+R ++ L P+ TY ALI Y + + + A +YK
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPD----VFTYNALIRGYSLSENPEHAYTVYKN 1093
Query: 454 MCRKGIHPSLGTF 466
M G +P++GT+
Sbjct: 1094 MMVDGCNPNIGTY 1106
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 90/461 (19%), Positives = 177/461 (38%), Gaps = 39/461 (8%)
Query: 27 LPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
+ K D T N V L + A+ FF+ + +S + D T T+L + +I
Sbjct: 641 MDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIG 698
Query: 84 -SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
++ + M + ++ + +M ++D A+ EE+ L
Sbjct: 699 DAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPL 758
Query: 143 MKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+++L + R A ++ + ++ G+ P +Y L+ L+ E+A ++F M+ G
Sbjct: 759 VRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVG 818
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADEND 258
PD N+L+ K+G+ + + + M R A+ Y + +L D+
Sbjct: 819 CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKAL 878
Query: 259 SLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
+ V F P T GPL ID L K L L +
Sbjct: 879 DFFYDLVSSDFRP------------TPRTYGPL-IDG-----LAKVGRLEEAMRLFEEMS 920
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
D + + A+ + +I + A F+ V + + +Y L+ L
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCTATY 431
+ E+ G +I+ LG ++R A +++ ++P+ TY
Sbjct: 981 EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPD----LYTY 1036
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+L+ AG ++A ++Y+ + G+ P + T+N L+ G
Sbjct: 1037 NSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 4/137 (2%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +I L K N K + ++ + LI L R A ++F +
Sbjct: 860 TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919
Query: 422 PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
D C A + LI Y G + A +++K M +GI P L ++ +L+ L GR
Sbjct: 920 -SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 479 VSDAEIYRKEKKSIQAD 495
V +A Y E KS D
Sbjct: 979 VDEALYYFNELKSTGLD 995
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 38/192 (19%)
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
H + + FE+ K + + YL + L ++ ++ +M KAG L Y
Sbjct: 135 HDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYS 194
Query: 398 GALLIHRL------GSA----RRPV-----PAAKIFSLLP-------------------E 423
LIH L G A RR V P+ K +S L E
Sbjct: 195 YNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEME 254
Query: 424 D---QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
D + T+T I V AG D+A +I++ M +G P L T+ VL+ L G++
Sbjct: 255 DLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLE 314
Query: 481 DA-EIYRKEKKS 491
+A E++ K K +
Sbjct: 315 NAKELFVKMKAN 326
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 119/524 (22%), Positives = 226/524 (43%), Gaps = 75/524 (14%)
Query: 32 DSYTVNQVLKTHPPMEKAW----LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
D +T N ++ H KA +F V + GF D TY ++L F + +++
Sbjct: 169 DLWTYNAMVSVHGRCGKAQDAERMFRELVEK--GFKPDAVTYNSLLYAFAKEGDADTVER 226
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V E + G D +TY +++H G +D A+ +++EM+ C P V+YT + L
Sbjct: 227 VCEELVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLG 286
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
DR+ +A V +EM GL P T++ L+ + G+ EEA+ FS M +GV+PD+
Sbjct: 287 KMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRL 346
Query: 208 ACNILIEKCCKAGETRTIILILR------YMKENRLALRYPVFKEALQTFKVADENDSLL 261
A ++++ ++G+ R ++ + + Y +N L Y V AL DE ++++
Sbjct: 347 AYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNAL---YQVMLAALAKGNEYDEIEAVV 403
Query: 262 --WQVHPQFSPEFISD----------------NDAVEFVTTDIEGPLSI----------D 293
+V Q +P+ +S ++ D + LSI +
Sbjct: 404 QDMEVVCQMNPQLVSSILIKAECISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHE 463
Query: 294 QGLVLILLKKK------NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
+GL L+ ++ NL++ S++ ++ I S++ + C +D L
Sbjct: 464 EGLSLLQFIREHVPSSCNLISECSIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNL-- 521
Query: 348 FEYSVK--------------------MDLNLERTAYLALIGILIKLNTFPKVA-EIVEEM 386
+EY + + + R Y ++I KL FP+ A ++++E
Sbjct: 522 YEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLG-FPETAHQLMDEA 580
Query: 387 TKAGHSLGVYLGAL-LIHRLGSARRPVPAAKIFSLLPEDQKC-TATYTALIGVYFSAGSA 444
++G SL + + +I G + A L ++ + ALI Y +G
Sbjct: 581 VQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSIDRRIWNALIHAYAESGLY 640
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ A ++ M KG P++ + N ++ L GR+ + + +E
Sbjct: 641 EHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQE 684
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM---QEKGINIDAVTYTSVMHWLSNA 114
R + D ++ T+++ ++ ++ F+L+ ++ G+ D +TY +++ S
Sbjct: 90 RGQELEPDLVSFNTLINARAKSGCLAPGS-AFDLLLEVRQVGLRPDVITYNTLISACSQG 148
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
++D AV ++EEM EC P + +Y A + + + ++A +++E++++G P+ TY
Sbjct: 149 SNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTY 208
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L+ + G + + ++ AG + D N +I K G
Sbjct: 209 NSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMG 254
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/432 (17%), Positives = 163/432 (37%), Gaps = 58/432 (13%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV--DGAVNIWEE 126
+ M+ ++ + R ++ + + M+ + + D V++ ++++ + +G + A ++ E
Sbjct: 66 FNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLE 125
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
++ P +++Y + + +A V++EM+ P+ +TY ++ R GK
Sbjct: 126 VRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGK 185
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI--------------------I 226
++A +F ++ E G +PD N L+ K G+ T+
Sbjct: 186 AQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNT 245
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
+I Y K RL L ++ DE +L +P DAV +
Sbjct: 246 MIHMYGKMGRLDLALGLY----------DEMRAL------GCTP------DAVTYTV--- 280
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
L+ L K + +L + D ++ S +I RR+ A+
Sbjct: 281 ---------LIDSLGKMDRISDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVR 331
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
F + V + +R AYL ++ I+ + K+ + + M G+ L +++ L
Sbjct: 332 TFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNALYQVMLAALA 391
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ + + C + + A + K+ K C +G P +
Sbjct: 392 KGNEYDEIEAVVQDM--EVVCQMNPQLVSSILIKAECISQGAKLLKKACLQGHEPDSKSL 449
Query: 467 NVLLAGLEKLGR 478
+L E G+
Sbjct: 450 LSILDAYETTGK 461
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 82/419 (19%), Positives = 168/419 (40%), Gaps = 27/419 (6%)
Query: 71 TMLDIFGEAKRISSMK-YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
TM++ +G+ K + +V L QE +ID + +++H + +G + A +++ M
Sbjct: 595 TMIEAYGKIKLWQHAENFVKGLKQEP--SIDRRIWNALIHAYAESGLYEHARAVFDIMIE 652
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K PTI S M+ L ++ R+ E + +E+ G + T ++++ +AG E
Sbjct: 653 KGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFE 712
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
++I++ M+EAG P+ +I C+ R + L++ M+ + L
Sbjct: 713 VMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLL- 771
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL--VLILLKKKNLV 307
L++ + F + VE + +E L ++ LI++ +NL
Sbjct: 772 ----------LMYTGNGNF-------DKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLR 814
Query: 308 AID--SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+ +LL+ + K + +++ + + + A FE L R+ Y
Sbjct: 815 PEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHM 874
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
L+ I K +++ M + G + +L+ G+A P A K+ + L
Sbjct: 875 LMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSS 934
Query: 425 -QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ T Y+ + Y G + + M G+ P + + R +DA
Sbjct: 935 LEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAASLCERTADA 993
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 78/175 (44%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ + Y +M+ + KR ++ + M+ G D +++ + G+ D
Sbjct: 724 GYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKT 783
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++ + P +Y + + N R +E + EM ++GL P +Y L+
Sbjct: 784 VEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAA 843
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+A +E+A ++F +++ G + +++ ++L++ A +L MKE+
Sbjct: 844 SGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKED 898
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 1/188 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+ + N + + +G +Y ++L G+AK + +FE ++ KG ++ Y
Sbjct: 816 EEGFTLLNEMGK-KGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHM 874
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M +A + A + MK PTI + M EA V +
Sbjct: 875 LMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSS 934
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L + Y+ + ++ G Y + +M+ GV+PD I T I
Sbjct: 935 LEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAASLCERTADAI 994
Query: 227 LILRYMKE 234
L+L +++
Sbjct: 995 LLLNSLRD 1002
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 65/159 (40%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + T MLD F +A I + ++ M+E G + Y S++ L
Sbjct: 689 GFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDV 748
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P + + + N + +VY +++ GL PN TY L+
Sbjct: 749 ELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVM 808
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
R + EE + ++M + G+ P + L+ KA
Sbjct: 809 YSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKA 847
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 190/485 (39%), Gaps = 63/485 (12%)
Query: 8 VYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
V + K+ + A LL + IK D+ T N +++ + + + +S + N
Sbjct: 383 VKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNL 442
Query: 65 DRFTYTTMLDIFGEAKR--ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
YT + I G + I VFE+M G+ +AV YT+++ G AV
Sbjct: 443 VPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVR 502
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
I + M K P ++ Y + + L + +++EA D EMI+RGL PN YTY L+
Sbjct: 503 ILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYC 562
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
++G+ + A F +M G+ P+ C LI+ CK G T I R M
Sbjct: 563 KSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM---------- 612
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
L VHP V + I G LL+
Sbjct: 613 -----------------LGRSVHPD-----------VRTYSALIHG-----------LLR 633
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
L LLS ++K + D ++II C A EY + ++
Sbjct: 634 NGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIIT 693
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL- 421
Y ALI L K + E+ + + G + A +I + A ++F +
Sbjct: 694 YNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMT 753
Query: 422 ----PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
P D + Y+ALI G+ +KAL ++ +KG S + N L+ G K G
Sbjct: 754 LKGVPPD---SFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSG 809
Query: 478 RVSDA 482
+V +A
Sbjct: 810 KVIEA 814
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 189/444 (42%), Gaps = 27/444 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E W F+N + + HD +TYT +++ A K + M+EKG + VTY
Sbjct: 217 LELFWRFYNGMLEANVL-HDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYN 275
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
V+ L AG+VD A + + M K + +Y+ + R EA + +EM +
Sbjct: 276 VVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSK 335
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P YT L++ +R G EA + +M GV+ + N L++ CK G+
Sbjct: 336 GLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKA 395
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+L M + + ++ + + ++N S + + +S+ V
Sbjct: 396 DALLNEMIMVGIKPDTQTYNNMIEGY-LKEQNTSRV--------KDLLSEMKKSNLV--- 443
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM-DKSIQLDSAVISTIIEVNCDHRRRDGA 344
P + G+++ L + + S + IM ++ ++ + +T+I+ + R A
Sbjct: 444 ---PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEA 500
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
+ + K + + Y ++I L K + + + EM + G VY LIH
Sbjct: 501 VRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560
Query: 405 LGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+ A + F + P D C TALI Y GS +A I++ M +
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIAPNDVVC----TALIDGYCKEGSTTEATSIFRCMLGRS 616
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
+HP + T++ L+ GL + G++ A
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGA 640
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 189/465 (40%), Gaps = 59/465 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTY+ ++D FG+ KR + K + E M KG+ V YT+++ GD
Sbjct: 300 KGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGE 359
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + EEM + + +Y A +K + +++A + EMI G+ P+ TY ++E
Sbjct: 360 AFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIE 419
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-----KE 234
++ ++ S+M+++ + P C ++I C+ G + M K
Sbjct: 420 GYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKP 479
Query: 235 NRL--------ALRYPVFKEALQTFKVADEN---------DSLLWQVHPQFSPEFISDND 277
N + ++ F+EA++ KV D+ +S++ + E D
Sbjct: 480 NAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDY- 538
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
VE + ++ + L+ K + D ++ I + V + +I+ C
Sbjct: 539 LVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCK 598
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
A F + ++ + Y ALI L++ E++ E + G
Sbjct: 599 EGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG------- 651
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L+P+ TY ++I + G KA ++++ MC+K
Sbjct: 652 ----------------------LVPD----VFTYNSIISGFCKQGGIGKAFQLHEYMCQK 685
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
GI P++ T+N L+ GL K G + A R+ I L+ +AV
Sbjct: 686 GISPNIITYNALINGLCKAGEIERA---RELFDGIPGKGLAHNAV 727
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 166/405 (40%), Gaps = 27/405 (6%)
Query: 59 SRGFNHDRFTYTTML-DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R + D TY+ ++ + K +M+ + E + EKG+ D TY S++ G +
Sbjct: 614 GRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFL-EKGLVPDVFTYNSIISGFCKQGGI 672
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + E M K P I++Y A + L ++ A +++ + +GL N TY +
Sbjct: 673 GKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET-RTIILILRYMKENR 236
++ ++G +A +F +M GV PD + LI+ C K G T + + L L +++
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF 792
Query: 237 LALRY--PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + ++ KV + N L V P+ ++ + ID
Sbjct: 793 ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYT-------------ILIDY 839
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA-FEYSVK 353
LK+ +D M K + +A+ T + + R + A F+ +
Sbjct: 840 HCKTGFLKEAEQFFVD------MQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIA 893
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
D+ + + +I +K K ++V++M K G ++ + +LI L
Sbjct: 894 KDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSE 953
Query: 414 AAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
K+ + E AT + L+ + AG D A ++ K+M R
Sbjct: 954 VLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVR 998
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 183/478 (38%), Gaps = 24/478 (5%)
Query: 12 LKYSTWDSAQDLLKNL------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHD 65
LK +DLL + P + + L H +E A F + S G +
Sbjct: 422 LKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFE-IMVSLGVKPN 480
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
YTT++ + R + ++M +KG+ D + Y SV+ L + ++ A +
Sbjct: 481 AVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLV 540
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
EM + P + +Y A + + ++ A +KEM+ G+ PN T L++ + G
Sbjct: 541 EMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEG 600
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
EA IF M V PD + LI + G+ + + +L E L +
Sbjct: 601 STTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYN 660
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+ F +Q+H + IS N +T + L+ L K
Sbjct: 661 SIISGF-CKQGGIGKAFQLHEYMCQKGISPN----IITYN---------ALINGLCKAGE 706
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+ L GI K + ++ +TII+ C A F+ + + Y A
Sbjct: 707 IERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
LI K K + E + G + L AL+ S + + A ++ + +
Sbjct: 767 LIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSG-KVIEANQLLEDMVDKH 825
Query: 425 -QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ TYT LI + G +A + + M ++ + P+ T+ LL+G GR S+
Sbjct: 826 VKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSE 883
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 159/369 (43%), Gaps = 39/369 (10%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLK---THPPMEKAWLFFNWVSRSRG 61
++ +L+ A +LL K D +T N ++ + KA+ ++ + +G
Sbjct: 628 IHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQ-KG 686
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ + TY +++ +A I + +F+ + KG+ +AVTY +++ +G++ A
Sbjct: 687 ISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAF 746
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+++EM LK P Y+A + ++A ++ E +Q+G + LM+
Sbjct: 747 RLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGF 805
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
++GK EA ++ M + V+PD ILI+ CK G + M++ L
Sbjct: 806 CKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA 865
Query: 242 PVFKEALQTFKVAD-----------------ENDSLLWQVHPQFSPEFISDNDAVEFV-- 282
+ L + +A E D + W V + + D V+ +
Sbjct: 866 LTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSV---MIDAHLKEGDHVKTLKL 922
Query: 283 TTDI---EGPLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
D+ G +S + VLI L +K+++ + +L I ++ + L A ST+ V C
Sbjct: 923 VDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTL--VRCF 980
Query: 338 HR--RRDGA 344
H+ + DGA
Sbjct: 981 HKAGKMDGA 989
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 114/247 (46%), Gaps = 8/247 (3%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKA F S +GF + ++D F ++ ++ + E M +K + D VTYT
Sbjct: 778 EKALSLF-LESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTI 835
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ + G + A + +M+ + P ++YTA + + R E ++ EMI +
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ P+ T++V+++ ++ G + + L++ M + G K C++LI+ C+ ++
Sbjct: 896 IEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVL 955
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDS----LLWQVHPQFSPEFISDND--AVE 280
+L ++E L L ++ F A + D L V ++ P+ ND VE
Sbjct: 956 KVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVE 1015
Query: 281 FVTTDIE 287
+TD E
Sbjct: 1016 QDSTDSE 1022
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/520 (18%), Positives = 199/520 (38%), Gaps = 58/520 (11%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWL-FFNWVSRSRG 61
+ ++ + L W+S L+ N K V+ V+ K L FFNWV G
Sbjct: 40 NIVNEITTFLNQKNWESLLPLVSN---KLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMG 96
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFE---LMQEKGIN--IDA--------------- 101
F+ +++ + I ++ S V +M G + +D+
Sbjct: 97 FSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNG 156
Query: 102 ----------VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
V + ++ G D AV+ + K ++ + L ++
Sbjct: 157 NENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANK 216
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
++ Y M++ + + YTYT L+ RAG +E + +M+E G P N+
Sbjct: 217 LELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNV 276
Query: 212 LIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ- 267
+I C+AGE + + M + L Y + + K E +L ++ +
Sbjct: 277 VIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKG 336
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
P ++ T I+G + +K++ ++ + ++L+
Sbjct: 337 LKPGHVA-------YTALIDGFMRQGDSGEAFRVKEE-----------MLARGVKLNLFT 378
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +++ C + A + + + + Y +I +K +V +++ EM
Sbjct: 379 YNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK 438
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSAD 445
K+ Y ++I+ L A+++F ++ + YT LI + G
Sbjct: 439 KSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQ 498
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
+A++I K M +KG+ P + +N ++ GL K ++ +A+ Y
Sbjct: 499 EAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDY 538
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK-- 487
TYT LI +F AG+A + ++ M KG PSL T+NV++ GL + G V +A +K
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297
Query: 488 EKKSIQADALS 498
+KK + AD +
Sbjct: 298 DKKGLVADVFT 308
>gi|168040538|ref|XP_001772751.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675976|gb|EDQ62465.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 526
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 187/417 (44%), Gaps = 55/417 (13%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TYT M+D G+A I + +F+ M G + +TY+S++ L AG + A N+
Sbjct: 103 DTITYTMMIDCMGKAGHIQAAFDLFQEMHRMGYKANVITYSSLIRSLCKAGRISEACNLL 162
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M++ C P V+Y + L + YKEM GL PN T V++ LVR
Sbjct: 163 SGMRINGCNPNDVTYNGLIVGLGGAGQADLVCSYYKEMKSFGLIPNLPTQAVVISSLVRI 222
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
GK EA +F Q A ++ +++ ++++ L K NR + + F
Sbjct: 223 GKLSEAHSLF---QTAALKSSTFDFDVM----------KSVVGSL--CKSNRCEVGFKFF 267
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
++A ++ V + ++ +++ V +T G +S D
Sbjct: 268 QDAKKSGYVPSSGACSVL-IYSLSKVGMVAEALCVYGEST--RGGVSPD----------- 313
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
L+A+++L + ++ K +L++A+ ++ HR D A A+
Sbjct: 314 -LMALNALTNSLV-KEEKLEAAI--DVVRFINKHRIGDDAY----------------AHE 353
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
L+ +L K + F V I +E+ K G + V+L LI++LG A R A K F +
Sbjct: 354 RLVDLLCKTHRFEDV--ISQELPKQGFAPNVHLYNKLIYQLGEAGRINDALKTFERMCS- 410
Query: 425 QKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ C T TY +I + G D A ++++ M KG P+L T+N+++ L + GR
Sbjct: 411 ESCYPDTRTYNVVINLLGGVGKVDLAHQLFEQMKEKGCKPNLQTYNIMVGHLVRAGR 467
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+TML + G+A+R + + + M+ G + + V+ A ++ ++ + M
Sbjct: 2 YSTMLRLLGDARRFDYLWALLDDMKRDGHRVTPTIFLGVIRSYVKANQIEDSLKTFHAMD 61
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+C PT + Y + + IL + +A +++ M P+ TYT++++ + +AG +
Sbjct: 62 KYDCKPTTLVYNSMIDILRTSGDYVQAEKLFRSMNPSSCAPDTITYTMMIDCMGKAGHIQ 121
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
A ++F +M G + + + LI CKAG +L M+ N
Sbjct: 122 AAFDLFQEMHRMGYKANVITYSSLIRSLCKAGRISEACNLLSGMRIN 168
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A ++++ R D + + ++D+ + R + + + + ++G + Y
Sbjct: 330 LEAAIDVVRFINKHR-IGDDAYAHERLVDLLCKTHRFEDV--ISQELPKQGFAPNVHLYN 386
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L AG ++ A+ +E M + CYP +Y + +L +V A ++++M ++
Sbjct: 387 KLIYQLGEAGRINDALKTFERMCSESCYPDTRTYNVVINLLGGVGKVDLAHQLFEQMKEK 446
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
G PN TY +++ +LVRAG+Y+ ++ +M ++P + A IL
Sbjct: 447 GCKPNLQTYNIMVGHLVRAGRYQLGPKLCREMVANHIEPREGALKIL 493
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A+ F + R G+ + TY++++ +A RIS + M+ G N + VTY
Sbjct: 120 IQAAFDLFQEMHR-MGYKANVITYSSLIRSLCKAGRISEACNLLSGMRINGCNPNDVTYN 178
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTI----VSYTAYMKI--------LFLNDRVK 153
++ L AG D + ++EMK P + V ++ ++I LF +K
Sbjct: 179 GLIVGLGGAGQADLVCSYYKEMKSFGLIPNLPTQAVVISSLVRIGKLSEAHSLFQTAALK 238
Query: 154 EAT---DVYKEMI--------------------QRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+T DV K ++ + G P+ +VL+ L + G EA
Sbjct: 239 SSTFDFDVMKSVVGSLCKSNRCEVGFKFFQDAKKSGYVPSSGACSVLIYSLSKVGMVAEA 298
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L ++ + GV PD A N L K + I ++R++ ++R+
Sbjct: 299 LCVYGESTRGGVSPDLMALNALTNSLVKEEKLEAAIDVVRFINKHRIG 346
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF + Y ++ GEA RI+ FE M + D TY V++ L G VD
Sbjct: 376 QGFAPNVHLYNKLIYQLGEAGRINDALKTFERMCSESCYPDTRTYNVVINLLGGVGKVDL 435
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E+MK K C P + +Y + L R + + +EM+ + P +L
Sbjct: 436 AHQLFEQMKEKGCKPNLQTYNIMVGHLVRAGRYQLGPKLCREMVANHIEPREGALKILQF 495
Query: 180 YLVRAGKYEE 189
+ +G ++E
Sbjct: 496 HEKASGGHDE 505
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
I +E+ + P + Y + L R+ +A ++ M P+ TY V++ L
Sbjct: 369 ISQELPKQGFAPNVHLYNKLIYQLGEAGRINDALKTFERMCSESCYPDTRTYNVVINLLG 428
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
GK + A ++F +M+E G +P+ NI++ +AG + + R M N + R
Sbjct: 429 GVGKVDLAHQLFEQMKEKGCKPNLQTYNIMVGHLVRAGRYQLGPKLCREMVANHIEPREG 488
Query: 243 VFK 245
K
Sbjct: 489 ALK 491
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL- 421
Y +I + K ++ +EM + G+ V + LI L A R A + S +
Sbjct: 107 YTMMIDCMGKAGHIQAAFDLFQEMHRMGYKANVITYSSLIRSLCKAGRISEACNLLSGMR 166
Query: 422 -----PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
P D TY LI AG AD YK M G+ P+L T V+++ L ++
Sbjct: 167 INGCNPND----VTYNGLIVGLGGAGQADLVCSYYKEMKSFGLIPNLPTQAVVISSLVRI 222
Query: 477 GRVSDAE 483
G++S+A
Sbjct: 223 GKLSEAH 229
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 113/523 (21%), Positives = 218/523 (41%), Gaps = 31/523 (5%)
Query: 10 KILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+ILK W A+ L+ L ++ D + V +V+KT + FF W ++ R + HD T
Sbjct: 1056 RILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTST 1115
Query: 69 YTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ ++ M K + E+++ + + V+ L NA V A+ I+ ++
Sbjct: 1116 YMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQI 1175
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
K ++C P +Y + + +L + ++ +Y EM G P+ TY+ L+ + G+
Sbjct: 1176 KTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGR 1235
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A+++ ++M+E G+QP +LI K + + + M+ + E
Sbjct: 1236 RDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTE 1295
Query: 247 ALQTFKVA---DENDSLLWQVHPQ-FSPEFISDNDAVEFVTTD----------------- 285
++ A DE ++ + P+ + N+ + F+
Sbjct: 1296 LIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLR 1355
Query: 286 -IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
I ++ + + + K + S + + I S S +I+ C R + A
Sbjct: 1356 CIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKA 1415
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
++ E + AY +LI L K + E+ +E+ + S + A++I
Sbjct: 1416 MMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKH 1475
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LG A R A +F + C Y AL+ G D+AL + M G P
Sbjct: 1476 LGKAGRLDDAINMFDEM-NKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIP 1534
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALSKDAV 502
+ ++N++L GL K G A E+ K+S ++ D +S + V
Sbjct: 1535 DINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTV 1577
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEKA + + +GF Y +++D G+AKR +F+ ++E + A Y
Sbjct: 1412 MEKAMMLLEEMD-EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 1470
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L AG +D A+N+++EM C P + +Y A M L + EA + M +
Sbjct: 1471 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 1530
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ +Y +++ L + G A+E+ S M+++ V+PD + N ++ AG
Sbjct: 1531 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEA 1590
Query: 226 ILILRYMKENRLALRY 241
+++ M N L Y
Sbjct: 1591 SKLMKEM--NTLGFEY 1604
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 49/121 (40%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + Y ++ + MQE G D +Y +++ L+ G A
Sbjct: 1496 GCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRA 1555
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + MK P +VSY + L +EA+ + KEM G + TY+ ++E
Sbjct: 1556 MEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEA 1615
Query: 181 L 181
+
Sbjct: 1616 I 1616
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 194/456 (42%), Gaps = 54/456 (11%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
++A L F + +G + TY+ ++D F ++ + + M GI I Y S
Sbjct: 383 DEAELLFKEMGE-KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNS 441
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+++ G++ AV+ ++EM K PT+VSYT+ + ++ EA +Y EM +G
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ PN YT+T L+ L RA + +A +F +M E + P++ N++IE CK G T
Sbjct: 502 IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAF 561
Query: 227 LILRYMKENRLA----LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+L M + L P+ T +V + + +FI D F
Sbjct: 562 ELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCE-------------AKKFIDDLHREHFK 608
Query: 283 TTDI-----------EGPLSIDQGLVLILLKKK---NLVAIDSLLSGIMDKSIQLDSAVI 328
++ EG L G+ ++K+ +LV L+ G + + D++ +
Sbjct: 609 LNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQ---DTSAV 665
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+++ D R R ++ Y ++I K + K I + M
Sbjct: 666 FGLLKNMHDQRLRP----------------DKVIYTSMIDGYSKAGSVKKAFGIWDIMID 709
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADK 446
G + + LI+ L A A ++ L+ TY + GS +K
Sbjct: 710 EGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEK 769
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A++++ M KG+ + ++N+L+ G KLGRV +A
Sbjct: 770 AVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEA 804
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D+ YT+M+D + +A + ++++M ++G + VTYT++++ L AG +D A +W
Sbjct: 680 DKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLW 739
Query: 125 EEMKLKECYPTIVSYTAYMKIL-----------FLND----------------------- 150
+EM + P V+Y ++ L ND
Sbjct: 740 KEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLG 799
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
RV+EAT + EMI + P+C TY+ ++ R G + A+E + M G++PD A N
Sbjct: 800 RVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYN 859
Query: 211 ILIEKCCKAGE 221
LI CC AGE
Sbjct: 860 FLIYGCCIAGE 870
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 172/443 (38%), Gaps = 59/443 (13%)
Query: 53 FNWVSRSR--GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
F+ V+R + G F Y +++ + + + +F+ M EKG+ + VTY+ ++
Sbjct: 351 FDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDS 410
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
G +D A++ +M + T+ Y + + + A + EMI +GL P
Sbjct: 411 FCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPT 470
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
+YT L+ GK EA ++ +M G+ P+ LI +A
Sbjct: 471 VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRA----------- 519
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
NR+ + +F E L+ P ++ N IEG
Sbjct: 520 ----NRMTDAFRLFDEMLEQ----------------NMMPNEVTYN-------VMIEGH- 551
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
K+ N V LL+ ++ K + D+ +I C R A +
Sbjct: 552 ----------CKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDD 601
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ L Y AL+ K + EM K G + + A+LI G+ +
Sbjct: 602 LHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLID--GTIKE 659
Query: 411 PVPAAKIFSLLP--EDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+A +F LL DQ+ YT++I Y AGS KA I+ M +G P++ T
Sbjct: 660 QDTSA-VFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVT 718
Query: 466 FNVLLAGLEKLGRVSDAEIYRKE 488
+ L+ L K G + AE+ KE
Sbjct: 719 YTTLINELCKAGLMDKAELLWKE 741
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 1/176 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + D Y ++D + + S++ + + M ++ + D V YTS++ S AG V
Sbjct: 640 RGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKK 699
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A IW+ M + C P IV+YT + L + +A ++KEM+ PN TY ++
Sbjct: 700 AFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLD 759
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+L R G E+A+++ + M + G+ + + NIL+ CK G +L M +N
Sbjct: 760 HLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDN 814
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 157/429 (36%), Gaps = 53/429 (12%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D + Y ++ F E K + K + + M+ +N+ V Y ++H L V
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNV--VVYNVLIHGLCKNKRVW 278
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV I + K + V+Y + L + V EMI+ G P + L+
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
E L R GK +A ++ +++++ G P N LI CK G+
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGK----------------- 381
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
F EA FK E D+ + ID
Sbjct: 382 -----FDEAELLFKEMGEKG----------------------LCANDVTYSILIDS---- 410
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
++ L L ++ I++ +++I +C A+ F+ + L
Sbjct: 411 -FCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKP 469
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+Y +LI + + EMT G + Y LI L A R A ++F
Sbjct: 470 TVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529
Query: 419 SLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ E TY +I + G+ KA ++ M +KG+ P T+ L++ L
Sbjct: 530 DEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCST 589
Query: 477 GRVSDAEIY 485
GRV +A+ +
Sbjct: 590 GRVCEAKKF 598
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/465 (20%), Positives = 182/465 (39%), Gaps = 48/465 (10%)
Query: 26 NLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
++ I+ D Y V+++ ++ + R + + Y ++ + KR+
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEA 280
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ + +KG+ VTY +++ L + + + +EM PT + ++ ++
Sbjct: 281 VEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEG 340
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L +V +A D+ + + G P+ + Y L+ L + GK++EA +F +M E G+ +
Sbjct: 341 LRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN 400
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
+ILI+ C+ G+ T I L M + K+ + L H
Sbjct: 401 DVTYSILIDSFCRRGKLDTAIHFLGKM--------------IMAGIKITVYPYNSLINGH 446
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG---------- 315
+ + + AV F ID+GL K +V+ SL+SG
Sbjct: 447 CKLG----NLSAAVSFFDE------MIDKGL------KPTVVSYTSLISGYCNKGKLHEA 490
Query: 316 ------IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+ K I ++ +T+I R A F+ ++ ++ Y +I
Sbjct: 491 FRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKC 427
K K E++ +M + G Y LI L S R A K L + +
Sbjct: 551 HCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLN 610
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
Y+AL+ Y G AL + + M ++G+ L + VL+ G
Sbjct: 611 EMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDG 655
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 204/493 (41%), Gaps = 60/493 (12%)
Query: 29 IKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK Y N ++ H + A FF+ + +G +YT+++ + ++
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMI-DKGLKPTVVSYTSLISGYCNKGKLHEA 490
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
++ M KGI + T+T+++ L A + A +++EM + P V+Y ++
Sbjct: 491 FRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEG 550
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+A ++ +M+Q+GL P+ YTY L+ L G+ EA + + + +
Sbjct: 551 HCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLN 610
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ-TFKVADEND--SLLW 262
+ + L+ CK G R + + R M + + + + + T K D + LL
Sbjct: 611 EMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLK 670
Query: 263 QVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK---KNLVAIDSLL----- 313
+H Q P+ + ++ + G + G+ I++ + N+V +L+
Sbjct: 671 NMHDQRLRPDKVIYTSMIDGYSK--AGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCK 728
Query: 314 SGIMDKS-----IQLDSAVISTIIEVNC--DHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+G+MDK+ L S + C DH R+G++ E +V++ ++ +
Sbjct: 729 AGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSM---EKAVQLHNDMLKGLLANT 785
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
+ I + F K+ VEE TK LL + +A + P+
Sbjct: 786 VSYNILVRGFCKLGR-VEEATK-----------LLDEMIDNA-----------IFPD--- 819
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA---- 482
TY+ +I G+ D A++ + TM KG+ P +N L+ G G + A
Sbjct: 820 -CITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELR 878
Query: 483 -EIYRKEKKSIQA 494
++ R+ K QA
Sbjct: 879 DDMIRRGVKPNQA 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEKA N +G + +Y ++ F + R+ + + M + I D +TY+
Sbjct: 767 MEKAVQLHN--DMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYS 824
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ G++DGA+ W+ M K P ++Y + + + +A ++ +MI+R
Sbjct: 825 TIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRR 884
Query: 166 GLPPNCYTYTVL 177
G+ PN T+ L
Sbjct: 885 GVKPNQATHKSL 896
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 214/504 (42%), Gaps = 45/504 (8%)
Query: 12 LKYSTWDSAQDLLKNL---PIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHD 65
L ++ SA+ LL ++ + + YT N + L E+A R G +
Sbjct: 130 LSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPN 189
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
TY T++ F A + + + + +M+E G+ VT+ +V++ L AG ++ A +++
Sbjct: 190 VVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFD 249
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
EM + P VSY + + EA V+ EM Q+G+ P+ T+T L+ + RAG
Sbjct: 250 EMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAG 309
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYP 242
E A+ + +M+E G++ ++ LI+ C+ G +L ++ M+E R+ + Y
Sbjct: 310 NLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYN 369
Query: 243 VFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
V DE L+ ++ + P+ ++ +T + G I L
Sbjct: 370 VLINGYCKLGRMDEARELIHEMEAKGMKPDVVT-------YSTILSGYCKIGDTDSAFEL 422
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
+K ++ K + D+ S++I C+ RR A FE +++ L +
Sbjct: 423 NRK-----------MLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEF 471
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK-IFSL 420
Y LI K K + +EM K G V ++LI L + R A + +F L
Sbjct: 472 TYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531
Query: 421 LPED-----------QKCTAT-----YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
ED C T AL+ + G ++A K+Y++M +
Sbjct: 532 YYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGS 591
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKE 488
++VL+ G + G + A + K+
Sbjct: 592 VYSVLIHGHCRGGNIMKALSFHKQ 615
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 163/414 (39%), Gaps = 70/414 (16%)
Query: 134 PTIVSYTAYMKILFLND-RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P++++Y A + L L+D + A + M++ G+ PN YTY +L+ L G+ EEAL
Sbjct: 118 PSLLAYNAVL--LALSDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALG 175
Query: 193 IFS-KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+ M+ AG P+ N L+ C+AGE ++ M+E + F +
Sbjct: 176 VVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGL 235
Query: 252 ----KVADENDSLLWQVHPQFSPEFISDNDAV-----------------EFVTTDIEGPL 290
++ D +P+ +S N V E + +
Sbjct: 236 CKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDV 295
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
L+ + + NL +L+ + ++ ++++ + +I+ C + D ALLA +
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKE 355
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH------------------- 391
+ + Y LI KL + E++ EM G
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGD 415
Query: 392 ------------SLGVYLGAL----LIHRLGSARRPVPAAKIF------SLLPEDQKCTA 429
GV A+ LI L RR A ++F L P++
Sbjct: 416 TDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE----F 471
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TYT LI + G+ KAL ++ M +KG+ P + T++VL+ GL K R +A+
Sbjct: 472 TYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 30/214 (14%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FTYTT++D + + + + M +KG+ D VTY+ ++ LS + A
Sbjct: 465 GLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEA 524
Query: 121 VNIWEEMKLKECYPTIVSYTAYM---------------KILFLNDRVKEATDVYKEMIQR 165
+ ++ ++ P + Y A M K + + +A VY+ M+ R
Sbjct: 525 QRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDR 584
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ Y+VL+ R G +AL ++ G P+ T TI
Sbjct: 585 HWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNS---------------TSTI 629
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
L+ +E V +E L +AD S
Sbjct: 630 SLVRGLFEEGMTVEADNVIQELLNCCSLADAETS 663
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 101/178 (56%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N D FT++ ++D F + ++ + +++ M ++ I+ VTY+S+++ +D
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E M K C+P +VSY+ +K RV E ++++EM QRGL N TYT L++
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L +AG + A EIF +M GV P+ N L++ CK G+ +++ Y++ +++
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 188/460 (40%), Gaps = 55/460 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F + +SR F ++ +L + + + + E MQ G+ + TY+
Sbjct: 62 LDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ + A+ + +M P IV+ ++ + + R+ EA + +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN T+ L+ L K EA+ + +M G QPD +++ CK G+T
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISD------ 275
++L M++ +L L Y + L K D+ +L ++ + P ++
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 276 -------NDAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+DA ++ IE ++ D L+ +K+ LV + L ++ +SI
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S++I C H R D A FE+ V + +Y LI K + E+
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSA 444
EM++ G +G+ T TYT LI F AG
Sbjct: 421 EMSQRG-------------LVGN--------------------TVTYTTLIQGLFQAGDC 447
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
D A +I+K M G+ P++ T+N LL GL K G++ A +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 1/193 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F ++ F D +Y+T++ F +AKR+ +F M ++G+ + V
Sbjct: 374 HDRLDEAKQMFEFMVSKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TYT+++ L AGD D A I++EM P I++Y + L N ++++A V++ +
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ + P YTY +++E + +AGK E+ ++F + GV+PD A N +I C+ G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 223 RTIILILRYMKEN 235
+ + MKE+
Sbjct: 553 EEADALFKEMKED 565
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I D +T ++ +K +E L+ V RS +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS--ID 358
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
TY+++++ F R+ K +FE M K D V+Y++++ A VD + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMEL 418
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+YT ++ LF A +++KEM+ G+PPN TY L++ L +
Sbjct: 419 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+A+ +F +Q + ++P NI+IE CKAG+
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 167/432 (38%), Gaps = 51/432 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ + T+ T++ + S + + M KG D VTY V++ L GD D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M+ + P ++ YT + L N + +A +++KEM +G+ PN TY+ L+
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G++ +A + S M E + PD + LI+ ++KE +L
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA---------------FVKEGKL--- 342
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
++ K+ DE V P ++ ++ I G D+
Sbjct: 343 -------VEAEKLYDE------MVKRSIDPSIVT-------YSSLINGFCMHDR------ 376
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
L + ++ K D ST+I+ C +R D + F + L
Sbjct: 377 -----LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI L + EI +EM G + L+ L + A +F
Sbjct: 432 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
L + TY +I AG + ++ + KG+ P + +N +++G + G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 479 VSDAEIYRKEKK 490
+A+ KE K
Sbjct: 552 KEEADALFKEMK 563
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TY T+LD + ++ VFE +Q + TY ++ + AG V+
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +V+Y + +EA ++KEM + G PN Y L+
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G E + E+ +M+ G AG+ TI L+ + + RL
Sbjct: 579 RARLRDGDREASAELIKEMRSCGF----------------AGDASTIGLVTNMLHDGRL 621
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 9/215 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y T+ G+ K+IS + +FE M++ G + D TY ++ G+VD
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+NI+EE++ +C P I+SY + + L N V EA +KEM ++GL P+ TY+ LME
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ + E A +F +M G QP+ NIL++ K G T + + MK+ L
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP 615
Query: 238 -ALRYPVFKEALQTF-----KVADENDSLLWQVHP 266
++ Y V E LQ+ ++ +N W V P
Sbjct: 616 DSITYTVL-ERLQSVSHGKSRIRRKNPITGWVVSP 649
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 183/441 (41%), Gaps = 27/441 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ FTY +L + ++ S V+ ++ G +D Y ++ L+ + A ++
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVF 258
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+MK + C +YT ++ + + EA ++ EMI GL N Y LM+ L +
Sbjct: 259 EDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
++A+++FS+M E G +P++ ++L+ G+ + ++ K Y
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYL 378
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
L E L + +S + D+ + + G K
Sbjct: 379 VRTLSKLGHVSEAHRLFCDM---WSFPVKGERDSYMSMLESLCGA-------------GK 422
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ AI+ +LS I +K + D+ + +T+ ++ FE K + + Y
Sbjct: 423 TIEAIE-MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN 481
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
LI ++ + I EE+ ++ + LI+ LG A F + E
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 425 --QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY+ L+ + + A +++ M KG P++ T+N+LL LEK GR ++A
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
Query: 483 -EIYRKEKKSIQADALSKDAV 502
++Y K K+ L+ D++
Sbjct: 602 VDLYSKMKQQ----GLTPDSI 618
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 39/247 (15%)
Query: 23 LLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
L+K +K +S+T +L+ + KA+ + + R G D F Y +LD +
Sbjct: 193 LVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRG-GHKLDIFAYNMLLDALAKD 251
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
++ VFE M+++ D TYT ++ + G D AV ++ EM + +V Y
Sbjct: 252 EKACQ---VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME-------------------- 179
M++L V +A V+ M++ G PN YTY++L+
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR 368
Query: 180 --------YLVRA----GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
YLVR G EA +F M V+ ++ + ++E C AG+T I
Sbjct: 369 YMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIE 428
Query: 228 ILRYMKE 234
+L + E
Sbjct: 429 MLSKIHE 435
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFN-WVSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFE 90
SY V + K E LF + W +G +R +Y +ML+ + G K I +++ + +
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKG---ERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
+ EKG+ D + Y +V L + +++E+MK P I +Y +
Sbjct: 433 I-HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
V EA ++++E+ + P+ +Y L+ L + G +EA F +MQE G+ PD +
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
L+E C + K R+ + Y +F+E L
Sbjct: 552 TLME-C--------------FGKTERVEMAYSLFEEML 574
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G N D TY+T+++ FG+ +R+ +FE M KG + VTY ++ L G
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRT 598
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKI 145
AV+++ +MK + P ++YT ++
Sbjct: 599 AEAVDLYSKMKQQGLTPDSITYTVLERL 626
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T ++ FG + ++ L+++ + +++ TY ++ + D A +++ E+
Sbjct: 173 TVNILIGFFGNTE---DLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEI 229
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ I +Y + L +++ A V+++M +R + YTYT+++ + R GK
Sbjct: 230 RRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKC 286
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+EA+ +F++M G+ + N L++ K I + M E
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
K DL + Y L+ ++ + K ++ E+ + GH L ++ +L+ L +
Sbjct: 196 KWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK-- 253
Query: 413 PAAKIFSLLPEDQK---CTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A ++F ED K C TYT +I G D+A+ ++ M +G+ ++ +
Sbjct: 254 -ACQVF----EDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308
Query: 467 NVLLAGLEKLGRVSDAEI 484
N L+ L K G++ D I
Sbjct: 309 NTLMQVLAK-GKMVDKAI 325
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 193/472 (40%), Gaps = 39/472 (8%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R + +R+T+ +L F + ++ +FE M + GI+ D + Y ++ + G VD
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++EEM P+I +Y + + ++KEA +++K M ++G P+ TY+ ++
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 180 YLVRAGKYEEALE-IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + GK EALE +F KM E G + A N LI CK +L M
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 239 LRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFV----TTDIEGPL 290
+ L KV++ +SP+ ++ N ++ + TD L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 291 SID-------------QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
D ++L L +K N+ + + ++ + A S ++ +C
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
++ D A E K+ + Y L+ L K N K E+ M G + +
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMC 455
+++++ L + A +F + E + T+ L+ AG D+A + M
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEK 507
G P +N L+ GL K GR IQAD L++ M+EK
Sbjct: 422 CSGCAPDYVAYNTLMNGLRKQGR------------HIQADRLTQ---AMKEK 458
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+ ++ S+G+ D TY T+L ++S K F+ M +G + D V Y
Sbjct: 165 IERAYKLLEEMA-SKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN 223
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G D A+ +++++ K P V+Y + + L + EA +++K+M+
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY++++ RA K ++A ++ +M + G PD NIL++ CK
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 343
Query: 226 ILILRYMKENRLA---LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDN 276
+ M +N A + Y V L +T KV D + + P+ ++ N
Sbjct: 344 HELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 398
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 7/230 (3%)
Query: 11 ILKYSTWDSAQDLLKNLPIKW---DSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNH 64
+ K D A L K++ K D+ T N +L M++A F + S G
Sbjct: 229 LYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS-GCAP 287
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ TY+ +L AK++ V E M + G D VTY ++ L VD A ++
Sbjct: 288 NGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF 347
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M C P IVSY+ + L ++V +A ++ MI+R L P+ T+ +LM+ L +A
Sbjct: 348 STMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 407
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
GK +EA ++ +M +G PD A N L+ K G + + MKE
Sbjct: 408 GKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/372 (18%), Positives = 147/372 (39%), Gaps = 58/372 (15%)
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++EC P ++ +K ++++ ++++M+ G+ P+ Y +L++ + G+ +
Sbjct: 1 MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA ++ +M G++P N L+ CK ET+ KEA+
Sbjct: 61 EANRLYEEMVSVGLEPSIYTYNSLLNAFCK--ETK--------------------MKEAM 98
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+ FK E F P+ ++ +T I G + K A
Sbjct: 99 ELFKTMAEK---------GFEPDVVT-------YSTIISG----------LCKTGKVTEA 132
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++ L ++++ ++ + +I C + A E + Y ++
Sbjct: 133 LEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILS 192
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLP 422
L ++ + + + M G+S V L+ L + A K+F +P
Sbjct: 193 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMP 252
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ T TY +++ + D+A +++K M G P+ T++++L+G + +V DA
Sbjct: 253 D----TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308
Query: 483 EIYRKEKKSIQA 494
+E I A
Sbjct: 309 HKVLEEMSKIGA 320
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 1 MRDTI---SNVYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEK---AWL 51
M DT+ S + + + S D A+++ K + + T + VL H +K A
Sbjct: 251 MPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHK 310
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+S+ G D TY +LD + + +F M + G D V+Y+ V++ L
Sbjct: 311 VLEEMSKI-GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
V A +++ M ++ P +V++ M L ++ EA D+ +M G P+
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDY 429
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
Y LM L + G++ +A + M+E G D
Sbjct: 430 VAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA F+ + G D +Y+ +L+ + ++ + +F+ M E+ + D VT+
Sbjct: 340 VDKAHELFSTMV-DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 398
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+M L AG +D A ++ ++M C P V+Y M L R +A + + M ++
Sbjct: 399 ILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 458
Query: 166 GLPPNCY 172
G +C+
Sbjct: 459 GFLSDCF 465
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 214/501 (42%), Gaps = 40/501 (7%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
+Y D+A+ L+ ++P+ D+YT +VL + A + + R RG + TY
Sbjct: 123 RYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR-RGCQPNVVTY 181
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T +L+ V + M+ KG + VTY +++ + G VD A + +
Sbjct: 182 TVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPS 241
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
P VSYT +K L + R + +++ EM+++ PN T+ +L+ + R G E
Sbjct: 242 YGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 301
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE---NRLALRYPVFKE 246
A+++ +M E G + CNI+I CK G +L M N + Y +
Sbjct: 302 AIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK 361
Query: 247 ALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
L + D+ LL + V P ++ N F+ + L I+Q ++LI ++
Sbjct: 362 GLCRAERWDDAKELLNEMVRNNCPPNEVTFN---TFICILCQKGL-IEQAIMLIEQMSEH 417
Query: 306 -----LVAIDSLLSGI-----MDKSIQL--------DSAVISTIIEVNCDHRRRDGALLA 347
+V ++L++G +D +++L ++ +T++ C+ R DGA
Sbjct: 418 GCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAEL 477
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
++ D + L+ + + E+VE+M + G + + L+ +
Sbjct: 478 VAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK 537
Query: 408 ARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
A ++ L P+ T++++IG+ ++A++++ + G+ P
Sbjct: 538 DCSSEDALELLHGLVSKGVSPD----VITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRP 593
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
+N +L GL K + +A
Sbjct: 594 KAVVYNKILLGLCKRCEIDNA 614
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 48/277 (17%)
Query: 3 DTIS--NVYK-ILKYSTWDSAQDLLK-----NLPIKWDSY-TVNQVLKTHPPMEKAWLFF 53
DTIS V K + + WD A++LL N P ++ T +L +E+A +
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 411
Query: 54 NWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSN 113
+S G TY +++ F I S +F M K + +TYT+++ L N
Sbjct: 412 EQMS-EHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP---NTITYTTLLTGLCN 467
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
A +DGA + EM +C P +V++ + ++EA ++ ++M++ G PN T
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLIT 527
Query: 174 YTVLME-----------------------------------YLVRAGKYEEALEIFSKMQ 198
Y L++ L + + EEA+++F +Q
Sbjct: 528 YNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQ 587
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ G++P N ++ CK E I YM N
Sbjct: 588 DIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSN 624
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ---EKGINIDAVTYTSVMHWLSNAGDV 117
G + TY T+LD G K SS + EL+ KG++ D +T++S++ LS +
Sbjct: 520 GCTPNLITYNTLLD--GITKDCSS-EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRI 576
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ AV ++ ++ P V Y + L + A D + M+ G PN TY +L
Sbjct: 577 EEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIIL 636
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGV 202
+E L G +EA ++ S + GV
Sbjct: 637 IEGLAHEGLLKEAQDLLSVLCSRGV 661
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 54/109 (49%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + D T+++++ I + RI +F ++Q+ G+ AV Y ++ L ++D
Sbjct: 553 SKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEID 612
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
A++ + M C P +Y ++ L +KEA D+ + RG+
Sbjct: 613 NAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 186/480 (38%), Gaps = 84/480 (17%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ K+ S + ++NL I +D Y+ N ++ + L + + G+
Sbjct: 87 LSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 146
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T +++L+ + +KRIS + + M E G D VT+ +++H L AV
Sbjct: 147 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 206
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ ++M + C P +V+Y A + L + A + K+M + + + Y +++ L
Sbjct: 207 LVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 266
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ ++A +F+KM+ G++PD N LI C G +L M E ++
Sbjct: 267 KYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVV 326
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
F + F +K
Sbjct: 327 TFSALIDAF-------------------------------------------------VK 337
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+ LV + L ++ +SI D S++I C H R D A FE + D
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y LI K + E+ EM++ G +G+
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRG-------------LVGN--------------- 429
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T TY LI F AG D A KI+K M G+ P + T+++LL GL K G++ A
Sbjct: 430 -----TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 9/219 (4%)
Query: 11 ILKYSTWDSAQDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL N+ + S ++ +K +E L+ + RS +
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS--ID 357
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY+++++ F R+ K++FELM K + VTY +++ A V+ + +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+Y ++ LF A ++K+M+ G+PP+ TY++L++ L +
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
GK E+AL +F +Q++ ++PD NI+IE CKAG+
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 123/234 (52%), Gaps = 9/234 (3%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPM----EKAWLFFNWVSRSRGFN 63
+ KY D A L + I+ D +T N ++ + + L N + R N
Sbjct: 265 LCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK--IN 322
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
+ T++ ++D F + ++ + +++ M ++ I+ D TY+S+++ +D A ++
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+E M K+C+P +V+Y +K RV+E ++++EM QRGL N TY L++ L +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
AG + A +IF KM GV PD +IL++ CK G+ +++ Y++++++
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 91/168 (54%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++ F +AKR+ +F M ++G+ + VTY +++ L AGD D A I+++M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P I++Y+ + L ++++A V++ + + + P+ YTY +++E + +AGK
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
E+ ++F + GV+P+ +I C+ G + R MKE+
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+ F +S+ RG + TY T++ +A + +F+ M G+ D +TY+
Sbjct: 411 VEEGMELFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G ++ A+ ++E ++ + P I +Y ++ + +V++ D++ + +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI------------ 213
G+ PN YT ++ R G EEA +F +M+E G PD N LI
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAAS 589
Query: 214 -------EKCCKAGETRTIILILRYMKENRLALRY 241
C G+ TI +++ + + RL Y
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 153/369 (41%), Gaps = 32/369 (8%)
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
LN ++ +A ++ EM+Q P+ + L+ + + K++ + + +MQ + D
Sbjct: 56 LLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDL 115
Query: 207 AACNILIEKCCKAGETRTIILIL-RYMK---ENRLALRYPVFKEALQTFKVADENDSLLW 262
+ NILI C+ + + +L + MK E + + + +++D +
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 175
Query: 263 QVHPQFSPEFISDN-------------DAVEFVTTDIEGPLSID----QGLVLILLKKKN 305
V + P+ ++ N +AV V ++ D +V L K+ +
Sbjct: 176 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD 235
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+ SLL + I+ D + +TII+ C ++ D A F + + Y +
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------S 419
LI L + + ++ M + + V + LI + V A K++ S
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ P+ TY++LI + D+A +++ M K P++ T+N L+ G K RV
Sbjct: 356 IDPD----IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 480 SDA-EIYRK 487
+ E++R+
Sbjct: 412 EEGMELFRE 420
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L + +EKA + F ++ +S+ D +TY M++ +A ++ +F + KG+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ + YT+++ G + A ++ EMK P Y ++ + + ++
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELI 593
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA-LEIFS 195
KEM G + T ++++ ++ G+ E++ LE+ S
Sbjct: 594 KEMRSCGFVGDASTISMVIN-MLHDGRLEKSYLEMLS 629
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 180/473 (38%), Gaps = 54/473 (11%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
+Y D+A+ L+ ++P+ D+YT +VL + A + + R RG + TY
Sbjct: 122 RYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLR-RGCQPNVVTY 180
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T +L+ + V + M+ KG + VTY +++ + G VD A ++ +
Sbjct: 181 TVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFS 240
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
C P VSYT +K L + R + +++ EM+++ PN T+ +L+ + R G E
Sbjct: 241 YGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 300
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A+++ +M E + CNI+I CK G L M + L+
Sbjct: 301 AIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLK 360
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
A+ W + E + +N VT + + IL +K +
Sbjct: 361 GLCRAER-----WNDAKELLKEMVRNNCPPNEVTFNT---------FICILCQKGLIEQA 406
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
L+ + + + + ++ C D AL F M Y L+
Sbjct: 407 IMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFR---SMPCKPNTITYTTLLTG 463
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
L AE+V EM +H R P +
Sbjct: 464 LCNAERLDAAAELVAEM---------------LH------RDCPPNVV------------ 490
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T+ L+ + G D+A+++ + M G P+L T+N L G+ K DA
Sbjct: 491 TFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDA 543
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 86/178 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS + TYTT+L A+R+ + + M + + VT+ ++++ G +
Sbjct: 446 RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFL 505
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ + E+M C P +++Y + + ++A ++ ++ +G+ P+ T++ +
Sbjct: 506 DEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSI 565
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ L + + EEA+++F Q+ G++P N ++ CK E I L YM N
Sbjct: 566 IGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSN 623
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ---EKGINIDAVTYTSVMHWLSNAGDV 117
G + TY T+ D G K SS + EL+ KG++ D +T++S++ LS V
Sbjct: 519 GCTPNLITYNTLFD--GITKDCSS-EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRV 575
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ ++ + P + Y + L + A D M+ G PN TY +L
Sbjct: 576 EEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIIL 635
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGV 202
+E L R G +EA ++ S + GV
Sbjct: 636 IEGLAREGLLKEAQDLLSMLCSRGV 660
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + D T+++++ I + R+ +F L Q+ G+ A+ Y ++ L ++D
Sbjct: 552 SKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEID 611
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
A++ M C P +Y ++ L +KEA D+ + RG+
Sbjct: 612 NAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 145/337 (43%), Gaps = 22/337 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG DR T+T +++ A + V + M +KG+++D VTYT ++ G++
Sbjct: 384 QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNM 443
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + EM + P +V+YTA L V+ A ++ EM +GL N YTY L
Sbjct: 444 VEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSL 503
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L + G E+A+ I ++M+ AG + D LI+ CK+GE +L+ M + +
Sbjct: 504 INGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGI 563
Query: 238 ALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ + F +V L W + P ++ N ++ D
Sbjct: 564 KPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCID-------- 615
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
KN+ + + G+ + + + + +I+ +C R AL + ++
Sbjct: 616 ----------KNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIE 665
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
L L ++Y ALI +L K F + ++M G
Sbjct: 666 KGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEG 702
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 184/445 (41%), Gaps = 59/445 (13%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY TM+ + + + + + M KG+ +A YTSV+ L N G V A+ +
Sbjct: 286 DVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVL 345
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+M + V +T + + A +++EM +RGL + T+T L+ L RA
Sbjct: 346 EDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRA 405
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ +EA + +M + G+ D +LI+ CK G
Sbjct: 406 GELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNM---------------------- 443
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
++ F+V +E V + +P ++ ++ GL K+
Sbjct: 444 ---VEAFRVHNE------MVGRRVAPNVVTYT--------------ALSDGLC----KQG 476
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT--- 361
++ A + LL + +K ++L+ +++I C + A+ +M+ RT
Sbjct: 477 DVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIM---TEMEAAGHRTDVY 533
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y LI L K F + +++EM G + +L++ + R K+ +
Sbjct: 534 TYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWM 593
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
E + TY +L+ Y + +IYK M + + P+ T+N+L+ G K +
Sbjct: 594 LEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNM 653
Query: 480 SDAEIYRKE--KKSIQADALSKDAV 502
+A + +E +K ++ A S A+
Sbjct: 654 KEALYFHQEMIEKGLRLTASSYSAL 678
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 179/447 (40%), Gaps = 57/447 (12%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G + YT+++ + ++S V E M G+ +DAV +T+V+ + GD+
Sbjct: 315 AKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLA 374
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++EEM+ + V++TA + L +KEA V +EM+ +GL + TYTVL+
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLI 434
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + G EA + ++M V P+ L + CK G+ R +L M L
Sbjct: 435 DGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLE 494
Query: 239 LR---YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
L Y L F ++ ++ ++ E V TT
Sbjct: 495 LNVYTYNSLINGLCKFGNLEQAMRIMTEM------EAAGHRTDVYTYTT----------- 537
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ L K ++L ++DK I+ A + ++ C R +G E+ ++ +
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y L+K K + E+ K HS V
Sbjct: 598 VRPNVVTY----NSLMKQYCIDKNMKSTTEIYKGMHSQEV-------------------- 633
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
P + TY LI + A + +AL ++ M KG+ + +++ L+ L K
Sbjct: 634 -----APNEN----TYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNK 684
Query: 476 LGRVSDAEIY----RKEKKSIQADALS 498
+ S+A ++ R E + + D S
Sbjct: 685 KKKFSEARVFFDKMRNEGLTAEPDVYS 711
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 156/371 (42%), Gaps = 35/371 (9%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY-T 175
+D A+ ++ E+ K + S+ +K L R+K+A + EM PP+ TY T
Sbjct: 240 LDEAIALFRELPDK----NVCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGT 292
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++ Y VR G+ E A+++ +M G++ + +I C G+ + +L M +
Sbjct: 293 MVHGYCVR-GELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMH 351
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+AL VF + F + D L F E A + VT
Sbjct: 352 GVALDAVVFTTVISGF--CSKGD--LAAARRLFE-EMQKRGLAADRVT---------HTA 397
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ L + L D +L ++DK + +D + +I+ C +R + AF V +
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYC---KRGNMVEAFR--VHNE 452
Query: 356 LNLERTA-----YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ R A Y AL L K E++ EM G L VY LI+ L
Sbjct: 453 MVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGN 512
Query: 411 PVPAAKIFSLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A +I + + T TYT LI +G D+A + + M KGI PS+ T+NV
Sbjct: 513 LEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNV 572
Query: 469 LLAGLEKLGRV 479
L+ G GRV
Sbjct: 573 LMNGFCMSGRV 583
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 181/427 (42%), Gaps = 28/427 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKG--INIDAVTYTSVMHWLSNAGDVDGAVN 122
D F+Y+ +L + + + +M E G + D V Y++V+ GDV+ A +
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACD 240
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+++EM + P V+Y++ + L + +A ++M+ +G+ PN +TY L+
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLAL 239
G+++EA+ +F +M+ + PD ++L+ CK G E R + + +N
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVF 360
Query: 240 RYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQGLV 297
Y + T + D D + +P+ + N ++ + + +D+ ++
Sbjct: 361 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM-----LDKAMI 415
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ + + D ++ D T+I C + D A+ F + +
Sbjct: 416 --------------IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 461
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
++ AY LI + K E++ E+ G L + + +I+ L R + A I
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F L Y+ L+ Y G +KAL+++ M GI P+ + L+ G K
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581
Query: 476 LGRVSDA 482
+GR+ +
Sbjct: 582 IGRIDEG 588
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 173/425 (40%), Gaps = 47/425 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++++ +A+ + + M KG+ + TY ++++ S+ G
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +++EM+ P +V+ + M L ++KEA DV+ M +G PN ++YT+++
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLN 367
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G + ++F M G+ PD N+LI+ G ++I M+++ +
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
++ + + D + + + D A + I+G +
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL---IQGFCTHGS----- 479
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
LLK K L+ S IM+ + LD S+II C R A F+ +V + L+
Sbjct: 480 LLKAKELI------SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPT 533
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y L+ + K + + M AG
Sbjct: 534 AVVYSMLMDGYCLVGKMEKALRVFDAMVSAG----------------------------- 564
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ P D Y L+ Y G D+ L +++ M +KGI PS +N+++ GL + GR
Sbjct: 565 IEPND----VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 620
Query: 480 SDAEI 484
A++
Sbjct: 621 VPAKV 625
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 204/482 (42%), Gaps = 27/482 (5%)
Query: 12 LKYSTWDSAQDLLK-----NLPIKWDSYT-VNQVLKTHPPMEKAWLFFNWVSRSRGFNHD 65
K + A DL K +P + +Y+ V L M+KA F + ++G +
Sbjct: 230 FKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV-NKGVLPN 288
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
+TY ++ + + VF+ M+ I D VT + +M L G + A ++++
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
M +K P + SYT + + + TD++ M+ G+ P+ YT+ VL++ G
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
++A+ IF++M++ GV+PD +I C+ G+ + M + +A +
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+Q F + SLL + E IS E + + + ++ L K
Sbjct: 469 CLIQGFCT---HGSLLK------AKELIS-----EIMNNGMHLDIVFFSSIINNLCKLGR 514
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
++ ++ ++ + + V S +++ C + + AL F+ V + Y
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
L+ K+ + + EM + G L ++I L A R VPA F + E
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634
Query: 425 ---QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
KC TY ++ F D+A+ ++K + + ++ T N ++AG+ + RV +
Sbjct: 635 IAMNKC--TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEE 692
Query: 482 AE 483
A+
Sbjct: 693 AK 694
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G Y ++D EA R K F M E GI ++ TY V+ L D
Sbjct: 598 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDE 657
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++E++ I++ + +F RV+EA D++ + + GL P TY++++
Sbjct: 658 AIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMIT 717
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ G EEA ++FS MQ AG +PD N ++ + K E
Sbjct: 718 NLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 759
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 141/345 (40%), Gaps = 28/345 (8%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P +TY +LM+ RA + E AL F ++ G++ + N L++ C+A T
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDE 164
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDS--------LLWQVHPQFSPEFISDN 276
+ IL + + L VF ++ + D+ S ++ + SP+ ++ +
Sbjct: 165 ALDILLH-RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYS 223
Query: 277 DAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ E V I +V L K + + ++ L +++K
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ ++ + +I + A+ F+ + + + L+G L K +
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT--ALIGV 437
++ + M G + V+ ++++ + V +F L+ D YT LI
Sbjct: 344 RDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 403
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y + G DKA+ I+ M G+ P + T+ ++A L ++G++ DA
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 186/428 (43%), Gaps = 30/428 (7%)
Query: 65 DRFTYTTMLDIFGEAKR--ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D FTYT+M I G ++ + S VF M ++G + VTY+++++ L ++G V+ A +
Sbjct: 419 DTFTYTSM--ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 476
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDR--VKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM L PT ++T I+ L D ++A ++ +M +G PN YTYT L+
Sbjct: 477 LIREMILHGILPT--AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 534
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +G + A+ +F +M GV P+ N LI + + ++L M N L
Sbjct: 535 LCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTN 594
Query: 241 YPVFKEALQTFKV-ADENDSLLWQVHPQFSPEFISDNDAVEFVT--TDIEGPLSIDQGLV 297
+ E ++ + + D ++L + + VT T I+G D G
Sbjct: 595 IVTYNEMIKGYCILGDPKKAML------VMNNMLQRGHSANLVTYNTIIKG--YCDSG-- 644
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
N + +L + D + D + +I C + + A F V L
Sbjct: 645 -------NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 697
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y ALI K ++E M ++G V +LIH L A ++
Sbjct: 698 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 757
Query: 418 FSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++ E+ TYTA+I GS AL+++ M +G P+L T++ L+ L +
Sbjct: 758 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 817
Query: 476 LGRVSDAE 483
G+V +AE
Sbjct: 818 EGKVEEAE 825
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 167/366 (45%), Gaps = 14/366 (3%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+++ K D ++ +++ ME A+ FN + G + TYT ++D + +
Sbjct: 654 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD-GLCPNEVTYTALIDGYCK 712
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+++ + + E M+ G + TY ++H L+ + GA + + M + +P +V+
Sbjct: 713 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 772
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YTA + L N A +++ +MI++G PN TY+ L+ L + GK EEA +F++++
Sbjct: 773 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 832
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQT-FKVA 254
G+ PD+ +IE +G+ L M + Y V + L+ + +A
Sbjct: 833 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 892
Query: 255 DENDSLLWQVHPQFSPEF-ISDNDAVEFVT---TDIEGPLS--IDQGLVLILLKKKNLVA 308
D+ + L V P S + +D DAV ++ +++ LS + LV L
Sbjct: 893 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 952
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ LL ++ + + D ++++ R D A+ F++ + Y LI
Sbjct: 953 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 1012
Query: 369 ILIKLN 374
L +L+
Sbjct: 1013 ALCQLH 1018
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 4/203 (1%)
Query: 35 TVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N+++K + + +KA L N + + RG + + TY T++ + ++ +S + +L
Sbjct: 597 TYNEMIKGYCILGDPKKAMLVMNNMLQ-RGHSANLVTYNTIIKGYCDSGNTTSALRILDL 655
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M++ G D +YT ++ ++ A ++ EM P V+YTA + +++
Sbjct: 656 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 715
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ AT + + M + G PN TY VL+ L + + A E+ M E G+ P+
Sbjct: 716 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 775
Query: 212 LIEKCCKAGETRTIILILRYMKE 234
+I+ CK G T + + M E
Sbjct: 776 MIDGLCKNGSTSLALEMFNKMIE 798
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/391 (19%), Positives = 159/391 (40%), Gaps = 20/391 (5%)
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+++ + G+ + Y++++ LS G ++ + M + P ++ Y A + L
Sbjct: 338 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 397
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ V +A + K++ + + P+ +TYT ++ R + AL++F++M + G +P+
Sbjct: 398 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 457
Query: 209 CNILIEKCCKAGETRTIILILRYM-KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+ LI C +G ++R M L + + + D+ W++
Sbjct: 458 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA--WRLFVD 515
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+ N V T I G L + GL+ + + + ++ D G+ ++ + A+
Sbjct: 516 MKNKGCEPN--VYTYTALISG-LCV-SGLLKVAIGLFHRMSRD----GVFPNTVTYN-AL 566
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
I+ ++E +RR A + + L Y +I L K ++ M
Sbjct: 567 INILVE----NRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNML 622
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSA 444
+ GHS + +I + A +I L+ D C +YT LI +
Sbjct: 623 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKM 681
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ A ++ M G+ P+ T+ L+ G K
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 712
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 95/474 (20%), Positives = 174/474 (36%), Gaps = 41/474 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M + F + +S+S G F Y+ +L +++ + M +G+ + + Y
Sbjct: 331 MARTMSFLDMLSQS-GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYN 389
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+V++ L G+V A I +++ E P +YT+ + + A V+ +M +
Sbjct: 390 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 449
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY+ L+ L +G+ EA ++ +M G+ P C I C G
Sbjct: 450 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 509
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS----PEFISDNDAVEF 281
+ MK + + V+ + H P ++ N +
Sbjct: 510 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 569
Query: 282 VTTDIEGPLSIDQGLVLILLKKK-----NLVAIDSLLSG------------IMDKSIQLD 324
+ + I V++ L + N+V + ++ G +M+ +Q
Sbjct: 570 LVENRR----IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 625
Query: 325 SA----VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
+ +TII+ CD AL + + +Y LI K++
Sbjct: 626 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 685
Query: 381 EIVEEMTKAGHSLGVYLGALLI------HRLGSARRPVPAAKIFSLLPEDQKCTATYTAL 434
+ EM G LI +L +A + K P Q TY L
Sbjct: 686 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ----TYNVL 741
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
I + A ++ K M +GI P++ T+ ++ GL K G S A E++ K
Sbjct: 742 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 795
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +G+ D Y S++ L +VD A+ +++ M + C + Y + L R
Sbjct: 960 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 1019
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
KEA ++ M+ R P+ VL++ L+R G + +E M+ P
Sbjct: 1020 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 1072
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 192/450 (42%), Gaps = 59/450 (13%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
TVN ++ + + + ++ + + GF D+ TY T ++ + + V ++M
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
++G + D TY V++ L G ++ A I +M + C P I ++ + L +R+
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA D+ +++ +GL P+ YT+ +L+ L + G + AL +F +M+ +G PD+ N L
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436
Query: 213 IEKCCKAGETRTIILILRYMKEN---RLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
I+ C G+ + +L+ M+ R + Y + L +E + +V Q
Sbjct: 437 IDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAE----EVFDQMD 492
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
+ IS N A+ F T I+G L K K + + L+S ++ + +Q ++ +
Sbjct: 493 LQGISRN-AITF-NTLIDG-----------LCKDKRIDDANQLISQMISEGLQPNNITYN 539
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
+I+ C K K A+I++ MT
Sbjct: 540 SILTHYC-----------------------------------KQGDIKKAADILQTMTAN 564
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKA 447
G + V LI+ L A R A K+ + + + T Y +I F + A
Sbjct: 565 GFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDA 624
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ +++ M G P T+ ++ GL + G
Sbjct: 625 MNLFREMTEVGEPPDAFTYKIVFRGLCRGG 654
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 170/439 (38%), Gaps = 61/439 (13%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
L N + G D Y +L++ E ++ ++ V+ M E+GI D VT+ ++M
Sbjct: 135 LVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKA 194
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L A V AV + EEM P ++T M+ +K A V M++ G P
Sbjct: 195 LCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPT 254
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
T VL+ + G+ E+AL + G +PD+ N + C+ G + ++
Sbjct: 255 KVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMD 314
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
M V P+ + N V
Sbjct: 315 VM-------------------------------VQEGHDPDVFTYNIVVN---------- 333
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL-LAFE 349
L K L +L+ ++++ D +T+I C R + AL LA +
Sbjct: 334 --------CLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQ 385
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVA-EIVEEMTKAGHSLGVYLGALLIHRLGSA 408
++K L+ + + LI L K+ P++A + EEM +G + LI L S
Sbjct: 386 VTLK-GLSPDVYTFNILINALCKVGD-PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443
Query: 409 RRPVPAAKIFSLLPEDQ-----KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ K LL E + + T TY +I ++A +++ M +GI +
Sbjct: 444 GK---LGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 500
Query: 464 GTFNVLLAGLEKLGRVSDA 482
TFN L+ GL K R+ DA
Sbjct: 501 ITFNTLIDGLCKDKRIDDA 519
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 156/395 (39%), Gaps = 61/395 (15%)
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
GI D V Y +++ L + ++ EM + P +V++ MK L +V+ A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ +EM G+ P+ T+T LM+ V G + AL + ++M E G P K N+LI
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
CK G +V D + ++ F P+ I+
Sbjct: 265 YCKLG-------------------------------RVEDALGYIQQEIANGFEPDQITY 293
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ--LDSAVISTIIE 333
N V + + G V LK +MD +Q D V + I
Sbjct: 294 NTFVNGLCQN---------GHVGHALK-------------VMDVMVQEGHDPDVFTYNIV 331
Query: 334 VNC--DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
VNC + + + A V+ + T + LI L N + ++ ++T G
Sbjct: 332 VNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGL 391
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKAL 448
S VY +LI+ L P A ++F + + CT TY LI S G KAL
Sbjct: 392 SPDVYTFNILINALCKVGDPQLALRLFEEM-KSSGCTPDEVTYNTLIDNLCSLGKLGKAL 450
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ K M G S T+N ++ GL K R+ +AE
Sbjct: 451 DLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAE 485
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 18 DSAQDLLKNLPIKW---DSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
+ A DL + + +K D YT +N + K P LF +S G D TY
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM--KSSGCTPDEVTYN 434
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T++D ++ + + M+ G VTY +++ L ++ A ++++M L+
Sbjct: 435 TLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQ 494
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+++ + L + R+ +A + +MI GL PN TY ++ + + G ++A
Sbjct: 495 GISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKA 554
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+I M G + D LI CKAG T+ + +LR M+
Sbjct: 555 ADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMR 597
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T+T L+ + GS AL++ M G P+ T NVL+ G KLGRV DA Y +++
Sbjct: 222 TFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQE 281
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 179/465 (38%), Gaps = 52/465 (11%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYT 70
+Y D+A+ L+ ++P+ D+YT +++ + + + RG TYT
Sbjct: 125 RYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 184
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L+ ++ V + M+ KG + VTY +++ + G VD A +
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P VSYT +K L R ++ +++ EM+++ PN T+ +L+ + R G E A
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+++ +M G + CNI+I CK G L M + + L+
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
A+ W+ + E + N VT + + IL +K +
Sbjct: 365 LCRAER-----WEDAKELLKEMVRKNCPPNEVTFNT---------FICILCQKGLIEQAT 410
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
L+ + + +++ + ++ C R D AL F YS+ N Y L+ L
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF-YSMPCKPNT--ITYTTLLTGL 467
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
AE++ EM + + V T
Sbjct: 468 CNAERLDAAAELLAEMLQKDCAPNV---------------------------------VT 494
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ L+ + G D+A+++ + M G P+L T+N LL G+ K
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 539
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 176/418 (42%), Gaps = 18/418 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y T++ + R + L+ + DA TYT ++ L + G V A+++
Sbjct: 112 DVFAYNTLVAGYC---RYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLL 168
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M + C P++V+YT ++ + + +A +V EM +G PN TY V++ + R
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ ++A E +++ G QPD + +++ C A + + M E F
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
++ F + + QV Q S + N + + + + K+
Sbjct: 289 DMLVRFFCRGGMVERAI-QVLEQMSGHGCAANTTLCNIVINT-------------ICKQG 334
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ L+ + D+ +T+++ C R + A + V+ + +
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
I IL + + ++E+M++ G + + L++ R A ++F +P
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 454
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T TYT L+ +A D A ++ M +K P++ TFNVL++ + G + +A
Sbjct: 455 PN-TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 164/433 (37%), Gaps = 89/433 (20%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F N +S S GF D +YTT+L AKR ++ +F M EK + VT+
Sbjct: 231 VDDAREFLNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 106 SVMHWLSNAGDVDGAVNIWEEMK------------------LKE---------------- 131
++ + G V+ A+ + E+M K+
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 132 -CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P +SYT +K L +R ++A ++ KEM+++ PPN T+ + L + G E+A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM--KEN------------- 235
+ +M E G + + N L+ C G + + + M K N
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 469
Query: 236 --RLALRYPVFKEALQ--------TFKV----------ADENDSLLWQVHPQ-FSPEFIS 274
RL + E LQ TF V DE L+ Q+ +P I+
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 529
Query: 275 DNDAVEFVTTDI--EGPLSIDQGLVL---------------ILLKKKNLVAIDSLLSGIM 317
N ++ +T D E L + GLV +L ++ + + +
Sbjct: 530 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 589
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
D ++ + + + I+ C DGA+ F Y V Y+ LI L +
Sbjct: 590 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 649
Query: 378 KVAEIVEEMTKAG 390
+ +++ E+ G
Sbjct: 650 ETRDLLRELCSRG 662
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 24/260 (9%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEK----AWLFFNWVSRSRGFNHDRFTYTTML 73
DSA +L ++P K ++ T +L E+ A L + + N T+ ++
Sbjct: 442 DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV--VTFNVLV 499
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
F + + + E M E G + +TY +++ ++ + + A+ + +
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 559
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P IV+Y++ + +L DRV+EA ++ + G+ P Y ++ L + + A++
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 619
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
F+ M G P++ LIE A E ++KE R LR + L
Sbjct: 620 FAYMVSNGCMPNELTYITLIEG--LANED--------FLKETRDLLRELCSRGVL----- 664
Query: 254 ADENDSLLWQVHPQFSPEFI 273
N +LL + P+FS + +
Sbjct: 665 ---NKNLLEEWRPKFSNQTV 681
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
Q TYT L+ + +A+++ M KG P++ T+NV++ G+ + GRV DA
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 485 Y--RKEKKSIQADALSKDAV 502
+ R Q D +S V
Sbjct: 237 FLNRLSSYGFQPDTVSYTTV 256
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 188/489 (38%), Gaps = 88/489 (17%)
Query: 37 NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR--------------- 81
+VL+ + AW FF W GF H+ +T +L+ F +AKR
Sbjct: 47 GRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPL 106
Query: 82 -----------------ISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ FEL M+E+G+ +D + +++++ L G +D A+
Sbjct: 107 CFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEAL 166
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-----GLPPNCYTYTV 176
++ M +EC P +++Y + L +R+ EA +++ +M +R G P+ +Y+
Sbjct: 167 EQFKSMG-EECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYST 225
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
+++ L +A + ++A E F +M+ G P+ + LI+ CK + +L +MKE
Sbjct: 226 VIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKG 285
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ F L DE + QF + VT ++
Sbjct: 286 FGINIIDFNAMLHALWKNDEQEKAC-----QFFERLLKSGKKPNVVTYNVA--------- 331
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
V L K + +L +++ + D S+II+ C R D A F + +
Sbjct: 332 VHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 391
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
++ L+ + + + E+M AG G+
Sbjct: 392 IPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGL--------------------- 430
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
TY L+ A S + AL+IY M RK P T+ L+ L +
Sbjct: 431 ------------QTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRA 478
Query: 477 GRVSDAEIY 485
RV +A+ +
Sbjct: 479 RRVDEAKEF 487
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 187/452 (41%), Gaps = 22/452 (4%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSR---SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
VN + K + E LF + R S G D +Y+T++D +A+R+ F+ M
Sbjct: 187 VNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM 246
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ G + VTY+S++ L + + MK K I+ + A + L+ ND
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++A ++ +++ G PN TY V + L +AG+ +EA I +M E+ V PD + +
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPV-FKEALQTFKVADENDSLLWQVHPQFSPE 271
I+ CKAG + M + + +PV F L F ++ +
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHE-CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
FI + + G S++ L + K+ K Q D + +
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKR--------------KKRQPDCNTYAPL 471
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG- 390
I+ C RR D A + ++ AL+ +L K + +++ + + G
Sbjct: 472 IQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGC 531
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
LG +L+ L ++ A+K+ P ATY+ + AG D+A+++
Sbjct: 532 QPLGETF-KILVEELYLRKKWEAASKLLRS-PGFVADAATYSLCVAEICKAGKPDEAVEV 589
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ M KG+ P GT+ +L L L RV A
Sbjct: 590 IEQMVLKGVRPDEGTYVAVLRSLCGLDRVESA 621
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 134/333 (40%), Gaps = 27/333 (8%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY++++D F +A R+ VF M VT+ +++H S A +
Sbjct: 359 DVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVH 418
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+M P + +Y M + D V+ A ++Y +M ++ P+C TY L++ L RA
Sbjct: 419 EDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRA 478
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+ +EA E M+ V P+ A C+ L+E CK GE +L + E V
Sbjct: 479 RRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE--------VG 530
Query: 245 KEAL-QTFKVADENDSLL--WQVHPQF--SPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L +TFK+ E L W+ + SP F++D +I D+ + +I
Sbjct: 531 CQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVI 590
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
++ K ++ D ++ C R + A+ FE
Sbjct: 591 --------------EQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPG 636
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
Y LIG + + I E M AG +
Sbjct: 637 LVTYTLLIGEACSADMADEAFRIFEAMVAAGFT 669
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 169/452 (37%), Gaps = 31/452 (6%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S ++ + K P E L + + +GF + + ML + FE +
Sbjct: 259 SSLIDGLCKVDRPSECLELLLHM--KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 316
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ G + VTY +H L AG VD A I EM + P +++Y++ + R+
Sbjct: 317 LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 376
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+A DV+ M+ P+ T+ L+ K EA + M AG P N+L
Sbjct: 377 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 436
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
++ C A + + I MK + + +Q A D + EF
Sbjct: 437 MDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDE---------AKEF 487
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+ +A V +I LV +L K+ + S+L +++ Q ++
Sbjct: 488 LDVMEADNVVPNG-----AICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542
Query: 333 EVNCDHRRRDGA--LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
E ++ + A LL V + Y + + K + E++E+M G
Sbjct: 543 EELYLRKKWEAASKLLRSPGFVA-----DAATYSLCVAEICKAGKPDEAVEVIEQMVLKG 597
Query: 391 --HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSAD 445
G Y+ L L R A F + + C TYT LIG SA AD
Sbjct: 598 VRPDEGTYVAVL--RSLCGLDRVESAIAEFEKMA-SRGCAPGLVTYTLLIGEACSADMAD 654
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+A +I++ M G P T L + L G
Sbjct: 655 EAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 200/481 (41%), Gaps = 60/481 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF D TY ++L F + +K V++ MQ+ G D +TY +++H G +D
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 120 AVNIWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++++MK L P ++YT + L +R EA + EM+ G+ P TY+ L+
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI------------- 225
+AGK EEA + FS M +G +PD A +++++ + ETR
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
Query: 226 -------ILILRYMKENR------------------------LALRYPVFKEALQTFKVA 254
++IL MKENR + ++ F A + KVA
Sbjct: 541 PSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVA 600
Query: 255 D------ENDSLLWQVHPQFSPEFISDN-DAVEFVTTDIEGPLS-IDQGLVLILLKKKNL 306
END+LL + S S+ + +EF+ G I + L+++ K NL
Sbjct: 601 ITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNL 660
Query: 307 -VAIDSLLSGIMDKSIQLDSAVI-STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
A+D + S+ + T++ + A F +
Sbjct: 661 SAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCK 720
Query: 365 ALIGILIKLNTFPKVAEIV--EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
+++ + KL FP+ A V + TK H + +I G + A + L
Sbjct: 721 SMVVVYCKLG-FPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLR 779
Query: 423 EDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+ + T+ +L+ Y G ++A I+ TM R G P++ + N+LL L GR+
Sbjct: 780 QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLE 839
Query: 481 D 481
+
Sbjct: 840 E 840
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYV--FELMQEKGINIDAVTYTSVMHWLSNAG 115
R RG D ++ T+++ ++ ++ V ++++ G+ DA+TY +++ S
Sbjct: 252 RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS 311
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++DGAV ++E+M+ C P + +Y A + + EA ++ E+ +G P+ TY
Sbjct: 312 NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 371
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK-- 233
L+ R E+ E++ +MQ+ G D+ N +I K G+ + + + MK
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 234 --ENRLALRYPVFKEAL 248
N A+ Y V ++L
Sbjct: 432 SGRNPDAITYTVLIDSL 448
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 169/400 (42%), Gaps = 26/400 (6%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT +++ +G+ K + V +++ G D T+ S+M + G + A I+ M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
PT+ S + L ++ R++E V +E+ G + + ++++ RAG
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
E +I+S M+ AG P ++IE CK R +++ M+E + ++ L
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 249 QTFKVADENDSLLWQVHPQ-----FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + ++ + QV+ + P+ + N + D ++G L++ +
Sbjct: 935 KMYTAIEDYKKTV-QVYQRIKETGLEPDETTYNTLIIMYCRDRRP----EEG-YLLMQQM 988
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+NL +D + ++IS + C + A FE + L L+R+ Y
Sbjct: 989 RNLG---------LDPKLDTYKSLISAFGKQKC----LEQAEQLFEELLSKGLKLDRSFY 1035
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-- 421
++ I + K ++++ M AG + LL+ S+ P A K+ S L
Sbjct: 1036 HTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKD 1095
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
E + T Y+++I Y + + ++ M ++G+ P
Sbjct: 1096 TEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEP 1135
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/407 (19%), Positives = 155/407 (38%), Gaps = 40/407 (9%)
Query: 99 IDAVTYTSVMHWLS-NA---GDVDGAVNIWEEMKL-----KECYPTIVS----YTAYMKI 145
++ + ++ HW S NA + G + W + L PT+ Y A M +
Sbjct: 175 LEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGV 234
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE--ALEIFSKMQEAGVQ 203
+ + +A ++ M QRG P+ ++ L+ +++G A+E+ ++ +G++
Sbjct: 235 YSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR 294
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSL 260
PD N L+ C + + + M+ +R + + + +A E + L
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 261 LWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
++ + F P+ ++ N L+ +++N + + +
Sbjct: 355 FMELELKGFFPDAVTYN------------------SLLYAFARERNTEKVKEVYQQMQKM 396
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD-LNLERTAYLALIGILIKLNTFPK 378
D +TII + + D AL ++ + N + Y LI L K N +
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIG 436
A ++ EM G + + LI A + A FS L + Y+ ++
Sbjct: 457 AAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
V KA +Y+ M G PS + +++ GL K R D +
Sbjct: 517 VLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQ 563
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 8/226 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G + TY +++ FG+ K + + +FE + KG+ +D Y ++M ++G
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + + MK PT+ + M + +EA V + + Y+ +
Sbjct: 1049 SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSV 1108
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +R+ Y +E +M++ G++PD + + E ++L+L+ +++ +
Sbjct: 1109 IDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALED--I 1166
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
P+ A + + E D ++ I DN A+ FV
Sbjct: 1167 GFDLPIRLLAGRPELLVSEVDGWFEKLKS------IEDNAALNFVN 1206
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 5/181 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + + MLD F A I +K ++ M+ G Y ++ L V A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ + + + +K+ + K+ VY+ + + GL P+ TY L+
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGETRTIILILRYMKEN 235
R + EE + +M+ G+ P LI +KC + E L+ + +K +
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 236 R 236
R
Sbjct: 1032 R 1032
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 200/481 (41%), Gaps = 60/481 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF D TY ++L F + +K V++ MQ+ G D +TY +++H G +D
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 120 AVNIWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++++MK L P ++YT + L +R EA + EM+ G+ P TY+ L+
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI------------- 225
+AGK EEA + FS M +G +PD A +++++ + ETR
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
Query: 226 -------ILILRYMKENR------------------------LALRYPVFKEALQTFKVA 254
++IL MKENR + ++ F A + KVA
Sbjct: 541 PSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVA 600
Query: 255 D------ENDSLLWQVHPQFSPEFISDN-DAVEFVTTDIEGPLS-IDQGLVLILLKKKNL 306
END+LL + S S+ + +EF+ G I + L+++ K NL
Sbjct: 601 ITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNL 660
Query: 307 -VAIDSLLSGIMDKSIQLDSAVI-STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
A+D + S+ + T++ + A F +
Sbjct: 661 SAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCK 720
Query: 365 ALIGILIKLNTFPKVAEIV--EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
+++ + KL FP+ A V + TK H + +I G + A + L
Sbjct: 721 SMVVVYCKLG-FPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLR 779
Query: 423 EDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+ + T+ +L+ Y G ++A I+ TM R G P++ + N+LL L GR+
Sbjct: 780 QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLE 839
Query: 481 D 481
+
Sbjct: 840 E 840
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYV--FELMQEKGINIDAVTYTSVMHWLSNAG 115
R RG D ++ T+++ ++ ++ V ++++ G+ DA+TY +++ S
Sbjct: 252 RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS 311
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++DGAV ++E+M+ C P + +Y A + + EA ++ E+ +G P+ TY
Sbjct: 312 NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 371
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK-- 233
L+ R E+ E++ +MQ+ G D+ N +I K G+ + + + MK
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 234 --ENRLALRYPVFKEAL 248
N A+ Y V ++L
Sbjct: 432 SGRNPDAITYTVLIDSL 448
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 169/400 (42%), Gaps = 26/400 (6%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT +++ +G+ K + V +++ G D T+ S+M + G + A I+ M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
PT+ S + L ++ R++E V +E+ G + + ++++ RAG
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
E +I+S M+ AG P ++IE CK R +++ M+E + ++ L
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 249 QTFKVADENDSLLWQVHPQ-----FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + ++ + QV+ + P+ + N + D ++G L++ +
Sbjct: 935 KMYTAIEDYKKTV-QVYQRIKETGLEPDETTYNTLIIMYCRDRRP----EEG-YLLMQQM 988
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+NL +D + ++IS + C + A FE + L L+R+ Y
Sbjct: 989 RNLG---------LDPKLDTYKSLISAFGKQKC----LEQAEQLFEELLSKGLKLDRSFY 1035
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-- 421
++ I + K ++++ M AG + LL+ S+ P A K+ S L
Sbjct: 1036 HTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKD 1095
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
E + T Y+++I Y + + ++ M ++G+ P
Sbjct: 1096 TEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEP 1135
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/407 (19%), Positives = 155/407 (38%), Gaps = 40/407 (9%)
Query: 99 IDAVTYTSVMHWLS-NA---GDVDGAVNIWEEMKLK-----ECYPTIVS----YTAYMKI 145
++ + ++ HW S NA + G + W + L PT+ Y A M +
Sbjct: 175 LEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGV 234
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE--ALEIFSKMQEAGVQ 203
+ + +A ++ M QRG P+ ++ L+ +++G A+E+ ++ +G++
Sbjct: 235 YSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR 294
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSL 260
PD N L+ C + + + M+ +R + + + +A E + L
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 261 LWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
++ + F P+ ++ N L+ +++N + + +
Sbjct: 355 FMELELKGFFPDAVTYN------------------SLLYAFARERNTEKVKEVYQQMQKM 396
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD-LNLERTAYLALIGILIKLNTFPK 378
D +TII + + D AL ++ + N + Y LI L K N +
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIG 436
A ++ EM G + + LI A + A FS L + Y+ ++
Sbjct: 457 AAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
V KA +Y+ M G PS + +++ GL K R D +
Sbjct: 517 VLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQ 563
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 8/226 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G + TY +++ FG+ K + + +FE + KG+ +D Y ++M ++G
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + + MK PT+ + M + +EA V + + Y+ +
Sbjct: 1049 SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSV 1108
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +R+ Y +E +M++ G++PD + + E ++L+L+ +++ +
Sbjct: 1109 IDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALED--I 1166
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
P+ A + + E D ++ I DN A+ FV
Sbjct: 1167 GFDLPIRLLAGRPELLVSEVDGWFEKLKS------IEDNAALNFVN 1206
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 5/181 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + + MLD F A I +K ++ M+ G Y ++ L V A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ + + + +K+ + K+ VY+ + + GL P+ TY L+
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGETRTIILILRYMKEN 235
R + EE + +M+ G+ P LI +KC + E L+ + +K +
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 236 R 236
R
Sbjct: 1032 R 1032
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 4/204 (1%)
Query: 32 DSYTVNQVLKTHPPMEKAW---LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D +T N ++ H KA L F + +GF D TY ++L F + + ++ V
Sbjct: 327 DLWTYNAMVSVHGRCGKAQEAELMFKELV-EKGFQPDAVTYNSLLYAFAKEGDVERVERV 385
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
E + + G D +TY +++H G +D A+ +++EM+ C P V+YT + L
Sbjct: 386 CEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGK 445
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
DR+ EA V +EM GL P T++ L+ ++G+ ++A F +M E+GV+PD+ A
Sbjct: 446 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLA 505
Query: 209 CNILIEKCCKAGETRTIILILRYM 232
++++ ++ ETR ++++ R M
Sbjct: 506 YLVMLDVFARSDETRKLMVLYRAM 529
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D TY TM+ ++G+ R+ +++ M+ G DAVTYT ++ L + A
Sbjct: 393 GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 452
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EEM PT+V+++A + + R +A + M++ G+ P+ Y V+++
Sbjct: 453 GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 512
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
R+ + + + ++ M + G +PD +L+ K E I +++ M+
Sbjct: 513 FARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 565
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNA 114
R + D ++ T+++ ++ +++ EL+ E G+ DA+TY +++ S
Sbjct: 248 RDQDIEPDLVSFNTLINARAKSGCLAA-GVALELLHEVRQAGLRPDAITYNTLISACSQG 306
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
++D AV ++EEM EC P + +Y A + + + +EA ++KE++++G P+ TY
Sbjct: 307 SNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTY 366
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L+ + G E + ++ +AG + D N +I K G
Sbjct: 367 NSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMG 412
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/435 (19%), Positives = 164/435 (37%), Gaps = 62/435 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG--AVNIWE 125
+ M+ ++ + R + + + M+++ I D V++ ++++ + +G + A+ +
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLH 282
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
E++ P ++Y + + +A V++EMI P+ +TY ++ R G
Sbjct: 283 EVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCG 342
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNIL------------IEKCC----KAGETRTII--- 226
K +EA +F ++ E G QPD N L +E+ C KAG + I
Sbjct: 343 KAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYN 402
Query: 227 -LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+I Y K RL L ++ E +P DAV +
Sbjct: 403 TMIHMYGKMGRLDLALGLYDEMRAI----------------GCTP------DAVTYTV-- 438
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
LV L K + +L + D ++ S +I R+D A
Sbjct: 439 ----------LVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAE 488
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ V+ + +R AYL ++ + + + K+ + M K G+ L +L+ L
Sbjct: 489 RTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAAL 548
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALI--GVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ +D + L+ + A + + K C +G P
Sbjct: 549 AKGNEHDEIEGVI----QDMEAVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDG 604
Query: 464 GTFNVLLAGLEKLGR 478
+ +L EK+G+
Sbjct: 605 KSLLSILDAYEKMGK 619
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G D TYT ++D G+ RIS V E M + G+ VT+++++ + +G
Sbjct: 425 RAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQ 484
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++ M P ++Y + + +D ++ +Y+ MI+ G P+ Y VL
Sbjct: 485 DDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVL 544
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ L + +++E + M+ +ILI+ C
Sbjct: 545 LAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAEC 584
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R+ + V + +Q+ I I T ++ + AGDV + I+ MK P + Y
Sbjct: 832 RLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYR 891
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ +L N R ++ + EM G P+ L+ G ++ +E++ + EA
Sbjct: 892 IMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEA 951
Query: 201 GVQPDKAACNILI 213
G++PD+ N LI
Sbjct: 952 GLEPDEDTYNTLI 964
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 2/202 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG +Y +L G+AK +FE M+ KG ++ Y +M NA +
Sbjct: 986 RGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSK 1045
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ MK PTI + M + EA V + L + Y+ +++
Sbjct: 1046 AEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 1105
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+R Y + +M+ GV+PD I +T IL+L+ +++ L
Sbjct: 1106 AYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDL 1165
Query: 240 RYPVFKEALQTFKVADENDSLL 261
+ E +T + E DS L
Sbjct: 1166 PIRLLTE--RTSSLFTEVDSFL 1185
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 159/393 (40%), Gaps = 43/393 (10%)
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL--NDRV 152
+G D + S++ G + +++ E +++ P + + I+ L N ++
Sbjct: 598 QGYEPDGKSLLSILDAYEKMGKHEKGLSLLEW--IRQHVPNSHNLISECSIMLLCKNGKI 655
Query: 153 KEATDVY--KEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+A Y K+M++RG +C Y L+ YL A + EA ++F MQ G+ P +
Sbjct: 656 VDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKVF 715
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
I +CC+ G T ++ + ++L + A+ + LWQ F
Sbjct: 716 PSFIFQCCRLGFPETAYQLMDDAARSDISLNILSCRVAM----IEAYGKLKLWQQAENFV 771
Query: 270 PEFISDNDAVEFVTTDI------EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
++ + + G + + I++KK L ++S ++G+M +++ +
Sbjct: 772 KGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVES-VNGMM-RALIV 829
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D R D + + +D+ + ++ L ++ K +V +I
Sbjct: 830 DG--------------RLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIY 875
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARR------PVPAAKIFSLLPEDQKCTATYTALIGV 437
M AG+ ++L ++I L +R V + P+ L+ +
Sbjct: 876 NGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPD----LVVLNTLLLM 931
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
Y G+ D+ +++Y ++ G+ P T+N L+
Sbjct: 932 YTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLI 964
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 80/178 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G+ + Y M+ + KR ++ + M+ G D V +++ + G+
Sbjct: 879 KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNF 938
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D + ++ + P +Y + + N R +E + EM +RGL P +Y +L
Sbjct: 939 DRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKIL 998
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ +A +E+A +F +M+ G + +++ +++++ A +L MKE+
Sbjct: 999 LAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKED 1056
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 121/332 (36%), Gaps = 53/332 (15%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A DV+ + G + +M R+G++++A ++ M++ ++PD + N LI
Sbjct: 207 AEDVFLRFAREG--ATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLIN 264
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
K+G L V E L + A P+ I+
Sbjct: 265 ARAKSG-----------------CLAAGVALELLHEVRQAG------------LRPDAIT 295
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
N + + QG NL ++ ++ + D + ++ V
Sbjct: 296 YNTLIS----------ACSQG--------SNLDDAVAVFEEMIASECRPDLWTYNAMVSV 337
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
+ + A L F+ V+ + Y +L+ K +V + EE+ KAG
Sbjct: 338 HGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKD 397
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIY 451
+IH G R A ++ + CT TYT L+ +A K+
Sbjct: 398 GITYNTMIHMYGKMGRLDLALGLYDEM-RAIGCTPDAVTYTVLVDSLGKMDRISEAGKVL 456
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ M G+ P+L TF+ L+ K GR DAE
Sbjct: 457 EEMADAGLKPTLVTFSALICAYAKSGRQDDAE 488
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+A L F + R++G+ +R Y M+ I+ A+ S +++ M+E GI T
Sbjct: 1009 EQADLLFEEM-RTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHI 1067
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M +G D A + +K + + Y+ + N EM + G
Sbjct: 1068 LMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDG 1127
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ P+ +T + + ++A+ + +Q+ G
Sbjct: 1128 VEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCG 1162
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 185/451 (41%), Gaps = 34/451 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY+T++D +A+ + + V + M +KG+ D VTY +++ L A VD
Sbjct: 228 KGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDR 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + + M K P +V+Y + L V A V + MI + + P+ TY L+
Sbjct: 288 AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIH 347
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G+++E + +M G+ PD ++L++ CK G+ I M +
Sbjct: 348 GYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP 407
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
++ L + +AD D L V SP +N V ID+
Sbjct: 408 NVTIYGILLHGYAARGAIADLTDLLDLMVANGISP----NNYIFNIVLCAYAKKAMIDEA 463
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ + S + + D +I+ C R D A+L F +
Sbjct: 464 M--------------HIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS------AR 409
+ + +L+ L ++ + K E+ EM G V ++ L + A+
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQ 569
Query: 410 RPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
R + + + + P +Y LIG + AG D+A ++ M G+ P L +++ L
Sbjct: 570 RLIDSMERVGVRPN----VISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTL 625
Query: 470 LAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
L G K GR+ +A +E +K + A++
Sbjct: 626 LRGYCKTGRIDNAYCLFREMLRKGVTPGAVT 656
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 190/466 (40%), Gaps = 63/466 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY T++D +A+ + V + M +K + D TY ++H + G+
Sbjct: 298 KGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKE 357
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
V EEM + P +V+Y+ + L N + EA ++ MI++G+ PN Y +L+
Sbjct: 358 VVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLH 417
Query: 180 -YLVRAG----------------------------------KYEEALEIFSKMQEAGVQP 204
Y R +EA+ IFS+M + G+ P
Sbjct: 418 GYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSP 477
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE---ALQTFKVADENDSLL 261
D ILI+ CK G +L M + + VF L T ++ + L
Sbjct: 478 DVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELF 537
Query: 262 WQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
+++ Q P + N + + EG + + Q L IDS+ +
Sbjct: 538 FEMWDQGVRPNVVFFNTIMCNLCN--EGQVMVAQRL------------IDSM------ER 577
Query: 321 IQLDSAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ + VIS T+I +C R D A + V + L + +Y L+ K
Sbjct: 578 VGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDN 637
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTA-TYTALIG 436
+ EM + G + G + ++ L RR A +++ +++ Q+ TY ++
Sbjct: 638 AYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILN 697
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D+A KI++++C K + P++ TF +++ L K GR DA
Sbjct: 698 GLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDA 743
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 192/471 (40%), Gaps = 64/471 (13%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + D TY+ +LD + + + + +F M KGI + Y ++H + G
Sbjct: 367 ARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG--- 423
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + TD+ M+ G+ PN Y + +++
Sbjct: 424 --------------------------------AIADLTDLLDLMVANGISPNNYIFNIVL 451
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ +EA+ IFS+M + G+ PD ILI+ CK G +L M + +
Sbjct: 452 CAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVT 511
Query: 239 LRYPVFKE---ALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQ 294
VF L T ++ + L +++ Q P + N + + EG + + Q
Sbjct: 512 PNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCN--EGQVMVAQ 569
Query: 295 GLVLILLK---KKNLVAIDSL-----LSGIMDKSIQLDSAVIS-----------TIIEVN 335
L+ + + + N+++ ++L L+G D++ QL ++S T++
Sbjct: 570 RLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGY 629
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R D A F ++ + Y ++ L F + E+ M K+G +
Sbjct: 630 CKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDI 689
Query: 396 YLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCT-ATYTALIGVYFSAGSADKALKIYKT 453
Y ++++ L A KIF SL +D + T+T +I V F G A+ ++ +
Sbjct: 690 YTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFAS 749
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVS--DAEIYRKEKKSIQADALSKDAV 502
+ G+ P++ T+ +++ + + G + D EK D++ +A+
Sbjct: 750 IPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAI 800
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 183/450 (40%), Gaps = 34/450 (7%)
Query: 47 EKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
E A FN ++R S D TY+ + F RI F L+ + G ++ V
Sbjct: 69 ELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVI 128
Query: 105 TSVMHWLSNAGDVDGAVNIW-EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+++ L +A VD A++I M C P +VS +K L RV+EA ++ M
Sbjct: 129 NQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMA 188
Query: 164 QRG---LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ G PN TY +++ L +A + A + M + GV+ D + +I+ CKA
Sbjct: 189 EDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQ 248
Query: 221 ETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDN 276
+L++M + + + Y + L + D + +L + P+ ++ N
Sbjct: 249 AVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYN 308
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
T I+G L K + + D +L ++DK ++ D + +I
Sbjct: 309 -------TIIDG-----------LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ E L+ + Y L+ L K + +I M + G V
Sbjct: 351 STGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVT 410
Query: 397 LGALLIHRLGSARRPVPA--AKIFSLLPEDQKCTATY--TALIGVYFSAGSADKALKIYK 452
+ +L+H G A R A + L+ + Y ++ Y D+A+ I+
Sbjct: 411 IYGILLH--GYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFS 468
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M + G+ P + T+ +L+ L KLGRV DA
Sbjct: 469 RMSQHGLSPDVVTYGILIDALCKLGRVDDA 498
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 108/215 (50%), Gaps = 6/215 (2%)
Query: 12 LKYSTWDSAQ--DLLKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDR 66
L T ++AQ D++ ++ +K D + + +L+ + ++ A+ F + R +G
Sbjct: 596 LAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLR-KGVTPGA 654
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY+T+L +R S K ++ M + G D TY +++ L VD A I++
Sbjct: 655 VTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQS 714
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ K+ P I+++T + +LF R K+A D++ + GL PN TY ++M+ +++ G
Sbjct: 715 LCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGL 774
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+E +F M+++G PD N +I GE
Sbjct: 775 LDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGE 809
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 140/353 (39%), Gaps = 49/353 (13%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P + +Y+ R++ + +++ G N L+ L A + +EA++I
Sbjct: 88 PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147
Query: 194 F-SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+M E G P+ +CN L++ C E R+ +EAL+
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCN---------------EKRV-------EEALELLH 185
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
E+ +P ++ N T I+G L K + + + +
Sbjct: 186 TMAEDGG------GNCTPNVVTYN-------TIIDG-----------LCKAQAVDRAEGV 221
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
L ++DK ++LD STII+ C + D A ++ + + + Y +I L K
Sbjct: 222 LQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK 281
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKC-TAT 430
+ +++ M G V +I L A+ A + ++ +D K T
Sbjct: 282 AQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQT 341
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y LI Y S G + ++ + M +G+ P + T+++LL L K G+ ++A
Sbjct: 342 YNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E L+ N + G D +TY +L+ + + +F+ + K + + +T+T
Sbjct: 672 EAKELYLNMIKS--GQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L G A++++ + P +V+Y MK + + E +++ M + G
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
P+ ++ L+ G+ A SK+ E + + ++LI
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLI 836
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 179/465 (38%), Gaps = 52/465 (11%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYT 70
+Y D+A+ L+ ++P+ D+YT +++ + + + RG TYT
Sbjct: 156 RYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 215
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L+ ++ V + M+ KG + VTY +++ + G VD A +
Sbjct: 216 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 275
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P VSYT +K L R ++ +++ EM+++ PN T+ +L+ + R G E A
Sbjct: 276 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 335
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+++ +M G + CNI+I CK G L M + + L+
Sbjct: 336 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 395
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
A+ W+ + E + N VT + + IL +K +
Sbjct: 396 LCRAER-----WEDAKELLKEMVRKNCPPNEVTFNT---------FICILCQKGLIEQAT 441
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
L+ + + +++ + ++ C R D AL F YS+ N Y L+ L
Sbjct: 442 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF-YSMPCKPNT--ITYTTLLTGL 498
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
AE++ EM + + V T
Sbjct: 499 CNAERLDAAAELLAEMLQKDCAPNV---------------------------------VT 525
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ L+ + G D+A+++ + M G P+L T+N LL G+ K
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 570
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 179/418 (42%), Gaps = 18/418 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y T++ + ++ + + + M + DA TYT ++ L + G V A+++
Sbjct: 143 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 199
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M + C P++V+YT ++ + + +A +V EM +G PN TY V++ + R
Sbjct: 200 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 259
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ ++A E +++ G QPD + +++ C A + + M E F
Sbjct: 260 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 319
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
++ F + + QV Q S + N + + ++ + K+
Sbjct: 320 DMLVRFFCRGGMVERAI-QVLEQMSGHGCAANTTLCNI-------------VINTICKQG 365
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ L+ + D+ +T+++ C R + A + V+ + +
Sbjct: 366 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 425
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
I IL + + ++E+M++ G + + L++ R A ++F +P
Sbjct: 426 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 485
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T TYT L+ +A D A ++ M +K P++ TFNVL++ + G + +A
Sbjct: 486 PN-TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 542
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 164/433 (37%), Gaps = 89/433 (20%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F N +S S GF D +YTT+L AKR ++ +F M EK + VT+
Sbjct: 262 VDDAREFLNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 320
Query: 106 SVMHWLSNAGDVDGAVNIWEEMK------------------LKE---------------- 131
++ + G V+ A+ + E+M K+
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380
Query: 132 -CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P +SYT +K L +R ++A ++ KEM+++ PPN T+ + L + G E+A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM--KEN------------- 235
+ +M E G + + N L+ C G + + + M K N
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 500
Query: 236 --RLALRYPVFKEALQ--------TFKV----------ADENDSLLWQVHPQ-FSPEFIS 274
RL + E LQ TF V DE L+ Q+ +P I+
Sbjct: 501 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 560
Query: 275 DNDAVEFVTTDI--EGPLSIDQGLVL---------------ILLKKKNLVAIDSLLSGIM 317
N ++ +T D E L + GLV +L ++ + + +
Sbjct: 561 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 620
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
D ++ + + + I+ C DGA+ F Y V Y+ LI L +
Sbjct: 621 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 680
Query: 378 KVAEIVEEMTKAG 390
+ +++ E+ G
Sbjct: 681 ETRDLLRELCSRG 693
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + D TY++++ + R+ +F ++Q+ G+ AV Y ++ L + D
Sbjct: 586 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 645
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
GA++ + M C P ++Y ++ L D +KE D+ +E+ RG+
Sbjct: 646 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 111/260 (42%), Gaps = 24/260 (9%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEK----AWLFFNWVSRSRGFNHDRFTYTTML 73
DSA +L ++P K ++ T +L E+ A L + + N T+ ++
Sbjct: 473 DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV--VTFNVLV 530
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
F + + + E M E G + +TY +++ ++ + + A+ + +
Sbjct: 531 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 590
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P IV+Y++ + +L DRV+EA ++ + G+ P Y ++ L + + A++
Sbjct: 591 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 650
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
F+ M G P++ LIE A E ++KE R LR + L
Sbjct: 651 FAYMVSNGCMPNELTYITLIEG--LANED--------FLKETRDLLRELCSRGVL----- 695
Query: 254 ADENDSLLWQVHPQFSPEFI 273
N +LL + P+FS + +
Sbjct: 696 ---NKNLLEEWRPKFSNQTV 712
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
Q TYT L+ + +A+++ M KG P++ T+NV++ G+ + GRV DA
Sbjct: 208 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 267
Query: 485 Y--RKEKKSIQADALSKDAV 502
+ R Q D +S V
Sbjct: 268 FLNRLSSYGFQPDTVSYTTV 287
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 118/541 (21%), Positives = 209/541 (38%), Gaps = 73/541 (13%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
+ +S + IL TW+ + +L +P K + V +L TH E FF+WVSR+ F
Sbjct: 49 ELVSKISIILSSPTWERSSELSHLIP-KLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFF 107
Query: 63 NHDRFTYTTMLD------IF-----------------GEAKRI----SSMKYVFEL---- 91
HD + +ML+ +F GE KR+ S + ++
Sbjct: 108 KHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTL 167
Query: 92 -------------------------MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
M GI + T+ +++ L N G V A I
Sbjct: 168 YSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGH 227
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ P +YT+ + N + A +++ M++ G PN TY+ L+ L G+
Sbjct: 228 IFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGR 287
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEA+++ +M + G++P A I I C AG + + +L MK+ +
Sbjct: 288 LEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTA 347
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ + + + H + + AV + + + L ++ L + +
Sbjct: 348 LISGLSRDGKFEVAIGVYHKMLADGLVP--TAVTY--SALINQLYVEGRFETALTIFEWM 403
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
++ DSL ++ + II+ C A F+ +K + Y +
Sbjct: 404 LSHDSL----------PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNII 453
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED-- 424
I I K ++E M G L + A LI + A +F+ + E
Sbjct: 454 IHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI 513
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY A+I Y + D AL ++ M G PS GT+N++++G K R+S+AE
Sbjct: 514 SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAEN 573
Query: 485 Y 485
+
Sbjct: 574 F 574
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 172/439 (39%), Gaps = 27/439 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G YT + +A R + M+++G + TYT+++ LS G +
Sbjct: 301 KGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEV 360
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ +M PT V+Y+A + L++ R + A +++ M+ PN TY V+++
Sbjct: 361 AIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIK 420
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G ++A IF +M +AG P+ NI+I K G + +L MK N L L
Sbjct: 421 GFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKL 480
Query: 240 RYPVFKEALQTFKVADEND---SLLWQ-VHPQFSPEFISDN-------------DAVEFV 282
+ + F + + SL + V SP ++ N DA+
Sbjct: 481 DTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALF 540
Query: 283 TTDIEG---PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI-STIIEVNCDH 338
+E P S +++ K N ++ G M K L + + ++ I+ C +
Sbjct: 541 WKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R A F K D Y +LI L + AE E + G V
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ----AEDAERLLDDGCEPNVDTY 656
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
L+ L R A ++ + + Q Y AL+ + ALKI+ +M
Sbjct: 657 TTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVT 716
Query: 457 KGIHPSLGTFNVLLAGLEK 475
G P L + L+ L K
Sbjct: 717 TGFQPCLSDYKALICALCK 735
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D +TY ++ F ++ +F M E GI+ + VTY ++++ V
Sbjct: 474 KGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKV 533
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ ++ +M P+ +Y + +R+ EA + +M+++GL PN TYT
Sbjct: 534 DDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSF 593
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ L + G+ A +IF +M++ P+ + LI+ C+ G+
Sbjct: 594 IDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 31/183 (16%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY M+ F + RIS + M ++G+ + +TYTS + L G A I+ EM
Sbjct: 554 TYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEM 613
Query: 128 KLKE-------------------------------CYPTIVSYTAYMKILFLNDRVKEAT 156
K ++ C P + +YT ++ L R EA
Sbjct: 614 KKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEAD 673
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ + M ++GL P+ Y L+ + + E AL+IF M G QP + LI
Sbjct: 674 QLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICAL 733
Query: 217 CKA 219
CKA
Sbjct: 734 CKA 736
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 64/131 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++ R + E M++KG+ Y +++ +V+ A+ I++ M
Sbjct: 655 TYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSM 714
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P + Y A + L + ++A +++ M+++ + +TVL++ L++ G+
Sbjct: 715 VTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGET 774
Query: 188 EEALEIFSKMQ 198
+ +LE+ M+
Sbjct: 775 DLSLELLHVME 785
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 186/458 (40%), Gaps = 45/458 (9%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V + + ME A LF N + T M+D +A+++ +FE ++
Sbjct: 270 VEEAYRILDEMEHASLFPNLL-----------TVNIMVDRLCKARKLEEAYKIFESASQR 318
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G N D VTY S++ L G VD A ++E+M V YT+ ++ F++ R ++
Sbjct: 319 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 378
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
V+KE+I+RG P+ M+ + +AG+ E+ IF ++ G PD + +ILI
Sbjct: 379 HKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHG 438
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
KAG+ R I MK+ AL + + F + +VH +
Sbjct: 439 LTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSG-------KVHKAY------- 484
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM------DKSIQLDSAVIS 329
+ +E + P G ++ L ID L M K I+L+ + S
Sbjct: 485 -EILEEMKEKCVQPTVATYGAIV-----DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYS 538
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++I+ R D A L E +K L + +L+ L+K + + M +
Sbjct: 539 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEM 598
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK-----CTATYTALIGVYFSAGSA 444
Y ++LI+ L ++ K F + QK TYT +I G+
Sbjct: 599 KCPPNTYTYSILINGLCRVQK---YNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 655
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A +++ G P +FN L+ G+ R +A
Sbjct: 656 TDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 195/448 (43%), Gaps = 53/448 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A FF+ + +++G D +YT+M+ + +A R+ + +F M+ + A Y
Sbjct: 131 VDMACKFFHEL-KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYN 189
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +AG + A + E ++ + C P++VS+ + + L +V EA ++ E++++
Sbjct: 190 TMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKK 248
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN TY ++++ L G+ EEA I +M+ A + P+ NI++++ CKA
Sbjct: 249 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA------ 302
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+L Y +F+ A Q +P D V + +
Sbjct: 303 ---------RKLEEAYKIFESASQR------------GCNP----------DCVTYCSL- 330
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I+G L KK + L ++D + V +++I H R++
Sbjct: 331 IDG-----------LGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 379
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ ++ + T + + K K I E++ G V ++LIH L
Sbjct: 380 KVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 439
Query: 406 GSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A + + IF + + Y A++ + +G KA +I + M K + P++
Sbjct: 440 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 499
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
T+ ++ GL K+ R+ +A + +E KS
Sbjct: 500 ATYGAIVDGLAKIDRLDEAYMLFEEAKS 527
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 180/455 (39%), Gaps = 27/455 (5%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V R F YT ++ EA+R + MQE G + +T+++ L+ G
Sbjct: 35 VMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREG 94
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
V A+ + +E+K P IV Y + V A + E+ +GL P+ +YT
Sbjct: 95 QVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYT 154
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++ L +AG+ EA E+F++M+ P A N +I AG +L ++E
Sbjct: 155 SMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 214
Query: 236 RLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
F L + DE SL E + D E S
Sbjct: 215 GCIPSVVSFNSILTCLGKKRKVDEALSLF------------------EVMKKDAEPNSST 256
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
++ +L + +L + S+ + ++ +++ C R+ + A FE +
Sbjct: 257 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ N + Y +LI L K + + E+M AGH+ + LI R
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 376
Query: 413 PAAKIFSLLPEDQKCTATYTAL---IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
K+F L + C T L + F AG +K I++ + G P + ++++L
Sbjct: 377 DGHKVFKELIR-RGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435
Query: 470 LAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
+ GL K G+ + + +++ DA + +AV
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAV 470
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 173/435 (39%), Gaps = 29/435 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ Y TM+ +G A R + E ++E+G V++ S++ L VD A++++E
Sbjct: 186 YAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV 245
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK K+ P +Y + +L L RV+EA + EM L PN T ++++ L +A K
Sbjct: 246 MK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 304
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEA +IF + G PD LI+ K G+ + M + V+
Sbjct: 305 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
++ F + + H F E + + L++ + + K +
Sbjct: 365 LIRNFFIHGRKED----GHKVFK----------ELIRRGCKPDLTLLNTYMDCVFKAGEV 410
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIE--VNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ I D S +I R + F + L+ AY
Sbjct: 411 EKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNI--FHAMKQQGFALDARAYN 468
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
A++ K K EI+EEM + V ++ L R A +F E+
Sbjct: 469 AVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLF----EE 524
Query: 425 QKCTAT------YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
K Y++LI + G D+A I + M +KG+ P++ T+N LL L K
Sbjct: 525 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 584
Query: 479 VSDAEIYRKEKKSIQ 493
+++A + + K ++
Sbjct: 585 INEALVCFQSMKEMK 599
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
RR D A+LA ++ +AY LIG L + + E++ +M + G+ +GV+L
Sbjct: 24 RRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLF 83
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPE-DQKC----TATYTALIGVYFSAGSADKALKIYKT 453
L+ L R A +L+ E C Y I + AG+ D A K +
Sbjct: 84 TTLVRALA---REGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHE 140
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ +G+ P ++ ++ L K GR+ +AE
Sbjct: 141 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAE 170
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/530 (22%), Positives = 218/530 (41%), Gaps = 72/530 (13%)
Query: 29 IKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNH-DRFTYTTMLDIFGEAKRIS 83
+ WD TV+ L +T E A L + R RG + D + ++D + + + ++
Sbjct: 146 VSWDGVTVSTALVGLCRTGLVGEAAALA-EMLVRGRGIDGLDVVGWNALIDGYCKVQDMA 204
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ V E M +G+ +D V Y S++ ++GD D A+ + E MK P +V+YTA +
Sbjct: 205 AALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALI 264
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+ EA +Y+ M++ G+ P+ T + L++ L R G++ EA +F +M + GV
Sbjct: 265 GEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVA 324
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDS 259
P+ LI+ KA + +L M + + ++ + K+ + D
Sbjct: 325 PNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDV 384
Query: 260 LLWQVHPQFSPEFIS------------DNDAVEFVTTDIEGP---------LSIDQGLVL 298
L +P F++ + D E V +E SI GLV
Sbjct: 385 LRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVK 444
Query: 299 ---------ILLKKK------NLVAIDSLLSG----------------IMDKSIQLDSAV 327
+ K K N+V +L+ G ++ + ++ ++ V
Sbjct: 445 RGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFV 504
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +++ + +GA F+ + L L+ Y L+ L K P ++ +E+
Sbjct: 505 VDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELM 564
Query: 388 KAGHS-----LGVYLGALL-IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSA 441
+ S V++ L + + A+ + + L P+ ATY +I
Sbjct: 565 EKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ----ATYNTMIAARCRE 620
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
G KALK+ K M R I P+L T+ L+ GL + G V A+ E S
Sbjct: 621 GKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMAS 670
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 182/442 (41%), Gaps = 32/442 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + F ++++ + I + +F+ M E+G+ +D V YT++M L G++ A
Sbjct: 497 GVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAA 556
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+ K P V Y ++ L + EA KEM GL P+ TY ++
Sbjct: 557 FKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAA 616
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
R GK +AL++ +M+ ++P+ L+ +AG + +L M A
Sbjct: 617 RCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPT 676
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ LQ + D +L ++H + + +++ LV +L
Sbjct: 677 SLTHQRVLQACSGSRRPDVIL-EIHEL-------------MMGAGLHADITVYNTLVHVL 722
Query: 301 ----LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ + V +D +L+ + I D+ + +I +C D A + + L
Sbjct: 723 CCHGMARNATVVLDEMLT----RGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGL 778
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ + L+G L + ++ +M K G +L+ V A +
Sbjct: 779 SPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALR 838
Query: 417 IF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
++ +P+ +TY +L+ + AG ++A +++ M R+G+ + T+++LL
Sbjct: 839 LYCEMVSKGFIPK----ASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILL 894
Query: 471 AGLEKLGRVSDAEIYRKEKKSI 492
G KL + I K+ K +
Sbjct: 895 NGWSKLRNGIEVRILLKDMKEL 916
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA N ++ S GF T+ +L ++R + + ELM G++ D Y
Sbjct: 658 VKKAKFLLNEMA-SAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYN 716
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H L G A + +EM + P +++ A + + + A +Y +M+ +
Sbjct: 717 TLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ 776
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
GL PN T+ L+ L AG+ EA + S M++ G++P+ +IL+
Sbjct: 777 GLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILV 824
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ + D Y ++ + S K + M+ G+ D TY +++ G
Sbjct: 566 KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSK 625
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + +EMK P +++YT + L VK+A + EM G P T+ +++
Sbjct: 626 ALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ + + LEI M AG+ D N L+ C G R ++L M
Sbjct: 686 ACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEM 738
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 140/359 (38%), Gaps = 20/359 (5%)
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
VSY ++ L + A V EM +RG+ + T + + L R G EA +
Sbjct: 116 VSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEM 175
Query: 197 MQEA-GVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+ G+ D N LI+ CK + + ++ M +AL + + F +
Sbjct: 176 LVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHS 235
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTD-IEGPLSIDQGLVLILLKKKNLVAIDSLL 313
+ D+ L + VE + D +E + L+ K K + SL
Sbjct: 236 GDADAAL---------------EVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLY 280
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
G++ + D +S +++ C + A F K+ + Y LI L K
Sbjct: 281 EGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKA 340
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATY 431
+ ++ EM G + + + L+ RLG + A + D TY
Sbjct: 341 RRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTY 400
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
T L+ + AG+ D A ++ M K + P++ TF+ ++ GL K G + A Y ++ K
Sbjct: 401 TVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMK 459
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 81/207 (39%), Gaps = 38/207 (18%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G D+ TY TM+ + S + + M+ I + +TYT+++ L AG V
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVV 658
Query: 118 DGAVNIWEEMKLKECYPT-----------------------------------IVSYTAY 142
A + EM PT I Y
Sbjct: 659 KKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTL 718
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ +L + + AT V EM+ RG+ P+ T+ L+ ++ + A I+++M G+
Sbjct: 719 VHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGL 778
Query: 203 QPDKAACNIL---IEKCCKAGETRTII 226
P+ A N L +E + GE T++
Sbjct: 779 SPNIATFNTLLGGLESAGRIGEADTVL 805
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 91/227 (40%), Gaps = 44/227 (19%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ VL H A + + + +RG D T+ ++ ++ + + ++ M
Sbjct: 717 TLVHVLCCHGMARNATVVLDEM-LTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLH 775
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY----TAYMKILFLND 150
+G++ + T+ +++ L +AG + A + +MK P ++Y T Y K ++
Sbjct: 776 QGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKK---SN 832
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV-------- 202
+V EA +Y EM+ +G P TY LM +AG +A E+FS+M+ GV
Sbjct: 833 KV-EALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD 891
Query: 203 ---------------------------QPDKAACNILIEKCCKAGET 222
+P K + + + G T
Sbjct: 892 ILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMT 938
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
L+ + ALI K+ +VE MT G +L V L+ + A +
Sbjct: 184 GLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALE 243
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ + D + TYTALIG Y D+A +Y+ M R G+ P + T + L+ GL
Sbjct: 244 VVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLC 303
Query: 475 KLGRVSDAEIYRKEKKSI 492
+ G+ S+A +E I
Sbjct: 304 RDGQFSEAYALFREMDKI 321
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 196/490 (40%), Gaps = 72/490 (14%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINI 99
+ H P E A FF + R+ G + +L+ F EAKR ++ + E G
Sbjct: 136 RAHRP-ELALAFFGQLLRT-GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVP 193
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATD 157
D +Y+ ++ L + G A ++ M C P +V+Y + F V +A D
Sbjct: 194 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 253
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRA--------------------------------- 184
++KEM+QRG+PP+ TY ++ L +A
Sbjct: 254 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 313
Query: 185 --GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLAL 239
G+++EA+ +F +M+ + PD ++L+ CK G E R + + +N
Sbjct: 314 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 373
Query: 240 RYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQGLV 297
Y + T + D D + +P+F + N ++ + + +D+ ++
Sbjct: 374 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM-----LDKAMI 428
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ + + D ++ D T+I C + D A+ F + +
Sbjct: 429 --------------IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 474
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
++ AY LI + K E++ E+ G L + + +I+ L R + A I
Sbjct: 475 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 534
Query: 418 FSL-----LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
F L L D Y+ L+ Y G +KAL+++ M GI P++ + L+ G
Sbjct: 535 FDLTVNVGLHPD---AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 591
Query: 473 LEKLGRVSDA 482
K+GR+ +
Sbjct: 592 YCKIGRIDEG 601
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 170/429 (39%), Gaps = 55/429 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY +++ +A+ + + M K + + TY ++++ S+ G
Sbjct: 261 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 320
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +++EM+ P +V+ + M L ++KEA DV+ M +G P+ ++Y +++
Sbjct: 321 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 380
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G + ++F M G+ PD N+LI+ G ++I M+++ +
Sbjct: 381 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 440
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
++ + K+ D + + +P+ + N ++ T
Sbjct: 441 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS-------- 492
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
LLK K L+ S IM+ + LD S+II C R A F+ +V +
Sbjct: 493 ----LLKAKELI------SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L+ + Y L+ + K + + M AG V
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV-------------------- 582
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
Y L+ Y G D+ L +++ M ++GI PS +++++ GL +
Sbjct: 583 -------------VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQ 629
Query: 476 LGRVSDAEI 484
GR A++
Sbjct: 630 AGRTVPAKM 638
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG Y+ ++D +A R K F M E GI +D TY V+ L D
Sbjct: 611 RGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDE 670
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++E++ I++ + +F RV+EA D++ + + L PN TY++++
Sbjct: 671 AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMIT 730
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ G EEA ++FS MQ AG +P+ N ++ + K E
Sbjct: 731 NLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 772
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 4/214 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+ I D YT N ++K + ++KA + FN + R G D TY T++
Sbjct: 396 DLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPDVVTYRTVIAALCR 454
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
++ F M ++G+ D Y ++ G + A + E+ + IV
Sbjct: 455 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 514
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+++ + L RV +A +++ + GL P+ Y++LM+ GK E+AL +F M
Sbjct: 515 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 574
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
AG++P+ L+ CK G + + R M
Sbjct: 575 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 608
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
P K+ + Q TH + KA + + + G + D ++++++ + R+ +
Sbjct: 475 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNN-GMHLDIVFFSSIINNLCKLGRVMDAQN 533
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY----TAYM 143
+F+L G++ DAV Y+ +M G ++ A+ +++ M P +V Y Y
Sbjct: 534 IFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC 593
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
KI R+ E +++EM+QRG+ P+ Y+++++ L +AG+ A F +M E+G+
Sbjct: 594 KI----GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649
Query: 204 PDKAACNILIE 214
D NI++
Sbjct: 650 MDICTYNIVLR 660
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 141/345 (40%), Gaps = 28/345 (8%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P +TY +LM+ RA + E AL F ++ G++ + N L+E C+A T
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDS--------LLWQVHPQFSPEFISDN 276
+ IL + + L VF ++ + D+ S ++ + SP ++ N
Sbjct: 178 ALDILLH-RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 236
Query: 277 DAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ E V I L +V L K + + ++ L +++K
Sbjct: 237 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 296
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ ++ + +I + A+ F+ + + + L+G L K +
Sbjct: 297 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 356
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT--ALIGV 437
++ + M G + V+ ++++ + V +F L+ D YT LI
Sbjct: 357 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 416
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y + G DKA+ I+ M G+ P + T+ ++A L ++G++ DA
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 26 NLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+L I + S +N + K M+ +F ++ + G + D Y+ ++D + ++
Sbjct: 509 HLDIVFFSSIINNLCKLGRVMDAQNIF--DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 566
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
VF+ M GI + V Y ++++ G +D ++++ EM + P+ + Y+ +
Sbjct: 567 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 626
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
LF R A + EM + G+ + TY +++ L + ++EA+ +F +++ V+ +
Sbjct: 627 LFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 686
Query: 206 KAACNILIE 214
N +I+
Sbjct: 687 IITLNTMID 695
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 4/219 (1%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRG 61
I+N+ K+ + + DL N+ + D+ + ++ + MEKA F+ + S G
Sbjct: 519 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAG 577
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ Y T+++ + + RI +F M ++GI + Y+ ++ L AG A
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EM I +Y ++ LF N EA ++KE+ + N T +++ +
Sbjct: 638 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 697
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ + EEA ++F+ + + + P+ +I+I K G
Sbjct: 698 FQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEG 736
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
Y +I +F G +KA ++K M ++GI P L T+N ++ L K + AE + ++
Sbjct: 234 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ- 292
Query: 490 KSIQADALSKDAVPMEEKICDLLYG 514
++K +P +L+YG
Sbjct: 293 ------MVNKRVLPNNWTYNNLIYG 311
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 120/232 (51%), Gaps = 4/232 (1%)
Query: 32 DSYTVNQVLKTHPPMEKAW---LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D +T N ++ H KA L F + +GF D TY ++L F + + ++ V
Sbjct: 167 DLWTYNAMVSVHGRCGKAQEAELMFKELV-EKGFQPDAVTYNSLLYAFAKEGDVERVERV 225
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
E + + G D +TY +++H G +D A+ +++EM+ C P V+YT + L
Sbjct: 226 CEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGK 285
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
DR+ EA V +EM GL P T++ L+ ++G+ ++A F +M E+GV+PD+ A
Sbjct: 286 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLA 345
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
++++ ++ ETR ++++ R M ++ +++ L +E+D +
Sbjct: 346 YLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 397
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D TY TM+ ++G+ R+ +++ M+ G DAVTYT ++ L + A
Sbjct: 233 GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 292
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EEM PT+V+++A + + R +A + M++ G+ P+ Y V+++
Sbjct: 293 GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 352
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
R+ + + + ++ M + G +PD +L+ K E I +++ M+
Sbjct: 353 FARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 405
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/426 (19%), Positives = 163/426 (38%), Gaps = 59/426 (13%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNA 114
R + D ++ T+++ ++ +++ EL+ E G+ DA+TY +++ S
Sbjct: 88 RDQDIEPDLVSFNTLINARAKSGCLAA-GVALELLHEVRQAGLRPDAITYNTLISACSQG 146
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
++D AV ++EEM EC P + +Y A + + + +EA ++KE++++G P+ TY
Sbjct: 147 SNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTY 206
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ + G E + ++ +AG + D N +I Y K
Sbjct: 207 NSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHM---------------YGKM 251
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
RL L ++ E +P DAV +
Sbjct: 252 GRLDLALGLYDEMRAI----------------GCTP------DAVTYTV----------- 278
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
LV L K + +L + D ++ S +I R+D A F+ V+
Sbjct: 279 -LVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVES 337
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ +R AYL ++ + + + K+ + M K G+ L +L+ L
Sbjct: 338 GVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 397
Query: 415 AKIFSLLPEDQKCTATYTALI--GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ +D + L+ + A + + K C +G P + +L
Sbjct: 398 EGVI----QDMEAVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDA 453
Query: 473 LEKLGR 478
EK+G+
Sbjct: 454 YEKMGK 459
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 142/360 (39%), Gaps = 27/360 (7%)
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
W ++ PT+ + A M + + R +A + M + + P+ ++ L+ +
Sbjct: 50 WPHLRFPHL-PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAK 108
Query: 184 AGKYEE--ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM--KENRLAL 239
+G ALE+ ++++AG++PD N LI C + + + M E R L
Sbjct: 109 SGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDL 168
Query: 240 -RYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
Y A E + + + V F P+ ++ N L+
Sbjct: 169 WTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYN------------------SLL 210
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K+ ++ ++ + ++ + D +T+I + R D AL ++ +
Sbjct: 211 YAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCT 270
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ Y L+ L K++ + +++EEM AG + + LI + R A +
Sbjct: 271 PDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERT 330
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + E + Y ++ V+ + K + +Y+ M + G P G + VLLA L K
Sbjct: 331 FDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAK 390
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R+ + V + +Q+ I I T ++ + AGDV + I+ MK P + Y
Sbjct: 672 RLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYR 731
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ +L N R ++ + EM G P+ L+ G ++ +E++ + EA
Sbjct: 732 IMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEA 791
Query: 201 GVQPDKAACNILI 213
G++PD+ N LI
Sbjct: 792 GLEPDEDTYNTLI 804
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 159/393 (40%), Gaps = 43/393 (10%)
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL--NDRV 152
+G D + S++ G + +++ E +++ P + + I+ L N ++
Sbjct: 438 QGYEPDGKSLLSILDAYEKMGKHEKGLSLLE--WIRQHVPNSHNLISECSIMLLCKNGKI 495
Query: 153 KEATDVY--KEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+A Y K+M++RG +C Y L+ YL A + EA ++F MQ G+ P +
Sbjct: 496 VDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIY 555
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
+I CC+ G T ++ + ++L + A+ + LWQ F
Sbjct: 556 QSIIYTCCRLGFPETAYQLMDDAARSDISLNILSCRVAM----IEAYGKLKLWQQAENFV 611
Query: 270 PEFISDNDAVEFVTTDI------EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
++ + + G + + I++KK L ++S ++G+M +++ +
Sbjct: 612 KGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVES-VNGMM-RALIV 669
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D R D + + +D+ + ++ L ++ K +V +I
Sbjct: 670 DG--------------RLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIY 715
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARR------PVPAAKIFSLLPEDQKCTATYTALIGV 437
M AG+ ++L ++I L +R V + P+ L+ +
Sbjct: 716 NGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPD----LVVLNTLLLM 771
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
Y G+ D+ +++Y ++ G+ P T+N L+
Sbjct: 772 YTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLI 804
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 2/202 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG +Y +L G+AK +FE M+ KG ++ Y +M NA +
Sbjct: 826 RGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSK 885
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ MK PTI + M + EA V + L + Y+ +++
Sbjct: 886 AEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 945
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+R Y + +M+ GV+PD I +T IL+L+ +++ L
Sbjct: 946 AYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDL 1005
Query: 240 RYPVFKEALQTFKVADENDSLL 261
+ E +T + E DS L
Sbjct: 1006 PIRLLTE--RTSSLFTEVDSFL 1025
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 116/318 (36%), Gaps = 51/318 (16%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P + +M R+G++++A ++ M++ ++PD + N LI K+G
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSG-------- 110
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
L V E L + A P+ I+ N +
Sbjct: 111 ---------CLAAGVALELLHEVRQAG------------LRPDAITYNTLIS-------- 141
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+ QG NL ++ ++ + D + ++ V+ + A L F
Sbjct: 142 --ACSQG--------SNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMF 191
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ V+ + Y +L+ K +V + EE+ KAG +IH G
Sbjct: 192 KELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKM 251
Query: 409 RRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
R A ++ + CT TYT L+ +A K+ + M G+ P+L T
Sbjct: 252 GRLDLALGLYDEM-RAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVT 310
Query: 466 FNVLLAGLEKLGRVSDAE 483
F+ L+ K GR DAE
Sbjct: 311 FSALICAYAKSGRQDDAE 328
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 80/178 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G+ + Y M+ + KR ++ + M+ G D V +++ + G+
Sbjct: 719 KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNF 778
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D + ++ + P +Y + + N R +E + EM +RGL P +Y +L
Sbjct: 779 DRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKIL 838
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ +A +E+A +F +M+ G + +++ +++++ A +L MKE+
Sbjct: 839 LAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKED 896
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+A L F + R++G+ +R Y M+ I+ A+ S +++ M+E GI T
Sbjct: 849 EQADLLFEEM-RTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHI 907
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M +G D A + +K + + Y+ + N EM + G
Sbjct: 908 LMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDG 967
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ P+ +T + + ++A+ + +Q+ G
Sbjct: 968 VEPDHQVWTSFIRAASLCEQTDDAILLLKSLQDCG 1002
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 88/155 (56%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG N + TY TML F A +I F M+++ ID VTYT+V+H AG++
Sbjct: 222 RGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKR 281
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
N+++EM + P++ +Y A++++L D V+ A +++EM+++G PN TY VL+
Sbjct: 282 TRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIR 341
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
L AGK+ E+ +M+ G +P+ N++I
Sbjct: 342 GLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIR 376
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +AW FF + R D TYTT++ FG A I + VF+ M +G+ TY
Sbjct: 244 IRQAWEFF-LEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYN 302
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ + L V+ AV ++EEM K P + +Y ++ LF + ++ + M
Sbjct: 303 AFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENE 362
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G PN TY +++ Y + E+AL +F KM P+ NILI
Sbjct: 363 GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILI 410
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 176/478 (36%), Gaps = 95/478 (19%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWV-SRSRGFNHDR 66
IL + Q +L W VN VLK H P KA FF+++ + R + HD
Sbjct: 32 ILSFHQTLDDQFILSTKTTPWTPNLVNSVLKRLWNHGP--KALQFFHFLDNHHREYVHDA 89
Query: 67 FTYTTMLDIFGEAKRISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
++ +DI A R+ V+ L M+ I T+ V +++G D AV +
Sbjct: 90 SSFDLAIDI---AARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKL 146
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ M C+ + S+ + +L + RV++A ++++ + R + TY V++
Sbjct: 147 FLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSADTVTYNVIVNGWCL 205
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
+ +ALE+ +M + G+ P+ N +++ +AG+ R MK+ +
Sbjct: 206 IKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVT 265
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + F VA E +K+
Sbjct: 266 YTTVVHGFGVAGE--------------------------------------------IKR 281
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
V + + G++ A + I+V C + A++ FE V+ T Y
Sbjct: 282 TRNVFDEMIREGVLP-----SVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTY 336
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI L F + E+++ M G P
Sbjct: 337 NVLIRGLFHAGKFSRGEELMQRMENEGCE-----------------------------PN 367
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
Q TY +I Y +KAL +++ M P+L T+N+L++G+ R D
Sbjct: 368 FQ----TYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILISGMFVRKRSED 421
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 10/166 (6%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D+ + I+ C +R AL + V +N T Y ++ + + E
Sbjct: 192 DTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFF 251
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGV 437
EM K + V ++H G A +F +LP ATY A I V
Sbjct: 252 LEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPS----VATYNAFIQV 307
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
S + A+ +++ M RKG P++ T+NVL+ GL G+ S E
Sbjct: 308 LCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGE 353
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 314 SGIMDKSIQL-----------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
SG DK+++L D A +TI++V C +R + A F +++ + +
Sbjct: 137 SGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-ALRGRFSADTVT 195
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAG--HSLGVYLGALL-IHRLGSARRPVPAAKIFS 419
Y ++ + PK E+++EM G +L Y L R G R+ A F
Sbjct: 196 YNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQ----AWEFF 251
Query: 420 LLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
L + + C TYT ++ + AG + ++ M R+G+ PS+ T+N + L K
Sbjct: 252 LEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKK 311
Query: 477 GRVSDAEIYRKE 488
V +A + +E
Sbjct: 312 DSVENAVVMFEE 323
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LIHR+ S R P+ K F+++ E Y S+G DKA+K++ M G
Sbjct: 111 LIHRMRSLRIG-PSPKTFAIVAER-------------YASSGKPDKAVKLFLNMHEHGCF 156
Query: 461 PSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
L +FN +L L K RV A E++R + AD ++ + +
Sbjct: 157 QDLASFNTILDVLCKSKRVEKAYELFRALRGRFSADTVTYNVI 199
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYR 486
T TY ++ + KAL++ K M +GI+P+L T+N +L G + G++ A E +
Sbjct: 193 TVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFL 252
Query: 487 KEKK 490
+ KK
Sbjct: 253 EMKK 256
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 196/490 (40%), Gaps = 72/490 (14%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINI 99
+ H P E A FF + R+ G + +L+ F EAKR ++ + E G
Sbjct: 123 RAHRP-ELALAFFGQLLRT-GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVP 180
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATD 157
D +Y+ ++ L + G A ++ M C P +V+Y + F V +A D
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 240
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRA--------------------------------- 184
++KEM+QRG+PP+ TY ++ L +A
Sbjct: 241 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 300
Query: 185 --GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLAL 239
G+++EA+ +F +M+ + PD ++L+ CK G E R + + +N
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360
Query: 240 RYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQGLV 297
Y + T + D D + +P+F + N ++ + + +D+ ++
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM-----LDKAMI 415
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ + + D ++ D T+I C + D A+ F + +
Sbjct: 416 --------------IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 461
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
++ AY LI + K E++ E+ G L + + +I+ L R + A I
Sbjct: 462 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521
Query: 418 FSL-----LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
F L L D Y+ L+ Y G +KAL+++ M GI P++ + L+ G
Sbjct: 522 FDLTVNVGLHPD---AVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNG 578
Query: 473 LEKLGRVSDA 482
K+GR+ +
Sbjct: 579 YCKIGRIDEG 588
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 170/429 (39%), Gaps = 55/429 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY +++ +A+ + + M K + + TY ++++ S+ G
Sbjct: 248 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 307
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +++EM+ P +V+ + M L ++KEA DV+ M +G P+ ++Y +++
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G + ++F M G+ PD N+LI+ G ++I M+++ +
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
++ + K+ D + + +P+ + N ++ T
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS-------- 479
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
LLK K L+ S IM+ + LD S+II C R A F+ +V +
Sbjct: 480 ----LLKAKELI------SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L+ + Y L+ + K + + M AG V
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV-------------------- 569
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
Y L+ Y G D+ L +++ M ++GI PS +++++ GL +
Sbjct: 570 -------------VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQ 616
Query: 476 LGRVSDAEI 484
GR A++
Sbjct: 617 AGRTVPAKV 625
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 107/515 (20%), Positives = 203/515 (39%), Gaps = 58/515 (11%)
Query: 12 LKYSTWDSAQDLLKNL---PIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHD 65
K + A DL K + I D T N V L M+KA F + R ++
Sbjct: 230 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 289
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
+TY ++ + + VF+ M+ I D VT + +M L G + A ++++
Sbjct: 290 -WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
M +K P + SY + + + TD++ M+ G+ P+ YT+ VL++ G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
++A+ IF++M++ GV+PD +I C+ G+ + M + +A +
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+Q F + SLL + E IS E + + + ++ L K
Sbjct: 469 CLIQGFCT---HGSLLK------AKELIS-----EIMNNGMHLDIVFFSSIINNLCKLGR 514
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
++ ++ ++ + D+ V S +++ C + + AL F+ V + Y
Sbjct: 515 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 574
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
L+ K+ + + EM + G L +++I L A R VPA F + E
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESG 634
Query: 425 -----------------QKC-------------------TATYTALIGVYFSAGSADKAL 448
+C T +I F ++A
Sbjct: 635 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 694
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++ ++ R + PS+ T+++++ L K G V +AE
Sbjct: 695 DLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 729
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG Y+ ++D +A R K F M E GI +D TY V+ L D
Sbjct: 598 RGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDE 657
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++E++ I++ + +F RV+EA D++ + + L P+ TY++++
Sbjct: 658 AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMIT 717
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ G EEA ++FS MQ AG +P+ N ++ + K E
Sbjct: 718 NLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 759
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 141/345 (40%), Gaps = 28/345 (8%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P +TY +LM+ RA + E AL F ++ G++ + N L+E C+A T
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDS--------LLWQVHPQFSPEFISDN 276
+ IL + + L VF ++ + D+ S ++ + SP ++ N
Sbjct: 165 ALDILLH-RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 223
Query: 277 DAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ E V I L +V L K + + ++ L +++K
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 283
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ ++ + +I + A+ F+ + + + L+G L K +
Sbjct: 284 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT--ALIGV 437
++ + M G + V+ ++++ + V +F L+ D YT LI
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 403
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y + G DKA+ I+ M G+ P + T+ ++A L ++G++ DA
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 4/219 (1%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRG 61
I+N+ K+ + + DL N+ + D+ + ++ + MEKA F+ + S G
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV-SAG 564
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ Y T+++ + + RI +F M ++GI + Y+ ++ L AG A
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EM I +Y ++ LF N EA ++KE+ + N T +++ +
Sbjct: 625 VKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 684
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ + EEA ++F+ + + + P +I+I K G
Sbjct: 685 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEG 723
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
Y +I +F G +KA ++K M ++GI P L T+N ++ L K + AE + ++
Sbjct: 221 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ- 279
Query: 490 KSIQADALSKDAVPMEEKICDLLYG 514
++K +P +L+YG
Sbjct: 280 ------MVNKRVLPNNWTYNNLIYG 298
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 223/515 (43%), Gaps = 50/515 (9%)
Query: 8 VYKILK--------YSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS 59
VY++LK +S ++S ++ + + V ++L+ H +E + FN + +
Sbjct: 92 VYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQ 151
Query: 60 ---RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
R N TY T+ + + E M++ G ++ +Y ++H L +G
Sbjct: 152 IIKRSIN----TYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGF 207
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
A+ ++ M + P++ +Y+A M L ++ + +EM GL PN YT+T+
Sbjct: 208 CREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTI 267
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
+ L RAGK +EA I +M +AG PD +LI+ C AG+ + MK +
Sbjct: 268 CIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASS 327
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN---DAVEF-VTTDIEGPLS- 291
+ L F + D++ +F E +D D V F + D +
Sbjct: 328 HKPDRVTYITLLDKFSDHGDLDAI-----KEFWSEMEADGYLPDVVTFTILIDALCKVGK 382
Query: 292 IDQGL-VLILLKKK----NLVAIDSLLSGI-----MDKSIQLDSAVISTIIEVNC----- 336
+D+ L ++KK+ NL ++L+ G+ +D++++L +++ S +E
Sbjct: 383 VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYIL 442
Query: 337 --DHRRRDG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
D+ + G A+ FE + A A + L + + E + K G
Sbjct: 443 FIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG 502
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKA 447
+ +L+ G A R A K+ S + E+ C +LI + A D+A
Sbjct: 503 LAPDAITYNILMRCYGKAGRVDDAIKLLSEM-EENGCDPEVVIINSLIDTLYKADRVDEA 561
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
K+++ M + P++ T+N LLAGL K GRV +A
Sbjct: 562 WKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEA 596
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 198/470 (42%), Gaps = 66/470 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A FFN + + G D TY ++ +G+A R+ + M+E G + + V
Sbjct: 488 LEEAKEFFNGLKKC-GLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIIN 546
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L A VD A +++ MK + PT+V+Y + L RV+EAT ++K MI
Sbjct: 547 SLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIAD 606
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PPN ++ L++ L + G+ + AL++ +M E PD N +I K
Sbjct: 607 DCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYA 666
Query: 226 ILILRYM-------------------KENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
+ M K+ R+ + V KE + V D D W+
Sbjct: 667 FWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVH--HVGDHADGSFWE--- 721
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
D+ G + I+ + +L ++LV +I D +
Sbjct: 722 ------------------DLMGGILIEAEIGQSILFAESLVC----------NTICEDDS 753
Query: 327 VISTIIEVNCDHRRRDGA---LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
V+ +++ C H + A L S + +LE AY +LI L+K +
Sbjct: 754 VLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLE--AYNSLIDGLLKARLTEMAWGLF 811
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKC---TATYTALIGVY 438
+M AG + V+ L + LG + + ++F L E + C T T+ +I
Sbjct: 812 YKMKNAGCTPDVFTYNLFLDALGKSGK---IKELFDLYEEMLFRGCKPNTITHNIVIFGL 868
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ S DKA+ +Y + P+ T+ L+ GL KLGR+ +A+ + +E
Sbjct: 869 VKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEE 918
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E AW F + ++ G D FTY LD G++ +I + ++E M +G + +T+
Sbjct: 805 EMAWGLF-YKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNI 863
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
V+ L + +D A++++ ++ + PT +Y + L R++EA ++EM+ G
Sbjct: 864 VIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYG 923
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
PNC Y +LM + G E A E+F +M + G++PD + +I+++ C G+
Sbjct: 924 CMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDD-- 981
Query: 227 LILRYMKENRLA 238
L Y +E +L+
Sbjct: 982 -ALHYFEELKLS 992
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 7/212 (3%)
Query: 8 VYKILKYSTWDSAQDLLKNL------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
++ ++K ++ D A DL +L P W + L +E+A FF + G
Sbjct: 865 IFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEM-LDYG 923
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ Y +++ FG+ + + +F M ++GI D +Y+ ++ L G VD A+
Sbjct: 924 CMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDAL 983
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ +EE+KL P +V Y + L + RV+EA ++ EM RG+ P+ YTY L+ L
Sbjct: 984 HYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNL 1043
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
AG EEA +++ ++Q G++P+ N LI
Sbjct: 1044 GIAGMVEEAGKMYEELQLKGLEPNVFTYNALI 1075
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 109/475 (22%), Positives = 180/475 (37%), Gaps = 60/475 (12%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S V +VLK+ +A+ FFN V+ H T +L++ +R+ M VF LM
Sbjct: 89 SEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLM 148
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
Q++ I TY ++ L G + A E+M+ SY + +L +
Sbjct: 149 QKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFC 208
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA VY+ M+ G+ P+ TY+ LM L + E + + +M+ G++P+ I
Sbjct: 209 REALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTIC 268
Query: 213 IEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL-QTFKVADENDSLLWQVHPQF 268
I +AG+ IL+ M + + Y V +AL K+ + + L
Sbjct: 269 IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH 328
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
P D V ++T L+ +L AI S + D
Sbjct: 329 KP------DRVTYIT------------LLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTF 370
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ +I+ C + D A + K + Y LI L++LN + E+ M
Sbjct: 371 TILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMES 430
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKAL 448
G Y TY I Y +G + KA+
Sbjct: 431 LGLETTAY---------------------------------TYILFIDYYGKSGESGKAI 457
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
K ++ M GI P++ N L L + GR+ +A E + KK L+ DA+
Sbjct: 458 KTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKC----GLAPDAI 508
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 4/216 (1%)
Query: 20 AQDLLKNLPIKWDSYTVNQV--LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
A+ L+ N + DS + V L H A+ F +++S Y +++D
Sbjct: 740 AESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLL 799
Query: 78 EAKRISSMKY-VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
+A R++ M + +F M+ G D TY + L +G + +++EEM + C P
Sbjct: 800 KA-RLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNT 858
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+++ + L ++ + +A D+Y +++ P +TY L++ L++ G+ EEA + F +
Sbjct: 859 ITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEE 918
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
M + G P+ NIL+ K G+ T + R M
Sbjct: 919 MLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 77/148 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +Y+ M+D ++ + FE ++ G++ D V Y +++ L + V+ A
Sbjct: 958 GIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEA 1017
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++++EM+ + P + +Y A + L + V+EA +Y+E+ +GL PN +TY L+
Sbjct: 1018 LSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRG 1077
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+G + A ++ KM G +P+
Sbjct: 1078 HSMSGNPDRAYAVYKKMMVGGCRPNTGT 1105
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D Y M++ G ++R+ +F+ M+ +GI D TY +++ L AG V+ A
Sbjct: 993 GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
++EE++LK P + +Y A ++ ++ A VYK+M+ G PN T+ L
Sbjct: 1053 GKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 151/369 (40%), Gaps = 29/369 (7%)
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECY-PTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ +L G A N++ ++ C P++ +Y + + L + A ++ +M
Sbjct: 758 LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ +TY + ++ L ++GK +E +++ +M G +P+ NI+I
Sbjct: 818 GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVI------------ 865
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP--EFISDNDAVEFVT 283
+K N L ++ + + + + W P + +A +F
Sbjct: 866 ---FGLVKSNSLDKAIDLYYDLM-----SGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFE 917
Query: 284 TDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
++ + L IL+ K+ ++ L ++ + I+ D S +++ C
Sbjct: 918 EMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVG 977
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ D AL FE L+ + Y +I L + + + +EM G + +Y
Sbjct: 978 KVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYN 1037
Query: 400 LLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
LI LG A A K++ L + TY ALI + +G+ D+A +YK M
Sbjct: 1038 ALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVG 1097
Query: 458 GIHPSLGTF 466
G P+ GTF
Sbjct: 1098 GCRPNTGTF 1106
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 148/356 (41%), Gaps = 32/356 (8%)
Query: 143 MKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+K L + + +A +V+ ++ + + P+ Y L++ L++A E A +F KM+ AG
Sbjct: 759 VKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAG 818
Query: 202 VQPDKAACNILIEKCCKAGETRTII-----LILRYMKENRLALRYPVFKEALQTFKVADE 256
PD N+ ++ K+G+ + + ++ R K N + +F L D+
Sbjct: 819 CTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIF--GLVKSNSLDK 876
Query: 257 NDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
L + + FSP T GPL ID LLK L
Sbjct: 877 AIDLYYDLMSGDFSP------------TPWTYGPL-IDG-----LLKLGRLEEAKQFFEE 918
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
++D + + + ++ + A F VK + + +Y ++ L +
Sbjct: 919 MLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGK 978
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYT 432
EE+ +G + L+I+ LG ++R A +F + ++ T TY
Sbjct: 979 VDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM-RNRGITPDLYTYN 1037
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
ALI AG ++A K+Y+ + KG+ P++ T+N L+ G G A +Y+K
Sbjct: 1038 ALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKK 1093
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F+ + R+RG D +TY ++ G A + ++E +Q KG+ + TY
Sbjct: 1014 VEEALSLFDEM-RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYN 1072
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+++ S +G+ D A ++++M + C P ++
Sbjct: 1073 ALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 199/448 (44%), Gaps = 53/448 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW FF+ + ++ G D +YT+M+ + +A R+ + +F M+ + A Y
Sbjct: 262 VDMAWKFFHEL-KAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYN 320
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +A D A + E ++ + C P++VS+ + + L +V EA ++ +++++
Sbjct: 321 TMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKK 379
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN TY ++++ L AG+ EA +I +M+ AG+ P+ + NI++++ CKA +
Sbjct: 380 DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQ---- 435
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+EA + F+ A E + ++V + +
Sbjct: 436 ------------------LEEAHRIFESASERG---------------CNPNSVTYCSL- 461
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I+G L KK + L ++D + + +++I H R++
Sbjct: 462 IDG-----------LGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGH 510
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
++ ++ + T + + K K I E+M G V ++LIH L
Sbjct: 511 KIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570
Query: 406 GSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A + + IF + + Y A++ +G DKA ++ + M K +HP++
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
T+ ++ GL K+ R+ +A + +E KS
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKS 658
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 173/442 (39%), Gaps = 58/442 (13%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F S RG N + TY +++D G+ +I +FE M + G + + + YT
Sbjct: 436 LEEAHRIFESASE-RGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYT 494
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ G + I++EM + P + YM +F V++ ++++M
Sbjct: 495 SLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSF 554
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ +Y++L+ L +AG+ E IF M + G D A N +++ CK+G+
Sbjct: 555 GFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKA 614
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+L MK + VHP V +
Sbjct: 615 YEVLEEMK---------------------------VKHVHP-----------TVATYGSI 636
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
++G ID+ L L K I+L+ + S++I+ R D A
Sbjct: 637 VDGLAKIDR-----------LDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAY 685
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
L E +K L + +L+ L+K + + M + S Y ++LI+ L
Sbjct: 686 LILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGL 745
Query: 406 GSARRPVPAAKIFSLLPEDQK-----CTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
++ K F E QK TYT +I G+ A +++ G
Sbjct: 746 CRVQK---YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGI 802
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P +FN L+ G+ R +A
Sbjct: 803 PDSASFNALIEGMSNANRPMEA 824
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 176/422 (41%), Gaps = 26/422 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++D+ A R++ + + M+ G+ + ++ ++ L A ++ A I+E
Sbjct: 387 TYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA 446
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P V+Y + + L ++ +A ++++M+ G N YT L+ G+
Sbjct: 447 SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRK 506
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
E+ +I+ +M G +PD N ++ KAGE I MK Y +
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSIL 566
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL-VLILLKK 303
L A E ++ + Q F D A V + +D+ VL +K
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQ---GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKV 623
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
K++ + I+D ++D R D A + FE + + L Y
Sbjct: 624 KHVHPTVATYGSIVDGLAKID---------------RLDEAYMLFEEAKSKGIELNVILY 668
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+LI K+ + I+EEM K G + VY L+ L A F + E
Sbjct: 669 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKE 728
Query: 424 DQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
KC T TY+ LI +KA ++ M ++G+ P++ T+ +++GL K+G ++
Sbjct: 729 -MKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNIT 787
Query: 481 DA 482
DA
Sbjct: 788 DA 789
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 175/453 (38%), Gaps = 65/453 (14%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ Y TM+ +G A+R + E ++E+G V++ S++ L VD A+ +++
Sbjct: 317 YAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDV 376
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK K+ P I +Y + +L + RV EA + EM GL PN + ++++ L +A +
Sbjct: 377 MK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQ 435
Query: 187 YEEALEIFSKMQEAGVQPDKAA-CNI---------------LIEKCCKAGETRTII---- 226
EEA IF E G P+ C++ L EK AG I
Sbjct: 436 LEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTS 495
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADEN------DSLLWQVHPQFSPEFISDNDAVE 280
LI + R + ++KE ++ D D + + D +
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFG 555
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
F+ D+ + GL K ++ + + LD+ + +++ C +
Sbjct: 556 FLP-DVRSYSILIHGLT----KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D A E ++ Y +++ L K++ + + EE G L V L
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVIL--- 667
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
Y++LI + G D+A I + M +KG+
Sbjct: 668 ------------------------------YSSLIDGFGKVGRIDEAYLILEEMMKKGLT 697
Query: 461 PSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
P++ T+N L+ L K + +A I + K ++
Sbjct: 698 PNVYTWNSLMDALVKTEEIDEALICFQSMKEMK 730
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 172/445 (38%), Gaps = 31/445 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
YT ++ EA++ + MQ+ G + +T+++ L+ G ++ A+ + +E+
Sbjct: 178 AYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEV 237
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P IV Y + V A + E+ GL P+ +YT ++ L +AG+
Sbjct: 238 KGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRL 297
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA E+F +M+ P A N +I A +L ++E F
Sbjct: 298 GEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSI 357
Query: 248 LQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
L + DE +L + P + N ++ + G V K +
Sbjct: 358 LTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCM---------AGRVNEAYKIR 408
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + + L ++ +I +D C + + A FE + + N Y
Sbjct: 409 DEMELAGLFPNLLSVNIMVDRL---------CKANQLEEAHRIFESASERGCNPNSVTYC 459
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL--- 421
+LI L K + E+M AGH + LI R KI+ +
Sbjct: 460 SLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRR 519
Query: 422 --PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
D TY + F AG +K I++ M G P + ++++L+ GL K G+
Sbjct: 520 GGRPDLTLLNTYMDCV---FKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQA 576
Query: 480 SD-AEIYRK-EKKSIQADALSKDAV 502
+ + I++ ++ DA + +AV
Sbjct: 577 RETSNIFQAMSQQGFALDARAYNAV 601
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 181/479 (37%), Gaps = 40/479 (8%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
+P + + S S+ D Y +L + +++++ V E M G +
Sbjct: 87 NPSLAAPFFLLASASSSQPLPPD--AYNAVLPFL--SHDLAALEKVLEEMSHLGYGLPNP 142
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
+++ L + ++ A + M+ + P +YT + L + + A ++ ++M
Sbjct: 143 ACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQM 202
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
G + +T L+ L R G+ E AL + +++ + ++PD N+ I+ KAG
Sbjct: 203 QDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSV 262
Query: 223 RTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQFS-PEFISDN-- 276
+K + L + Y L E + L Q+ + P + N
Sbjct: 263 DMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTM 322
Query: 277 -----------DAVEFVTTDIEG---PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
DA + + E P + +L L KK V L +M K +
Sbjct: 323 IMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAK 382
Query: 323 LDSAVISTIIEVNCDHRR-------RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ + + II++ C R RD LA + + +N+ ++ L K N
Sbjct: 383 PNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNI-------MVDRLCKANQ 435
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKCTA-TYTA 433
+ I E ++ G + LI LG + A ++F +L YT+
Sbjct: 436 LEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTS 495
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
LI +F G + KIYK M R+G P L N + + K G V ++ KS
Sbjct: 496 LIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSF 554
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 197/451 (43%), Gaps = 46/451 (10%)
Query: 61 GFNHDRFTYTTML-DIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDV 117
G+ D F+Y ++ + E K +++ + + + G N + V+Y +V+ G+V
Sbjct: 157 GYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEV 216
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++ EM + P +V+Y + + L + +A + + M +G+ P+ TY ++
Sbjct: 217 DKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIM 276
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ G+ EEA+ + KM +G+QPD ++LI+ CK G R
Sbjct: 277 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIG---------------RC 321
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQV--HPQFSPEFISD-NDAVEFVTTDIEGPLSIDQ 294
A VF ++ + +S ++ + H + + D D ++ + D P
Sbjct: 322 AEARSVFDSMVRK---GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD-GIPFEHRA 377
Query: 295 GLVLILLKKKNLVAIDSLLSGIMD---KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+LI K+ A+D ++ + ++ D ST+I + C R + A+ F
Sbjct: 378 FNILICAYAKH-GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARR 410
V L+ ++ +LI L + + KV E+ EM G H +++ ++ L R
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIM-DNLCKEGR 495
Query: 411 PVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
V A F ++ P+ +Y LI Y G D+++K M G+ P
Sbjct: 496 VVEAQDFFDMVIHIGVKPD----VVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSW 551
Query: 465 TFNVLLAGLEKLGRVSDA-----EIYRKEKK 490
T+N LL G K GRV DA E++RK+ K
Sbjct: 552 TYNSLLNGYFKNGRVEDALALYREMFRKDVK 582
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 184/447 (41%), Gaps = 57/447 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA+ F+ + +G D TY +++D +A+ + + + M +KG+ D TY
Sbjct: 216 VDKAYFLFHEMM-GQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYN 274
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + G ++ AV + ++M P +V+Y+ ++ R EA V+ M+++
Sbjct: 275 IMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRK 334
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN Y +L+ G + ++ M G+ + A NILI K G
Sbjct: 335 GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 394
Query: 226 ILILRYMKENRL---ALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+ M++N L + Y L +T +V D V SP IS
Sbjct: 395 MTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIIS------- 447
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
T+ I G SI + KK ++ L ++++ I D+ ++TI++ C R
Sbjct: 448 FTSLIHGLCSIGE------WKK-----VEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
A F+ + + + + +Y LI G
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLID-----------------------------GYCF 527
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
+ ++ + + + L P+ + TY +L+ YF G + AL +Y+ M RK +
Sbjct: 528 VGKMDESIKQLDRMVSIGLRPD----SWTYNSLLNGYFKNGRVEDALALYREMFRKDVKF 583
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRK 487
T N++L GL + GR+ A E+Y K
Sbjct: 584 CAITSNIMLHGLFQAGRIVAARELYMK 610
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 172/443 (38%), Gaps = 83/443 (18%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H ++KA F + R G D +Y+T++ I + R+ Y F M +G++ + +
Sbjct: 388 HGAVDKAMTAFTEM-RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
++TS++H L + G+ + EM + +P + M L RV EA D + +
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
I G+ P+ +Y L++ GK +E+++ +M G++PD N L+ K G
Sbjct: 507 IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRV 566
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
E+ LAL +F++ ++ F + +
Sbjct: 567 -----------EDALALYREMFRKDVK----------------------FCA-------I 586
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
T++I ++ L + +VA L ++D+ QL +T++ C++ D
Sbjct: 587 TSNI---------MLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVD 637
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
AL FE + L+ + +I L+K+ + + M G
Sbjct: 638 EALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRG------------ 685
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
PVP TY+ +I + G +++ ++ +M + G
Sbjct: 686 --------PVPD-------------VITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAAD 724
Query: 463 LGTFNVLLAGLEKLGRVSDAEIY 485
N+++ L + G V A Y
Sbjct: 725 SHMLNIIVRRLLEKGDVRRAGTY 747
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 106/221 (47%), Gaps = 4/221 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D + ++ ++ DS+T N +L + +E A + + R + T ML +
Sbjct: 539 DRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFR-KDVKFCAITSNIMLHGLFQ 597
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A RI + + ++ M ++G + TY +V+ L VD A+ ++E+++ KE + +
Sbjct: 598 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRT 657
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
++ + L R+ EA ++ M+ RG P+ TY+++++ + G EE+ +F M+
Sbjct: 658 FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSME 717
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G D NI++ + + G+ R L + E +L
Sbjct: 718 KNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSL 758
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/376 (18%), Positives = 143/376 (38%), Gaps = 41/376 (10%)
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE-------ALEIFSKMQEAGVQPD 205
++A +++ E++ + P + + + ++ + RA A+ +F+ M +GV
Sbjct: 31 EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND---SLLW 262
A ILI C G + ++ + ++ + D +++
Sbjct: 91 AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVF 150
Query: 263 QVHPQ--FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
+ P+ ++P+ S N ++ +GL ++KK+ A++ L+ D
Sbjct: 151 RRMPELGYTPDVFSYN--------------ALIKGLC---VEKKSQEALELLIHMTADGG 193
Query: 321 IQLDSAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
V+S T+I+ D A F + L + Y +LI L K K
Sbjct: 194 YNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDK 253
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIG 436
I++ M G ++I S + A ++ + Q TY+ LI
Sbjct: 254 AVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQ 313
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADA 496
Y G +A ++ +M RKG P+ +++LL G G + D D
Sbjct: 314 YYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL--------LDL 365
Query: 497 LSKDAVPMEEKICDLL 512
+ +D +P E + ++L
Sbjct: 366 MIRDGIPFEHRAFNIL 381
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 68/146 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+L E + +FE ++ K +D T++ V++ L G +D A +++ M
Sbjct: 622 TYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAM 681
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L+ P +++Y+ +K ++E+ +++ M + G + + +++ L+ G
Sbjct: 682 VLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDV 741
Query: 188 EEALEIFSKMQEAGVQPDKAACNILI 213
A +K+ E + + +LI
Sbjct: 742 RRAGTYLTKIDEKNFSLEASTAALLI 767
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 193/472 (40%), Gaps = 36/472 (7%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINI 99
+ H P E A FF + R+ G D +L F EAKR ++ + E G
Sbjct: 123 RAHRP-ELALAFFGQLLRT-GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVP 180
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATD 157
D +Y+ ++ L + G A ++ M C P +V+Y + F V +A D
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACD 240
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
++KEM+QRG+PP+ TY+ ++ L +A ++A +M GV P+ N LI
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300
Query: 218 KAGETRTIILILRYMKENRL-------------ALRYPVFKEALQTFKVADENDSLLWQV 264
G+ + + + + M+ + +Y KEA F + ++ Q
Sbjct: 301 STGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVF----DTMAMKGQN 356
Query: 265 HPQFSPEFISDNDAVEFVTTDIEG--PLSIDQGLVLILLKKKNLV---AIDSLLSGIM-- 317
FS + + A + D+ L + G+ ++ L+ A +L M
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMII 416
Query: 318 -----DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
D ++ + +T+I C + D A+ F + + ++ AY LI
Sbjct: 417 FNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTAT 430
+ K E++ E+ G L + L + +I+ L R + A IF L
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV 536
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y+ L+ Y G +KAL+++ M GI P+ + L+ G K+GR+ +
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 176/429 (41%), Gaps = 55/429 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++++ +A+ + + M KG+ + TY ++++ S+ G
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +++EM+ + P +V++ M L ++KEA DV+ M +G P+ ++Y +++
Sbjct: 308 AVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
G + ++F M G+ P N+LI+ G ++I M+++ +
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427
Query: 238 -ALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
L Y AL + K+ D + + +P+ + + ++ T
Sbjct: 428 NVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS-------- 479
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
LLK K L+ S IM+ + LD + S+II C R A F+ +V +
Sbjct: 480 ----LLKAKELI------SEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L+ Y L+ + K + + M AG
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------------------------- 564
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ P D Y L+ Y G D+ L +++ M +KGI PS +N+++ GL +
Sbjct: 565 ----IEPND----VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616
Query: 476 LGRVSDAEI 484
GR A++
Sbjct: 617 AGRTVPAKV 625
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 209/491 (42%), Gaps = 33/491 (6%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPM---EKAWLFFNWVSRS 59
S V+ + K D A+ L+ + K +++T N ++ + ++A F + R
Sbjct: 259 SVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR- 317
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ D T+ ++ + +I + VF+ M KG N D +Y +++ + G +
Sbjct: 318 QSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 377
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
++++ M P I ++ +K + +A ++ EM G+ PN TYT ++
Sbjct: 378 MTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIA 437
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L R GK ++A+E F++M + GV PDK A + LI+ C G ++ + N + L
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL 497
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+F + +V D + V+ P T + + +D G
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP-------------TAVVYSMLMD-G 543
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ +K L D+++S I+ + V T++ C R D L F ++
Sbjct: 544 YCLVGKMEKALRVFDAMVSA----GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 356 LNLERTAYLALI-GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ Y +I G+ T P + EMT++G ++ ++++ L R A
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKF-HEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 658
Query: 415 AKIF-SLLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+F L + K T +I F ++A ++ ++ R G+ P + T+++++
Sbjct: 659 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718
Query: 473 LEKLGRVSDAE 483
L K G V +AE
Sbjct: 719 LIKEGLVEEAE 729
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G Y ++D EA R K F M E GI ++ TY+ V+ L D
Sbjct: 598 KGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDE 657
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++E++ I++ + +F RV+EA D++ + + GL P TY++++
Sbjct: 658 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMIT 717
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ G EEA ++FS MQ AG +PD N ++ + K E
Sbjct: 718 NLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 759
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 143/345 (41%), Gaps = 28/345 (8%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P +TY +LM+ RA + E AL F ++ G++ D N L++ C+A T
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 164
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDS--------LLWQVHPQFSPEFISDN 276
+ IL + + L VF ++ + D+ S ++ + SP+ ++ N
Sbjct: 165 ALDILLH-RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYN 223
Query: 277 DAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ E V I +V L K + + ++ L +++K
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ ++ + +I + A+ F+ + + + + L+G L K +
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEA 343
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGV 437
++ + M G + V+ ++++ + V +F L+ D T+ LI
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 403
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y + G DKA+ I+ M G+ P++ T+ ++A L ++G++ DA
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDA 448
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 190/473 (40%), Gaps = 73/473 (15%)
Query: 21 QDLLKNLP-------IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
+D + NLP + + V K M++A LF N T M+
Sbjct: 264 RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR-----------TINIMI 312
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
D +A+++ +FE M K + D T+ S++ L G VD A I+E M +
Sbjct: 313 DRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI 372
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P +V YT+ ++ F DR ++ +YKEM++ G P+ M+ + +AG+ E+ +
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-K 252
F +++ G PD + +ILI KAG R + MK+ L + + F K
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
N + +Q+ +E + T P + G V+ L ID L
Sbjct: 493 SGKVNKA--YQL--------------LEEMKTMGHHPTVVTYGSVV-----DGLAKIDRL 531
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
D A + FE + + L + Y +LI K
Sbjct: 532 -----------------------------DEAYMLFEEAKSNGIELNQVIYSSLIDGFGK 562
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--- 429
+ + ++EEM + G + VY L+ L A A F + +D KCT
Sbjct: 563 VGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSM-KDLKCTPNQI 621
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY LI +KA ++ M ++G+ P+ T+ +++GL K G V+ A
Sbjct: 622 TYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQA 674
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 189/469 (40%), Gaps = 54/469 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ + TT++ +F R+ + + + M+ + D V Y + G VD A
Sbjct: 91 GYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMA 150
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EMK P V+YT+ M +L +R+ EA +++++M Q P Y Y ++
Sbjct: 151 WKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMG 210
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
AGK++EA + + + G P A N ++ K G+T + I MK + +
Sbjct: 211 YGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMP-N 269
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
P + + A N ++V + N T +I ID+ L
Sbjct: 270 LPTYNIIIGMLCKAG-NVEAAFKVRDAMKEAGLFPN----VRTINI----MIDR-----L 315
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K + L S+ G+ K D A ++I+ R D A +E + D
Sbjct: 316 CKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNV 375
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHS-----LGVYL-----------GALLIHR 404
Y +LI K + ++ +EM ++G S L Y+ G L
Sbjct: 376 VVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE 435
Query: 405 LGSARRPVPAAKIFSLL-------------------PEDQKC---TATYTALIGVYFSAG 442
+ AR +P + +S+L +DQ C T Y +I + +G
Sbjct: 436 I-KARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSG 494
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+KA ++ + M G HP++ T+ ++ GL K+ R+ +A + +E KS
Sbjct: 495 KVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 543
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW FF+ + ++ G D TYT+M+ + +A R+ +FE M++ A Y
Sbjct: 147 VDMAWKFFHEM-KANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYN 205
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +AG D A ++ E + K C P++V+Y + L + +A +++EM +R
Sbjct: 206 TMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KR 264
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
PN TY +++ L +AG E A ++ M+EAG+ P+ NI+I++ CKA
Sbjct: 265 DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKA 318
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A++ F ++S G ++ Y++++D FG+ R+ V E M +KG+ + T+
Sbjct: 531 LDEAYMLFEE-AKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWN 589
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L A +++ A+ ++ MK +C P ++Y + L + +A ++EM ++
Sbjct: 590 CLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQ 649
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
GL PN TYT ++ L ++G +A +F + + +G PD A+ N +IE
Sbjct: 650 GLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIE 698
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 76/160 (47%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +T+ +LD +A+ I+ F+ M++ + +TY +++ L +
Sbjct: 579 KGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNK 638
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A W+EM+ + P ++YTA + L + V +A+ +++ G P+ +Y ++E
Sbjct: 639 AFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIE 698
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L A + +A ++F + + G C L++ KA
Sbjct: 699 GLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKA 738
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 123/307 (40%), Gaps = 23/307 (7%)
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+VR ++ +I +M AG P C L+ C K+ + +L+ M+ +
Sbjct: 1 MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + + E+D +L + Q N V +TT L+ +
Sbjct: 61 FSAYTTLIGALSEVGESDRML-ALFNQMQELGYEVN--VHLLTT-----------LIRVF 106
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
++ + A SLL + + D + + I+ + D A F L +
Sbjct: 107 SREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDD 166
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y +++G+L K N + EI E+M + Y +I GSA + A +SL
Sbjct: 167 VTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEA---YSL 223
Query: 421 LPEDQK--CTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
L + C + Y ++ G DKAL+I++ M R + P+L T+N+++ L K
Sbjct: 224 LERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCK 282
Query: 476 LGRVSDA 482
G V A
Sbjct: 283 AGNVEAA 289
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 154/395 (38%), Gaps = 34/395 (8%)
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
I EM + PT + + + ++ EA D+ + M P YT L+ L
Sbjct: 12 QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
G+ + L +F++MQE G + + LI + G + +L MK N
Sbjct: 72 SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS----IDQGLV 297
++ + F + D + W+ + + +D T + G L +D+ +
Sbjct: 132 VLYNVCIDCFGKVGKVD-MAWKFFHEMKANGLVPDDV---TYTSMMGVLCKANRLDEAVE 187
Query: 298 LILLKKKN-----LVAIDSLL-----SGIMDKSIQL-----DSAVISTIIEVNC------ 336
+ ++N A ++++ +G D++ L I +++ NC
Sbjct: 188 IFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLG 247
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ D AL FE +K D Y +IG+L K ++ + M +AG V
Sbjct: 248 KKGKTDKALRIFE-EMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR 306
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKT 453
++I RL A++ A IF + + + C+ AT+ +LI G D A +IY+
Sbjct: 307 TINIMIDRLCKAQKLDEACSIFEGM-DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYER 365
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
M P++ + L+ K R D KE
Sbjct: 366 MLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKE 400
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 73/135 (54%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
++ TY +++ + ++ + ++ MQ++G+ + +TYT+++ L+ +G+V A +++
Sbjct: 619 NQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLF 678
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E + P SY A ++ L + +R +A +++E +G + T L++ L +A
Sbjct: 679 ERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKA 738
Query: 185 GKYEEALEIFSKMQE 199
E+A + + ++E
Sbjct: 739 ECLEQAAIVGAVLRE 753
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA++F+ + + +G + TYT M+ ++ ++ +FE + G D+ +Y ++
Sbjct: 638 KAFVFWQEMQK-QGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAM 696
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKEC 132
+ LS A A ++EE +LK C
Sbjct: 697 IEGLSIANRALDAYQLFEETRLKGC 721
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 201/482 (41%), Gaps = 53/482 (10%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTY 104
++ A+ FF + R +G D +++L +AKR ++ +F M E G DA++Y
Sbjct: 119 LDLAFAFFGCLLR-QGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISY 177
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKE---CYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
++V+ + + G A++I M +K+ C +V Y+ + LF +V EA D++ E
Sbjct: 178 STVLKSVCDDGRSQWALDILR-MAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHE 236
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M Q+G+PPN TY ++ L +A ++A I +M GVQPD N LI G+
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 222 TRTIILILRYMKENRLA-------------LRYPVFKEALQTFKVADENDSLLWQVHPQF 268
+ + + + M + ++ +EA + F DS+L + H
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF------DSMLAKGHKL- 349
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV----AIDSLLSG--------- 315
IS + + T G L +D + L+ + +V + L++G
Sbjct: 350 --NIISYSTLLHGYAT--AGCL-VDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVRE 404
Query: 316 -------IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ + + D +I C D A+ F + + + Y LI
Sbjct: 405 AMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQ 464
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL--PEDQK 426
K E+V E+ G + A LI+ L R A +IF ++ ++
Sbjct: 465 GFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKA 524
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
+T+LI Y G +A +++ M GI P + T+ L+ G K GR+ D I
Sbjct: 525 DVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILF 584
Query: 487 KE 488
+E
Sbjct: 585 RE 586
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 114/525 (21%), Positives = 227/525 (43%), Gaps = 38/525 (7%)
Query: 6 SNVYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRS 59
S ++ + K D AQ +L+ + ++ D+ T N ++ + + ++A F ++ S
Sbjct: 251 SVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMT-S 309
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + T +T + + RI + F+ M KG ++ ++Y++++H + AG +
Sbjct: 310 RGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVD 369
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
N++ M P + + V+EA ++++M +RGL P+ TY ++
Sbjct: 370 MSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIH 429
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG----------ETRT----- 224
R G ++A++ F+ M + GV+P+ A LI+ C G E R
Sbjct: 430 AFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGP 489
Query: 225 -----IILILRYMKENRLALRYPVFKEALQTFKVADEN--DSLL--WQVHPQFSPEFISD 275
LI KE R+ +F ++T + AD N SL+ + + + S F
Sbjct: 490 CILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAF-RV 548
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+DA+ V+ IE + LV K + L ++ K ++ + I++
Sbjct: 549 HDAM--VSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGL 606
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R A F+ ++ + + Y L+ L + N + + +++ +
Sbjct: 607 FHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDI 666
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKT 453
+ ++I ++ ARR A +F+ +P+ TYT ++ GS ++A ++
Sbjct: 667 VILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSV 726
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY--RKEKKSIQADA 496
M + G+ P+ NV++ L + G + A IY R + KSI +A
Sbjct: 727 MLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEA 771
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 181/452 (40%), Gaps = 51/452 (11%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S V+ + K E LF + G + TY +++ +A+ + + + M
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQ--GVPPNVVTYNSVIHALCKARAVDKAQGILRQM 272
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
G+ D VTY +++H S G AV +++EM + P V+ + ++ L + R+
Sbjct: 273 VGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRI 332
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA + + M+ +G N +Y+ L+ AG + +F+ M G+ P++ NIL
Sbjct: 333 EEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNIL 392
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPE 271
+ K G R + I M++ L + + F ++ +D++ +F+
Sbjct: 393 VNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAM-----DKFN-- 445
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ +E ++ Q L+ +LV + L+ I +K + +++
Sbjct: 446 --------HMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASL 497
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I C R FE D+ + RT A +N F + +
Sbjct: 498 INHLCKEGR------VFEAQRIFDM-IIRTGEKA------DVNIFTSLID---------- 534
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
G LI ++ A R A + P+ TY L+ G D L ++
Sbjct: 535 ------GYCLIGKMSEAFRVHDAMVSVGIEPD----IVTYGTLVNGCCKNGRIDDGLILF 584
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ + KG+ P+ T+ ++L GL GR + A+
Sbjct: 585 RELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/382 (18%), Positives = 137/382 (35%), Gaps = 68/382 (17%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
PT+ +Y+ + R+ A + ++++G+ + + L+ L A + +EA+++
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 194 -FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA----------LRYP 242
F +M E G PD + + +++ C G ++ + ILR + + +
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+FKE KV + D P ++ N + L K
Sbjct: 221 LFKEG----KVGEACDLFHEMTQQGVPPNVVTYNSVIH------------------ALCK 258
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+ + +L ++ +Q D+ +T+I + A+ F+ +
Sbjct: 259 ARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
+ L K + E + M GH L +
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNII-------------------------- 352
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+Y+ L+ Y +AG ++ M R GI P+ FN+L+ G K G V +A
Sbjct: 353 -------SYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREA 405
Query: 483 EIYRK--EKKSIQADALSKDAV 502
+ +K+ + D L+ AV
Sbjct: 406 MFIFEDMQKRGLNPDVLTYLAV 427
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 195/490 (39%), Gaps = 72/490 (14%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINI 99
+ H P E A FF + R+ G + +L+ F EAKR ++ + E G
Sbjct: 126 RAHRP-ELALAFFGQLLRT-GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVP 183
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLNDRVKEATD 157
D +Y+ ++ L + G A ++ M C P +V+Y + F V +A D
Sbjct: 184 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 243
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRA--------------------------------- 184
++KEM+QRG+PP+ TY ++ L +A
Sbjct: 244 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 303
Query: 185 --GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLAL 239
G+++EA+ +F +M+ + PD ++L+ CK G E R + + +N
Sbjct: 304 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 363
Query: 240 RYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQGLV 297
Y + T + D D + +P+F + N ++ + + +D+ ++
Sbjct: 364 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM-----LDKAMI 418
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ + + D ++ D T+I C + D A+ F + +
Sbjct: 419 --------------IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 464
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
++ AY LI + K E++ E+ G L + + +I+ L R + A I
Sbjct: 465 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 524
Query: 418 FSL-----LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
F L L D Y L+ Y G +KAL+++ M GI P++ + L+ G
Sbjct: 525 FDLTVNVGLHPD---AVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNG 581
Query: 473 LEKLGRVSDA 482
K+GR+ +
Sbjct: 582 YCKIGRIDEG 591
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 170/429 (39%), Gaps = 55/429 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY +++ +A+ + + M K + + TY ++++ S+ G
Sbjct: 251 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 310
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +++EM+ P +V+ + M L ++KEA DV+ M +G P+ ++Y +++
Sbjct: 311 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 370
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G + ++F M G+ PD N+LI+ G ++I M+++ +
Sbjct: 371 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 430
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
++ + K+ D + + +P+ + N ++ T
Sbjct: 431 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS-------- 482
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
LLK K L+ S IM+ + LD S+II C R A F+ +V +
Sbjct: 483 ----LLKAKELI------SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L+ + Y L+ + K + + M AG V
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV-------------------- 572
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
Y L+ Y G D+ L +++ M ++GI PS +++++ GL +
Sbjct: 573 -------------VGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFE 619
Query: 476 LGRVSDAEI 484
GR A++
Sbjct: 620 AGRTVPAKM 628
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/515 (20%), Positives = 203/515 (39%), Gaps = 58/515 (11%)
Query: 12 LKYSTWDSAQDLLKNL---PIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHD 65
K + A DL K + I D T N V L M+KA F + R ++
Sbjct: 233 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 292
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
+TY ++ + + VF+ M+ I D VT + +M L G + A ++++
Sbjct: 293 -WTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
M +K P + SY + + + TD++ M+ G+ P+ YT+ VL++ G
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
++A+ IF++M++ GV+PD +I C+ G+ + M + +A +
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+Q F + SLL + E IS E + + + ++ L K
Sbjct: 472 CLIQGFCT---HGSLLK------AKELIS-----EIMNNGMHLDIVFFSSIINNLCKLGR 517
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
++ ++ ++ + D+ V + +++ C + + AL F+ V + Y
Sbjct: 518 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 577
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
L+ K+ + + EM + G L +++I L A R VPA F + E
Sbjct: 578 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESG 637
Query: 425 -----------------QKC-------------------TATYTALIGVYFSAGSADKAL 448
+C T +I F ++A
Sbjct: 638 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 697
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++ ++ R + PS+ T+++++ L K G V +AE
Sbjct: 698 DLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 732
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG Y+ ++D EA R K F M E GI +D TY V+ L D
Sbjct: 601 RGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDE 660
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++E++ I++ + +F RV+EA D++ + + L P+ TY++++
Sbjct: 661 AIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMIT 720
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ G EEA ++FS MQ AG +P+ N ++ + K E
Sbjct: 721 NLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 762
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 141/345 (40%), Gaps = 28/345 (8%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P +TY +LM+ RA + E AL F ++ G++ + N L+E C+A T
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDS--------LLWQVHPQFSPEFISDN 276
+ IL + + L VF ++ + D+ S ++ + SP ++ N
Sbjct: 168 ALDILLH-RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 226
Query: 277 DAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ E V I L +V L K + + ++ L +++K
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ ++ + +I + A+ F+ + + + L+G L K +
Sbjct: 287 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT--ALIGV 437
++ + M G + V+ ++++ + V +F L+ D YT LI
Sbjct: 347 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 406
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y + G DKA+ I+ M G+ P + T+ ++A L ++G++ DA
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 4/219 (1%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRG 61
I+N+ K+ + + DL N+ + D+ N ++ + MEKA F+ + S G
Sbjct: 509 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV-SAG 567
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ Y T+++ + + RI +F M ++GI + Y+ ++ L AG A
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EM I +Y ++ LF N EA ++KE+ + N T +++ +
Sbjct: 628 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGM 687
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ + EEA ++F+ + + + P +I+I K G
Sbjct: 688 FQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEG 726
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
Y +I +F G +KA ++K M ++GI P L T+N ++ L K + AE + ++
Sbjct: 224 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ- 282
Query: 490 KSIQADALSKDAVPMEEKICDLLYG 514
++K +P +L+YG
Sbjct: 283 ------MVNKRVLPNNWTYNNLIYG 301
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 205/465 (44%), Gaps = 41/465 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D Y T++ F A ++ + + V ++M+E G++ + TYT + + V+
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++E M +V+ +A + L + R EA +++EM + G PN TY L+
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLI 316
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L +AG+ +E L + +M GV D L++ K G+T + LR+ + L+
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376
Query: 239 LR---YPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVE-FVTTDIEGPLSID 293
L Y V +AL DE + +L ++ + SP ++ + + FV + +D
Sbjct: 377 LNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL-----LD 431
Query: 294 QGLVLILLKKK-----NLVAIDSLLSGIM-----DKSIQLDSAVISTIIEVN-------C 336
+ + K+ N+V +L+ G D ++++ ++ +EVN
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLV 491
Query: 337 DHRRRDG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE-----MT 387
+ R++G A+ F+ + L+L+ Y LI L K P + +E M
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551
Query: 388 KAGHSLGVYLGALLI-HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
V++ L I + A+ + + L P+ +TY +I + G K
Sbjct: 552 PDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQ----STYNTMIVSHCRKGETAK 607
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
ALK+ M I P+L T+N L+AGL G V A+ E S
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 201/451 (44%), Gaps = 41/451 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG N + TY T++D F + + + V+ M +G+ ++ S+++ L G +
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKI 500
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ ++++ V+YT + LF + A +E++ R + P+ Y V
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L GK++EA I ++M+ G++PD++ N +I C+ GET + +L MK + +
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVE------------- 280
+ Y L ++ LL + V FSP ++ ++
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680
Query: 281 ----FVTTDIEGPLSIDQGLVLIL----LKKKNLVAIDSLL-SGIMDKSIQLDSAVISTI 331
+ + +++ L+ +L + +K V ++ +L SGI +I ++ ++
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG-- 738
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
+C D A + + +++ + L+G L + + ++ EM K+G
Sbjct: 739 ---HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSAD 445
+L+ G V A +++ +P+ +TY ALI + AG
Sbjct: 796 EPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPK----VSTYNALISDFTKAGMMT 851
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+A +++K M ++G+HP+ T+++L++G ++
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 189/462 (40%), Gaps = 68/462 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +A + + V M+EK I+ + VT++SV++ G +D A M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + P +V+Y + F A +VY +M+ G+ N + L+ L + GK
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKI 500
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR-YMKENRL--ALRYPVF 244
EEA+ +F +G+ D LI+ KAG+ T + M N L A+ Y VF
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 245 KEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK- 302
L E S+L ++ P D + T + + L LL
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKP------DQSTYNTMIVSHCRKGETAKALKLLHE 614
Query: 303 ------KKNLVAIDSLLSGI-----MDKSIQLDSAVIST-----------IIEVNCDHRR 340
K NL+ ++L++G+ ++K+ L + ++S +++ RR
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D L E+ + L+ + T Y L+ +L K ++EEM
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM-------------- 720
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LGS P T T+ ALI + + D A Y M + I
Sbjct: 721 ----LGSGIAPD---------------TITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKD 500
P++ TFN LL GLE +GR+ +A + EK ++ + L+ D
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 24 LKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEA 79
++N+ +K D T N ++ +H KA + + S + TY T++ +FG
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS-IKPNLITYNTLVAGLFGTG 638
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ KY+ M G + ++T+ V+ S + +D ++I E M + I Y
Sbjct: 639 A-VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVY 697
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+++L + ++AT V +EM+ G+ P+ T+ L+ ++ + A +++M
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 200 AGVQPDKAACNIL---IEKCCKAGETRTIIL 227
+ P+ A N L +E + GE T+++
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLI 788
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 1/200 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ QVL H KA + + S G D T+ ++ ++ + + + M
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGS-GIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+ I+ + T+ +++ L + G + A + EM+ P ++Y + E
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVE 817
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A +Y EM+ +G P TY L+ +AG +A E+F MQ+ GV P +IL+
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877
Query: 215 KCCKAGETRTIILILRYMKE 234
+ + L+ MKE
Sbjct: 878 GWSRIRNGTEVKKCLKDMKE 897
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T+L RI V M++ G+ + +TY ++ + A+ ++ EM
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEM 825
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + +Y A + + +A +++K+M +RG+ P TY +L+ R
Sbjct: 826 VGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNG 885
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
E + M+E G P K + + K G T
Sbjct: 886 TEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 83/204 (40%), Gaps = 10/204 (4%)
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
++L+ + + + D ++T++ C + + D A + + L+ + LI
Sbjct: 121 AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHA-LDVIGWNTLIAGY 179
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCT 428
++ P + + MT G + V L+ A + A + ++ E
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
ATYT I Y ++A +Y+ M R G+ + T + L+AGL + GR S+A +E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299
Query: 489 KKSIQADALSKDAVPMEEKICDLL 512
+ AVP C L+
Sbjct: 300 MDKV-------GAVPNHVTYCTLI 316
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 159/355 (44%), Gaps = 25/355 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D YTT++D F + +SS +F+ MQ++ I+ D +TYT+V+ L G V
Sbjct: 251 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 310
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EM K P V+YTA + ++KEA ++ +M+Q GL PN TYT L
Sbjct: 311 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 370
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
+ L + G+ + A E+ +M G++ + N L+ CKAG + +++ M+
Sbjct: 371 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 430
Query: 238 --ALRYPVFKEA-LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
A+ Y +A ++ ++ ++ L + + P ++ N + + G L +
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC--MSGMLEDGE 488
Query: 295 GLVLILLKK-------------------KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
L+ +L+K N+ A + G+ K + D + +I+ +
Sbjct: 489 KLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGH 548
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
C R A V NL ++Y ALI K F + E+ E+M + G
Sbjct: 549 CKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 603
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 175/442 (39%), Gaps = 63/442 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +TY ++ + + +++ + V M +GI D V YT+++ G+V
Sbjct: 217 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 276
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++EM+ ++ P ++YTA + L RV EA ++ EM+ + L P+ TYT L++
Sbjct: 277 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 336
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ GK +EA + ++M + G+ P+ L + CK GE T +L M L L
Sbjct: 337 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 396
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + A D + + F DAV + T L+
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF--HPDAVTYTT------------LMDA 442
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K + +V LL ++D+ +Q + ++ C + ++ ++ +
Sbjct: 443 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
T Y +LI N EI M G
Sbjct: 503 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKG----------------------------- 533
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG------- 472
++P+ TY LI + A + +A +++ M KG + ++ ++N L+ G
Sbjct: 534 VVPDGN----TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 589
Query: 473 ---------LEKLGRVSDAEIY 485
+ + G V+D EIY
Sbjct: 590 LEARELFEQMRREGLVADREIY 611
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 127/330 (38%), Gaps = 59/330 (17%)
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+EM +GL PN YTY ++ L + GK EA + +M G+ PD LI+ CK
Sbjct: 212 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 271
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G + Y +F E +Q K+ SP+FI+
Sbjct: 272 GNVSSA---------------YRLFDE-MQKRKI---------------SPDFIT----- 295
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
T I G L + ++ D L ++ K ++ D + +I+ C
Sbjct: 296 --YTAVICG-----------LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEG 342
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ A ++M L Y AL L K E++ EM + G L +Y
Sbjct: 343 KMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 402
Query: 400 LLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
L++ L A A K+ P+ TYT L+ Y + +A ++ +
Sbjct: 403 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPD----AVTYTTLMDAYCKSREMVRAHELLRQ 458
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
M + + P++ TFNVL+ G G + D E
Sbjct: 459 MLDRELQPTVVTFNVLMNGFCMSGMLEDGE 488
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 152/398 (38%), Gaps = 53/398 (13%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ E MQ KG+ + TY V+ L G V A + EM + P V YT +
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
V A ++ EM +R + P+ TYT ++ L + G+ EA ++F +M ++PD+
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQV 264
LI+ CK G+ + + M + L + Y + L D + LL
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH-- 387
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
E +E + LV L K N+ L+ + D
Sbjct: 388 ---------------EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 432
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+ +T+++ C R + A E +M L+R ++ + +N F +
Sbjct: 433 AVTYTTLMDAYCKSRE---MVRAHELLRQM---LDRELQPTVVTFNVLMNGF-----CMS 481
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSA 444
M + G L ++ + +P A TY +LI Y +
Sbjct: 482 GMLEDGEKLLKWM---------LEKGIMPNA-------------TTYNSLIKQYCIRNNM 519
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+IY+ MC KG+ P T+N+L+ G K + +A
Sbjct: 520 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 557
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++ F + + + + + M EKGI +A TY S++ ++ I+ M
Sbjct: 470 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 529
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P +Y +K +KEA ++++M+ +G +Y L++ + K+
Sbjct: 530 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 589
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE 214
EA E+F +M+ G+ D+ NI +
Sbjct: 590 LEARELFEQMRREGLVADREIYNIFAD 616
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 13/215 (6%)
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
G++L+L K + + +L ++ + I D + +T+I+ C A F+ K
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT-KAGHSLGVYLGALLIHRLGSARRPV 412
++ + Y A+I L + + ++ EM K V AL+ +
Sbjct: 287 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK--- 343
Query: 413 PAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
+ FSL + + TYTAL G D A ++ MCRKG+ ++ T+N
Sbjct: 344 -MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYN 402
Query: 468 VLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
L+ GL K G + A K K ++ DAV
Sbjct: 403 SLVNGLCKAGNIDQAV---KLMKDMEVAGFHPDAV 434
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY +++ + + + ++ M KG+ D TY ++ A ++
Sbjct: 497 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 556
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M K T+ SY A +K + + EA +++++M + GL + Y + +
Sbjct: 557 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 616
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
GK E LE+ C+ IEKC
Sbjct: 617 INYDEGKMELTLEL---------------CDEAIEKC 638
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 101/178 (56%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N D FT++ ++D F + ++ + +++ M ++ I+ VTY+S+++ +D
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E M K C+P +V+Y +K RV+E +V++EM QRGL N TY +L++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L +AG + A EIF +M GV P+ N L++ CK G+ +++ Y++ +++
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 192/460 (41%), Gaps = 24/460 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F + +SR F ++ +L + + + + E MQ GI + TY+
Sbjct: 62 LDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ + A+ + +M P IV+ ++ + + R+ EA + +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN T+ L+ L K EA+ + +M G QPD +++ CK G+T
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISD------ 275
+L M++ +L L Y + L +K D+ +L ++ + P ++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 276 -------NDAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+DA ++ IE ++ D L+ +K+ LV + L ++ +SI
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S++I C H R D A FE+ V + Y LI K + E+
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
EM++ G +LI L A A +IF + D TY L+ G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+KA+ +++ + R + P++ T+N+++ G+ K G+V D
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 1/193 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F ++ F D TY T++ F + KR+ VF M ++G+ + V
Sbjct: 374 HDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY ++ L AGD D A I++EM P I++Y + L N ++++A V++ +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ + P YTY +++E + +AGK E+ ++F + GV+PD A N +I C+ G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 223 RTIILILRYMKEN 235
+ + MKE+
Sbjct: 553 EEADALFKEMKED 565
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I D +T ++ +K +E L+ V RS +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS--ID 358
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
TY+++++ F R+ K +FE M K D VTY +++ V+ + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+Y ++ LF A +++KEM+ G+PPN TY L++ L +
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+A+ +F +Q + ++P NI+IE CKAG+
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TY T+LD + ++ VFE +Q + TY ++ + AG V+
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +V+Y + +EA ++KEM + G PN Y L+
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G E + E+ +M+ G AG+ TI L+ + + RL
Sbjct: 579 RARLRDGDREASAELIKEMRSCGF----------------AGDASTIGLVTNMLHDGRL 621
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 178/428 (41%), Gaps = 24/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G T+ T+L +I +F+ M + G D +TY+++++ L G+ A
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++M+ K C P +V+Y + L + V EA D + EM++ G+PP+ +TY+ ++
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--- 237
G+ EA +F +M E V P+K ILI+ CK L+ M E L
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
Y + + DE L + + +P S N L
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNI------------------L 226
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ K + LL+ + KS+ D ST++ C R A + L
Sbjct: 227 INGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGL 286
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y ++ L K + E+++ M ++ +++ +LI + + + A +
Sbjct: 287 LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARE 346
Query: 417 IFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+FS + Q TYT +I G +++A ++++ M G P+ T+NV++ G
Sbjct: 347 LFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406
Query: 475 KLGRVSDA 482
+ G +A
Sbjct: 407 RNGDTPNA 414
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +AWL F ++ +G D +TY ++D + ++ + +F +M KG + +Y
Sbjct: 166 ISEAWLVFETMTE-KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYN 224
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +G +D A + EM K P I +Y+ M+ R +EA ++ KEM
Sbjct: 225 ILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY 284
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GL PN TY+++++ L + G +EA E+ MQE+ ++P+ ILIE C G+
Sbjct: 285 GLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGK 340
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 162/411 (39%), Gaps = 49/411 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + Y T++D + + ++ F M ++GI D TY+S++H N G V+
Sbjct: 74 KGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNE 133
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++++M + P V++T + L + EA V++ M ++GL P+ YTY L++
Sbjct: 134 ATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVD 193
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ +EA ++F+ M G P+ + NILI CK+G +L M L
Sbjct: 194 GYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTP 253
Query: 240 RYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ ++ F QV PQ + E + + + + I + +D
Sbjct: 254 DIFTYSTLMRGF----------CQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG---- 299
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L K +L LL + + I+ + + + +IE C + + A F +
Sbjct: 300 -LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y +I L+K + E+ EM G
Sbjct: 359 TVVTYTVMISGLLKGGLSNEACELFREMAVNG---------------------------- 390
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
LP + TY +I + G A+++ + M KG TF +L
Sbjct: 391 -CLPN----SCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TY+ +LD + + + + MQE I + YT ++ + G ++
Sbjct: 283 SYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLE 342
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ + +K PT+V+YT + L EA ++++EM G PN TY V++
Sbjct: 343 AARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVII 402
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+ +R G A+ + +M G D + +L
Sbjct: 403 QGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 130/331 (39%), Gaps = 55/331 (16%)
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M + GL P T+ L+ L K +A+++F +M + G +PD + +I CK G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
T + +L+ M+E P ++ N ++
Sbjct: 61 TTMALQLLKKMEEKGC-------------------------------KPNVVAYNTIID- 88
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
L K + + S ++ + I D S+I+ C+ R
Sbjct: 89 -----------------SLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
+ A F+ V+ ++ + + LI L K + + E MT+ G VY L
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCRK 457
+ S + A K+F+++ D+K A +Y LI + +G D+A + M K
Sbjct: 192 VDGYCSRSQMDEAQKLFNIM--DRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK 249
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ P + T++ L+ G ++GR +A+ KE
Sbjct: 250 SLTPDIFTYSTLMRGFCQVGRPQEAQELLKE 280
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 14/194 (7%)
Query: 20 AQDLLKN------LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
AQ+LLK LP V L H +++A+ + S+ + F YT ++
Sbjct: 274 AQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESK-IEPNIFIYTILI 332
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ ++ + + +F + KGI VTYT ++ L G + A ++ EM + C
Sbjct: 333 EGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCL 392
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P +Y ++ N A + +EM+ +G + T+ +L + E + EI
Sbjct: 393 PNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD-------LESSDEI 445
Query: 194 FSKMQEAGVQPDKA 207
S+ Q K
Sbjct: 446 ISQFMRGSSQDRKT 459
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 159/355 (44%), Gaps = 25/355 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D YTT++D F + +SS +F+ MQ++ I+ D +TYT+V+ L G V
Sbjct: 351 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 410
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EM K P V+YTA + ++KEA ++ +M+Q GL PN TYT L
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
+ L + G+ + A E+ +M G++ + N L+ CKAG + +++ M+
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530
Query: 238 --ALRYPVFKEA-LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
A+ Y +A ++ ++ ++ L + + P ++ N + + G L +
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC--MSGMLEDGE 588
Query: 295 GLVLILLKK-------------------KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
L+ +L+K N+ A + G+ K + D + +I+ +
Sbjct: 589 KLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGH 648
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
C R A V NL ++Y ALI K F + E+ E+M + G
Sbjct: 649 CKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 158/402 (39%), Gaps = 59/402 (14%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF E G+ + +Y + H L G V A + +M+L+ C P ++SY+ +
Sbjct: 240 VFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYC 299
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++ + +EM +GL PN YTY ++ L + GK EA + +M G+ PD
Sbjct: 300 QVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV 359
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
LI+ CK G + Y +F E +Q K+
Sbjct: 360 IYTTLIDGFCKLGNVSSA---------------YRLFDE-MQKRKI-------------- 389
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
SP+FI+ T I G L + ++ D L ++ K ++ D
Sbjct: 390 -SPDFIT-------YTAVICG-----------LCQTGRVMEADKLFHEMVCKRLEPDEVT 430
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I+ C + A ++M L Y AL L K E++ EM
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMC 490
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSA 441
+ G L +Y L++ L A A K+ P+ TYT L+ Y +
Sbjct: 491 RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD----AVTYTTLMDAYCKS 546
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+A ++ + M + + P++ TFNVL+ G G + D E
Sbjct: 547 REMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 176/432 (40%), Gaps = 48/432 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +TY ++ + + +++ + V M +GI D V YT+++ G+V
Sbjct: 317 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 376
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++EM+ ++ P ++YTA + L RV EA ++ EM+ + L P+ TYT L++
Sbjct: 377 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 436
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ GK +EA + ++M + G+ P+ L + CK GE T +L M L L
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + A D + + F DAV + T L+
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF--HPDAVTYTT------------LMDA 542
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K + +V LL ++D+ +Q + ++ C + ++ ++ +
Sbjct: 543 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 602
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
T Y +LI N EI M G
Sbjct: 603 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKG----------------------------- 633
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
++P+ TY LI + A + +A +++ M KG + ++ ++N L+ G K +
Sbjct: 634 VVPDGN----TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 689
Query: 480 SDA-EIYRKEKK 490
+A E++ + ++
Sbjct: 690 LEARELFEQMRR 701
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 166/426 (38%), Gaps = 53/426 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +Y+T+++ + + + + + E MQ KG+ + TY V+ L G V
Sbjct: 282 RGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAE 341
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + EM + P V YT + V A ++ EM +R + P+ TYT ++
Sbjct: 342 AERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVIC 401
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
L + G+ EA ++F +M ++PD+ LI+ CK G+ + + M + L
Sbjct: 402 GLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTP 461
Query: 239 --LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y + L D + LL E +E + L
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLH-----------------EMCRKGLELNIYTYNSL 504
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
V L K N+ L+ + D+ +T+++ C R + A E +M
Sbjct: 505 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE---MVRAHELLRQM-- 559
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
L+R ++ + +N F + M + G L ++ + +P A
Sbjct: 560 -LDRELQPTVVTFNVLMNGF-----CMSGMLEDGEKLLKWM---------LEKGIMPNA- 603
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
TY +LI Y + +IY+ MC KG+ P T+N+L+ G K
Sbjct: 604 ------------TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKA 651
Query: 477 GRVSDA 482
+ +A
Sbjct: 652 RNMKEA 657
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 132/357 (36%), Gaps = 58/357 (16%)
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
D +K A V+ E + G+ N +Y ++ L + G+ EA ++ +M+ G PD +
Sbjct: 232 DGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISY 291
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL----QTFKVADENDSLLWQVH 265
+ +I C+ GE + ++ ++ M+ L + + +T KVA+ L +
Sbjct: 292 STVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMIS 351
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
+P+ + TT I+G K N+ + L + + I D
Sbjct: 352 EGIAPDGV-------IYTTLIDG-----------FCKLGNVSSAYRLFDEMQKRKISPDF 393
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ +I C R A F V L + Y ALI K + + +
Sbjct: 394 ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQ 453
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
M + G L P TYTAL G D
Sbjct: 454 MLQMG-----------------------------LTPN----IVTYTALADGLCKCGEVD 480
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
A ++ MCRKG+ ++ T+N L+ GL K G + A K K ++ DAV
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAV---KLMKDMEVAGFHPDAV 534
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 68/145 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++ F + + + + + M EKGI +A TY S++ ++ I+ M
Sbjct: 570 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P +Y +K +KEA ++++M+ +G +Y L++ + K+
Sbjct: 630 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 689
Query: 188 EEALEIFSKMQEAGVQPDKAACNIL 212
EA E+F +M+ G+ D+ NI
Sbjct: 690 LEARELFEQMRREGLVADREIYNIF 714
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY +++ + + + ++ M KG+ D TY ++ A ++
Sbjct: 597 KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE 656
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M K T+ SY A +K + + EA +++++M + GL + Y + +
Sbjct: 657 AWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFAD 716
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
GK E LE+ C+ IEKC
Sbjct: 717 INYDEGKMELTLEL---------------CDEAIEKC 738
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 190/452 (42%), Gaps = 24/452 (5%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ Q L ME+A FF+ D +YTT++ ++KRI +FE ++
Sbjct: 339 TIIQGLYDAQRMEEAKAFFDEA-------LDVISYTTVIKGLADSKRIDEACELFEKLKT 391
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G + + V YT+V+ L AG ++ + +E+M C PT +YT + L + +
Sbjct: 392 AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPD 451
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A V+++M+Q+G P+ TYT L++ +A K +EA ++ M G +P ++
Sbjct: 452 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVH 511
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
CK ++ M+E +F +L ++ ++ +QV + + +
Sbjct: 512 GFCKLDMINEAKEVIAQMRERGCEPGLFIFT-SLLSYYLSKGRAEEAYQVLTEMTARGCA 570
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
D + + + L+ +L + + +++K D+ TII+
Sbjct: 571 -PDVILYTS------------LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 617
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
+ A E K + + AY +L+ +KL + + + M +G
Sbjct: 618 FSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 677
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIY 451
+L+H L + A +F + E + T YT LI AG +A +
Sbjct: 678 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQF 737
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ M +GI P T+ L+ L K GR+ +A+
Sbjct: 738 QEMIDRGIIPECHTYTSLIYSLAKAGRIPEAK 769
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 196/471 (41%), Gaps = 29/471 (6%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
TV L + M++A+ FFN + G D +TT++ F +A + + ++
Sbjct: 60 TVISGLASIDKMDEAYKFFNSMI-DNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQAL 117
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
K D YTSV+H AGD+D I EEM C P +Y + L RV E
Sbjct: 118 KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A ++++ M + G + T+ L+E L GK +EA E++ +M E G +P + LI
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSP 270
CKAG+ I + + ++A + + + +V D LL V P
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILL-----KKKNLVAIDSLLSGIMDKSIQ--- 322
+ + N + +D L L L K N +++ G+ D
Sbjct: 298 DIQTYN----ILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA 353
Query: 323 -------LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
LD +T+I+ D +R D A FE + AY A+I L+K
Sbjct: 354 KAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYT 432
+ E+M+ + ++I L A+ A K+F + + + C T TYT
Sbjct: 414 IEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQ-KGCVPDTITYT 472
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI + A D+A K+ M KG P+ T+ ++ G KL +++A+
Sbjct: 473 TLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 169/438 (38%), Gaps = 66/438 (15%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TYTT++D F +A ++ + + ++M KG AVTY S++H ++
Sbjct: 462 KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINE 521
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M+ + C P + +T+ + R +EA V EM RG P+ YT L++
Sbjct: 522 AKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLID 581
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE----- 234
L G+ EA +F M E G PD +I+ K G IL M +
Sbjct: 582 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP 641
Query: 235 -----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
N L Y + Q F V D V P ++ N + + D +
Sbjct: 642 DCFAYNSLMDGYVKLERVDQAFGVYDR------MVASGIKPNAVTFNVLMHGLFKDGK-- 693
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
D+ L K ++ D + ++ +I +D + R A F+
Sbjct: 694 --TDRAFSLF----KEMLEKDEVPPTLVSYTILIDGLGKAG---------RVSEAFSQFQ 738
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ + E Y +LI L K P+ ++VE+M K G +
Sbjct: 739 EMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN----------------- 781
Query: 410 RPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
P+ Q Y+ALI + D A +++ M ++G P+ T+ VL
Sbjct: 782 ------------PDVQ----AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825
Query: 470 LAGLEKLGRVSDAEIYRK 487
G GR D E ++
Sbjct: 826 RRGFRAAGRALDLEAVKQ 843
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 2/169 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A +++S G D F Y +++D + + +R+ V++ M GI +AVT+
Sbjct: 624 VEAAGEILELMAKS-GVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFN 682
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+MH L G D A ++++EM K E PT+VSYT + L RV EA ++EMI
Sbjct: 683 VLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMID 742
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
RG+ P C+TYT L+ L +AG+ EA ++ M + GV PD A + LI
Sbjct: 743 RGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 791
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 186/461 (40%), Gaps = 67/461 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F +S S G + TYTT++ +A+R+ K F+ +D ++YT
Sbjct: 315 LDDALELFKLLS-SYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA------LDVISYT 367
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+V+ L+++ +D A ++E++K C P +V+YTA + L R+++ +++M
Sbjct: 368 TVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGS 427
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KCCKAGET 222
P TYTV+++ L +A +A ++F +M + G PD LI+ K K E
Sbjct: 428 SCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEA 487
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
R ++ ++ A+ Y + +E ++ Q+ +
Sbjct: 488 RKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER--------------- 532
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
E L I L+ L K +L+ + + D + +++I++ R
Sbjct: 533 --GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 590
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A F+ ++ + Y +I K+ EI+E M K+G
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG------------ 638
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
+ P+ C A Y +L+ Y D+A +Y M GI P+
Sbjct: 639 -----------------VGPD---CFA-YNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 677
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
TFNVL+ GL K G+ A KE L KD VP
Sbjct: 678 AVTFNVLMHGLFKDGKTDRAFSLFKE-------MLEKDEVP 711
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 155/428 (36%), Gaps = 58/428 (13%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M G+ D V V++ L A +D A+ ++ EM C PTIVSY + L D+
Sbjct: 11 MHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDK 70
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK------------------------- 186
+ EA + MI G P+ +T L+ +AG+
Sbjct: 71 MDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSV 130
Query: 187 ---------YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ +I +M AG PD AA +LI+ CK G + M+++
Sbjct: 131 IHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGC 190
Query: 238 ALRYPVFK---EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
Y F EAL DE L E + E L +
Sbjct: 191 LGDYVTFMTLIEALSNHGKLDEACELYR-----------------EMIERGYEPYLEVQD 233
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ L K + + + ++ K + +++++ C R D L V+
Sbjct: 234 SLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVEC 293
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
D + Y L+ + N E+ + ++ G +I L A+R A
Sbjct: 294 DNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEA 353
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
F ++ +YT +I + D+A ++++ + G P++ + ++ GL
Sbjct: 354 KAFF----DEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLL 409
Query: 475 KLGRVSDA 482
K GR+ D
Sbjct: 410 KAGRIEDG 417
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 141/370 (38%), Gaps = 53/370 (14%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++ +EM P +V+ + L ++ +A +++ EM G P +Y ++
Sbjct: 4 ALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVIS 63
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L K +EA + F+ M + G +PD A LI CKAG+ +
Sbjct: 64 GLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV--------------- 108
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
LL Q +F P+ V T+ I G
Sbjct: 109 -----------------GHMLLNQALKRFRPD-------VFLYTSVIHG----------- 133
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K +L +L ++ D+A +I+ C R D A FE K +
Sbjct: 134 YCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
++ LI L + E+ EM + G+ + + LI L A + A +I+
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ 253
Query: 420 LLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ + T+ Y +L+ Y G D LK+ M P + T+N+L+AG +
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRAN 313
Query: 478 RVSDA-EIYR 486
R+ DA E+++
Sbjct: 314 RLDDALELFK 323
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 101/178 (56%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N D FT++ ++D F + ++ + +++ M ++ I+ VTY+S+++ +D
Sbjct: 934 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E M K C+P +V+Y +K RV+E +V++EM QRGL N TY +L++
Sbjct: 994 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L +AG + A EIF +M GV P+ N L++ CK G+ +++ Y++ +++
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 192/460 (41%), Gaps = 24/460 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F + +SR F ++ +L + + + + E MQ GI + TY+
Sbjct: 676 LDDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ + A+ + +M P IV+ ++ + + R+ EA + +M
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN T+ L+ L K EA+ + +M G QPD +++ CK G+T
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISD------ 275
+L M++ +L L Y + L +K D+ +L ++ + P ++
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 276 -------NDAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+DA ++ IE ++ D L+ +K+ LV + L ++ +SI
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S++I C H R D A FE+ V + Y LI K + E+
Sbjct: 975 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAG 442
EM++ G +LI L A A +IF + D TY L+ G
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+KA+ +++ + R + P++ T+N+++ G+ K G+V D
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 1134
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 204/491 (41%), Gaps = 70/491 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ +LD F + ++ K +FE M I+ D VTY+S+++ L +D A +++ M
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 424
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C +VSY + RV++ +++EM QRGL N TY L++ +AG
Sbjct: 425 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 484
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY----PV 243
++A E FS+M G+ PD NIL+ C GE ++I M++ + L V
Sbjct: 485 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 544
Query: 244 FKEALQTFKVADENDSLLWQVHPQFS-----PEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ +T KV + W + S P+ ++ + + T +G L + L
Sbjct: 545 IRGMCKTGKVEEA-----WSLFCSLSLKGLKPDIVTYTTMMSGLCT--KGLLHEVEAL-Y 596
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN-------------CDHR----RR 341
+K++ L+ D LS D I L + +I ++ C R
Sbjct: 597 TKMKQEGLMKNDCTLS---DGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRA 653
Query: 342 DGALLAFEYSVKMDLN----LERTAYLALIGILIKLNTFPKVAE---------------- 381
+++Y K+ N L+ +AL G ++K FP + E
Sbjct: 654 FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV 713
Query: 382 ---IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA-----KIFSLLPEDQKCTATYTA 433
+ E+M G Y ++LI+ R +P A K+ L E T ++
Sbjct: 714 VISLGEQMQNLGIPHNHYTYSILINCF-CRRSQLPLALAVLGKMMKLGYEPN--IVTLSS 770
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKS 491
L+ Y + +A+ + M G P+ TFN L+ GL + S+A I R K
Sbjct: 771 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 830
Query: 492 IQADALSKDAV 502
Q D ++ V
Sbjct: 831 CQPDLVTYGVV 841
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 1/193 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F ++ F D TY T++ F + KR+ VF M ++G+ + V
Sbjct: 988 HDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 1046
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY ++ L AGD D A I++EM P I++Y + L N ++++A V++ +
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ + P YTY +++E + +AGK E+ ++F + GV+PD A N +I C+ G
Sbjct: 1107 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 1166
Query: 223 RTIILILRYMKEN 235
+ + MKE+
Sbjct: 1167 EEADALFKEMKED 1179
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I D +T ++ +K +E L+ V RS +
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS--ID 972
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
TY+++++ F R+ K +FE M K D VTY +++ V+ + +
Sbjct: 973 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+Y ++ LF A +++KEM+ G+PPN TY L++ L +
Sbjct: 1033 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+A+ +F +Q + ++P NI+IE CKAG+
Sbjct: 1093 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 1130
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 187/447 (41%), Gaps = 20/447 (4%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F+ + S+G D +Y T+++ F +AKR+ +F M ++G+ + V
Sbjct: 411 HDRIDEANQMFDLMV-SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 469
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +++ AGDVD A + +M P I +Y + L N +++A ++++M
Sbjct: 470 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 529
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+R + + TYT ++ + + GK EEA +F + G++PD ++ C G
Sbjct: 530 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 589
Query: 223 RTIILILRYMKENRLALR--------YPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
+ + MK+ L + E ++ SLL + + +S
Sbjct: 590 HEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALS 649
Query: 275 DNDAVEFVTT-DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV-ISTII 332
A T+ D LS + L LK + VA L G M KS S + S ++
Sbjct: 650 LLRAFSGKTSYDYREKLSRNG---LSELKLDDAVA----LFGEMVKSRPFPSIIEFSKLL 702
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ D + E + + Y LI + + P ++ +M K G+
Sbjct: 703 SAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE 762
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+ + L++ ++R A + + Q T T+ LI F A +A+ +
Sbjct: 763 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 822
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLG 477
M KG P L T+ V++ GL K G
Sbjct: 823 IDRMVAKGCQPDLVTYGVVVNGLCKRG 849
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ KY S ++ L I+ D YT N V+ + L + + + G+
Sbjct: 195 LSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGY 254
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
DR T ++++ F R+S + + M E G D V Y +++ L V+ A +
Sbjct: 255 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 314
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++E++ K P +V+YTA + L + R +A + +MI++ + PN TY+ L++ V
Sbjct: 315 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 374
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ GK EA E+F +M + PD + LI C
Sbjct: 375 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 409
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D Y ++D + KR++ F+ ++ KGI + VTYT++++ L N+ A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M K+ P +++Y+A + N +V EA ++++EM++ + P+ TY+ L+
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + +EA ++F M G D + N LI CKA + + R M + L
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467
Query: 241 YPVFKEALQTFKVADEND 258
+ +Q F A + D
Sbjct: 468 TVTYNTLIQGFFQAGDVD 485
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 169/433 (39%), Gaps = 52/433 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +D +T+ +++ F ++S + M + G D VT S+++ V A
Sbjct: 218 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 277
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V++ ++M P IV+Y A + L RV +A D +KE+ ++G+ PN TYT L+
Sbjct: 278 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 337
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + ++ +A + S M + + P+ + L++ K G
Sbjct: 338 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG-------------------- 377
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
KV + + V P+ ++ + S+ GL L
Sbjct: 378 -----------KVLEAKELFEEMVRMSIDPDIVTYS--------------SLINGLCL-- 410
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+ + + ++ K D +T+I C +R + + F + L
Sbjct: 411 --HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI + K E +M G S ++ +L+ L A IF
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528
Query: 421 LPEDQK--CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ + + TYT +I G ++A ++ ++ KG+ P + T+ +++GL G
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588
Query: 479 VSDAE-IYRKEKK 490
+ + E +Y K K+
Sbjct: 589 LHEVEALYTKMKQ 601
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 143/372 (38%), Gaps = 24/372 (6%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ A++++ +M +P+IV + + + + + K+M G+ + YT+ +
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE-- 234
++ + AL I KM + G +PD+ L+ C+ + ++ M E
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288
Query: 235 --NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ + +T +V D D P ++
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT---------------- 332
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
LV L LLS ++ K I + S +++ + + A FE V
Sbjct: 333 --ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 390
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+M ++ + Y +LI L + + ++ + M G V LI+ A+R
Sbjct: 391 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 450
Query: 413 PAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
K+F + + T TY LI +F AG DKA + + M GI P + T+N+LL
Sbjct: 451 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 510
Query: 471 AGLEKLGRVSDA 482
GL G + A
Sbjct: 511 GGLCDNGELEKA 522
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TY T+LD + ++ VFE +Q + TY ++ + AG V+
Sbjct: 1073 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 1132
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +V+Y + +EA ++KEM + G PN Y L+
Sbjct: 1133 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 1192
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G E + E+ +M+ G AG+ TI L+ + + RL
Sbjct: 1193 RARLRDGDREASAELIKEMRSCGF----------------AGDASTIGLVTNMLHDGRL 1235
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 186/427 (43%), Gaps = 28/427 (6%)
Query: 65 DRFTYTTMLDIFGEAKR--ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D FTYT+M I G ++ + S VF M ++G + VTY+++++ L ++G V+ A +
Sbjct: 249 DTFTYTSM--ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDR--VKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM L PT ++T I+ L D ++A ++ +M +G PN YTYT L+
Sbjct: 307 LIREMILHGILPT--AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 364
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +G + A+ +F +M GV P+ N LI + + ++L M N +
Sbjct: 365 LCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPN 424
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT--TDIEGPLSIDQGLVL 298
+ E ++ + + + + ++ + + VT T I+G D G
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMN-----NMLQRGHSANLVTYNTIIKG--YCDSG--- 474
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
N + +L + D + D + +I C + + A F V L
Sbjct: 475 ------NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP 528
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y ALI K ++E M ++G V +LIH L A ++
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588
Query: 419 SLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
++ E+ TYTA+I GS AL+++ M +G P+L T++ L+ L +
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648
Query: 477 GRVSDAE 483
G+V +AE
Sbjct: 649 GKVEEAE 655
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 167/366 (45%), Gaps = 14/366 (3%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+++ K D ++ +++ ME A+ FN + G + TYT ++D + +
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD-GLCPNEVTYTALIDGYCK 542
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+++ + + E M+ G + TY ++H L+ + GA + + M + +P +V+
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YTA + L N A +++ +MI++G PN TY+ L+ L + GK EEA +F++++
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQT-FKVA 254
G+ PD+ +IE +G+ L M + Y V + L+ + +A
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 722
Query: 255 DENDSLLWQVHPQFSPEF-ISDNDAVEFVT---TDIEGPLS--IDQGLVLILLKKKNLVA 308
D+ + L V P S + +D DAV ++ +++ LS + LV L
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 782
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ LL ++ + + D ++++ R D A+ F++ + Y LI
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842
Query: 369 ILIKLN 374
L +L+
Sbjct: 843 ALCQLH 848
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 4/203 (1%)
Query: 35 TVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N+++K + + +KA L N + + RG + + TY T++ + ++ +S + +L
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQ-RGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M++ G D +YT ++ ++ A ++ EM P V+YTA + +++
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ AT + + M + G PN TY VL+ L + + A E+ M E G+ P+
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 212 LIEKCCKAGETRTIILILRYMKE 234
+I+ CK G T + + M E
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIE 628
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/391 (19%), Positives = 159/391 (40%), Gaps = 20/391 (5%)
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+++ + G+ + Y++++ LS G ++ + M + P ++ Y A + L
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ V +A + K++ + + P+ +TYT ++ R + AL++F++M + G +P+
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 209 CNILIEKCCKAGETRTIILILRYM-KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+ LI C +G ++R M L + + + D+ W++
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA--WRLFVD 345
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+ N V T I G L + GL+ + + + ++ D G+ ++ + A+
Sbjct: 346 MKNKGCEPN--VYTYTALISG-LCV-SGLLKVAIGLFHRMSRD----GVFPNTVTYN-AL 396
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
I+ ++E +RR A + + + Y +I L K ++ M
Sbjct: 397 INILVE----NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSA 444
+ GHS + +I + A +I L+ D C +YT LI +
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKM 511
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ A ++ M G+ P+ T+ L+ G K
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCK 542
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +G+ D Y S++ L +VD A+ +++ M + C + Y + L R
Sbjct: 790 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 849
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
KEA ++ M+ R P+ VL++ L+R G + +E M+ P
Sbjct: 850 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 93/173 (53%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG N + TY TML F A +I F M+++ ID VTYT+V+H AG++
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N+++EM + P++ +Y A +++L D V+ A +++EM++RG PN TY VL+
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L AG++ E+ +M+ G +P+ N++I + E + + M
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ AW FF + R D TYTT++ FG A I + VF+ M +G+ TY
Sbjct: 246 IRHAWEFF-LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L +V+ AV ++EEM + P + +Y ++ LF ++ + M
Sbjct: 305 AMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE 364
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G PN TY +++ Y + E+AL +F KM P+ NILI
Sbjct: 365 GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/471 (20%), Positives = 173/471 (36%), Gaps = 89/471 (18%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWV-SRSRGFNHDRFTYT 70
+T Q LL W VN VLK H P KA FF+++ + R + HD ++
Sbjct: 38 TTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGP--KALQFFHFLDNHHREYVHDASSFD 95
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+DI ++ + M+ I T+ V ++AG D AV ++ M
Sbjct: 96 LAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEH 155
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C+ + S+ + +L + RV++A ++++ + R + TY V++ + +A
Sbjct: 156 GCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKA 214
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
LE+ +M E G+ P+ N +++ +AG+ R MK+ + + +
Sbjct: 215 LEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHG 274
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
F VA E +K+ V +
Sbjct: 275 FGVAGE--------------------------------------------IKRARNVFDE 290
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+ G++ A + +I+V C + A++ FE V+ T Y LI L
Sbjct: 291 MIREGVLP-----SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
F + E+++ M G P Q T
Sbjct: 346 FHAGEFSRGEELMQRMENEGCE-----------------------------PNFQ----T 372
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
Y +I Y +KAL +++ M P+L T+N+L++G+ R D
Sbjct: 373 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
QVL +E A + F + R RG+ + TY ++ A S + + + M+ +G
Sbjct: 308 QVLCKKDNVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE--- 154
+ TY ++ + S +V+ A+ ++E+M +C P + +Y + +F+ R ++
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVV 426
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
A + EM++RG P +T+ ++ L+ G A EI ++G
Sbjct: 427 AGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 3/187 (1%)
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+L K K + L + + +D+ + I+ C +R AL + V+ +N
Sbjct: 170 VLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINP 228
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
T Y ++ + E EM K + V ++H G A A +F
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 419 SLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ + ATY A+I V + + A+ +++ M R+G P++ T+NVL+ GL
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 477 GRVSDAE 483
G S E
Sbjct: 349 GEFSRGE 355
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 22/192 (11%)
Query: 314 SGIMDKSIQL-----------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+G DK+++L D A +TI++V C +R + A F +++ +++
Sbjct: 139 AGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-ALRGRFSVDTVT 197
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAG--HSLGVYLGALL-IHRLGSARRPVPAAKIFS 419
Y ++ + PK E+++EM + G +L Y L R G R A F
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH----AWEFF 253
Query: 420 LLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
L + + C TYT ++ + AG +A ++ M R+G+ PS+ T+N ++ L K
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 477 GRVSDAEIYRKE 488
V +A + +E
Sbjct: 314 DNVENAVVMFEE 325
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LIHR+ S R P+ K F+++ E Y SAG DKA+K++ M G
Sbjct: 113 LIHRMRSLRIG-PSPKTFAIVAER-------------YASAGKPDKAVKLFLNMHEHGCF 158
Query: 461 PSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
L +FN +L L K RV A E++R + D ++ + +
Sbjct: 159 QDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVI 201
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYR 486
T TY ++ + KAL++ K M +GI+P+L T+N +L G + G++ A E +
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254
Query: 487 KEKK 490
+ KK
Sbjct: 255 EMKK 258
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 226/530 (42%), Gaps = 79/530 (14%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVL--------KTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
D+A LL + K +S+T + VL ++ AW FF+ + +++G D TY
Sbjct: 255 DAALSLLDEM--KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEM-KAQGLVPDDVTY 311
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
TT++ + +A+R+ +FE + Y +++ +AG D A ++ E K
Sbjct: 312 TTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR 371
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K C P++++Y + L +V+EA ++ EM Q PN TY +L++ L +AG+ E
Sbjct: 372 KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEA 430
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAG-------------------ETRTII-LIL 229
AL++ M+EAG+ P+ NI+I++ CKA ++RT LI
Sbjct: 431 ALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLID 490
Query: 230 RYMKENRLALRYPVFKEALQT----------------FKVADENDS---LLWQVHPQFSP 270
+ R+ Y ++++ L + FK + D VH SP
Sbjct: 491 GLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP 550
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ + N ++ V E +++G L + L+ + SI + V +
Sbjct: 551 DLMLLNSYMDCVFKAGE----VEKGRALF-----EEIKAQGLVPDVRSYSILIHGLVKAG 601
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
R+ L +E + L+L+ AY +I K K +++EEM G
Sbjct: 602 F--------SRETYKLFYEMK-EQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG 652
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT------YTALIGVYFSAGSA 444
V ++ L R A +F E+ K Y++LI + G
Sbjct: 653 LQPTVVTYGSVVDGLAKIDRLDEAYMLF----EEAKSIGVDLNVVIYSSLIDGFGKVGRI 708
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
D+A I + + +KG+ P+ T+N LL L K + +A++ + K+++
Sbjct: 709 DEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKC 758
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 187/446 (41%), Gaps = 64/446 (14%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
LK M++A LF N + T M+D +A+++ +F + K +
Sbjct: 432 LKVQDTMKEAGLFPNIM-----------TVNIMIDRLCKAQKLDEACSIFLGLDHKVCSP 480
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D+ T+ S++ L G VD A +++E+M + P +V YT+ ++ F R ++ +Y
Sbjct: 481 DSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIY 540
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
KEM+ RG P+ M+ + +AG+ E+ +F +++ G+ PD + +ILI KA
Sbjct: 541 KEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKA 600
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G +R + MKE L L + + F + + D +Q+ +
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDK-AYQLLEE------------ 647
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+K K L ++D ++D
Sbjct: 648 ---------------------MKTKGLQPTVVTYGSVVDGLAKID--------------- 671
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R D A + FE + + ++L Y +LI K+ + I+EE+ + G + Y
Sbjct: 672 RLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWN 731
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCR 456
L+ L A A F + ++ KC+ TY+ +I +KA ++ M +
Sbjct: 732 CLLDALVKAEEIDEAQVCFQNM-KNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQK 790
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
+G+ P+ T+ ++AGL K G V +A
Sbjct: 791 QGLKPNNITYTTMIAGLAKAGNVMEA 816
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 193/478 (40%), Gaps = 64/478 (13%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ + +TT++ +F RI + + + M+ D V Y + G VD A
Sbjct: 233 GYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMA 292
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EMK + P V+YT + +L R+ EA ++++E+ P Y Y ++
Sbjct: 293 WKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMG 352
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAA--C----------------------------- 209
AGK++EA + + + G P A C
Sbjct: 353 YGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNL 412
Query: 210 ---NILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ 263
NILI+ CKAGE + + MKE L + + + L + DE S+
Sbjct: 413 TTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLG 472
Query: 264 V-HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ H SP D+ F + I+G L ++ + SL ++D S Q
Sbjct: 473 LDHKVCSP------DSRTFCSL-IDG-----------LGRRGRVDDAYSLYEKMLD-SDQ 513
Query: 323 LDSAVISTIIEVN---CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ + V+ T + N C R+ DG + ++ V + + + + + K K
Sbjct: 514 IPNVVVYTSLIQNFFKCG-RKEDGHKI-YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKG 571
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGV 437
+ EE+ G V ++LIH L A K+F + E Y +I
Sbjct: 572 RALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDG 631
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
+ +G DKA ++ + M KG+ P++ T+ ++ GL K+ R+ +A + +E KSI D
Sbjct: 632 FCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD 689
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 106/533 (19%), Positives = 196/533 (36%), Gaps = 46/533 (8%)
Query: 1 MRDTISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS 59
MR T+ ++ +L+ W ++ L + V+K + A+ +F WV R
Sbjct: 67 MRKTVYDLCGVLENGLWGPDVEEALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRWVERK 126
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
H Y L + + + ++ + E M G + ++ + +
Sbjct: 127 TQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKE 186
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + E M+ + P +YT + L +R ++ +M + G N + +T L+
Sbjct: 187 AFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVR 246
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
R G+ + AL + +M+ D N+ I+ K G+ MK L
Sbjct: 247 VFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVP 306
Query: 239 --LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y L + DE L ++ S + A + D+
Sbjct: 307 DDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVY---AYNTMIMGYGSAGKFDEAY 363
Query: 297 VLILLKKK-----NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
L+ +K+ +++A + +L+ + K ++ I D R+D A Y+
Sbjct: 364 SLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIH-------DEMRQDAAPNLTTYN 416
Query: 352 VKMDLNL---ERTAYLALIGILIKLNTFPKVAEI---VEEMTKA---GHSLGVYLG---- 398
+ +D+ E A L + + + FP + + ++ + KA + ++LG
Sbjct: 417 ILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHK 476
Query: 399 ---------ALLIHRLGSARRPVPAAKIFS-LLPEDQ-KCTATYTALIGVYFSAGSADKA 447
LI LG R A ++ +L DQ YT+LI +F G +
Sbjct: 477 VCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG 536
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKD 500
KIYK M +G P L N + + K G V +E I+A L D
Sbjct: 537 HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEE---IKAQGLVPD 586
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G + +T+ +LD +A+ I + F+ M+ + +A+TY+ +++ L +
Sbjct: 720 QKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFN 779
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A W+EM+ + P ++YT + L V EA ++ G P+ Y ++
Sbjct: 780 KAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMI 839
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG--ETRTII-LILRYMKEN 235
E L A K +A +F + + G + + C +L++ KA E I+ +LR M ++
Sbjct: 840 EGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAKS 899
Query: 236 RLALRYP 242
+ A R P
Sbjct: 900 QHATRLP 906
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA++F+ + + +G + TYTTM+ +A + + +F+ + G D+ Y ++
Sbjct: 780 KAFVFWQEMQK-QGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAM 838
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKEC 132
+ LS+A A ++EE +LK C
Sbjct: 839 IEGLSSANKAMDAYIVFEETRLKGC 863
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 101/187 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ GF D +YT++++ + K + V M+EKG + VTYT VMH L ++
Sbjct: 284 KEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEI 343
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ ++E+MK C P Y++ + IL R+K+A DV+++M ++G P+ TY +
Sbjct: 344 SKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTM 403
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + E+AL++ KM+E+ +PD + L++ CC+ + + +L +M +N +
Sbjct: 404 ISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDI 463
Query: 238 ALRYPVF 244
+L +
Sbjct: 464 SLEVGTY 470
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 170/440 (38%), Gaps = 39/440 (8%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWL----FFNWVSR 58
D IS + K ++S+ D+ L + V QVLK W+ FF W
Sbjct: 90 DKISELLK-FRHSSADAVVQALGGCGVSVSESLVEQVLKR---FSNDWIPAFGFFKWAKA 145
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G+ H +Y +M+DI G+ K+ M + E M G + T T VM L+ A
Sbjct: 146 QTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWK 205
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + M+ ++ M L + V+ A DV+ E + + N +T+ VL+
Sbjct: 206 DAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVE-FKDSILLNPHTFNVLI 264
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+A K + AL+ ++M+E G PD + ++E C+ + R + +L M+E
Sbjct: 265 HGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCP 324
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ + E L + D S L+
Sbjct: 325 PNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDT--------------SFYSSLIY 370
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF----EYSVKM 354
IL K L + + + D +T+I C H + + AL E S K
Sbjct: 371 ILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKP 430
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
DLN Y L+ + + N ++ ++ M K SL V +LL+H L + + A
Sbjct: 431 DLN----TYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHA 486
Query: 415 AKIF------SLLPEDQKCT 428
F L+P+D CT
Sbjct: 487 CLFFEEMVSKGLVPKD--CT 504
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R A+ AF + + + A L+ L+K N+ ++ E K L +
Sbjct: 203 RWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEF-KDSILLNPHTFN 261
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRK 457
+LIH AR+ A K + + E C +YT+++ Y K + M K
Sbjct: 262 VLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEK 321
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
G P++ T+ +++ L K +S A E+Y K K S
Sbjct: 322 GCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGS 356
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 180/415 (43%), Gaps = 16/415 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D T+ +++ +I +F M ++G + ++YT+V++ L G+ A
Sbjct: 158 GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMA 217
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V+++++M+ C P +V+Y+ + L + V +A + EM++RG+PPN +TY ++
Sbjct: 218 VDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHG 277
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
G+ EA +F +M V P+ IL++ CK G L+ M E +
Sbjct: 278 FCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPD 337
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + + + L+ + F I A + +I L+
Sbjct: 338 ISTYNALMDGYCL----QRLMNEAKKVFEI-MIRKGCAPGAHSYNI---------LINGY 383
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K + + SLL+ + K++ D+ ST+++ C R AL F+ +
Sbjct: 384 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNL 443
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y+ L+ K + ++++ M + + +LI + A + A ++FS
Sbjct: 444 VTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSK 503
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
L D + TYT +I G +D+A +++ M G P+ ++NV++ G
Sbjct: 504 LFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 177/430 (41%), Gaps = 58/430 (13%)
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
H+ ++ +++ + V M + GI+ DA+T+ ++++ L N G + AV +
Sbjct: 126 HNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVEL 185
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + P ++SYT + L A DV+K+M Q G PN TY+ +++ L +
Sbjct: 186 FNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK 245
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
+A+E S+M E G+ P+ N ++ C G+
Sbjct: 246 DRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQ---------------------- 283
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
EA + FK E V D+ P ++ +++ L K
Sbjct: 284 LNEATRLFK---------------------------EMVGRDVM-PNTVTFTILVDGLCK 315
Query: 304 KNLVAIDSLLSGIM-DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+ +V+ L+ M +K ++ D + + +++ C R + A FE ++ +
Sbjct: 316 EGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHS 375
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF---- 418
Y LI K + ++ EM + + L+ L RP A +F
Sbjct: 376 YNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMC 435
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
S P TY L+ + G D+ALK+ K+M K + P++ + +L+ G+ G+
Sbjct: 436 SYGPHPN--LVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493
Query: 479 VSDA-EIYRK 487
+ A E++ K
Sbjct: 494 LEVAKELFSK 503
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 178/427 (41%), Gaps = 73/427 (17%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ L F + K+ S++ + M + + + +++ L VD +V++ +M
Sbjct: 96 FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMF 155
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+P +++ A + L ++KEA +++ EM++RG PN +YT ++ L + G
Sbjct: 156 KLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTS 215
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A+++F KM++ G +P+ + +I+ CK +RL
Sbjct: 216 MAVDVFKKMEQNGCKPNVVTYSTIIDSLCK----------------DRLV---------- 249
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID----QGLVLILLKKK 304
NDA+EF++ +E + + +V
Sbjct: 250 ---------------------------NDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLG 282
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
L L ++ + + ++ + +++ C A L FE + + + + Y
Sbjct: 283 QLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYN 342
Query: 365 ALI-GILIK--LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF--- 418
AL+ G ++ +N KV EI M + G + G + +LI+ +RR A +
Sbjct: 343 ALMDGYCLQRLMNEAKKVFEI---MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEM 399
Query: 419 ---SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+L P+ T TY+ L+ G +AL ++K MC G HP+L T+ +LL G K
Sbjct: 400 YHKALNPD----TVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCK 455
Query: 476 LGRVSDA 482
G + +A
Sbjct: 456 HGHLDEA 462
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 100/189 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ N D TY+T++ + R +F+ M G + + VTY ++ G +D
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + + MK K+ P IV YT ++ +F+ +++ A +++ ++ G P+ TYTV+++
Sbjct: 462 ALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIK 521
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L++ G +EA ++F KM++ G P+ + N++I+ + ++ T I ++ M R ++
Sbjct: 522 GLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSV 581
Query: 240 RYPVFKEAL 248
F+ L
Sbjct: 582 NLSTFQMLL 590
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A L F ++ +G D TY ++D + + ++ K VFE+M KG A +Y
Sbjct: 319 VSEARLVFETMTE-KGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYN 377
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ + +D A ++ EM K P V+Y+ M+ L R KEA +++KEM
Sbjct: 378 ILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSY 437
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
G PN TY +L++ + G +EAL++ M+E ++P+ ILIE AG+
Sbjct: 438 GPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + FTY +++ F +++ +F+ M + + + VT+T ++ L G V
Sbjct: 262 RGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSE 321
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E M K P I +Y A M L + EA V++ MI++G P ++Y +L+
Sbjct: 322 ARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILIN 381
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
++ + +EA + ++M + PD + L++ C+ G + + + + M
Sbjct: 382 GYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + + TY +LD F + + + + M+EK + + V YT ++ + AG ++
Sbjct: 436 SYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLE 495
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ ++ P I +YT +K L EA D++++M G PN +Y V++
Sbjct: 496 VAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMI 555
Query: 179 EYLVRAGKYEEALEIFSKM 197
+ ++ A+ + +M
Sbjct: 556 QGFLQNQDSSTAIRLIDEM 574
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
S+L + I D+ + +I C+ + A+ F VK +Y +I L
Sbjct: 149 SVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGL 208
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCT 428
K ++ ++M + G V + +I L R A + S + E
Sbjct: 209 CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV 268
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK- 487
TY +++ + + G ++A +++K M + + P+ TF +L+ GL K G VS+A + +
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328
Query: 488 -EKKSIQADALSKDAV 502
+K ++ D + +A+
Sbjct: 329 MTEKGVEPDISTYNAL 344
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 175/428 (40%), Gaps = 24/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + FTY ++ + + + +FE M+ KG+ D VTY S++ G + GA
Sbjct: 246 GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGA 305
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V+++EEMK C P +++Y + + +R+ +A + M QRGL PN TY+ L++
Sbjct: 306 VSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDA 365
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AG EA + F M G+QP++ LI+ CK G+ + M++ + L
Sbjct: 366 FCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLN 425
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ L E+ + +A E ++ +++Q + L
Sbjct: 426 IVTYTALLDGLC---EDGRM---------------REAEELFGALLKAGWTLNQQIYTSL 467
Query: 301 ----LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+K K + +L + K+++ D + T I C + ++ + L
Sbjct: 468 FHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGL 527
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y LI K+ + +++EM G + V +LI L A +
Sbjct: 528 TANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVR 587
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
F + + Q YTALI ++A ++ M KGI P + L+ G
Sbjct: 588 YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNM 647
Query: 475 KLGRVSDA 482
K G +A
Sbjct: 648 KHGNPGEA 655
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 164/424 (38%), Gaps = 93/424 (21%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N+ K M++A G N + TYT +LD E R+ + +F + +
Sbjct: 407 LNEAFKLESEMQQA-----------GVNLNIVTYTALLDGLCEDGRMREAEELFGALLKA 455
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G ++ YTS+ H A ++ A++I EEM K P ++ Y + L + ++++
Sbjct: 456 GWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDS 515
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
V +EM+ GL N Y YT L++ + GK EA+ + +MQ+ G++ +LI+
Sbjct: 516 MAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDG 575
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
CK G + + +M N L ++
Sbjct: 576 LCKIGLVQQAVRYFDHMTRNGLQPNIMIY------------------------------- 604
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
T I+G L K L +L + ++DK I D V +++I+ N
Sbjct: 605 -------TALIDG-----------LCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
H AL V++ + L+ AY +LI + +++EM + G
Sbjct: 647 MKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKG----- 701
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
++P+ C L+ Y+ G ++AL ++ M
Sbjct: 702 ------------------------IIPDQVLC----ICLLRKYYELGDINEALALHDDMA 733
Query: 456 RKGI 459
R+G+
Sbjct: 734 RRGL 737
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 183/452 (40%), Gaps = 31/452 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++G D TY +++D +G+ ++ VFE M++ G D +TY S+++ +
Sbjct: 278 KAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERI 337
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A MK + P +V+Y+ + + EA + +MI+ GL PN +TYT L
Sbjct: 338 PQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSL 397
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ + G EA ++ S+MQ+AGV + L++ C+ G R + + +
Sbjct: 398 IDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGW 457
Query: 238 ALRYPVFKEALQTF---KVADENDSLLWQVHPQ-FSPEF---------------ISDNDA 278
L ++ + K+ ++ +L +++ + P+ I D+ A
Sbjct: 458 TLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMA 517
Query: 279 V--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
V E + + I L+ K +LL + D I++ +I+ C
Sbjct: 518 VIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLC 577
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
A+ F++ + L Y ALI L K + + + EM G S
Sbjct: 578 KIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637
Query: 397 LGALLIHRLGSARRPVPAA------KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+ LI G+ + P ++ + E C YT+LI + G A +
Sbjct: 638 VYTSLID--GNMKHGNPGEALSLRNRMVEIGMELDLCA--YTSLIWGFSRYGQVQLAKSL 693
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M RKGI P LL +LG +++A
Sbjct: 694 LDEMLRKGIIPDQVLCICLLRKYYELGDINEA 725
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 175/440 (39%), Gaps = 23/440 (5%)
Query: 52 FFNWVSRSRGFNHDRF-TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
FF+ + +R F + T+ ++ + + + F M + + + ++H
Sbjct: 166 FFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHR 225
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
LS + A++ +++M + P++ +Y + L ++ A +++EM +GL P+
Sbjct: 226 LSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPD 285
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TY L++ + G A+ +F +M++AG +PD N LI CK L
Sbjct: 286 IVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLH 345
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
MK+ L + + F A +L + + F EF T +
Sbjct: 346 GMKQRGLQPNVVTYSTLIDAFCKA----GMLLEANKFFVDMIRVGLQPNEFTYTSL---- 397
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
ID K +L L S + + L+ + +++ C+ R A F
Sbjct: 398 -IDAN-----CKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGA 451
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+K L + Y +L IK K +I+EEM K + L I L R
Sbjct: 452 LLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLC---R 508
Query: 411 PVPAAKIFSLLPEDQKCTAT-----YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+++ E C T YT LI YF G +A+ + + M GI ++ T
Sbjct: 509 QNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVT 568
Query: 466 FNVLLAGLEKLGRVSDAEIY 485
+ VL+ GL K+G V A Y
Sbjct: 569 YGVLIDGLCKIGLVQQAVRY 588
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A FN + +G + D+ YT+++D + + M E G+ +D YT
Sbjct: 617 LEEAKNLFNEM-LDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYT 675
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ S G V A ++ +EM K P V ++ + + EA ++ +M +R
Sbjct: 676 SLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARR 735
Query: 166 GL--------PPNCYT 173
GL P+C T
Sbjct: 736 GLISGTIDITVPSCLT 751
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 93/173 (53%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG N + TY TML F A +I F M+++ ID VTYT+V+H AG++
Sbjct: 218 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 277
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N+++EM + P++ +Y A +++L D V+ A +++EM++RG PN TY VL+
Sbjct: 278 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 337
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L AG++ E+ +M+ G +P+ N++I + E + + M
Sbjct: 338 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 390
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ AW FF + R D TYTT++ FG A I + VF+ M +G+ TY
Sbjct: 240 IRHAWEFF-LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 298
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L +V+ AV ++EEM + P + +Y ++ LF ++ + M
Sbjct: 299 AMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE 358
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G PN TY +++ Y + E+AL +F KM P+ NILI
Sbjct: 359 GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 406
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 99/494 (20%), Positives = 182/494 (36%), Gaps = 94/494 (19%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWV-SRSRGFNHDRFTYT 70
+T Q LL W VN VLK H P KA FF+++ + R + HD ++
Sbjct: 32 TTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGP--KALQFFHFLDNHHREYVHDASSFD 89
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+DI ++ + M+ I T+ V ++AG D AV ++ M
Sbjct: 90 LAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEH 149
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C+ + S+ + +L + RV++A ++++ + R + TY V++ + +
Sbjct: 150 GCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKT 208
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
LE+ +M E G+ P+ N +++ +AG+ R MK+ + + +
Sbjct: 209 LEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHG 268
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
F VA E +K+ V +
Sbjct: 269 FGVAGE--------------------------------------------IKRARNVFDE 284
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+ G++ A + +I+V C + A++ FE V+ T Y LI L
Sbjct: 285 MIREGVLP-----SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 339
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
F + E+++ M G P Q T
Sbjct: 340 FHAGEFSRGEELMQRMENEGCE-----------------------------PNFQ----T 366
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-----EIY 485
Y +I Y +KAL +++ M P+L T+N+L++G+ R D + +
Sbjct: 367 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAF 426
Query: 486 RKEKKSIQADALSK 499
KE +Q+ + S+
Sbjct: 427 AKEILRLQSKSGSR 440
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LIHR+ S R P+ K F+++ E Y SAG DKA+K++ M G
Sbjct: 107 LIHRMRSLRIG-PSPKTFAIVAER-------------YASAGKPDKAVKLFLNMHEHGCF 152
Query: 461 PSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
L +FN +L L K RV A E++R + D ++ + +
Sbjct: 153 QDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVI 195
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 187/455 (41%), Gaps = 25/455 (5%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N + K++ LF V R G + D TY T++D +A + + + M +
Sbjct: 44 INGLCKSNDLGAGMELFEELVER--GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 101
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC--YPTIVSYTAYMKILFLNDRVK 153
G + VTY+ +++ L G +D A + +EM K C P I++Y +++ L
Sbjct: 102 GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 161
Query: 154 EATDVYKEMIQRGL--PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
EA ++ + + L P+ T++ L++ L + G+ +EA +F M G P+ N
Sbjct: 162 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 221
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L+ CKA + ++ M + + + + F A D L +H S
Sbjct: 222 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 281
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ + VT +I L+ K N +L ++ K++Q D +
Sbjct: 282 CTPNVLVPDKVTFNI---------LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 332
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ C + + A + + + Y AL+ L K + + +EEM +G
Sbjct: 333 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGC 392
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSAD 445
L++ L A R A ++ S L P+ T TY L+ + +G +
Sbjct: 393 VPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD----TVTYNILVDGLWKSGKTE 448
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+A+ + + M KG P TF +GL + G ++
Sbjct: 449 QAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLA 483
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 168/422 (39%), Gaps = 39/422 (9%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M G+ VTY ++++ L + D+ + ++EE+ + +P +V+Y + L
Sbjct: 28 MARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 87
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM--QEAGVQPDKAAC 209
++EA ++ +M RG PN TY+VL+ L + G+ +EA E+ +M + V P+
Sbjct: 88 LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 147
Query: 210 NILIEKCCKAGETRTIILILRYMKENRL-----ALRYPVFKEALQTFKVADENDSLLWQ- 263
N ++ CK T ++R +++ L + + + L DE S+
Sbjct: 148 NSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM 207
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
+ + P I+ N LV L K + +++ ++DK +
Sbjct: 208 IAGGYVPNVITYN------------------ALVNGLCKADKMERAHAMIESMVDKGVTP 249
Query: 324 DSAVISTIIEVNCDHRRRDGAL-----LAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
D S +++ C R D AL +A L ++ + LI K F +
Sbjct: 250 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQ 309
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTA 433
+ + EEM V LI L A + A I L+ P + TY A
Sbjct: 310 ASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN---VVTYNA 366
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
L+ +G ++A + + M G P T+ L+ L + R DA E KS
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 494 AD 495
D
Sbjct: 427 WD 428
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 156/392 (39%), Gaps = 63/392 (16%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWE-EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
Y V+ L AGD A+ I+ EM PTIV+Y + L ++ + ++++E+
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++RG P+ TY L++ L +AG EEA + M G P+ ++LI CK G
Sbjct: 64 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG-- 121
Query: 223 RTIILILRYMKENRLALRYPVFKEALQ--TFKVADENDSLLWQVHPQFSPEFISDNDAVE 280
R +E +Q T K D P I+ N ++
Sbjct: 122 -----------------RIDEARELIQEMTRKSCD------------VLPNIITYNSFLD 152
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL--DSAVISTIIEVNCDH 338
L K+ L+ + D S+++ D+ ST+I+ C
Sbjct: 153 G------------------LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 194
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ D A F+ + Y AL+ L K + + ++E M G + V
Sbjct: 195 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 254
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCT--------ATYTALIGVYFSAGSADKALKI 450
++L+ A R A ++ + + CT T+ LI AG+ ++A +
Sbjct: 255 SVLVDAFCKASRVDEALELLHGMAS-RGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M K + P + TF L+ GL K G+V A
Sbjct: 314 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
+ + LF V+++ D T+ ++D +A ++ + + + +LM G+ + VTY +
Sbjct: 309 QASALFEEMVAKN--LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++H L +G ++ A EEM C P ++Y + + L R +A + E+ G
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD--------------------- 205
P+ TY +L++ L ++GK E+A+ + +M G QPD
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTM 486
Query: 206 --------------KAACNILIEKCCKAGE 221
C+ +++ C++G+
Sbjct: 487 ELLRVVLAKGMLPDATTCSSILDWVCRSGK 516
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 186/427 (43%), Gaps = 28/427 (6%)
Query: 65 DRFTYTTMLDIFGEAKR--ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D FTYT+M I G ++ + S VF M ++G + VTY+++++ L ++G V+ A +
Sbjct: 249 DTFTYTSM--ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDR--VKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM L PT ++T I+ L D ++A ++ +M +G PN YTYT L+
Sbjct: 307 LIREMILHGILPT--AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 364
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +G + A+ +F +M GV P+ N LI + + ++L M N +
Sbjct: 365 LCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPN 424
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT--TDIEGPLSIDQGLVL 298
+ E ++ + + + + ++ + + VT T I+G D G
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMN-----NMLQRGHSANLVTYNTIIKG--YCDSG--- 474
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
N + +L + D + D + +I C + + A F V L
Sbjct: 475 ------NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP 528
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y ALI K ++E M ++G V +LIH L A ++
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588
Query: 419 SLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
++ E+ TYTA+I GS AL+++ M +G P+L T++ L+ L +
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648
Query: 477 GRVSDAE 483
G+V +AE
Sbjct: 649 GKVEEAE 655
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 167/366 (45%), Gaps = 14/366 (3%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+++ K D ++ +++ ME A+ FN + G + TYT ++D + +
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD-GLCPNEVTYTALIDGYCK 542
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+++ + + E M+ G + TY ++H L+ + GA + + M + +P +V+
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YTA + L N A +++ +MI++G PN TY+ L+ L + GK EEA +F++++
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE---NRLALRYPVFKEALQT-FKVA 254
G+ PD+ +IE +G+ L M + Y V + L+ + +A
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 722
Query: 255 DENDSLLWQVHPQFSPEF-ISDNDAVEFVT---TDIEGPLS--IDQGLVLILLKKKNLVA 308
D+ + L V P S + +D DAV ++ +++ LS + LV L
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 782
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ LL ++ + + D ++++ R D A+ F++ + Y LI
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842
Query: 369 ILIKLN 374
L +L+
Sbjct: 843 ALCQLH 848
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 4/203 (1%)
Query: 35 TVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N+++K + + +KA L N + + RG + + TY T++ + ++ +S + +L
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQ-RGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M++ G D +YT ++ ++ A ++ EM P V+YTA + +++
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ AT + + M + G PN TY VL+ L + + A E+ M E G+ P+
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 212 LIEKCCKAGETRTIILILRYMKE 234
+I+ CK G T + + M E
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIE 628
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 172/480 (35%), Gaps = 97/480 (20%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M + F + +S+S G F Y+ +L +++ + M +G+ + + Y
Sbjct: 161 MARTMSFLDMLSQS-GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYN 219
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTI----------------------------- 136
+V++ L G+V A I +++ E P
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279
Query: 137 ------VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
V+Y+ + L + RV EA D+ +EMI G+ P +T T + L G YE+A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP--VFKEAL 248
+F M+ G +P+ LI C +G + I + M + + +P V AL
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV---FPNTVTYNAL 396
Query: 249 QTFKVADENDSLLWQV-----HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
V + + V SP ++ N+ + +G ++ K
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI--------------KGYCILGDPK 442
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
K ++ ++++L + + +TII+ CD AL + + +Y
Sbjct: 443 KAMLVMNNML----QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI K++ + EM G L P
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDG-----------------------------LCPN 529
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ TA LI Y D A + + M R G P++ T+NVL+ GL K S AE
Sbjct: 530 EVTYTA----LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +G+ D Y S++ L +VD A+ +++ M + C + Y + L R
Sbjct: 790 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 849
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
KEA ++ M+ R P+ VL++ L+R G + +E M+ P
Sbjct: 850 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 190/454 (41%), Gaps = 42/454 (9%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+TT+++ R+ + + M E+G DAVTY ++++ + GD A+N+ +M
Sbjct: 12 TFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKM 71
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ +V Y+A + L + +A +++ EM ++G+ PN TY +++ GK+
Sbjct: 72 DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+A ++ M E + PD + LI K G+ + R M + +
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191
Query: 248 LQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE---------GPLSIDQ 294
+ F ++ D V SP+ I+ N ++ G +++ Q
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251
Query: 295 GLVLILLKKK---NLVAIDSLLSGIMDKS----------------IQLDSAVISTIIEVN 335
L ++ ++V ++LL+G+ + + LD+A + II
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG--HSL 393
C + D A F + + Y LIG+ +K F + +I EM G S
Sbjct: 312 CKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPST 371
Query: 394 GVYL----GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALK 449
Y G +RL AR+ V + P+ T++ LI Y AG D L+
Sbjct: 372 VTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPD----VVTFSTLIKGYCKAGRVDDGLE 427
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++ MC++G+ T+N L+ G K+G ++ A+
Sbjct: 428 LFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQ 461
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 173/427 (40%), Gaps = 62/427 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY M+D + + S + + M E+ I+ D VT++++++ G V G
Sbjct: 109 KGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSG 168
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM + +PT ++Y++ + + R+++A ++ M+ +G P+ T L++
Sbjct: 169 AEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLID 228
Query: 180 YLVRA-----------GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
RA G A ++F +M GV PD CN L+ C+ G+ + +
Sbjct: 229 GCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEM 288
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
+ +++++ L + ++ D W + + + VT +I
Sbjct: 289 FKVFQKSKMDLDTATCNIIINGMCKGNKVDE-AWDLFNSLPVNGVE----TDVVTYNI-- 341
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
L+ + +K+ N + + + ++ K I + ST+
Sbjct: 342 -------LIGVFVKEGNFLRAEDIYLEMLCKGI-----IPSTV----------------- 372
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
Y +++ K N + ++V+ M G S V + LI A
Sbjct: 373 -------------TYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKA 419
Query: 409 RRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
R ++FS + + T TY ALI + G + A I++ M G+ P TF
Sbjct: 420 GRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITF 479
Query: 467 NVLLAGL 473
+LAGL
Sbjct: 480 RSMLAGL 486
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 7/220 (3%)
Query: 8 VYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRG 61
++ + + AQDL + + + D T N +L + +EKA F +S+
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSK- 296
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ D T +++ + ++ +F + G+ D VTY ++ G+ A
Sbjct: 297 MDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAE 356
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+I+ EM K P+ V+Y + + +R++EA + M+ G P+ T++ L++
Sbjct: 357 DIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGY 416
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+AG+ ++ LE+FS+M + G+ D N LI CK G+
Sbjct: 417 CKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGD 456
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 167/411 (40%), Gaps = 74/411 (18%)
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M++ G P N T+T LM L R G+ +AL + +M E G QPD ++ CK G+
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADEN----DSLLWQVHPQ-FSPEFISDN 276
T + + +LR M E+++ ++ + D N ++ ++H + P ++ N
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRL-CKDGNHIKAQNIFTEMHEKGIFPNVLTYN 119
Query: 277 -------------DAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDK 319
DA + + IE + D L+ +K+ + + L ++ +
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM------------------------- 354
+I + S++I+ C H R + A F+ V
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239
Query: 355 ------DLNLERTAYLALI--GI---LIKLNT----------FPKVAEIVEEMTKAGHSL 393
++N+ + + +I G+ ++ NT K E+ + K+ L
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL 299
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
++I+ + + A +F+ LP + + TY LIGV+ G+ +A IY
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY 359
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
M KGI PS T+N ++ G K R+ +A R+ S+ ++ S D V
Sbjct: 360 LEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA---RQMVDSMVSEGCSPDVV 407
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 1/190 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++AW FN + + G D TY ++ +F + + ++ M KGI VTY
Sbjct: 317 VDEAWDLFNSLPVN-GVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYN 375
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ ++ A + + M + C P +V+++ +K RV + +++ EM QR
Sbjct: 376 SMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQR 435
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL + TY L+ + G A +IF +M +GV PD ++ C E +
Sbjct: 436 GLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKG 495
Query: 226 ILILRYMKEN 235
+ +L ++++
Sbjct: 496 LTMLEDLQKS 505
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 197/463 (42%), Gaps = 39/463 (8%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQ 93
TV Q L+ FF+WVS ++GF+H ++ ML+ G A+ ++ + ++F + +
Sbjct: 70 TVLQTLRLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIER 128
Query: 94 EKG--INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ + + S++ NAG +V +++ MK P+++++ + + IL R
Sbjct: 129 RSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGR 188
Query: 152 VKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
A D++ EM + G+ P+ YT+ L+ + +EA IF M+ PD N
Sbjct: 189 TGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYN 248
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPV--FKEALQTFKVADENDSLLWQVHPQF 268
+I+ C+AG+ + +L M + + V + ++ + + E D + H
Sbjct: 249 TIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDML 308
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD--KSIQLDSA 326
S +AV + T L+ L + I +L G D + D+
Sbjct: 309 SRGL--KPNAVTYNT------------LIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+ +I+ +CD D A+ F+ + M L+ + +Y LI L N F + + E+
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPV-----------PAAKIF-SLLPEDQKCTATYTAL 434
+ V LG L +A P+ A K+F L+ + +Y L
Sbjct: 415 FEK----EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTL 470
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
I + G A ++ M R+ P L T+ +L+ GL K+G
Sbjct: 471 ITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 513
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 139/332 (41%), Gaps = 30/332 (9%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D T+ ++ +A + + VF+ M ++ D+ +Y+ ++ L + D A
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 122 NIWEEMKLKE-------CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL--PPNCY 172
++ E+ KE C P +Y + L N + K+A V++++++RG+ PP
Sbjct: 409 TLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP--- 465
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+Y L+ R GK++ A E+ M PD +LI+ K GE L+ M
Sbjct: 466 SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525
Query: 233 KENRLALRYPVFKEALQTF---KVADENDSLLW-------QVHPQFSPE-----FISDND 277
+ F L K A+E+ L+ + + S + F S
Sbjct: 526 LRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQK 585
Query: 278 AVEFVTTDI---EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
F+ + G L + L+ L + + L+ +L+ ++KS +D +T+IE
Sbjct: 586 EKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEG 645
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
C H+R A + V++ + + + ++ L
Sbjct: 646 LCKHKRHSEAFSLYNELVELGNHQQLSCHVVL 677
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 400 LLIHRLGSARR-PVPAAKIFSLLPEDQKCTAT----YTALIGVYFSAGSADKALKIYKTM 454
L++ LG AR V +FS+ C + +LI Y +AG +++K+++TM
Sbjct: 105 LMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTM 164
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ GI PS+ TFN LL+ L K GR A
Sbjct: 165 KQMGISPSVLTFNSLLSILLKRGRTGMAH 193
>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 205/519 (39%), Gaps = 45/519 (8%)
Query: 1 MRDTISNVYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS 59
+ DTI +++ W + Q+ +++L +WD V VL +E A FF W RS
Sbjct: 87 LEDTIC---RMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERS 143
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
HDR T+ M+ + GE +++ + + M EKG+ D + ++ AG V
Sbjct: 144 GLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQE 203
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+V I+++MK TI SY + K++ R A + +M+ G+ P +TY +++
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ + E AL F M+ G+ PD A N +I C+ + + MK N++
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN------------DAVEFVTTD-- 285
+ ++ + D D L ++ + I N DA + V
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGL-RIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 286 -----IEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ D + L LL K ++ A +L + ++ ++ +IE C
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 337 DHRRRDGALLAFEYSVKMD--------LNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ A+ + ++ + L +E +AY +I L K + ++ K
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMK 502
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAA-----KIFSLLPEDQKCTATYTALIGVYFSAGS 443
G L L+ G A+ P + KI S ++ A Y LI Y S G
Sbjct: 503 RGVQDQDALNNLI---RGHAKEGNPDSSYEILKIMSRRGVPRESNA-YELLIKSYMSKGE 558
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A +M G P F ++ L + GRV A
Sbjct: 559 PGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTA 597
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 167/393 (42%), Gaps = 83/393 (21%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+YTTM+ + R+ +FE M+ GI +A TY++++ L +AG + A NI + M
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKE---ATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
K P + ++K+L + + AT+V K M +P Y VL+E +A
Sbjct: 387 MAKHIAPK--DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKA 444
Query: 185 GKYEEALEI-------------------------------------------FSKMQEAG 201
Y A+++ F ++ + G
Sbjct: 445 SAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN---- 257
VQ D+ A N LI K G + IL+ M + ++ ++++ E
Sbjct: 505 VQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAK 563
Query: 258 ---DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK-------NLV 307
DS++ H S F S +E + D G + +++I++ K +L+
Sbjct: 564 TALDSMVEDGHVPDSSLFRS---VIESLFED--GRVQTASRVMMIMIDKNVGIEDNMDLI 618
Query: 308 A--IDSLL-SGIMDKSI-QLD-------SAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
A +++LL G +++++ ++D +A + +++ V + + AL ++ ++ DL
Sbjct: 619 AKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDL 678
Query: 357 NLERTAY----LALIGILIKLNTFPKVAEIVEE 385
+LE ++Y AL+G LN + + +I+E+
Sbjct: 679 SLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEK 711
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
+YT +I Y + D L+I++ M GI P+ T++ LL GL G++ +A
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA------- 379
Query: 490 KSIQADALSKDAVPMEEKI 508
K+I + ++K P + I
Sbjct: 380 KNILKNMMAKHIAPKDNSI 398
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++R D FTYTT++D + R S + VFE M +G N VTYT+++H AG +
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSL 333
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + M K P + +YT ++ LF N +V+ AT+ ++++++ PP Y+ L
Sbjct: 334 QDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSAL 393
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ +A +EA++ + +M + + PD A C +L+E CK G T
Sbjct: 394 VRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL---MQEKGINIDAVT 103
E LF SR + T+ ++ +A R +++ FEL M+ + + D T
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALISGLCKADR---LEHAFELVKQMKARDLRADTFT 284
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
YT++M L G ++EEM + C P++V+YT + +++A V + M+
Sbjct: 285 YTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMV 344
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+G+PP+ TYTVL+E L GK A E F K+ P + L+ CCKA
Sbjct: 345 AKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVD 404
Query: 224 TIILILRYMKENRLA 238
+ M + RLA
Sbjct: 405 EAVKYYVEMLDRRLA 419
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 163/437 (37%), Gaps = 57/437 (13%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK-GINIDAVTY 104
M++A F + S T +++ F E + + +F M++ + +A TY
Sbjct: 54 MDQAMAIFRGIQCSPSV----ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTY 109
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
T+++ +D A + EE C +++ T+ + RV EA + +M++
Sbjct: 110 TAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVE 167
Query: 165 R-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ P+ + V++ +AG+ EA E+ + G P+ LI+ CK+G
Sbjct: 168 KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN-- 225
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
EALQ FKV D H + P ++ N
Sbjct: 226 --------------------LSEALQLFKVLSSRDH-----HAE--PNVVTFN------- 251
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
L+ L K L L+ + + ++ D+ +T+++ C R
Sbjct: 252 -----------ALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
FE ++ N Y L+ K + +++ M G V +L+
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 404 RLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L + A + F + ++ C Y+AL+ A D+A+K Y M + + P
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420
Query: 462 SLGTFNVLLAGLEKLGR 478
T +L+ L K GR
Sbjct: 421 DPATCKLLVEMLCKRGR 437
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 8/243 (3%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPME---KAWLFFNWVS 57
+RD + + + T D A + + + T+N ++ ++ KA F+ +
Sbjct: 38 LRDINLLLASLCQAGTMDQAMAIFRGIQCSPSVITLNILINGFCELQLLDKALELFHEME 97
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ + TYT ++ + + R+ + + E + + D + TSV A V
Sbjct: 98 KNFALVPEATTYTAIIKCYCKMDRLDQARQLLE--ESSCCSSDVIAITSVARGFCKAQRV 155
Query: 118 DGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
D A + +M + K P IV++ + RV+EA ++ + ++ G PN TYT
Sbjct: 156 DEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTT 215
Query: 177 LMEYLVRAGKYEEALEIFSKM--QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L++ ++G EAL++F + ++ +P+ N LI CKA +++ MK
Sbjct: 216 LIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKA 275
Query: 235 NRL 237
L
Sbjct: 276 RDL 278
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 159/377 (42%), Gaps = 58/377 (15%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN +T++VL+ L +AG+ EA+E +++M E P+ N+L+ C+AG + I
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS--PEFISDNDAVE------ 280
R ++ + + + ++ D+ L ++ F+ PE + ++
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 281 -------------FVTTDIEGPLSIDQG------------LVLILLKKK----NLVAIDS 311
++D+ S+ +G L+L +++KK ++VA +
Sbjct: 121 RLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 312 LLSG------------IMDKSIQL----DSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
++ G +++ + + ++ +T+I+ C AL F+ D
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 356 LNLERT--AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ E + ALI L K + E+V++M + L+ L R
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 414 AAKIF-SLLPED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
+++F +L E TYT L+ + AGS A ++ ++M KGI P + T+ VLL
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 472 GLEKLGRVSDA-EIYRK 487
GL + G+V A E + K
Sbjct: 361 GLFENGKVRTATEFFEK 377
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++R D FTYTT++D + R S + VFE M +G N VTYT+++H AG +
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSL 333
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + M K P + +YT ++ LF N +V+ AT+ ++++++ PP Y+ L
Sbjct: 334 QDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSAL 393
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ +A +EA++ + +M + + PD A C +L+E CK G T
Sbjct: 394 VRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL---MQEKGINIDAVT 103
E LF SR + T+ ++ +A R +++ FEL M+ + + D T
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALISGLCKADR---LEHAFELVKQMKARDLRADTFT 284
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
YT++M L G ++EEM + C P++V+YT + +++A V + M+
Sbjct: 285 YTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMV 344
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+G+PP+ TYTVL+E L GK A E F K+ P + L+ CCKA
Sbjct: 345 AKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVD 404
Query: 224 TIILILRYMKENRLA 238
+ M + RLA
Sbjct: 405 EAVKYYVEMLDRRLA 419
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 163/437 (37%), Gaps = 57/437 (13%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK-GINIDAVTY 104
M++A F + S T +++ F E + + +F M++ + +A TY
Sbjct: 54 MDQAMAIFRGIQCSPSV----ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTY 109
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
T+++ +D A + EE C +++ T+ + RV EA + +M++
Sbjct: 110 TAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVE 167
Query: 165 R-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ P+ + V++ +AG+ EA E+ + G P+ LI+ CK+G
Sbjct: 168 KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN-- 225
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
EALQ FKV D H + P ++ N
Sbjct: 226 --------------------LSEALQLFKVLSSRDH-----HAE--PNVVTFN------- 251
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
L+ L K L L+ + + ++ D+ +T+++ C R
Sbjct: 252 -----------ALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
FE ++ N Y L+ K + +++ M G V +L+
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 404 RLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L + A + F + ++ C Y+AL+ A D+A+K Y M + + P
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420
Query: 462 SLGTFNVLLAGLEKLGR 478
T +L+ L K GR
Sbjct: 421 DPATCKLLVEMLCKRGR 437
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 160/377 (42%), Gaps = 58/377 (15%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN +T++VL+ L +AG+ EA+E +++M E P+ N+L+ C+AG+ + I
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS--PEFISDNDAVE------ 280
R ++ + + + ++ D+ L ++ F+ PE + ++
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 281 -------------FVTTDIEGPLSIDQG------------LVLILLKKK----NLVAIDS 311
++D+ S+ +G L+L +++KK ++VA +
Sbjct: 121 RLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 312 LLSG------------IMDKSIQL----DSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
++ G +++ + + ++ +T+I+ C AL F+ D
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 356 LNLERT--AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ E + ALI L K + E+V++M + L+ L R
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 414 AAKIF-SLLPED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
+++F +L E TYT L+ + AGS A ++ ++M KGI P + T+ VLL
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 472 GLEKLGRVSDA-EIYRK 487
GL + G+V A E + K
Sbjct: 361 GLFENGKVRTATEFFEK 377
>gi|168066970|ref|XP_001785401.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662982|gb|EDQ49775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 318
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ H+ +TYT ++D++G AK +++ V M E G ++ VT++ VM W A ++ G
Sbjct: 4 GYQHNMYTYTALIDLYGRAKNYEAVEEVLAEMCEVGCDVSIVTFSLVMRWYREAKNLAGI 63
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ E M+ + C P YT ++ L + +EA V+KEM PN +TY VL+
Sbjct: 64 RRVLEHMQREGCLPNEYIYTTFIDALDKDTCHEEALAVFKEMRDSNWEPNIFTYNVLIHS 123
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L AGK + A E+F ++ E +P+ IL+ KAGE + L+ M E
Sbjct: 124 LATAGKLDGAREMFGRLPEPHHRPNFVTYTILVTAHVKAGELEKAVHFLKTMME 177
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ + YTT +D + VF+ M++ + TY ++H L+ AG +DGA ++
Sbjct: 78 NEYIYTTFIDALDKDTCHEEALAVFKEMRDSNWEPNIFTYNVLIHSLATAGKLDGAREMF 137
Query: 125 EEMKLKECYPTIVSYT----AYMK---------------------------ILFLNDRVK 153
+ P V+YT A++K ILF K
Sbjct: 138 GRLPEPHHRPNFVTYTILVTAHVKAGELEKAVHFLKTMMEAGFMPSHGLRSILFTALMAK 197
Query: 154 -EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
A +V M +RG PN YTY++L++ L R + AL+++ +M +A +P+ L
Sbjct: 198 GRADEVLDNMKERGHRPNVYTYSMLIDLLSRTRNHAHALKMYKEMFKANSKPNVNTYTTL 257
Query: 213 IEKCCKAGE---TRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
I + G+ T+ + L + N A+ Y + +A K A
Sbjct: 258 IHSLARTGKVNAANTMFMGLPSLGINPSAVTYTIMIQAFLRAKAA 302
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y I L K + + +EM + ++ +LIH L +A + A ++F LP
Sbjct: 82 YTTFIDALDKDTCHEEALAVFKEMRDSNWEPNIFTYNVLIHSLATAGKLDGAREMFGRLP 141
Query: 423 EDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
E TYT L+ + AG +KA+ KTM G PS G ++L L GR
Sbjct: 142 EPHHRPNFVTYTILVTAHVKAGELEKAVHFLKTMMEAGFMPSHGLRSILFTALMAKGRAD 201
Query: 481 DAEIYRKEK 489
+ KE+
Sbjct: 202 EVLDNMKER 210
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 57/115 (49%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V + M+E+G + TY+ ++ LS + A+ +++EM P + +YT + L
Sbjct: 203 VLDNMKERGHRPNVYTYSMLIDLLSRTRNHAHALKMYKEMFKANSKPNVNTYTTLIHSLA 262
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+V A ++ + G+ P+ TYT++++ +RA AL + M+ G+
Sbjct: 263 RTGKVNAANTMFMGLPSLGINPSAVTYTIMIQAFLRAKAAGRALALHEAMRSDGI 317
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 123/317 (38%), Gaps = 39/317 (12%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G N YTYT L++ RA YE E+ ++M E G ++++ +A I
Sbjct: 4 GYQHNMYTYTALIDLYGRAKNYEAVEEVLAEMCEVGCDVSIVTFSLVMRWYREAKNLAGI 63
Query: 226 ILILRYMKENRLALR---YPVFKEALQTFKVADENDSLLWQVH-PQFSPEFISDNDAVEF 281
+L +M+ Y F +AL +E ++ ++ + P + N +
Sbjct: 64 RRVLEHMQREGCLPNEYIYTTFIDALDKDTCHEEALAVFKEMRDSNWEPNIFTYNVLIHS 123
Query: 282 VTT--DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV--ISTIIEVNC- 336
+ T ++G + G + + N V L++ + K+ +L+ AV + T++E
Sbjct: 124 LATAGKLDGAREM-FGRLPEPHHRPNFVTYTILVTAHV-KAGELEKAVHFLKTMMEAGFM 181
Query: 337 -DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
H R A + D E+++ M + GH V
Sbjct: 182 PSHGLRSILFTALMAKGRAD-------------------------EVLDNMKERGHRPNV 216
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLL--PEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
Y ++LI L R A K++ + + TYT LI G + A ++
Sbjct: 217 YTYSMLIDLLSRTRNHAHALKMYKEMFKANSKPNVNTYTTLIHSLARTGKVNAANTMFMG 276
Query: 454 MCRKGIHPSLGTFNVLL 470
+ GI+PS T+ +++
Sbjct: 277 LPSLGINPSAVTYTIMI 293
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 93/173 (53%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG N + TY TML F A +I F M+++ ID VTYT+V+H AG++
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N+++EM + P++ +Y A +++L D V+ A +++EM++RG PN TY VL+
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L AG++ E+ +M+ G +P+ N++I + E + + M
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ AW FF + R D TYTT++ FG A I + VF+ M +G+ TY
Sbjct: 246 IRHAWEFF-LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L +V+ AV ++EEM + P + +Y ++ LF ++ + M
Sbjct: 305 AMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE 364
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G PN TY +++ Y + E+AL +F KM P+ NILI
Sbjct: 365 GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/494 (20%), Positives = 183/494 (37%), Gaps = 94/494 (19%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWV-SRSRGFNHDRFTYT 70
+T Q LL W VN VLK H P KA FF+++ + R + HD ++
Sbjct: 38 TTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGP--KALQFFHFLDNHHREYVHDASSFD 95
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+DI ++ + M+ I T+ V ++AG D AV ++ M
Sbjct: 96 LAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEH 155
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C+ + S+ + +L + RV++A ++++ + R + TY V++ + +A
Sbjct: 156 GCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKA 214
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
LE+ +M E G+ P+ N +++ +AG+ R MK+ + + +
Sbjct: 215 LEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHG 274
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
F VA E +K+ V +
Sbjct: 275 FGVAGE--------------------------------------------IKRARNVFDE 290
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+ G++ A + +I+V C + A++ FE V+ T Y LI L
Sbjct: 291 MIREGVLP-----SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
F + E+++ M G P Q T
Sbjct: 346 FHAGEFSRGEELMQRMENEGCE-----------------------------PNFQ----T 372
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-----EIY 485
Y +I Y +KAL +++ M P+L T+N+L++G+ R D + +
Sbjct: 373 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAF 432
Query: 486 RKEKKSIQADALSK 499
KE +Q+ + S+
Sbjct: 433 AKEILRLQSKSGSR 446
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LIHR+ S R P+ K F+++ E Y SAG DKA+K++ M G
Sbjct: 113 LIHRMRSLRIG-PSPKTFAIVAER-------------YASAGKPDKAVKLFLNMHEHGCF 158
Query: 461 PSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
L +FN +L L K RV A E++R + D ++ + +
Sbjct: 159 QDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVI 201
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 185/434 (42%), Gaps = 28/434 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
R +G T T + FG A + ++M + ++ + D V +T+ MHWL
Sbjct: 45 RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRR 104
Query: 117 VDGAVNIWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTY 174
V+ A+ ++++M+ +C P +V+Y + A D+++ + Q G PN ++
Sbjct: 105 VEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSF 164
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ +L + + +AL +F +M AG++ D CN LI C+ G R +L +M
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTA 224
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ A ++A T+ + Q+H S ++ +D + I Q
Sbjct: 225 HACA------RDAF-TYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYN---FIIQ 274
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
G + + L L M K D + +I + C ++ + AL F+ + +
Sbjct: 275 GFI----RCGRLAEATQLFESTMTKESVPDVFTYNLLIAL-CKSKQLEEALTLFQEAEQG 329
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ L+ Y L+ K K E+ M KAG + +LI LG + A
Sbjct: 330 GVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEA 389
Query: 415 AKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
++ ++P+ + TY +I V S G +KA + M R+ P + T+N
Sbjct: 390 LELLEDMNRKGIMPDCR----TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 445
Query: 469 LLAGLEKLGRVSDA 482
LL GL+KL R +A
Sbjct: 446 LLNGLKKLRRTDEA 459
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 3/191 (1%)
Query: 32 DSYTVNQV--LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D +T N + L +E+A F + G D FTY+ ++D FG+A R + VF
Sbjct: 300 DVFTYNLLIALCKSKQLEEALTLFQEAEQG-GVVLDVFTYSYLMDAFGKAGRAAKALEVF 358
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
MQ+ G D V Y ++ L G VD A+ + E+M K P +Y + +L
Sbjct: 359 YNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSC 418
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
R ++A + M +R P+ TY L+ L + + +EA ++F +MQ PD
Sbjct: 419 GRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTF 478
Query: 210 NILIEKCCKAG 220
LI+ KAG
Sbjct: 479 GTLIDTLAKAG 489
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 153/407 (37%), Gaps = 87/407 (21%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY ++ + ++K++ +F+ ++ G+ +D TY+ +M AG A+ ++
Sbjct: 300 DVFTYNLLIALC-KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVF 358
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M+ C P V Y + L +V EA ++ ++M ++G+ P+C TY ++++ L
Sbjct: 359 YNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSC 418
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+YE+A F M+ PD N L+ K T + M+ N+ F
Sbjct: 419 GRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTF 478
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ T A + L Q S + A
Sbjct: 479 GTLIDTLAKAGRMEDALEQ-----SARLVKMGHA-------------------------P 508
Query: 305 NLVAIDSLLSGIMDKSIQLDSA--VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
N ++L+SG +S Q+D + +IE +C F S+
Sbjct: 509 NSYIYNALISGFC-RSGQVDKGYELFQDMIECSC-----------FPDSI---------T 547
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y L+ + E+++EM + GH+ PA
Sbjct: 548 YTILVLGFSRRGHTSMAMELLQEMVREGHT--------------------PA-------- 579
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
ATY LI AG + A ++K M KG +P + T++ L
Sbjct: 580 -----LATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 9/211 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY ++D+ R F +M+ + + D VTY ++++ L D
Sbjct: 399 KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDE 458
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++++EM+ +C P + ++ + L R+++A + +++ G PN Y Y L+
Sbjct: 459 ACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALIS 518
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-KENRLA 238
R+G+ ++ E+F M E PD IL+ + G T + +L+ M +E
Sbjct: 519 GFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH-- 576
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
AL T+ V + S+ QV ++
Sbjct: 577 ------TPALATYNVLIRSLSMAGQVEDAYT 601
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 2/189 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
SY ++ K + +F+N + G D Y ++ G+ ++ + E M
Sbjct: 339 SYLMDAFGKAGRAAKALEVFYNM--QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 396
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
KGI D TY V+ LS+ G + A + + MK ++ P +V+Y + L R
Sbjct: 397 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRT 456
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EA D++ EM P+ T+ L++ L +AG+ E+ALE +++ + G P+ N L
Sbjct: 457 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNAL 516
Query: 213 IEKCCKAGE 221
I C++G+
Sbjct: 517 ISGFCRSGQ 525
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 183/448 (40%), Gaps = 45/448 (10%)
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T L + +A+R+ M DA TY +++ AG + + E +
Sbjct: 206 TCRLGMLRQARRL------LHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARH 259
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
C + V+Y ++ R+ EAT +++ + + P+ +TY +L+ L ++ + EE
Sbjct: 260 DGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLIA-LCKSKQLEE 318
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKE 246
AL +F + ++ GV D + L++ KAG + + M++ + Y V
Sbjct: 319 ALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLIS 378
Query: 247 ALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK- 304
L DE LL ++ + P+ + N ++ +++ G ++ ++K
Sbjct: 379 CLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSC--GRYEKAYSFFGMMKRRKH 436
Query: 305 --NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
++V ++LL+G+ K + RR D A F+ + T
Sbjct: 437 SPDVVTYNTLLNGL--KKL-----------------RRTDEACDLFDEMQANKCMPDLTT 477
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
+ LI L K E + K GH+ Y+ LI R K + L
Sbjct: 478 FGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFC---RSGQVDKGYELFQ 534
Query: 423 EDQKCTA-----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ +C+ TYT L+ + G A+++ + M R+G P+L T+NVL+ L G
Sbjct: 535 DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAG 594
Query: 478 RVSDAEIYRKE--KKSIQADALSKDAVP 503
+V DA KE K D + A+P
Sbjct: 595 QVEDAYTLFKEMIAKGFNPDMQTYSALP 622
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 14/243 (5%)
Query: 1 MRDTISNVYKIL-----KYSTWDSAQDLLKNLPIKW---DSYTVN---QVLKTHPPMEKA 49
M DT+ VY +L K D A +LL+++ K D T N VL + EKA
Sbjct: 367 MPDTV--VYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKA 424
Query: 50 WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMH 109
+ FF + R R + D TY T+L+ + +R +F+ MQ D T+ +++
Sbjct: 425 YSFFGMMKR-RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLID 483
Query: 110 WLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
L+ AG ++ A+ + P Y A + + +V + +++++MI+ P
Sbjct: 484 TLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFP 543
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ TYT+L+ R G A+E+ +M G P A N+LI AG+ +
Sbjct: 544 DSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLF 603
Query: 230 RYM 232
+ M
Sbjct: 604 KEM 606
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + Y ++ F + ++ +F+ M E D++TYT ++ S G A
Sbjct: 505 GHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMA 564
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + +EM + P + +Y ++ L + +V++A ++KEMI +G P+ TY+ L
Sbjct: 565 MELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 186/427 (43%), Gaps = 28/427 (6%)
Query: 65 DRFTYTTMLDIFGEAKR--ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D FTYT+M I G ++ + S VF M ++G + VTY+++++ L ++G V+ A +
Sbjct: 249 DTFTYTSM--ILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDR--VKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM L PT ++T I+ L D ++A ++ +M +G PN YTYT L+
Sbjct: 307 LIREMILHGILPT--AHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISG 364
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +G + A+ +F +M GV P+ N LI + + ++L M N +
Sbjct: 365 LCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPN 424
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT--TDIEGPLSIDQGLVL 298
+ E ++ + + + + ++ + + VT T I+G D G
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMN-----NMLQRGHSANLVTYNTIIKG--YCDSG--- 474
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
N + +L + D + D + +I C + + A F V L
Sbjct: 475 ------NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP 528
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y ALI K ++E M ++G V +LIH L A ++
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588
Query: 419 SLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
++ E+ TYTA+I GS AL+++ M +G P+L T++ L+ L +
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648
Query: 477 GRVSDAE 483
G+V +AE
Sbjct: 649 GKVEEAE 655
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 167/366 (45%), Gaps = 14/366 (3%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+++ K D ++ +++ ME A+ FN + G + TYT ++D + +
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD-GLCPNEVTYTALIDGYCK 542
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+++ + + E M+ G + TY ++H L+ + GA + + M + +P +V+
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YTA + L N A +++ +MI++G PN TY+ L+ L + GK EEA +F++++
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE---NRLALRYPVFKEALQT-FKVA 254
G+ PD+ +IE +G+ L M + Y V + L+ + +A
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 722
Query: 255 DENDSLLWQVHPQFSPEF-ISDNDAVEFVT---TDIEGPLS--IDQGLVLILLKKKNLVA 308
D+ + L V P S + +D DAV ++ +++ LS + LV L
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 782
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ LL ++ + + D ++++ R D A+ F++ + Y LI
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842
Query: 369 ILIKLN 374
L +L+
Sbjct: 843 ALCQLH 848
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 4/203 (1%)
Query: 35 TVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N+++K + + +KA L N + + RG + + TY T++ + ++ +S + +L
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQ-RGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M++ G D +YT ++ ++ A ++ EM P V+YTA + +++
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ AT + + M + G PN TY VL+ L + + A E+ M E G+ P+
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 212 LIEKCCKAGETRTIILILRYMKE 234
+I+ CK G T + + M E
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIE 628
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 172/480 (35%), Gaps = 97/480 (20%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M + F + +S+S G F Y+ +L +++ + M +G+ + + Y
Sbjct: 161 MARTMSFLDMLSQS-GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYN 219
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTI----------------------------- 136
+V++ L G+V A I +++ E P
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279
Query: 137 ------VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
V+Y+ + L + RV EA D+ +EMI G+ P +T T + L G YE+A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP--VFKEAL 248
+F M+ G +P+ LI C +G + I + M + + +P V AL
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGV---FPNTVTYNAL 396
Query: 249 QTFKVADENDSLLWQV-----HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
V + + V SP ++ N+ + +G ++ K
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI--------------KGYCILGDPK 442
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
K ++ ++++L + + +TII+ CD AL + + +Y
Sbjct: 443 KAMLVMNNML----QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI K++ + EM G L P
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDG-----------------------------LCPN 529
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ TA LI Y D A + + M R G P++ T+NVL+ GL K S AE
Sbjct: 530 EVTYTA----LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +G+ D Y S++ L +VD A+ +++ M + C + Y + L R
Sbjct: 790 MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 849
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
KEA ++ M+ R P+ VL++ L+R G + +E M+ P
Sbjct: 850 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 125/529 (23%), Positives = 208/529 (39%), Gaps = 76/529 (14%)
Query: 3 DTIS--NVYKIL-KYSTWDSAQDLLKNLPIKWDSYTVNQV--------LKTHPPMEKAWL 51
DTIS V K L + S A DLL + K + N V L + KA
Sbjct: 189 DTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACN 248
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
F+ + + +G D TYT+++D +A+ + + V M G + VTY ++H
Sbjct: 249 LFHEMMQ-QGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGY 307
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
S +G ++ EM + P IV+ +YM L + + KEA + + M +G PN
Sbjct: 308 SISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNL 367
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
TY+VL+ G + + L +F+ M+ G+ D+ NI+I+ K G +LI
Sbjct: 368 VTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQ 427
Query: 232 MKENRL---ALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
M+E + A Y + A ++AD D + PE I +
Sbjct: 428 MQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH----------- 476
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV-ISTIIEVNCDHRRRDGALL 346
S+ QG + NLV L+S +M + I + V ++II C R A
Sbjct: 477 ---SLIQGFCM----HGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHD 529
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
F++ + + + + +LI + K +++ M AG
Sbjct: 530 IFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAG---------------- 573
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ P+ +Y LI Y G D L ++ M KG+ P+ T+
Sbjct: 574 -------------IEPD----VVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITY 616
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGG 515
++L GL GR A+ E + + M+ C ++ GG
Sbjct: 617 GIILHGLFNDGRTVGAKKMCHE--------MIESGTTMDISTCGIILGG 657
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ +++D +G +I V + M GI D V+Y +++ G +D + ++
Sbjct: 542 DVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILF 601
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM K PT ++Y + LF + R A + EMI+ G + T +++ L R
Sbjct: 602 GEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+EA+ +F K+ V+ + A N +I+
Sbjct: 662 NCDDEAIAMFKKLGAMNVKFNIAIINTMID 691
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 39/238 (16%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHP---PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D + ++ + D T N ++ + +EKA+ + + S G D +Y T++D +
Sbjct: 532 DFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMI-SAGIEPDVVSYNTLIDGYCR 590
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-------KLKE 131
RI +F M KG+ +TY ++H L N G GA + EM +
Sbjct: 591 NGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650
Query: 132 C-------------------YPTIVSYTAYMKILFLNDRV---------KEATDVYKEMI 163
C + + + I +N + +EA +++ +
Sbjct: 651 CGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSIS 710
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GL PN TY V+++ L++ G EEA +FS M+++G P N +I + GE
Sbjct: 711 ATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGE 768
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++++ + R+ +F+ + G D +T+ S++ G ++ A + + M
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMI 570
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +VSY + N R+ + ++ EM+ +G+ P TY +++ L G+
Sbjct: 571 SAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTV 630
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCK 218
A ++ +M E+G D + C I++ C+
Sbjct: 631 GAKKMCHEMIESGTTMDISTCGIILGGLCR 660
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 72/379 (18%), Positives = 139/379 (36%), Gaps = 101/379 (26%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
LP C TY +LM+ R + +F + + G++ D +IL+ KC
Sbjct: 116 LPTVC-TYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILL-KC---------- 163
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS--PEFISDNDAVEFVTT 284
L K +D+ +LL P+ P+ IS N V+ +
Sbjct: 164 ---------------------LYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCE 202
Query: 285 DIEGPLSIDQGLVLILLKKK-----NLVAIDSLLSGI----------------MDKSIQL 323
D ++D L+ ++KK N+V ++++ G+ M + +
Sbjct: 203 DSRSQRALD--LLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVP 260
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI---------------- 367
D ++II+ C R D A L + + Y +I
Sbjct: 261 DVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMF 320
Query: 368 ------GIL---IKLNTF----------PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
G++ + N++ + AE + M GH + ++L+H +
Sbjct: 321 REMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATE 380
Query: 409 RRPVPAAKIFSLLP-----EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
V +F+ + DQ+ + +I Y G D+ + I+ M +G+ P
Sbjct: 381 GCFVDMLNLFNSMEGNGIVADQR---VFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDA 437
Query: 464 GTFNVLLAGLEKLGRVSDA 482
T+ +++A ++GR++DA
Sbjct: 438 CTYGIVIAAFSRMGRLADA 456
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 206/510 (40%), Gaps = 35/510 (6%)
Query: 20 AQDLLKNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
A D P SY +N +L+ ++ A+ F+ + +G + D TY +++
Sbjct: 191 ADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQM-LDQGLSPDVVTYNSIISALS 249
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+A+ + V M + G + +T+ S++H ++G + A+ +++ M P +
Sbjct: 250 KARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVF 309
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y M L N R EA ++ M++RG PN TY L+ G + + M
Sbjct: 310 TYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMM 369
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEAL-QTFKV 253
G+QPD NILI K G+ +L+ M+ L + Y + +AL KV
Sbjct: 370 VRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKV 429
Query: 254 ADENDSLLWQVHPQFSPEFI-----------------SDNDAVEFVTTDIEGPLSIDQGL 296
D + +P+ + ++ AVE + I P +I
Sbjct: 430 DDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGI-CPNNIFFNT 488
Query: 297 VLILLKKKNLVAIDSLLSGIMDK-SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+L L K+ +VA + +M + +Q D +T+I+ C H + D A E V
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG 548
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y +I K + +M G + G+ + ++ L ARR A
Sbjct: 549 VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAK 608
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+++ + + + TY ++ D AL+I++ + H TFN+++ L
Sbjct: 609 ELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDAL 668
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
K GR E K + A L++ VP
Sbjct: 669 LKGGR-------HDEAKDLFASLLARGLVP 691
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 7/228 (3%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A LL+ + +K + T N ++ + +E A+ F ++ S+G N TY+T
Sbjct: 535 DEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMA-SKGVNPGIVTYST 593
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L +A+R ++ K ++ M + GI D TY ++ L D A+ I++ + L +
Sbjct: 594 ILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLID 653
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+ ++ + L R EA D++ ++ RGL PN TY ++M+ L+ G EE
Sbjct: 654 FHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELD 713
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++F +++ G + N L+ K + GE R + L + EN +L
Sbjct: 714 DLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSL 761
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 163/409 (39%), Gaps = 59/409 (14%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV-YK 160
+TY+ V+ S G +D A + ++++ +K L R EA D+ +
Sbjct: 92 ITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALR 151
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA-----GVQPDKAACNILIEK 215
M G PN ++YT+L++ L + ++AL + M A G PD + N +I
Sbjct: 152 RMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVING 211
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
+ G +L Y +F D +L Q SP+ ++
Sbjct: 212 LLREGR--------------QLDTAYHLF-------------DQMLDQ---GLSPDVVTY 241
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N + + + ++D+ V+++ KN G M I +S ++
Sbjct: 242 NS----IISALSKARAMDKAAVVLVRMVKN---------GAMPNRITHNS-----LLHGY 283
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C + + A+ F+ + + + Y L+G L K + +I + M K GH
Sbjct: 284 CSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNS 343
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKT 453
L+H + V + ++ + Q + LIG Y G D A+ ++
Sbjct: 344 ATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSK 403
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
M R+G++P T+ +++ L +G+V DA + + ++ L+ DAV
Sbjct: 404 MRRQGLNPDTVTYGIVMDALCMVGKVDDA---MAQFGRLISEGLTPDAV 449
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 178/435 (40%), Gaps = 48/435 (11%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
AW +N ++RS G + +T M++ + +I +K M++KGI D VTY +++
Sbjct: 169 AWEVYNEIARS-GIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLI 227
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ G + A + M K PT+ +Y A + L R A V+ EM+ GL
Sbjct: 228 NAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLS 287
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ TY L+ R + EA +IFS M GV PD + + LI + G ++
Sbjct: 288 PDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMY 347
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
R MK + L V + T + + + + + + A++ V +
Sbjct: 348 FRDMKTSGL-----VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYN--- 399
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+I GL KKK L ++L ++++ + D +T+I +C AL F
Sbjct: 400 --TILNGLC----KKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLF 453
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ ++ + Y LI K K E+ EM
Sbjct: 454 GIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMI--------------------- 492
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
+ KIF P +Y L+ Y + G +A +++ M RKGI P+L T N
Sbjct: 493 -----SRKIF---PNH----ISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540
Query: 469 LLAGLEKLGRVSDAE 483
++ G + G +S A+
Sbjct: 541 VIKGYCRSGDLSKAD 555
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 108/233 (46%), Gaps = 3/233 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M KA F +++ + D TY ++D F + + ++ M + I + ++Y
Sbjct: 446 MGKALSLFGIMTQ-KNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYA 504
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ N G V A +W+EM K PT+V+ +K + + +A + +MI
Sbjct: 505 ILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISE 564
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ TY L+ V+ ++A + +KM+ G+QPD N+++ C+ G +
Sbjct: 565 GVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEA 624
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDND 277
LILR M E + + + + V+ +N ++ H + F+ D+D
Sbjct: 625 ELILRKMIERGIDPDRSTYTTLINGY-VSQDNLKEAFRFHDEMLQRGFVPDDD 676
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/430 (20%), Positives = 164/430 (38%), Gaps = 51/430 (11%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+S S D + ++ + +A++++ F++++ KG + S++ L G
Sbjct: 105 ISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMG 164
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
VD A ++ E+ + + + L + ++ + +M Q+G+ + TY
Sbjct: 165 WVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYN 224
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ R G EA E+ + M G++P N +I CK G RY++
Sbjct: 225 TLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKG---------RYVRAK 275
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
VF E L SP D + T +E
Sbjct: 276 ------GVFNEMLSI----------------GLSP------DTTTYNTLLVES------- 300
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ N + + S ++ + + D S++I V+ + D AL+ F
Sbjct: 301 -----CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L + Y LI + + EI ++M + G +L V +++ L + A
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415
Query: 416 KIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+F + E T+T LI + G+ KAL ++ M +K I P + T+N+L+ G
Sbjct: 416 ALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGF 475
Query: 474 EKLGRVSDAE 483
K + A
Sbjct: 476 CKTTEMEKAN 485
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 92/211 (43%), Gaps = 36/211 (17%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV--- 102
+++A ++F + ++ G D YT +++ + +S + + M E+G +D V
Sbjct: 341 LDQALMYFRDM-KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYN 399
Query: 103 --------------------------------TYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T+T+++H G++ A++++ M K
Sbjct: 400 TILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQK 459
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P IV+Y + +++A +++ EMI R + PN +Y +L+ G EA
Sbjct: 460 NIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEA 519
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ +M G++P CN +I+ C++G+
Sbjct: 520 FRLWDEMIRKGIKPTLVTCNTVIKGYCRSGD 550
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGI-MDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
LS Q L+L ++++ + ++ + S I M + +D+ V +I R+ + F
Sbjct: 79 LSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTF 138
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ + + A +L+G L+K+ E+ E+ ++G L VY ++++ L
Sbjct: 139 KILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKD 198
Query: 409 RRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+ + K F + E + A TY LI Y G +A ++ +M KG+ P+L T
Sbjct: 199 HK-IDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFT 257
Query: 466 FNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDA 501
+N ++ GL K GR A+ E SI LS D
Sbjct: 258 YNAVINGLCKKGRYVRAKGVFNEMLSI---GLSPDT 290
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 186/469 (39%), Gaps = 90/469 (19%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A F+ + RGF D TY +++ F +A ++ + + + M + + D VTY
Sbjct: 136 LDEALKIFDGAVK-RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYN 194
Query: 106 SVMHWLSNAGDVD---------------------------------GAVNIWEEMKLKEC 132
S+++ L G VD A + E+M L C
Sbjct: 195 SLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGC 254
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P IVSY A + L V EA ++ ++++G P TY +L++ L++ + EA E
Sbjct: 255 KPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFE 314
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+FS + + G++PD + I+ CKAG +L+L+ M E
Sbjct: 315 LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV-------------- 360
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
P+ +S N + L K+K + + L
Sbjct: 361 -----------------PDVVSHNAVING------------------LCKEKRVDEAEVL 385
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
LSG+ K ++ +T+I C + A+ F+ +K + Y L+ L K
Sbjct: 386 LSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK 445
Query: 373 LNTFPKVAEIV---EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
++ E + + M + G V + LI LG A + A ++ + E + C
Sbjct: 446 ARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM-EAKGCIP 504
Query: 430 ---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
TY +LI D+AL+++ M KG P T+ +++ L K
Sbjct: 505 NVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCK 553
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 196/450 (43%), Gaps = 31/450 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R ++ D +T +L ++ +I E + KG+ D T+ + L A +
Sbjct: 10 RIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGD 68
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ M+ +P ++Y A + L R+ +A +Y+ MI+ G P+ TY L+
Sbjct: 69 AQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLH 128
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ GK +EAL+IF + G PD N LI CKA + IL+ M L
Sbjct: 129 GFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y L DE L+ V FSP I+ + + + ++ S Q L
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARMLI--VDKGFSPNVITYSTLISGLCRELRRLESARQLL 246
Query: 297 VLILLK--KKNLVAIDSLLSGI-----MDKSIQLDSAVI-----------STIIEVNCDH 338
++L K ++V+ ++L+ G+ + ++++L +V+ + +I+
Sbjct: 247 EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R + A F VK L + Y I L K ++++M + G V
Sbjct: 307 DRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSH 366
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMC 455
+I+ L +R A + S + E + C+ ++ LI AG KA+ +K M
Sbjct: 367 NAVINGLCKEKRVDEAEVLLSGM-EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425
Query: 456 RKGIHPSLGTFNVLLAGLEKL---GRVSDA 482
++G+ P++ T+N+L+ GL K GR+ +A
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEA 455
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 160/363 (44%), Gaps = 32/363 (8%)
Query: 18 DSAQDLLKNLPI---KWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
+SA+ LL+ + + K D + N + L + +A F V R +G+ + TY
Sbjct: 240 ESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLR-QGYEPEVPTYNI 298
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++D + R++ +F + + G+ DA+TYT + L AG V+ A+ + ++M K
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C P +VS+ A + L RV EA + M +G PN ++ L+ RAGK+++A+
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKA---GETRTIILILRYMKE-NRL--ALRYPVFK 245
F +M + GV+P NIL++ CKA G + I + M E R+ + Y
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478
Query: 246 EALQTFKVADENDSLLWQVHPQFS-PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ L D+ LL + + P + N + + + G +D+ L
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI----SGLCGLDKVDEAL-------- 526
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
L +++K D+ TII C D AL F+ S++ + Y
Sbjct: 527 ------ELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYF 580
Query: 365 ALI 367
+LI
Sbjct: 581 SLI 583
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 188/454 (41%), Gaps = 34/454 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R GF +R TY +L R+S + ++E M + G + D VTY +++H G +
Sbjct: 77 RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKL 136
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I++ + P +V+Y A + D++ EA + + M+ L P+ TY L
Sbjct: 137 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSL 196
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA----GETRTII--LILRY 231
+ L + G+ +EA + + + G P+ + LI C+ R ++ ++L
Sbjct: 197 VNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNG 253
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTD--IEG 288
K + ++ Y L + E L V Q + PE + N ++ + + +
Sbjct: 254 CKPDIVS--YNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNE 311
Query: 289 PLSIDQGLVLILLKKKNL---VAIDSL------------LSGIMDKSIQLDSAVISTIIE 333
+ GLV L+ + V ID L L + +K D + +I
Sbjct: 312 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 371
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C +R D A + + ++ LI + + K +EM K G
Sbjct: 372 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431
Query: 394 GVYLGALLIHRLGSAR---RPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKAL 448
V +L+ L AR R A +F + E + TY+ALI AG D A
Sbjct: 432 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 491
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M KG P++ T+N L++GL L +V +A
Sbjct: 492 RLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEA 525
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAK---RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
RG TY ++D +A+ RI +F+ M EKG D VTY++++ L AG
Sbjct: 427 RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D A + M+ K C P + +Y + + L D+V EA +++ M+++G P+ TY
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
++ L + ++AL +F EAGV P LI+ C
Sbjct: 547 IISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLC 587
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R A F+ K R Y AL+ L + E M KAG+S V
Sbjct: 61 CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV 120
Query: 396 YLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALK 449
L+H + A KIF +P+ TY ALI + A D+A +
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPD----VVTYNALINGFCKADKLDEAQR 176
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
I + M + + P + T+N L+ GL K GRV +A +
Sbjct: 177 ILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARM 211
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 178/463 (38%), Gaps = 52/463 (11%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYT 70
+Y D+A+ L+ ++P+ D+YT +++ + + + RG TYT
Sbjct: 125 RYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYT 184
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L+ ++ V + M+ KG + VTY +++ + G VD A +
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P VSYT +K L R ++ +++ EM+++ PN T+ +L+ + R G E A
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+++ +M G + CNI+I CK G L M + + L+
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
A+ W+ + E + N VT + + IL +K +
Sbjct: 365 LCRAER-----WEDAKELLKEMVRKNCPPNEVTFNT---------FICILCQKGLIEQAT 410
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
L+ + + +++ + ++ C R D AL F YS+ N Y L+ L
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF-YSMPCKPNT--ITYTTLLTGL 467
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
AE++ EM + + V T
Sbjct: 468 CNAERLDAAAELLAEMLQKDCAPNV---------------------------------VT 494
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ L+ + G D+A+++ + M G P+L T+N LL G+
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 178/418 (42%), Gaps = 18/418 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y T++ + ++ + + + M + DA TYT ++ L + G V A+++
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 168
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M + C P++V+YT ++ + + +A +V EM +G PN TY V++ + R
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ ++A E +++ G QPD + +++ C A + + M E F
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
++ F + + QV Q S + N + + + + K+
Sbjct: 289 DMLVRFFCRGGMVERAI-QVLEQMSGHGCAANTTLCNIVINT-------------ICKQG 334
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ L+ + D+ +T+++ C R + A + V+ + +
Sbjct: 335 RVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
I IL + + ++E+M++ G + + L++ R A ++F +P
Sbjct: 395 TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK 454
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T TYT L+ +A D A ++ M +K P++ TFNVL++ + G + +A
Sbjct: 455 PN-TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEA 511
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 164/433 (37%), Gaps = 89/433 (20%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F N +S S GF D +YTT+L AKR ++ +F M EK + VT+
Sbjct: 231 VDDAREFLNRLS-SYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 106 SVMHWLSNAGDVDGAVNIWEEMK------------------LKE---------------- 131
++ + G V+ A+ + E+M K+
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 132 -CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P +SYT +K L +R ++A ++ KEM+++ PPN T+ + L + G E+A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM--KEN------------- 235
+ +M E G + + N L+ C G + + + M K N
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCN 469
Query: 236 --RLALRYPVFKEALQ--------TFKV----------ADENDSLLWQVHPQ-FSPEFIS 274
RL + E LQ TF V DE L+ Q+ +P I+
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 529
Query: 275 DNDAVEFVTTDI--EGPLSIDQGLVL---------------ILLKKKNLVAIDSLLSGIM 317
N ++ +T D E L + GLV +L ++ + + +
Sbjct: 530 YNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 589
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
D ++ + + + I+ C DGA+ F Y V Y+ LI L +
Sbjct: 590 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 649
Query: 378 KVAEIVEEMTKAG 390
+ +++ E+ G
Sbjct: 650 ETRDLLRELCSRG 662
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 24/256 (9%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEK----AWLFFNWVSRSRGFNHDRFTYTTML 73
DSA +L ++P K ++ T +L E+ A L + + N T+ ++
Sbjct: 442 DSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV--VTFNVLV 499
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
F + + + E M E G + +TY +++ ++N + + A+ + +
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVS 559
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P IV+Y++ + +L DRV+EA ++ + G+ P Y ++ L + + A++
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 619
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
F+ M G P++ LIE A E ++KE R LR + L
Sbjct: 620 FAYMVSNGCMPNELTYITLIEG--LANED--------FLKETRDLLRELCSRGVL----- 664
Query: 254 ADENDSLLWQVHPQFS 269
N +LL + P+FS
Sbjct: 665 ---NKNLLEEWRPKFS 677
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
Q TYT L+ + +A+++ M KG P++ T+NV++ G+ + GRV DA
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 485 Y--RKEKKSIQADALSKDAV 502
+ R Q D +S V
Sbjct: 237 FLNRLSSYGFQPDTVSYTTV 256
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/469 (20%), Positives = 190/469 (40%), Gaps = 63/469 (13%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
P + ++ QV ++ L + + +++ F D T+ ++D +A ++
Sbjct: 63 PTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAK-FVPDHTTFNILIDSLAKADQVEEACN 121
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF M + ++ D TYT ++ L G +D + ++E M + C P + +Y + M
Sbjct: 122 VFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFG 181
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
RV EA D++++M+Q+GL P+ TY +L++ + G+ E A + K + ++
Sbjct: 182 SAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSF---TNEV 238
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQ-TFKVADENDSLLWQ 263
N L+ + G+ + ++ + MK L L Y + E L +V D +WQ
Sbjct: 239 TYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVED-----VWQ 293
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
++ + ++D I+
Sbjct: 294 LYLE------------------------------------------------MVDNDIKY 305
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D I+ +++ R + A F+ LN + Y LI L + ++
Sbjct: 306 DIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALL 365
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSA 441
EM + G + + LI G A ++F + E +Y++LI + A
Sbjct: 366 LEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKA 425
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
G D A+ +++ M +G P+ T+N+L+ L + GR A Y +E +
Sbjct: 426 GRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMR 474
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
+D T +LD +A R+ + +F+ M+ KG+N D VTY +++ L AG +D A +
Sbjct: 305 YDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGAL 364
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
EM+ C P I++Y + + AT ++ EM +RG+ PN +Y+ L+E +
Sbjct: 365 LLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGK 424
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
AG+ + A+ +F +M+ G P+ N+LI+ +AG + LR M++
Sbjct: 425 AGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD--------- 475
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPE 271
Q KV SLL ++ PQ+ E
Sbjct: 476 --AGCQMGKVT---KSLLVRIPPQYMEE 498
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 5/200 (2%)
Query: 17 WDSAQDLLKNLPIKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
W +++ N IK+D T+N VL +E A+ F + + +G N D TY ++
Sbjct: 292 WQLYLEMVDN-DIKYDIVTINNVLDCLSKAGRVEAAFELFQDM-KFKGLNADTVTYNILI 349
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ G A ++ + + M+E G + +TY +++ ++ A ++ EMK +
Sbjct: 350 NGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVA 409
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P +VSY++ ++ R A +++EM G PPN TY +L++ L+RAG++ A+E
Sbjct: 410 PNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEY 469
Query: 194 FSKMQEAGVQPDKAACNILI 213
+M++AG Q K ++L+
Sbjct: 470 LREMRDAGCQMGKVTKSLLV 489
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 182/450 (40%), Gaps = 59/450 (13%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
TVN ++ + + + ++ + + GF D+ TY T ++ + + V ++M
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 220
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
++G + D TY V++ L G ++ A I +M + C P I ++ + L +R+
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA D+ +++ +G+ P+ YT+ +L+ L + G AL +F +M+ +G PD+ N L
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340
Query: 213 IEKCCKAGETRTIILILRYMKEN---RLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
I+ C G+ + +L+ M+ R + Y + L +E + + Q+
Sbjct: 341 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM----- 395
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
D++G +N + ++L+ G+
Sbjct: 396 ---------------DLQGI-------------SRNAITFNTLIDGL------------- 414
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C ++ D A + L Y +++ K K A+I+E MT
Sbjct: 415 ------CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 468
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKA 447
G + V LI+ L A R A K+ + + Y ++ F + A
Sbjct: 469 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 528
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L +++ M G P T+ ++ GL + G
Sbjct: 529 LSLFREMAEVGEPPDALTYKIVFRGLCRGG 558
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 151/398 (37%), Gaps = 67/398 (16%)
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
GI D V Y +++ L + +++ EM + P +V++ MK L +V+ A
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ +EM RG+ P+ T+T LM+ V G E AL + ++M E G K N+LI
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168
Query: 216 CCKAGETRTIILILRYMKENRL------ALRYPVFKEAL-QTFKVADENDSLLWQVHPQF 268
CK G L Y+++ + Y F L Q V + V
Sbjct: 169 YCKLGRVED---ALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
P+ + N V L K L +L+ ++D+ D
Sbjct: 226 DPDVFTYNIVVN------------------CLCKNGQLEEAKGILNQMVDRGCLPDITTF 267
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+T+I C R + AL ++ ++T
Sbjct: 268 NTLIAALCTGNRLEEAL-----------------------------------DLARQVTV 292
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSAD 445
G S VY +LI+ L P A ++F + ++ CT TY LI S G
Sbjct: 293 KGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLG 351
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
KAL + K M G S T+N ++ GL K R+ +AE
Sbjct: 352 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 389
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 200/508 (39%), Gaps = 54/508 (10%)
Query: 17 WDSAQDLLKN-----LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTY 69
+D A DL+ N I+ D+ N +L K L + S +RG D T+
Sbjct: 33 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 92
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T++ A ++ + + E M +G+ D T+T++M G ++ A+ + M
Sbjct: 93 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 152
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
C T V+ + RV++A ++ I G P+ TY + L +
Sbjct: 153 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 212
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK---E 246
AL++ M + G PD NI++ CK G+ IL M + F
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272
Query: 247 ALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK-K 304
AL T +E L QV + SP+ + N + + D L L L ++ K
Sbjct: 273 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK------VGDPHLALRLFEEMK 326
Query: 305 NL----------VAIDSLLS-GIMDKSIQL-----------DSAVISTIIEVNCDHRRRD 342
N ID+L S G + K++ L + +TII+ C R +
Sbjct: 327 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386
Query: 343 GALLAFEYSVKMDL-NLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLG 398
A F+ +MDL + R A + LI L K E++ +M G +
Sbjct: 387 EAEEVFD---QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 443
Query: 399 ALLIH--RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTM 454
++L H + G ++ AA I + + + TY LI AG ALK+ + M
Sbjct: 444 SILTHYCKQGDIKK---AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KG+ P+ +N +L L + + DA
Sbjct: 501 RIKGMRPTPKAYNPVLQSLFRRNNIRDA 528
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 7/258 (2%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHDRFTYTTMLDIFGEAKR 81
+KN D T N ++ + K + + S G TY T++D + R
Sbjct: 325 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 384
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
I + VF+ M +GI+ +A+T+ +++ L +D A + +M + P ++Y +
Sbjct: 385 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 444
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ +K+A D+ + M G + TY L+ L +AG+ + AL++ M+ G
Sbjct: 445 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 504
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMK---ENRLALRYPVFKEAL--QTFKVADE 256
++P A N +++ + R + + R M E AL Y + L + +
Sbjct: 505 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEA 564
Query: 257 NDSLLWQVHPQFSPEFIS 274
D +L V F PEF S
Sbjct: 565 FDFMLEMVDKGFIPEFSS 582
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
T+T L+ + GS + AL++ M G + T NVL+ G KLGRV DA Y ++
Sbjct: 125 TTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ 184
Query: 489 KKSIQADALSKDAV 502
+ AD D +
Sbjct: 185 EI---ADGFEPDQI 195
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 199/493 (40%), Gaps = 96/493 (19%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIF-------------------------------- 76
A FF+W G+ HD +Y +LDI
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69
Query: 77 -GEAKRISSMKYV--FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
G K +M+ + + E + D + ++H L G+ D AV ++E M+
Sbjct: 70 RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVK 129
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG--LPPNCYTYTVLMEYLVRAGKYEEAL 191
P IV+Y + L + +++A ++ +EMI++G P+ TY L+ RA + EA
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC 189
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
KM+ AG+ PD CNIL+ CK G+ + IL MK L PV
Sbjct: 190 AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK-----LAGPV-------- 236
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
P+ I+ N + + + G + ++ + +LV ++
Sbjct: 237 ------------------PDVITYNSIIHALC--VAGKVVEAAEILKTMSCSPDLVTFNT 276
Query: 312 LL-----SGIMDKSIQLDSA---------VISTIIEVN--CDHRRRDGALLAFEYSVKMD 355
LL +G++ +++++ VI+ I VN C + A E V+
Sbjct: 277 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 336
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RLGS---AR 409
+ AY +L+ L K + ++V+EM+ G GV + + L+ R G+ AR
Sbjct: 337 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAR 396
Query: 410 RPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
+ +++P TY ++G GS KA+ + + +G P + T+N L
Sbjct: 397 EILAEMVSINMVPP----LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452
Query: 470 LAGLEKLGRVSDA 482
+ GL K RV +A
Sbjct: 453 IDGLCKANRVREA 465
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 194/485 (40%), Gaps = 63/485 (12%)
Query: 8 VYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRG 61
++ + K D A L +N+ +K + T N V L +EKA + R G
Sbjct: 104 IHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGG 163
Query: 62 FNH-DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
+ D TY T+++ F A RI E M+ GIN D +T ++ + GDV+ A
Sbjct: 164 KSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEA 223
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I + MKL P +++Y + + L + +V EA ++ K M P+ T+ L++
Sbjct: 224 LEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDG 280
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AG ALE+ +M + PD IL+ C+ G+ + +L +
Sbjct: 281 FCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI-------- 332
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
V + P+ I+ V+ + E I++ L+
Sbjct: 333 -----------------------VRQGYIPDVIAYTSLVDGLCKSGE----IEEAHKLV- 364
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+++ +G++ + S+++S H+ R+ +LA S+ M L
Sbjct: 365 ----KEMSVRGCRTGVV-----MYSSLVSGYCRAGNVHKARE--ILAEMVSINMVPPL-- 411
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y ++G LIK + K ++ ++ G+ V LI L A R A +
Sbjct: 412 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE 471
Query: 421 LPEDQKCTATYTALIGVYFS---AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ + C L V F G D A + M RK P++ + L+ GL K
Sbjct: 472 MAS-RGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSD 530
Query: 478 RVSDA 482
R+ DA
Sbjct: 531 RMDDA 535
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG+ D TY T++D +A R+ + + M +G + VT SV+ L G VD
Sbjct: 439 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVD 498
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EM K P +V YT+ + L +DR+ +A V M +G+ + + Y L+
Sbjct: 499 DAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLI 558
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ G+ EA+ ++ +M G PD + L E
Sbjct: 559 VSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 594
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG Y++++ + A + + + M + TY V+ L G +
Sbjct: 370 RGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 429
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV++ ++ + P +V+Y + L +RV+EA D+ EM RG PN T ++
Sbjct: 430 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVF 489
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L R G+ ++A + +M P+ LI+ CK+ ++L M+ +AL
Sbjct: 490 GLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVAL 549
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY +L + IS + + +G D VTY +++ L A V A ++ +E
Sbjct: 412 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE 471
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + C+P V+ + + L RV +A + EM ++ PN YT L++ L ++ +
Sbjct: 472 MASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDR 531
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILI 213
++A + M+ GV D A LI
Sbjct: 532 MDDACMVLDAMRGQGVALDDFAYRKLI 558
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 204/489 (41%), Gaps = 67/489 (13%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF 76
A +L+ ++P+ D+YT N VLK EKA + R+ + + T+ T + F
Sbjct: 197 ALNLIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRN-NCHPNEVTFATQIRSF 255
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
+ + + E M G D V Y+++++ S G VD A+ + M C P
Sbjct: 256 CQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNT 312
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
V Y A +K L + +R K+ ++ EM+++ PPN T+++L L + G + A+E+ +
Sbjct: 313 VCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQ 372
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
MQ+ G +PD N LI + G +++L
Sbjct: 373 MQKYGCRPDVVIYNTLINYFSEQGRVDDALMLL--------------------------- 405
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI 316
DS+L +P+ IS N A++ L + + ++ L++ +
Sbjct: 406 -DSML------CNPDTISFNAALK------------------ALCRTERWYDVEELIAQM 440
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+ + L + +I+ C H + A+ FE K + Y +LI +
Sbjct: 441 LREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLV 500
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTA 433
E+ + M ++ ++ L A R A ++ + + + C T+
Sbjct: 501 ESAIELFQSMPCKPD---IFSYNAVLKGLCRAARWEDAGELIANMAR-KDCPPNEITFNI 556
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
LI G AD+A++++K M G P + T+N L+ G + GR+ DA + S +
Sbjct: 557 LINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDA-LNLLSTMSCK 615
Query: 494 ADALSKDAV 502
DA+S ++
Sbjct: 616 PDAISYNST 624
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
+SA +L +++P K D ++ N VLK E A ++R + + T+ +++
Sbjct: 501 ESAIELFQSMPCKPDIFSYNAVLKGLCRAARWEDAGELIANMAR-KDCPPNEITFNILIN 559
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ VF+ M E G D TY ++++ S G +D A+N+ M C P
Sbjct: 560 SLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMS---CKP 616
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
+SY + +K L +R KEA ++ EM+++ PPN T+
Sbjct: 617 DAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 147/394 (37%), Gaps = 77/394 (19%)
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
N TYT L+ R+G+ +AL + + M V PD N +++ C A + ++
Sbjct: 177 NVVTYTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWEKAEELM 233
Query: 230 RYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEFVT--T 284
M N F +++F + D LL ++ P + D V + T
Sbjct: 234 EEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERM-----PRYGCTPDVVIYSTLVN 288
Query: 285 DIEGPLSIDQGLVLI--LLKKKNLVAIDSLLSGI----------------MDKSIQLDSA 326
+D LVL+ +L K N V ++ L G+ + K + A
Sbjct: 289 GFSEQGRVDDALVLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEA 348
Query: 327 VISTIIEVNCDHRRRDGALLAFE----YSVKMDL-------------------------- 356
S + C H D A+ E Y + D+
Sbjct: 349 TFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSM 408
Query: 357 --NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
N + ++ A + L + + V E++ +M + L +LI L A
Sbjct: 409 LCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHA 468
Query: 415 AKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
++F +P+ +CT TY++LI + G + A++++++M P + ++N +L
Sbjct: 469 IEVFEQMPK-YRCTPDIVTYSSLINGFSEQGLVESAIELFQSM---PCKPDIFSYNAVLK 524
Query: 472 GLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
GL + R DA + A+ KD P E
Sbjct: 525 GLCRAARWEDA-------GELIANMARKDCPPNE 551
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 101/178 (56%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N D FT++ ++D F + ++ + +++ M ++ I+ VTY+S+++ +D
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E M K C+P +V+Y +K RV+E +V++EM QRGL N TY +L++
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L +AG + A EIF +M GV P+ N L++ CK G+ +++ Y++ +++
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 292
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 1/193 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F ++ F D TY T++ F + KR+ VF M ++G+ + V
Sbjct: 169 HDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 227
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY ++ L AGD D A I++EM P I++Y + L N ++++A V++ +
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ + P YTY +++E + +AGK E+ ++F + GV+PD A N +I C+ G
Sbjct: 288 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 347
Query: 223 RTIILILRYMKEN 235
+ + MKE+
Sbjct: 348 EEADALFKEMKED 360
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I D +T ++ +K +E L+ V RS +
Sbjct: 96 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS--ID 153
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
TY+++++ F R+ K +FE M K D VTY +++ V+ + +
Sbjct: 154 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 213
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+Y ++ LF A +++KEM+ G+PPN TY L++ L +
Sbjct: 214 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 273
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+A+ +F +Q + ++P NI+IE CKAG+
Sbjct: 274 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 155/401 (38%), Gaps = 51/401 (12%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M KG D VTY V++ L GD D A N+ +M+ + P ++ Y + L
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ +A +++KEM +G+ PN TY+ L+ L G++ +A + S M E + PD +
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
LI+ ++KE +L ++ K+ DE V P
Sbjct: 127 LIDA---------------FVKEGKL----------VEAEKLYDE------MVKRSIDPS 155
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
++ ++ I G D+ L + ++ K D +T+
Sbjct: 156 IVT-------YSSLINGFCMHDR-----------LDEAKQMFEFMVSKHCFPDVVTYNTL 197
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ C ++R + + F + L Y LI L + EI +EM G
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
+ L+ L + A +F L + TY +I AG +
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
++ + KG+ P + +N +++G + G +A+ KE K
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 358
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ L + M+ A F + ++G + TY++++ R S + M E
Sbjct: 56 TIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 114
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+ IN D T+++++ G + A +++EM + P+IV+Y++ + ++DR+ E
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A +++ M+ + P+ TY L++ + + EE +E+F +M + G+ + NILI+
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234
Query: 215 KCCKAGETRTIILILRYM 232
+AG+ I + M
Sbjct: 235 GLFQAGDCDMAQEIFKEM 252
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 140/360 (38%), Gaps = 51/360 (14%)
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M K C P +V+Y + L A ++ +M Q L P Y +++ L +
Sbjct: 5 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 64
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
++AL +F +M+ G++P+ + LI C G R+ +RL
Sbjct: 65 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG---------RWSDASRLL------ 109
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+D + +++P D F L+ +K+
Sbjct: 110 ------------SDMIERKINP----------DVFTF------------SALIDAFVKEG 135
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
LV + L ++ +SI S++I C H R D A FE+ V + Y
Sbjct: 136 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 195
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
LI K + E+ EM++ G +LI L A A +IF + D
Sbjct: 196 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 255
Query: 425 Q--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY L+ G +KA+ +++ + R + P++ T+N+++ G+ K G+V D
Sbjct: 256 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 315
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 163/420 (38%), Gaps = 83/420 (19%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T++D + K + +F+ M+ KGI + VTY+S++ L N G A + +M
Sbjct: 54 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 113
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++ P + +++A + ++ EA +Y EM++R + P+ TY+ L+ + +
Sbjct: 114 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 173
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA ++F M PD N LI+ CK + + R M + L + +
Sbjct: 174 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 233
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
Q A + D + + E +SD N++
Sbjct: 234 QGLFQAGDCD-----MAQEIFKEMVSDG-------------------------VPPNIMT 263
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++LL G+ C + + + A++ FEY + +E T Y I
Sbjct: 264 YNTLLDGL-------------------CKNGKLEKAMVVFEYLQRS--KMEPTIYTYNI- 301
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
++E M KAG V G L L + + P+
Sbjct: 302 -------------MIEGMCKAGK---VEDGWDLFCNL----------SLKGVKPD----V 331
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-AGLEKLGRVSDAEIYRK 487
Y +I + GS ++A ++K M G P+ G +N L+ A L R + AE+ ++
Sbjct: 332 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE 391
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TY T+LD + ++ VFE +Q + TY ++ + AG V+
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +V+Y + +EA ++KEM + G PN Y L+
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G E + E+ +M+ G AG+ TI L+ + + RL
Sbjct: 374 RARLRDGDREASAELIKEMRSCGF----------------AGDASTIGLVTNMLHDGRL 416
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 117/316 (37%), Gaps = 61/316 (19%)
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+ + +M G QPD +++ CK G+T +L M++ +L
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL------------- 47
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
P V T I+G L K K++
Sbjct: 48 --------------EP-----------GVLIYNTIIDG-----------LCKYKHMDDAL 71
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+L + K I+ + S++I C++ R A ++ +N + + ALI
Sbjct: 72 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--- 427
+K + ++ +EM K + + LI+ R A ++F + + C
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS-KHCFPD 190
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
TY LI + ++ +++++ M ++G+ + T+N+L+ GL + G A+ K
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250
Query: 488 EKKSIQADALSKDAVP 503
E + D VP
Sbjct: 251 E--------MVSDGVP 258
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 121/234 (51%), Gaps = 9/234 (3%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPM----EKAWLFFNWVSRSRGFN 63
+ KY D A DL + IK D +T N ++ + + L + + R N
Sbjct: 266 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK--IN 323
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
+ T+ +++D F + ++ + +F+ M ++ I+ + VTY S+++ +D A I
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ M K+C P +V+Y +K RV+E ++++EM QRGL N TY L++ L +
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
AG + A +IF KM GV PD +IL++ CK G+ +++ Y++++++
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 187/480 (38%), Gaps = 84/480 (17%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ K+ S + ++NL I + YT + +L + L + + G+
Sbjct: 88 LSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGY 147
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T +++L+ + KRIS + + M E G D VT+ +++H L AV
Sbjct: 148 EPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 207
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ + M + C P + +Y + L + A + K+M + + N Y +++ L
Sbjct: 208 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLC 267
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ ++A ++F+KM+ G++PD N LI C G R+ +RL
Sbjct: 268 KYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYG---------RWSDASRL----- 313
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
L + + +P ++ N ++ K
Sbjct: 314 -----------------LSDMIERKINPNVVTFNSLID------------------AFAK 338
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+ L+ + L ++ +SI + +++I C H R D A F V D +
Sbjct: 339 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 398
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y LI K + E+ EM++ G +G+
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREMSQRG-------------LVGN--------------- 430
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T TY LI F AG D A KI+K M G+ P + T+++LL GL K G++ A
Sbjct: 431 -----TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 485
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I + T N ++ K +E LF + RS +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS--ID 358
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
+ TY ++++ F R+ + +F LM K D VTY +++ A V+ + +
Sbjct: 359 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMEL 418
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+Y ++ LF A ++K+M+ G+PP+ TY++L++ L +
Sbjct: 419 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 478
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+AL +F +Q++ ++P+ NI+IE CKAG+
Sbjct: 479 YGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 101/193 (52%), Gaps = 1/193 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F + S+ D TY T++ F +AKR+ +F M ++G+ + V
Sbjct: 374 HDRLDEAQQIFTLMV-SKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +++ L AGD D A I+++M P I++Y+ + L ++++A V++ +
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ + PN YTY +++E + +AGK E+ ++F + GV+P+ +I C+ G
Sbjct: 493 QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 552
Query: 223 RTIILILRYMKEN 235
+ R MKE+
Sbjct: 553 EEADALFREMKED 565
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 23/232 (9%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D T N ++K +E+ F +S+ RG + TY T++ +A + +
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKI 453
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ M G+ D +TY+ ++ L G ++ A+ ++E ++ + P I +Y ++ +
Sbjct: 454 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCK 513
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+V++ D++ + +G+ PN YT ++ R G EEA +F +M+E G PD
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 573
Query: 209 CNILI-------------------EKCCKAGETRTIILILRYMKENRLALRY 241
N LI C G+ TI +++ + + RL Y
Sbjct: 574 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 625
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 139/377 (36%), Gaps = 56/377 (14%)
Query: 151 RVKEATDVYKEMIQR-----------------------------------GLPPNCYTYT 175
++ +A ++ EM++ G+P N YTY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+L+ R + AL + KM + G +PD + L+ C + ++ M E
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV--EFVTTDIEGPLSID 293
+K TF +H F S+ A+ V + L
Sbjct: 181 G-------YKPDTVTFNTL---------IHGLFLHNKASEAVALIDRMVARGCQPDLFTY 224
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
+V L K+ ++ SLL + I+ + + +TII+ C ++ D A F
Sbjct: 225 GTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMET 284
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ + Y +LI L + + ++ +M + + V LI + +
Sbjct: 285 KGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIE 344
Query: 414 AAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
A K+F + + TY +LI + D+A +I+ M K P + T+N L+
Sbjct: 345 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIK 404
Query: 472 GLEKLGRVSDA-EIYRK 487
G K RV + E++R+
Sbjct: 405 GFCKAKRVEEGMELFRE 421
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 202/460 (43%), Gaps = 38/460 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++GF + +++ F +AK + S + E+M EKG + T+T ++ L A V
Sbjct: 177 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 236
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + E+M C P +V+Y+ + L +V +A ++++ M +R PPN T+ +L+
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 296
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L +A + EEA +++ +M+E G PD N LI+ CK+ + + + + E+ ++
Sbjct: 297 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 356
Query: 239 LRYPV-----FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV-EFVTTDIEGPLSI 292
V F ++AD V FSP+ + + E+ T +
Sbjct: 357 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 416
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIM-----DKSIQL-----------DSAVISTIIEVNC 336
+ + + ++L G+ +++IQL D+ + + ++E
Sbjct: 417 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 476
Query: 337 DHRRRDGALLAFEYSV-KMD--LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
+ + AL E + K D N +A AL+ L ++ +++ +M++ G +
Sbjct: 477 RASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAA 536
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKA 447
V L+ L +R A ++F + PE +T +I SA D A
Sbjct: 537 AVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPE----ISTVNVVISWLCSAAKVDDA 592
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
++ + M + G P + T N L+ G K GR A++ RK
Sbjct: 593 YELVQRMSKLGCCPDIETCNTLIGGYCKSGR---ADLARK 629
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 169/410 (41%), Gaps = 19/410 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
++FTY ++ F A + + E M+ G +AV +T++M L +AG V A+ +
Sbjct: 8 NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF 67
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M K+C P +++YTA + L + EA + +EMI RG P+ T++ L++ L +
Sbjct: 68 RAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCC-KAGETRTIILILRYMKENRLALRYPV 243
G E+A + + + G+ AA +I++ C K +L + +
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
F + F A + DS + E + + V V T +I L+ L K
Sbjct: 187 FNLVINGFCKAKDLDSAYKLL------EVMIEKGCVPNVFT-----FTI---LITGLCKA 232
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+ LL ++ + ST+I C + D A F+ + + +
Sbjct: 233 NRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTH 292
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI L K + ++ M + G + + LI L + + A ++F +PE
Sbjct: 293 NILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPE 352
Query: 424 DQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A TY+ L Y + G A +I+ + KG P L T+ L+
Sbjct: 353 SGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 204/490 (41%), Gaps = 32/490 (6%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQV---LKTHPPMEKAWLFFNWVSRSRG 61
V+ + K +D AQ +L+ + + D+ T + + L E+A+ V +
Sbjct: 85 VHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 144
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
N D T + + + + V ++ KG + + V++ A D+D A
Sbjct: 145 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAY 204
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ E M K C P + ++T + L +RV EA + ++M+ G PN TY+ ++ L
Sbjct: 205 KLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGL 264
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA--- 238
+ G+ ++A E+F M+ P+ NILI+ CKA + M+E A
Sbjct: 265 CKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDI 324
Query: 239 LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ Y + L ++F+V DE L+Q P+ +S +AV + +T G ++ +
Sbjct: 325 ITYNSLIDGLCKSFQV-DEAFQ-LFQTIPESG---VSAANAVTY-STLFHGYAALGR--- 375
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ + S ++DK D A +++I C R + E
Sbjct: 376 --------MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 427
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
A++G L + N + ++ + M G + + L++ + A + A +
Sbjct: 428 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAV 487
Query: 418 FSLL--PEDQK---CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ D+K ++ AL+ G D A ++ M +G ++ ++N LL+G
Sbjct: 488 LEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSG 547
Query: 473 LEKLGRVSDA 482
L +L R +A
Sbjct: 548 LSRLQRWDEA 557
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 165/384 (42%), Gaps = 19/384 (4%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY ++ S+AGD+D A+ + EEMK V +T MK L RV EA + ++ M
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 70
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ P+ TYT L+ L +AGK++EA + +M G PD + LI+ CK G
Sbjct: 71 -AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE 129
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+L + + + F+ +Q ++ ++ +S+ + + + + A F
Sbjct: 130 EQAFRVLEDVIQRGMGNSDAAFETIIQ--RLCNKYNSV------ELASKVLGVVIAKGFT 181
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
T + L I+ K K+L + LL +++K + + +I C R
Sbjct: 182 PTVLMFNLVING-----FCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 236
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A E V + Y +I L K E+ + M + V +LI
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 296
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L A+R A +++ + E C TY +LI + D+A ++++T+ G+
Sbjct: 297 DGLCKAKRIEEARQLYHRMRE-TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV 355
Query: 460 HPSLG-TFNVLLAGLEKLGRVSDA 482
+ T++ L G LGR++DA
Sbjct: 356 SAANAVTYSTLFHGYAALGRMADA 379
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM---QEKGINIDAVT 103
E+A F+ ++ +RG D Y +++ A + + V E + +++ N +
Sbjct: 447 ERAIQLFDSMA-ARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSA 505
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+++ L G D A + +M + + SY + L R EAT V++ M+
Sbjct: 506 VDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMV 565
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G P T V++ +L A K ++A E+ +M + G PD CN LI CK+G
Sbjct: 566 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRAD 625
Query: 224 TIILILRYMKENRL 237
+L M E L
Sbjct: 626 LARKLLEEMTEAGL 639
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 137/338 (40%), Gaps = 25/338 (7%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN +TY +L+ AG + A+++ +M+ G + + L++ C AG +
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 229 LRYMKENRL--ALRYPVFKEALQTFKVADENDSLLWQVHPQ--------FSP------EF 272
R M ++ + Y AL DE +L ++ + FS +F
Sbjct: 67 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 273 ISDNDAVEFVTTDIE-GPLSIDQGLVLI---LLKKKNLVAIDSLLSG-IMDKSIQLDSAV 327
S+ A + I+ G + D I L K N V + S + G ++ K +
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I C + D A E ++ + LI L K N + +++E+M
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSA 444
G S V + +I+ L + A ++F L+ E + C T+ LI A
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM-ERRNCPPNVVTHNILIDGLCKAKRI 305
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++A ++Y M G P + T+N L+ GL K +V +A
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEA 343
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF +Y +L +R VFE M G + T V+ WL +A VD
Sbjct: 532 RGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDD 591
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + + M C P I + + + R A + +EM + GL PN T+ +L
Sbjct: 592 AYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 182/485 (37%), Gaps = 69/485 (14%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V VL++ A FF W GF HD FTY ++++ K S + E M +
Sbjct: 89 VAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA 148
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY---------------- 139
GI + ++ ++ + D AV +E MK K C P + ++
Sbjct: 149 GIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKA 208
Query: 140 --------------------TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
TA ++ L RVKEA +V+ +M + G PP+ Y +++
Sbjct: 209 FEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMID 268
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +AG +EAL++ M P + IL+ CKAG + R M +
Sbjct: 269 GLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328
Query: 240 RYPVFKEALQTFKVAD---ENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
++ + F + E SL + V + P+ I+ T I+G
Sbjct: 329 NSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH-------TVMIDG------- 374
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L K N +M + + +TII+ R A + +
Sbjct: 375 ----LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y+ L+ KL + A++++E+ K S + L + L+ L
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG---SVE 487
Query: 416 KIFSLLPEDQKCTA-------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
L E K A + ++G+ G D+A +I++ M +G P T+N+
Sbjct: 488 NTLDDLFEQSKAAAENLDPGLCCSIIVGLC-KTGRLDEACRIFQRMVSEGCKPDATTYNI 546
Query: 469 LLAGL 473
L+ GL
Sbjct: 547 LINGL 551
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 201/478 (42%), Gaps = 37/478 (7%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
VN + K +E+A F ++ S GF + YT+++ F ++ R+ +F+ M E
Sbjct: 302 VNSLCKA-GTLERAEELFRVMAAS-GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G D +T+T ++ L +G+ + A +EEM C P +V+YT ++ L RV A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ K MI G P+ TY L++ + G+ +EA ++ ++ + P+ + L++
Sbjct: 420 FRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKG 479
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN--DSLLWQVHPQFSPEFI 273
C G EN L + + K A EN L +
Sbjct: 480 LCDGGSV-----------ENTL-------DDLFEQSKAAAENLDPGLCCSIIVGLCKTGR 521
Query: 274 SDNDAVEFVTTDIEG--PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI--QLDSAVIS 329
D F EG P + +++ L + ++ + + D + L AV
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTY 581
Query: 330 TIIEVN-CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
T + + C D A+ E + N + AY AL L + + +EM +
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCT-ATYTALIGVYFSAGSADK 446
G + +I+ L ++ A K F ++ + QK T ATYTAL+ AG+ D+
Sbjct: 642 QGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701
Query: 447 ALKIYKTMCRKG-IHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
A ++ M +G + S+ ++ L+ G K +V DA + E D +S+ VP
Sbjct: 702 AFHRFEGMLARGELVGSVMIYDALIHGFCKALKV-DAALKLFE------DMISRGNVP 752
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 112/527 (21%), Positives = 191/527 (36%), Gaps = 86/527 (16%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTH--------PPMEKAWLFFNWVSRS 59
V + K T + A++L + + + N V+ T M++A F+ + +
Sbjct: 302 VNSLCKAGTLERAEELFRVMAAS--GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G+ D T+T M+D ++ FE M G + VTYT+++ LS G V
Sbjct: 360 -GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVAN 418
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A I + M C+P V+Y + R+ EA + E+ + PN Y+ L++
Sbjct: 419 AFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVK 478
Query: 180 YLV------------------------------------RAGKYEEALEIFSKMQEAGVQ 203
L + G+ +EA IF +M G +
Sbjct: 479 GLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCK 538
Query: 204 PDKAACNILIEKCCKAGETRT--------IILILRYMKE----NRLALRYPVFKEALQTF 251
PD NILI C++ E R + ++ Y+ + L + E +
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
K+ +E S W +D A + T + +D+ + S
Sbjct: 599 KMLEEASSRGWN----------ADVVAYTALCTGLCYQGQVDRAV--------------S 634
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
L ++ + D+A II ++ + A F+ + Y AL+ L
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694
Query: 372 KLNTFPKVAEIVEEMTKAGHSLG-VYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKCTA 429
+ E M G +G V + LIH A + A K+F ++ TA
Sbjct: 695 HAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTA 754
Query: 430 -TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
T +L +G +KA ++ + M G P TF +L GL K
Sbjct: 755 VTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK 801
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 127/321 (39%), Gaps = 15/321 (4%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q G + +TY LM LV Y + I +M +AG+ P+ + NILI +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+ MK R K L TF + D L + + E + A+ FV
Sbjct: 172 DAVTCFEIMKRKRC-------KPDLHTFLIL--VDCLCKAGMDEKAFEVFHEMMAMGFVP 222
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
D ++ +V LLK K + + + D+ +T+I+
Sbjct: 223 PD----RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
AL + + Y L+ L K T + E+ M +G + LIH
Sbjct: 279 ALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338
Query: 404 RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
+ R A +F + E + T+T +I +G+ ++A K ++ M R G P
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
++ T+ ++ GL K+GRV++A
Sbjct: 399 NVVTYTTIIQGLSKIGRVANA 419
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 1/210 (0%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+ SRG+N D YT + ++ +F+ M +G DA Y +++ L
Sbjct: 604 ASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKK 663
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYT 175
++ A ++EM K PT+ +YTA ++ L V EA ++ M+ RG L + Y
Sbjct: 664 LEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYD 723
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ +A K + AL++F M G P L + ++G+T +L+ M
Sbjct: 724 ALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAG 783
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVH 265
F L + +DE+ LL V
Sbjct: 784 GSPPHAATFTAILDGLRKSDESGKLLKLVQ 813
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 192/460 (41%), Gaps = 20/460 (4%)
Query: 29 IKWDSYTVNQVLKTHPPMEK---AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK V+ VLK+ EK AW FF W + + + H+ Y +++D+ AK + +
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+++ +++ + S++ G V+ + +W +MK PT+ +Y M
Sbjct: 172 RFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L V A V++ M + P+ TY +++ +AG+ ++ALE M+ G++ D
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEAD 291
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
K +I+ C + + + + + M E L+ P +L + E L + +
Sbjct: 292 KITYMTMIQACYADSDFSSCVALYQEMDEK--GLQVPPHAFSLVIGGLCKEGK--LNEGY 347
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
F + + ++I L+ K ++ LL ++D+ D
Sbjct: 348 AVFE----------NMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDV 397
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
S ++ C + R + A+ F+ L + Y +LI L K + + EE
Sbjct: 398 VTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAG 442
M++ G + Y LI + A +F + E++ C TYT LI F
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEH 517
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ALK++ M KGI P+ L GL G+V+ A
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARA 557
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S VN + K + +E+A +F R G + Y++++D G+A R+ + +FE M
Sbjct: 401 SVVVNGLCK-NGRVEEAMDYFQ-TCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE-CYPTIVSYTAYMKILFLNDR 151
EKG D+ Y +++ + G VD A+ +++ M+ +E C T+ +YT + +F R
Sbjct: 459 SEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHR 518
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+EA ++ MI +G+ P L L +GK A +I ++ GV D AAC
Sbjct: 519 NEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILD-AACED 577
Query: 212 LIEKCCKAGETR 223
+I CKAG +
Sbjct: 578 MINTLCKAGRIK 589
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GFN D TY+ +++ + R+ F+ + G+ I+++ Y+S++ L AG VD A
Sbjct: 392 GFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM-IQRGLPPNCYTYTVLME 179
++EEM K C Y A + + +V EA ++K M + G YTYT+L+
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILIS 511
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ + + EEAL+++ M + G+ P A L C +G+ IL
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKIL 561
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 50/262 (19%)
Query: 18 DSAQ---DLLKNLPIKWDSYTVNQVLK-------THPPMEKAWLFFNWVSRSRGFNHDRF 67
DSA+ +++++ IK D T N ++K T +EK V ++G D+
Sbjct: 239 DSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLR-----VMETKGLEADKI 293
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINI---------------------------- 99
TY TM+ SS +++ M EKG+ +
Sbjct: 294 TYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENM 353
Query: 100 -------DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ YT ++ + G V+ A+ + M + P +V+Y+ + L N RV
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRV 413
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA D ++ GL N Y+ L++ L +AG+ +EA +F +M E G D N L
Sbjct: 414 EEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 213 IEKCCKAGETRTIILILRYMKE 234
I+ K G+ + + + M+E
Sbjct: 474 IDAFTKHGKVDEALALFKRMEE 495
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A+ L + + K DSY N ++ H +++A F + G + +TYT
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTI 508
Query: 72 MLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
++ +F E + ++K ++++M +KGI A ++ L +G V A I +E+
Sbjct: 509 LISGMFKEHRNEEALK-LWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELA-- 565
Query: 131 ECYPTIVSYTA----YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
P V A + L R+KEA + + +RG TV++ L + GK
Sbjct: 566 ---PMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGK 622
Query: 187 YEEALEI 193
+ A+++
Sbjct: 623 ADLAMKL 629
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 205/488 (42%), Gaps = 74/488 (15%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF+ D TY ++L F + +K V++ MQ+ G D +TY +++H G +D
Sbjct: 361 KGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 120 AVNIWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++++MK L P ++YT + L +R EA + EM+ G+ P TY+ L+
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI------------- 225
+AGK EEA + FS M +G +PD A +++++ + ETR
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHT 540
Query: 226 -------ILILRYMKENR------------------------LALRYPVFKEALQTFKVA 254
++IL MKENR + ++ F A + KVA
Sbjct: 541 PSHSLYELMILGLMKENRSDDVQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVA 600
Query: 255 D------ENDSLL-----WQVHPQFSPEFISDNDAVEFVTTDIEGPLS-IDQGLVLILLK 302
END+LL + + S F + +EF+ G I++ L+++ K
Sbjct: 601 ITNGYELENDTLLSILGSYSSSGRHSEAF----ELLEFLKEHASGSKRLINEALIVLHCK 656
Query: 303 KKNL-VAIDSLLSGIMDKSIQ----LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
N+ A+D L+ D + S + T++ + A F
Sbjct: 657 VNNIGAALDEYLA---DPCVHGWCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGCE 713
Query: 358 LERTAYLALIGILIKLNTFPKVA-EIVEEM-TKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ +++ + KL FP+ A ++V + TK H + +I G + A
Sbjct: 714 PSESVCKSMVVVYCKLG-FPETAYQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAE 772
Query: 416 KIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ L + + T+ +L+ Y G ++A I+ TM R G P++ + N LL L
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHAL 832
Query: 474 EKLGRVSD 481
GR+ +
Sbjct: 833 CVDGRLEE 840
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYV--FELMQEKGINIDAVTYTSVMHWLSNAG 115
R RG D ++ T+++ ++ ++ V ++++ G+ DA+TY +++ S
Sbjct: 252 RQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDS 311
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+++GAV ++E+M+ C P + +Y A + + EA ++ E+ +G P+ TY
Sbjct: 312 NLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYN 371
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK-- 233
L+ R E+ E++ +MQ+ G D+ N +I K G+ + + + MK
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 234 --ENRLALRYPVFKEAL 248
N A+ Y V ++L
Sbjct: 432 SGRNPDAITYTVLIDSL 448
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 165/395 (41%), Gaps = 16/395 (4%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT +++ +G+ K + V +++ G D T+ S+M + G + A I+ M
Sbjct: 755 YTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMM 814
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
PT+ S + L ++ R++E V +E+ G + + ++++ RAG
Sbjct: 815 RDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
E +I+S M+ AG P ++IE CK R +++ M+E + ++ L
Sbjct: 875 EVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+ + V ++ + QV+ + + + D + T L+++ + +
Sbjct: 935 KMYTVIEDYKKTV-QVYQRIKESGL-EPDETTYNT------------LIIMYCRDRRPEE 980
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
SL+ + + + ++I + + A FE + L L+R+ Y ++
Sbjct: 981 GYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMK 1040
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL--PEDQK 426
I + K ++++ M AG + LL+ S+ P A K+ S L E +
Sbjct: 1041 ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVEL 1100
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
T Y+++I Y + ++ M ++G+ P
Sbjct: 1101 TTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEP 1135
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 155/407 (38%), Gaps = 40/407 (9%)
Query: 99 IDAVTYTSVMHWLS-NA---GDVDGAVNIWEEMKLK-----ECYPTIVS----YTAYMKI 145
++ + ++ HW S NA + G + W + L PT+ Y A M +
Sbjct: 175 LEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGV 234
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL--EIFSKMQEAGVQ 203
+ + +A ++ M QRG P+ ++ L+ +++G L E+ ++ +G++
Sbjct: 235 YSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLR 294
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSL 260
PD N L+ C + + + M+ +R + + + +A E + L
Sbjct: 295 PDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 261 LWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
++ + FSP+ ++ N L+ +++N + + +
Sbjct: 355 FIELELKGFSPDAVTYN------------------SLLYAFARERNTEKVKEVYQQMQKM 396
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD-LNLERTAYLALIGILIKLNTFPK 378
D +TII + + D AL ++ + N + Y LI L K N +
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVE 456
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIG 436
A ++ EM G + + LI A + A FS L + Y+ ++
Sbjct: 457 AAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
V KA +Y+ M G PS + +++ GL K R D +
Sbjct: 517 VLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQ 563
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 81/177 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G + TY +++ FG+ K + + +FE + KG+ +D Y ++M ++G
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + + MK PT+ + M + +EA V + + Y+ +
Sbjct: 1049 SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSV 1108
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++ +R+ Y+ +E +M++ G++PD + + E ++L+L+ +++
Sbjct: 1109 IDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLLKALQD 1165
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 5/181 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + + MLD F A I + ++ M+ G Y ++ L V A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ + + + +K+ + + K+ VY+ + + GL P+ TY L+
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIM 971
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGETRTIILILRYMKEN 235
R + EE + +M+ G+ P LI +KC + E L+ + +K +
Sbjct: 972 YCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 236 R 236
R
Sbjct: 1032 R 1032
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 62/143 (43%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G DR Y TM+ I ++ S + + ++M+ GI T +M S++G+
Sbjct: 1025 SKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +K E T + Y++ + + K + EM + GL P+ +T +
Sbjct: 1085 EAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFV 1144
Query: 179 EYLVRAGKYEEALEIFSKMQEAG 201
+ + E + + +Q+ G
Sbjct: 1145 RAASFSKEKSEVMLLLKALQDIG 1167
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 182/450 (40%), Gaps = 59/450 (13%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
TVN ++ + + + ++ + + GF D+ TY T ++ + + V ++M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
++G + D TY V++ L G ++ A I +M + C P I ++ + L +R+
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA D+ +++ +G+ P+ YT+ +L+ L + G AL +F +M+ +G PD+ N L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Query: 213 IEKCCKAGETRTIILILRYMKEN---RLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
I+ C G+ + +L+ M+ R + Y + L +E + + Q+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM----- 487
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
D++G +N + ++L+ G+
Sbjct: 488 ---------------DLQG-------------ISRNAITFNTLIDGL------------- 506
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C ++ D A + L Y +++ K K A+I+E MT
Sbjct: 507 ------CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKA 447
G + V LI+ L A R A K+ + + Y ++ F + A
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L +++ M G P T+ ++ GL + G
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGG 650
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 150/395 (37%), Gaps = 61/395 (15%)
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
GI D V Y +++ L + +++ EM + P +V++ MK L +V+ A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ +EM RG+ P+ T+T LM+ V G E AL + ++M E G K N+LI
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260
Query: 216 CCKAGETRTIILILRYMKENRL---ALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPE 271
CK G + ++ + + Y F L Q V + V P+
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ N V L K L +L+ ++D+ D +T+
Sbjct: 321 VFTYNIVVN------------------CLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I C R + AL ++ ++T G
Sbjct: 363 IAALCTGNRLEEAL-----------------------------------DLARQVTVKGV 387
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKAL 448
S VY +LI+ L P A ++F + ++ CT TY LI S G KAL
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ K M G S T+N ++ GL K R+ +AE
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 200/508 (39%), Gaps = 54/508 (10%)
Query: 17 WDSAQDLLKN-----LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTY 69
+D A DL+ N I+ D+ N +L K L + S +RG D T+
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T++ A ++ + + E M +G+ D T+T++M G ++ A+ + M
Sbjct: 185 NTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
C T V+ + RV++A ++ I G P+ TY + L +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK---E 246
AL++ M + G PD NI++ CK G+ IL M + F
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
Query: 247 ALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK-K 304
AL T +E L QV + SP+ + N + + D L L L ++ K
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK------VGDPHLALRLFEEMK 418
Query: 305 NL----------VAIDSLLS-GIMDKSIQL-----------DSAVISTIIEVNCDHRRRD 342
N ID+L S G + K++ L + +TII+ C R +
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 343 GALLAFEYSVKMDL-NLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLG 398
A F+ +MDL + R A + LI L K E++ +M G +
Sbjct: 479 EAEEVFD---QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 535
Query: 399 ALLIH--RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTM 454
++L H + G ++ AA I + + + TY LI AG ALK+ + M
Sbjct: 536 SILTHYCKQGDIKK---AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KG+ P+ +N +L L + + DA
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 10/251 (3%)
Query: 18 DSAQDLLKNLPIKW---DSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
+ A DL + + +K D YT +N + K P LF ++ G D TY
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM--KNSGCTPDEVTYN 430
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T++D ++ + + M+ G +TY +++ L ++ A ++++M L+
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+++ + L + ++ +A ++ +MI GL PN TY ++ + + G ++A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+I M G + D LI CKAG T+ + +LR M+ + + LQ+
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 251 -FKVADENDSL 260
F+ + D+L
Sbjct: 611 LFRRNNIRDAL 621
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G TY T++D + RI + VF+ M +GI+ +A+T+ +++ L +D
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 513
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +M + P ++Y + + +K+A D+ + M G + TY L+
Sbjct: 514 DAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLI 573
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK---EN 235
L +AG+ + AL++ M+ G++P A N +++ + R + + R M E
Sbjct: 574 NGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633
Query: 236 RLALRYPVFKEAL--QTFKVADENDSLLWQVHPQFSPEFIS 274
AL Y + L + + D +L V F PEF S
Sbjct: 634 PDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 674
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T+T L+ + GS + AL++ M G + T NVL+ G KLGRV DA Y +++
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
Query: 490 KSIQADALSKDAV 502
AD D +
Sbjct: 278 I---ADGFEPDQI 287
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 200/455 (43%), Gaps = 45/455 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + + TY T++ F A + + + ++M+E G+ + VT+ SV++ + AG +
Sbjct: 184 RGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRM 243
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A +++EM + P VSY + EA V+ EM ++G+ P+ T+T L
Sbjct: 244 EDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + +AG E A+ + +M+E G+Q ++ LI+ CK G +L +R M++ R+
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363
Query: 238 ALRYPVFKEALQTFKVA---DENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSID 293
+ + + + DE L+ ++ + P D V + T
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKP------DVVTYST---------- 407
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
++ K + + L +++ + D+ S++I V C+ +R A + F+ +
Sbjct: 408 --ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMIS 465
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR--- 410
+ L + Y +LI K + + +EM KAG V ++LI+ L + R
Sbjct: 466 LGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKE 525
Query: 411 ------------PVPAAKIFSLLPEDQKCT-----ATYTALIGVYFSAGSADKALKIYKT 453
PVPA + L +C + AL+ + G ++A K+Y++
Sbjct: 526 AQRLLFKLYHEEPVPANIKYDAL---MRCCRNAELKSVLALLKGFCMKGLMNEADKVYQS 582
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ + + ++VL+ G + G V A + K+
Sbjct: 583 ILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQ 617
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 188/487 (38%), Gaps = 102/487 (20%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ Y +L +A S+ ++ F+ M G+ + TY ++ L G A
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRF-FDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ +M+ C P V+Y + V A + M + GL PN T+ ++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ +AG+ E+A ++F +M + G+ PD + N L+ CK G +
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSH----------------- 279
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
EAL F + P D V F + L+ ++
Sbjct: 280 -----EALSVFAEMTRKG-----IMP----------DVVTFTS------------LIHVM 307
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K NL L+ + ++ +Q++ + +I+ C D ALLA + +
Sbjct: 308 CKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSV 367
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAG---------------------HSL------ 393
Y ALI + + E+V EM G HS
Sbjct: 368 VCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQ 427
Query: 394 ----GVYLGAL----LIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYF 439
GV A+ LI L +R A +F L P++ TYT+LI +
Sbjct: 428 MLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDE----VTYTSLIDGHC 483
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE-----IYRKE--KKSI 492
G+ ++AL ++ M + G+ P + T++VL+ GL K R +A+ +Y +E +I
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543
Query: 493 QADALSK 499
+ DAL +
Sbjct: 544 KYDALMR 550
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 22 DLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D+++ +K + T N V+ ME A F+ + + G D +Y T++ + +
Sbjct: 216 DMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVK-EGLAPDGVSYNTLVGGYCK 274
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
VF M KGI D VT+TS++H + AG+++ AV + EM+ + ++
Sbjct: 275 VGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEIT 334
Query: 139 YTA----YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+TA + K FL+D A +EM Q + P+ Y L+ G+ +EA E+
Sbjct: 335 FTALIDGFCKKGFLDD----ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELV 390
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+M+ GV+PD + ++ CK G+T + + + M EN
Sbjct: 391 REMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN 431
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 144/334 (43%), Gaps = 9/334 (2%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG + T+T ++D F + + M++ I V Y ++++ G +
Sbjct: 324 RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM 383
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + EM+ K P +V+Y+ + N A + ++M++ G+ P+ TY+ L
Sbjct: 384 DEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSL 443
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET-RTIILILRYMKENR 236
+ L + +A +F M G+QPD+ LI+ CK G R + L +K
Sbjct: 444 IRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGV 503
Query: 237 L--ALRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFV-TTDIEGPLSI 292
L + Y V L E LL+++ H + P I + + +++ L++
Sbjct: 504 LPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLAL 563
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
+G + K + D + I+D++ LD +V S +I +C AL + +
Sbjct: 564 LKGFCM----KGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQML 619
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+ T+ ++LI L + + ++++++
Sbjct: 620 QCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 193/502 (38%), Gaps = 34/502 (6%)
Query: 1 MRDTISNVYKILKYSTW--------DSAQDLLKNLP-------IKWDSYTVNQVLKTHPP 45
+ D S ++ LK S W D + ++ NL IK V+ +L++
Sbjct: 61 LSDVASRTHQDLKPSPWVNQILALLDGSSNMESNLDTFCHMFLIKLSPSFVSFILRSTEL 120
Query: 46 MEK---AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
K A FF W + + + H+ Y +++D+ + S+K VF +E G+ +
Sbjct: 121 QTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVY 180
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
+ S++ N G V+ + +W MK P++ SY + L + ++ A V++ M
Sbjct: 181 SSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVM 240
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ P+ TY +++ GK +A E M+ V PDK LI+ C G+
Sbjct: 241 ENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDF 300
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ + + M E L + V+ + D + V + N A+
Sbjct: 301 DSCLGLYHEMDEKGLEIPPHVYSLVIGGL-CKDGKRVEGYTVFENMISKGCKANVAIYTA 359
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
D + G ++L K+ + + ++ D I+ C R D
Sbjct: 360 LIDSNAKCG-NMGEAMLLFKR------------MKKEGLEPDEVTYGVIVNSLCKSGRLD 406
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
AL E+ + + Y +LI L K + I EM K G Y LI
Sbjct: 407 EALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALI 466
Query: 403 HRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
L + A + + D + TYT LI F ++AL ++ M KGI
Sbjct: 467 DALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGIT 526
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P+ F L GL G+V+ A
Sbjct: 527 PTAAAFRALSTGLCLSGKVARA 548
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M +A L F + + G D TY +++ ++ R+ E KG+ ++A+ Y+
Sbjct: 370 MGEAMLLFKRMKK-EGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYS 428
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L +G VD A I+ EM K C P Y A + L ++ EA + K M
Sbjct: 429 SLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVD 488
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G YTYT+L+ L R + EEAL ++ M + G+ P AA L C +G+
Sbjct: 489 GCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARA 548
Query: 226 ILILRYM 232
IL M
Sbjct: 549 CKILDEM 555
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 165/396 (41%), Gaps = 27/396 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY TM+ + E + + M+ + + D +TY +++ GD D + ++
Sbjct: 248 DVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLY 307
Query: 125 EEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
EM K E P + Y+ + L + + E V++ MI +G N YT L++
Sbjct: 308 HEMDEKGLEIPPHV--YSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNA 365
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR-- 240
+ G EA+ +F +M++ G++PD+ +++ CK+G + + + +A+
Sbjct: 366 KCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAM 425
Query: 241 -YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y + L DE + + +++ + P D+ + + ID+ L L
Sbjct: 426 FYSSLIDGLGKSGRVDEAERIFYEMVKKGCP---PDSYCYNALIDALAKCGKIDEALAL- 481
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ +D D+++ + +I+ + +HR + AL ++ + +
Sbjct: 482 ----SKRMEVDGC-----DQTVYTYTILITGLFR---EHRNEE-ALTLWDLMIDKGITPT 528
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
A+ AL L + +I++EM G + I+ L A R A K+
Sbjct: 529 AAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDM-INILCKAGRIKEACKLAD 587
Query: 420 LLPEDQK--CTATYTALIGVYFSAGSADKALKIYKT 453
+ + + T LI AG+AD ALK+ ++
Sbjct: 588 GIVDRGREIPGRVRTVLINALRKAGNADLALKLMRS 623
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E +F+ V + G D + Y ++D + +I + + M+ G + TYT
Sbjct: 442 EAERIFYEMVKK--GCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTI 499
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L + A+ +W+ M K PT ++ A L L+ +V A + EM G
Sbjct: 500 LITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMG 559
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ P + ++ L +AG+ +EA ++ + + G + +LI KAG +
Sbjct: 560 VIPET-AFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLAL 618
Query: 227 LILR 230
++R
Sbjct: 619 KLMR 622
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 124/325 (38%), Gaps = 53/325 (16%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q+ N Y L++ L G + +FSK +E G+ + N LI+ G
Sbjct: 137 QKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVE 196
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFV 282
++ + R MKEN + P FS F+ +
Sbjct: 197 EVLWVWRRMKEN---------------------------GIEPSLFSYNFLVNG------ 223
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
L+ K + + + + + + I D +T+I+ C+ +
Sbjct: 224 -----------------LVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTR 266
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A + ++ ++ Y+ LI F + EM + G + ++ +L+I
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVI 326
Query: 403 HRLGSARRPVPAAKIF-SLLPEDQKCT-ATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
L + V +F +++ + K A YTALI G+ +A+ ++K M ++G+
Sbjct: 327 GGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLE 386
Query: 461 PSLGTFNVLLAGLEKLGRVSDAEIY 485
P T+ V++ L K GR+ +A Y
Sbjct: 387 PDEVTYGVIVNSLCKSGRLDEALEY 411
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 139/382 (36%), Gaps = 71/382 (18%)
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
ECY +++ A +L D VK +KEM GL Y+ L++ G EE
Sbjct: 145 ECYVSLIDVLATNGVL---DSVKSVFSKFKEM---GLIMTVYSSNSLIKSFGNLGMVEEV 198
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK----- 245
L ++ +M+E G++P + N L+ + + + M+ ++ +
Sbjct: 199 LWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKG 258
Query: 246 --EALQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
E +T K ++ ++ L V P D + ++T L+
Sbjct: 259 YCEVGKTRKAFEKLKAMELRNVAP----------DKITYMT------------LIQACYA 296
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+ + + L + +K +++ V S +I C +R FE +
Sbjct: 297 EGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAI 356
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ALI K + + + M K G L P
Sbjct: 357 YTALIDSNAKCGNMGEAMLLFKRMKKEG-----------------------------LEP 387
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ TY ++ +G D+AL+ + KG+ + ++ L+ GL K GRV +A
Sbjct: 388 DE----VTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEA 443
Query: 483 E--IYRKEKKSIQADALSKDAV 502
E Y KK D+ +A+
Sbjct: 444 ERIFYEMVKKGCPPDSYCYNAL 465
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 185/425 (43%), Gaps = 19/425 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FTYT+M+ + + + S +F M E+G +A TY+++++ L N+G V+ A
Sbjct: 258 GMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEA 317
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM PT+ ++TA + L R+++A ++ +M ++G PN YTYT L+
Sbjct: 318 LDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG 377
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
R + A+ +F +M GV P+ N L+ + E + +++ M ++
Sbjct: 378 -QRVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPN 434
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ E ++ + + + + + + VT +I D G +
Sbjct: 435 TSSYNELIRGYCTIGDTEKAMSML-----TNMLKGRPTPTLVTYNIIIKGYCDSGDTDVA 489
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
++ L+ + Q D + +I C + + A F + L
Sbjct: 490 IRVLELMKAN---------GCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNE 540
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y ALI K A ++E M ++G V +LIH L A ++ +
Sbjct: 541 VTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 600
Query: 421 LPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ E++ TY+ +I + G+ AL+++ M + G P+L T++ L+ L + GR
Sbjct: 601 MLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGR 660
Query: 479 VSDAE 483
V +AE
Sbjct: 661 VEEAE 665
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A FN + RG + TYT ++ + + +++ + E M+ G + TY
Sbjct: 521 MELASGMFNEM-MDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYN 579
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++H L+ + GA + + M ++ P +V+Y+ + L N + A +++ +M++
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKH 639
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
G PN +TY+ L++ L + G+ EEA E+FS++++ G+ PD+ +IE C +G+
Sbjct: 640 GCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGK 695
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 83/147 (56%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ + S + + ++M E+ I+ D VTY++V++ L N G + A+ ++ +M
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKM 636
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C P + +Y++ ++ L RV+EA +++ E+ ++GL P+ TY ++E V +GK
Sbjct: 637 VKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKV 696
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE 214
+ A + +M AG QP ++LI+
Sbjct: 697 DRAFDFLGEMINAGCQPTLQTYDVLIK 723
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D ++YT ++ F + ++ +F M ++G+ + VTYT+++ +
Sbjct: 497 KANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKL 556
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + E MK C P + +Y + L + A ++ K M++ + P+ TY+ +
Sbjct: 557 DCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTV 616
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ L G ALE+F+KM + G P+ + LI+ + G
Sbjct: 617 INGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEG 659
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/412 (19%), Positives = 165/412 (40%), Gaps = 71/412 (17%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+A+ ++ Y+ ++ ++G + TYT+++ L+ ++ + ++ + P ++
Sbjct: 171 KAEMTQALNYL-DMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLL 229
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
Y + + L + V++A + ++ + G+ P+ +TYT ++ R + A EIF++M
Sbjct: 230 IYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM 289
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
E G +P+ A + LI C +G + + M +
Sbjct: 290 DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRH---------------------- 327
Query: 258 DSLLWQVHPQFSPEF-ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK----NLVAIDSL 312
+L VH +P + D +E D + I +KKK N+ SL
Sbjct: 328 -GVLPTVHTFTAPIVALCDMGRIE------------DAWKIFIDMKKKGCKPNVYTYTSL 374
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHR-RRDGALL-AFEYSVKMDL---NLERTAYLALI 367
+SG + + + HR RDG + Y+ M++ N+E + L +
Sbjct: 375 ISGQR-----------VSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVF 423
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
++ K P + E+ + ++G A+ + RP P
Sbjct: 424 NMMGKHGCLPNTSS-YNELIRGYCTIGDTEKAMSMLTNMLKGRPTPT------------- 469
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
TY +I Y +G D A+++ + M G P ++ L++G K+ ++
Sbjct: 470 LVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY+T+++ I +F M + G + TY+S++ L G V+ A ++
Sbjct: 609 DVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMF 668
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
E+K + P V+Y +++ ++ +V A D EMI G P TY VL++ L
Sbjct: 669 SELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 65/157 (41%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F R Y +L + R ++ M + + TY + L A VD A+
Sbjct: 768 FELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAM 827
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
++++ M + C + Y + L R KEA V+++M+ R L + +T+L+ L
Sbjct: 828 DVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGL 887
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ AG + +E M+ P A IL + K
Sbjct: 888 LGAGYKDLCMEFLHIMETNRRNPSSHARTILAREALK 924
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
Y +++ LS +G A N++ M + P +Y ++ L +V A DV+K M
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ + Y L+ L + + +EA +F KM + D+ ILI AG
Sbjct: 835 DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKD 894
Query: 224 TIILILRYMKENR 236
+ L M+ NR
Sbjct: 895 LCMEFLHIMETNR 907
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 190/477 (39%), Gaps = 89/477 (18%)
Query: 13 KYSTWDSAQDLLKNL---PIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDR 66
+ +D A+ + +++ + + YT N +++ + +EK F + + G + +
Sbjct: 184 NHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEK-EGISPNV 242
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY T++D + K++ + M G+ + ++Y SV++ L G + + EE
Sbjct: 243 VTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEE 302
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M+ K P V+Y + + + + EM+ +GL PN TYT L+ + +AG
Sbjct: 303 MRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGN 362
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
A+EIF +M+ G++P++ LI+ C+ G + E
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKG----------------------LMNE 400
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
A +KV E + FSP ++ N V L + +
Sbjct: 401 A---YKVLSE------MIVSGFSPSVVTYNALVHGYC---------------FLGRVQEA 436
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
V I L G++++ + D ST+I C R A E V+ + + Y +L
Sbjct: 437 VGI---LRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I L + ++ EM + G LP D+
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRG------------------------------LPPDE- 522
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TYT+LI Y G KAL+++ M ++G P T++VL+ GL K R A+
Sbjct: 523 --VTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAK 577
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 182/450 (40%), Gaps = 59/450 (13%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
TVN ++ + + + ++ + + GF D+ TY T ++ + + V ++M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
++G + D TY V++ L G ++ A I +M + C P I ++ + L +R+
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA D+ +++ +G+ P+ YT+ +L+ L + G AL +F +M+ +G PD+ N L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Query: 213 IEKCCKAGETRTIILILRYMKEN---RLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
I+ C G+ + +L+ M+ R + Y + L +E + + Q+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM----- 487
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
D++G +N + ++L+ G+
Sbjct: 488 ---------------DLQG-------------ISRNAITFNTLIDGL------------- 506
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C ++ D A + L Y +++ K K A+I+E MT
Sbjct: 507 ------CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKA 447
G + V LI+ L A R A K+ + + Y ++ F + A
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L +++ M G P T+ ++ GL + G
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGG 650
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 200/508 (39%), Gaps = 54/508 (10%)
Query: 17 WDSAQDLLKN-----LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTY 69
+D A DL+ N I+ D+ N +L K L + S +RG D T+
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T++ A ++ + + E M +G+ D T+T++M G ++ A+ + M
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
C T V+ + RV++A ++ I G P+ TY + L +
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK---E 246
AL++ M + G PD NI++ CK G+ IL M + F
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 364
Query: 247 ALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK-K 304
AL T +E L QV + SP+ + N + + D L L L ++ K
Sbjct: 365 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK------VGDPHLALRLFEEMK 418
Query: 305 NL----------VAIDSLLS-GIMDKSIQL-----------DSAVISTIIEVNCDHRRRD 342
N ID+L S G + K++ L + +TII+ C R +
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 343 GALLAFEYSVKMDL-NLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLG 398
A F+ +MDL + R A + LI L K E++ +M G +
Sbjct: 479 EAEEVFD---QMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYN 535
Query: 399 ALLIH--RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTM 454
++L H + G ++ AA I + + + TY LI AG ALK+ + M
Sbjct: 536 SILTHYCKQGDIKK---AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KG+ P+ +N +L L + + DA
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 112/251 (44%), Gaps = 10/251 (3%)
Query: 18 DSAQDLLKNLPIKW---DSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
+ A DL + + +K D YT +N + K P LF ++ G D TY
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM--KNSGCTPDEVTYN 430
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T++D ++ + + M+ G +TY +++ L ++ A ++++M L+
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+++ + L + ++ +A ++ +MI GL PN TY ++ + + G ++A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+I M G + D LI CKAG T+ + +LR M+ + + LQ+
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 251 -FKVADENDSL 260
F+ + D+L
Sbjct: 611 LFRRNNIRDAL 621
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G TY T++D + RI + VF+ M +GI+ +A+T+ +++ L +D
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 513
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +M + P ++Y + + +K+A D+ + M G + TY L+
Sbjct: 514 DAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLI 573
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK---EN 235
L +AG+ + AL++ M+ G++P A N +++ + R + + R M E
Sbjct: 574 NGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633
Query: 236 RLALRYPVFKEAL--QTFKVADENDSLLWQVHPQFSPEFIS 274
AL Y + L + + D +L V F PEF S
Sbjct: 634 PDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 674
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 174/457 (38%), Gaps = 36/457 (7%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L+ P + A N F Y ++ G + MK + M+ +G +
Sbjct: 48 LREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQV 107
Query: 100 DAVTYTSVMHWLSNAGDVDGAVN-IWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATD 157
S + D AV+ I +++ L V Y + +L ++K
Sbjct: 108 KLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLES 167
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
VY EM RG+ P+ T+ LM+ L RA + A+ + +M GV PD+ L++
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFI 273
+ G + + M E + + + +V D + ++ F P+ I
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ--LDSAVISTI 331
+ N T + G D V LK +MD +Q D V +
Sbjct: 288 TYN-------TFVNGLCQNDH--VGHALK-------------VMDVMVQEGHDPDVFTYN 325
Query: 332 IEVN--CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
I VN C + + + A V + T + LI L N + ++ ++T
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADK 446
G S VY +LI+ L P A ++F + ++ CT TY LI S G K
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
AL + K M G S T+N ++ GL K R+ +AE
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T+T L+ + GS + AL++ M G + T NVL+ G KLGRV DA Y +++
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
Query: 490 KSIQADALSKDAV 502
AD D +
Sbjct: 278 I---ADGFEPDQI 287
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 110/226 (48%), Gaps = 6/226 (2%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ L + M+ A+ FN + ++G D FTY ++ R S + M E
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVK 153
K IN D V + +++ G + A +++EM K K C+P +V+Y +K RV+
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
E +V++EM QRGL N TYT L+ +A + A +F +M GV PD NIL+
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILL 433
Query: 214 EKCCKAGETRTIILILRYMKENRLAL---RYPVFKEAL-QTFKVAD 255
+ C G T +++ YM++ + L Y EAL + KV D
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 204/496 (41%), Gaps = 66/496 (13%)
Query: 19 SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
S+ D +NL S V Q LK ++ A F + +SR F ++ +L +
Sbjct: 38 SSDDCRENL-----SRKVLQDLK----LDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAK 87
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+ + + E MQ GI+ + TY+ +++ + A+ I +M P+IV+
Sbjct: 88 MNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVT 147
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ + +R+ EA + +M++ G P+ T+T L+ L + K EA+ + +M
Sbjct: 148 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 207
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
G QPD +I CK GE + +L M++ ++ E D
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI------------------EAD 249
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+++ T I+G L K K++ L + +
Sbjct: 250 VVIYN--------------------TIIDG-----------LCKYKHMDDAFDLFNKMET 278
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
K I+ D + +I C++ R A ++ ++N + + ALI +K +
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE 338
Query: 379 VAEIVEEMTKAGHSL-GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALI 435
++ +EM K+ H V LI +R ++F + + T TYT LI
Sbjct: 339 AEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK--EKKSIQ 493
+F A D A ++K M G+HP + T+N+LL GL G V A + + +K+ ++
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 494 ADALSKDAVPMEEKIC 509
D ++ M E +C
Sbjct: 459 LDIVT--YTTMIEALC 472
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+ F +S+ RG + TYTT++ F +A+ + + VF+ M G++ D +TY
Sbjct: 372 VEEGMEVFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L N G+V+ A+ ++E M+ ++ IV+YT ++ L +V++ D++ + +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI------------ 213
G+ PN TYT +M R G EEA +F +M+E G P+ N LI
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 214 -------EKCCKAGETRTIILILRYMKENRL 237
C AG+ T L+ + + RL
Sbjct: 551 AELIKEMRSCGFAGDASTFGLVTNMLHDGRL 581
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 6/231 (2%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNH 64
+ Y W A LL ++ I D N ++ + +A ++ + +S+
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y T++ F + KR+ VF M ++G+ + VTYT+++H A D D A ++
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M +P I++Y + L N V+ A V++ M +R + + TYT ++E L +A
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
GK E+ ++F + GV+P+ ++ C+ G + MKE+
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/491 (20%), Positives = 193/491 (39%), Gaps = 54/491 (10%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ K+ S + ++NL I + YT + + + L + + G+
Sbjct: 82 LSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGY 141
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
T ++L+ F RIS + + M E G D VT+T+++H L AV
Sbjct: 142 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ E M +K C P +V+Y A + L A ++ +M + + + Y +++ L
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ ++A ++F+KM+ G++PD N LI C G R+ +RL
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG---------RWSDASRLL---- 308
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+D L ++P D V F L+ +K
Sbjct: 309 --------------SDMLEKNINP----------DLVFF------------NALIDAFVK 332
Query: 303 KKNLVAIDSLLSGIM-DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
+ LV + L ++ K D +T+I+ C ++R + + F + L
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y LI + + ++M G + +L+ L + A +F +
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 422 PE-DQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ D K TYT +I AG + ++ ++ KG+ P++ T+ +++G + G
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 480 SDAEIYRKEKK 490
+A+ E K
Sbjct: 513 EEADALFVEMK 523
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 175/434 (40%), Gaps = 55/434 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D T+TT++ + + S + E M KG D VTY +V++ L G+ D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+N+ +M+ + +V Y + L + +A D++ +M +G+ P+ +TY L+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
L G++ +A + S M E + PD N LI+ K G+ + M +++
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 239 --LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y + +K +E +V + S + N TT I G
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEG----MEVFREMSQRGLVGNTVT--YTTLIHG-------- 400
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ ++ + ++ + D + +++ C++ + AL+ FEY K D+
Sbjct: 401 ---FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
L+ Y +I E + KAG V G L L S + P
Sbjct: 458 KLDIVTYTTMI----------------EALCKAGK---VEDGWDLFCSL-SLKGVKPNV- 496
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-AGLEK 475
TYT ++ + G ++A ++ M G P+ GT+N L+ A L
Sbjct: 497 ------------VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 476 LGRVSDAEIYRKEK 489
+ AE+ ++ +
Sbjct: 545 GDEAASAELIKEMR 558
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 182/450 (40%), Gaps = 59/450 (13%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
TVN ++ + + + ++ + + GF D+ TY T ++ + + V ++M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
++G + D TY V++ L G ++ A I +M + C P I ++ + L +R+
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA D+ +++ +G+ P+ YT+ +L+ L + G AL +F +M+ +G PD+ N L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Query: 213 IEKCCKAGETRTIILILRYMKEN---RLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
I+ C G+ + +L+ M+ R + Y + L +E + + Q+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM----- 487
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
D++G +N + ++L+ G+
Sbjct: 488 ---------------DLQG-------------ISRNAITFNTLIDGL------------- 506
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C ++ D A + L Y +++ K K A+I+E MT
Sbjct: 507 ------CKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKA 447
G + V LI+ L A R A K+ + + Y ++ F + A
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L +++ M G P T+ ++ GL + G
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGG 650
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 10/251 (3%)
Query: 18 DSAQDLLKNLPIKW---DSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
+ A DL + + +K D YT +N + K P LF ++ G D TY
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM--KNSGCTPDEVTYN 430
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T++D ++ + + M+ G +TY +++ L ++ A ++++M L+
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+++ + L + ++ +A + +MI GL PN TY ++ + + G ++A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+I M G + D LI CKAG T+ + +LR M+ + + LQ+
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610
Query: 251 -FKVADENDSL 260
F+ + D+L
Sbjct: 611 LFRRNNIRDAL 621
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 5/221 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G TY T++D + RI + VF+ M +GI+ +A+T+ +++ L +D
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 513
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +M + P ++Y + + +K+A D+ + M G + TY L+
Sbjct: 514 DAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLI 573
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK---EN 235
L +AG+ + AL++ M+ G++P A N +++ + R + + R M E
Sbjct: 574 NGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633
Query: 236 RLALRYPVFKEAL--QTFKVADENDSLLWQVHPQFSPEFIS 274
AL Y + L + + D +L V F PEF S
Sbjct: 634 PDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSS 674
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 174/457 (38%), Gaps = 36/457 (7%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L+ P + A N F Y ++ G + MK + M+ +G +
Sbjct: 48 LREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQV 107
Query: 100 DAVTYTSVMHWLSNAGDVDGAVN-IWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATD 157
S + D AV+ I +++ L V Y + +L ++K
Sbjct: 108 KLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLES 167
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
VY EM RG+ P+ T+ LM+ L RA + A+ + +M GV PD+ L++
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFI 273
+ G + + M E + + + +V D + ++ F P+ I
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ--LDSAVISTI 331
+ N T + G D V LK +MD +Q D V +
Sbjct: 288 TYN-------TFVNGLCQNDH--VGHALK-------------VMDVMVQEGHDPDVFTYN 325
Query: 332 IEVN--CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
I VN C + + + A V + T + LI L N + ++ ++T
Sbjct: 326 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 385
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADK 446
G S VY +LI+ L P A ++F + ++ CT TY LI S G K
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGK 444
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
AL + K M G S T+N ++ GL K R+ +AE
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T+T L+ + GS + AL++ M G + T NVL+ G KLGRV DA Y +++
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277
Query: 490 KSIQADALSKDAV 502
AD D +
Sbjct: 278 I---ADGFEPDQI 287
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/503 (21%), Positives = 203/503 (40%), Gaps = 95/503 (18%)
Query: 4 TISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
T + ++ Y W + +LL + TV Q L+ KA+LFFNW+ +GF+
Sbjct: 58 TAKTIANLINYKPW--SDELLSSFTTSLSKTTVFQTLRHIKVPTKAFLFFNWI-HEKGFS 114
Query: 64 HDRFTYTTMLDIFGEAKRISSMK---YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
H+ TY ML+I G K ++ + Y E + ++ + S++ AG +
Sbjct: 115 HNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKES 174
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLME 179
V ++E MKL P +V++ + + +L R A +VY EM++ G+ P+ YTY +L+
Sbjct: 175 VKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIR 234
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ +E F +M PD N L++ C+AG+ + ++ M +
Sbjct: 235 GFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSK----- 289
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG---PLSIDQGL 296
K D SP+ ++ TT I G +D+ L
Sbjct: 290 ------------KCKD------------LSPDVVT-------YTTLIRGYCRKQEVDEAL 318
Query: 297 VLILLK-----KKNLVAIDSLLSGIM-----DKSIQL------------DSAVISTIIEV 334
++ K N+V ++L+ G+ DK ++ D+ +T+I
Sbjct: 319 DILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINS 378
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
+C D A FE K++++ + +Y LI L + + K + +E+
Sbjct: 379 HCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDEL-------- 430
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
+ +L+ G P P A A+Y + G KA ++ + +
Sbjct: 431 -FEKEILLSSYG----PKPLA-------------ASYKCMFQYLCENGKTKKAERVLRQL 472
Query: 455 CRKGIHPSLGTFNVLLAGLEKLG 477
++G L ++ +++ G K G
Sbjct: 473 MKRGTQDPL-SYQIVILGHCKEG 494
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 112/508 (22%), Positives = 217/508 (42%), Gaps = 53/508 (10%)
Query: 22 DLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
++LK +K D+YT N +++ + +++ + FF ++ S + D TY T++D
Sbjct: 215 EMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMT-SFDCDPDVVTYNTLVDGLCR 273
Query: 79 AKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
A +I + M +K ++ D VTYT+++ +VD A++I EEM + P I
Sbjct: 274 AGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNI 333
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRG--LPPNCYTYTVLMEYLVRAGKYEEALEIF 194
V+Y +K L + + ++ ++M G +P C T+ L+ AG +EA ++F
Sbjct: 334 VTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDAC-TFNTLINSHCCAGNLDEAFKVF 392
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY----PVFKEALQT 250
M++ V D A+ ++LI C+ G+ ++ + E + L P+
Sbjct: 393 ENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCM 452
Query: 251 FKVADEN------DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
F+ EN + +L Q+ + + + +S + + EG GL++ +L++
Sbjct: 453 FQYLCENGKTKKAERVLRQLMKRGTQDPLSYQ--IVILGHCKEGSYENGYGLLVWMLRRD 510
Query: 305 NLVAID---SLLSGIMDKSIQLDS--------------------AVISTIIEVNCDHRRR 341
L ID L+ G + K L + ++++ ++E C H
Sbjct: 511 FLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESA 570
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
++ E +++ ++N + +L K +I E + K G + + +
Sbjct: 571 GVIVMMLERNIRQNINFSTKC----LQLLFDRGLQDKAFKITELIYKNGFCVKM---DEV 623
Query: 402 IHRLGSARRPVPAAKI--FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ L + RR + A K+ FSL + +I A +A + + KG+
Sbjct: 624 VQFLCNKRRALEACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYELVDKGL 683
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
H L N L+A LE GR +A K
Sbjct: 684 HQDLICLNDLVAALEAGGRTEEAAFISK 711
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 206/482 (42%), Gaps = 41/482 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTY 104
+ A FF+ + S G + +TY ++ + G R ++ + M+ G + VTY
Sbjct: 171 LTSARRFFDSM-LSDGVAPNVYTYNILVRALCGRGHRKEALS-ILRDMRGAGCGPNVVTY 228
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+++ AG+VDGA + M+ P +V++ + + + ++++A V+ EM++
Sbjct: 229 NTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVR 288
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
GL P+ +Y L+ +AG EAL +F++M + G+ PD LI CKAG
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348
Query: 225 IILILRYMKENRLALRYPVFKEALQTF-KVADENDSLL---WQVHPQFSPEFISDNDAV- 279
+ ++R M+E L + F + F K +D+LL + P + N +
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALIN 408
Query: 280 ----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
E ++ + ++ K + + L +++K +
Sbjct: 409 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 468
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D+ S++I V C +R A + F+ +K+ L + Y +LI K +
Sbjct: 469 DAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLH 528
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK-IFSLLPED-----------QKCT--- 428
++M KAG V ++LI+ L + R + A + +F L ED C
Sbjct: 529 DKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKA 588
Query: 429 --ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
+ AL+ + G ++A K+Y++M + + ++VL+ G + G V A +
Sbjct: 589 ELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFH 648
Query: 487 KE 488
K+
Sbjct: 649 KQ 650
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 180/464 (38%), Gaps = 95/464 (20%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ Y +L +A S+ ++ F+ M G+ + TY ++ L G A
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTSARRF-FDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++I +M+ C P +V+Y + F V A + M + GL PN T+ ++
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ +AGK E+A ++F +M G+ PD + N L+ CKAG +
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSH----------------- 312
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
EAL F + + P D V F + L+ ++
Sbjct: 313 -----EALSVFAEMTQKG-----IMP----------DVVTFTS------------LIHVM 340
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K NL +L+ + ++ +Q++ + +I+ C D ALLA + +
Sbjct: 341 CKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSV 400
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAG---------------------HSL------ 393
Y ALI + + E++ EM G HS
Sbjct: 401 VCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQ 460
Query: 394 ----GVYLGAL----LIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYF 439
GV A+ LI L +R A +F L P++ TYT+LI +
Sbjct: 461 MLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDE----FTYTSLIDGHC 516
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ + AL ++ M + G+ P + T++VL+ GL K R +A+
Sbjct: 517 KEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 560
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 30/247 (12%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVLK-------THPPMEKAWLFFNWVSRSRGFNHDR 66
D A++LL + +K D T + ++ TH E N +G D
Sbjct: 416 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE-----LNQQMLEKGVLPDA 470
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY++++ + KR+S +F+ M + G+ D TYTS++ G+V+ A+++ ++
Sbjct: 471 ITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDK 530
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA-- 184
M P +V+Y+ + L + R EA + ++ P Y LM +A
Sbjct: 531 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAEL 590
Query: 185 -------------GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
G EA +++ M + D + ++LI C+AG + +
Sbjct: 591 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 650
Query: 232 MKENRLA 238
M + A
Sbjct: 651 MLQGGFA 657
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 18/218 (8%)
Query: 14 YSTWDSAQDLLKN--LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
+S ++ Q +L+ LP ++ +VL + A + F + + G D FTYT+
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIK-LGLQPDEFTYTS 510
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++D + + S + + M + G+ D VTY+ +++ LS + A + ++ ++
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHED 570
Query: 132 CYPTIVSYTAYM---------------KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
P Y A M K + + EA VY+ M+ R + Y+V
Sbjct: 571 PIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSV 630
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
L+ RAG +AL +M + G P+ + LI
Sbjct: 631 LIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIR 668
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 55/117 (47%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V++ M ++ N+D Y+ ++H AG+V A++ ++M P S + ++ LF
Sbjct: 612 VYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLF 671
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
N V EA V ++++ + L++ + G + L++ M + G+ P
Sbjct: 672 ENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 185/437 (42%), Gaps = 18/437 (4%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A+ FF W + + + H Y +++D+ + ++ +F +EKG + S++
Sbjct: 138 AFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLI 197
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
G V+ + +W MK P++ ++ + L + ++ A V++ M +
Sbjct: 198 RSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIG 257
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ +Y +++ +AG ++A+E F+ M++ ++PDK LI+ C G + + +
Sbjct: 258 PDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHL 317
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
+ M+E L P +L + + ++ + S F + N +
Sbjct: 318 YQEMEER--GLEIPPHAYSLVIGGLCKDGRTV------EGSSVFENMN------KKGCKA 363
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
++I L+ K N+ +L + + + D I+ C R D A+ F
Sbjct: 364 NVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYF 423
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
E+ ++ + Y +LI L K + + EEM + G Y LI L +
Sbjct: 424 EFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKS 483
Query: 409 RRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+ A +F + E + C TYT LI F ++ALK++ M KGI P+ +
Sbjct: 484 GKMEEALVLFKRM-EKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTAS 542
Query: 466 FNVLLAGLEKLGRVSDA 482
F L GL G+V+ A
Sbjct: 543 FRALSVGLCLSGKVARA 559
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ GF D TY +++ ++ R+ FE ++ + ++A+ Y+S++ L AG V
Sbjct: 392 KGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRV 451
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A +EEM + C Y A + L + +++EA ++K M + G YTYT+L
Sbjct: 452 DEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTIL 511
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ L + + EEAL+++ M + G+ P A+ L C +G+ IL
Sbjct: 512 ISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKIL 563
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 34/186 (18%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y++++D G+A R+ + FE M E+G D+ Y +++ L+ +G ++ A+ +++ M+
Sbjct: 438 YSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRME 497
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL----------- 177
+ C T+ +YT + LF R +EA ++ MI +G+ P ++ L
Sbjct: 498 KEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVA 557
Query: 178 -----------------------MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ L +AG+ E+A ++ + + G + ILI
Sbjct: 558 RACKILDELAPMGVIPETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILIN 617
Query: 215 KCCKAG 220
KAG
Sbjct: 618 ALRKAG 623
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I D +T+I+ C A+ F K +L ++ YL LI F
Sbjct: 256 IGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCL 315
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGV 437
+ +EM + G + + +L+I L R V + +F + + C A YTALI
Sbjct: 316 HLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENM-NKKGCKANVAIYTALIDA 374
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
Y G+ ++A+ +++ M +G P T+ V++ GL K GR+ +A Y
Sbjct: 375 YGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEY 422
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 177/440 (40%), Gaps = 63/440 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F +S GF D++T+ +++ + + V ++M +G + D TY
Sbjct: 281 IEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYN 340
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L G+VD AV + +M ++C P V+Y + L ++V+EAT + + +
Sbjct: 341 SLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGK 400
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ TY L++ L + + A+E++ +M+ G PD+ N+LI+ C G+ +
Sbjct: 401 GILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEA 460
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ +L+ M+ + A + + F
Sbjct: 461 LNLLKEMEVSGCARNVITYNTLIDGF---------------------------------- 486
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
K K + + + + + + +S +T+I+ C R + A
Sbjct: 487 ---------------CKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEAS 531
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+ + L ++ Y +L+ K K A+IV+ M G + LI L
Sbjct: 532 QLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGL 591
Query: 406 GSARRPVPAAKIF--------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
A R A K+ +L P Y +I F + +A+++++ M K
Sbjct: 592 CKAGRVEAATKLLRTIQMKGINLTPH------AYNPVIQALFRRKRSKEAVRLFREMIEK 645
Query: 458 GIHPSLGTFNVLLAGLEKLG 477
P T+ ++ GL + G
Sbjct: 646 AEAPDAVTYKIVFRGLCQGG 665
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 175/431 (40%), Gaps = 25/431 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG D T+ ++ A +I + E M++ G+ D T+T++M G++D
Sbjct: 188 SRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLD 247
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM-IQRGLPPNCYTYTVL 177
GA+ + E+M C T V+ + R++EA +EM ++ G P+ YT+ +L
Sbjct: 248 GAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNML 307
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L + G + ALE+ M G PD N LI CK GE + +L M E
Sbjct: 308 VNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDC 367
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ + + T + EN QV + + D+ S+ QGL
Sbjct: 368 SPNTVTYNTIIST--LCKEN-----QVEEATKLALVLTGKG---ILPDVCTYNSLIQGLC 417
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L + + VA++ L + K D + +I+ C + AL +
Sbjct: 418 ---LSRNHTVAME-LYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCA 473
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y LI K + EI ++M G S LI L + R A+++
Sbjct: 474 RNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQL 533
Query: 418 F------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
L P+ TY +L+ + AG KA I +TM G P + T+ L+A
Sbjct: 534 MDQMIMEGLRPDK----FTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIA 589
Query: 472 GLEKLGRVSDA 482
GL K GRV A
Sbjct: 590 GLCKAGRVEAA 600
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 115/524 (21%), Positives = 192/524 (36%), Gaps = 86/524 (16%)
Query: 12 LKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFF--------NWVSRSRGFN 63
LKY TW + + L +H P + L F + S
Sbjct: 7 LKYHTW----------------FPFHHHLASHKPTSNSTLSFATTNHEPLTTTTNSATRL 50
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFE-LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
FT T +L + S++ ++F ++ + + V+H L AG+ D +
Sbjct: 51 SPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKD 110
Query: 123 IWEEMKLK-------------ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
I +EMK+ E Y S+ Y +IL D ++ ++ G+
Sbjct: 111 ILKEMKISLSVIDNDSLLVFIESY---ASFGLYNEILQFVDAME---------VEFGVVA 158
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
N + Y L+ LV K + S M G++PD + NILI+ C+A + R IL++
Sbjct: 159 NTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLM 218
Query: 230 RYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-------------------FSP 270
M++ L F +Q F + + N +V Q F
Sbjct: 219 EEMEDFGLLPDEKTFTTIMQGF-IEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCK 277
Query: 271 E--------FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
E FI + E D + GL K L +D +L D I
Sbjct: 278 EGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIY 337
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+++IS + C D A+ ++ D + Y +I L K N + ++
Sbjct: 338 TYNSLISGL----CKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYF 439
+T G V LI L +R A +++ + + + C TY LI
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEM-KTKGCHPDEFTYNMLIDSLC 452
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G +AL + K M G ++ T+N L+ G K R+++AE
Sbjct: 453 FRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAE 496
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 36/157 (22%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D+FTY ++L F +A I + + M G D VTY +++ L AG V+ A
Sbjct: 541 GLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAA 600
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE------------------- 161
+ +++K T +Y ++ LF R KEA +++E
Sbjct: 601 TKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRG 660
Query: 162 -----------------MIQRGLPPNCYTYTVLMEYL 181
M++RG P ++ +L E L
Sbjct: 661 LCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGL 697
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 186/440 (42%), Gaps = 27/440 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++D +A+ + K VF+ M +KG+ + TYT ++H + G V + +EM
Sbjct: 204 TYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEM 263
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P V Y + L N R EA +++ +I++G+ P+ Y +L+ G
Sbjct: 264 STHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGAL 323
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVF 244
E M GV PD NI+ K + I M++ L+ + Y
Sbjct: 324 SEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGAL 383
Query: 245 KEALQTFKVADENDSLL---WQVHPQFSPE-FISDNDAVEFVTTDIEGPLS------IDQ 294
+AL K+ +D++L ++ +P+ F+ + T D +DQ
Sbjct: 384 IDAL--CKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQ 441
Query: 295 G----------LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
G L+ L ++ ++ L+ ++ ++ D +T+++ +C R D A
Sbjct: 442 GIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEA 501
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
+ V + L + Y L+ K + EM G + GV ++H
Sbjct: 502 AKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHG 561
Query: 405 LGSARRPVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L R A +++ +++ +KC TYT ++ D+A K+++++C K +
Sbjct: 562 LFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLD 621
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
+ T N+++ L K GR DA
Sbjct: 622 IFTINIMIGALLKGGRKEDA 641
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 185/447 (41%), Gaps = 66/447 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINI---DAVTYTSVMHWLSNAGDVDGAVNIW 124
+Y +L KR + +M + G + VTYT+V+ L A VD A ++
Sbjct: 166 SYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVF 225
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M K P +YT + + KE + +EM GL P+C Y VL++YL +
Sbjct: 226 QHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKN 285
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ EA IF + G++P IL+ G + L M N ++ + +F
Sbjct: 286 GRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIF 345
Query: 245 KEALQTF---KVADENDSLLWQVHPQF-SPEFIS-------------DNDAV-------- 279
+ + DE + ++ Q+ SP ++ +DAV
Sbjct: 346 NIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMIN 405
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
E VT DI S+ GL + +K + L ++D+ I+L++A + ++ C
Sbjct: 406 EGVTPDIFVFSSLVYGLCTVDKWEK----AEKLFFEVLDQGIRLNAAFFNILMCNLC--- 458
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R+G ++ + LI ++++++ P V I GH
Sbjct: 459 -REGRVMEAQ---------------RLIDLMLRVDVRPDV--ISYNTLVDGHC------- 493
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L R+ A + + L P++ TY L+ Y A D A +++ M KG+
Sbjct: 494 -LTGRIDEAAKLLDVMVSIGLKPDE----FTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA-EIY 485
P + T+N +L GL ++GR +A E+Y
Sbjct: 549 TPGVVTYNTILHGLFQIGRFCEAKELY 575
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+ + ++ D + N ++ H +++A + V S G D FTY T+L + +
Sbjct: 471 DLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLD-VMVSIGLKPDEFTYNTLLHGYCK 529
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A+RI +F M KG+ VTY +++H L G A ++ M I +
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYT 589
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YT + L N+ V EA +++ + + L + +T +++ L++ G+ E+A+++F+ +
Sbjct: 590 YTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATIS 649
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G+ PD ++ E K G + + M+EN A
Sbjct: 650 AYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTA 689
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/464 (20%), Positives = 178/464 (38%), Gaps = 90/464 (19%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD-- 116
+ G D Y +LD + R + + +F+ + KGI Y ++H + G
Sbjct: 265 THGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALS 324
Query: 117 ---------------------------------VDGAVNIWEEMKLKECYPTIVSYTAYM 143
+D A++I+++M+ + P +V+Y A +
Sbjct: 325 EMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALI 384
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
L RV +A + +MI G+ P+ + ++ L+ L K+E+A ++F ++ + G++
Sbjct: 385 DALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIR 444
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
+ A NIL+ C+ G R M+ RL L+ +
Sbjct: 445 LNAAFFNILMCNLCREG---------RVMEAQRLI--------------------DLMLR 475
Query: 264 VHPQFSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V + P+ IS N V+ +T I+ + +V I LK
Sbjct: 476 VDVR--PDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKP------------------ 515
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
D +T++ C RR D A F + L Y ++ L ++ F + E
Sbjct: 516 --DEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKE 573
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPED-QKCTATYTALIGVYF 439
+ M +Y ++++ L A K+F SL +D Q T +IG
Sbjct: 574 LYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALL 633
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G + A+ ++ T+ G+ P + T+ ++ L K G + + +
Sbjct: 634 KGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELD 677
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 42 THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDA 101
T + + F + + R+ G + D + M + + + I ++F+ M+++ ++
Sbjct: 319 TEGALSEMHSFLDLMVRN-GVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGV 377
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
V Y +++ L G VD AV + +M + P I +++ + L D+ ++A ++ E
Sbjct: 378 VNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFE 437
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ +G+ N + +LM L R G+ EA + M V+PD + N L++ C G
Sbjct: 438 VLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGR 497
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 7/182 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A L FN + + G D F +++++ + + +F + ++GI ++A +
Sbjct: 393 VDDAVLKFNQMI-NEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+M L G V A + + M + P ++SY + L R+ EA + M+
Sbjct: 452 ILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI 511
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL------IEKCCKA 219
GL P+ +TY L+ +A + ++A +F +M G+ P N + I + C+A
Sbjct: 512 GLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEA 571
Query: 220 GE 221
E
Sbjct: 572 KE 573
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 37/168 (22%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E L+ N ++ R D +TYT +L+ + +F+ + K + +D T
Sbjct: 570 EAKELYLNMINNRR--KCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINI 627
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L G R ++A D++ + G
Sbjct: 628 MIGALLKGG-----------------------------------RKEDAMDLFATISAYG 652
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
L P+ TY ++ E L++ G EE E+FS M+E G P+ N L+
Sbjct: 653 LVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVR 700
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 203/463 (43%), Gaps = 28/463 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA FN + + RG + D TY +++ +A+ + + + M +KG+ D TY
Sbjct: 232 VNKACDLFNEMVQ-RGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYN 290
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+++ S+ G AV + ++M + P +V+ + M L + ++K+A DV+ M +
Sbjct: 291 SLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMK 350
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G + ++Y +++ G + E+F+ M G+ PD N+LI+ K G
Sbjct: 351 GQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRA 410
Query: 226 ILILRYMKENRL---ALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+I M+E + + Y AL + K+ D + + +P + + ++
Sbjct: 411 TIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQG 470
Query: 282 VTTDIEGPLSIDQGLVLILLKK-------------KNLVAIDSLLSG--IMDKSIQL--- 323
T G L + LVL ++ K NL + ++ I D +I +
Sbjct: 471 FCT--HGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLH 528
Query: 324 -DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+ V +T+++ C + + AL F+ V + Y L+ K+ + +
Sbjct: 529 PNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSL 588
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALIGVYFS 440
E+ G L +++H L A R VPA F + E TY+ ++G F
Sbjct: 589 FREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFK 648
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+D+A+ ++K + + + T N+++AG+ ++ RV +A+
Sbjct: 649 NSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAK 691
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 187/473 (39%), Gaps = 38/473 (8%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINI 99
+ H P + FF V ++ G D + +L EAKR + ++ + M G
Sbjct: 120 RAHRP-KLTLAFFGQVLKT-GLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVP 177
Query: 100 DAVTYTSVMHWLSN---AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
D +Y V+ L + +G D + + E C P V+Y + F V +A
Sbjct: 178 DVFSYCIVLKSLCSDRKSGQADELLRMMAEGG-AVCLPNAVAYNTVIDGFFKEGDVNKAC 236
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
D++ EM+QRG+ P+ TY ++ L +A ++A I +M + GV PD N LI
Sbjct: 237 DLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGY 296
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADEND-----SLLWQVHPQ 267
G+ + + + + M + + + K+ D D ++ Q
Sbjct: 297 SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDI 356
Query: 268 FSPEFISDN--------DAVEFVTTDIEGPLSIDQGLVLILLK---KKNLVAIDSLLSGI 316
FS + + + D E + ++ D + +L+K K ++ +++
Sbjct: 357 FSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNE 416
Query: 317 M-DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
M ++ ++ D ST+I C + D A+ F + + + Y LI
Sbjct: 417 MREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGD 476
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTA 429
K ++V +M G + +I+ L R + A IF L P
Sbjct: 477 LLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPN----VM 532
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y L+ Y G + AL+++ M GI P++ + L+ G K+GR+ +
Sbjct: 533 VYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEG 585
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G Y +L +A R K F M E GI +D TY+ V+ L D
Sbjct: 595 KGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDE 654
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++E+ I + + +F RV+EA D++ + + GL P+ TY+++M
Sbjct: 655 AILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMT 714
Query: 180 YLVRAGKYEEALEIFSKMQEAGV-QPDKAACNILIEK 215
L++ G EEA ++FS M+ AG QP+ N ++ +
Sbjct: 715 NLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRE 751
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 188/453 (41%), Gaps = 34/453 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A+ +N + +G D Y+ +++ A ++ +F + +G+ +D V ++
Sbjct: 291 LDEAFSLYNLMIE-KGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFS 349
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+M GD+ A+ ++ M + P +V+Y+ + L N RV EA V+ +++++
Sbjct: 350 SIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQ 409
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ TY+ L++ ++ + ++ M G PD C++LI + G
Sbjct: 410 GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEA 469
Query: 226 ILILRYMKENRLALRYPVFKEALQ-TFKVADENDSL-------LWQVHPQFSPEFISDND 277
+ + L L +F + F++ D L +++V P D
Sbjct: 470 LRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIP----------D 519
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
V + LV L ++ L +L ++ K D + T+I+ C
Sbjct: 520 VVTYTV------------LVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCK 567
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
R L F+ + + Y LI + + V E++ E+ K G +
Sbjct: 568 KRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVT 627
Query: 398 GALLIHRLGSARRPVPAAKIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
+I S + A K+F +L Q T+T LI Y G D A+ I+ +M
Sbjct: 628 YNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSML 687
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
+G P++ T++ L+ G K A E+Y K
Sbjct: 688 ERGPEPNILTYSCLIDGYFKTENTESAFELYEK 720
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 195/458 (42%), Gaps = 26/458 (5%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +N + + E LF ++ +RG D +++++D + + V+ M
Sbjct: 314 SILINGLFRAGKLEEGNSLF--SMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRM 371
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
++GI+ + VTY+ +++ L G V A ++ ++ + P++++Y++ + ++ +
Sbjct: 372 LKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENL 431
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++ +Y M+++G P+ ++L+ L R G +EAL F + + G+ + N L
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491
Query: 213 IEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-F 268
I+ C + TR + + M ++ + Y V + L DE +L +Q+ + F
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
SP+ I T I+G KK++ + + I D +
Sbjct: 552 SPDHI-------IYCTLIDG-----------FCKKRDPATGLQIFKLMQSNGIFPDICIY 593
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ +I + + L +K L + Y +I L F K ++ E +
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKC 653
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADK 446
+LI R A IFS + E + TY+ LI YF + +
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
A ++Y+ M + P++ ++++L+ GL K G + +A +
Sbjct: 714 AFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASL 751
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 104/502 (20%), Positives = 206/502 (41%), Gaps = 78/502 (15%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A F W+S+ G + + + MLD+ ++ RI + +E M KG+ + Y
Sbjct: 156 VDRAVDTFAWMSK-MGVSISHYAASEMLDLLIDSDRIDVILENYEEMC-KGLGV----YE 209
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
V + G+V+ +N + + P IV +K L + +++ A+D + M++
Sbjct: 210 FVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRS 269
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN T++ L+ + + +EA +++ M E G+ PD +ILI +AG+
Sbjct: 270 GPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEG 329
Query: 226 ILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDN-------- 276
+ + + +F + + +V D ++ +V+ + E IS N
Sbjct: 330 NSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAI--EVYTRMLKEGISPNVVTYSILI 387
Query: 277 -------------------------DAVEFVTTDIEGPLSIDQ-----GLVLILLKKKNL 306
+V ++ I+G + GL I+L+K ++
Sbjct: 388 NGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV 447
Query: 307 --VAIDSLL------SGIMDKSIQ-----------LDSAVISTIIEVNCDH--RRRDGA- 344
V + S+L G+MD++++ L++ + + +I+ C R RDG
Sbjct: 448 PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID-GCFRLKRTRDGLK 506
Query: 345 --LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
+L Y V D+ Y L+ L + + + ++ K G S + LI
Sbjct: 507 MYILMGMYKVIPDV----VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562
Query: 403 HRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
R P +IF L+ + Y LI ++F G + L++ + + + G+
Sbjct: 563 DGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P + T+N ++ G L S A
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKA 644
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY TM+ + K S +FE+++ +A+T+T ++ G +D A
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I+ M + P I++Y+ + F + + A ++Y++M+ + PN +Y++L++
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDG 739
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + G EEA F + PD A ILI CK G +++ +M N + +
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI-MP 798
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSP 270
+ ++AL + D S+ V P+ SP
Sbjct: 799 DDLLQKALAEYGFQDSQASIYSTVFPE-SP 827
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 181/419 (43%), Gaps = 19/419 (4%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T+ D F +A R+ +K V++ M E G + A Y ++ L G+ D A + M
Sbjct: 12 TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM 71
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+LK ++Y+ + L +RV+EA ++ ++M R PP+ TY ++E L + +
Sbjct: 72 RLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRI 130
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
++AL +M G++PD N ++ C+ + L+ M + R+ +
Sbjct: 131 DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTL 190
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ A W++ + E + +V T++ ID KKK+LV
Sbjct: 191 INGLCKA-------WRIETAY--ELFKEMAGKGYVPTEVSYNTLIDG-----FCKKKDLV 236
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
A + ++ + + +T+I+ + A + VK + Y LI
Sbjct: 237 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 296
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
K+ + +++E+M G + V +L++ L A + A K+F + + ++C
Sbjct: 297 DGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ-RRC 355
Query: 428 ---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TY L+ D A ++Y M KG P T++ L GL + G+V +A+
Sbjct: 356 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 414
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 4/211 (1%)
Query: 29 IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK D++ N VL +E+A L F + + R N + TY T+++ +A RI +
Sbjct: 145 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR-INPNVVTYNTLINGLCKAWRIETA 203
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+F+ M KG V+Y +++ D+ A +++++M C P +V+YT +
Sbjct: 204 YELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDG 263
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + +V+ A +V M+++G+ PN TY+ L++ + + +EA ++ +M G+ P
Sbjct: 264 LSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPT 323
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENR 236
NIL+ C+A + + R M + R
Sbjct: 324 VVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 76/145 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY+ ++D F + +R+ + E M +GI VTY +++ L A ++
Sbjct: 283 KGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLED 342
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ M + C+PT+V+Y ++ L + ++ A +Y EMI +G PP+ TY L
Sbjct: 343 AFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAW 402
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQP 204
L RAGK EA E+ KM+ P
Sbjct: 403 GLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D F Y +L + +++ + +FE M ++ IN + VTY ++++ L A ++
Sbjct: 142 TRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIE 201
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++EM K PT VSY + + A DV+ +M++ PN TYT L+
Sbjct: 202 TAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 261
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ L ++GK + A E+ M + GV P+ A + LI+ CK
Sbjct: 262 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A+ F ++ +G+ +Y T++D F + K + + K VF+ M + VTYT
Sbjct: 200 IETAYELFKEMA-GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYT 258
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ LS +G V A + + M K P + +Y+ + RV EA + ++M+ +
Sbjct: 259 TLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ 318
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
G+ P TY +L+ L RA K E+A ++F M + P N L+ C
Sbjct: 319 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALC 370
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 135/328 (41%), Gaps = 25/328 (7%)
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG- 220
M R + P T+ + + +AG+ E+ E++ M EAG + ILI CK G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 221 --ETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
E ++ +R + R A+ Y L +E L+ ++ +++P DA
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPP-----DA 114
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+ + GP +V L K K + + + + + I+ D+ + + ++ C
Sbjct: 115 LTY------GP------IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQE 162
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ + A L FE VK +N Y LI L K E+ +EM G+
Sbjct: 163 EKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSY 222
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMC 455
LI + V A +F + C TYT LI +G A ++ M
Sbjct: 223 NTLIDGFCKKKDLVAAKDVFDKMVRSN-CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMV 281
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+KG+ P++ T++ L+ G K+ RV +A
Sbjct: 282 KKGVTPNVATYSCLIDGFCKVRRVDEAH 309
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 128/325 (39%), Gaps = 20/325 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +++ + KRI E M +GI DA Y V+ L V+ A ++
Sbjct: 113 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 172
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+M + P +V+Y + L R++ A +++KEM +G P +Y L++ +
Sbjct: 173 EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 232
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRY 241
A ++F KM + P+ LI+ K+G+ + +L M + + Y
Sbjct: 233 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 292
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ + DE LL Q+ ++ A VT +I L+ L
Sbjct: 293 SCLIDGFCKVRRVDEAHKLLEQM--------VTQGIAPTVVTYNI---------LLNSLC 335
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
+ L L G+ + +T++ C H++ DGA + + +
Sbjct: 336 RADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAI 395
Query: 362 AYLALIGILIKLNTFPKVAEIVEEM 386
Y L L + + E++E+M
Sbjct: 396 TYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 155/376 (41%), Gaps = 36/376 (9%)
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M L+ P ++ R+++ +VY+ M++ G Y +L+ L + G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII-LILRYMKENRLALRY- 241
++EA ++ M+ + A + +I CK E R +I + RY + AL Y
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPD--ALTYG 118
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI-- 299
P+ + +T ++ D L V + D FV + + +++ +L
Sbjct: 119 PIVERLCKTKRI----DDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 174
Query: 300 LLKKK---NLVAIDSLLSGIMDKSIQLDSAV-----------------ISTIIEVNCDHR 339
++K++ N+V ++L++G+ K+ ++++A +T+I+ C +
Sbjct: 175 MVKQRINPNVVTYNTLINGLC-KAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKK 233
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
A F+ V+ + Y LI L K AE+++ M K G + V +
Sbjct: 234 DLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYS 293
Query: 400 LLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
LI RR A K+ + TY L+ A + A K+++ M ++
Sbjct: 294 CLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 353
Query: 458 GIHPSLGTFNVLLAGL 473
HP++ T+N LL L
Sbjct: 354 RCHPTVVTYNTLLRAL 369
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 199/453 (43%), Gaps = 41/453 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG N + TY T++D F + + + V+ M +G+ ++ S+++ L G +
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ ++++ V+YT + LF + A +E++ R + P+ Y V
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L GK++EA ++M+ G++PD++ N +I C+ GET + +L MK + +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVE------------- 280
+ Y L ++ LL + V FSP ++ ++
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680
Query: 281 ----FVTTDIEGPLSIDQGLVLIL----LKKKNLVAIDSLL-SGIMDKSIQLDSAVISTI 331
+ + +++ L+ +L + +K V ++ +L SGI +I ++ ++
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG-- 738
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
+C D A + + +++ + L+G L + + ++ EM K+G
Sbjct: 739 ---HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSAD 445
+L G V A +++ +P+ +TY ALI + AG
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPK----VSTYNALISDFTKAGMMT 851
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+A +++K M ++G+HP+ T+++L++G L R
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWYDLAR 884
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 206/465 (44%), Gaps = 41/465 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D Y T++ F A ++ + + V ++M+E G++ + TYT + + V+
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++E M +V+ +A + L + R EA +++EM + G PN TY L+
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L +AG+ +E L + +M GV D L++ K G+T + LR+ + L+
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVE-FVTTDIEGPLSID 293
+ Y V +AL DE + +L ++ + SP ++ + + FV + +D
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL-----LD 431
Query: 294 QGLVLILLKKK-----NLVAIDSLLSGIM-----DKSIQLDSAVISTIIEVN-------C 336
+ + K+ N+V +L+ G D ++++ ++ ++VN
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491
Query: 337 DHRRRDG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE-----MT 387
+ R++G A+ F+ + L+L+ Y LI L K P + +E M
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551
Query: 388 KAGHSLGVYLGAL-LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
V++ L ++ + A+ + + L P+ +TY +I + G K
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ----STYNTMIVSHCRKGETAK 607
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
ALK+ M I P+L T+N L+AGL G V A+ E S
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 188/462 (40%), Gaps = 68/462 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +A + + V M+EK I+ + VT++SV++ G +D A M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + P +V+Y + F A +VY +M+ G+ N + L+ L + GK
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR-YMKENRL--ALRYPVF 244
EEA+ +F +G+ D LI+ KAG+ T + M N L A+ Y VF
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 245 KEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK- 302
L E S L ++ P D + T + + L LL
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKP------DQSTYNTMIVSHCRKGETAKALKLLHE 614
Query: 303 ------KKNLVAIDSLLSGI-----MDKSIQLDSAVIST-----------IIEVNCDHRR 340
K NL+ ++L++G+ ++K+ L + ++S +++ RR
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D L E+ + L+ + T Y L+ +L K ++EEM
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM-------------- 720
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LGS P T T+ ALI + + D A Y M + I
Sbjct: 721 ----LGSGIAPD---------------TITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKD 500
P++ TFN LL GLE +GR+ +A + EK ++ + L+ D
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 24 LKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEA 79
++N+ +K D T N ++ +H KA + + S + TY T++ +FG
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS-IKPNLITYNTLVAGLFGTG 638
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ KY+ M G + ++T+ V+ S + +D ++I E M + I Y
Sbjct: 639 A-VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVY 697
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+++L + ++AT V +EM+ G+ P+ T+ L+ ++ + A +++M
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 200 AGVQPDKAACNIL---IEKCCKAGETRTIIL 227
+ P+ A N L +E + GE T+++
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLI 788
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ QVL H KA + + S G D T+ ++ ++ + + + M
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGS-GIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+ I+ + T+ +++ L + G + A + EM+ P ++Y E
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE 817
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A +Y EM+ +G P TY L+ +AG +A E+F MQ+ GV P +IL+
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 3/186 (1%)
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
++L+ + + + D ++T++ C + + D A + + L+ + LI
Sbjct: 121 AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHA-LDVIGWNTLIAGY 179
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCT 428
++ P + + MT G + V L+ A + A + ++ E
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
ATYT I Y ++A +Y+ M R G+ + T + L+AGL + GR S+A +E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299
Query: 489 KKSIQA 494
+ A
Sbjct: 300 MDKVGA 305
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 177/434 (40%), Gaps = 28/434 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTYTT+L F + + VFE M+ G + T+ +++ N G+
Sbjct: 390 KGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVE 449
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++EE+K+ EC P IV++ + + N E + V+KEM + G P T+ L+
Sbjct: 450 MMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 509
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G +++A+ I+ +M +AGV PD + N ++ + G +L MK+ R
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKP 569
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L + E + + A E + IE + + LVL+
Sbjct: 570 NELTYCSLLHAYANGKEVERM--------------SALAEEIYSGIIEPQAVLLKTLVLV 615
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR--RRDGALLAFEYSVKMDLN 357
K L + + ++ D ++ ++ + R + +L F +
Sbjct: 616 YSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPS 675
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH------RLGSARRP 411
L T Y +L+ + + F K +I+ E+ G + +I R+ A R
Sbjct: 676 L--TTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRI 733
Query: 412 VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
K F L P+ TY I Y S +A+ + K M + P+ T+N L+
Sbjct: 734 FAEMKDFGLAPD----VITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLID 789
Query: 472 GLEKLGRVSDAEIY 485
KL R +A +
Sbjct: 790 WFCKLNRRDEANSF 803
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 189/449 (42%), Gaps = 65/449 (14%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + G+ R S + ++ G++ID YTS++ ++ G AV ++++++ +
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250
Query: 132 CYPTIVSYTA----YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C PT+++Y Y K+ ++ D M G+ P+ YTY L+ R Y
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVD---SMKSSGVAPDLYTYNTLISSCRRGSLY 307
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EEA E+F +M+ AG PDK N L++ K+ R + +L+ M+ + A +
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ + D LL ++A+E + + +G+ K ++
Sbjct: 368 ISAYA----RDGLL--------------DEAMELKSQ------MVKKGI------KPDVF 397
Query: 308 AIDSLLSGIMDKSIQLDSA--VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+LLSG +K+ + D A V + C + F +KM N R ++
Sbjct: 398 TYTTLLSGF-EKTGKDDYAMKVFEEMRVAGCQPN-----ICTFNALIKMHGN--RGNFVE 449
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
++ + ++ K+ E V ++ L V+ + + + + A +PE
Sbjct: 450 MMKVFEEI----KICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA---GFVPERD 502
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
T+ LI Y G D+A+ IY+ M G+ P L T+N +LA L + G +E
Sbjct: 503 ----TFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKV 558
Query: 486 RKEKKSIQADALSKDAVPMEEKICDLLYG 514
E K D K P E C LL+
Sbjct: 559 LAEMK----DGRCK---PNELTYCSLLHA 580
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 82/157 (52%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S G D +TY T++ VFE M+ G + D VTY +++ +
Sbjct: 283 KSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRP 342
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ + +EM+ P+IV+Y + + + + EA ++ +M+++G+ P+ +TYT L
Sbjct: 343 REAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTL 402
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ + GK + A+++F +M+ AG QP+ N LI+
Sbjct: 403 LSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIK 439
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +GF+ D T M+ I+G + +S + +++ G TY S+M+ S
Sbjct: 633 REQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHF 692
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + +I E+ K P I+S+ + N R+KEA+ ++ EM GL P+ TY
Sbjct: 693 EKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTF 752
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + EA+++ M + +P++ N LI+ CK
Sbjct: 753 IASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCK 793
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 68 TYTTMLDIFGE-AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY +L+++G+ S + + + M+ G+ D TY +++ + A ++EE
Sbjct: 257 TYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEE 316
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK P V+Y A + + + R +EA +V KEM G P+ TY L+ R G
Sbjct: 317 MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGL 376
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+EA+E+ S+M + G++PD L+ K G+ + + M+
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 181/436 (41%), Gaps = 64/436 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F VS GF+ D+ T+ ++++ F ++ + + M EKG + D TY
Sbjct: 244 VEEALRFVLEVSE-EGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYN 302
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ + G+ + A+ I ++M L+EC P V+Y + L + ++ ATD+ + ++ +
Sbjct: 303 SLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSK 362
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ T+ L++ L + + A+E+F +M+ G +PD+ +ILI+ C +
Sbjct: 363 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+++L+ M+ + A V+ T
Sbjct: 423 LMLLKEMESSGCARNAVVYN--------------------------------------TL 444
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I+G L K + + + + + + S +T+I+ C ++R + A
Sbjct: 445 IDG-----------LCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEAS 493
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+ + L ++ Y +L+ ++ K +IV+ M G ++ LI L
Sbjct: 494 QLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGL 553
Query: 406 GSARRPVPAAKIFS--------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
A R A+K+ L P Y +I F + +++++ M K
Sbjct: 554 CRAGRVDVASKLLRSVQMKGIVLTPH------AYNPVIQALFMRKRTKEGMRLFREMMEK 607
Query: 458 GIHPSLGTFNVLLAGL 473
P T ++ GL
Sbjct: 608 SDPPDALTHKIVFRGL 623
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 206/518 (39%), Gaps = 33/518 (6%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
+ ++ + S++DS LLK L ++ T ++++ + + GF
Sbjct: 62 LLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFKP 121
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y L+ E ++ ++ + M +GI +D T+ ++ L A + A+ +
Sbjct: 122 DTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILML 181
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEM P +++T M+ + A + K+M+ G + VL+ +
Sbjct: 182 EEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKE 241
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
G+ EEAL ++ E G PD+ N L+ C+ G + I+ +M E Y
Sbjct: 242 GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTY 301
Query: 242 PVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ ++ +L Q + + SP ++ N + + + E + D L IL
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATD--LARIL 359
Query: 301 LKK---KNLVAIDSLLSGIM----------------DKSIQLDSAVISTIIEVNCDHRRR 341
+ K ++ ++L+ G+ +K + D S +I+ C RR
Sbjct: 360 VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 419
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
AL+ + Y LI L K EI ++M G S L
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479
Query: 402 IHRLGSARRPVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGI 459
I L +R A+++ ++ E K TY +L+ + G +KA I +TM G
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGC 539
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADAL 497
P + T+ L+ GL + GRV ++ K +S+Q +
Sbjct: 540 EPDIFTYGTLIGGLCRAGRV---DVASKLLRSVQMKGI 574
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D+FTY ++L F I + + M G D TY +++ L AG VD A
Sbjct: 503 GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVA 562
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +++K T +Y ++ LF+ R KE +++EM+++ PP+ T+ ++
Sbjct: 563 SKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRG 622
Query: 181 LVRAG-KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L G +EA++ +M E G+ P+ + L E C T+I ++ + E
Sbjct: 623 LCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVME 677
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 92/156 (58%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY +++D + + KYVF M ++G+ D YT++++ L VD A++++
Sbjct: 301 DVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLF 360
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEMK K P IV+Y + + L N ++ A + K M ++G+ P+ Y+YT+L++ L ++
Sbjct: 361 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKS 420
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G+ E+A EIF ++ G + A +LI + CKAG
Sbjct: 421 GRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAG 456
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 173/403 (42%), Gaps = 18/403 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF+ + T T++ I Y + + +G +D V+Y ++++ L G+
Sbjct: 121 RGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKA 180
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +++ P +V Y + L N + +A DVY EMI +G+ P+ TYT L+
Sbjct: 181 VARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIH 240
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G +EA + ++M+ + P+ NILI+ K G+ + ++L M + +
Sbjct: 241 GFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKP 300
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + + DE +++ + A VT D++ ++ GL
Sbjct: 301 DVFTYNSLIDGYFLVDEVK----------HAKYVFYSMAQRGVTPDVQCYTNMINGLC-- 348
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K K + SL + K++ D +++I+ C + + A+ + + + +
Sbjct: 349 --KTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPD 406
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+Y L+ L K EI + + G+ L V+ +LI+RL A A + S
Sbjct: 407 VYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKS 466
Query: 420 LLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ ED+ C T+ +I F DKA KI + M +G+
Sbjct: 467 KM-EDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 29 IKWDSYTVNQVLKTHPPMEKA----WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
IK D +T N ++ + +++ ++F++ R G D YT M++ + K +
Sbjct: 298 IKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQR--GVTPDVQCYTNMINGLCKTKMVDE 355
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+FE M+ K + D VTY S++ L ++ A+ + + MK + P + SYT +
Sbjct: 356 AMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLD 415
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L + R+++A ++++ ++ +G N + YTVL+ L +AG ++EAL++ SKM++ G P
Sbjct: 416 GLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMP 475
Query: 205 DKAACNILIEKCCKAGETRTIILILRYM 232
D +I+I + E ILR M
Sbjct: 476 DAVTFDIIIRALFEKDENDKAEKILREM 503
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 149/347 (42%), Gaps = 22/347 (6%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
K L+F+ ++GF D+ +Y T+++ + ++ + ++ + D V Y ++
Sbjct: 144 KKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI 203
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
++ L + A +++ EM +K P +V+YT + + +KEA + EM + +
Sbjct: 204 INSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNI 263
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
PN T+ +L++ L + GK +EA + + M +A ++PD N LI+ E +
Sbjct: 264 NPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKY 323
Query: 228 ILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQV-HPQFSPEFISDNDAVEFVT 283
+ M + + + + K+ DE SL ++ H P+ ++ N
Sbjct: 324 VFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSL----- 378
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
I+G L K +L +L + ++ IQ D + +++ C R +
Sbjct: 379 --IDG-----------LCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
A F+ + +L AY LI L K F + ++ +M G
Sbjct: 426 AKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKG 472
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D ++YT +LD ++ R+ K +F+ + KG +++ YT +++ L AG
Sbjct: 399 KEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFF 458
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
D A+++ +M+ K C P V++ ++ LF D +A + +EMI RGL
Sbjct: 459 DEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/391 (19%), Positives = 167/391 (42%), Gaps = 25/391 (6%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+ +++ L N ++++++ + P + + + + + A V+ ++
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+RG PN T L++ L G+ ++AL ++ G Q D+ + LI CK GET+
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+ +LR ++ + + ++ + + + LL +S E I V+ ++
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLC----KNKLLGDACDVYS-EMI-----VKGIS 229
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
D+ ++ G ++ +L SLL+ + K+I + + +I+ +
Sbjct: 230 PDVVTYTTLIHGFCIM----GHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKE 285
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A + +K + + Y +LI ++ + M + G + V +I+
Sbjct: 286 AKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMIN 345
Query: 404 RLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L + A +F +++P+ TY +LI ++A+ + K M +
Sbjct: 346 GLCKTKMVDEAMSLFEEMKHKNMIPD----IVTYNSLIDGLCKNHHLERAIALCKRMKEQ 401
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
GI P + ++ +LL GL K GR+ DA EI+++
Sbjct: 402 GIQPDVYSYTILLDGLCKSGRLEDAKEIFQR 432
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 177/434 (40%), Gaps = 31/434 (7%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
F + +L K ++ +F+ + GI D T + +++ + + A +++
Sbjct: 58 FHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFAN 117
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ + +P ++ +K L +K+A + +++ +G + +Y L+ L + G+
Sbjct: 118 ILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGE 177
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKA---GETRTII--LILRYMKENRLALRY 241
+ + K++ V+PD N +I CK G+ + +I++ + + + Y
Sbjct: 178 TKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPD--VVTY 235
Query: 242 PVFKEALQTFKVADENDSLLWQVH-PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
E SLL ++ +P + N ++ ++ EG + + L+ ++
Sbjct: 236 TTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK--EGKMKEAKILLAVM 293
Query: 301 LK---KKNLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCDHRRR 341
+K K ++ +SL+ G + + + D + +I C +
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D A+ FE ++ + Y +LI L K + + + + M + G VY +L
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTIL 413
Query: 402 IHRLGSARRPVPAAKIFS-LLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ L + R A +IF LL + YT LI AG D+AL + M KG
Sbjct: 414 LDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGC 473
Query: 460 HPSLGTFNVLLAGL 473
P TF++++ L
Sbjct: 474 MPDAVTFDIIIRAL 487
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 70/375 (18%), Positives = 133/375 (35%), Gaps = 55/375 (14%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV + M L P + + L N ++K+ G+ P+ T ++L+
Sbjct: 41 AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
A +F+ + + G P+ N LI+ C GE + + Y + +A
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKAL----YFHDQLVA- 155
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Q F++ D V + T L+
Sbjct: 156 ---------QGFQL-----------------------DQVSYGT------------LING 171
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K A+ LL + S++ D + +TII C ++ A + + ++ +
Sbjct: 172 LCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPD 231
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI + + ++ EM + V +LI L + A + +
Sbjct: 232 VVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLA 291
Query: 420 LLPEDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++ + C TY +LI YF A ++ +M ++G+ P + + ++ GL K
Sbjct: 292 VMM--KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCK 349
Query: 476 LGRVSDAEIYRKEKK 490
V +A +E K
Sbjct: 350 TKMVDEAMSLFEEMK 364
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 196/454 (43%), Gaps = 30/454 (6%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK-YVFEL-M 92
TV Q L KA FFNW ++ G+ H +Y +ML+I G + +++ + ++F +
Sbjct: 81 TVLQTLGFLRDTSKALQFFNW-AQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 93 QEKGI-NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ +GI ++A + S+M + AG ++ ++ MK P++V++ + + IL R
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGR 199
Query: 152 VKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
A VY EM+ G+ P+ +T+ +L+ G ++ IF+ + G +PD N
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPV--FKEALQTFKVADENDSLLWQVHPQF 268
L++ C+AG+ +++ M + + L V + ++ + E + L
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMV 319
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM-DKSIQLDSAV 327
+ ++N T I+G L + + I +L G D + D+
Sbjct: 320 NQGLKANNIT---YNTLIKG-----------LCEARKFEKIKDILEGTAGDGTFSPDTCT 365
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T++ +C D AL FE ++ + + Y AL+ L + + K ++++++
Sbjct: 366 FNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLL 425
Query: 388 K-----AGHSLGVYLGAL--LIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTALIGVYF 439
+ +G + A + L + A K F L+ + +Y LI +
Sbjct: 426 ERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHC 485
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
G+ + ++ M RK P T+ L+ GL
Sbjct: 486 KEGTFESGYELLVLMLRKDFXPDFETYESLINGL 519
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 185/466 (39%), Gaps = 51/466 (10%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S N + TYTT++ + + I VFE M +G+ + +TY +++ L A
Sbjct: 284 KSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKF 343
Query: 118 DGAVNIWEEMKLKECY-PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ +I E + P ++ M + +A V++ M + + P+ TY+
Sbjct: 344 EKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSA 403
Query: 177 LMEYLVRAGKYEEALEIFSKMQEA-------GVQPDKAACNILIEKCCKAGETRTIILIL 229
L+ L + G YE+A ++ K+ E G +P AA N + + C+ G+T+
Sbjct: 404 LVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAF 463
Query: 230 RYMKENRLALRYPVFKEALQ------TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
R + R P +K + TF+ E L+ + F P+F E
Sbjct: 464 RQLMR-RGTQDPPSYKTLIMGHCKEGTFESGYE--LLVLMLRKDFXPDF-------ETYE 513
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ I G L +D K L+A+ S L ++ S + +S+ +I+ + R
Sbjct: 514 SLINGLLHMD----------KPLLALQS-LEKMLRSSHRPNSSTFHSILAKLLEQGRASE 562
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
+ + + ++ + + +L K ++V + G+S+ + LI
Sbjct: 563 SASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKM---EELIR 619
Query: 404 RLGSARRPVPAAKIFSLLPEDQK------CTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L R+ + +K+ E + C L + +A +Y +
Sbjct: 620 YLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEI----NKLSEAFSLYYKLVEM 675
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
G+H L N L L+ G++ +AE +K ++ SK++ P
Sbjct: 676 GVHQQLSCQNQLKVSLKAGGKLEEAESVQKR---MERRLKSKNSNP 718
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 189/479 (39%), Gaps = 81/479 (16%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++D + R S + +F MQEKGI D TY S++ ++G A + +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++ P +V+Y A + + EA ++Y EM+ RG+ PN TY+ +++ + + +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A +F M G P+ N LI+ C A + +L M E L + +
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
F + + ++ L + S D +V
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPD------------------------------IVT 467
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT------- 361
D+LL G+ CD+ + AL F+ K +L+ +
Sbjct: 468 CDTLLDGL-------------------CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 362 ----AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y LI LI F + E+ EEM G + +I L R A ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + T+T LI Y AG D L+++ M R+GI + T+ L+ G K
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 476 LGRVSDA-EIYRKEKKS-IQADALS--------------KDAVPMEEKI---CDLLYGG 515
+G ++ A +I+++ S + D ++ K AV M EK+ DL +GG
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFGG 687
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/475 (20%), Positives = 191/475 (40%), Gaps = 60/475 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ + RSR + ++ + +R + +++ M+ K I D ++T
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFT 118
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + + A++ + ++ +P +V++ + L + DRV EA +++ +M +
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN T+T LM L R G+ EA+ + +M E G+QP + +++ CK G+T +
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 226 ILILRYMKE-----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN---- 276
+ +LR M+E + + + + + +D + P+ + N
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 277 ---------DAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
DA + + +E +S D L+ +K+ + L ++ + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
++ S++I+ C R D A F + + LI E++
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
EMT+ G L D T TY LI ++ G
Sbjct: 419 HEMTETG------------------------------LVAD---TTTYNTLIHGFYLVGD 445
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA----EIYRKEKKSIQA 494
+ AL + + M G+ P + T + LL GL G++ DA ++ +K KK + A
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 163/429 (37%), Gaps = 62/429 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D FTY +M+ F + R S + + + M E+ I+ D VTY ++++ G
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +++EM + P ++Y++ + +R+ A ++ M +G PN T+ L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ A + ++ +E+ +M E G+ D N LI G+ + +L+ M + L
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 238 A-------------LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
K+AL+ FKV ++ L HP
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP----------------FN 505
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+E + L+ L+ + + + L + + I D+ S++I+ C R D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F+ + + LI K E+ EM
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM------------------ 607
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
RR + A I TY LI + G+ + AL I++ M G++P
Sbjct: 608 ---GRRGIVANAI------------TYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652
Query: 465 TFNVLLAGL 473
T +L GL
Sbjct: 653 TIRNMLTGL 661
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ ++G + + T+ T++D + AKRI + M E G+ D TY +++H
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ---------- 164
GD++ A+++ +EM P IV+ + L N ++K+A +++K M +
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 165 -RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G+ P+ TY +L+ L+ GK+ EA E++ +M G+ PD + +I+ CK
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
D+ + L+ M+K+ + G D TY ++ + + ++E
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +GI D +TY+S++ L +D A +++ M K P +V++T + R
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
V + +++ EM +RG+ N TY L+ + G AL+IF +M +GV PD
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 155/396 (39%), Gaps = 61/396 (15%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E G +++ S H + D A++++ +M P++V + M ++ +R
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLED---AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD 96
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+Y++M ++ + + Y++T+L++ K AL F K+ + G+ PD N L+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLL 156
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
C E+R++ EAL F H F E
Sbjct: 157 HGLC---------------VEDRVS-------EALNLF-------------HQMF--ETT 179
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ V F T L+ L ++ +V +LL +M+ +Q TI++
Sbjct: 180 CRPNVVTFTT------------LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
Query: 334 VNCDHRRRDGALLAFEYSVKMD----LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C ++ + A KM+ + Y A+I L K + EM +
Sbjct: 228 GMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKA 447
G ++ +I S+ R A ++ + E + TY ALI + G +A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++Y M +GI P+ T++ ++ G K R+ AE
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M+D + R+ +F+ M K + + VT+T++++ AG VD
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y + + A D+++EMI G+ P+ T ++
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + + A+ + K+Q
Sbjct: 660 GLWSKEELKRAVAMLEKLQ 678
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 20 AQDLLKNLP---IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A++L + +P I D+ T + + L +++A F+ + S+ F+ + T+TT++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG-SKSFSPNVVTFTTLI 588
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ + +A R+ +F M +GI +A+TY +++ G+++GA++I++EM Y
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEM 162
P ++ + L+ + +K A + +++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 189/479 (39%), Gaps = 81/479 (16%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++D + R S + +F MQEKGI D TY S++ ++G A + +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++ P +V+Y A + + EA ++Y EM+ RG+ PN TY+ +++ + + +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A +F M G P+ N LI+ C A + +L M E L + +
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
F + + ++ L + S D +V
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPD------------------------------IVT 467
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT------- 361
D+LL G+ CD+ + AL F+ K +L+ +
Sbjct: 468 CDTLLDGL-------------------CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 362 ----AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y LI LI F + E+ EEM G + +I L R A ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + T+T LI Y AG D L+++ M R+GI + T+ L+ G K
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 476 LGRVSDA-EIYRKEKKS-IQADALS--------------KDAVPMEEKI---CDLLYGG 515
+G ++ A +I+++ S + D ++ K AV M EK+ DL +GG
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFGG 687
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/475 (20%), Positives = 191/475 (40%), Gaps = 60/475 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ + RSR + ++ + +R + +++ M+ K I D ++
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFN 118
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + + A++ + ++ +P +V++T + L + DRV EA +++ +M +
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN T+T LM L R G+ EA+ + +M E G+QP + +++ CK G+T +
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 226 ILILRYMKE-----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN---- 276
+ +LR M+E + + + + + +D + P+ + N
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 277 ---------DAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
DA + + +E +S D L+ +K+ + L ++ + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
++ S++I+ C R D A F + + LI E++
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
EMT+ G L D T TY LI ++ G
Sbjct: 419 HEMTETG------------------------------LVAD---TTTYNTLIHGFYLVGD 445
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA----EIYRKEKKSIQA 494
+ AL + + M G+ P + T + LL GL G++ DA ++ +K KK + A
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 163/429 (37%), Gaps = 62/429 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D FTY +M+ F + R S + + + M E+ I+ D VTY ++++ G
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +++EM + P ++Y++ + +R+ A ++ M +G PN T+ L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ A + ++ +E+ +M E G+ D N LI G+ + +L+ M + L
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 238 A-------------LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
K+AL+ FKV ++ L HP
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP----------------FN 505
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+E + L+ L+ + + + L + + I D+ S++I+ C R D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F+ + + LI K E+ EM
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM------------------ 607
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
RR + A I TY LI + G+ + AL I++ M G++P
Sbjct: 608 ---GRRGIVANAI------------TYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652
Query: 465 TFNVLLAGL 473
T +L GL
Sbjct: 653 TIRNMLTGL 661
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ ++G + + T+ T++D + AKRI + M E G+ D TY +++H
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ---------- 164
GD++ A+++ +EM P IV+ + L N ++K+A +++K M +
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 165 -RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G+ P+ TY +L+ L+ GK+ EA E++ +M G+ PD + +I+ CK
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
D+ + L+ M+K+ + G D TY ++ + + ++E
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +GI D +TY+S++ L +D A +++ M K P +V++T + R
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
V + +++ EM +RG+ N TY L+ + G AL+IF +M +GV PD
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M+D + R+ +F+ M K + + VT+T++++ AG VD
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y + + A D+++EMI G+ P+ T ++
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + + A+ + K+Q
Sbjct: 660 GLWSKEELKRAVAMLEKLQ 678
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 153/396 (38%), Gaps = 61/396 (15%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E G +++ S H + D A++++ +M P++V + M ++ +R
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLED---AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD 96
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+Y++M ++ + + Y++ +L++ K AL F K+ + G+ PD L+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLL 156
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
C E+R++ EAL F H F E
Sbjct: 157 HGLC---------------VEDRVS-------EALNLF-------------HQMF--ETT 179
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ V F T L+ L ++ +V +LL +M+ +Q TI++
Sbjct: 180 CRPNVVTFTT------------LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
Query: 334 VNCDHRRRDGALLAFEYSVKMD----LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C ++ + A KM+ + Y A+I L K + EM +
Sbjct: 228 GMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKA 447
G ++ +I S+ R A ++ + E + TY ALI + G +A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++Y M +GI P+ T++ ++ G K R+ AE
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 20 AQDLLKNLP---IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A++L + +P I D+ T + + L +++A F+ + S+ F+ + T+TT++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG-SKSFSPNVVTFTTLI 588
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ + +A R+ +F M +GI +A+TY +++ G+++GA++I++EM Y
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEM 162
P ++ + L+ + +K A + +++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 191/476 (40%), Gaps = 61/476 (12%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ--------------- 93
A+ +FN V+ H T ML+I +R+ M VF LMQ
Sbjct: 107 AFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIF 166
Query: 94 --------------------EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
E G +++A +Y ++H L +G A+ ++ M L+
Sbjct: 167 KGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLK 226
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P++ +++A M + + +EM GL PN YTYT+ + L RAG+ +EA I
Sbjct: 227 PSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRI 286
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
+M++ G PD +LI+ C AG+ + + MK + + L F
Sbjct: 287 MKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKF-- 344
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
+D D L +V +F E +D A + +T I LV L K N+ LL
Sbjct: 345 SDCGD--LGRVK-EFWSEMEADGYAPDVITFTI---------LVNALCKAGNIDEAFHLL 392
Query: 314 SGIMDK-----SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+M K ++ + +IS ++ VN R D AL F + + Y+ I
Sbjct: 393 D-VMRKQGVLPNLHTYNTLISGLLRVN----RLDDALDLFNNMETLGVVPTAYTYILFID 447
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC- 427
K K E E+M G + + ++ L R A IF+ L +
Sbjct: 448 FYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAP 507
Query: 428 -TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ TY ++ Y AG D+A+++ M P + N L+ L K GRV +A
Sbjct: 508 DSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 204/516 (39%), Gaps = 57/516 (11%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS----------- 59
+L+ + D A DL N+ + L P LF ++ +S
Sbjct: 414 LLRVNRLDDALDLFNNM----------ETLGVVPTAYTYILFIDFYGKSGRSDKALETFE 463
Query: 60 ----RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
RG + L E R+ K +F ++ G+ D+VTY +M S AG
Sbjct: 464 KMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAG 523
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
VD A+ + +M +C P I+ + + L+ RV EA ++ + L P TY
Sbjct: 524 QVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYN 583
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ L + G+ + A+E+F+ M G P+ N +++ CK E + +L M
Sbjct: 584 TLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTM 643
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVH---PQFSPEFISDNDAVEFVTTD--IEGPL 290
F + + +W H +P+ ++ + V + +E
Sbjct: 644 NCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAF 703
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIM-----DKSIQL-----------DSAVISTIIEV 334
I + V L + + L+ GI+ +K+I D +V+ II+V
Sbjct: 704 KIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKV 763
Query: 335 NCDHRRRDGALLAF-EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C H++ A F ++ ++ + +Y LI + ++ + EM AG +
Sbjct: 764 LCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAP 823
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC------TATYTALIGVYFSAGSADKA 447
V+ LL+ G + + ++F L E C T T+ +I + S DKA
Sbjct: 824 DVFTYNLLLDAHGKSGK---INELFELY-EQMICSSCKPNTITHNIIIANLVKSNSLDKA 879
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
L ++ + P+ T+ LL GL K GR+ +A+
Sbjct: 880 LDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAK 915
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 116/233 (49%), Gaps = 11/233 (4%)
Query: 8 VYKILKYSTWDSAQDLLKNL--------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS 59
+ ++K ++ D A DL +L P + ++ +LK+ E LF V
Sbjct: 867 IANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL-LDGLLKSGRLEEAKELFEEMVDY- 924
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + Y +++ FG+ +++ +F+ M +GI D +YTS++ L AG VD
Sbjct: 925 -GCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDD 983
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++ +E++K Y ++Y + L + R++EA +Y EM RG+ P+ +TY L+
Sbjct: 984 ALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLIL 1043
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L AG E+A +++ ++Q G++P+ N LI +G + + + + M
Sbjct: 1044 NLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 96/193 (49%), Gaps = 1/193 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E AW F + ++ G D FTY +LD G++ +I+ + ++E M + +T+
Sbjct: 807 EMAWNLFTEM-KNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNI 865
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L + +D A++++ ++ + PT +Y + L + R++EA ++++EM+ G
Sbjct: 866 IIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
PN Y +L+ + G A E+F +M G++PD + L+ C+AG +
Sbjct: 926 CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDAL 985
Query: 227 LILRYMKENRLAL 239
+K+ L L
Sbjct: 986 HYFEKLKQTGLYL 998
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V R +G + TY T++ R+ +F M+ G+ A TY + + +G
Sbjct: 394 VMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSG 453
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D A+ +E+MK++ P IV+ A + L R++EA ++ + GL P+ TY
Sbjct: 454 RSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYN 513
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++M+ +AG+ +EA+E+ S M E +PD N LI KAG + +K+
Sbjct: 514 MMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDM 573
Query: 236 RLA 238
+LA
Sbjct: 574 KLA 576
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 77/148 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +YT+++ EA R+ + FE +++ G+ +D++ Y ++ L + ++ A
Sbjct: 960 GIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEA 1019
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +++EM+ + P + +Y + + L + V++A +Y+E+ GL PN +TY L+
Sbjct: 1020 LTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRG 1079
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+G + A ++ +M G P+
Sbjct: 1080 YSMSGNSDSAYAVYKRMMVGGCSPNTGT 1107
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/468 (19%), Positives = 186/468 (39%), Gaps = 64/468 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++ G+ ++ +F M G + +T+ +++ L +VD A+ + +M
Sbjct: 581 TYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM 640
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C P ++++ + L + RV +A ++ +M ++ L P+C T L+ +V+ G
Sbjct: 641 TTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLM 699
Query: 188 EEALEIFSK---------------------MQEAGVQP-----DKAACNILIEKCCKAGE 221
E+A +I + +AG + D+ C + CK G
Sbjct: 700 EDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCG----RVCKDGS 755
Query: 222 TRTIILILRYMKENRLAL-RYPVF---------KEALQTFKVADE------NDSLLWQVH 265
++ I++ + +++ AL VF K L+++ E ND + W +
Sbjct: 756 V--LMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLF 813
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
+ + + + D G K + + L ++ S + ++
Sbjct: 814 TEMKNAGCAPDVFTYNLLLDAHG-------------KSGKINELFELYEQMICSSCKPNT 860
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ II D AL F V D + Y L+ L+K + E+ EE
Sbjct: 861 ITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEE 920
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGS 443
M G + +LI+ G A ++F + + + +YT+L+G AG
Sbjct: 921 MVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGR 980
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
D AL ++ + + G++ +N+++ GL + R+ +A E +S
Sbjct: 981 VDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQS 1028
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 151/376 (40%), Gaps = 51/376 (13%)
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+E G+ +Y ++ + + A N++ EMK C P + +Y + + ++
Sbjct: 782 KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
E ++Y++MI PN T+ +++ LV++ ++AL++F + P L
Sbjct: 842 NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
++ K+G RL +F+E + + P
Sbjct: 902 LDGLLKSG---------------RLEEAKELFEEMVD------------YGCRP------ 928
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
N+A+ + + G K ++ L ++ + I+ D ++++
Sbjct: 929 ---NNAIYNILINGFG-------------KTGDVNTACELFKRMVREGIRPDLKSYTSLV 972
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C+ R D AL FE + L L+ AY +I L + + + + +EM G +
Sbjct: 973 GCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGIN 1032
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKI 450
++ LI LG A A K++ L + TY ALI Y +G++D A +
Sbjct: 1033 PDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAV 1092
Query: 451 YKTMCRKGIHPSLGTF 466
YK M G P+ GTF
Sbjct: 1093 YKRMMVGGCSPNTGTF 1108
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D Y M+D G + RI +++ MQ +GIN D TY S++ L AG V
Sbjct: 992 KQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMV 1051
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++EE++ P + +Y A ++ ++ A VYK M+ G PN T+ L
Sbjct: 1052 EQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 140/357 (39%), Gaps = 52/357 (14%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
PT+ SY ++ + A +++ EM G P+ +TY +L++ ++GK E E+
Sbjct: 788 PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFEL 847
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
+ +M + +P+ NI+I K+ + L L Y +
Sbjct: 848 YEQMICSSCKPNTITHNIIIANLVKSNSL-----------DKALDLFYDL---------- 886
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
V FSP T GPL +D LLK L L
Sbjct: 887 ----------VSGDFSP------------TPCTYGPL-LDG-----LLKSGRLEEAKELF 918
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
++D + ++A+ + +I + A F+ V+ + + +Y +L+G L +
Sbjct: 919 EEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEA 978
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATY 431
E++ + G L L+I LG + R A ++ + TY
Sbjct: 979 GRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTY 1038
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
+LI AG ++A K+Y+ + G+ P++ T+N L+ G G A +Y++
Sbjct: 1039 NSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKR 1095
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAG-----HSLGVYLGALL-IHRLGSARRPVPAA 415
+ L+ L K + +++ M K G H+ + LL ++RL A
Sbjct: 371 TFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNM 430
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ ++P TY I Y +G +DKAL+ ++ M +GI P++ N L L +
Sbjct: 431 ETLGVVPT----AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAE 486
Query: 476 LGRVSDAEIYRKEKKSIQADALSKDAV 502
+GR+ +A++ KS + L+ D+V
Sbjct: 487 MGRLREAKVIFNRLKS---NGLAPDSV 510
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALI 435
V ++EEM G +Y + I LG A R A +I + ED C TYT LI
Sbjct: 248 VKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRM-EDDGCGPDVVTYTVLI 306
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
+AG D A++++ M P T+ +L G + + + E ++AD
Sbjct: 307 DALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSE---MEAD 363
Query: 496 ALSKDAV 502
+ D +
Sbjct: 364 GYAPDVI 370
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 186/428 (43%), Gaps = 34/428 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG+ D TYTT++ RIS +F MQ+ G +A+TY ++M L G++
Sbjct: 160 RGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISI 219
Query: 120 AVNIWEEMKLKECY------PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
A+ + +EM P ++SY+ + L + R EA D+++EM +G+ P +
Sbjct: 220 ALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVIS 279
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
YT L+ GK+EEA +F++M GVQP+ N+LI+ CK G+ +L M
Sbjct: 280 YTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMI 339
Query: 234 ENRLALRYPVFKEALQTFK-VADENDSL-LWQVHPQ--FSPEFISDNDAVE--FVTTDIE 287
+ + + ++ F V D N + L+ P P+ I + T+ +E
Sbjct: 340 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 399
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
+ + G+ L + K+ ++ +LL+G+ D+ + +++V
Sbjct: 400 EAMKLYNGM-LQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV------------- 445
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
Y + DL + Y + L K + E+ ++ L + LI L
Sbjct: 446 --YGIPGDLYI----YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 499
Query: 408 ARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
A + A ++F LP++ Q TY +I + G KA +++ M + G P T
Sbjct: 500 AGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKIT 559
Query: 466 FNVLLAGL 473
+ L+ G
Sbjct: 560 YATLIRGF 567
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+A FN + ++G + T+ ++D+ + ++ K + E+M ++GI + +TY S
Sbjct: 294 EEAKRLFNEMV-NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNS 352
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ GD++ A ++ M K C P ++ YT + +V+EA +Y M+Q G
Sbjct: 353 LIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 412
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
P+ TY L+ L + GK +A ++F M+ G+ D I + CK G
Sbjct: 413 KRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNG 466
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 173/438 (39%), Gaps = 72/438 (16%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
++T +L + K S + Y++ M+ GI+ D T +++ L N V + + +
Sbjct: 98 SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P IV+YT +K L + R+ +A ++ M + G PN TY LM+ L R G
Sbjct: 158 LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217
Query: 188 EEALEIFSKMQE------AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
AL++ +M +P + +I+I+ CK + MK +
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ + F + W+ + E ++ VT ++ L+ +L
Sbjct: 278 ISYTSLIHGFCCGGK-----WEEAKRLFNEMVNQGVQPNVVTFNV---------LIDVLC 323
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K+ ++ LL ++ + I + +++IE C + DLN R
Sbjct: 324 KEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC---------------LVGDLNSARE 368
Query: 362 AYLAL---------IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++++ I + +N + K +++ E M +Y G L + +RP
Sbjct: 369 LFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMK-------LYNGMLQV-----GKRP- 415
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
D K TY AL+ F G A K++ M GI L + + L G
Sbjct: 416 -----------DVK---TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNG 461
Query: 473 LEKLGRVSDA-EIYRKEK 489
L K G + +A E++ K K
Sbjct: 462 LCKNGCLFEAMELFNKLK 479
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 170/415 (40%), Gaps = 81/415 (19%)
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F LM ++T ++ L+ ++ +M+L P + + L
Sbjct: 84 FHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCN 143
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+RV E V +++RG P+ TYT L++ L + +A +F++MQ+ G P+
Sbjct: 144 VNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAIT 203
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
L++ C+ G +++ + +E L NDS L+ ++ F
Sbjct: 204 YGTLMKGLCRTGN---------------ISIALKLHQEML--------NDSSLYGIN--F 238
Query: 269 SPEFISDNDAVEFVTTDIEGPLSID-------QGLVLILLKKKNLV----------AIDS 311
P IS + ++ + D + D QG+ ++ +L+
Sbjct: 239 KPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKR 298
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
L + ++++ +Q + + +I+V C ++G ++ E +++ ++R GI+
Sbjct: 299 LFNEMVNQGVQPNVVTFNVLIDVLC----KEGKVI--EAKDLLEVMIQR-------GIVP 345
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---T 428
L T+ + E G L+ L SAR ++F +P + C
Sbjct: 346 NLLTYNSLIE----------------GFCLVGDLNSAR------ELFVSMP-SKGCEPDV 382
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
YT LI Y ++A+K+Y M + G P + T+ LL GL + G+V DA+
Sbjct: 383 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 437
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 9/236 (3%)
Query: 18 DSAQDLLKNLPIKWD-----SYTV--NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
+SA++L ++P K YTV N KT +E+A +N + + G D TY
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKT-SKVEEAMKLYNGMLQV-GKRPDVKTYG 421
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L + ++ K +F +M+ GI D Y ++ L G + A+ ++ ++K
Sbjct: 422 ALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSY 481
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
I + + L +++ A ++++++ Q L P+ TY +++ R G+ +A
Sbjct: 482 NIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 541
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+F KM++ G PDK LI ++ + ++ +L M + ++L + +
Sbjct: 542 NILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNILRH 597
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 177/438 (40%), Gaps = 51/438 (11%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA F+ ++R +G D TY ++D +A+ + + V M G D VTY +
Sbjct: 283 KACSLFHEMTR-QGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCM 341
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H + G + A ++ +MK + P IV +++ L + R KEA +++ M +G
Sbjct: 342 IHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH 401
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ +Y L+ G + + + +F+ M+ G+ D NILI K G +L
Sbjct: 402 KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAML 461
Query: 228 ILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
I M++ ++ + + F ++ D++ + Q I N AV
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAM--EKFNQMVARGIQPNTAVYH----- 514
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI-QLDSAVISTIIEVNCDHRRRDGAL 345
SI QG + LV L+S +++K I + D +++I C R A
Sbjct: 515 ----SIIQGFCM----HGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAH 566
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ + + + +LI + K +I++ M G +
Sbjct: 567 DIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDI---------- 616
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
TY+ L+ YF G + L +++ M RKG+ P+ T
Sbjct: 617 -----------------------VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Query: 466 FNVLLAGLEKLGRVSDAE 483
+ ++LAGL + GR A
Sbjct: 654 YGIMLAGLFRAGRTVAAR 671
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 191/458 (41%), Gaps = 59/458 (12%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKG--INIDAVTYTSVMHWLSNAGDVDGAVNIW 124
F+Y+ +L + +F++M ++G + + V Y +V+H G+ A +++
Sbjct: 229 FSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLF 288
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P +V+Y + L + +A V ++M G P+ TY ++
Sbjct: 289 HEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATL 348
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ +EA ++F KM+ G+ P+ CN + CK G +
Sbjct: 349 GRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRS---------------------- 386
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFIS-------------DNDAVEFVTTDIEGPLS 291
KEA + F DS+ + H P+ +S D + + ++
Sbjct: 387 KEAAEIF------DSMTAKGH---KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIA 437
Query: 292 IDQGLVLILLK---KKNLVAIDSLL--SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
D + IL+ K+ +V D++L + + + + D ST+I R A+
Sbjct: 438 ADCRVFNILIHAYAKRGMVD-DAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAME 496
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG--VYLGALLIHR 404
F V + Y ++I K E+V EM G V+ + +I+
Sbjct: 497 KFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNS-VINS 555
Query: 405 LGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L R + A IF L+ + ++ T+T+LI Y G DKA KI M G+
Sbjct: 556 LCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETD 615
Query: 463 LGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQADALS 498
+ T++ LL G K GR++D ++R+ ++K ++ + ++
Sbjct: 616 IVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVT 653
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI-WEE 126
TY+ ++D A+R +F + G+ I +T ++++ L A + AVN+
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG--LPPNCYTYTVLMEYLVRA 184
M C P + SY+ +K L N + A D+++ M + G PN Y ++ +
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
G+ +A +F +M GV+PD N++I+ CKA L+LR M N
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTN 329
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++++ + R+ +F+L+ + G D +T+TS++ G +D A I + M+
Sbjct: 549 FNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAME 608
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ IV+Y+ + F N R+ + +++EM ++G+ PN TY +++ L RAG+
Sbjct: 609 VVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTV 668
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCK 218
A + F +M E+G + I++ C+
Sbjct: 669 AARKKFHEMIESGTTVTVSIYGIILGGLCR 698
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+T+++D + ++ + + M+ G+ D VTY++++ G ++ + ++
Sbjct: 580 DVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLF 639
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM+ K P V+Y + LF R A + EMI+ G Y +++ L R
Sbjct: 640 REMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRN 699
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+EA+ +F K+ V+ N +I
Sbjct: 700 NCADEAIILFQKLGTMNVKFSITILNTMIN 729
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 35/196 (17%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+T+LD + + RI+ +F MQ KG+ + VTY ++ L AG A
Sbjct: 611 GVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAA 670
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLND------------------------------ 150
+ EM T+ Y + L N+
Sbjct: 671 RKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINA 730
Query: 151 -----RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
R +EA +++ + GL PN TY V++ L++ G E+A +FS M+++G+ P
Sbjct: 731 MYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPG 790
Query: 206 KAACNILIEKCCKAGE 221
N +I + GE
Sbjct: 791 SRLLNRIIRMLLEKGE 806
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN-TFPKVAEIVEEMT 387
S +++ C RR D L+ F ++ L + + L+ L N T V ++ M+
Sbjct: 161 SILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMS 220
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP-EDQKCT---ATYTALIGVYFSAGS 443
+ G V+ ++++ L A +F ++ E C+ Y +I +F G
Sbjct: 221 ELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGE 280
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
KA ++ M R+G+ P + T+N+++ L K + AE+ ++
Sbjct: 281 TGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 189/479 (39%), Gaps = 81/479 (16%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++D + R S + +F MQEKGI D TY S++ ++G A + +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++ P +V+Y A + + EA ++Y EM+ RG+ PN TY+ +++ + + +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A +F M G P+ N LI+ C A + +L M E L + +
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
F + + ++ L + S D +V
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPD------------------------------IVT 467
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT------- 361
D+LL G+ CD+ + AL F+ K +L+ +
Sbjct: 468 CDTLLDGL-------------------CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 362 ----AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y LI LI F + E+ EEM G + +I L R A ++
Sbjct: 509 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 568
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + T+T LI Y AG D L+++ M R+GI + T+ L+ G K
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 476 LGRVSDA-EIYRKEKKS-IQADALS--------------KDAVPMEEKI---CDLLYGG 515
+G ++ A +I+++ S + D ++ K AV M EK+ DL +GG
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFGG 687
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/475 (20%), Positives = 191/475 (40%), Gaps = 60/475 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ + RSR + ++ + +R + +++ M+ K I D ++T
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFT 118
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + + A++ + ++ +P +V++ + L + DRV EA +++ +M +
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN T+T LM L R G+ EA+ + +M E G+QP + +++ CK G+T +
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSA 238
Query: 226 ILILRYMKE-----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN---- 276
+ +LR M+E + + + + + +D + P+ + N
Sbjct: 239 LDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 277 ---------DAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
DA + + +E +S D L+ +K+ + L ++ + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
++ S++I+ C R D A F + + LI E++
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
EMT+ G L D T TY LI ++ G
Sbjct: 419 HEMTETG------------------------------LVAD---TTTYNTLIHGFYLVGD 445
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA----EIYRKEKKSIQA 494
+ AL + + M G+ P + T + LL GL G++ DA ++ +K KK + A
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 163/429 (37%), Gaps = 62/429 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D FTY +M+ F + R S + + + M E+ I+ D VTY ++++ G
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +++EM + P ++Y++ + +R+ A ++ M +G PN T+ L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ A + ++ +E+ +M E G+ D N LI G+ + +L+ M + L
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 238 A-------------LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
K+AL+ FKV ++ L HP
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP----------------FN 505
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+E + L+ L+ + + + L + + I D+ S++I+ C R D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F+ + + LI K E+ EM
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM------------------ 607
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
RR + A I TY LI + G+ + AL I++ M G++P
Sbjct: 608 ---GRRGIVANAI------------TYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652
Query: 465 TFNVLLAGL 473
T +L GL
Sbjct: 653 TIRNMLTGL 661
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ ++G + + T+ T++D + AKRI + M E G+ D TY +++H
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ---------- 164
GD++ A+++ +EM P IV+ + L N ++K+A +++K M +
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 165 -RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G+ P+ TY +L+ L+ GK+ EA E++ +M G+ PD + +I+ CK
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
D+ + L+ M+K+ + G D TY ++ + + ++E
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +GI D +TY+S++ L +D A +++ M K P +V++T + R
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
V + +++ EM +RG+ N TY L+ + G AL+IF +M +GV PD
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 155/396 (39%), Gaps = 61/396 (15%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E G +++ S H + D A++++ +M P++V + M ++ +R
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLED---AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD 96
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+Y++M ++ + + Y++T+L++ K AL F K+ + G+ PD N L+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLL 156
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
C E+R++ EAL F H F E
Sbjct: 157 HGLC---------------VEDRVS-------EALNLF-------------HQMF--ETT 179
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ V F T L+ L ++ +V +LL +M+ +Q TI++
Sbjct: 180 CRPNVVTFTT------------LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
Query: 334 VNCDHRRRDGALLAFEYSVKMD----LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C + + A + KM+ + Y A+I L K + EM +
Sbjct: 228 GMC---KIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKA 447
G ++ +I S+ R A ++ + E + TY ALI + G +A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++Y M +GI P+ T++ ++ G K R+ AE
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M+D + R+ +F+ M K + + VT+T++++ AG VD
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y + + A D+++EMI G+ P+ T ++
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + + A+ + K+Q
Sbjct: 660 GLWSKEELKRAVAMLEKLQ 678
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 20 AQDLLKNLP---IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A++L + +P I D+ T + + L +++A F+ + S+ F+ + T+TT++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG-SKSFSPNVVTFTTLI 588
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ + +A R+ +F M +GI +A+TY +++ G+++GA++I++EM Y
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEM 162
P ++ + L+ + +K A + +++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 187/468 (39%), Gaps = 59/468 (12%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++D + R S + +F MQEKGI D TY S++ ++G A + +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++ P +V+Y A + + EA ++Y EM+ RG+ PN TY+ +++ + + +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A +F M G P+ N LI+ C A + +L M E L + +
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
F + + ++ L + S D +V
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPD------------------------------IVT 467
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
D+LL G+ D D+ + +++ + E V+ Y LI
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ--------TYNILIS 519
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
LI F + E+ EEM G + +I L R A ++F +
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 579
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIY 485
T+T LI Y AG D L+++ M R+GI + T+ L+ G K+G ++ A +I+
Sbjct: 580 NVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIF 639
Query: 486 RKEKKS-IQADALS--------------KDAVPMEEKI---CDLLYGG 515
++ S + D ++ K AV M EK+ DL +GG
Sbjct: 640 QEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLSFGG 687
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/475 (20%), Positives = 191/475 (40%), Gaps = 60/475 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ + RSR + ++ + +R + +++ M+ K I D ++T
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFT 118
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + + A++ + ++ +P +V++ + L + DRV EA +++ +M +
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN T+T LM L R G+ EA+ + +M E G+QP + +++ CK G+T +
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 226 ILILRYMKE-----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN---- 276
+ +LR M+E + + + + + +D + P+ + N
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 277 ---------DAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
DA + + +E +S D L+ +K+ + L ++ + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
++ S++I+ C R D A F + + LI E++
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
EMT+ G L D T TY LI ++ G
Sbjct: 419 HEMTETG------------------------------LVAD---TTTYNTLIHGFYLVGD 445
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA----EIYRKEKKSIQA 494
+ AL + + M G+ P + T + LL GL G++ DA ++ +K KK + A
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 163/429 (37%), Gaps = 62/429 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D FTY +M+ F + R S + + + M E+ I+ D VTY ++++ G
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +++EM + P ++Y++ + +R+ A ++ M +G PN T+ L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ A + ++ +E+ +M E G+ D N LI G+ + +L+ M + L
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 238 A-------------LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
K+AL+ FKV ++ L HP
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP----------------FN 505
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+E + L+ L+ + + + L + + I D+ S++I+ C R D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F+ + + LI K E+ EM
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM------------------ 607
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
RR + A I TY LI + G+ + AL I++ M G++P
Sbjct: 608 ---GRRGIVANAI------------TYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652
Query: 465 TFNVLLAGL 473
T +L GL
Sbjct: 653 TIRNMLTGL 661
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ ++G + + T+ T++D + AKRI + M E G+ D TY +++H
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ---------- 164
GD++ A+++ +EM P IV+ + L N ++K+A +++K M +
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 165 -RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G+ P+ TY +L+ L+ GK+ EA E++ +M G+ PD + +I+ CK
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
D+ + L+ M+K+ + G D TY ++ + + ++E
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +GI D +TY+S++ L +D A +++ M K P +V++T + R
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
V + +++ EM +RG+ N TY L+ + G AL+IF +M +GV PD
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 155/396 (39%), Gaps = 61/396 (15%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E G +++ S H + D A++++ +M P++V + M ++ +R
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLED---AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD 96
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+Y++M ++ + + Y++T+L++ K AL F K+ + G+ PD N L+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLL 156
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
C E+R++ EAL F H F E
Sbjct: 157 HGLC---------------VEDRVS-------EALNLF-------------HQMF--ETT 179
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ V F T L+ L ++ +V +LL +M+ +Q TI++
Sbjct: 180 CRPNVVTFTT------------LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
Query: 334 VNCDHRRRDGALLAFEYSVKMD----LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C ++ + A KM+ + Y A+I L K + EM +
Sbjct: 228 GMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKA 447
G ++ +I S+ R A ++ + E + TY ALI + G +A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++Y M +GI P+ T++ ++ G K R+ AE
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M+D + R+ +F+ M K + + VT+T++++ AG VD
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y + + A D+++EMI G+ P+ T ++
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + + A+ + K+Q
Sbjct: 660 GLWSKEELKRAVAMLEKLQ 678
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 20 AQDLLKNLP---IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A++L + +P I D+ T + + L +++A F+ + S+ F+ + T+TT++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG-SKSFSPNVVTFTTLI 588
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ + +A R+ +F M +GI +A+TY +++ G+++GA++I++EM Y
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEM 162
P ++ + L+ + +K A + +++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 203/480 (42%), Gaps = 74/480 (15%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+GF D TY ++L F ++ + E M ++G D +TY +++H G D
Sbjct: 384 SKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHD 443
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I+ +MK P V+YT + L +V+EA +V EM+ G+ P +TY+ L+
Sbjct: 444 QAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALI 503
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM------ 232
+AGK EEA E F+ M+ +G++PD+ A +++++ + E + + + M
Sbjct: 504 CAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFT 563
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVH--PQFSPEFISD--------NDAVEFV 282
+N L Y V AL + D D ++ + +P+ IS + A + +
Sbjct: 564 PDNGL---YEVMMHALVRENMWDVVDRIIRDMEELSGMNPQVISSVLVKGGCYDHAAKML 620
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE----VNCDH 338
I +D + L ++ + A S +++ S + I I E + C
Sbjct: 621 KVAISNGYELDHEIFLSIMSSYSSSARYSEACELLEFSREHAPNDIQMITEALIIILCKA 680
Query: 339 RRRDGALLAFEYSVKMDLNLER--TAYLALIGILIKLNTFPKVAEIVEEMTKAG--HSLG 394
++ D AL EY K +L R T Y +LI I+ F ++I +M G S
Sbjct: 681 KKLDAALE--EYRSKGELGQFRSCTMYESLIQECIQNELFDVASQIFSDMRFNGVESSEC 738
Query: 395 VYLGALLIHRLGSARRPVP---------AAKIFSLLPED--------------------- 424
+Y G + ++ R +P A K +L D
Sbjct: 739 LYQGMVSVY----CRMDLPETAHHLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAE 794
Query: 425 -------QKCT----ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
Q+C+ + ALI Y +G ++A I+ TM R G P++ + N LL L
Sbjct: 795 SLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQAL 854
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +TY M+ ++G R + +F+ ++ KG DAVTY S+++ S G+ + +I
Sbjct: 355 DLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDIC 414
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEM + ++Y + + R +A +Y++M G P+ TYTVL++ L +A
Sbjct: 415 EEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKA 474
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
K EEA + S+M +AGV+P + LI KAG+ M+ + + +
Sbjct: 475 SKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAY 534
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
L F +E + H F DN E +
Sbjct: 535 SVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVM 572
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/339 (18%), Positives = 139/339 (41%), Gaps = 16/339 (4%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG--AVNIWEE 126
Y M+ ++ R S +K + +LM+E+G D V++ ++++ +G ++ A+ + E
Sbjct: 252 YNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNE 311
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
++ P I++Y + ++EA V+ +M P+ +TY ++ R +
Sbjct: 312 VRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCAR 371
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+A E+F +++ G PD N L+ + G T + I M + +
Sbjct: 372 ARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNT 431
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ + +D + Q++ + DAV + L+ L K +
Sbjct: 432 IIHMYGKQGRHDQAM-QIYRDMKSSG-RNPDAVTYTV------------LIDSLGKASKV 477
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+++S ++D ++ S +I +R+ A F + + +R AY +
Sbjct: 478 EEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVM 537
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+ ++ N K + EM + G + L +++H L
Sbjct: 538 LDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHAL 576
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/347 (18%), Positives = 138/347 (39%), Gaps = 26/347 (7%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE--ALE 192
T+ Y A M + N R + ++ M +RG P+ ++ L+ +++G E AL+
Sbjct: 248 TVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQ 307
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF- 251
+ ++++ +G++PD N LI C + + + M+ +R + + +
Sbjct: 308 LLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYG 367
Query: 252 --KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
A + + L ++ + F P+ ++ N L+ ++ N
Sbjct: 368 RCARARKAEELFKELESKGFFPDAVTYN------------------SLLYAFSREGNTEK 409
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ + ++ + D +TII + R D A+ + N + Y LI
Sbjct: 410 VRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLID 469
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
L K + + A ++ EM AG ++ + LI A + A + F+ + +
Sbjct: 470 SLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKP 529
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
Y+ ++ + KA+ +Y M R+G P G + V++ L
Sbjct: 530 DRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHAL 576
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNA 114
R RG D ++ T+++ ++ + +L+ E GI D +TY +++ S
Sbjct: 276 RERGCVPDLVSFNTLINARMKSGAMEP-NLALQLLNEVRRSGIRPDIITYNTLISACSRE 334
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
+++ AV ++ +M+ C P + +Y A + + R ++A +++KE+ +G P+ TY
Sbjct: 335 SNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTY 394
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK- 233
L+ R G E+ +I +M + G D+ N +I K G + I R MK
Sbjct: 395 NSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKS 454
Query: 234 --ENRLALRYPVFKEAL 248
N A+ Y V ++L
Sbjct: 455 SGRNPDAVTYTVLIDSL 471
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/455 (18%), Positives = 167/455 (36%), Gaps = 85/455 (18%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
++D Y +++ +G+ K + + ++++ +D + +++H + +G + A
Sbjct: 770 LDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERAR 829
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
I+ M PT+ S ++ L ++ R+ E V +E+ GL + + + +E
Sbjct: 830 AIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAF 889
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+AG E +I++ M+ AG P I++ CK R + +L M+E
Sbjct: 890 AQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEE------- 942
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
F P+ L I ++ + L
Sbjct: 943 ------------------------AGFQPD------------------LQICNSILKLYL 960
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
++ ++ + I D S++ D +T+I + C RR + + L +
Sbjct: 961 GIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLD 1020
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +LI K + + E+ EE+ G+ L
Sbjct: 1021 TYRSLITAFNKQRMYEQAEELFEELRSNGYKLD--------------------------- 1053
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
A Y ++ Y ++G KA + M GI P++ T ++L+ K G+ +
Sbjct: 1054 ------RAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEE 1107
Query: 482 AEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
AE K+++ + D +P I L GD
Sbjct: 1108 AE---NVLKNLRTTGVVLDTLPYSSVIDAYLKKGD 1139
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 8/227 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS G TY +++ F + + + +FE ++ G +D Y +M +GD
Sbjct: 1011 RSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDH 1070
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A N+ MK PTI + M + + +EA +V K + G+ + Y+ +
Sbjct: 1071 RKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSV 1130
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ ++ G ++ +E ++M+EAG++PD I + T I++L +++
Sbjct: 1131 IDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAGF 1190
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
L + KE ++ + E D L ++ P + DN A V
Sbjct: 1191 DLPIRLLKEKSES--LVSEVDQCLERLEP------VEDNAAFNLVNA 1229
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/392 (19%), Positives = 152/392 (38%), Gaps = 17/392 (4%)
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY-PTIVSYT 140
+ S ++V +++E+ + + + V+ W+ + A+ ++E + L+ Y P
Sbjct: 161 LKSEEFVAGVLEERRVQMTPTDFCFVVKWVGQQ-NWQRALELYECLNLRHWYAPNARMVA 219
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ +L ++ A +++ + + Y +M R G++ + E+ M+E
Sbjct: 220 TILGVLGKANQEALAVEIFAR-AESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRER 278
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
G PD + N LI K+G + + + R +R + T A +S
Sbjct: 279 GCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDII--TYNTLISACSRESN 336
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
L + FS + + + L ++ + + + L + K
Sbjct: 337 LEEAVAVFS----------DMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKG 386
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+ ++++ + E VK + Y +I + K +
Sbjct: 387 FFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAM 446
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKCT-ATYTALIGVY 438
+I +M +G + +LI LG A + AA + S +L K T TY+ALI Y
Sbjct: 447 QIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAY 506
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
AG ++A + + M R GI P ++V+L
Sbjct: 507 AKAGKREEAEETFNCMRRSGIKPDRLAYSVML 538
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 80/178 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G+ Y ML + + KR+ ++ + M+E G D S++ D
Sbjct: 906 KAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDF 965
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
I+++++ P +Y + + + R +E + +M GL P TY L
Sbjct: 966 KSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSL 1025
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ + YE+A E+F +++ G + D+A +++++ +G+ R +L MKE+
Sbjct: 1026 ITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKES 1083
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 13 KYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHP---PMEKAWLFFNWVSRSRGFNHDR 66
K W A+ L+ +L K D N ++ + E+A FN + R G +
Sbjct: 786 KLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRD-GPSPTV 844
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ +L +R++ + V + +Q+ G+ I + + + AG++ I+
Sbjct: 845 DSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNG 904
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK +PT+ Y +++L RV++ + EM + G P+ +++ +
Sbjct: 905 MKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIED 964
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
++ I+ K+Q+A ++PD+ N LI C+
Sbjct: 965 FKSMGIIYQKIQDASLKPDEETYNTLIIMYCR 996
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/179 (16%), Positives = 83/179 (46%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D ++L ++ + SM +++ +Q+ + D TY +++ +
Sbjct: 944 GFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEG 1003
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ +M+ P + +Y + + ++A ++++E+ G + Y ++M+
Sbjct: 1004 FSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKT 1063
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+G + +A + + M+E+G++P + ++L+ K+G+ +L+ ++ + L
Sbjct: 1064 YRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVL 1122
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 193/486 (39%), Gaps = 43/486 (8%)
Query: 23 LLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGF--NHDRFTYTTMLDIFG 77
LL LP D+ + N VL ++ A +S + +YTT++
Sbjct: 46 LLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALC 105
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+R + + MQ+ G+ D VTY +++ L +A DVD AV + EM P +V
Sbjct: 106 ADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVV 165
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
Y+ + R + V++EM RG+ P+ YT L++ L R GK ++A + M
Sbjct: 166 VYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMM 225
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVA 254
E G++P+ N+LI CK G R + + + M E + + Y L +
Sbjct: 226 TERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEM 285
Query: 255 DENDSLL---WQVHPQFSPEFISDNDAVEFVTTDIEGPLSID---QGLVLILLKKK---- 304
DE +LL Q + P+ ++ N I G I Q L + + +
Sbjct: 286 DEAMALLEEMMQGETRVRPDLMTFNSV-------IHGLCKIGWMRQALQVRAMMAENGCR 338
Query: 305 -NLVAIDSLLSG------------IMDK----SIQLDSAVISTIIEVNCDHRRRDGALLA 347
NLVA + L+ G +MD+ +Q DS S +I C R+ + A
Sbjct: 339 CNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESY 398
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+ E Y+ L+ + + ++ EM + ++ S
Sbjct: 399 LSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKS 458
Query: 408 ARRPVPAAKIFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ + + ++ E A TY+ I ++ +G A ++ K M G P + F
Sbjct: 459 GEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVF 518
Query: 467 NVLLAG 472
+ L+ G
Sbjct: 519 DSLIQG 524
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 5/244 (2%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+ +L+ H ++KA + ++ S G D FTY+ +++ F + +++ + M+ +
Sbjct: 348 IGGLLRVHK-VKKAMELMDEMASS-GLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQ 405
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G+ + V Y ++ + + G + A +++ EM + C +Y+ + F + K A
Sbjct: 406 GMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIA 464
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ K+MI GL P+ TY++ + ++G A + +M +G PD A + LI+
Sbjct: 465 EEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQG 524
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
G+T I+ + R M +AL + + + + E LL Q P F E IS
Sbjct: 525 YGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLL-QSLPGFDTE-ISK 582
Query: 276 NDAV 279
D +
Sbjct: 583 GDVI 586
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/468 (19%), Positives = 183/468 (39%), Gaps = 59/468 (12%)
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGA 120
D +Y T+L + + ++ +M + +A++YT++M L A
Sbjct: 54 RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQA 113
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + M+ P +V+Y ++ L V A ++ EM + G+ PN Y+ L+
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHG 173
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--- 237
+ G++E ++F +M G++PD LI+ C+ G+ + ++ M E L
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233
Query: 238 ALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y V ++ + V + D P+ ++ N + T + L +D+ +
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLI----TGLSSVLEMDEAM 289
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
L ++ ++ G + ++ D +++I C AL +
Sbjct: 290 AL----------LEEMMQG--ETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGC 337
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
A+ LIG L++++ K E+++EM +G + ++LI+ R+ A
Sbjct: 338 RCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAES 397
Query: 417 IFS------LLPE---------------------------DQKC---TATYTALIGVYFS 440
S + PE D+ C A Y+ +I F
Sbjct: 398 YLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFK 457
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+G A + K M +G+ P T+++ + K G ++ AE K+
Sbjct: 458 SGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQ 505
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 158/415 (38%), Gaps = 50/415 (12%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
DAV+Y +V+ L G +D A+ + M + P + S
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHE---PRLASR-------------------- 91
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
PN +YT LM L + +A+ + MQ+ GV+PD LI C A
Sbjct: 92 ---------PNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDA 142
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
+ T + +L M E+ + V+ L + +S+ +V + S I + D V
Sbjct: 143 ADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESV-GKVFEEMSGRGI-EPDVV 200
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ L+ L + + ++ + ++ ++ + + +I C
Sbjct: 201 MYTA------------LIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEG 248
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
AL + + + + Y LI L + + ++EEM + + L
Sbjct: 249 SVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMT 308
Query: 400 L--LIHRLGSARRPVPAAKIFSLLPEDQ-KCT-ATYTALIGVYFSAGSADKALKIYKTMC 455
+IH L A ++ +++ E+ +C + LIG KA+++ M
Sbjct: 309 FNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMA 368
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICD 510
G+ P T+++L+ G K+ +V AE Y E + + +P+ + +CD
Sbjct: 369 SSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCD 423
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 4/190 (2%)
Query: 75 IFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+ G R+ +K ELM E G+ D+ TY+ +++ V+ A + EM+ +
Sbjct: 347 LIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQG 406
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P V Y +K + + +A D++ EM R + Y+ ++ ++G+ + A
Sbjct: 407 MEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAE 465
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
E M + G+ PD +I I K+G+ +L+ M + VF +Q +
Sbjct: 466 EFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGY 525
Query: 252 KVADENDSLL 261
+ + +L
Sbjct: 526 GAKGDTEKIL 535
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 195/483 (40%), Gaps = 91/483 (18%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D FT M+ + R+ + F +E+G+ +DA Y+ ++ + + +
Sbjct: 254 RGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNL 313
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + EEMK + P+ ++T+ + + EA + +EMI G P N T LM+
Sbjct: 314 GLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMK 373
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN---- 235
G + AL +F+K+ E G+ P+K ++LIE CC +G + MK N
Sbjct: 374 GYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 433
Query: 236 ---------RLALRYPVFKEALQTFKVA------------------------DENDSLLW 262
R L+ P+++EA + F A DE SLL
Sbjct: 434 SVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLD 493
Query: 263 Q-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V+ P +S ND ++L +K N+ S+ S ++ + +
Sbjct: 494 NMVNQGMVPNVVSYND------------------MILGHCRKGNMDMASSVFSDMLARDL 535
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
+ + S +I+ N + AL F+ + +++ + +I L K
Sbjct: 536 KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK--------- 586
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSA 441
V +M++A L +L I P+ TY +++ +
Sbjct: 587 -VGQMSEARDKLKNFLEEGFI----------PSC-------------MTYNSIVDGFIKE 622
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALSK 499
G+ D AL +Y+ MC G+ P++ T+ L+ G K R+ A R E +K ++ D +
Sbjct: 623 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 682
Query: 500 DAV 502
A+
Sbjct: 683 SAL 685
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 184/439 (41%), Gaps = 72/439 (16%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +M WL G +D A ++ + M + P +VSY + + A+ V+ +M
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ R L PN TY++L++ + G E+AL++F +M + P N +I CK G+
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ- 589
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE-F 281
M E R + L+ F + F P ++ N V+ F
Sbjct: 590 ---------MSEAR---------DKLKNF------------LEEGFIPSCMTYNSIVDGF 619
Query: 282 VTT-DIEGPLSIDQGLVLILLKKKNLVAIDSLLSG----------------IMDKSIQLD 324
+ +I+ L++ + + + N+V SL++G + +K ++LD
Sbjct: 620 IKEGNIDSALAVYREMCEFGVSP-NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 678
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S +I+ C R + A F +++ L+ R Y ++I LN +
Sbjct: 679 VTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYK 738
Query: 385 EMT--KAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIG 436
+M + LG Y LI L R V A+ ++ ++P+ T+ L+
Sbjct: 739 KMINDRIPCDLGTY--TTLIDGLLKEGRLVFASDLYMEMLSKGIVPD----IITFHVLVN 792
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADA 496
+ G + A KI + M RK + PS+ +N L+AG + G + KE ++ +
Sbjct: 793 GLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL-------KEAFTLHDEM 845
Query: 497 LSKDAVPMEEKICDLLYGG 515
L + VP ++ D+L G
Sbjct: 846 LDRGLVP-DDVTYDILING 863
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/408 (17%), Positives = 169/408 (41%), Gaps = 16/408 (3%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+ + ++ + + M +G+ + V+Y ++ G++D A +++ +
Sbjct: 470 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 529
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M ++ P +V+Y+ + F ++A D++ +M+ + P +T+ ++ L + G+
Sbjct: 530 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 589
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EA + E G P N +++ K G + + + R M E ++ +
Sbjct: 590 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 649
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ F ++ D L E +E ++ L+ K++++
Sbjct: 650 LINGFCKSNRIDLALKTRD--------------EMREKGLELDVTAYSALIDGFCKRRDM 695
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+ L +++ + + V +++I D + AL+ ++ + + + Y L
Sbjct: 696 ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTL 755
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I L+K +++ EM G + +L++ L + + A KI +
Sbjct: 756 IDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNM 815
Query: 427 CTAT--YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ Y LI YF G+ +A ++ M +G+ P T+++L+ G
Sbjct: 816 TPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 87/178 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + TYT++++ F ++ RI + M+EKG+ +D Y++++ D++ A
Sbjct: 639 GVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESA 698
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ E+ P + Y + + + ++ A YK+MI +P + TYT L++
Sbjct: 699 QDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDG 758
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L++ G+ A +++ +M G+ PD ++L+ C G+ IL M +
Sbjct: 759 LLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 816
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 184/484 (38%), Gaps = 88/484 (18%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIF-------GEAKRI-----------SSMKYV 88
+ A +F RGF Y +L I G A+++ S + +V
Sbjct: 115 QSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDPSPVVFV 174
Query: 89 FELM---QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
L+ + +D + +++ A ++ A++ + M ++ P + +
Sbjct: 175 DHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTA 234
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + + E D+Y +M+ RG+ + +T V++ ++ G+ EEA E F + +E GV+ D
Sbjct: 235 LVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLD 294
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
A +I+I+ CK + + +L MKE R V EA T +
Sbjct: 295 AGAYSIIIQAVCKKPNSNLGLELLEEMKE-----RGWVPSEATFTSVIV----------- 338
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
++ + VE + E I+ G K NLV SL+ G
Sbjct: 339 -----ACVAQGNMVEALRLKEE---MINCG------KPMNLVVATSLMKGY--------- 375
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
C D AL F + L + Y LI K +E+ +
Sbjct: 376 ----------CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQ 425
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPV--PAAKIFSLLPEDQKCTA----TYTALIGVYF 439
M G V+ L+ G + P+ A+K+F E C TY ++
Sbjct: 426 MKLNGIPPSVFNVNSLLR--GYLKAPLWEEASKLFD---EAVDCGVANIFTYNIMMSWLC 480
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSK 499
G D+A + M +G+ P++ ++N ++ G + G + A S+ +D L++
Sbjct: 481 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA-------SSVFSDMLAR 533
Query: 500 DAVP 503
D P
Sbjct: 534 DLKP 537
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A +++ + R D TYTT++D + R+ ++ M KGI D +T+
Sbjct: 730 MEAALVWYKKMINDR-IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFH 788
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L N G ++ A I EEM K P+++ Y + F +KEA ++ EM+ R
Sbjct: 789 VLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 848
Query: 166 GLPPNCYTYTVLM 178
GL P+ TY +L+
Sbjct: 849 GLVPDDVTYDILI 861
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 46 MEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
ME A LFF + G + +R Y +M+ F + + + ++ M I D TY
Sbjct: 695 MESAQDLFFELLEV--GLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTY 752
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
T+++ L G + A +++ EM K P I+++ + L +++ A + +EM +
Sbjct: 753 TTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDR 812
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+ + P+ Y L+ R G +EA + +M + G+ PD +ILI
Sbjct: 813 KNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 861
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 181/432 (41%), Gaps = 62/432 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNA 114
+S G + + +L+ KR MK L+++ KGI +D Y+S+M
Sbjct: 473 KSWGLEENNIIFDILLN---NLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKE 529
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G+ A+++ +EM K+ +V+Y A K L + E V+ MI+ GL P+C TY
Sbjct: 530 GNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTY 588
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+M GK E AL++ ++M+ GV P+ NILI CK G +I +L M
Sbjct: 589 NSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEM-- 646
Query: 235 NRLALRY---PVF-KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
LA+ Y P+ K L+ + + + D++L Q+H + ++ N V + L
Sbjct: 647 --LAVGYVPTPIIHKFLLKAYSRSRKADAIL-QIHKKLVDMGLNLNQMVYNTLITVLCRL 703
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+ KK N+V L+ ++ K I D + +I C + A +
Sbjct: 704 G--------MTKKANVV-----LTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQ 750
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ ++ T Y AL+ L ++V EM + G
Sbjct: 751 MLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERG-------------------- 790
Query: 411 PVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
L+P TY L+ + G+ ++K+Y M KG P+ GT+NVL+
Sbjct: 791 ---------LVPN----ATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLI 837
Query: 471 AGLEKLGRVSDA 482
K G++ A
Sbjct: 838 QDYAKAGKMRQA 849
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/516 (21%), Positives = 212/516 (41%), Gaps = 108/516 (20%)
Query: 33 SYT--VNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
SYT ++ +LK+ ME FN S+ RG + D TTM+D +A + + +
Sbjct: 308 SYTTIISALLKSGRVMEA----FNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEM 363
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ + + + + VTYT+++ GDV+ A + ++M+ + P +V++++ +
Sbjct: 364 FQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAK 423
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ +A +V ++M+Q + PN + Y +L++ R G++E A + +M+ G++ +
Sbjct: 424 KGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNII 483
Query: 209 CNILIEKCCKAG---ETRTII-----------------LILRYMKENRLALRYPVFKEAL 248
+IL+ ++G E +++I L+ Y KE + V +E
Sbjct: 484 FDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMT 543
Query: 249 Q---TFKVADENDSL-----LWQVHPQ----------FSPEFISDNDAVE--FVTTDIEG 288
+ F V N L + P+ +P+ ++ N + F+ E
Sbjct: 544 EKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTEN 603
Query: 289 PLSI-----DQGLVLILLKKKNLVAIDSLLSGI-----MDKSIQLDSAVIST-------- 330
L + G++ N+V + L+ G+ ++K I + +++
Sbjct: 604 ALDLLNEMKSYGVM------PNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPII 657
Query: 331 ---IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++ R+ D L + V M LNL + Y LI +L +L K ++ EM
Sbjct: 658 HKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMV 717
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
G S + TY ALI Y + +KA
Sbjct: 718 IKGISADI---------------------------------VTYNALIRGYCTGSHVEKA 744
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y M GI P++ T+N LL GL G + DA+
Sbjct: 745 FNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDAD 780
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 193/479 (40%), Gaps = 54/479 (11%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
RD S V TWD +DL + + W T+ H ++ + + + S G
Sbjct: 211 RDDESGVLNDCGVETWDGLRDLQPTV-VTWT--TLIAAYCKHRGIDDFFSLYEQMIMS-G 266
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D T +++L +++ + M G++ + V+YT+++ L +G V A
Sbjct: 267 VMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAF 326
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
N +M ++ +V T M LF + KEA ++++ +++ L PNC TYT L++
Sbjct: 327 NHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGH 386
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ G E A + KM++ V P+ + +I K G + +LR M + +
Sbjct: 387 CKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNV 446
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
V+ L + ++++ F E S + DI L+ L
Sbjct: 447 FVYAILLDGYFRTGQHEA-----AAGFYKEMKSWGLEENNIIFDI---------LLNNLK 492
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
+ + SL+ I+ K I LD S++++ AL + + D+ +
Sbjct: 493 RSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVV 552
Query: 362 AYLALIGILIKLNTF-PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
AY AL L++L + PK + M + G L
Sbjct: 553 AYNALTKGLLRLGKYEPK--SVFSRMIELG-----------------------------L 581
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
P+ TY +++ YF G + AL + M G+ P++ T+N+L+ GL K G +
Sbjct: 582 TPD----CVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAI 636
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 34/243 (13%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIK---WDSYTVNQVLKTHPPME----KAWLFFNWVSRSR 60
V+ K D LL + K +DS T N ++K + + W+ N V
Sbjct: 82 VWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGG-- 139
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV--- 117
G D T++D + E +S + E + G+ D VTY ++++ GD+
Sbjct: 140 GVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKA 199
Query: 118 --------------------DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
D V W+ L++ PT+V++T + + + +
Sbjct: 200 ESVVNEILGFRRDDESGVLNDCGVETWD--GLRDLQPTVVTWTTLIAAYCKHRGIDDFFS 257
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+Y++MI G+ P+ T + ++ L R GK EA + +M G+ P+ + +I
Sbjct: 258 LYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALL 317
Query: 218 KAG 220
K+G
Sbjct: 318 KSG 320
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 29 IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
I D T N +++ T +EKA+ ++ + S G + + TY +L+ +
Sbjct: 721 ISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVS-GISPNITTYNALLEGLSTNGLMRDA 779
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ M+E+G+ +A TY ++ G+ ++ ++ EM K PT +Y ++
Sbjct: 780 DKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQD 839
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL------------MEYLVRAGKYEEALEI 193
++++A ++ EM+ RG PN TY VL M+ L++ EA ++
Sbjct: 840 YAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKL 899
Query: 194 FSKMQEAGVQPDKA 207
+M E G P ++
Sbjct: 900 LREMCEKGHVPSES 913
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/194 (17%), Positives = 76/194 (39%), Gaps = 21/194 (10%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D T ++ + + + +++ + G+ +DA+ +++ G V
Sbjct: 104 KGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSR 163
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ--------------- 164
A+++ E+ P IV+Y + + +A V E++
Sbjct: 164 ALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGV 223
Query: 165 ------RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
R L P T+T L+ + ++ ++ +M +GV PD C+ ++ C+
Sbjct: 224 ETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCR 283
Query: 219 AGETRTIILILRYM 232
G+ ++LR M
Sbjct: 284 HGKLTEAAMLLREM 297
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 175/427 (40%), Gaps = 25/427 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y+T++ + RI + + + M G+ D Y +++ LS AG ++ A
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
E++ + P V++ A++ ++ EA + EM+ GL PN YTVL+
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AG EAL IF + GV PD C+ I K G + + + +KE L
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F E + +++H + + I+ N + I LV L
Sbjct: 559 VFTYSSLISGFCKQGEVEK-AFELHDEMCLKGIAPN-------------IFIYNALVDGL 604
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K ++ L G+ +K ++ DS ST+I+ C A F +
Sbjct: 605 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 664
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-- 418
Y AL+ K K + EM + G + + L+ S + A+++F
Sbjct: 665 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ-EASQLFQE 723
Query: 419 ----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
++P+ TYT +I + AG ++A ++K M + + T+ L+ G
Sbjct: 724 MIAKQIMPDH----VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYN 779
Query: 475 KLGRVSD 481
KLG+ S+
Sbjct: 780 KLGQSSE 786
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 173/448 (38%), Gaps = 25/448 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +TYT + AKR++ K FE MQ+ G+ D ++++ GD+D
Sbjct: 203 KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 262
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ I + M +++Y + L ++++A ++ K MI G PN T+ +L+E
Sbjct: 263 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 322
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R ALE+ +M++ + P + +I C + +L M + L
Sbjct: 323 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 382
Query: 240 RYPVFKEALQTFKVA---DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
V+ + + +E LL D + V DI +
Sbjct: 383 NVVVYSTLIMGYASEGRIEEARRLL-------------DGMSCSGVAPDI----FCYNAI 425
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ L K + + L I + ++ D+ I + A F+ + L
Sbjct: 426 ISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 485
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y LI K + I + G V + IH L R A K
Sbjct: 486 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 545
Query: 417 IFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+FS L E TY++LI + G +KA +++ MC KGI P++ +N L+ GL
Sbjct: 546 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 605
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAV 502
K G + A RK + L D+V
Sbjct: 606 KSGDIQRA---RKLFDGMPEKGLEPDSV 630
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 195/461 (42%), Gaps = 27/461 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME+A + + + RG D T+ + + + +++ F+ M + G+ + YT
Sbjct: 435 MEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 493
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ AG++ A++I+ + P + + +A++ L N RV+EA V+ E+ ++
Sbjct: 494 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ +TY+ L+ + G+ E+A E+ +M G+ P+ N L++ CK+G+ +
Sbjct: 554 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 613
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEF 281
+ M E L ++ Y + + E SL ++ + P N V
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673
Query: 282 VTTDIEGPLSIDQGLVLILLKK--KNLVAIDSLLSG----------------IMDKSIQL 323
EG + L +L+K ++ ++L+ G ++ K I
Sbjct: 674 CCK--EGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 731
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D +T+I+ +C + + A L F+ + +L ++ Y +L+ KL +V +
Sbjct: 732 DHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALF 791
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSA 441
E+M G L+I+ V A K+ + T + LI
Sbjct: 792 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 851
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+A K+ M G+ PSL + L+ + G++ +A
Sbjct: 852 EDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 892
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 177/494 (35%), Gaps = 92/494 (18%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M +A L F + ++ G D + ++D F I + + ++M GI I+ +TY
Sbjct: 225 MNEAKLTFEEMQKT-GLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYN 283
Query: 106 SVMHWLSNAGDVDGAVNIW-----------------------------------EEMKLK 130
++H L G ++ A I +EM+ +
Sbjct: 284 VLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 343
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P+ VSY A + L + A + ++M GL PN Y+ L+ G+ EEA
Sbjct: 344 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEA 403
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIIL-----------------ILR 230
+ M +GV PD N +I KAG E T +L IL
Sbjct: 404 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 463
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
Y K ++ F E L D L +P + T I G
Sbjct: 464 YSKTGKMTEAAKYFDEML---------DHGLMPNNPLY--------------TVLINGH- 499
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
K NL+ S+ + + D S I + R AL F
Sbjct: 500 ----------FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSE 549
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ L + Y +LI K K E+ +EM G + +++ L+ L +
Sbjct: 550 LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 609
Query: 411 PVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A K+F +PE + + TY+ +I Y + + +A ++ M KG+ P +N
Sbjct: 610 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 669
Query: 469 LLAGLEKLGRVSDA 482
L+ G K G + A
Sbjct: 670 LVHGCCKEGDMEKA 683
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 59/335 (17%)
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ M ++GL PN YTYT++ L RA + EA F +MQ+ G++PD AC+ LI+ +
Sbjct: 198 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 257
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G+ ++ I M +S +
Sbjct: 258 GDIDEVLRIKDVM----------------------------------------VSCGIPI 277
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+T ++ L+ L K + +L G++ + +S +IE C
Sbjct: 278 NLITYNV---------LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 328
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
AL + K +L +Y A+I L +++E+MT +G V + +
Sbjct: 329 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 388
Query: 400 LLI------HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
LI R+ ARR + + P D C Y A+I AG ++A
Sbjct: 389 TLIMGYASEGRIEEARRLLDGMSCSGVAP-DIFC---YNAIISCLSKAGKMEEASTYLLE 444
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ +G+ P TF + G K G++++A Y E
Sbjct: 445 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 479
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 201/453 (44%), Gaps = 40/453 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGD 116
R G + TY T++ F A + + V LM+E+G + VT+ S+++ L AG
Sbjct: 37 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 96
Query: 117 VDGAVNIWEEMKLKECYPTIVSY----TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
++GA +++EM + P +VSY + Y K+ L+ E+ V+ EM QRGL P+
Sbjct: 97 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH----ESLAVFSEMTQRGLVPDVV 152
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T+T L+ +AG E+A+ + ++M+E G++ ++ LI+ CK G +L + M
Sbjct: 153 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 212
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
++ + + + + D + E I + +A + V D+ +I
Sbjct: 213 RKCGIQPSVVCYNALINGYCKLGRMD---------LARELIREMEA-KRVKPDVVTYSTI 262
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
G K NL + L ++ K + D+ S++I C+ +R + A FE +
Sbjct: 263 ISGYC----KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 318
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++ + + Y LI K K + +EM + G V ++LI+ L + R
Sbjct: 319 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 378
Query: 413 PAAK-IFSLLPED-----------QKCTA-----TYTALIGVYFSAGSADKALKIYKTMC 455
A + +F L ED C + + AL+ + G +A K+Y++M
Sbjct: 379 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 438
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ +++L+ G + G V A + K+
Sbjct: 439 DRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQ 471
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 157/389 (40%), Gaps = 54/389 (13%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P + +Y ++ L R++EA V +M G PN TY L+ RAG+ + A +
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 194 FSKMQEAG-VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF- 251
S M+E G +P+ N ++ CKAG + M LA + L +
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
KV ++SL V + + + D V F + L+ K NL +
Sbjct: 128 KVGCLHESL--AVFSEMTQRGLVP-DVVTFTS------------LIHATCKAGNLEQAVA 172
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
L++ + ++ ++++ + +I+ C D ALLA E K + Y ALI
Sbjct: 173 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 232
Query: 372 KLNTFPKVAEIVEEM-------------------TKAGH------------SLGVYLGAL 400
KL E++ EM K G+ GV A+
Sbjct: 233 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 292
Query: 401 ----LIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTM 454
LI L +R A ++F + + Q TYT LI + G+ +KAL ++ M
Sbjct: 293 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
RKG+ P + T++VL+ GL K R +A
Sbjct: 353 IRKGVLPDVVTYSVLINGLSKSARTKEAH 381
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A F+ + R G D +Y T+L + + + VF M ++G+ D VT+T
Sbjct: 97 MEGARKVFDEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 155
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA----YMKILFLNDRVKEATDVYKE 161
S++H AG+++ AV + +M+ + V++TA + K FL+D A +E
Sbjct: 156 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD----ALLAVEE 211
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
M + G+ P+ Y L+ + G+ + A E+ +M+ V+PD + +I CK G
Sbjct: 212 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 270
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 98/251 (39%), Gaps = 55/251 (21%)
Query: 13 KYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEK--AWLFFNWVSRSRGFNHDRF 67
K D A++L++ + +K D T + ++ + + + N +G D
Sbjct: 233 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 292
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY++++ E KR++ +FE M + G+ D TYT+++ G+V+ A+++ +EM
Sbjct: 293 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352
Query: 128 KLKECYPTIVSYT----------------------------------------------- 140
K P +V+Y+
Sbjct: 353 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 412
Query: 141 ---AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
A +K + +KEA VY+ M+ R + Y++L+ R G +AL +M
Sbjct: 413 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 472
Query: 198 QEAGVQPDKAA 208
+G P+ +
Sbjct: 473 LRSGFSPNSTS 483
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
K NLV +S+++G+ C R +GA F+ V+ L + +
Sbjct: 78 KPNLVTFNSMVNGL-------------------CKAGRMEGARKVFDEMVREGLAPDVVS 118
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y L+ K+ + + EMT+ G V LIH A A + + +
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
E + T+TALI + G D AL + M + GI PS+ +N L+ G KLGR+
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238
Query: 481 DA-EIYRK-EKKSIQADALS 498
A E+ R+ E K ++ D ++
Sbjct: 239 LARELIREMEAKRVKPDVVT 258
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 199/458 (43%), Gaps = 51/458 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFE---LMQEKGINIDAVTYTSVMHWLSNAGDV 117
G D+++Y T++D + R SM+ FE +M G+ +TY +++ + +
Sbjct: 389 GMRPDKYSYNTLIDGYC---REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ +W M + P +S + + LF + ++A +++KE + RGL N T+ +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L + G+ EA E+ +M+E PD L + CK G+ T ++ M+
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQ----VHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
A +F + +A + W +H + S +S N L
Sbjct: 566 APSVEMFNSFITGHFIAKQ-----WHKVNDIHSEMSARGLSPN-------------LVTY 607
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L+ K+ NL +L +++ + + + S ++ + D A L + V
Sbjct: 608 GALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVN 667
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPV 412
+D+ + G I K++ +V+ + HS V + ++I L + R
Sbjct: 668 IDM---------IPGCSISTIEIDKISHVVDTIADGNPHSANV-MWNVIIFGLCKSGRIA 717
Query: 413 PAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A +F LP++ TY++LI ++GS D+A + M G+ P++ T+
Sbjct: 718 DAKSLFESLRNKRFLPDN----FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY 773
Query: 467 NVLLAGLEKLGRVSDA-EIYRK-EKKSIQADALSKDAV 502
N L+ GL K G++S A ++ K + K I + ++ + +
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTL 811
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 75 IFGEAK--RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
IFG K RI+ K +FE ++ K D TY+S++H + +G +D A ++ + M
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P I++Y + + L + ++ A +++ ++ +G+ PN TY L++ + GK EA +
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+ KM E G+QP +ILI C G I +L M EN + Y +
Sbjct: 827 LKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITY 878
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 191/498 (38%), Gaps = 76/498 (15%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N+++++ P A ++ R G D FT M + R++ E M+
Sbjct: 190 LNKLVQSGDPGMAAMVYGQM--RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGM 247
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G+ ++ V Y +VM G + A I E ++ K P +V+YT +K + R++EA
Sbjct: 248 GLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEA 307
Query: 156 TDVYKEM--------------------IQR----------------GLPPNCYTYTVLME 179
V KEM QR G+ N + Y ++
Sbjct: 308 ERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMIN 367
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + G+ EE ++ +M++ G++PDK + N LI+ C+ G R + R M N LA
Sbjct: 368 GLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAA 427
Query: 240 RYPVFKEALQTF-KVADENDSL-LW--QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ L+ F + +D+L LW + +P IS +T ++G
Sbjct: 428 TTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS-------CSTLLDG------- 473
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L K +L + + + + +T+I C R A + ++
Sbjct: 474 ----LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI---------HRLG 406
+ Y L KL ++ +M G + V + I H++
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ A + L TY ALI + G+ +A +Y M G++P++
Sbjct: 590 DIHSEMSARGLSPNL-------VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFIC 642
Query: 467 NVLLAGLEKLGRVSDAEI 484
+ L++ K G+V +A +
Sbjct: 643 SALMSCFYKEGKVDEANL 660
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 175/448 (39%), Gaps = 53/448 (11%)
Query: 39 VLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
+L + PP + LF + R F ++ +L +A ++SS VF+ M + G
Sbjct: 122 LLSSLPPHAEP-LFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCR 180
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
+ +++ L +GD A ++ +M++ P + K + RV +A +
Sbjct: 181 PSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEF 240
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+EM GL N Y +M+ G E+A I +Q G+ P+ +L++ CK
Sbjct: 241 VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK 300
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
G +++ MKE T + + + ++ + D
Sbjct: 301 DGRMEEAERVVKEMKE---------------TGDIVVDEVAYGMMINGYCQRGRMDDATR 345
Query: 279 V--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
V E I L + ++ L K + + +L + D ++ D +T+I+ C
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405
Query: 337 DHRRRDGALL-AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R+G++ AFE M N L + NT K
Sbjct: 406 ----REGSMRKAFEMCRMMVRN-------GLAATTLTYNTLLK----------------- 437
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
G +H + A R + P + C+ L F AG ++AL ++K
Sbjct: 438 --GFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGL----FKAGKTEQALNLWKETL 491
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+G+ ++ TFN ++ GL K+GR+++AE
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAE 519
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R++ F D FTY++++ + I + ++M G+ + +TY S+++ L +G +
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL 786
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AVN++ +++ K P ++Y + + EA + ++M++ G+ P TY++L
Sbjct: 787 SRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSIL 846
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ L G EEA+++ +M E V P+ LI K+G I
Sbjct: 847 IYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 894
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 167/429 (38%), Gaps = 33/429 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + T+ T+++ + R++ + + + M+E D++TY ++ G +
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ +M+ P++ + +++ F+ + + D++ EM RGL PN TY L+
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ G EA ++ +M G+ P+ C+ L+ K G+ L+L+ +
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLV----- 666
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG-PLSID---Q 294
N ++ P S I + V T +G P S +
Sbjct: 667 ------------------NIDMI----PGCSISTIEIDKISHVVDTIADGNPHSANVMWN 704
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++ L K + SL + +K D+ S++I D A + +
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L Y +LI L K + + ++ G S LI + A
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+ + E+ Q TY+ LI + G ++A+K+ M + P+ T+ L+ G
Sbjct: 825 FKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884
Query: 473 LEKLGRVSD 481
K G + +
Sbjct: 885 YIKSGNMEE 893
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 74/146 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TY +++ ++ ++S +F +Q KGI+ + +TY +++ G
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + ++M + PT+++Y+ + L ++EA + +MI+ + PN TY L+
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP 204
+++G EE +++ +M G+ P
Sbjct: 883 HGYIKSGNMEEISKLYDEMHIRGLLP 908
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 9/175 (5%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D ++ + + C R A+ E M L + AY A++ + I+
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276
Query: 384 EEMTKAGHSLGVYLGALLIH------RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGV 437
E + + G S V LL+ R+ A R V K + D+ Y +I
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE---VAYGMMING 333
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
Y G D A ++ M GIH +L +N ++ GL KLGR+ + + +E + +
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV 388
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 201/488 (41%), Gaps = 27/488 (5%)
Query: 20 AQDLLKNLPIKWDSY-TVNQVLKTHPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFG 77
A D + + P SY TV T ++K + LF + R G D TYTT++D
Sbjct: 192 ADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDR--GIPPDVVTYTTVIDGLC 249
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+A+ + VF+ M + G+ + TY ++H + G V + EEM P
Sbjct: 250 KAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCC 309
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + + L N R +EA + MI +G+ P+ TY +++ G E ++ + M
Sbjct: 310 TYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM 369
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVA 254
G+ P+ NI K G + I M++ L A+ Y +AL
Sbjct: 370 VANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRV 429
Query: 255 DENDSLLWQ-VHPQFSPEFISDNDAV-----------------EFVTTDIEGPLSIDQGL 296
D+ + Q ++ +P+ + + V E + I + +
Sbjct: 430 DDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTI 489
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ L K+ ++ L+ I ++ D +T+I+ +C D A E V + L
Sbjct: 490 LCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGL 549
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ +Y L+ K +M G + GV ++H L +R A +
Sbjct: 550 KPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 609
Query: 417 IF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
++ +++ K TY ++ + D+A+K+++ +C KG+ ++ TFN+++ L
Sbjct: 610 LYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALL 669
Query: 475 KLGRVSDA 482
K GR DA
Sbjct: 670 KGGRKEDA 677
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 196/447 (43%), Gaps = 32/447 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +Y T++D A I + E M G+ D+ +Y +++H AG +D A
Sbjct: 513 GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA 572
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +M P +V+Y + LF R EA ++Y MI G + YTY +++
Sbjct: 573 YSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNG 632
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L ++ +EA+++F + G+Q + NI+I K G + + + N L
Sbjct: 633 LCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLV-- 690
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS-IDQGLVLI 299
+ + T+++ EN + EF S A+E T P S + LV
Sbjct: 691 -----QNVVTYRLVVEN-----LIEEGSLEEFDSLFSAMEKNGT---APNSQMLNALVRR 737
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV-NCDHRRRDGALLAFEYSVKMDLNL 358
LL + ++ + LS + +++ ++++ S +I + + D + L +Y + + N
Sbjct: 738 LLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANS 797
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
++ K + EM G + V ++H L R A +++
Sbjct: 798 S--------ALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELY 849
Query: 419 -SLL-PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
S++ Q TY ++ + D+A K+++++C KG+ ++ TFN+++ L K
Sbjct: 850 LSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKG 909
Query: 477 GRVSDA-EIYRKEKKSIQADALSKDAV 502
GR DA +++ +I A+ L D V
Sbjct: 910 GRKEDAMDLF----AAIPANGLVPDVV 932
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 203/469 (43%), Gaps = 38/469 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTY 104
+E + F + ++ G+ D +L+ + KR+ +M + + M E G D V+Y
Sbjct: 110 LEHGFAAFGLILKT-GWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSY 168
Query: 105 TSVMHWLSNAGDVDGAVNIWEEM---KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
++ L N + A+ + M ++ C P +VSY+ + F +V + +++ E
Sbjct: 169 NILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLE 228
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M+ RG+PP+ TYT +++ L +A ++ A +F +M + GV+P+ N LI G+
Sbjct: 229 MMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK 288
Query: 222 TRTIIL-------------------ILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
+ ++ +L Y+ +N F +++ + +
Sbjct: 289 WKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGI 348
Query: 263 QVHPQFSPEFISD-NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDK 319
+H + +S+ +D + + + P + K ++ A+D + + + +
Sbjct: 349 MLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMD-IFNKMRQQ 407
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ D+ +I+ C R D A + F + + + + +L+ L ++ + KV
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467
Query: 380 AEIVEEMTKAG-HSLGVYLGALLIH-----RLGSARRPVPAAKIFSLLPEDQKCTATYTA 433
E+ EM G H V+ +L + R+ +R V + + + P+ +Y
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPD----VISYNT 523
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
LI + AG+ D+A K+ + M G+ P ++N LL G K GR+ A
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA 572
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/475 (20%), Positives = 183/475 (38%), Gaps = 65/475 (13%)
Query: 15 STWDSAQDLLKNL---PIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFT 68
T D A LL+ + +K DS++ N +L + ++ A+ F + S G T
Sbjct: 532 GTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKM-LSNGITPGVVT 590
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T+L + KR S K ++ M G D TY +++ L + VD A+ +++ +
Sbjct: 591 YNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLC 650
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K I+++ + L R ++A D++ + GL N TY +++E L+ G E
Sbjct: 651 SKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLE 710
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
E +FS M++ G P+ N L+ + G+ L + E ++ +
Sbjct: 711 EFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLI 770
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
F +DE +Q H + P KK +
Sbjct: 771 SIFS-SDE-----YQHHAKSLP--------------------------------KKYRIL 792
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++ S ++ K+ RR D A F + L + Y ++
Sbjct: 793 NEANSSALIKKA------------------RRIDDAYSLFREMLMKGLTPDVVTYNTILH 834
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
L + F + E+ M + + +Y ++++ L + A K+F L Q
Sbjct: 835 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 894
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
T+ +IG G + A+ ++ + G+ P + T+ ++ L + G + +
Sbjct: 895 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEE 949
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 109/257 (42%), Gaps = 10/257 (3%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
D Q K+LP K+ + + ++K ++ A+ F + +G D TY T+L
Sbjct: 776 DEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREM-LMKGLTPDVVTYNTILH 834
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ R S K ++ M ++ TY +++ L + VD A +++ + K
Sbjct: 835 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 894
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
I+++ + L R ++A D++ + GL P+ TY ++ E L+ G EE +F
Sbjct: 895 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLF 954
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
M+++G D N L+ + + G+ L + E +L E + F
Sbjct: 955 LTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRG 1014
Query: 255 DENDSLLWQVHPQFSPE 271
+ +Q H + PE
Sbjct: 1015 E------YQHHAKSLPE 1025
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 187/464 (40%), Gaps = 57/464 (12%)
Query: 32 DSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D+++ N V+K+ ++A +++ G + D +YT ++ IS +
Sbjct: 235 DAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNL 294
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F M +KG+ + VTY S++H L A +D A + +M P V+YTA +
Sbjct: 295 FNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSC 354
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
R KEA ++KEM + GL P+ T+ LM+ L + + +EA EIF + G +PD +
Sbjct: 355 LGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIIS 414
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND-SLLWQVHPQ 267
+IL+ Y E R +F VAD + ++L H +
Sbjct: 415 YSILLHG---------------YATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAK 459
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
D + T++ G QG+ N+V
Sbjct: 460 RGMM-----DEALLIFTEMRG-----QGV------SPNVV-------------------T 484
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T+I C R A+ + + L Y +LI K E+V EM
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544
Query: 388 KAG-HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSA 444
G + + +IH L + R + A +F+L+ D+ T+ +LI Y G
Sbjct: 545 DQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKM 604
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
DKA + M G P + T++ L+ G K GR+ D I +E
Sbjct: 605 DKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFRE 648
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 184/443 (41%), Gaps = 57/443 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA FN + + +G + TY +++ +A+ + + V M + I D VTYT
Sbjct: 288 ISKACNLFNEMVQ-KGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H S G A +++EM + P IV++ + M L + R KEA +++ + +
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ +Y++L+ G++ + +F M + G+ D NILI K G
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466
Query: 226 ILILRYMKENRLA---LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+LI M+ ++ + Y AL + ++AD + L + P + + ++
Sbjct: 467 LLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQG 526
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI-QLDSAVISTIIEVNCDHRR 340
T + L+K K LV S +MD+ I + + S+II C+ R
Sbjct: 527 FCTHGD------------LIKAKELV------SEMMDQGIPRPNITFFSSIIHSLCNEGR 568
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
A F + + + + +LI + K +++ M AG V
Sbjct: 569 VMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDV----- 623
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
TY+ LI YF +G D L +++ M K +
Sbjct: 624 ----------------------------VTYSTLINGYFKSGRIDDGLILFREMLCKRVK 655
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P+ T++++L GL + GR S A+
Sbjct: 656 PTTVTYSLVLDGLFRAGRTSAAK 678
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FT+ +++D + ++ V + M G D VTY+++++ +G +D + ++
Sbjct: 587 DIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILF 646
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM K PT V+Y+ + LF R A ++ EMI+ G + TYT++++ L R
Sbjct: 647 REMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRN 706
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+EA+ +F K+ ++ + A N +I
Sbjct: 707 NCTDEAITLFHKLGAMNLKFEIAILNTMIH 736
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ +LD A R S+ K +F M E G + TYT ++ L D A+ ++ ++
Sbjct: 660 TYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKL 719
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
I + L+ R +EA D++ + GL PN TY V++ L++ G
Sbjct: 720 GAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSV 779
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
EEA +FS M++ G P N +I + GE
Sbjct: 780 EEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGE 813
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 153/354 (43%), Gaps = 37/354 (10%)
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+E R +P +TY +LM+ RA + + F+++ AG++ D N ++ C A
Sbjct: 154 EEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYA 213
Query: 220 GET-RTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHP--QFSPEFI 273
T + ++L M E A Y ++L + E +L ++ SP+ +
Sbjct: 214 KRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVV 273
Query: 274 SDNDAVEFVTTDIEGPLS---------IDQG----------LVLILLKKKNLVAIDSLLS 314
S + + +EG +S + +G +V L K + + + +L
Sbjct: 274 SYTMVIHGLF--MEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLR 331
Query: 315 GIMDKSIQLDSAVISTIIE-VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
+ D SIQ D + +I +C R ++ A + F+ + L + + +L+ L K
Sbjct: 332 QMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM-FKEMTREGLIPDIVTFNSLMDSLCKH 390
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE-----DQKCT 428
+ AEI + GH + ++L+H + R V +F + + D C
Sbjct: 391 KRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHC- 449
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ LI + G D+AL I+ M +G+ P++ T+ ++A L ++GR++DA
Sbjct: 450 --FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADA 501
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 89/199 (44%), Gaps = 3/199 (1%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+++++ R+ + + VF L+ G D T+ S++ G +D A + + M
Sbjct: 556 FSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMV 615
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +V+Y+ + F + R+ + +++EM+ + + P TY+++++ L RAG+
Sbjct: 616 SAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTS 675
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK--- 245
A ++F +M E+G + I+++ C+ T I + + L +
Sbjct: 676 AAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMI 735
Query: 246 EALQTFKVADENDSLLWQV 264
AL K +E L V
Sbjct: 736 HALYKVKRREEAHDLFASV 754
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 193/450 (42%), Gaps = 37/450 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S FN D Y +D FG+ ++ F ++ +G+ D VT+TS++ L A V
Sbjct: 264 KSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERV 323
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV ++EE+ + P + +Y + + EA + + ++G P+ Y +
Sbjct: 324 DEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCI 383
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L R GK EEAL I M+ P+ + NILI+ CKAGE + + MKE L
Sbjct: 384 LTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGL 442
Query: 238 ---ALRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ + + L + DE S+ + H +P D+V F + I+G
Sbjct: 443 FPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTP------DSVTFCSL-IDG----- 490
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN---CDHRRRDGALLAFEY 350
L + V +L M S Q +AV+ T + N C R+ DG + E
Sbjct: 491 -------LGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCG-RKEDGHKIYKEM 542
Query: 351 ---SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
DL L + + K K + EE+ G + V ++LIH L
Sbjct: 543 MHRGCSPDLMLLNN----YMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVK 598
Query: 408 ARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
K+F + E T Y +I + +G +KA ++ + M KG+ P++ T
Sbjct: 599 GGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVT 658
Query: 466 FNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
+ ++ GL K+ R+ +A + +E KS D
Sbjct: 659 YGSVIDGLAKIDRLDEAYMLFEEAKSKAVD 688
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 183/450 (40%), Gaps = 27/450 (6%)
Query: 61 GFNH-----DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
G +H D T+ +++D G +++ ++E M + G +AV YTS++ G
Sbjct: 471 GLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCG 530
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ I++EM + C P ++ YM +F +++ +++E+ +GL P+ +Y+
Sbjct: 531 RKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYS 590
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+L+ LV+ G ++ ++F +M+E G+ D A NI+I+ CK+G+ +L MK
Sbjct: 591 ILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTK 650
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS-IDQ 294
L + + D D + + + + + N V D G + ID+
Sbjct: 651 GLQPTVVTYGSVIDGLAKIDRLDE-AYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDE 709
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ +L +M K + ++ + +++ D AL+ F+ +
Sbjct: 710 AYL--------------ILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNL 755
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
Y ++ L K+ F K +EM K G +I L + A
Sbjct: 756 KCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEA 815
Query: 415 AKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+F +A Y A+I +A A A +++ KG T VLL
Sbjct: 816 KDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDA 875
Query: 473 LEKLGRVSDAEI----YRKEKKSIQADALS 498
L K + A I R+ KS A LS
Sbjct: 876 LHKADCLEQAAIVGAVLREMAKSQHATRLS 905
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 189/457 (41%), Gaps = 67/457 (14%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
LK M++A LF N + T M+D +A+R+ +F + K
Sbjct: 431 LKVQDSMKEAGLFPNII-----------TVNIMIDRLCKAQRLDEACSIFLGLDHKVCTP 479
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D+VT+ S++ L G V+ A ++E+M P V YT+ ++ F R ++ +Y
Sbjct: 480 DSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIY 539
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
KEM+ RG P+ M+ + +AG+ E+ +F +++ G+ PD + +ILI K
Sbjct: 540 KEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKG 599
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDA 278
G ++ + MKE L L + + F K N + +Q+
Sbjct: 600 GFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKA--YQL-------------- 643
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+E + T P + G V+ L ID L
Sbjct: 644 LEEMKTKGLQPTVVTYGSVI-----DGLAKIDRL-------------------------- 672
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
D A + FE + ++L Y +LI K+ + I+EE+ + G + Y
Sbjct: 673 ---DEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTW 729
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMC 455
L+ L A A F + ++ KC TY+ ++ +KA ++ M
Sbjct: 730 NCLLDALVKAEEIDEALVCFQNM-KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQ 788
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
++G+ P+ T+ +++GL ++G V +A +++ + K S
Sbjct: 789 KQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSS 825
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 93/169 (55%), Gaps = 1/169 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A++ F ++S+ + + Y++++D FG+ RI + E + +KG+ + T+
Sbjct: 672 LDEAYMLFEE-AKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWN 730
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L A ++D A+ ++ MK +C P V+Y+ + L + +A ++EM ++
Sbjct: 731 CLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQ 790
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
GL PN TYT ++ L R G EA ++F + + +G PD A N +IE
Sbjct: 791 GLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIE 839
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 4/198 (2%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A+L + + +G + +T+ +LD +A+ I F+ M+ + VTY+
Sbjct: 707 IDEAYLILEELMQ-KGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYS 765
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L + A W+EM+ + P ++YT + L V EA D+++
Sbjct: 766 IMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSS 825
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG--ETR 223
G P+ Y ++E L A K +A +F + + G + C +L++ KA E
Sbjct: 826 GGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885
Query: 224 TII-LILRYMKENRLALR 240
I+ +LR M +++ A R
Sbjct: 886 AIVGAVLREMAKSQHATR 903
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 112/588 (19%), Positives = 204/588 (34%), Gaps = 101/588 (17%)
Query: 1 MRDTISNVYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS 59
MR T+ +V ++L W +A +D L V V++ + A +F WV R
Sbjct: 66 MRKTVHDVCRVLDTYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVERK 125
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN------IDAVT---------- 103
H Y +L + + + ++ + E M G I+ V
Sbjct: 126 TKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLRE 185
Query: 104 -------------------YTSVMHWLSNA------------------------------ 114
YT+++ LS A
Sbjct: 186 AFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLIC 245
Query: 115 -----GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
G VD A+++ +EMK +V Y + +V A + E+ +GL P
Sbjct: 246 VFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVP 305
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ T+T ++ L +A + +EA+E+F ++ P A N +I G+ +L
Sbjct: 306 DDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLL 365
Query: 230 RYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT-- 284
K + Y L +E +L + +P S N ++ +
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAG 425
Query: 285 DIEGPLSIDQGL-------------VLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
++E L + + ++I L K + L S+ G+ K DS
Sbjct: 426 ELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFC 485
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++I+ H + + A + +E + Y +LI K +I +EM
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR 545
Query: 390 GHS-----LGVYLGALL-IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
G S L Y+ + + R K L P+ +Y+ LI G
Sbjct: 546 GCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPD----VRSYSILIHGLVKGGF 601
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ K++ M +G+H +N+++ G K G+V+ A +E K+
Sbjct: 602 SKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKT 649
>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 193/452 (42%), Gaps = 37/452 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A+ F V RG D Y+T++D + +A + +F KG+ +D V ++
Sbjct: 302 MDRAFDLFK-VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S + +GD+ A +++ M + P +V+YT +K L + R+ EA +Y ++++R
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG----- 220
G+ P+ TY+ L++ + G ++ M + G PD +L++ K G
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 221 ETRTIILILRYMKENRLAL--------RYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
++ ++ + ++ N + R F EAL+ F++ ++ + P +
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG-----IYGIKPDVAT-- 533
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+ V + + GL L L ++N I D AV + +I
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRN--------------KISADIAVCNVVI 579
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ R + A F ++ + + Y +I L + I E +
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKI 450
+LIH L A ++FS++ E + TY L+ + + + + K+
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M KGI PS+ ++++++ GL K GRV +A
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 22 DLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
DL++ I D N V+ K H +E A FFN + + D TY TM+ +
Sbjct: 561 DLMQRNKISADIAVCNVVIHLLFKCHR-IEDASKFFNNLIEGK-MEPDIVTYNTMICGYC 618
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+R+ + +FEL++ + VT T ++H L D+DGA+ ++ M K P V
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y M + ++ + +++EM ++G+ P+ +Y+++++ L + G+ +EA IF +
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+A + PD A ILI CK G L+ +M N
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F + T T ++ + + + +F +M EKG +AVTY +M W S + D++G+
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
++EEM+ K P+IVSY+ + L RV EAT+++ + I L P+ Y +L+
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 182 VRAGKYEEALEIFSKMQEAGVQPD 205
+ G+ EA ++ M GV+PD
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPD 781
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 182/415 (43%), Gaps = 30/415 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T+++ F + + +F++M+++GI D + Y++++ AG + ++ +
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K +V +++ + + + + A+ VYK M+ +G+ PN TYT+L++ L + G+
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA ++ ++ + G++P + LI+ CK G R+ + E+ + + YP +
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY----EDMIKMGYP--PDV 461
Query: 248 LQTFKVADENDSLLWQVHP-QFSPEFISDNDAVEFVTTD--IEGPLSIDQGLVLILLKKK 304
+ + D +H +FS + + + + V + I+G +++ LK
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR--FDEALKVF 519
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVN------CDHRRRDGALLAFEYSVKMDLNL 358
L+ I I+ D A +T++ V+ C H + L F+ + ++
Sbjct: 520 RLMGI---------YGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISA 570
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ +I +L K + ++ + + + +I S RR A +IF
Sbjct: 571 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 630
Query: 419 SLL---PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
LL P T T T LI V D A++++ M KG P+ T+ L+
Sbjct: 631 ELLKVTPFGPN-TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 22 DLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
+LLK P ++ T+ VL + M+ A F+ ++ +G + TY ++D F +
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSK 689
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+ I +FE MQEKGI+ V+Y+ ++ L G VD A NI+ + + P +V+
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 749
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
Y ++ R+ EA +Y+ M++ G+ P+ L EY
Sbjct: 750 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEY 791
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/404 (18%), Positives = 172/404 (42%), Gaps = 38/404 (9%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ L+ + G + VT+ ++++ G++D A ++++ M+ + P +++Y+ + F
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ ++ + + +G+ + ++ ++ V++G A ++ +M G+ P+
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSL-LWQ-- 263
ILI+ C+ G + + + + + + F K + L++
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
+ + P+ + V+ ++ QGL+L ++ ++ +SI+L
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSK---------QGLMLHAMR---------FSVKMLGQSIRL 494
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFE----YSVKMDLNLERTAYLALIGILIKLNTF--- 376
+ V +++I+ C R D AL F Y +K D+ + ++ + I + F
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV----ATFTTVMRVSIMEDAFCKH 550
Query: 377 --PKVA-EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATY 431
P + ++ + M + S + + ++IH L R A+K F+ L E + TY
Sbjct: 551 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 610
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+I Y S D+A +I++ + P+ T +L+ L K
Sbjct: 611 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 654
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/409 (18%), Positives = 162/409 (39%), Gaps = 37/409 (9%)
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
L+ E+G + V+ V+ LS ++ A + + P +V++ +
Sbjct: 241 RLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ A D++K M QRG+ P+ Y+ L++ +AG ++FS+ GV+ D
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHP 266
+ I+ K+G+ T ++ + M ++ + Y + + L D +++
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC-------QDGRIYEAFG 412
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ + + +E + L+ K NL + +L ++ D
Sbjct: 413 MYG----------QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 327 VISTIIEVNCDHRRRDGALL-AFEYSVKM---DLNLERTAYLALIGILIKLNTFPKVAEI 382
+ ++ D + G +L A +SVKM + L + +LI +LN F + ++
Sbjct: 463 IYGVLV----DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 383 VEEMTKAG--HSLGVYLGALLIHRLGSA----RRPVPAAKIFSLLPEDQKCT--ATYTAL 434
M G + + + + + A +P ++F L+ ++ A +
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 578
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
I + F + A K + + + P + T+N ++ G L R+ +AE
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 199/458 (43%), Gaps = 51/458 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFE---LMQEKGINIDAVTYTSVMHWLSNAGDV 117
G D+++Y T++D + R SM+ FE +M G+ +TY +++ + +
Sbjct: 389 GMRPDKYSYNTLIDGYC---REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ +W M + P +S + + LF + ++A +++KE + RGL N T+ +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L + G+ EA E+ +M+E PD L + CK G+ T ++ M+
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQ----VHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
A +F + +A + W +H + S +S N L
Sbjct: 566 APSVEMFNSFITGHFIAKQ-----WHKVNDIHSEMSARGLSPN-------------LVTY 607
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L+ K+ NL +L +++ + + + S ++ + D A L + V
Sbjct: 608 GALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVN 667
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPV 412
+D+ + G I K++ +V+ + HS V + ++I L + R
Sbjct: 668 IDM---------IPGCSISTIEIDKISHVVDTIADGNPHSANV-MWNVIIFGLCKSGRIA 717
Query: 413 PAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A +F LP++ TY++LI ++GS D+A + M G+ P++ T+
Sbjct: 718 DAKSLFESLRNKRFLPDN----FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITY 773
Query: 467 NVLLAGLEKLGRVSDA-EIYRK-EKKSIQADALSKDAV 502
N L+ GL K G++S A ++ K + K I + ++ + +
Sbjct: 774 NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTL 811
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/498 (21%), Positives = 191/498 (38%), Gaps = 76/498 (15%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N+++++ P A ++ R G D FT M + R++ E M+
Sbjct: 190 LNKLVQSGDPGMAAMVYGQM--RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGM 247
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G+ ++ V Y +VM G + A I E ++ K P +V+YT +K + R++EA
Sbjct: 248 GLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEA 307
Query: 156 TDVYKEM--------------------IQR----------------GLPPNCYTYTVLME 179
V KEM QR G+ N + Y ++
Sbjct: 308 ERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMIN 367
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + G+ EE ++ +M++ G++PDK + N LI+ C+ G R + R M N LA
Sbjct: 368 GLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAA 427
Query: 240 RYPVFKEALQTF-KVADENDSL-LW--QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ L+ F + +D+L LW + +P IS +T ++G
Sbjct: 428 TTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS-------CSTLLDG------- 473
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L K +L + + + + +T+I C R A + ++
Sbjct: 474 ----LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI---------HRLG 406
+ Y L KL ++ +M G + V + I H++
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ A + L TY ALI + G+ +A +Y M G++P++
Sbjct: 590 DIHSEMSARGLSPNL-------VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFIC 642
Query: 467 NVLLAGLEKLGRVSDAEI 484
+ L++ K G+V +A +
Sbjct: 643 SALMSCFYKEGKVDEANL 660
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 176/453 (38%), Gaps = 53/453 (11%)
Query: 34 YTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ 93
+ +L + PP + LF + R F ++ +L +A ++SS VF+ M
Sbjct: 117 HDARALLSSLPPHAEP-LFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMG 175
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
+ G + +++ L +GD A ++ +M++ P + K + RV
Sbjct: 176 KVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVA 235
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+A + +EM GL N Y +M+ G E+A I +Q G+ P+ +L+
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
+ CK G +++ MKE T + + + ++ +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKE---------------TGDIVVDEVAYGMMINGYCQRGRM 340
Query: 274 SDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
D V E I L + ++ L K + + +L + D ++ D +T+
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400
Query: 332 IEVNCDHRRRDGALL-AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
I+ C R+G++ AFE M N L + NT K
Sbjct: 401 IDGYC----REGSMRKAFEMCRMMVRN-------GLAATTLTYNTLLK------------ 437
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
G +H + A R + P + C+ L F AG ++AL +
Sbjct: 438 -------GFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGL----FKAGKTEQALNL 486
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+K +G+ ++ TFN ++ GL K+GR+++AE
Sbjct: 487 WKETLARGLAKNVITFNTVINGLCKIGRMAEAE 519
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 75 IFGEAK--RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
IFG K RI+ K +FE ++ K D TY+S++H + +G +D A ++ + M
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P I++Y + + L + ++ A +++ ++ +G+ PN TY L++ + GK EA +
Sbjct: 767 TPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFK 826
Query: 193 IFSKMQEAG 201
+ KM E G
Sbjct: 827 LKQKMVEEG 835
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%)
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
I + +V + + + + V + ++ L +G + A +++E ++ K P +Y++
Sbjct: 681 IDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSS 740
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ + + EA + M+ GL PN TY L+ L ++GK A+ +F+K+Q G
Sbjct: 741 LIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800
Query: 202 VQPDKAACNILIEKCCKAGET 222
+ P+ N LI++ CK G+T
Sbjct: 801 ISPNGITYNTLIDEYCKEGKT 821
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 83/172 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + T+ T+++ + R++ + + + M+E D++TY ++ G +
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ +M+ P++ + +++ F+ + + D++ EM RGL PN TY L+
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
+ G EA ++ +M G+ P+ C+ L+ K G+ L+L+
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R++ F D FTY++++ + I + ++M G+ + +TY S+++ L +G +
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL 786
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYM----------------KILFLNDRVKEATDVYKE 161
AVN++ +++ K P ++Y + + + ++EA + +
Sbjct: 787 SRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQ 846
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
MI+ + PN TY L+ +++G EE +++ +M G+ P
Sbjct: 847 MIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 9/175 (5%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D ++ + + C R A+ E M L + AY A++ + I+
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276
Query: 384 EEMTKAGHSLGVYLGALLIH------RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGV 437
E + + G S V LL+ R+ A R V K + D+ Y +I
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE---VAYGMMING 333
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
Y G D A ++ M GIH +L +N ++ GL KLGR+ + + +E + +
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV 388
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 116/550 (21%), Positives = 218/550 (39%), Gaps = 112/550 (20%)
Query: 22 DLLKNLPIKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D ++ I D YT N ++ + ++A F+ + R+ GF D+ T ++LD++G+
Sbjct: 236 DSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEM-RAAGFEPDKVTLNSLLDVYGK 294
Query: 79 AKR--------------------------ISS---------MKYVFELMQEKGINIDAVT 103
A+R ISS + E M+ KGI D +T
Sbjct: 295 ARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVIT 354
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI----------LFLNDRVK 153
YT+++ L AG +D A+ + EM C P + +Y A +K+ + + D ++
Sbjct: 355 YTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIR 414
Query: 154 -------------------------EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
E + V+KEM + G P TY L+ R G ++
Sbjct: 415 SAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFD 474
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFK 245
+A+EI+ +M EAG+ PD + N ++ + G + + + + L Y
Sbjct: 475 QAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLL 534
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
A K D+ SL ++ + IE + + LVL+ K N
Sbjct: 535 HAYANAKKLDKMKSLSEDIYAE-----------------RIESHNGLVKTLVLVNSKVNN 577
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM----DLNLERT 361
L + + + LD V++ +I + ++G + E + + +NL
Sbjct: 578 LSDTEKAFLELRRRRCSLDINVLNAMISIYG----KNGMVKKVEEILSLMKESSINLSTA 633
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +L+ + +L K I+ E+ + Y +I+ G + A+++FS
Sbjct: 634 TYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFS-- 691
Query: 422 PEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ KC+ TY + Y + ++A+ + + M G P+ T+N +L
Sbjct: 692 --EMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCS 749
Query: 476 LGRVSDAEIY 485
GR++D + +
Sbjct: 750 HGRIADGKSF 759
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 167/394 (42%), Gaps = 66/394 (16%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV----KEA 155
DA YT+++ LS A AV ++ M P +V+Y +L + ++ KE
Sbjct: 175 DASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNV---VLHVYSKIAVPWKEV 231
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ M + G+P + YTY L+ R Y+EA ++F +M+ AG +PDK N L++
Sbjct: 232 LALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDV 291
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
KA I +L+ M++ + + ++ D LL + Q E
Sbjct: 292 YGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYV----KDGLLEEA-TQLKEEM--- 343
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
V+ + D+ + +L+SG +D++ ++D+A I T E+
Sbjct: 344 --EVKGIEPDV--------------------ITYTTLVSG-LDRAGKIDAA-IGTYNEM- 378
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R+G K +L Y ALI + FP++ + +E+ AG V
Sbjct: 379 ----LRNG--------CKPNL----CTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDV 422
Query: 396 YLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALK 449
L+ G + +F +PE TY +LI Y G D+A++
Sbjct: 423 VTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERD----TYVSLISSYSRCGLFDQAME 478
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
IYK M GIHP + T+N +L+ L + GR AE
Sbjct: 479 IYKRMIEAGIHPDISTYNAVLSALARGGRWEQAE 512
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 76/199 (38%), Gaps = 39/199 (19%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
VN + EKA+L R R + D M+ I+G+ + ++ + LM+E
Sbjct: 571 VNSKVNNLSDTEKAFLEL----RRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKES 626
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNI-------------------------------- 123
IN+ TY S+MH S GD + NI
Sbjct: 627 SINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEA 686
Query: 124 ---WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EMK P IV+Y ++K N +EA D+ + M+ G PN TY +++
Sbjct: 687 SRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQE 746
Query: 181 LVRAGKYEEALEIFSKMQE 199
G+ + S + E
Sbjct: 747 YCSHGRIADGKSFISNLPE 765
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 123/539 (22%), Positives = 216/539 (40%), Gaps = 65/539 (12%)
Query: 2 RDTISNVYKIL-KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS--- 57
R TI + L K W A ++L+ D+ Q++ + +A LF +S
Sbjct: 239 RSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISG---LMEASLFNEAMSFLH 295
Query: 58 --RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
R + TY T+L F + K+ K + +M +G N + + S++H NAG
Sbjct: 296 RMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAG 355
Query: 116 D-----------------------------------------VDGAVNIWEEMKLKECYP 134
D +D ++EEM C
Sbjct: 356 DYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVL 415
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
V+ + + L + ++A + KEM+++G P+ TYT ++ +L +A K E++ +F
Sbjct: 416 NKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLF 475
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEA-LQT 250
+M+ AGV PD ILI+ CKAG + R+ +R + + + Y A L++
Sbjct: 476 QEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKS 535
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT--DIEGPLSIDQGLVLILLKKKNLVA 308
++ +D V P ++ + ++ + +I+ + + L+ V
Sbjct: 536 KQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI----GTSGNVE 591
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
D G +I + +I+ C ++ A + + + Y ALI
Sbjct: 592 SDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALID 651
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
K+ E+ MTK G+ V+ LI R+ R A K+ S + D C
Sbjct: 652 GFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDS-CN 710
Query: 429 ---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TYTA+I G +KAL + M KG P++ T+ L+ GL K G+ +DA +
Sbjct: 711 PNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGK-ADASL 768
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 203/500 (40%), Gaps = 87/500 (17%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EK++L F + R+ G N D +TYT ++D F +A I + F+ M+ G + + VTYT
Sbjct: 468 VEKSFLLFQEMKRA-GVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYT 526
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H + + A +I+ M CYP V+Y+A + L +++A +VY+++I
Sbjct: 527 ALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGT 586
Query: 166 G----------------LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ PN TY L++ L +A K +A E+ M AG +P++
Sbjct: 587 SGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVY 646
Query: 210 NILIEKCCKAGETRT--------------------IILILRYMKENRLALRYPVFKEALQ 249
+ LI+ CK G+ LI R K+ RL L V E L
Sbjct: 647 DALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML- 705
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT--DIEGPLSIDQGLVLILLKKK--- 304
NDS +P ++ ++ ++ +IE L++ L L+++K
Sbjct: 706 -------NDSC--------NPNVVTYTAMIDGLSKVGEIEKALNL-----LSLMEEKGCS 745
Query: 305 -NLVAIDSLLSGI-----MDKSIQL-----------DSAVISTIIEVNCDHRRRDGALLA 347
N+V +L+ G+ D S++L + +I C D A L
Sbjct: 746 PNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLL 805
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+ Y + K F ++EEM + +LI
Sbjct: 806 LDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSK 863
Query: 408 ARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
A R A ++ L E + T Y +LI A ++A +Y M RKGI P
Sbjct: 864 AGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPD 923
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
L F L+ GL ++ + +A
Sbjct: 924 LIVFVSLVKGLIEVNKWDEA 943
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 165/413 (39%), Gaps = 16/413 (3%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V+E M ++ V + L G + A I +EM K P +YT + L
Sbjct: 404 VYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLC 463
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+V+++ +++EM + G+ P+ YTYT+L++ +AG E+A F +M+ G P+
Sbjct: 464 QAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVV 523
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEAL----QTFKVADENDSL 260
L+ K+ + I M + A+ Y + L + K + + L
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKL 583
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
+ S + ND T I + L+ L K + + LL ++
Sbjct: 584 IGTSGNVESDFYFEGND-----TCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAG 638
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
+ + V +I+ C + D A F K Y +LI + K
Sbjct: 639 CEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGV 437
+++ EM + V +I L A + SL+ E++ C+ TYTALI
Sbjct: 699 KVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLM-EEKGCSPNVVTYTALIDG 757
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
G AD +LK++K M KG P+ T+ VL+ G + +A + E K
Sbjct: 758 LGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMK 810
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 102/507 (20%), Positives = 185/507 (36%), Gaps = 50/507 (9%)
Query: 8 VYKILKYSTWDSAQD---LLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRG 61
V + ++ WD A + LK+ + + T N QVL + +E + +S S G
Sbjct: 176 VRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS-G 234
Query: 62 FNHDRFTYTTMLDIFGEA-KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
F DR T + F +A ++ +++++ N+D V T ++ L A + A
Sbjct: 235 FCMDRST----IGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEA 290
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M+ C P +V+Y + + + M+ G PN + L+
Sbjct: 291 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHG 350
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE--TRTIILILRYMKENRLA 238
AG Y A ++F++M G P A NI I C E ++ ++ + E LA
Sbjct: 351 YCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLA 410
Query: 239 LRYPVFKEALQTFKVA----DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ K F + + + F+ D V T + +++
Sbjct: 411 ASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEK 470
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+L K+ V D + +I +DS + +IE A F+ +
Sbjct: 471 SFLLFQEMKRAGVNPD-----VYTYTILIDSFCKAGLIE---------QARSWFDEMRSV 516
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ Y AL+ +K + +I M A + LI L A A
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKA 576
Query: 415 AKIFSLL-------------PEDQKCT-----ATYTALIGVYFSAGSADKALKIYKTMCR 456
+++ L + CT TY ALI A A ++ M
Sbjct: 577 CEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLA 636
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G P+ ++ L+ G K+G++ +A+
Sbjct: 637 AGCEPNQIVYDALIDGFCKIGKIDNAQ 663
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 155/401 (38%), Gaps = 37/401 (9%)
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+W E ++ + T Y A +IL D + A + +E+ + VL+
Sbjct: 122 LWAERQVGYSH-TGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCC 180
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL-RY 241
R G ++EALE ++++ G +P N L++ AG+ + + M + + R
Sbjct: 181 RHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRS 240
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFS------PEFISD-------NDAVEFV-----T 283
+ A KV D+L F+ + IS N+A+ F+
Sbjct: 241 TIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCN 300
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ I ++ + L+ LKKK +++ +M + + ++ ++++ C+
Sbjct: 301 SCIPNVVTY-RTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAY 359
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK------VAEIVEEMTKAGHSLGVYL 397
A F AY IG + P V ++ EEM A L
Sbjct: 360 AYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVN 419
Query: 398 GALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
A L + A +I +P+ T+TYT +I A +K+ ++
Sbjct: 420 TANFSRCLCGVGKFEKAFQILKEMMRKGFVPD----TSTYTKVITFLCQAKKVEKSFLLF 475
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
+ M R G++P + T+ +L+ K G + A + E +S+
Sbjct: 476 QEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSV 516
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 175/427 (40%), Gaps = 25/427 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y+ ++ + RI + + + M G+ D Y +++ LS AG ++ A
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
E++ + P V++ A++ ++ EA + EM+ GL PN YTVL+
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AG EAL IF ++ GV PD C+ I K G + + + +KE L
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F E + +++H + + I+ N + I LV L
Sbjct: 648 VFTYSSLISGFCKQGEVEK-AFELHDEMCLKGIAPN-------------IFIYNALVDGL 693
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K ++ L G+ +K ++ DS ST+I+ C A F +
Sbjct: 694 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 753
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-- 418
Y AL+ K K + EM + G + + L+ S + A+++F
Sbjct: 754 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ-EASQLFQE 812
Query: 419 ----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
++P+ TYT +I + AG ++A ++K M + + T+ L+ G
Sbjct: 813 MIAKQIMPDH----VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYN 868
Query: 475 KLGRVSD 481
KLG+ S+
Sbjct: 869 KLGQSSE 875
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 188/446 (42%), Gaps = 31/446 (6%)
Query: 46 MEKAWLFFNWVSRSR-GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
ME W +N + ++ GF D +TYT ++ + + K V M EKG+N + Y
Sbjct: 209 MELFWKVYNGMLDAKMGF--DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIY 266
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+ V+ + GD+D AV + M K P +YT L R+ EA ++EM +
Sbjct: 267 SLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK 326
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
GL P+ + L++ +R G +E L I M G+ + N+LI CK G+
Sbjct: 327 TGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEK 386
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
IL+ M + L K +TF + E + + + E + + + V
Sbjct: 387 AAEILKGM----VTLGC---KPNSRTFCLLIE--GYCREHNMGRALELLDEMEKRNLV-- 435
Query: 285 DIEGPLSIDQG-LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
P ++ G ++ L K+L + LL + ++ + V S +I R +
Sbjct: 436 ----PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEE 491
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLI 402
A + + + Y A+I L K + + + E+ G V GA ++
Sbjct: 492 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 551
Query: 403 HRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
+ + AAK F L+P + YT LI +F AG+ +AL I++ +
Sbjct: 552 GYSKTGKM-TEAAKYFDEMLDHGLMPNN----PLYTVLINGHFKAGNLMEALSIFRRLHA 606
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
G+ P + T + + GL K GRV +A
Sbjct: 607 LGVLPDVQTCSAFIHGLLKNGRVQEA 632
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 159/404 (39%), Gaps = 52/404 (12%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R+ VF ++EKG+ D TY+S++ G+V+ A + +EM LK P I Y
Sbjct: 628 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 687
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
A + L + ++ A ++ M ++GL P+ TY+ +++ ++ EA +F +M
Sbjct: 688 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 747
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
GVQP N L+ CCK G+ + +F+E LQ
Sbjct: 748 GVQPHSFVYNALVHGCCKEGDMEKAM---------------NLFREMLQK---------- 782
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
F TT LS + L+ K + L ++ K
Sbjct: 783 -------------------GFATT-----LSFNT-LIDGYCKSCKIQEASQLFQEMIAKQ 817
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I D +T+I+ +C + + A L F+ + +L ++ Y +L+ KL +V
Sbjct: 818 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVY 438
+ E+M G L+I+ V A K+ + T + LI
Sbjct: 878 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 937
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+A K+ M G+ PSL N L+ + G++ +A
Sbjct: 938 CKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEA 981
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TYTT++D +A ++ +F+ MQE+ + +D VTYTS+M+ + G ++
Sbjct: 821 DHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALF 880
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+M K P V+Y + D + EA + E++ +G+ + +L+ L +
Sbjct: 881 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 940
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
EA ++ +M E G++P AACN L+ +AG+
Sbjct: 941 EDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGK 977
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 169/426 (39%), Gaps = 24/426 (5%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++D + + VF + + I I + S++ L G ++ ++ M
Sbjct: 161 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGML 220
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ + +YT + L ++ A V EM ++GL PN + Y++++E + + G +
Sbjct: 221 DAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDID 280
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA+E+ M E G+ P+ I+ C+A L M++ L Y +
Sbjct: 281 EAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
F + D +L + +S + +T ++ L+ L K +
Sbjct: 341 DGFMREGDIDEVL-----RIKDVMVSCGIPINLITYNV---------LIHGLCKFGKMEK 386
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+L G++ + +S +IE C AL + K +L +Y A+I
Sbjct: 387 AAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMIN 446
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI------HRLGSARRPVPAAKIFSLLP 422
L +++E+MT +G V + ++LI R+ ARR + + P
Sbjct: 447 GLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAP 506
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ Y A+I AG ++A + +G+ P TF + G K G++++A
Sbjct: 507 D----IFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 562
Query: 483 EIYRKE 488
Y E
Sbjct: 563 AKYFDE 568
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 174/459 (37%), Gaps = 53/459 (11%)
Query: 27 LPIKWDSYTV-NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+PI +Y V L MEKA + + G + T+ +++ + +
Sbjct: 364 IPINLITYNVLIHGLCKFGKMEKAAEILKGMV-TLGCKPNSRTFCLLIEGYCREHNMGRA 422
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ + M+++ + AV+Y ++++ L + D+ A + E+M P +V Y+ +
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMA 482
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
R++EA + M G+ P+ + Y ++ L +AGK EEA ++Q G++PD
Sbjct: 483 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 542
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
IL Y K ++ F E L D L +
Sbjct: 543 AVTFG---------------AFILGYSKTGKMTEAAKYFDEML---------DHGLMPNN 578
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
P + T I G K NL+ S+ + + D
Sbjct: 579 PLY--------------TVLINGH-----------FKAGNLMEALSIFRRLHALGVLPDV 613
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
S I + R AL F + L + Y +LI K K E+ +E
Sbjct: 614 QTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 673
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGS 443
M G + +++ L+ L + A K+F +PE + + TY+ +I Y + +
Sbjct: 674 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 733
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+A ++ M KG+ P +N L+ G K G + A
Sbjct: 734 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 772
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 183/441 (41%), Gaps = 55/441 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M+KA+ +N + +++ + F +++ + +A+ +F+ GI + TY
Sbjct: 380 MDKAYEIYNQM-KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYN 437
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ WL G + A +IWE+M K P++VSY + + A V+ EM+++
Sbjct: 438 SLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEK 497
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN TY+VLM+ + G E A ++ +M+ + P CNI+I CKAG T
Sbjct: 498 GLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT--- 554
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE-FVTT 284
++ D L V F P ++ N ++ FV
Sbjct: 555 ----------------------------SESQDRLKKLVQEGFIPTCMTYNCIIDGFVK- 585
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
EG S++ L ++ + + + + + +I C D A
Sbjct: 586 --EG--SVNSAL--------------AVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLA 627
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
L + + L+ T Y ALI + ++++ E+ + G S + + +I
Sbjct: 628 LKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISG 687
Query: 405 LGSARRPVPAAKIFS-LLPEDQKCT-ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
+ A + ++ E C YT LI G A ++Y M KGI P
Sbjct: 688 FRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747
Query: 463 LGTFNVLLAGLEKLGRVSDAE 483
L T++VL+ GL G++ +A+
Sbjct: 748 LITYSVLIHGLCNKGQLENAQ 768
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 197/464 (42%), Gaps = 27/464 (5%)
Query: 24 LKNLPIKWDSYTVNQV----LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
+KN I + VN + LK P E + LF V+ + FTY ++L +
Sbjct: 390 MKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA---NVFTYNSLLSWLCKE 446
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
++S ++E M KG+ V+Y +++ GD+D A ++ EM K P +++Y
Sbjct: 447 GKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITY 506
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+ M F + A +Y M + P+ +T +++ L +AG+ E+ + K+ +
Sbjct: 507 SVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQ 566
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
G P N +I+ K G + + + M + ++ + + F ++ D
Sbjct: 567 EGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDL 626
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
L + E IE +++ L+ +K ++V LLS + +
Sbjct: 627 ALKVMD--------------EMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEV 672
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ + V S++I + + AL + + + + Y LI L+K
Sbjct: 673 GLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFA 732
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC-TAT---YTALI 435
+E+ EM G + ++LIH L + + A KI + D+KC T T Y LI
Sbjct: 733 SELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM--DRKCMTPTVFIYNTLI 790
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+F G+ +A +++ M KG+ P T+++L+ G K G +
Sbjct: 791 TGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 196/488 (40%), Gaps = 82/488 (16%)
Query: 25 KNLPIKWDSYT-----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF--- 76
K+ P DS+ ++ +L + A +F W S+ RG +L I
Sbjct: 52 KSAPTSQDSFLTQTQYIDTLLNHQNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKS 111
Query: 77 ----GEAK----RISSMKY------VFELMQEKGINIDAVTYTSVMHWLSNA----GDVD 118
G+A+ R +S + V + E +D + + V ++L N+ ++
Sbjct: 112 TETCGKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRIN 171
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV+ + + K+ P + ++ L N+ ++EA DVY +M +G+ +C T +V++
Sbjct: 172 DAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMI 231
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+R GK EEA F + + GV+ D A +I+IE CK ++ + +LR M++
Sbjct: 232 RASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKG-- 289
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
W H E + T + G + + QG +L
Sbjct: 290 -----------------------WVPH--------------EVIFTRVIG-VCMKQGKML 311
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+K K ++ ++ V +T+++ C D AL F+ + +
Sbjct: 312 EAVKVK---------GEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICP 362
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y +I K K EI +M S V+ LI AR P A+K+F
Sbjct: 363 NNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLF 422
Query: 419 SLLPEDQKC----TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
E C TY +L+ G +A I++ M RKG+ PS+ ++N ++ G
Sbjct: 423 D---EAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHC 479
Query: 475 KLGRVSDA 482
+ G + A
Sbjct: 480 QQGDMDSA 487
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 181/452 (40%), Gaps = 57/452 (12%)
Query: 37 NQVLKTHPPMEKAWLFFNWVSRSRGF--NHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
N++L M K L + R + ++D ++Y +++ F ++ V M +
Sbjct: 68 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 127
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G D VT +S+++ + + AV + ++M + E P V++ + LFL+++ E
Sbjct: 128 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 187
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A + M+ RG P+ +TY ++ L + G + AL + KM++ ++ D +I+
Sbjct: 188 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 247
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSP 270
C + + M + + ++ + +D + L + + +P
Sbjct: 248 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 307
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ V F L+ +K+ LV + L ++ +SI D S+
Sbjct: 308 ------NVVTF------------SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 349
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I C H R D A FE + D Y LI K + E+ EM++ G
Sbjct: 350 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 409
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+G+ T TY LI F AG D A KI
Sbjct: 410 -------------LVGN--------------------TVTYNTLIQGLFQAGDCDMAQKI 436
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+K M G+ P + T+++LL GL K G++ A
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 468
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 9/219 (4%)
Query: 11 ILKYSTWDSAQDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ + S ++ +K +E L+ + RS +
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS--ID 341
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY+++++ F R+ K++FELM K + VTY +++ A V+ + +
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 401
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+Y ++ LF A ++K+M+ G+PP+ TY++L++ L +
Sbjct: 402 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 461
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
GK E+AL +F +Q++ ++PD NI+IE CKAG+
Sbjct: 462 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 500
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 103/178 (57%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N + T++ ++D F + ++ + +++ M ++ I+ D TY+S+++ +D
Sbjct: 303 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 362
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++E M K+C+P +V+Y +K RV+E ++++EM QRGL N TY L++
Sbjct: 363 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 422
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L +AG + A +IF KM GV PD +IL++ CK G+ +++ Y++++++
Sbjct: 423 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 91/168 (54%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++ F +AKR+ +F M ++G+ + VTY +++ L AGD D A I+++M
Sbjct: 381 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 440
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P I++Y+ + L ++++A V++ + + + P+ YTY +++E + +AGK
Sbjct: 441 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 500
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
E+ ++F + GV+P+ +I C+ G + R MKE+
Sbjct: 501 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 548
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+ F +S+ RG + TY T++ +A + +F+ M G+ D +TY+
Sbjct: 395 VEEGMELFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 453
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G ++ A+ ++E ++ + P I +Y ++ + +V++ D++ + +
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 513
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI------------ 213
G+ PN YT ++ R G EEA +F +M+E G P+ N LI
Sbjct: 514 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 573
Query: 214 -------EKCCKAGETRTIILILRYMKENRLALRY 241
C G+ TI +++ + + RL Y
Sbjct: 574 AELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 608
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 98/525 (18%), Positives = 205/525 (39%), Gaps = 54/525 (10%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ K+ S + ++NL I +D Y+ N ++ + L + + G+
Sbjct: 71 LSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 130
Query: 63 NHDRFTYTTMLDIFGEAKRISS----------MKY------------------------- 87
D T +++L+ + KRIS M+Y
Sbjct: 131 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 190
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ + M +G D TY +V++ L GD+D A+++ ++M+ + +V YT + L
Sbjct: 191 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 250
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
V +A +++ EM +G+ PN TY L+ L G++ +A + S M E + P+
Sbjct: 251 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 310
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+ LI+ K G+ + M + + + + F + D D
Sbjct: 311 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 370
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
S + + + +++G+ L + G++ ++ ++ +
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR---------GLVGNTVTYNTLI 421
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+CD ++ F+ V + + Y L+ L K K + E +
Sbjct: 422 QGLFQAGDCDMAQK-----IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 476
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
K+ +Y ++I + A + +F L + YT +I + G +
Sbjct: 477 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 536
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLL-AGLEKLGRVSDAEIYRKEK 489
+A +++ M G P+ GT+N L+ A L + + AE+ ++ +
Sbjct: 537 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 581
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 162/390 (41%), Gaps = 35/390 (8%)
Query: 129 LKECYPTIVSYTAYMKI---LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
L+ Y + SY K+ + L+ ++ +A D++ EM+Q P+ + L+ + +
Sbjct: 19 LRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMN 78
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE----------N 235
K++ + + +MQ + D + NILI C+ + + +L M + +
Sbjct: 79 KFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLS 138
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQ---------VHPQFSPEFISDNDAV--EFVTT 284
L Y K + + D+ + +Q +H F S+ A+ V
Sbjct: 139 SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 198
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ L +V L K+ ++ SLL + I+ D + +TII+ C+++ + A
Sbjct: 199 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 258
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
L F + Y +LI L + + ++ +M + + V + LI
Sbjct: 259 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 318
Query: 405 LGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+ V A K++ S+ P+ TY++LI + D+A +++ M K
Sbjct: 319 FVKEGKLVEAEKLYDEMIKRSIDPD----IFTYSSLINGFCMHDRLDEAKHMFELMISKD 374
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
P++ T+N L+ G K RV + E++R+
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFRE 404
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 36/174 (20%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L + +EKA + F ++ +S+ D +TY M++ +A ++ +F + KG+
Sbjct: 459 LCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ + YT+++ G LKE EA ++
Sbjct: 518 NVIIYTTMISGFCRKG-------------LKE----------------------EADALF 542
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+EM + G PN TY L+ +R G + E+ +M+ G D + +++I
Sbjct: 543 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 596
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ ELM +G D V+Y +++ L G+VD A
Sbjct: 116 GCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVA 175
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ ++K K C P ++SY + L + KEA ++ EMI +GL P+ TYT +
Sbjct: 176 IDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASG 235
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L R K EEA+ F K+Q+ G++P N ++ CK ET I + YM N
Sbjct: 236 LCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPN 295
Query: 241 ---YPVFKEALQTFKVADENDSLLWQV 264
Y + E L + E LL Q+
Sbjct: 296 ESTYTILVEGLAYEGLVKEARDLLGQL 322
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 68/127 (53%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M++KG D +TY V++ + G VD A+ E + P VSY +K LF +R
Sbjct: 7 MRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAER 66
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
++A + +EM +G PPN T+ +L+ +L R G E A+E+ ++ + G P+ + N
Sbjct: 67 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNP 126
Query: 212 LIEKCCK 218
L+ CK
Sbjct: 127 LLHAFCK 133
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D TY +L+ + R+ E + G + V+Y V+ L A
Sbjct: 8 RDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERW 67
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + EEM K C P +V++ + L V+ A +V +++ + G PN +Y L
Sbjct: 68 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPL 127
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ + K ++A+ M G PD + N L+ C+ GE I +L +K
Sbjct: 128 LHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLK 183
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 18 DSAQDLLKNLP---IKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
+ A ++L+ +P +S + N +L M+KA F + SRG D +Y T
Sbjct: 103 EPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMV-SRGCYPDIVSYNT 161
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + + ++ KG + ++Y +V+ L+ AG A+ + +EM K
Sbjct: 162 LLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKG 221
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P I++YT L D+++EA + ++ G+ P Y ++ L + + A+
Sbjct: 222 LQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAI 281
Query: 192 EIFSKMQEAGVQPDKAACNILIE 214
++FS M G P+++ IL+E
Sbjct: 282 DLFSYMISNGCMPNESTYTILVE 304
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + +Y +L A+R + + E M KG + VT+ ++ +L G V+
Sbjct: 44 SYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVE 103
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + E++ C P +SY + ++ +A + M+ RG P+ +Y L+
Sbjct: 104 PAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLL 163
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L R G+ + A+++ +++ G P + N +I+ KAG+T+ + +L M
Sbjct: 164 TALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM 217
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + +Y T++D +A + + + M KG+ D +TYT++ L +
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ + +++ PT+V Y A + L A D++ MI G PN TYT+L
Sbjct: 243 EEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTIL 302
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGV 202
+E L G +EA ++ ++ GV
Sbjct: 303 VEGLAYEGLVKEARDLLGQLCSRGV 327
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 209/480 (43%), Gaps = 29/480 (6%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
+K ++ ++ ++K + ++K++ ++++ G D ++TM++ F + R +
Sbjct: 221 LKTCTFLLSSLVKANE-LKKSYEVYDFICLG-GIIPDVHLFSTMINAFCKGHREDDAIGL 278
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F M++ G+ + VTY +++H L +G +D A E+M ++ P++++Y+ ++ L
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+++ EA V KEM + G PN Y L++ + G EAL+I M G+ P+
Sbjct: 339 LEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398
Query: 209 CNILIEKCCKA---GETRTII--LILRYMKENR---------LALRYPVFKEALQ----- 249
N LI+ CK+ G+ ++ +I R + N+ L L++ F AL
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFR-FVTALHFIREM 457
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVE----FVTTDIEGPLSIDQGLVLILLKKKN 305
+ ND LL + +AVE + + L+ L K N
Sbjct: 458 LLRNLRPNDGLLTTLVSGLCKAG-KQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGN 516
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+ LL ++++ + D +T+I C + E VK + + +
Sbjct: 517 MQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNL 576
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
L+ L + + + + E K G+ VY ++I A + + + L
Sbjct: 577 LLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKK 636
Query: 425 -QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ + Y +LI Y G+ + A ++ M +G+ S T++ L+ GL +G V DA+
Sbjct: 637 LELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAK 696
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 193/472 (40%), Gaps = 65/472 (13%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + + T +++ F ++ +I + V E M +G+ I+ +++ V++WL
Sbjct: 389 SKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFV 448
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A++ EM L+ P T + L + EA +++ ++ +G PN T L+
Sbjct: 449 TALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALI 508
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L +AG +E L++ M E G+ D+ N LI CCK G+ + + M + +
Sbjct: 509 HGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQ 568
Query: 239 LRYPVFKEALQTFKVADEND--SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
F L AD+ D S LW N V V T G+
Sbjct: 569 PDIYTFNLLLHGLCNADKIDEASRLWHE--------CKKNGYVPNVYT---------YGV 611
Query: 297 VLILLKKKNLV-AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
++ K N V ++LL+ ++ K ++L+S V +++I C + + A +
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ L Y +L+ L + +++EM K G
Sbjct: 672 VLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEG------------------------- 706
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
LLP YT +IG Y G +K + + M IHP+ T+ +++ G K
Sbjct: 707 ----LLPN----VVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCK 758
Query: 476 LGRVSDAEIYRKE--KKSIQADALSKDAVP--------MEE--KICDLLYGG 515
LG+ +A E +K I DA++ +A +EE K+CD + G
Sbjct: 759 LGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSG 810
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 83 SSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+M F L M+ +G+ + TY+S+MH L N G VD A ++ +EM+ + P +V Y
Sbjct: 655 GNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCY 714
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
T + ++ + V +EM + PN +TYT++++ + GK +EA ++ ++M E
Sbjct: 715 TTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTE 774
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G+ PD N CK G+ + M + L
Sbjct: 775 KGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCL 814
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G+ + +TY M+D + +A ++ + + + K + +++V Y S++ G++
Sbjct: 598 KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + ++MK + + +Y++ M L V +A + EM + GL PN YT +
Sbjct: 658 NAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTI 717
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + G+ + + +M + P+K I+I+ CK G+T+ +L M E +
Sbjct: 718 IGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGI 777
Query: 238 ---ALRYPVFKEAL-------QTFKVADENDS 259
A+ Y F L + FKV DE S
Sbjct: 778 LPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSS 809
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 75/159 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG TY++++ + K++ + M+++G+ + V YT+++ S G +
Sbjct: 668 KSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQM 727
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + +EM +P +YT + + KEA + EM ++G+ P+ TY
Sbjct: 728 NKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAF 787
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
L + GK EEA ++ +M V D+ LI+ C
Sbjct: 788 TNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGC 826
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 163/388 (42%), Gaps = 34/388 (8%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ + K +P++ + T + L + +K++ +VY + G+ P+ + ++ ++
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
+ + ++A+ +FSKM++ GV P+ N +I CK+G M + +++
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324
Query: 239 --LRYPVFKEALQTFKVADENDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y VF L + DE + +L ++ F P + N T I+G
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYN-------TLIDG------- 370
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K N+ + ++ K I +S ++++I+ C + A E +
Sbjct: 371 ----YCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG 426
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L + + ++ +I L F + EM L L+ L A + A
Sbjct: 427 LPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAV 486
Query: 416 KIFSLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
+++ L P T ALI AG+ + LK+ + M +G+ T+N L
Sbjct: 487 ELWCRLLGKGFVPN----IVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTL 542
Query: 470 LAGLEKLGRVSDAEIYRKE--KKSIQAD 495
++G K G+V + ++E KK IQ D
Sbjct: 543 ISGCCKEGKVKEGFELKEEMVKKGIQPD 570
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 159/398 (39%), Gaps = 18/398 (4%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF L+ +KG+ T T ++ L A ++ + +++ + L P + ++ +
Sbjct: 208 VFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFC 267
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
R +A ++ +M + G+ PN TY ++ L ++G+ +EA KM + V P
Sbjct: 268 KGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLI 327
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHP 266
++ I K + +L+ M E V+ + + K+ + +++L ++
Sbjct: 328 TYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL--KIRD 385
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ IS N VT + S+ QG K + +++L ++ + + ++
Sbjct: 386 DMLSKGISPNS----VTLN-----SLIQGFC----KSDQIGQAENVLEEMIGRGLPINQG 432
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
S +I C R AL + +L L+ L K + E+ +
Sbjct: 433 SFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRL 492
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSA 444
G + LIH L A K+ + E TY LI G
Sbjct: 493 LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKV 552
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ ++ + M +KGI P + TFN+LL GL ++ +A
Sbjct: 553 KEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA 590
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 173/431 (40%), Gaps = 50/431 (11%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TYTT++D F +A ++ + + ++M KG AVTY S++H ++
Sbjct: 207 KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINE 266
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M+ + C P + +T+ + R +EA V EM RG P+ YT L++
Sbjct: 267 AKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLID 326
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L G+ EA +F M E G PD +I+ K G IL M ++ +
Sbjct: 327 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP 386
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + + V E + V+ + I N AV F L+
Sbjct: 387 DCFAYNSLMDGY-VKLERVDQAFGVYDRMVASGIKPN-AVTFNV------------LMHG 432
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR--RRDGALLAFEYSVKMDLN 357
L K SL +++K ++ ++S I ++ + R A L F+ + +
Sbjct: 433 LFKDGKTDRAFSLFKEMLEKE-EVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGII 491
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
E Y +LI L K P+ ++VE+M K G +
Sbjct: 492 PECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN------------------------- 526
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
P+ Q Y+ALI + D A +++ M ++G P+ T+ VL G G
Sbjct: 527 ----PDVQ----AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578
Query: 478 RVSDAEIYRKE 488
R D E ++
Sbjct: 579 RALDLEAVKQH 589
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 2/169 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A +++S G D F Y +++D + + +R+ V++ M GI +AVT+
Sbjct: 369 VEAAGEILELMAKS-GVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFN 427
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+MH L G D A ++++EM KE PT+VSYT + L RV EA ++EMI
Sbjct: 428 VLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMID 487
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
RG+ P C+TYT L+ L +AG+ EA ++ M + GV PD A + LI
Sbjct: 488 RGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 536
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 187/433 (43%), Gaps = 26/433 (6%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D F YT+++ + +A + + F + K ++D ++YT+V+ L+++ +D A
Sbjct: 72 FRPDVFLYTSVIHGYCKAGDLDTG--YFRAVTPKA-SLDVISYTTVIKGLADSKRIDEAC 128
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
++EE+K C P +V+YTA + L R+++ ++EM P TYTV+++ L
Sbjct: 129 ELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGL 188
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KCCKAGETRTIILILRYMKENRLA 238
+A +A ++F +M + G PD LI+ K K E R ++ ++ A
Sbjct: 189 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 248
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ Y + +E ++ Q+ + E L I L+
Sbjct: 249 VTYGSIVHGFCKLDMINEAKEVIAQMRER-----------------GCEPGLFIFTSLLS 291
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L K +L+ + + D + +++I++ R A F+ ++
Sbjct: 292 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 351
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ Y +I K+ EI+E M K+G + L+ R A ++
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVY 411
Query: 419 S-LLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRK-GIHPSLGTFNVLLAGLEK 475
++ K A T+ L+ F G D+A ++K M K + P+L ++ +L+ GL K
Sbjct: 412 DRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGK 471
Query: 476 LGRVSDAEIYRKE 488
GRVS+A + +E
Sbjct: 472 AGRVSEAFLQFQE 484
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D YT+++D+ R+ ++VF+ M EKG DA+TY +++ S G+V+
Sbjct: 311 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A I E M P +Y + M +RV +A VY M+ G+ PN T+ VLM
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430
Query: 179 EYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L + GK + A +F +M E V P + ILI+ KAG L + M
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEM 485
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG F +T++L + R V M +G D + YTS++ L + G V
Sbjct: 275 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 334
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A ++++ M K C P ++Y ++ V+ A ++ + M + G+ P+C+ Y L
Sbjct: 335 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSL 394
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
M+ V+ + ++A ++ +M +G++P+ N+L+ K G+T + + M E
Sbjct: 395 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 451
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 150/382 (39%), Gaps = 43/382 (11%)
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C PTIVSY + L D++ EA + MI G P+ +T L+ +AG+ +
Sbjct: 3 CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGH 62
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
++ ++ + +PD +I CKAG+ T K + + Y + L
Sbjct: 63 KLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121
Query: 252 KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLS---IDQGL---------VL 298
K DE L ++ SP ++ T I+G L I+ GL
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVA-------YTAVIDGLLKAGRIEDGLKNFEEMSGSSC 174
Query: 299 ILLKKKNLVAIDSLLSGIM------------DKSIQLDSAVISTIIEVNCDHRRRDGALL 346
+ + V ID L M K D+ +T+I+ + D A
Sbjct: 175 VPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARK 234
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL-GALLIHRL 405
+ + Y +++ KL+ + E++ +M + G G+++ +LL + L
Sbjct: 235 LLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL 294
Query: 406 GSARRPVPAAKIFSLLPE--DQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIH 460
R A + + +L E + C YT+LI + FS G +A ++ +M KG
Sbjct: 295 SKGR----AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 350
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P T+ ++ K+G V A
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAA 372
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 120/324 (37%), Gaps = 63/324 (19%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P +Y ++ L K +EA + F+ M + G +PD A LI CKAG+ +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV- 60
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
LL Q +F P+ V T+
Sbjct: 61 -------------------------------GHKLLNQALKRFRPD-------VFLYTSV 82
Query: 286 IEG---PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
I G +D G + K + LD +T+I+ D +R D
Sbjct: 83 IHGYCKAGDLDTGYFRAVTPKAS-----------------LDVISYTTVIKGLADSKRID 125
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A FE + AY A+I L+K + EEM+ + ++I
Sbjct: 126 EACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVI 185
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L A+ A K+F + + + C T TYT LI + A D+A K+ M KG
Sbjct: 186 DGLCKAQMLPDACKVFEQMVQ-KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 244
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAE 483
P+ T+ ++ G KL +++A+
Sbjct: 245 EPTAVTYGSIVHGFCKLDMINEAK 268
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 195/483 (40%), Gaps = 91/483 (18%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D FT M+ + R+ + F +E+G+ +DA Y+ ++ + + +
Sbjct: 214 RGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNL 273
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + EEMK + P+ ++T+ + + EA + +EMI G P N T LM+
Sbjct: 274 GLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMK 333
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN---- 235
G + AL +F+K+ E G+ P+K ++LIE CC +G + MK N
Sbjct: 334 GYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPP 393
Query: 236 ---------RLALRYPVFKEALQTFKVA------------------------DENDSLLW 262
R L+ P+++EA + F A DE SLL
Sbjct: 394 SVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLD 453
Query: 263 Q-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V+ P +S ND ++L +K N+ S+ S ++ + +
Sbjct: 454 NMVNQGMVPNVVSYND------------------MILGHCRKGNMDMASSVFSDMLARDL 495
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
+ + S +I+ N + AL F+ + +++ + +I L K
Sbjct: 496 KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCK--------- 546
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSA 441
V +M++A L +L I P+ TY +++ +
Sbjct: 547 -VGQMSEARDKLKNFLEEGFI----------PSC-------------MTYNSIVDGFIKE 582
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALSK 499
G+ D AL +Y+ MC G+ P++ T+ L+ G K R+ A R E +K ++ D +
Sbjct: 583 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 642
Query: 500 DAV 502
A+
Sbjct: 643 SAL 645
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 184/439 (41%), Gaps = 72/439 (16%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +M WL G +D A ++ + M + P +VSY + + A+ V+ +M
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ R L PN TY++L++ + G E+AL++F +M + P N +I CK G+
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ- 549
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE-F 281
M E R + L+ F + F P ++ N V+ F
Sbjct: 550 ---------MSEAR---------DKLKNF------------LEEGFIPSCMTYNSIVDGF 579
Query: 282 VTT-DIEGPLSIDQGLVLILLKKKNLVAIDSLLSG----------------IMDKSIQLD 324
+ +I+ L++ + + + N+V SL++G + +K ++LD
Sbjct: 580 IKEGNIDSALAVYREMCEFGVSP-NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 638
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S +I+ C R + A F +++ L+ R Y ++I LN +
Sbjct: 639 VTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYK 698
Query: 385 EMT--KAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIG 436
+M + LG Y LI L R V A+ ++ ++P+ T+ L+
Sbjct: 699 KMINDRIPCDLGTY--TTLIDGLLKEGRLVFASDLYMEMLSKGIVPD----IITFHVLVN 752
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADA 496
+ G + A KI + M RK + PS+ +N L+AG + G + KE ++ +
Sbjct: 753 GLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNL-------KEAFTLHDEM 805
Query: 497 LSKDAVPMEEKICDLLYGG 515
L + VP ++ D+L G
Sbjct: 806 LDRGLVP-DDVTYDILING 823
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/408 (17%), Positives = 169/408 (41%), Gaps = 16/408 (3%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+ + ++ + + M +G+ + V+Y ++ G++D A +++ +
Sbjct: 430 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 489
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M ++ P +V+Y+ + F ++A D++ +M+ + P +T+ ++ L + G+
Sbjct: 490 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 549
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EA + E G P N +++ K G + + + R M E ++ +
Sbjct: 550 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 609
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ F ++ D L E +E ++ L+ K++++
Sbjct: 610 LINGFCKSNRIDLALKTRD--------------EMREKGLELDVTAYSALIDGFCKRRDM 655
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+ L +++ + + V +++I D + AL+ ++ + + + Y L
Sbjct: 656 ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTL 715
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I L+K +++ EM G + +L++ L + + A KI +
Sbjct: 716 IDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNM 775
Query: 427 CTAT--YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ Y LI YF G+ +A ++ M +G+ P T+++L+ G
Sbjct: 776 TPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 87/178 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + TYT++++ F ++ RI + M+EKG+ +D Y++++ D++ A
Sbjct: 599 GVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESA 658
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ E+ P + Y + + + ++ A YK+MI +P + TYT L++
Sbjct: 659 QDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDG 718
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L++ G+ A +++ +M G+ PD ++L+ C G+ IL M +
Sbjct: 719 LLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 776
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 184/484 (38%), Gaps = 88/484 (18%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIF-------GEAKRI-----------SSMKYV 88
+ A +F RGF Y +L I G A+++ S + +V
Sbjct: 75 QSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDPSPVVFV 134
Query: 89 FELM---QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
L+ + +D + +++ A ++ A++ + M ++ P + +
Sbjct: 135 DHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTA 194
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + + E D+Y +M+ RG+ + +T V++ ++ G+ EEA E F + +E GV+ D
Sbjct: 195 LVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLD 254
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
A +I+I+ CK + + +L MKE R V EA T +
Sbjct: 255 AGAYSIIIQAVCKKPNSNLGLELLEEMKE-----RGWVPSEATFTSVIV----------- 298
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
++ + VE + E I+ G K NLV SL+ G
Sbjct: 299 -----ACVAQGNMVEALRLKEE---MINCG------KPMNLVVATSLMKGY--------- 335
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
C D AL F + L + Y LI K +E+ +
Sbjct: 336 ----------CAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQ 385
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPV--PAAKIFSLLPEDQKCTA----TYTALIGVYF 439
M G V+ L+ G + P+ A+K+F E C TY ++
Sbjct: 386 MKLNGIPPSVFNVNSLLR--GYLKAPLWEEASKLFD---EAVDCGVANIFTYNIMMSWLC 440
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSK 499
G D+A + M +G+ P++ ++N ++ G + G + A S+ +D L++
Sbjct: 441 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA-------SSVFSDMLAR 493
Query: 500 DAVP 503
D P
Sbjct: 494 DLKP 497
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A +++ + R D TYTT++D + R+ ++ M KGI D +T+
Sbjct: 690 MEAALVWYKKMINDR-IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFH 748
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L N G ++ A I EEM K P+++ Y + F +KEA ++ EM+ R
Sbjct: 749 VLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDR 808
Query: 166 GLPPNCYTYTVLM 178
GL P+ TY +L+
Sbjct: 809 GLVPDDVTYDILI 821
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 46 MEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
ME A LFF + G + +R Y +M+ F + + + ++ M I D TY
Sbjct: 655 MESAQDLFFELLEV--GLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTY 712
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
T+++ L G + A +++ EM K P I+++ + L +++ A + +EM +
Sbjct: 713 TTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDR 772
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+ + P+ Y L+ R G +EA + +M + G+ PD +ILI
Sbjct: 773 KNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 821
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 176/400 (44%), Gaps = 32/400 (8%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
Y +++ AG +D A+N ++K + P I ++ M L N +V A +YK++
Sbjct: 167 YDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLK 226
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
GL PN YTY+++++ R G EA +F +M+ GV P+ A IE C +
Sbjct: 227 SLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSD 286
Query: 224 TIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVE 280
+L+ KE + + + ++ F D + +L + Q E ISD
Sbjct: 287 FGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQ---ELISDARCY- 342
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
L+ K +L +L + + K I+ + ++STI++ C+
Sbjct: 343 -------------SELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGM 389
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
+ F+ + + L+ +Y ++ L KL + +++EM + +
Sbjct: 390 HSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTT 449
Query: 401 LIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
LI+ + V A ++F L P+ T+ L+ + G A++ALK+Y+ M
Sbjct: 450 LINGYCHVGKLVDAFRVFEEMEGKGLEPD----VVTFNILLAAFSRRGLANEALKLYEYM 505
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY--RKEKKSI 492
+ + P+ T NV++ GL G+V++AE + E KSI
Sbjct: 506 KSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSI 545
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 178/442 (40%), Gaps = 47/442 (10%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + +T+L F E S + F+ ++ I +D V+Y V+ L VD
Sbjct: 367 SKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVD 426
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV + +EMK K+ I+ YT + ++ +A V++EM +GL P+ T+ +L+
Sbjct: 427 QAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILL 486
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
R G EAL+++ M+ ++P+ N++IE C G+ M++ +
Sbjct: 487 AAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSID 546
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y K ++ L +++ E L +D+G +
Sbjct: 547 -NYGAMITGYCEAKHTEKASELFFELS---------------------ERGLLMDRGYIY 584
Query: 299 ILLKK--------KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
LL+K + L + ++L M+ S + VI+ D R + F+
Sbjct: 585 KLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAG-DMRNAEAV---FDI 640
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-----HSLGVYLGALL--IH 403
K L + Y +I + + N + + ++M G + V L L +H
Sbjct: 641 LRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVH 700
Query: 404 RLGSARR----PVPAAKIFSLL--PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
AR+ + A+ I+ + E + YTALI + + A+ +Y M +
Sbjct: 701 SEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYR 760
Query: 458 GIHPSLGTFNVLLAGLEKLGRV 479
G+ P T LL+G G V
Sbjct: 761 GVEPDRATCTALLSGCRNRGDV 782
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 25/181 (13%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M A F+ + R G D FTYTTM+++ R+S + +F+ M+ +GI D VT+T
Sbjct: 631 MRNAEAVFD-ILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFT 689
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ DG LK + ++ K + L A++++KEM
Sbjct: 690 VLL---------DG--------HLKRVHSE--AFARKRKEVNL-----AASNIWKEMQNT 725
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ P+ YT L++ + + E+A+ ++ +M GV+PD+A C L+ C G+ +
Sbjct: 726 EIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSGCRNRGDVDMV 785
Query: 226 I 226
+
Sbjct: 786 L 786
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG--FNHDRFTYTTMLDIFGEAKR 81
K+L I D + N V+ +EK + +G + D YTT+++ + +
Sbjct: 400 FKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGK 459
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
+ VFE M+ KG+ D VT+ ++ S G + A+ ++E MK ++ P +++
Sbjct: 460 LVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNV 519
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
++ L + +V EA + M + + Y ++ A E+A E+F ++ E G
Sbjct: 520 MIEGLCIGGKVTEAEAFFCNMEDKSID----NYGAMITGYCEAKHTEKASELFFELSERG 575
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ D+ L+EK C+ GE + +L+ M
Sbjct: 576 LLMDRGYIYKLLEKLCEEGEKDRALWLLKTM 606
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/440 (19%), Positives = 168/440 (38%), Gaps = 49/440 (11%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y+ ++ + +A +S + M+ KGI + V ++++ + G V +
Sbjct: 338 DARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEF 397
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ K + VSY + L ++V +A + EM + + + YT L+
Sbjct: 398 KRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHV 457
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
GK +A +F +M+ G++PD NIL+ + G + + YMK L A+ +
Sbjct: 458 GKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITH 517
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ--GLVLI 299
V E L E ++ + + SID ++
Sbjct: 518 NVMIEGLCIGGKVTEAEAFFCNMEDK-----------------------SIDNYGAMITG 554
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ K+ L + ++ + +D I ++E C+ +D AL + + +++
Sbjct: 555 YCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPS 614
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH------RLGSARRPVP 413
+ Y +I + + + + K+G + ++ +I+ RL AR
Sbjct: 615 KDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQ 674
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYF----SAGSADK-------ALKIYKTMCRKGIHPS 462
K + P+ T+T L+ + S A K A I+K M I P
Sbjct: 675 DMKHRGIKPD----LVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQNTEIRPD 730
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
+ + L+ G K+ R+ DA
Sbjct: 731 VICYTALIDGHCKVDRLEDA 750
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 9/200 (4%)
Query: 24 LKNLPIKWDSYTVNQVLK----THPPMEKAWLFFNWVSRSRGF-----NHDRFTYTTMLD 74
L N +K Y +Q LK TH M + V+ + F + Y M+
Sbjct: 494 LANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSIDNYGAMIT 553
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ EAK +F + E+G+ +D ++ L G+ D A+ + + M P
Sbjct: 554 GYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEP 613
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+ Y + + ++ A V+ + + GL P+ +TYT ++ R + EA +F
Sbjct: 614 SKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLF 673
Query: 195 SKMQEAGVQPDKAACNILIE 214
M+ G++PD +L++
Sbjct: 674 QDMKHRGIKPDLVTFTVLLD 693
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 196/454 (43%), Gaps = 30/454 (6%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK-YVFEL-M 92
TV Q L KA FFNW ++ G+ H +Y +ML+I G + +++ + ++F +
Sbjct: 81 TVLQTLGFLRDTSKALQFFNW-AQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 93 QEKGI-NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ +GI ++A + S+M + AG ++ ++ MK P++V++ + + IL R
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGR 199
Query: 152 VKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
A VY EM+ G+ P+ +T+ +L+ G ++ IF+ + G +PD N
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPV--FKEALQTFKVADENDSLLWQVHPQF 268
L++ C+AG+ +++ M + + L V + ++ + E + L
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMV 319
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM-DKSIQLDSAV 327
+ ++N T I+G L + + I +L G D + D+
Sbjct: 320 NQGLKANNIT---YNTLIKG-----------LCEARKFEKIKDILEGTAGDGTFSPDTCT 365
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T++ +C D AL FE ++ + + Y AL+ L + + K ++++++
Sbjct: 366 FNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLL 425
Query: 388 K-----AGHSLGVYLGAL--LIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTALIGVYF 439
+ +G + A + L + A K F L+ + +Y LI +
Sbjct: 426 ERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHC 485
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
G+ + ++ M RK P T+ L+ GL
Sbjct: 486 KEGTFESGYELLVLMLRKDFLPDFETYESLINGL 519
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/456 (20%), Positives = 179/456 (39%), Gaps = 48/456 (10%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S N + TYTT++ + + I VFE M +G+ + +TY +++ L A
Sbjct: 284 KSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKF 343
Query: 118 DGAVNIWEEMKLKECY-PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ +I E + P ++ M + +A V++ M + + P+ TY+
Sbjct: 344 EKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSA 403
Query: 177 LMEYLVRAGKYEEALEIFSKMQEA-------GVQPDKAACNILIEKCCKAGETRTIILIL 229
L+ L + G YE+A ++ K+ E G +P AA N + + C+ G+T+
Sbjct: 404 LVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAF 463
Query: 230 RYMKENRLALRYPVFKEALQ------TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
R + R P +K + TF+ E L+ + F P+F E
Sbjct: 464 RQLMR-RGTQDPPSYKTLIMGHCKEGTFESGYE--LLVLMLRKDFLPDF-------ETYE 513
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ I G L +D K L+A+ S L ++ S + +S+ +I+ + R
Sbjct: 514 SLINGLLHMD----------KPLLALQS-LEKMLRSSHRPNSSTFHSILAKLLEQGRTSE 562
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
+ + + ++ + + +L K ++V + G+S+ + LI
Sbjct: 563 SASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKM---EELIR 619
Query: 404 RLGSARRPVPAAKIFSLLPEDQK------CTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L R+ + +K+ E + C L + +A +Y +
Sbjct: 620 YLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEI----NKLSEAFSLYYKLVEM 675
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
G+H L N L LE ++ +AE K + ++
Sbjct: 676 GVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEPVE 711
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 181/452 (40%), Gaps = 57/452 (12%)
Query: 37 NQVLKTHPPMEKAWLFFNWVSRSRGF--NHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
N++L M K L + R + ++D ++Y +++ F ++ V M +
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G D VT +S+++ + + AV + ++M + E P V++ + LFL+++ E
Sbjct: 144 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A + M+ RG P+ +TY ++ L + G + AL + KM++ ++ D +I+
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSP 270
C + + M + + ++ + +D + L + + +P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ V F L+ +K+ LV + L ++ +SI D S+
Sbjct: 324 ------NVVTF------------SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I C H R D A FE + D Y LI K + E+ EM++ G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+G+ T TY LI F AG D A KI
Sbjct: 426 -------------LVGN--------------------TVTYNTLIQGLFQAGDCDMAQKI 452
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+K M G+ P + T+++LL GL K G++ A
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 9/219 (4%)
Query: 11 ILKYSTWDSAQDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ + S ++ +K +E L+ + RS +
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS--ID 357
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY+++++ F R+ K++FELM K + VTY +++ A V+ + +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+Y ++ LF A ++K+M+ G+PP+ TY++L++ L +
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
GK E+AL +F +Q++ ++PD NI+IE CKAG+
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 103/178 (57%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N + T++ ++D F + ++ + +++ M ++ I+ D TY+S+++ +D
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++E M K+C+P +V+Y +K RV+E ++++EM QRGL N TY L++
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L +AG + A +IF KM GV PD +IL++ CK G+ +++ Y++++++
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 91/168 (54%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++ F +AKR+ +F M ++G+ + VTY +++ L AGD D A I+++M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P I++Y+ + L ++++A V++ + + + P+ YTY +++E + +AGK
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
E+ ++F + GV+P+ +I C+ G + R MKE+
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+ F +S+ RG + TY T++ +A + +F+ M G+ D +TY+
Sbjct: 411 VEEGMELFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G ++ A+ ++E ++ + P I +Y ++ + +V++ D++ + +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI------------ 213
G+ PN YT ++ R G EEA +F +M+E G P+ N LI
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 214 -------EKCCKAGETRTIILILRYMKENRLALRY 241
C G+ TI +++ + + RL Y
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/525 (18%), Positives = 205/525 (39%), Gaps = 54/525 (10%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ K+ S + ++NL I +D Y+ N ++ + L + + G+
Sbjct: 87 LSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY 146
Query: 63 NHDRFTYTTMLDIFGEAKRISS----------MKY------------------------- 87
D T +++L+ + KRIS M+Y
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ + M +G D TY +V++ L GD+D A+++ ++M+ + +V YT + L
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
V +A +++ EM +G+ PN TY L+ L G++ +A + S M E + P+
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+ LI+ K G+ + M + + + + F + D D
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
S + + + +++G+ L + G++ ++ ++ +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR---------GLVGNTVTYNTLI 437
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+CD ++ F+ V + + Y L+ L K K + E +
Sbjct: 438 QGLFQAGDCDMAQK-----IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
K+ +Y ++I + A + +F L + YT +I + G +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLL-AGLEKLGRVSDAEIYRKEK 489
+A +++ M G P+ GT+N L+ A L + + AE+ ++ +
Sbjct: 553 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 162/390 (41%), Gaps = 35/390 (8%)
Query: 129 LKECYPTIVSYTAYMKI---LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
L+ Y + SY K+ + L+ ++ +A D++ EM+Q P+ + L+ + +
Sbjct: 35 LRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMN 94
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE----------N 235
K++ + + +MQ + D + NILI C+ + + +L M + +
Sbjct: 95 KFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLS 154
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQ---------VHPQFSPEFISDNDAV--EFVTT 284
L Y K + + D+ + +Q +H F S+ A+ V
Sbjct: 155 SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ L +V L K+ ++ SLL + I+ D + +TII+ C+++ + A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
L F + Y +LI L + + ++ +M + + V + LI
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 405 LGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+ V A K++ S+ P+ TY++LI + D+A +++ M K
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPD----IFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
P++ T+N L+ G K RV + E++R+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 36/174 (20%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L + +EKA + F ++ +S+ D +TY M++ +A ++ +F + KG+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ + YT+++ G LKE EA ++
Sbjct: 534 NVIIYTTMISGFCRKG-------------LKE----------------------EADALF 558
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+EM + G PN TY L+ +R G + E+ +M+ G D + +++I
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 182/451 (40%), Gaps = 66/451 (14%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V K M++A LF N + T M+D +AK++ +FE M K
Sbjct: 423 VEAAFKVRDAMKEAGLFPNVM-----------TVNIMIDRLCKAKKLDEACSIFEGMNHK 471
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
+ D VT+ S++ L G VD A ++E+M + P V YT+ +K F R ++
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
++KEMI RG P+ M+ + +AG+ + +F +++ G PD + +ILI
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHG 591
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFIS 274
KAG R + MKE L + + F K N + +Q+
Sbjct: 592 LVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKA--YQL---------- 639
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
+E + T P + G V+ L ID
Sbjct: 640 ----LEEMKTKGRQPTVVTYGSVI-----DGLAKID------------------------ 666
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
R D A + FE + L L Y +LI K+ + I+EE+ + G +
Sbjct: 667 -----RLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 721
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIY 451
VY L+ L A A F + ++ K T TY+ LI +KA +
Sbjct: 722 VYTWNCLLDALVKAEEINEALVCFQNM-KNLKGTPNHITYSILINGLCRVRKFNKAFVFW 780
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ M ++G+ P+ T+ ++AGL K G +++A
Sbjct: 781 QEMQKQGLKPNTITYTTMIAGLAKAGNIAEA 811
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 202/478 (42%), Gaps = 37/478 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW FF+ + +S G D TYT+M+ + + R+ +FE M++ A Y
Sbjct: 284 VDMAWKFFHEI-KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYN 342
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +AG D A ++ E K + C P++++Y + L R+ EA ++EM ++
Sbjct: 343 TMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KK 401
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE----------- 214
PN TY VL++ L +AG+ E A ++ M+EAG+ P+ NI+I+
Sbjct: 402 DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEA 461
Query: 215 ---------KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ-- 263
K C E LI K+ R+ Y ++++ L + K+ + ++++
Sbjct: 462 CSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPN---AVVYTSL 518
Query: 264 VHPQFSPEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
+ F D + E + L + + + K +L I +
Sbjct: 519 IKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGF 578
Query: 322 QLDSAVISTIIE--VNCDHRRRDGALLAFEYSVK-MDLNLERTAYLALIGILIKLNTFPK 378
D S +I V R L Y++K L+ AY I K K
Sbjct: 579 IPDVMSYSILIHGLVKAGFARETYELF---YAMKEQGCVLDTHAYNTFIDGFCKSGKVNK 635
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIG 436
+++EEM G V +I L R A +F + + Y++LI
Sbjct: 636 AYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLID 695
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
+ G D+A I + + +KG+ P++ T+N LL L K +++A + + K+++
Sbjct: 696 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKG 753
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 186/441 (42%), Gaps = 27/441 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S + D Y +D FG+A ++ F ++ G+ D VTYTS++ L +
Sbjct: 260 KSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRL 319
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV I+E+M+ P +Y + + EA + + RG P+ Y +
Sbjct: 320 DEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCI 379
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L + G+ EAL F +M++ P+ + N+LI+ CKAGE + MKE L
Sbjct: 380 LTCLGKKGRLGEALRTFEEMKKDAA-PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGL 438
Query: 238 ---ALRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ + + L K DE S+ + H SP D V F +
Sbjct: 439 FPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSP------DEVTFCS---------- 482
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L+ L K+ + L ++D ++ V +++I+ R++ F+ +
Sbjct: 483 --LIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIH 540
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ + A + + K K + EE+ G V ++LIH L A
Sbjct: 541 RGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARE 600
Query: 414 AAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
++F + E Q C T Y I + +G +KA ++ + M KG P++ T+ ++
Sbjct: 601 TYELFYAMKE-QGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVI 659
Query: 471 AGLEKLGRVSDAEIYRKEKKS 491
GL K+ R+ +A + +E KS
Sbjct: 660 DGLAKIDRLDEAYMLFEEAKS 680
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 144/342 (42%), Gaps = 25/342 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRGF D +Y+ ++ +A +F M+E+G +D Y + + +G V
Sbjct: 574 KSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKV 633
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + EEMK K PT+V+Y + + L DR+ EA +++E GL N Y+ L
Sbjct: 634 NKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSL 693
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ + G+ +EA I ++ + G+ P+ N L++ KA E ++ + MK +
Sbjct: 694 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKG 753
Query: 238 ALRYPVFKEALQTF-KVADENDSLL-WQVHPQ--FSPEFISDNDAVEFVTTDIEGPLSID 293
+ + + +V N + + WQ + P I+ TT I G
Sbjct: 754 TPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT-------YTTMIAG----- 801
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L K N+ SL DSA + IIE RR A FE +
Sbjct: 802 ------LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRM 855
Query: 354 MDLNLERTAYLALIGILIK---LNTFPKVAEIVEEMTKAGHS 392
N+ +AL+ L K L V ++ E+ K+ H+
Sbjct: 856 KGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKSQHA 897
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 150/426 (35%), Gaps = 52/426 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
YTT++ + M +F MQE G + +T+V+ + G +D A+++ +EM
Sbjct: 200 AYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEM 259
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + IV Y V ++ +AGK
Sbjct: 260 KSNCLHADIV-----------------------------------LYNVCIDCFGKAGKV 284
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ A + F +++ G+ PD +I CK + I M++NR +
Sbjct: 285 DMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTM 344
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ + A + D + Q + I A + T + + + L KK+
Sbjct: 345 IMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA 404
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
S + ++D ++ EV + RD A + M +N+ +I
Sbjct: 405 PNLSTYNVLID--------MLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNI-------MI 449
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L K + I E M S LI LG R A +++ + + K
Sbjct: 450 DRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKI 509
Query: 428 --TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
YT+LI +F G + KI+K M +G P L N + + K G
Sbjct: 510 PNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRAL 569
Query: 486 RKEKKS 491
+E KS
Sbjct: 570 FEEIKS 575
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 126/334 (37%), Gaps = 49/334 (14%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+ L P Y +L+ + + K++ +I +M AG P C LI C K+ + R
Sbjct: 124 QALCPEAYDSLLLV--MAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLRE 181
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
+++ M++ + + + + E+D +L H + + +V TT
Sbjct: 182 GFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQM---QELGYEVSVHLFTT 238
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
++ + ++ L A SLL + + D + + I+ + D A
Sbjct: 239 -----------VIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMA 287
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F L + Y ++IG+L K N + EI E+M +
Sbjct: 288 WKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQ---------------- 331
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
R VP C Y +I Y SAG D+A + + +G PS+
Sbjct: 332 ----NRNVP-------------CAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVI 374
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALS 498
+N +L L K GR+ +A +E K A LS
Sbjct: 375 AYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLS 408
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 144/368 (39%), Gaps = 34/368 (9%)
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+++++E D+ + M + P YT L+ L + + L +F +MQE G +
Sbjct: 176 SNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHL 235
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
+I + G + +L MK N L ++ + F A + D + W+ +
Sbjct: 236 FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVD-MAWKFFHEI 294
Query: 269 SPEFISDNDAVEFVTTDIEGPLS----IDQGLVLILLKKKN-----LVAIDSLL-----S 314
+ +D T + G L +D+ + + ++N A ++++ +
Sbjct: 295 KSHGLLPDDV---TYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSA 351
Query: 315 GIMDKSIQL-----DSAVISTIIEVNC------DHRRRDGALLAFEYSVKMDLNLERTAY 363
G D++ L I ++I NC R AL FE +K D + Y
Sbjct: 352 GKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFE-EMKKDAAPNLSTY 410
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI +L K ++ + M +AG V ++I RL A++ A IF +
Sbjct: 411 NVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM-N 469
Query: 424 DQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+ C+ T+ +LI G D A ++Y+ M P+ + L+ K GR
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKE 529
Query: 481 DAEIYRKE 488
D KE
Sbjct: 530 DGHKIFKE 537
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA++F+ + + +G + TYTTM+ +A I+ +FE + G D+ +Y ++
Sbjct: 775 KAFVFWQEMQK-QGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKEC 132
+ LS + A I+EE ++K C
Sbjct: 834 IEGLSYSRRAMEAYKIFEETRMKGC 858
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 207/483 (42%), Gaps = 38/483 (7%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
++++ K +Y T S + + + I D YT+N ++ + + + F+ +++ G
Sbjct: 74 LTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGL 133
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I ++F+ M +G + VTY ++++ L G+ + A+
Sbjct: 134 QPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR 193
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M+ C P +V YT+ + L + +V EA +++ +M+ +G+ P+ +TYT L+ L
Sbjct: 194 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 253
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII--LILRYMKENRL 237
+++ + ++M + + PD + +++ CK G E ++ +I+R ++ N +
Sbjct: 254 NLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVV 313
Query: 238 ALRYPVFKEALQT-----FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ LQ+ KV D VH ++P IS N T I G
Sbjct: 314 TYNALMDGHCLQSEMDEAVKVFDT------MVHNGYAPNVISYN-------TLING---- 356
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
K + + L + K + ++ +T++ C R A+ F V
Sbjct: 357 -------YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMV 409
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ Y L+ L K + + +++ + + + + ++I + A
Sbjct: 410 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 469
Query: 413 PAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A IFS L + TYT +I G D+A K++ M G P T+N +
Sbjct: 470 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 529
Query: 471 AGL 473
GL
Sbjct: 530 QGL 532
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 39/242 (16%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
++ + T N ++ H M++A F+ + + G+ + +Y T+++ + + +R+
Sbjct: 308 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN-GYAPNVISYNTLINGYCKIQRMDKA 366
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
Y+FE M +K + + VTY ++MH L + G + A+ ++ EM P + +Y +
Sbjct: 367 TYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 426
Query: 146 LFLNDRVKEAT-----------------------------------DVYKEMIQRGLPPN 170
L + EA D++ + +GL PN
Sbjct: 427 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 486
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TYT+++ L R G +EA ++F +M G PD N + + + E I +L+
Sbjct: 487 VRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 546
Query: 231 YM 232
M
Sbjct: 547 EM 548
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 128/335 (38%), Gaps = 51/335 (15%)
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+R A V ++++ GL P+ T+T L+ L GK +AL +F KM G QP+
Sbjct: 116 NRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTY 175
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL--WQVHPQ 267
LI CK G T I +LR M++ V+ + DSL QV
Sbjct: 176 GTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII---------DSLCKDRQVTEA 226
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
F N + V I + L+ L + +LL+ +++ I D +
Sbjct: 227 F-------NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVI 279
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
ST+++ C + A + + + Y AL+ + + ++ + M
Sbjct: 280 FSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV 339
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
G++ V +Y LI Y DKA
Sbjct: 340 HNGYAPNVI---------------------------------SYNTLINGYCKIQRMDKA 366
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+++ MC+K + P+ T+N L+ GL +GR+ DA
Sbjct: 367 TYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDA 401
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 146/383 (38%), Gaps = 56/383 (14%)
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
N +D A++ + M P+ V + + + + + +M G+PP+ Y
Sbjct: 44 NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY 103
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T +L+ + A + +K+ + G+QPD A LI C G+
Sbjct: 104 TLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK----------- 152
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+AL F D ++ + F P ++ T I G
Sbjct: 153 -----------IGDALHLF------DKMIGE---GFQPNVVT-------YGTLING---- 181
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L K N A LL + + Q D V ++II+ C R+ A F V
Sbjct: 182 -------LCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 234
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++ + Y +LI L L + V ++ +M + V + + ++ L +
Sbjct: 235 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 294
Query: 413 PAAKIFSLL--PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A + ++ + TY AL+ + D+A+K++ TM G P++ ++N L+
Sbjct: 295 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 354
Query: 471 AGLEKLGRVSDA-----EIYRKE 488
G K+ R+ A E+ +KE
Sbjct: 355 NGYCKIQRMDKATYLFEEMCQKE 377
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +LD + + + + ++ ++ D YT V+ + AG+++ A +I+
Sbjct: 416 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 475
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ K P + +YT + L + EA ++ EM G P+ TY + + L++
Sbjct: 476 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 535
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ A+++ +M G D + +L+E C
Sbjct: 536 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 7/258 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ +LM +G D V+Y +++ L +G+VD A
Sbjct: 202 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 261
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + ++K K C P ++SY + L + KEA ++ EM+ +GL P+ TY+ +
Sbjct: 262 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 321
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L R + E+A+ F K+Q+ G++P+ N +I CK ET + I + YM N
Sbjct: 322 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 381
Query: 241 ---YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE--FVTTDIEGPLSIDQG 295
Y + E L + E LL ++ + E + D ++ F+TT + P S G
Sbjct: 382 ESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLIDVAFLTTFL--PCSNANG 439
Query: 296 LVLILLKKKNLVAIDSLL 313
+ L + D+LL
Sbjct: 440 GPFLRLPPEGSPVYDALL 457
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 156/362 (43%), Gaps = 26/362 (7%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
D+A+ L+ +P++ D+YT N +++ A + + R R D TYT +L+
Sbjct: 17 DAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV-PDVVTYTILLE 75
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + + M++KG D VTY V++ + G VD A+ + + C P
Sbjct: 76 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 135
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
VSY +K L +R ++A ++ EM Q+G PPN T+ +L+ +L R G E ALE+
Sbjct: 136 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 195
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTF 251
++ + G P+ + N L+ CK + + L M + Y AL
Sbjct: 196 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 255
Query: 252 KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
D LL Q+ + +P IS N ++ +T K A++
Sbjct: 256 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK-----------------AGKTKEALE 298
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
LL+ ++ K +Q D STI C R + A+ AF M + Y A+I L
Sbjct: 299 -LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357
Query: 371 IK 372
K
Sbjct: 358 CK 359
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/388 (19%), Positives = 155/388 (39%), Gaps = 64/388 (16%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
+ Y +++ AG +D A + EM ++ P +Y ++ L R A V E
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M++R P+ TYT+L+E + Y++A+++ +M++ G PD N+++ C+ G
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 222 TRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
I L+ + + Y + + L T + ++ + L+ ++ + P
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP-------- 169
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCD 337
P + +++ L +K LV +L I +S + ++ C
Sbjct: 170 ----------PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCK 219
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
++ D A+ A + +++ +P + +T S V +
Sbjct: 220 QKKMDKAM-------------------AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 260
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTM 454
L+H+L +D+ C +Y +I AG +AL++ M
Sbjct: 261 AVELLHQL-----------------KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 303
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KG+ P + T++ + AGL + R+ DA
Sbjct: 304 VSKGLQPDIITYSTIAAGLCREDRIEDA 331
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G D TY+T+ RI F +Q+ GI + V Y +++ L +
Sbjct: 305 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 364
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
A++++ M C P +YT ++ L +KEA D+ E+ R
Sbjct: 365 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 411
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 186/438 (42%), Gaps = 26/438 (5%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+ + G D TYTT++D + K+I + E + G TY ++++ L G
Sbjct: 25 TTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGR 84
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ A+++ ++ C P +V+YT+ + L R EA ++KEM RGL + YT
Sbjct: 85 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTA 144
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ L++AGK +A ++ M G PD + +I+ CKAG + I + M+
Sbjct: 145 LIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG 204
Query: 237 LALRYPVFKEALQTFKVADENDS---LLWQVHPQF-SPEFISDNDAVEFVTTDIEGPLSI 292
LA V+ + A + D +L Q+ F +P+ I+ N + I
Sbjct: 205 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN-------------ILI 251
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
D L K ++ A + +++ + D + +I C D A F+
Sbjct: 252 DG-----LCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMS 306
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ Y LI L K K + + M + G ++ + L+ L + +
Sbjct: 307 SSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLE 366
Query: 413 PAAKIFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGI-HPSLGTFNVLL 470
+F + + T T LI A D+A+ ++ + ++G+ HP +N ++
Sbjct: 367 GGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY--AYNSII 424
Query: 471 AGLEKLGRVSDAEIYRKE 488
+ L K G+V++ + +E
Sbjct: 425 SALIKSGKVNEGQAVYQE 442
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 148/392 (37%), Gaps = 55/392 (14%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
T++ +++ L AG + A ++ +E C I +YT + L N +++EA + +++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
G P TY L+ L + G+ EEA+++ K+ + G PD LI+ K +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 223 RTIILILRYMKENRLALRYPVF----KEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
+ + M LAL + + LQ K+ + P+ ++
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT---- 176
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
++T I+G L K + A + + + + + V S +I C
Sbjct: 177 ---LSTMIDG-----------LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 222
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R+ D AL K + Y LI L K +EM +AG VY
Sbjct: 223 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVY-- 280
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
TY LI + AG+ D A ++ M
Sbjct: 281 -------------------------------TYNILISGFCKAGNTDAACGVFDDMSSSR 309
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
P++ T+ L++GL K +++ A +Y + K
Sbjct: 310 CSPNVVTYGTLISGLCKRRQLTKASLYYQHMK 341
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 30 KWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
K D YT N ++ + A F+ +S SR + + TY T++ + ++++
Sbjct: 276 KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR-CSPNVVTYGTLISGLCKRRQLTKAS 334
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
++ M+E+G D+ Y+S++ L +G ++G +++EM+ + + T + L
Sbjct: 335 LYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME-RSGVANSQTRTRLIFHL 393
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+RV EA ++ + + G+P + Y Y ++ L+++GK E ++ +M
Sbjct: 394 CKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISALIKSGKVNEGQAVYQEM 443
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/504 (21%), Positives = 215/504 (42%), Gaps = 64/504 (12%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA FN + SRGF D +Y + L F + +K + E M + G D +TY ++
Sbjct: 381 KAEQLFNDL-ESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTM 439
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H G D A+ ++ +MK P +++YT + L ++++EA + EM+ G+
Sbjct: 440 IHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGV 499
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P TY+ L+ +AGK EA E F M +G +PD+ A +++++ + E + +
Sbjct: 500 KPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMT 559
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-----FSPEFIS-------- 274
+ M + + + +++ L+T A++ + + V +P+ IS
Sbjct: 560 FYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYILVKGDC 619
Query: 275 DNDAVEFVTTDIEGPLSIDQ-----GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
++A + + I ID+ L ++ VA+D LL + + + + +
Sbjct: 620 YDEAAKMLRRAISDRYEIDRENLLSILSSYSSSGRHSVALD-LLELLKEHTPRSSQMITE 678
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++ + C ++ D AL + S ++ T + ALI ++ F + +++ +M
Sbjct: 679 ALVVMLCKAQQLDTALKEYSNSRELGFTGSFTMFEALIQCCLENELFTEASQVFSDMRFC 738
Query: 390 G--HSLGVYLGALLIH-RLGSARRPVPAAKIFSLLPED---------------------- 424
G S +Y +L++ ++G P A + L D
Sbjct: 739 GIKASECLYQSMMLLYCKMGF---PETAHHLIDLTETDGTVLNNISVYVDVIEAYGRLKL 795
Query: 425 ------------QKCTA----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
Q C + ALI Y ++G ++A ++ TM + G P++ + N
Sbjct: 796 WQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSING 855
Query: 469 LLAGLEKLGRVSDAEIYRKEKKSI 492
LL L GR+ + + +E + I
Sbjct: 856 LLQALIVDGRLEELYVVVQELQDI 879
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/446 (19%), Positives = 163/446 (36%), Gaps = 70/446 (15%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A+ + W++ ++ + +T+L + G+A + VF E + Y ++
Sbjct: 204 RAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLAVEVF-TRAEPSVENTVKVYNAM 262
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE-------ATDVYK 160
M + +G + +++ M+ + C P +VS+ +N R+K A ++
Sbjct: 263 MGVYARSGKFNKVQELFDLMRERGCEPDLVSFNT-----LINARLKAGEMTPNLAIELLT 317
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KCC 217
E+ + GL P+ TY L+ RA EEA+ +F M +PD N +I +C
Sbjct: 318 EVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCG 377
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
+G+ + N L R F P+ +S N
Sbjct: 378 LSGKAEQLF--------NDLESR--------------------------GFFPDAVSYN- 402
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
+ ++ N+ + + ++ D +T+I +
Sbjct: 403 -----------------SFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGK 445
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+ D AL + N + Y LI L K N + A ++ EM G +
Sbjct: 446 QGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRT 505
Query: 398 GALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
+ LI A +PV A + F L + Y+ ++ ++ +A+ YK M
Sbjct: 506 YSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMI 565
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSD 481
GI P + ++L L +V D
Sbjct: 566 HDGIMPEHSLYELMLRTLGNANKVED 591
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/401 (17%), Positives = 167/401 (41%), Gaps = 28/401 (6%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +++ +G K + V M++ I ++ + +++ + +G + A ++ M
Sbjct: 783 YVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMM 842
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
PT+ S ++ L ++ R++E V +E+ G + + ++++ RAG
Sbjct: 843 KDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIF 902
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
E +I+ M+ AG P ++ + C+ + R + +L M+E ++ L
Sbjct: 903 EVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVL 962
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL------K 302
+ + VA ++ Q++ + + + ++ D +LI++
Sbjct: 963 KMY-VAIDDFRKTTQIYQRIKEDGLEPDE---------------DTYNILIVMYCRDHRP 1006
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
K+ LV +D + + ++ + +++++ + + + A FE L+R+
Sbjct: 1007 KEGLVLMDEMRTVGLEPKLDTYKSLVASFGK----QQLVEQAEELFEELQSTGCKLDRSF 1062
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++ I + K + M G + LL+ GS+ +P A K+ S L
Sbjct: 1063 YHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLK 1122
Query: 423 EDQKCTAT--YTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
E +T Y+++I Y G + ++ K + +G+ P
Sbjct: 1123 ETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEP 1163
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 4/210 (1%)
Query: 32 DSYTVNQVL--KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D+Y + V+ + H P E L R+ G TY +++ FG+ + + + +F
Sbjct: 991 DTYNILIVMYCRDHRPKEGLVLMDEM--RTVGLEPKLDTYKSLVASFGKQQLVEQAEELF 1048
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
E +Q G +D Y +M N+G A ++ MK + PTI + M +
Sbjct: 1049 EELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVSYGSS 1108
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ +EA V + + + Y+ +++ VR G Y ++ +++E G++PD
Sbjct: 1109 GQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGLEPDHRIW 1168
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLAL 239
I + T IL+L +++ L
Sbjct: 1169 TCFIRAASLSQHTSEAILLLNALRDTGFDL 1198
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 63/144 (43%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + + MLD F A I +K ++ M+ G Y + L V
Sbjct: 880 GFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDV 939
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P + + + +K+ D ++ T +Y+ + + GL P+ TY +L+
Sbjct: 940 EAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVM 999
Query: 181 LVRAGKYEEALEIFSKMQEAGVQP 204
R + +E L + +M+ G++P
Sbjct: 1000 YCRDHRPKEGLVLMDEMRTVGLEP 1023
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 73/177 (41%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G+ Y M + K++ ++ + M+E G D + SV+ D
Sbjct: 912 KAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDF 971
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
I++ +K P +Y + + + R KE + EM GL P TY L
Sbjct: 972 RKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSL 1031
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ + E+A E+F ++Q G + D++ +I+++ +G + MK+
Sbjct: 1032 VASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKD 1088
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++ ++ R + + M+ G+ TY S++ V+ A
Sbjct: 985 GLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQA 1044
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++EE++ C Y MKI + +A ++ M G+ P T +LM
Sbjct: 1045 EELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLLMVS 1104
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+G+ +EA ++ S ++E + +I+ + G+ I L+ +KE L
Sbjct: 1105 YGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGL 1161
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 205/485 (42%), Gaps = 36/485 (7%)
Query: 35 TVNQVLK--THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK---YVF 89
T QVL+ PP KA+ FFNW SR+ GF HD +Y MLDI G ++ + +
Sbjct: 29 TFFQVLRFIASPP--KAFEFFNWASRN-GFAHDSRSYFMMLDILGRNGNLNIARNFLFSI 85
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
E + I+ +++ NAG + A+ ++ MK P+++++ + + IL
Sbjct: 86 ERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKR 145
Query: 150 DRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
R A V+ EM G+ P+ YT+ +L+ + +E F +M +PD
Sbjct: 146 GRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVT 205
Query: 209 CNILIEKCCKAGETRTIILILRYM--KENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
N L++ C+AG+ R +++ M K L+ + ++ + + E D L V
Sbjct: 206 YNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALV-VFE 264
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG-IMDKSIQLDS 325
+ + ND T I+G L + + I +L G + + D+
Sbjct: 265 EMVSRGLKPNDIT--YNTLIKG-----------LCEVQKFDKIKEILGGAVGGRGFVPDT 311
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+T++ CD D AL F+ ++ + + Y LI L + F + ++ ++
Sbjct: 312 CTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDK 371
Query: 386 MTKA-------GHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTALIGV 437
++ G + V + L + A ++F L+ + + +Y LI
Sbjct: 372 LSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIG 431
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADAL 497
+ G+ + K+ M R+ P T+ +L+ G + G A Y+ ++ +++ L
Sbjct: 432 HCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILA--YKTLERMLKSSYL 489
Query: 498 SKDAV 502
K +V
Sbjct: 490 PKTSV 494
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 32 DSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFN--HDRFTYTTMLDIFGEAKRISSMK 86
D+YT N +++ + +++ + FF +SR FN D TY T++D A ++
Sbjct: 167 DTYTFNILIRGFCKNSMVDEGFRFFKEMSR---FNCEPDVVTYNTLVDGLCRAGKVRIAH 223
Query: 87 YVFELM--QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
V + M + K ++ D VTYT+++ ++D A+ ++EEM + P ++Y +K
Sbjct: 224 NVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIK 283
Query: 145 ILFLNDRVKEATDVYKEMIQ-RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
L + + ++ + RG P+ TY LM AG ++EAL++F KM+E VQ
Sbjct: 284 GLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQ 343
Query: 204 PDKAACNILIEKCCKAGE 221
PD A ++LI C+ G+
Sbjct: 344 PDSATYSVLIRNLCQRGD 361
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 156/362 (43%), Gaps = 26/362 (7%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
D+A+ L+ +P++ D+YT N +++ A + + R R D TYT +L+
Sbjct: 143 DAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV-PDVVTYTILLE 201
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + + M++KG D VTY V++ + G VD A+ + + C P
Sbjct: 202 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 261
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
VSY +K L +R ++A ++ EM Q+G PPN T+ +L+ +L R G E ALE+
Sbjct: 262 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 321
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTF 251
++ + G P+ + N L+ CK + + L M + Y AL
Sbjct: 322 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 381
Query: 252 KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
D LL Q+ + +P IS N ++ +T K A++
Sbjct: 382 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK-----------------AGKTKEALE 424
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
LL+ ++ K +Q D STI C R + A+ AF M + Y A+I L
Sbjct: 425 -LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 483
Query: 371 IK 372
K
Sbjct: 484 CK 485
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ +LM +G D V+Y +++ L +G+VD A
Sbjct: 328 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 387
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + ++K K C P ++SY + L + KEA ++ EM+ +GL P+ TY+ +
Sbjct: 388 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 447
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L R + E+A+ F K+Q+ G++P+ N +I CK ET + I + YM N
Sbjct: 448 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 502
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 159/391 (40%), Gaps = 66/391 (16%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D + Y +++ AG +D A + EM ++ P +Y ++ L R A V
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVL 181
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
EM++R P+ TYT+L+E + Y++A+++ +M++ G PD N+++ C+
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241
Query: 220 GETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
G I L+ + + Y + + L T + ++ + L+ ++ + P
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP------ 295
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEV 334
P + +++ L +K LV A++ +L I +S + ++
Sbjct: 296 ------------PNVVTFNMLISFLCRKGLVEPALE-VLEQIPKYGCTPNSLSYNPLLHA 342
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C ++ D A+ A + +++ +P + +T S
Sbjct: 343 FCKQKKMDKAM-------------------AFLDLMVSRGCYPDIVSYNTLLTALCRSGE 383
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIY 451
V + L+H+L +D+ C +Y +I AG +AL++
Sbjct: 384 VDVAVELLHQL-----------------KDKGCAPVLISYNTVIDGLTKAGKTKEALELL 426
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M KG+ P + T++ + AGL + R+ DA
Sbjct: 427 NEMVSKGLQPDIITYSTIAAGLCREDRIEDA 457
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 42/226 (18%)
Query: 18 DSAQDLLKNLP---IKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
+ A ++L+ +P +S + N +L M+KA F + + SRG D +Y T
Sbjct: 315 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV-SRGCYPDIVSYNT 373
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + + + +++KG ++Y +V+ L+ AG A+ + EM K
Sbjct: 374 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 433
Query: 132 CYPTIVSYTAYMKILFLNDRVKEAT----------------------------------- 156
P I++Y+ L DR+++A
Sbjct: 434 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 493
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
D++ MI G PN TYT+L+E L G +EA ++ ++ GV
Sbjct: 494 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 199/451 (44%), Gaps = 41/451 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG N + TY T++D F + + + V+ M +G+ ++ S+++ L G +
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ ++++ V+YT + LF + A +E++ R + P+ Y V
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L GK++EA ++M+ G++PD++ N +I C+ GET + +L MK + +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVE------------- 280
+ Y L ++ LL + V FSP ++ ++
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680
Query: 281 ----FVTTDIEGPLSIDQGLVLIL----LKKKNLVAIDSLL-SGIMDKSIQLDSAVISTI 331
+ + +++ L+ +L + +K V ++ +L SGI +I ++ ++
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG-- 738
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
+C D A + + +++ + L+G L + + ++ EM K+G
Sbjct: 739 ---HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSAD 445
+L G V A +++ +P+ +TY ALI + AG
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPK----VSTYNALISDFTKAGMMT 851
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+A +++K M ++G+HP+ T+++L++G ++
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 206/465 (44%), Gaps = 41/465 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D Y T++ F A ++ + + V ++M+E G++ + TYT + + V+
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++E M +V+ +A + L + R EA +++EM + G PN TY L+
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L +AG+ +E L + +M GV D L++ K G+T + LR+ + L+
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVE-FVTTDIEGPLSID 293
+ Y V +AL DE + +L ++ + SP ++ + + FV + +D
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL-----LD 431
Query: 294 QGLVLILLKKK-----NLVAIDSLLSGIM-----DKSIQLDSAVISTIIEVN-------C 336
+ + K+ N+V +L+ G D ++++ ++ ++VN
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491
Query: 337 DHRRRDG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE-----MT 387
+ R++G A+ F+ + L+L+ Y LI L K P + +E M
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551
Query: 388 KAGHSLGVYLGAL-LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
V++ L ++ + A+ + + L P+ +TY +I + G K
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ----STYNTMIVSHCRKGETAK 607
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
ALK+ M I P+L T+N L+AGL G V A+ E S
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 188/462 (40%), Gaps = 68/462 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +A + + V M+EK I+ + VT++SV++ G +D A M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + P +V+Y + F A +VY +M+ G+ N + L+ L + GK
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR-YMKENRL--ALRYPVF 244
EEA+ +F +G+ D LI+ KAG+ T + M N L A+ Y VF
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 245 KEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK- 302
L E S L ++ P D + T + + L LL
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKP------DQSTYNTMIVSHCRKGETAKALKLLHE 614
Query: 303 ------KKNLVAIDSLLSGI-----MDKSIQLDSAVIST-----------IIEVNCDHRR 340
K NL+ ++L++G+ ++K+ L + ++S +++ RR
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D L E+ + L+ + T Y L+ +L K ++EEM
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM-------------- 720
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LGS P T T+ ALI + + D A Y M + I
Sbjct: 721 ----LGSGIAPD---------------TITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKD 500
P++ TFN LL GLE +GR+ +A + EK ++ + L+ D
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 24 LKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEA 79
++N+ +K D T N ++ +H KA + + S + TY T++ +FG
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS-IKPNLITYNTLVAGLFGTG 638
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ KY+ M G + ++T+ V+ S + +D ++I E M + I Y
Sbjct: 639 A-VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVY 697
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+++L + ++AT V +EM+ G+ P+ T+ L+ ++ + A +++M
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 200 AGVQPDKAACNIL---IEKCCKAGETRTIIL 227
+ P+ A N L +E + GE T+++
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLI 788
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ QVL H KA + + S G D T+ ++ ++ + + + M
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGS-GIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+ I+ + T+ +++ L + G + A + EM+ P ++Y E
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE 817
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A +Y EM+ +G P TY L+ +AG +A E+F MQ+ GV P +IL+
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877
Query: 215 KCCKAGETRTIILILRYMKE 234
+ + L+ MKE
Sbjct: 878 GWSRIRNGTEVKKCLKDMKE 897
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T+L RI V M++ G+ + +TY + + A+ ++ EM
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEM 825
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + +Y A + + +A +++K+M +RG+ P TY +L+ R
Sbjct: 826 VGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNG 885
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
E + M+E G P K + + K G T
Sbjct: 886 TEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTAL 434
P + + MT G + V L+ A + A + ++ E ATYT
Sbjct: 186 PAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPF 245
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
I Y ++A +Y+ M R G+ + T + L+AGL + GR S+A +E + A
Sbjct: 246 IVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+ + K +E A+ F + +RG D +TY T+++ + +IS K + + M+EK
Sbjct: 162 IKALCKNEETVESAFRLFREMP-NRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEK 220
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G++ V+YTS++H L + ++D A+ + EEM + P + +Y++ M L + +A
Sbjct: 221 GLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQA 280
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
++ + M++R L PN TY+ L+ L + GK+ EA+EI +M+ G++PD +I
Sbjct: 281 MELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISG 340
Query: 216 CCKA 219
C A
Sbjct: 341 LCAA 344
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/487 (20%), Positives = 193/487 (39%), Gaps = 35/487 (7%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSM 85
P + + V Q++K + K + F+ + S GF HD T+ M+ +
Sbjct: 10 PKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPA 69
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ + E M+++ + + ++ A+ ++ +M+ + PT SY I
Sbjct: 70 EGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDI 129
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK-YEEALEIFSKMQEAGVQP 204
L + VK A YKEM ++G+PP + +L++ L + + E A +F +M G QP
Sbjct: 130 LVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQP 189
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLL 261
D LI CK G+ +L M+E L+ + Y L DE LL
Sbjct: 190 DSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELL 249
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
E + IE + L+ L K + LL ++ + +
Sbjct: 250 E-----------------EMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRL 292
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
+ ST+I C + A+ + L + Y +I L + + A
Sbjct: 293 LPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAAN 352
Query: 382 IVEEM-------TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYT 432
++EM +A + V + +++ L + P A +++ + T+
Sbjct: 353 FIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFD 412
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL---EKLGRVSDAEIYRKEK 489
L+ + G +KA +I + M G P G +NVL+ GL +K+ ++ + ++
Sbjct: 413 CLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQ 472
Query: 490 KSIQADA 496
K ++A++
Sbjct: 473 KFVEAES 479
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 172/408 (42%), Gaps = 16/408 (3%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++ +I +F M +G + ++Y ++++ L G+ AV+++++M
Sbjct: 160 TFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P +V+Y + L + V +A + EM+ RG+PPN +TY ++ G+
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA +F +M V PD IL++ CK G L+ M E + +
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ + + L+ + F I A + +I L+ K + +
Sbjct: 340 MDGYCL----QRLMNEAKKVFEI-MIRQGCAPGVHSYNI---------LINGFCKSRRMD 385
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
SLL+ + K++ D+ ST+++ C R AL F+ L Y L+
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--Q 425
K + ++++ M + + +LI + A + A ++FS L D +
Sbjct: 446 DGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIR 505
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
TYT +I G +D+A +++ M G P+ ++NV++ G
Sbjct: 506 PTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 553
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 186/431 (43%), Gaps = 35/431 (8%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ L F + K+ S++ + M G+ + + +++ L VD AV+I +M
Sbjct: 91 FGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMF 150
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+PT ++ A + L ++KEA +++ EM++RG PN +Y ++ L + G
Sbjct: 151 KLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTS 210
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A+++F KM++ G +PD N +I+ CK + L M + + + +
Sbjct: 211 MAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMV 270
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAV----EFVTTDIEGPLSIDQGLVLILLKKK 304
F +L Q+ N+A E V D+ P ++ +++ L K+
Sbjct: 271 HGF-------CILGQL-----------NEATRLFKEMVGRDVM-PDTVTLTILVDGLCKE 311
Query: 305 NLVAIDSLLSGIM-DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+V+ L+ M +K ++ + + + +++ C R + A FE ++ +Y
Sbjct: 312 GMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSY 371
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF----- 418
LI K + ++ EM + + L+ L RP A IF
Sbjct: 372 NILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCS 431
Query: 419 -SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
LLP TY+ L+ + G D+ALK+ K+M K + P++ +L+ G+ G
Sbjct: 432 YGLLPN----LVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAG 487
Query: 478 RVSDA-EIYRK 487
++ A E++ K
Sbjct: 488 KLEVAKELFSK 498
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T T ++D + +S + VFE M EKG+ + TY ++M ++ A ++
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E M + C P + SY + + R+ EA + EM + L P+ TY+ LM+ L +
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
G+ +EAL IF +M G+ P+ +IL++ CK G + +L+ M+E +L
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 171/399 (42%), Gaps = 49/399 (12%)
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V++ +M L + S + L + V A + +M + G+ P T+ L+
Sbjct: 108 VSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALING 167
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L GK +EA+E+F++M G +P+ + N +I CK G T + + + M++N
Sbjct: 168 LCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPD 227
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID------- 293
+ + + D L+ NDA+EF++ ++ + +
Sbjct: 228 VVTYNTIIDSLC----KDRLV--------------NDAMEFLSEMLDRGIPPNVFTYNCM 269
Query: 294 -QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
G ++ L L ++ + + D+ ++ +++ C A L FE
Sbjct: 270 VHGFCIL----GQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325
Query: 353 KMDLNLERTAYLALI-GILIK--LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ + + Y AL+ G ++ +N KV EI M + G + GV+ +LI+ +R
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEI---MIRQGCAPGVHSYNILINGFCKSR 382
Query: 410 RPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
R A + + L P+ T TY+ L+ G +AL I+K MC G+ P+L
Sbjct: 383 RMDEAKSLLAEMYHKALNPD----TVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNL 438
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
T+++LL G K G + +A K KS+Q L + V
Sbjct: 439 VTYSILLDGFCKHGHLDEA---LKLLKSMQEKKLEPNIV 474
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A L F ++ +G + TY ++D + + ++ K VFE+M +G +Y
Sbjct: 314 VSEARLVFETMTE-KGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYN 372
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ + +D A ++ EM K P V+Y+ M+ L R KEA +++KEM
Sbjct: 373 ILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSY 432
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GL PN TY++L++ + G +EAL++ MQE ++P+ ILIE AG+
Sbjct: 433 GLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 100/189 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ N D TY+T++ + R +F+ M G+ + VTY+ ++ G +D
Sbjct: 397 KALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDE 456
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + + M+ K+ P IV +T ++ +F+ +++ A +++ ++ G+ P TYTV+++
Sbjct: 457 ALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIK 516
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L++ G +EA ++F KM++ G P+ + N++I+ + ++ T I ++ M R +
Sbjct: 517 GLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSA 576
Query: 240 RYPVFKEAL 248
F+ L
Sbjct: 577 NLSTFQMLL 585
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D AL +F V+M+ + +G K + V + +M G + VY +L
Sbjct: 70 DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129
Query: 402 IH---RLGSARRPVPA-AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
I+ RL V K+F L +T+ ALI + G +A++++ M R+
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKL--GIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQADALSKDAV 502
G P++ ++N ++ GL K G S A ++++K E+ + D ++ + +
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTI 234
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 4/190 (2%)
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
KKK + SL + + + + ++ +I C D A+ K+ ++ +
Sbjct: 100 KKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTAS 159
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+ ALI L + E+ EM + GH V +I+ L A +F +
Sbjct: 160 TFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219
Query: 422 PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
E C TY +I + A++ M +GI P++ T+N ++ G LG+
Sbjct: 220 -EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQ 278
Query: 479 VSDAEIYRKE 488
+++A KE
Sbjct: 279 LNEATRLFKE 288
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 184/449 (40%), Gaps = 31/449 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G FTY M+D + + + +F M+E G D VTY S++ G +D
Sbjct: 250 GIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDEC 309
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I+E+MK +C P +++Y A + +R+ +A + EM GL PN TY+ ++
Sbjct: 310 ICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 369
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G +EA++ F M+ + P++ LI+ CKAG + ++ + + + L
Sbjct: 370 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 429
Query: 241 YPVF-------------KEALQTFK------VADENDSLLWQVHPQF-SPEFISDNDAVE 280
+ KEA + F+ VA ++ VH + E D ++
Sbjct: 430 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 489
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG-IMDKSIQLDSAVISTIIEVNCDHR 339
+ P + G +L L ++ + LL G I + I ++ + +T+++
Sbjct: 490 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 549
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ AL E + + L Y ALI L K + M++ G V +
Sbjct: 550 QATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYT 609
Query: 400 LLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
L+ L A K+F ++P+ YTALI G+ +AL +
Sbjct: 610 ALVDGLCKNNCFEVAKKLFDEMLDKGMMPD----KIAYTALIDGNMKHGNLQEALNLRDR 665
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M G+ L + L+ GL G+V A
Sbjct: 666 MIEIGMELDLHAYTALIWGLSHSGQVQKA 694
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 186/424 (43%), Gaps = 33/424 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M KA+ F + + ++ G + TY+T +D F + + F M+ + + TYT
Sbjct: 341 MPKAFEFLHEM-KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ AG++ A+ + EE+ +V+YTA + L R+KEA +V++ M+
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN TYT L+ ++A + E A +I +M+E ++PD ++ C
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519
Query: 226 ILILRYMKE---NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
L++ +KE N A+ Y +A FK ++L + + + +
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAY--FKSGQATEAL----------TLLEEMLDLGLI 567
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK-SIQLDSAVISTIIEVNCDHRRR 341
T++ ID L K LV G M + +Q + AV + +++ C +
Sbjct: 568 ATEVTYCALIDG------LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCF 621
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
+ A F+ + + ++ AY ALI +K + + + M + G L ++ L
Sbjct: 622 EVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTAL 681
Query: 402 IHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
I L + + A + +LP++ Y LI Y++ G D+AL++ M
Sbjct: 682 IWGLSHSGQVQKARNLLDEMIGKGVLPDE----VVYMCLIKKYYALGKVDEALELQNEMA 737
Query: 456 RKGI 459
++G+
Sbjct: 738 KRGM 741
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 152/380 (40%), Gaps = 16/380 (4%)
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+++H LS G D + +++M ++ +Y + L ++ A ++ +M +
Sbjct: 224 NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKE 283
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
G P+ TY L++ + G +E + IF +M++A PD N LI CK
Sbjct: 284 AGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPK 343
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
L MK N L + TF A + +L Q + +F D V
Sbjct: 344 AFEFLHEMKANGLKPNVVTY----STFIDAFCKEGML-----QEAIKFFVDMRRVALTPN 394
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ ID K NL L+ I+ I+L+ + +++ C+ R A
Sbjct: 395 EFTYTSLIDAN-----CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEA 449
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F + + + Y AL+ IK +I++EM + + L ++
Sbjct: 450 EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 509
Query: 405 LGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L + R A + + E T YT L+ YF +G A +AL + + M G+ +
Sbjct: 510 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIAT 569
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
T+ L+ GL K G V +A
Sbjct: 570 EVTYCALIDGLCKSGLVQEA 589
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 178/478 (37%), Gaps = 80/478 (16%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK----------------RISSMKYVFELM 92
A FF W GF H Y ++ I A+ R+ VF+L+
Sbjct: 115 ALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLL 174
Query: 93 -QEKGINIDAV-TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
+ + + + ++ L G ++ A + +M+ +P S A + L
Sbjct: 175 WATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVG 234
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
R + +K+M G+ + +TY ++++YL + G E A +F++M+EAG PD N
Sbjct: 235 RGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYN 294
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
LI+ K G I I MK+ AD + P
Sbjct: 295 SLIDGHGKLGLLDECICIFEQMKD-------------------ADCD------------P 323
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ I+ N L+ K + + L + ++ + ST
Sbjct: 324 DVITYN------------------ALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 365
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
I+ C A+ F ++ L Y +LI K + ++VEE+ +AG
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSA 444
L V L+ L R A ++F + P + TYTAL+ + A
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQE----TYTALVHGFIKAKEM 481
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
+ A I K M K I P L + +L GL R+ +A++ E I+ ++ +AV
Sbjct: 482 EYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGE---IKESGINTNAV 536
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 143/402 (35%), Gaps = 86/402 (21%)
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMI--QRGLP----------------PNCYTYTVLME 179
+Y + ILF +A V KE+I +R LP P + L
Sbjct: 134 AYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFS 193
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L+ G EEA E F KM++ V P +CN L+ + K G
Sbjct: 194 ALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRG----------------- 236
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
S +F D A + + ID
Sbjct: 237 ---------------------------DLSRKFFKDMGAAGIKRSVFTYNIMIDY----- 264
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K+ +L SL + + + D +++I+ + D + FE D + +
Sbjct: 265 LCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPD 324
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y ALI K PK E + EM G V + I A K F
Sbjct: 325 VITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFV 384
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+L P + TYT+LI AG+ +ALK+ + + + GI ++ T+ LL GL
Sbjct: 385 DMRRVALTPNE----FTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440
Query: 474 EKLGRVSDA-EIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
+ GR+ +A E++R L+ P +E L++G
Sbjct: 441 CEEGRMKEAEEVFRA--------MLNAGVAPNQETYTALVHG 474
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 203/477 (42%), Gaps = 36/477 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEKA+ + + + G + F ++L+ F E + +F+ E GI + VTY
Sbjct: 376 MEKAYELYTRM-KLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYN 433
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ WL G V+ A N+WE+M K P++VSY + + +A + K +++R
Sbjct: 434 ILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILER 493
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRT 224
GL PN TYT+L++ + G E A +F +M A + P N +I K G + T
Sbjct: 494 GLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSET 553
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW---QVHPQFSPEFISDNDAVEF 281
+ ++K+ ++ FK + +LL SP+ I+
Sbjct: 554 QDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVIT------- 606
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
T+ I+G L K N + + + S + K ++LD S +I+ C
Sbjct: 607 YTSLIDG------------LCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHD 654
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
+ A F + + L Y ++I I LN + +EM K + +
Sbjct: 655 MESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTS 714
Query: 401 LIHRLGSARRPVPAAKIFS-LLPED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+I L + A ++S +L +D YT LI + G + A KI K M
Sbjct: 715 IIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNN 774
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGG 515
I PS+ +N+L+AG + G + +A +R + + L K VP ++ D+L G
Sbjct: 775 ITPSVLVYNILIAGNFREGNLQEA--FR-----LHDEMLDKGLVP-DDTTYDILVNG 823
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 209/489 (42%), Gaps = 51/489 (10%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG-EAKRISSMK-----YVF----- 89
K++P + A FF+ V R RGF + ++ I +K SS++ YVF
Sbjct: 71 KSNP--KSALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNNYVFGDATP 128
Query: 90 ----------ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
E G D+ + ++ + AV + M + P +
Sbjct: 129 SAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIM 188
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+ + + V +A +Y EM++RG+ +CYT V+M ++ GK+EE + F + +
Sbjct: 189 NNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKG 248
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--------NRLALRYPVFKEA--LQ 249
G++ D AA +IL++ C+ + +L+ M+E A+ K+ ++
Sbjct: 249 RGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVE 308
Query: 250 TFKVADENDSLLWQVHPQFSPEFISD-------NDAVEFVTTDIEGPLSIDQGLVLILL- 301
++ DE S+ ++ + + N A++ +EG + D + +L+
Sbjct: 309 ALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLIN 368
Query: 302 ---KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
K ++ L + + IQ + ++++++E + + A F+ +V+ +
Sbjct: 369 GCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT- 427
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAG--HSLGVYLGALLIH-RLGSARRPVPAA 415
Y L+ L +L + + E+M G SL Y +L H + G +
Sbjct: 428 NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSML 487
Query: 416 KIFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
K S+L K A TYT LI +F G +++A +++ M I P+ TFN ++ GL
Sbjct: 488 K--SILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLG 545
Query: 475 KLGRVSDAE 483
K GRVS+ +
Sbjct: 546 KTGRVSETQ 554
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 188/448 (41%), Gaps = 21/448 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +T ++ + + ++ F+ + +G+ +DA Y+ ++ + D++
Sbjct: 214 RGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNL 273
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +EM+ P+ +YTA + EA + EM+ GLP N LM+
Sbjct: 274 ACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMK 333
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G AL++F ++ E GV PD ++LI C K G+ + MK +
Sbjct: 334 GYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQP 393
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L+ F +LL + F ++AVE T++ + ++L
Sbjct: 394 NVFIVNSLLEGF----HEQNLLEHAYGLF-------DEAVEHGITNV-----VTYNILLK 437
Query: 300 LLKKKNLV-AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L + V +L ++ K I + +I +C D A + ++ L
Sbjct: 438 WLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKP 497
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG-SARRPVPAAKI 417
Y LI K + + E+M A + + +I+ LG + R K+
Sbjct: 498 NAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKL 557
Query: 418 FSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ + + T+ TY ++I +F G+ D AL Y+ MC GI P + T+ L+ GL K
Sbjct: 558 NNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKS 617
Query: 477 GRVSDA-EIYRKEK-KSIQADALSKDAV 502
++ A E++ K K ++ D ++ A+
Sbjct: 618 NKIGLALEMHSDMKYKGMKLDVVAYSAL 645
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S ++ K H ME A FF + G + Y +M+ F + + + + M
Sbjct: 643 SALIDGFCKMHD-MESASKFFTEL-LDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM 700
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ + D YTS++ L G + A++++ EM K+ P IV YT + L N ++
Sbjct: 701 IKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQL 760
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+ A+ + KEM + P+ Y +L+ R G +EA + +M + G+ PD +IL
Sbjct: 761 ENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDIL 820
Query: 213 IEKCCKAGET 222
+ K T
Sbjct: 821 VNGKLKVSHT 830
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 176/409 (43%), Gaps = 35/409 (8%)
Query: 7 NVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
NV+K + ++L+ +L I ++S Q H ++ A+ + + + RG D+
Sbjct: 307 NVHKAMGLLDEMLERNLVPDL-ITYNSLIAGQCRAGH--LDSAYRLLSLM-KERGLVPDQ 362
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY +D ++ R+ + +F+ + E+G++ + + Y+ ++ G VD A ++E+
Sbjct: 363 RTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEK 422
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K C P ++ A + L +KEA ++ +M++ GL P YT+ +L+ +++ G
Sbjct: 423 MLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGD 482
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE------------ 234
+++A + KM +G +P N IE C AG+ + ++ MKE
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTS 542
Query: 235 -----NRLALRYPVFKEALQTFKVAD---ENDSLLWQVHPQFSPEFI---SDNDAVEFVT 283
+L L Y F + L++ AD + + L + F ++ S VE V+
Sbjct: 543 LIKAYGKLGLTYSAF-DVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVS 601
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ P S + K + L + DS +I C
Sbjct: 602 NFGDVPGS-------NMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGI 654
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
AL + K ++ + A+I KL + + A IVE+M +GHS
Sbjct: 655 ALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHS 703
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 185/452 (40%), Gaps = 91/452 (20%)
Query: 29 IKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+ D YT N ++ + M ++A F + ++ G + D FT T+ + + +K + S
Sbjct: 188 VSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQA-GLSPDYFTSTSFILGYCRSKDVDSA 246
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
VFE M N + V+Y ++H L AG +D AV+++ MK CYP + +YTA +K
Sbjct: 247 FRVFEEMP----NRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKG 302
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L V +A + EM++R L P+ TY L+ RAG + A + S M+E G+ PD
Sbjct: 303 L-CRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPD 361
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
+ I+ CK+ NR+ +EA + F DSL
Sbjct: 362 QRTYGCFIDFLCKS---------------NRV-------EEARRLF------DSL----- 388
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
+ E +S N V + I+G + + + L ++ K+ ++
Sbjct: 389 ---TEEGVSAN--VIMYSVLIDGYCKVGK-----------VDEAGCLFEKMLSKNCSPNA 432
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ +I C AL F+ VKM L + LIG ++K F + +++
Sbjct: 433 YTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQK 492
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
M +G P A+ TY A I VY SAG
Sbjct: 493 MMSSGEK--------------------PVAR-------------TYNAFIEVYCSAGKVQ 519
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+A + M +G+ P T+ L+ KLG
Sbjct: 520 EAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLG 551
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 198/482 (41%), Gaps = 42/482 (8%)
Query: 7 NVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
++ IL W + L LP S+ V+ + + A F W+S++ F H+
Sbjct: 43 HLLSILSKPNWQNNPSLKSLLPAITPSH-VSSLFSLNLDPHTALQFSYWISQTPNFKHNV 101
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+Y ++L + K +S + + S++ +A D +I +
Sbjct: 102 DSYASLLTLIDHHKIVSDVPKII---------------VSMIKCCYSAPDALFVSDICRK 146
Query: 127 MKLKECYPTIVSYTAYMKILFLNDR---VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
M + T +S Y ++L L R V E +Y EM++ + + YT+ +++ +
Sbjct: 147 MSKDDI--TKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCK 204
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
G +EA + KM +AG+ PD I C++ + + + M NR + Y
Sbjct: 205 MGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP-NRNEVSYNQ 263
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
L DE SL F+ D + ++ ++ +GL +
Sbjct: 264 LIHGLCEAGRIDEAVSL-----------FVRMKDDCCY--PNVYTYTALIKGLC-----R 305
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
KN+ LL ++++++ D +++I C D A + L ++ Y
Sbjct: 306 KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTY 365
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLP 422
I L K N + + + +T+ G S V + ++LI + A +F +L
Sbjct: 366 GCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLS 425
Query: 423 EDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
++ A T+ ALI SAG+ +AL ++ M + G+ P++ TFN+L+ + K G D
Sbjct: 426 KNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDD 485
Query: 482 AE 483
A
Sbjct: 486 AH 487
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 66/148 (44%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+FE M++ G D+ Y ++ + ++ A+ + ++M+ + P+ + + A +
Sbjct: 623 LFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCC 682
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ EA ++ ++MI G P L+ L G+ E +F K++ G D+
Sbjct: 683 KLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEI 742
Query: 208 ACNILIEKCCKAGETRTIILILRYMKEN 235
A ILI+ K G + M++N
Sbjct: 743 AWKILIDGMLKQGLVEEFSQLFEEMEKN 770
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 192/475 (40%), Gaps = 34/475 (7%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
++NL +D V VL E A FF WV RS F HDR T+ +++I G A +++
Sbjct: 3 IRNLVPSFDHELVYNVLHAAKTSEHALQFFRWVERSNLFEHDRETHLKIIEILGRASKLN 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M +KG+ D + ++ AG V +V ++++M+ TI SY A
Sbjct: 63 HARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALF 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K++ R A + +M+ G+ P +T+ V++ +GK + A+ F M+ +
Sbjct: 123 KVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAMRFFEDMKSREIS 182
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD N +I C + + MK + + ++ + D Q
Sbjct: 183 PDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVD-------Q 235
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEG----PLSIDQGLVLI-LLKKKNLVAIDSLLSGIMD 318
VH DA+ V +++G P +I +L L + S+L ++D
Sbjct: 236 VH-----------DALRLV-EEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVD 283
Query: 319 KSIQ-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
K I D+++ +I C+ D A + +++ + E Y LI K
Sbjct: 284 KYIAPKDNSIFMRLISSQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHD 343
Query: 378 KVAEIVEEMTKAG---------HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
+ ++++++ + H ++ + + + A + LL + T
Sbjct: 344 RAVKLLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCSNGQTAKAEALVRQLLKLGVQDT 403
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI Y GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 404 TALNTLIRGYAQEGSPDSAFELLKIMLRRKVDSEKSAYDALVQSYLKKNEPADAK 458
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 22/341 (6%)
Query: 59 SRGFNHDRFTYTTML-DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
S G R T+ M+ F K ++M++ FE M+ + I+ D VTY ++++ +
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKMDTAMRF-FEDMKSREISPDVVTYNTMINGCYRVKKM 201
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + EMK K PT+V+YT +K D+V +A + +EM G+ PN TY+ L
Sbjct: 202 DEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVHDALRLVEEMKGYGIKPNAITYSTL 261
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENR 236
+ L AGK EA I +M + + P D + LI C+AG +L+ M
Sbjct: 262 LPGLCNAGKMSEAQSILKEMVDKYIAPKDNSIFMRLISSQCEAGNLDAAADVLKAM---- 317
Query: 237 LALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+R V EA ++ F A ++D + + + I + + P
Sbjct: 318 --IRLSVPTEAGHYGVLIENFCKAGQHDRAVKLLDKLIEKDIILRPQSTLHMEPSAYNP- 374
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
++ L ++L+ ++ +Q D+ ++T+I D A +
Sbjct: 375 -----MIEYLCSNGQTAKAEALVRQLLKLGVQ-DTTALNTLIRGYAQEGSPDSAFELLKI 428
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY AL+ +K N ++ M + H
Sbjct: 429 MLRRKVDSEKSAYDALVQSYLKKNEPADAKAALDSMIENDH 469
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R +L +I IL + + I+ +M K G + L+I G A + K+F
Sbjct: 44 DRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLF 103
Query: 419 SLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G
Sbjct: 104 QKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLS 163
Query: 477 GRVSDAEIYRKEKKS 491
G++ A + ++ KS
Sbjct: 164 GKMDTAMRFFEDMKS 178
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T+ +I +F +G D A++ ++ M + I P + T+N ++ G ++ ++ +AE Y E
Sbjct: 152 TFNVMIWGFFLSGKMDTAMRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEM 211
Query: 490 K 490
K
Sbjct: 212 K 212
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 166/405 (40%), Gaps = 56/405 (13%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M + G VT +S+++ + + AV + ++M P +++T + LFL+++
Sbjct: 70 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 129
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
EA + M+QRG PN TY V++ L + G + A + +KM+ A ++ D N
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189
Query: 212 LIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTF-KVADENDSLLWQVHPQ 267
+I+ CK + + + M+ + + Y L ++ + +D + L + +
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+P ++ N L+ +K+ V + L ++ +SI D
Sbjct: 250 INPNLVTFN------------------ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 291
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++I C H R D A FE+ V D + Y LI K E+ EM+
Sbjct: 292 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 351
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
G L D T TYT LI F G D A
Sbjct: 352 HRG------------------------------LVGD---TVTYTTLIQGLFHDGDCDNA 378
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
K++K M G+ P + T+++LL GL G++ A E++ +KS
Sbjct: 379 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 423
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I + T N ++ K +E L + + RS +
Sbjct: 229 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS--ID 286
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY ++++ F R+ K +FE M K D TY +++ + V+ +
Sbjct: 287 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 346
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+YT ++ LF + A V+K+M+ G+PP+ TY++L++ L
Sbjct: 347 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 406
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+ALE+F MQ++ ++ D +IE CKAG+
Sbjct: 407 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 444
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 98/187 (52%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
N + T+ ++D F + + + + + M ++ I+ D TY S+++ +D A
Sbjct: 251 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 310
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++E M K+C+P + +Y +K + RV++ T++++EM RGL + TYT L++ L
Sbjct: 311 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 370
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
G + A ++F +M GV PD +IL++ C G+ + + YM+++ + L
Sbjct: 371 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430
Query: 243 VFKEALQ 249
++ ++
Sbjct: 431 IYTTMIE 437
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 172/432 (39%), Gaps = 17/432 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D T+TT++ + S + + M ++G + VTY V++ L GD+D A
Sbjct: 109 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 168
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N+ +M+ + +V + + L V +A +++KEM +G+ PN TY+ L+
Sbjct: 169 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 228
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G++ +A ++ S M E + P+ N LI+ K G+ + M + +
Sbjct: 229 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 288
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F + D D S + D D T I+G
Sbjct: 289 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT---YNTLIKG-----------F 334
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K K + L + + + D+ +T+I+ D A F+ V + +
Sbjct: 335 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 394
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y L+ L K E+ + M K+ L +Y+ +I + A + +F
Sbjct: 395 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 454
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-AGLEKLG 477
L + TY +I S +A + K M G P GT+N L+ A L
Sbjct: 455 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 514
Query: 478 RVSDAEIYRKEK 489
+ + AE+ R+ +
Sbjct: 515 KAASAELIREMR 526
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 39/263 (14%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTY 69
K+ + D + I D +T N ++ H ++KA F ++ F D TY
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTY 327
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T++ F ++KR+ +F M +G+ D VTYT+++ L + GD D A ++++M
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDV---------------YKEMIQ---------- 164
P I++Y+ + L N ++++A +V Y MI+
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447
Query: 165 ----------RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+G+ PN TY ++ L +EA + KM+E G PD N LI
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 507
Query: 215 KCCKAGETRTIILILRYMKENRL 237
+ G+ ++R M+ R
Sbjct: 508 AHLRDGDKAASAELIREMRSCRF 530
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 168/416 (40%), Gaps = 18/416 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ T +++L+ + KRIS + + M E G D +T+T+++H L A
Sbjct: 74 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 133
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + + M + C P +V+Y + L + A ++ +M + + + +++
Sbjct: 134 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 193
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + ++AL +F +M+ G++P+ + LI C G +L M E ++
Sbjct: 194 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 253
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
F + F + E + D+ + DI S+ G +
Sbjct: 254 LVTFNALIDAF----------VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM-- 301
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR-RDGALLAFEYSVKMDLNLE 359
L + ++ K D +T+I+ C +R DG L E S + L +
Sbjct: 302 --HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGD 358
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI L ++ ++M G + ++L+ L + + A ++F
Sbjct: 359 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 418
Query: 420 LL--PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ E + YT +I AG D ++ ++ KG+ P++ T+N +++GL
Sbjct: 419 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 165/408 (40%), Gaps = 32/408 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGD 116
RG + TY +++ G KR + F L M+ I D V + +++ L
Sbjct: 143 RGCQPNLVTYGVVVN--GLCKR-GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 199
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
VD A+N+++EM+ K P +V+Y++ + L R +A+ + +MI++ + PN T+
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 259
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ V+ GK+ EA ++ M + + PD N LI C + +M
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 319
Query: 237 LALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ ++ F +V D + H + ++ ++ + D G
Sbjct: 320 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD--GDCDN 377
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
Q + K +V+ D + IM SI LD C++ + + AL F+Y
Sbjct: 378 AQKVF------KQMVS-DGVPPDIMTYSILLDGL---------CNNGKLEKALEVFDYMQ 421
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
K ++ L+ Y +I + K ++ ++ G V +I L S R
Sbjct: 422 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 481
Query: 413 PAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTM--CR 456
A + + ED + TY LI + G + ++ + M CR
Sbjct: 482 EAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 529
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY+ +LD ++ VF+ MQ+ I +D YT+++ + AG VD
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 446
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +V+Y + L ++EA + K+M + G P+ TY L+
Sbjct: 447 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 506
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G + E+ +M+ C G+ TI L+ + + RL
Sbjct: 507 RAHLRDGDKAASAELIREMRS----------------CRFVGDASTIGLVANMLHDGRL 549
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 175/432 (40%), Gaps = 52/432 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++ W + ++R G + + +T+ + +F + + + E M+E+G D VTY
Sbjct: 230 IDQCWQVYKEMARV-GIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYN 288
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G +D A ++ M + P +VSYTA M L +V+EA ++ MI R
Sbjct: 289 TLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHR 348
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ ++ L+ + GK E+ + +M +G+ PDK C +LIE
Sbjct: 349 GLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEG---------- 398
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
Y KE R+ + E L+ F V ++TD
Sbjct: 399 -----YRKEARIVSALNLVVE-LERFGVP---------------------------ISTD 425
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I L + + ++ A SLL I + + + +IE C AL
Sbjct: 426 IYDYLMVS------ICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADAL 479
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
L ++ Y ALI L + + + ++EEM ++G + L+H
Sbjct: 480 LVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVY 539
Query: 406 GSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
R A + ++ + + +Y L+ Y A + +++ M + G P++
Sbjct: 540 CKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNI 599
Query: 464 GTFNVLLAGLEK 475
TF ++ GL K
Sbjct: 600 QTFRQMIHGLWK 611
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 199/451 (44%), Gaps = 41/451 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG N + TY T++D F + + + V+ M +G+ ++ S+++ L G +
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ ++++ V+YT + LF + A +E++ R + P+ Y V
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L GK++EA ++M+ G++PD++ N +I C+ GET + +L MK + +
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVE------------- 280
+ Y L ++ LL + V FSP ++ ++
Sbjct: 621 KPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILD 680
Query: 281 ----FVTTDIEGPLSIDQGLVLIL----LKKKNLVAIDSLL-SGIMDKSIQLDSAVISTI 331
+ + +++ L+ +L + +K V ++ +L SGI +I ++ ++
Sbjct: 681 IHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILG-- 738
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
+C D A + + +++ + L+G L + + ++ EM K+G
Sbjct: 739 ---HCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSAD 445
+L G V A +++ +P+ +TY ALI + AG
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPK----VSTYNALISDFTKAGMMT 851
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+A +++K M ++G+HP+ T+++L++G ++
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 206/465 (44%), Gaps = 41/465 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D Y T++ F A ++ + + V ++M+E G++ + TYT + + V+
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++E M +V+ +A + L + R EA +++EM + G PN TY L+
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L +AG+ +E L + +M GV D L++ K G+T + LR+ + L+
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVE-FVTTDIEGPLSID 293
+ Y V +AL DE + +L ++ + SP ++ + + FV + +D
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL-----LD 431
Query: 294 QGLVLILLKKK-----NLVAIDSLLSGIM-----DKSIQLDSAVISTIIEVN-------C 336
+ + K+ N+V +L+ G D ++++ ++ ++VN
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491
Query: 337 DHRRRDG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE-----MT 387
+ R++G A+ F+ + L+L+ Y LI L K P + +E M
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551
Query: 388 KAGHSLGVYLGAL-LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
V++ L ++ + A+ + + L P+ +TY +I + G K
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQ----STYNTMIVSHCRKGETAK 607
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
ALK+ M I P+L T+N L+AGL G V A+ E S
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 188/462 (40%), Gaps = 68/462 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +A + + V M+EK I+ + VT++SV++ G +D A M
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMM 440
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + P +V+Y + F A +VY +M+ G+ N + L+ L + GK
Sbjct: 441 KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKI 500
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR-YMKENRL--ALRYPVF 244
EEA+ +F +G+ D LI+ KAG+ T + M N L A+ Y VF
Sbjct: 501 EEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVF 560
Query: 245 KEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK- 302
L E S L ++ P D + T + + L LL
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKP------DQSTYNTMIVSHCRKGETAKALKLLHE 614
Query: 303 ------KKNLVAIDSLLSGI-----MDKSIQLDSAVIST-----------IIEVNCDHRR 340
K NL+ ++L++G+ ++K+ L + ++S +++ RR
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D L E+ + L+ + T Y L+ +L K ++EEM
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM-------------- 720
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
LGS P T T+ ALI + + D A Y M + I
Sbjct: 721 ----LGSGIAPD---------------TITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKD 500
P++ TFN LL GLE +GR+ +A + EK ++ + L+ D
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYD 803
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 97/211 (45%), Gaps = 9/211 (4%)
Query: 24 LKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEA 79
++N+ +K D T N ++ +H KA + + S + TY T++ +FG
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS-IKPNLITYNTLVAGLFGTG 638
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ KY+ M G + ++T+ V+ S + +D ++I E M + I Y
Sbjct: 639 A-VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVY 697
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+++L + ++AT V +EM+ G+ P+ T+ L+ ++ + A +++M
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 200 AGVQPDKAACNIL---IEKCCKAGETRTIIL 227
+ P+ A N L +E + GE T+++
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLI 788
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ QVL H KA + + S G D T+ ++ ++ + + + M
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGS-GIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 757
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+ I+ + T+ +++ L + G + A + EM+ P ++Y E
Sbjct: 758 QNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVE 817
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A +Y EM+ +G P TY L+ +AG +A E+F MQ+ GV P +IL+
Sbjct: 818 AMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877
Query: 215 KCCKAGETRTIILILRYMKE 234
+ + L+ MKE
Sbjct: 878 GWSRIRNGTEVKKCLKDMKE 897
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T+L RI V M++ G+ + +TY + + A+ ++ EM
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEM 825
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + +Y A + + +A +++K+M +RG+ P TY +L+ R
Sbjct: 826 VGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNG 885
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
E + M+E G P K + + K G T
Sbjct: 886 TEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMT 920
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 3/186 (1%)
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
++L+ + + + D ++T++ C + + D A + + L+ + LI
Sbjct: 121 AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHA-LDVIGWNTLIAGY 179
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCT 428
++ P + + MT G + V L+ A + A + ++ E
Sbjct: 180 CRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
ATYT I Y ++A +Y+ M R G+ + T + L+AGL + GR S+A +E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299
Query: 489 KKSIQA 494
+ A
Sbjct: 300 MDKVGA 305
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 194/434 (44%), Gaps = 37/434 (8%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D+ T+ ++ +A +FE M K + D +T+ +++ L AG V+ A +I
Sbjct: 566 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 625
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M P +V+Y A + L + R++EA +EM+ G P+ TY L+ L RA
Sbjct: 626 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 685
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM---KENRLALRY 241
+ ++AL++ S+++ G PD NIL++ K+G+T I +L M + + Y
Sbjct: 686 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTY 745
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI-- 299
++L +E L + + S + + + + ID+ LI
Sbjct: 746 NTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQE 805
Query: 300 LLKKK-----NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR--RDGALLAFEYSV 352
+++K N++ +S L G+ +S+ ++ C+ R RDG+L
Sbjct: 806 MMRKSCDVLPNIITYNSFLDGLCKQSMMAEA----------CELMRSLRDGSL------- 848
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++ + + LI L K + + ++M G+ V +L++ L +
Sbjct: 849 --RVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKME 906
Query: 413 PA-AKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A A I S++ D+ T TY+ L+ + A D+AL++ M +G P++ TFN
Sbjct: 907 RAHAMIESMV--DKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNS 964
Query: 469 LLAGLEKLGRVSDA 482
++ GL K + +A
Sbjct: 965 IIDGLCKSDQSGEA 978
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 181/427 (42%), Gaps = 35/427 (8%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ ++ + + +FE + E+G + D VTY +++ L AGD++ A + +M
Sbjct: 218 TYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 277
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP--PNCYTYTVLMEYLVRAG 185
+ C P +V+Y+ + L R+ EA ++ +EM ++ PN TY ++ L +
Sbjct: 278 SSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQS 337
Query: 186 KYEEALEIFSKMQEAG--VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
EA E+ +++ V PD + LI+ CK G+ + M
Sbjct: 338 MTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVIT 397
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + AD+ + + H E + D V T S+ LV K
Sbjct: 398 YNALVNGLCKADK----MERAHAMI--ESMVDKGVTPDVIT-----YSV---LVDAFCKA 443
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF-EYSVKMDLNLERTA 362
+ LL G+ + + ++II+ C R A F + ++K L ++
Sbjct: 444 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKIT 503
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKIFS-- 419
Y LI L + + +++ M ++ + L +LG R A ++++
Sbjct: 504 YCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGL--SKLGDVSR---ALQVYNRM 558
Query: 420 ----LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
L+P+ T+ LI AG+ ++A +++ M K + P + TF L+ GL K
Sbjct: 559 LELELVPD----KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 614
Query: 476 LGRVSDA 482
G+V A
Sbjct: 615 AGQVEAA 621
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 200/491 (40%), Gaps = 40/491 (8%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N + K++ LF V R G + D TY T++D +A + + + M +
Sbjct: 223 INGLCKSNELGAGMELFEELVER--GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC--YPTIVSYTAYMKILFLNDRVK 153
+ VTY+ +++ L G +D A + +EM K C P I++Y +++ L
Sbjct: 281 SCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 340
Query: 154 EATDVYKEMIQRGL--PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
EA ++ + + L P+ T++ L++ L + G+ +EA +F M G P+ N
Sbjct: 341 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 400
Query: 212 LIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQ- 267
L+ CKA + ++ M + + + Y V +A DE LL + +
Sbjct: 401 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 460
Query: 268 FSPEFISDNDAVE-FVTTDIEGP-------LSIDQGLV--------LI--LLKKKNLVAI 309
+P ++ N ++ +D G +++ GLV LI L +
Sbjct: 461 CTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQA 520
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
++LL + D + I+ + ++ D R AL + ++++L ++ + LI
Sbjct: 521 EALLDAMPDPDTYAFNCCINGLSKLG-DVSR---ALQVYNRMLELELVPDKVTFNILIAG 576
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-----PED 424
K F + + + EEM V LI L A + A I L+ P +
Sbjct: 577 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 636
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY AL+ +G ++A + + M G P T+ L+ L + R DA
Sbjct: 637 ---VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 693
Query: 485 YRKEKKSIQAD 495
E KS D
Sbjct: 694 LVSELKSFGWD 704
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 203/493 (41%), Gaps = 44/493 (8%)
Query: 22 DLLKNLPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+ NL + + T N + L +E+A F + S G D TY +++
Sbjct: 626 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS-GCVPDSITYGSLVYALCR 684
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A R + ++ G + D VTY ++ L +G + A+ + EEM K +P +V+
Sbjct: 685 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT 744
Query: 139 YTAYMKILFLNDRVKEATDVYKEM---IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
Y + L ++EA ++ +M + R PN TY+VL+ L + G+ +EA E+
Sbjct: 745 YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ 804
Query: 196 KM--QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-----ALRYPVFKEAL 248
+M + V P+ N ++ CK ++R +++ L + + + L
Sbjct: 805 EMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 864
Query: 249 QTFKVADENDSLLWQ-VHPQFSPEFISDN---------DAVEFVTTDIEGPLSIDQG--- 295
DE ++ + + P ++ N D +E IE +D+G
Sbjct: 865 CKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIES--MVDKGVTP 922
Query: 296 -------LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
LV K ++ LL G+ + + ++II+ C + A F
Sbjct: 923 DVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMF 982
Query: 349 -EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLG 406
+ ++K L ++ Y LI L + + +++ M ++ + L +LG
Sbjct: 983 DDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGL--SKLG 1040
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
R + L+P+ T+ LI AG+ ++A +++ M K + P + TF
Sbjct: 1041 DVSRALHRMLELELVPD----KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 1096
Query: 467 NVLLAGLEKLGRV 479
L+ GL K G+V
Sbjct: 1097 GALIDGLCKAGQV 1109
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 118/526 (22%), Positives = 207/526 (39%), Gaps = 49/526 (9%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTM 72
++ W +A K+ ++ Y +N ++K+ P + LF + + NH FTY+T+
Sbjct: 96 QFYDWAAALPGFKHTIFSFNKY-LNLLVKSGSPAKAIDLFRSRLPPRCRPNH--FTYSTL 152
Query: 73 LDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE-EMKLKE 131
L +A F + + + Y V+ L AG+ A+ I+ EM
Sbjct: 153 LRATYKAGGDVERTLGF-FRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDG 211
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
PTIV+Y + L ++ + ++++E+++RG P+ TY L++ L +AG EEA
Sbjct: 212 VAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEAR 271
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLA--LRYPVFKE 246
+ M P+ ++LI CK G E R +I + + L + Y F +
Sbjct: 272 RLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 331
Query: 247 ALQTFKVADENDSLLWQVHP---QFSPEFISDNDAVEFVTTDIEGPLSIDQ--------- 294
L + E L+ + + SP D V F +T I+G Q
Sbjct: 332 GLCKQSMTAEACELMRSLRDGSLRVSP------DTVTF-STLIDGLCKCGQIDEACSVFD 384
Query: 295 ---------------GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
LV L K + +++ ++DK + D S +++ C
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 444
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT-KAGHSLGVYLG 398
R D AL + ++I L K + + ++ ++M K G
Sbjct: 445 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITY 504
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
LI L R A + +P+ T + I G +AL++Y M
Sbjct: 505 CTLIDGLFRTGRAGQAEALLDAMPDPD--TYAFNCCINGLSKLGDVSRALQVYNRMLELE 562
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALSKDAV 502
+ P TFN+L+AG K G A +E K++Q D ++ A+
Sbjct: 563 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 608
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A+ F+ ++ G D+ TY T++D + + + M + D +
Sbjct: 977 EAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDP----DTYAFNCC 1032
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
++ LS GDV A++ E++L P V++ + ++A+ +++EM+ + L
Sbjct: 1033 INGLSKLGDVSRALHRMLELEL---VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 1089
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIF 194
P+ T+ L++ L +AG+ E +I
Sbjct: 1090 QPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 199/485 (41%), Gaps = 69/485 (14%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D YT +++ F + I V E M + I ++ TY +++H L GD++ A
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKA 391
Query: 121 VNIWEEMKLKECYPTIVSYT------------------------------AYMKILFLND 150
+++ EM + P I +Y AYM +N
Sbjct: 392 EDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNG 451
Query: 151 -----RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ A ++++EMI GL PN YT +++ LV+ G++EEA++I M++ G+ PD
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511
Query: 206 KAACNILIEKCCKAGE-----TRTIILILRYMKENRLALRYPVFKEA-LQTFKVADENDS 259
N +I CKAG+ + + +I + +K N Y F + ++ S
Sbjct: 512 VFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPN--VYTYGAFIHGYCRAGEMQAAERS 569
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS-------IDQGL--------VLI--LLK 302
+ + +P + D ++ D + +DQG+ VLI L K
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
L + S ++DK + D +++I C A + K +N
Sbjct: 630 NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVT 689
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL- 421
Y ALI L KL K E+ + + + G + + +I + A ++F +
Sbjct: 690 YNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMK 749
Query: 422 ----PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
P D + Y ALI AG+ +KAL ++ M +GI S FN L+ G KLG
Sbjct: 750 LVGVPPD---SFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLG 805
Query: 478 RVSDA 482
++ +A
Sbjct: 806 KLIEA 810
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 174/420 (41%), Gaps = 59/420 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D T++ ++ + ++ VF + +KG+ D TYTS++ L GD+
Sbjct: 611 QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKA 670
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + ++M K P IV+Y A + L + +A +++ + ++GL N TY+ ++
Sbjct: 671 AFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIA 730
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++ EA ++F M+ GV PD LI+ CCKAG T + + M E +A
Sbjct: 731 GYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA- 789
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
P F + F K+ + + V +P ++ +E+ T G + +
Sbjct: 790 STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCT--VGNIKEAEQ 847
Query: 296 LVLILLKKK---NLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNC 336
L + + K+ N++ SLL G ++ + I+ D S +++ +
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
AL + + +N+ + Y LI L K N +V ++++E+ K G L +
Sbjct: 908 KEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSL- 966
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
AT L+ + AG D+AL++ ++M R
Sbjct: 967 --------------------------------ATCGTLVCCFHRAGRTDEALRVLESMVR 994
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 114/518 (22%), Positives = 202/518 (38%), Gaps = 61/518 (11%)
Query: 8 VYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRG 61
++ + K + A+DL + IK D T N +++ + MEKA+ + +
Sbjct: 379 IHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKEN- 437
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ + +++ ++ +F+ M G+ + V YT+++ L G + A+
Sbjct: 438 LTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAI 497
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
I MK + P + Y + +++E EMI +GL PN YTY +
Sbjct: 498 KILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGY 557
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM--------- 232
RAG+ + A F +M ++G+ P+ C LI+ CK G T R M
Sbjct: 558 CRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDV 617
Query: 233 -----------KENRLALRYPVFKEALQTFKVAD-------------END-SLLWQVHPQ 267
K +L VF E L V D E D +++H
Sbjct: 618 QTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDD 677
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+ I+ N VT + L+ L K + L GI +K + +S
Sbjct: 678 MCKKGINPN----IVTYN---------ALINGLCKLGEIAKARELFDGIPEKGLARNSVT 724
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
STII C A F + + + Y ALI K K + M
Sbjct: 725 YSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMV 784
Query: 388 KAGHSLGVYLGALL--IHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGS 443
+ G + AL+ +LG + + A ++ + ++ TYT LI + + G+
Sbjct: 785 EEGIASTPAFNALIDGFFKLG---KLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGN 841
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+A +++ M ++ + P++ T+ LL G ++GR S+
Sbjct: 842 IKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSE 879
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 209/523 (39%), Gaps = 65/523 (12%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKN--LPIKWDSYTVNQVLKTHPPMEKAWL--FFNWVSR 58
+T+ + +LK W Q L+++ LP K + V V+K + ++ L FFNWV+
Sbjct: 43 NTVKEITSLLKQKNW---QFLIESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNS 99
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE----------------KGIN---- 98
F+ + T++ + I + + V E M + K IN
Sbjct: 100 RTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSS 159
Query: 99 -IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
V + ++ G ++ AV+++ K E + + K L +RV+
Sbjct: 160 SSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWK 219
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
VYK M+ + P+ YTYT L+ R GK EE + M+E G P+ +++I C
Sbjct: 220 VYKGMLG-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLC 278
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQ-FSPEFI 273
+AG+ + + R M L ++ + F K + E S+L +++ P+ +
Sbjct: 279 RAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHV 338
Query: 274 SDNDAVE-FV-TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ + FV +DI G + K+ + A + I+L++ +
Sbjct: 339 AYTALINGFVKQSDIGGAFQV----------KEEMFA----------RKIKLNTFTYYAL 378
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I C + A F M + + Y LI K+ K E++ E+ K
Sbjct: 379 IHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENL 438
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSAD 445
+ Y+ +++ L A ++F L P YT ++ G +
Sbjct: 439 TANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPN----IVIYTTIVKGLVKEGRFE 494
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+A+KI M +G+ P + +N ++ G K G++ + + Y E
Sbjct: 495 EAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVE 537
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
Query: 63 NH---DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
NH + TYT +++ I + +F MQ++ + + +TYTS++H + G
Sbjct: 820 NHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSE 879
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
++++EM + P ++++ + +A + +M+ G+ YT+L++
Sbjct: 880 MFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILID 939
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC--KAGETRTIILILRYMKENRL 237
L + E L++ ++++ G + A C L+ CC +AG T + +L M + L
Sbjct: 940 ALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLV--CCFHRAGRTDEALRVLESMVRSFL 997
Query: 238 AL 239
L
Sbjct: 998 NL 999
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 171/419 (40%), Gaps = 24/419 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ T+++ +I +F M G + ++Y +V++ L G+ A
Sbjct: 161 GIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMA 220
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++ +M+ P +V+Y + L + V EA + EM+ RG+PP+ TY ++
Sbjct: 221 VRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHG 280
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRL 237
G+ EA +F +M V PD NIL++ CK G E R + +
Sbjct: 281 FCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPN 340
Query: 238 ALRYPVFKEALQTFKVADENDSLLW-QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
A Y + DE +L + +P S N L
Sbjct: 341 AYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI------------------L 382
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ K K + LLS + +K++ D+ ST+++ C R AL F+ L
Sbjct: 383 INGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGL 442
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ AY L+ K + ++++EM + + L +LI + A + A +
Sbjct: 443 LPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKE 502
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+FS L D + TY +I G +D+A + ++ M G P ++NV++ G
Sbjct: 503 LFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGF 561
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 6/213 (2%)
Query: 29 IKWDSYTVNQVLKTHPPM----EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
I D T N +L + E LF V R+ D T+ ++D + +S
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN--VMPDTVTFNILVDGLCKEGMVSE 324
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+ V E M EKG +A TY ++M +D A+ + M K C P + SY +
Sbjct: 325 ARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILIN 384
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+ R+ EA + EM ++ L P+ TY+ LM+ L + G+ EAL +F +M +G+ P
Sbjct: 385 GYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLP 444
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
D A +IL++ CK G + +L+ M E R+
Sbjct: 445 DLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 179/447 (40%), Gaps = 64/447 (14%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G H+ ++ +++ + V M + GI DA+T+ ++++ L N G + A
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEA 185
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++ EM P ++SY + L N A V+++M Q PN TY +++
Sbjct: 186 VGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDS 245
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + EA+E S+M + G+ PD N ++ C G+
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ------------------- 286
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
EA + FK E + N + VT +I + GL
Sbjct: 287 ---LNEATRLFK------------------EMVGRNVMPDTVTFNI-----LVDGLC--- 317
Query: 301 LKKKNLVAIDSLLSGIM-DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K+ +V+ +S M +K + ++ + +++ C H + D A+ +
Sbjct: 318 --KEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
++Y LI K + ++ EM++ + + L+ L RP A +F
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
LLP+ Y+ L+ + G D+ALK+ K M + I P++ + +L+ G+
Sbjct: 436 EMCSSGLLPD----LMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGM 491
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKD 500
G++ E+ ++ + AD + D
Sbjct: 492 FIAGKL---EVAKELFSKLSADGIRPD 515
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 122/254 (48%), Gaps = 4/254 (1%)
Query: 32 DSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
++YT N ++ H M++A + +G + +Y +++ + ++KR++ K +
Sbjct: 340 NAYTYNALMDGYCLHNQMDEAIKVLG-IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
M EK + D VTY+++M L G A+N+++EM P +++Y+ +
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCK 458
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ + EA + KEM +R + PN YT+L+ + AGK E A E+FSK+ G++PD
Sbjct: 459 HGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWT 518
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
N++I+ K G + R M+++ + +Q F ++ + + +
Sbjct: 519 YNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMV 578
Query: 269 SPEFISDNDAVEFV 282
F +D+ + +
Sbjct: 579 GKRFSADSSTFQML 592
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 96/184 (52%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY+T++ + R +F+ M G+ D + Y+ ++ G +D A+ +
Sbjct: 410 DTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLL 469
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM + P I+ YT ++ +F+ +++ A +++ ++ G+ P+ +TY V+++ L++
Sbjct: 470 KEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKE 529
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G +EA E F KM++ G PD + N++I+ + ++ T I ++ M R + F
Sbjct: 530 GLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589
Query: 245 KEAL 248
+ L
Sbjct: 590 QMLL 593
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 156/375 (41%), Gaps = 24/375 (6%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV++ +M L + S + L V A V +M + G+ P+ T+ L+
Sbjct: 115 AVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLIN 174
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR--- 236
L GK +EA+ +F++M +G +P+ + N +I CK G T + + R M++NR
Sbjct: 175 GLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKP 234
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y ++L ++ +E L + V P+ ++ N T + G S+ Q
Sbjct: 235 NVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYN-------TILHGFCSLGQ- 286
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L L ++ +++ D+ + +++ C A E +
Sbjct: 287 ----------LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKG 336
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
Y AL+ N + +++ M G + + +LI+ ++R A
Sbjct: 337 AEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAK 396
Query: 416 KIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++ S + E T TY+ L+ G +AL ++K MC G+ P L +++LL G
Sbjct: 397 RLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGF 456
Query: 474 EKLGRVSDAEIYRKE 488
K G + +A KE
Sbjct: 457 CKHGHLDEALKLLKE 471
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 3/211 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY T+L F +++ +F+ M + + D VT+ ++ L G V
Sbjct: 265 RGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSE 324
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + E M K P +Y A M L++++ EA V MI +G PN +Y +L+
Sbjct: 325 ARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILIN 384
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
++ + EA + S+M E + PD + L++ C+ G R + + + M + L
Sbjct: 385 GYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLP 444
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+ Y + + DE LL ++H +
Sbjct: 445 DLMAYSILLDGFCKHGHLDEALKLLKEMHER 475
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +TY ++D + ++ V +M KG + +Y +++ + ++
Sbjct: 335 KGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNE 394
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + EM K P V+Y+ M+ L R +EA +++KEM GL P+ Y++L++
Sbjct: 395 AKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLD 454
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ G +EAL++ +M E ++P+ ILI AG+
Sbjct: 455 GFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 70/156 (44%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D Y+ +LD F + + + + M E+ I + + YT ++ + AG ++
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLE 498
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ ++ P I +Y +K L EA + +++M G P+ +Y V++
Sbjct: 499 VAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVII 558
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ ++ A+++ +M D + +L++
Sbjct: 559 QGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 185/456 (40%), Gaps = 93/456 (20%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N + KT +E+A L F+ V RG N + TYT ++D FG ++ Y F M E
Sbjct: 372 INSLCKT-GKLEEAELLFS-VMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIEC 429
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
GI+ +Y S+++ G + A +++EM K PT+ +YT+ + + V +A
Sbjct: 430 GISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKA 489
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+Y EM +G+ PN T+T L+ L + K EA ++F +M E + P++ N+LIE
Sbjct: 490 FKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEG 549
Query: 216 CCKAGETRTIILILRYMKENRLA----LRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
C+ G T +L M + L+ P+ T +V++ + E
Sbjct: 550 HCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSE-------------AKE 596
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
FI+D + K +LD + +
Sbjct: 597 FIND----------------------------------------LHHKHQRLDELCYTAL 616
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ C R AL+A + V L ++ +Y LI + N I+ E+ + H
Sbjct: 617 LQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-----RILFELLREMH 671
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
G+ Q YT LI + +G+ KA + +
Sbjct: 672 GKGM-----------------------------QPDNVIYTILIDGFIKSGNLKKAFEFW 702
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
M +G P+ T+ L+ GL K G V++A++ K
Sbjct: 703 YIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFK 738
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 175/424 (41%), Gaps = 28/424 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T + +L+ ++ + +F+ + G+ D YT V+ L D + A I +
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQA 251
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C +IV+Y ++ L + RV EA +V + + ++GL + TY L+ L R ++
Sbjct: 252 EGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEF 311
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
E +E+ +M E G P +AA + LIE K G +L + + + V+
Sbjct: 312 EVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSM 371
Query: 248 LQTFKVAD--ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+ + E LL+ V + ++ ND + D G ++
Sbjct: 372 INSLCKTGKLEEAELLFSV---MAERGLNPNDVTYTILIDGFG-------------RRAK 415
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
L + +++ I +++I C + A L F+ V L Y +
Sbjct: 416 LDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTS 475
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------S 419
LI K PK ++ EMT G + LI L + A+K+F
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+LP + TY LI + G+ +A ++ M +KG+ P T+ L+AGL GRV
Sbjct: 536 ILPNE----VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRV 591
Query: 480 SDAE 483
S+A+
Sbjct: 592 SEAK 595
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 185/462 (40%), Gaps = 51/462 (11%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTML------DIFGEAKRISS------------MKYVFE 90
A FFN++ R F+H ++ ++ ++F A + + FE
Sbjct: 86 ALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFE 145
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGA--VNIWEEMKLKECYPTIVSYTAYMKILFL 148
++ + + + H++ N +DG VN+ + L P + + +A + L
Sbjct: 146 SYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGL---LPEVRTLSALLNALAR 202
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ ++ +++ ++ G+ P+CY YTV+++ L + +A EI ++ + G
Sbjct: 203 IRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVT 262
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL---QTFKVADENDSLLW 262
N+ I CK+ + + R + E L + Y L Q F+V E
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGME------ 316
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
++ +E E +S GL+ L+K ++ LL+ + +
Sbjct: 317 -----------MMDEMIELGYVPSEAAVS---GLIEGLIKMGSIEGAFELLNKVGKLGVV 362
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+ V +++I C + + A L F + LN Y LI +
Sbjct: 363 PNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYY 422
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFS 440
+M + G S VY +I+ + A +F + + + ATYT+LI Y
Sbjct: 423 FNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCK 482
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G KA K+Y M KGI P+ TF L+ GL ++ ++++A
Sbjct: 483 DGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEA 524
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA+ F+ ++ G+ + TYT +++ +A ++ K +F+ M + +TY
Sbjct: 695 LKKAFEFW-YIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYG 753
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ L+ G+++ A+ + M L+ + V+Y ++ + +EA + MI
Sbjct: 754 CFLDHLTKEGNMENALQLHNAM-LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGI 812
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
G+ P+C TY+ + + G + A++++ M + G++PD+ N LI CC GE
Sbjct: 813 GMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGE 868
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 201/495 (40%), Gaps = 27/495 (5%)
Query: 10 KILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPME---KAWLFFNWVSRSRGFNHDR 66
+I K+ D L N +K D Y V+K ++ KA N + G +
Sbjct: 202 RIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQ-AEGNGCSLSI 260
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY ++ ++KR+ V + EKG+ D VTY +++ L + + + + +E
Sbjct: 261 VTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDE 320
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M P+ + + ++ L ++ A ++ ++ + G+ PN + Y ++ L + GK
Sbjct: 321 MIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGK 380
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEA +FS M E G+ P+ ILI+ G R L + + N++ E
Sbjct: 381 LEEAELLFSVMAERGLNPNDVTYTILID-----GFGRRAKLDVAFYYFNKMI-------E 428
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ V N + Q +F +++ E V ++ ++ L+ K +
Sbjct: 429 CGISATVYSYNSMINCQC--KFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLV 486
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
L + K I ++ + +I C + A F+ V++ + Y L
Sbjct: 487 PKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVL 546
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--- 423
I + + E+++EM K G S Y LI L S R A + + L
Sbjct: 547 IEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQ 606
Query: 424 --DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG-LEKLGRVS 480
D+ C YTAL+ + G +AL + M +G+ L ++ VL++G L + R+
Sbjct: 607 RLDELC---YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRIL 663
Query: 481 DAEIYRKEKKSIQAD 495
+ K +Q D
Sbjct: 664 FELLREMHGKGMQPD 678
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 59 SRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNA 114
RG D +Y ++ + RI +FEL++E KG+ D V YT ++ +
Sbjct: 638 GRGLQMDLVSYAVLISGALNQNDRI-----LFELLREMHGKGMQPDNVIYTILIDGFIKS 692
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G++ A W M + P V+YTA + LF V EA ++K M+ PN TY
Sbjct: 693 GNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITY 752
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+++L + G E AL++ + M + G + NILI C+ G+
Sbjct: 753 GCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGK 798
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 1/174 (0%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D YT +L F + RI + M +G+ +D V+Y ++ N D +
Sbjct: 609 DELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELL 667
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM K P V YT + + +K+A + + MI G PN TYT L+ L +A
Sbjct: 668 REMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKA 727
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G EA +F +M P+ ++ K G + + M + A
Sbjct: 728 GYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFA 781
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ + + + + ++M G+ D +TY++ ++ G+VD A+++WE M
Sbjct: 785 TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECM 844
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ P V + + LN + A + +M+ RGL P TY LM L + +
Sbjct: 845 LQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRAR 903
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 130/342 (38%), Gaps = 51/342 (14%)
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
N RV + V M GL P T + L+ L R K+ + LE+F + AGV+PD
Sbjct: 168 NKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYI 227
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
++++ C+ + F +A + A+ N
Sbjct: 228 YTVVVKCLCELKD----------------------FNKAKEIINQAEGNGC--------- 256
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
++ VT ++ + L K K + + + +K ++ D
Sbjct: 257 ---------SLSIVTYNV---------FINGLCKSKRVWEAVEVKRSLGEKGLKADLVTY 298
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
T++ C + + + + +++ A LI LIK+ + E++ ++ K
Sbjct: 299 CTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGK 358
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADK 446
G +++ +I+ L + A +FS++ E TYT LI + D
Sbjct: 359 LGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDV 418
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
A + M GI ++ ++N ++ K G++ AE+ KE
Sbjct: 419 AFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKE 460
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 174/435 (40%), Gaps = 70/435 (16%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++D + + R+ + VFE M +G + TY VM L G VD A E M
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P +VSY + LF + KEA V +MIQ G+PP+ TY LM + +++
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409
Query: 189 EALEIFSKMQEAGVQPDK---------------------------------AAC---NIL 212
+A+ I M +AGV PD +AC N +
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 469
Query: 213 IEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
I++ CK G + +L++ +M + + + Y +F + L DE SLL
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL-------- 521
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD-KSIQLDSAVI 328
E + D V + T +++ L K + L L ++ K + + S
Sbjct: 522 SEMDTLRDEVSYTT------------VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTF 569
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ +I+ +R D AL E V+ + Y +I L KL+ K E+ +EM
Sbjct: 570 NLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAV 629
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP------EDQKCTATYTALIGVYFSAG 442
G +LI+ L R A ++ + +D KC Y AL G G
Sbjct: 630 RGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRG----QG 685
Query: 443 SADKALKIYKTMCRK 457
++A ++ + M K
Sbjct: 686 RGEEAAELLRRMTTK 700
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 162/423 (38%), Gaps = 85/423 (20%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R D FTY ++D +A + + M ++G+ D VT+ S+M L AG +
Sbjct: 4 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 63
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ M + C P+ +Y + L V A + E + G P+ TY++L +
Sbjct: 64 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILAD 123
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + G+ +EA E+ +M G P+ N LI+ CKA +T
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAY------------- 170
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
E L+T V F P+ ++ T ++G
Sbjct: 171 ------ELLETL------------VSSGFVPDVVT-------YTIIVDG----------- 194
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K+ L ++ G++ + + ++E C R D A F+ V D +
Sbjct: 195 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 254
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
AY++L+ K + + ++V+ + R P +
Sbjct: 255 ALAYVSLVNGYCKSSRTKEAQKVVDGI-----------------------RGTPYIDV-- 289
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
Y AL+ Y G D+ +++ M +G P++ T+N+++ GL K G+V
Sbjct: 290 -----------YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 338
Query: 480 SDA 482
+A
Sbjct: 339 DEA 341
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 177/463 (38%), Gaps = 70/463 (15%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAG 115
S GF D TY+ + D + RI FEL++E G + VTY +++ L A
Sbjct: 108 SSGFVPDVVTYSILADGLCKRGRIDE---AFELVKEMSGNGCTPNLVTYNTLIDGLCKAS 164
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A + E + P +V+YT + L R+ +A + + M++RG P+ TYT
Sbjct: 165 KTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYT 224
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI---------- 225
LME L R G+ +EA IF +M D A L+ CK+ T+
Sbjct: 225 ALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT 284
Query: 226 -------ILILRYMKENRLALRYPVFKEA--------LQTFKVADENDSLLWQVHPQFSP 270
L+ Y KE RL VF++ ++T+ + + +V F
Sbjct: 285 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP- 343
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
F+ + V + + ID L K +L ++ I D+ +T
Sbjct: 344 -FLESMHSAGCVPDVVSYNIIIDG-----LFKASKPKEARQVLDQMIQAGIPPDAVTYNT 397
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
++ C R D A+ + +K ++ + Y LI L + N E++ EM + G
Sbjct: 398 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+ CT TY +I G +AL +
Sbjct: 458 CVVSA-------------------------------CT-TYNTIIDRLCKEGCLKQALLL 485
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
M G+ + T+N+ + L K GR+ +A E +++
Sbjct: 486 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR 528
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 64 HDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D +YTT++ +A+++ + K E++ KG+ I + T+ ++ + +D A+
Sbjct: 528 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 587
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ E M + C P++++Y + L D+V +A +++ EM RG+ + +YTVL+ L
Sbjct: 588 LLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLC 647
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
G+ +EAL++ +M + + D C L
Sbjct: 648 GQGRGKEALQVLEEMASSDCEIDDLKCRKL 677
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 8/220 (3%)
Query: 17 WDSAQDLLKNLPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
++ ++L+N + T N + L +++A L + ++ G + TY +
Sbjct: 447 YELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT-GHGVEANTVTYNIFI 505
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKEC 132
D + R+ L+ E D V+YT+V+ L A +D A + EM +K
Sbjct: 506 DRLCKEGRLDEAS---SLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 562
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
T ++ + R+ EA + + M+QRG P+ TY +++ L + K ++A E
Sbjct: 563 CITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWE 622
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+F +M G+ + +LI C G + + +L M
Sbjct: 623 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 662
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 12/196 (6%)
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
SLL+ + +++ + +T+I C + D A + V + Y L L
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL------PED 424
K + E+V+EM+ G + + LI L A + A ++ L P+
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD- 184
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TYT ++ G DKALK+ + M ++G PS+ T+ L+ GL + GRV +A
Sbjct: 185 ---VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241
Query: 485 YRKE--KKSIQADALS 498
KE K ADAL+
Sbjct: 242 IFKEMVSKDCTADALA 257
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/490 (21%), Positives = 186/490 (37%), Gaps = 87/490 (17%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V +V+ P AW F W + F H+RFT +L ++ +A+R+ F+ +
Sbjct: 72 VGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKN 131
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK------------------------- 130
D V+Y ++M+ AGDV A+ ++ EMK
Sbjct: 132 VFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAW 191
Query: 131 ECY--------PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
E + P ++SYT + L + +V +A ++K+M+ + + P+ TY L++ L
Sbjct: 192 EVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLG 251
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ + +EA ++F + + G P N +I+ CK G EN L L
Sbjct: 252 KQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRI-----------ENALTLYDD 300
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+ +E P P+ + + + + G + +
Sbjct: 301 MVRE-------------------PHLKPDMFTYSALINGLNLSNRGEKAYE--------- 332
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF-EYSVKMDLNLERT 361
L ++D D +T+++ C D A+ F + V +
Sbjct: 333 ---------LYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVI 383
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSL--GVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI K++ ++ +EM G SL +I +L R A ++F
Sbjct: 384 TYTVLIDRFCKVDRLGDAVKLAKEM--EGRSLLPDAVTFTTVIQKLCKESRIDEAHELFE 441
Query: 420 LLPEDQKCTAT-YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ + K + + ++ Y D A K++ M G P+L T+ L+ G + GR
Sbjct: 442 SIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGR 501
Query: 479 VSDAEIYRKE 488
SDA I E
Sbjct: 502 YSDALIMYHE 511
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 17 WDSAQDLLKNLPIKWDSYTV--NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
W+ +D+ SYT+ + + K+ + LF V ++ D TY ++D
Sbjct: 191 WEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKA--IYPDVVTYGALID 248
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECY 133
G+ +R+ +FE + KG + VTY +++ L G ++ A+ ++++M +
Sbjct: 249 GLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLK 308
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P + +Y+A + L L++R ++A ++Y+EM+ G P+ TY L++ L ++G ++A+EI
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368
Query: 194 FSKMQEAGV-QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
F KM V P+ +LI++ CK + + + M+ L F +Q
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQ 425
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
+KA F + + + TYT ++D F + R+ + + M+ + + DAVT+T+
Sbjct: 363 DKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTT 422
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
V+ L +D A ++E + K C P V + + R+ +A ++ M+ G
Sbjct: 423 VIQKLCKESRIDEAHELFESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSG 481
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
P TYT L+ R G+Y +AL ++ +M E G P++
Sbjct: 482 CAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPER 521
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 148/363 (40%), Gaps = 46/363 (12%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q N +T L+ V+A + E+A F + +PD+ + N L+ KAG+ +
Sbjct: 95 QSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVK 154
Query: 224 TIILILRYMKENRLAL---RYPVFKEALQTFKVADENDSLLWQVHPQ----FSPEFISDN 276
+ + MK++ +A+ V + K+ S+ W+V FSP IS
Sbjct: 155 KALALFGEMKDSGIAVLRSHNIVLRGLCSGGKI-----SMAWEVFKDMSGIFSPNLIS-- 207
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
T I+G L K + + +L ++DK+I D +I+
Sbjct: 208 -----YTIMIDG-----------LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLG 251
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH-SLGV 395
RR A FE + + Y +I L K + ++M + H +
Sbjct: 252 KQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDM 311
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCT---ATYTALIGVYFSAGSADKALKI 450
+ + LI+ L + R K + L E D C+ TY L+ +G DKA++I
Sbjct: 312 FTYSALINGLNLSNR---GEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368
Query: 451 YKTMCRKGI-HPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME---E 506
++ M + P++ T+ VL+ K+ R+ DA K K ++ +L DAV +
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAV---KLAKEMEGRSLLPDAVTFTTVIQ 425
Query: 507 KIC 509
K+C
Sbjct: 426 KLC 428
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 196/490 (40%), Gaps = 32/490 (6%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYT 70
+Y D+A+ L+ ++P+ D+YT +++ + + RG TYT
Sbjct: 121 RYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYT 180
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L+ ++ V + M+ KG + VTY +++ + G VD A I +
Sbjct: 181 VLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY 240
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P IVSYT +K L R + ++ EM+ + PN T+ +L+ + R G E A
Sbjct: 241 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 300
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+++ +M + G P+ CNI+I CK G L M + L+
Sbjct: 301 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 360
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV-----LILLKKK- 304
A W+ + PE + N VT + + +GL+ LI L +
Sbjct: 361 LCRAGR-----WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEY 415
Query: 305 ----NLVAIDSLLSGI-----MDKSIQL--------DSAVISTIIEVNCDHRRRDGALLA 347
+V ++L+ G +D +++L ++ +T++ C R D A
Sbjct: 416 GCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAEL 475
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
++ D L + L+ + + E+V +M + G + + L+ +
Sbjct: 476 LAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 535
Query: 408 ARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
A ++ L T TY++++ V ++A+++ + G+ P +G
Sbjct: 536 DCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGM 595
Query: 466 FNVLLAGLEK 475
+N +L L K
Sbjct: 596 YNKILFALCK 605
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 170/436 (38%), Gaps = 24/436 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF D +YTT+L A+R +K +F M +K + VT+ ++ + G V+
Sbjct: 239 SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 298
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + ++M C P + + RV +A D M G P+ +YT ++
Sbjct: 299 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 358
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L RAG++E A E+ +M P++ N I C+ G I ++ M E +
Sbjct: 359 RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCS 418
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ + + F V DS L + + + + + T L+
Sbjct: 419 VGIVTYNALVHGFCVQGRVDSAL-----ELFNNLPCEPNTITYTT------------LLT 461
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L + L A LL+G++ K L++ + ++ C + A+ ++
Sbjct: 462 GLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 521
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ L+ + K + E++ + G SL + ++ L R A ++
Sbjct: 522 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 581
Query: 419 SLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ + + Y ++ D+A+ + M G P+ T+ +L+ GL
Sbjct: 582 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 641
Query: 477 GRVSDA-----EIYRK 487
G + +A E+Y K
Sbjct: 642 GLLKEARYVLSELYAK 657
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE- 483
Q TYT L+ + +A+ + M KG P++ T+NV++ G+ + GRV DA+
Sbjct: 173 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 232
Query: 484 -IYRKEKKSIQADALSKDAV 502
+ R Q D +S V
Sbjct: 233 ILNRLSSYGFQPDIVSYTTV 252
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 176/406 (43%), Gaps = 49/406 (12%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+ +V++ L G +D A +++EMK P + SY+ + RV +A++V+KEM
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G+ PN Y+Y++L++ + G+ ++ALE+F +M+ +G+ PD + +ILI+ C+ G+
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402
Query: 224 TIILILRYMKENRL---ALRY----------PVFKEALQTFKVADENDSLLWQVHPQFSP 270
+ I M N A Y F AL+ F++ + +W P
Sbjct: 403 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLG--MW-------P 453
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ I+ N ++ I +K + +L + + + +
Sbjct: 454 DTIACNH------------------ILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNE 495
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
I C + AL +K ++ + Y LI K K + +MTK G
Sbjct: 496 FIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVG 555
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSAD 445
+ V +LI+ S + A ++F + E DQ YT+L+ + + G
Sbjct: 556 ITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQ---IAYTSLVAGFCNTGEMT 612
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKK 490
+A ++ M R+G P++ T+ + KL + + A ++Y K K+
Sbjct: 613 RARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKE 658
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 176/426 (41%), Gaps = 24/426 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D ++Y+ ++D F R+ VF+ M+ GI + +Y+ ++ G V
Sbjct: 307 KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRV 366
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ ++EEMK P + SY+ + + A ++EM P+ + Y L
Sbjct: 367 DKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSL 426
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ ++ ++ AL+ F MQ+ G+ PD ACN ++ C+ + + + +EN +
Sbjct: 427 IKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGV 486
Query: 238 AL-------------RYPVFKEALQTFKVADENDSLLWQVH-----PQFSPEFISDNDAV 279
R V ++ALQ V + + L V+ F+ S+ +
Sbjct: 487 HFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVM 546
Query: 280 EFV-TTDIEGPLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
F+ T + ++ +LI + + L G+ + + D ++++ C
Sbjct: 547 LFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFC 606
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ A F+ + + Y I +KLN + ++ E+M + G
Sbjct: 607 NTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQI 666
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKT 453
L +LI + A +F + ++ +CT YT LI Y D+A K+Y+
Sbjct: 667 LYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEE 726
Query: 454 MCRKGI 459
M KG+
Sbjct: 727 MRAKGL 732
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR----AGKYEEA 190
I+S +K L ++RV +++ +I+ G PN +TYT++M + R + A
Sbjct: 170 NIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRA 229
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
EI K+ +G P+ I+ CK G
Sbjct: 230 SEILGKIYMSGETPNVVTYGTYIKGLCKVG 259
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 19/231 (8%)
Query: 275 DNDAVEFVTT--DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+ DA E V+ D+E + L+ + L + + D I+L+ + ++
Sbjct: 119 NRDAGELVSLLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLL 178
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK----LNTFPKVAEIVEEMTK 388
+ + R DG L FE +K Y ++ + + +EI+ ++
Sbjct: 179 KCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYM 238
Query: 389 AGHS-----LGVYLGALL-IHRLGSARRPVPAAKIFSLLPEDQKCT-ATYTALIGVYFSA 441
+G + G Y+ L + G A R + +L ++Q + A+I
Sbjct: 239 SGETPNVVTYGTYIKGLCKVGLFGVAWRLIQ-----NLCRKNQPLNNHCFNAVIYGLCQG 293
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
G D+A +++K M GI P + ++++L+ G + GRV A E++++ + S
Sbjct: 294 GILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS 344
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 193/453 (42%), Gaps = 43/453 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG + F + ++ + R+ +F+ M +G+ D V YTS+M AG
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A NI +EM K +V+Y + LF + E+ + M Q GL P+ T+ +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTM 442
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + G AL++ ++M+ G++P+ CNIL+++ C AGE + +L M L
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM----L 498
Query: 238 ALRY---PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + P +A+ ++ +H Q V ++ LS
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQL-------------VGMGVKLDLSTYN 545
Query: 295 GLV-----LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
L+ L ++++ LV D + GI+ I ++ + I H ++ A+ +
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCIS---SHLKKAFAVHSQM 602
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ + N+E Y L+G L + A +V +M + G +L+ G
Sbjct: 603 LTEGVSPNVE--TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIG 660
Query: 410 RPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
K++ +P+ T TY LI + +A ++ + M +GI P+
Sbjct: 661 NMKECVKLYCEMITKGFVPK----TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNS 716
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADA 496
T+++L+ G KL + E+ + K+S QA+A
Sbjct: 717 STYDILICGWYKLSK--QPELNKSLKRSYQAEA 747
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 180/422 (42%), Gaps = 33/422 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++D + +++ + Y+++ M K + D VTYT +M+ L +G V+ A +++ EM
Sbjct: 89 TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P SY + LF V EA + M+ RG+ + YT LM+ L +AG
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
A ++F + E + P+ + LI+ CK G+ L+L+ M+E + V+
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268
Query: 248 LQTFK----VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ-GLVLILLK 302
+ + + + D + V P V T I+G DQ G+ L L K
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPN-------VFVYGTLIDGYFKADQRGIALDLFK 321
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+ + + ++ ++ VI + + R + A F+ + L +R
Sbjct: 322 E------------MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RLGSARRPV--PAAKI 417
Y +++ K I +EMT+ V +LI+ +LG +
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQ 429
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L P+ +AT+ +I Y G+ ALK+ M G+ P+ T N+L+ L G
Sbjct: 430 LGLAPD----SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485
Query: 478 RV 479
+
Sbjct: 486 EI 487
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 180/423 (42%), Gaps = 38/423 (8%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++D + IS + E M+ +G D VTY ++M+ GD+ A + E+
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
L P +++YT + + +++A +Y EM + L P+ TYT +M L ++GK E
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA +F +M+E GV P++ + LI+ K G ++ + R+ +R F +
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVL-----QGRMVVRGIGFDVVV 194
Query: 249 QT------FKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
T FK N++ ++QV + S V + ID L +
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEES-----------LVPNCVTYSALIDGHCKLGDV 243
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K L LL + +K I + V S+I++ + A+ V+ ++
Sbjct: 244 NKGEL-----LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF--- 418
Y LI K + ++ +EM G ++ ++ L + R A ++F
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358
Query: 419 ---SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
LLP+ YT+++ +F AG A I + M K + +NVL+ GL K
Sbjct: 359 MSRGLLPD----RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFK 414
Query: 476 LGR 478
LG+
Sbjct: 415 LGK 417
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 210/509 (41%), Gaps = 80/509 (15%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D YT ++D +A ++ + +F+++ E+ + + VTY++++ GDV+
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +EM+ K +P ++ Y++ + + EA DV ++M+QR + PN + Y L++
Sbjct: 246 GELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305
Query: 180 -----------------------------------YLVRAGKYEEALEIFSKMQEAGVQP 204
L R+G+ EEA E+F M G+ P
Sbjct: 306 GYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVAD-ENDSL 260
D+ +++ KAG+ I + M E + Y V L FK+ E++S
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL--FKLGKYESESF 423
Query: 261 LWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK-------KKNLVAIDSL 312
+ +P+ + N + EG L G L LL K N + + L
Sbjct: 424 HTGMRQLGLAPDSATFNTMINAYCK--EGNL----GNALKLLNEMKSYGLKPNSITCNIL 477
Query: 313 L-----SGIMDKSIQL--DSAVIS---------TIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ +G ++K++ L D V+ +++ + RR D L + V M +
Sbjct: 478 VQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGV 537
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
L+ + Y LI +L + + ++M G + LIH + A
Sbjct: 538 KLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597
Query: 417 IFS-LLPED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ S +L E TY L+G +A +A + M +G+ P+ T+++L++G
Sbjct: 598 VHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHG 657
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAVP 503
K+G + KE + + ++K VP
Sbjct: 658 KIGNM-------KECVKLYCEMITKGFVP 679
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 21 QDLLKNLPIKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
D L + +K D T N ++ T + +A L F + +G D TY ++ +
Sbjct: 529 HDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM-MGKGILADIITYNALIHGYC 587
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ + V M +G++ + TY ++ LS A + A + +MK + P
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647
Query: 138 SY----TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
+Y + + KI +KE +Y EMI +G P TY VL+ + K +A E+
Sbjct: 648 TYDILVSGHGKI----GNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Query: 194 FSKMQEAGVQPDKAACNILI 213
+MQ G+ P+ + +ILI
Sbjct: 704 MQEMQVRGIPPNSSTYDILI 723
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + + TY +L A+ I + M+E+G+ +A TY ++ G++
Sbjct: 604 TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMK 663
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL- 177
V ++ EM K P +Y + ++ +A ++ +EM RG+PPN TY +L
Sbjct: 664 ECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723
Query: 178 -----------MEYLVRAGKYEEALEIFSKMQEAGVQP--DKAAC 209
+ ++ EA +F +M E G P + AC
Sbjct: 724 CGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLAC 768
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 72/165 (43%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F+ R G D T+ TM++ + + + + + M+ G+ +++T ++ L
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG+++ +++ +M + +PT ++ A + + R ++ +++ G+ +
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLS 542
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
TY L+ R G A +F M G+ D N LI C
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 161/392 (41%), Gaps = 22/392 (5%)
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
++ + TY ++ + G++ + + EM+ C P +V+Y + R+ EA
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ K M +G+ PN +Y V++ L R G +EA EI +M G PD+ N L+
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
CK G ++I M N ++ + + + A N + + Q + N
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA-RNLNRAMEFFDQMRIRGLRPN 184
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ TT I+G QGL L +L+ + + + I +C
Sbjct: 185 ERT--YTTLIDG--FSRQGL---------LNEAYRILNEMTESGFSPSVVTYNAFIHGHC 231
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
R + AL + V+ L + +Y +I + + ++ +EM + G S
Sbjct: 232 VLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAV 291
Query: 397 LGALLIHRLGSARRPVPAAKIFS-----LLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
+ LI L RR A + LP D+ TYT LI Y G +KAL ++
Sbjct: 292 TYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE---FTYTTLINAYCVEGDLNKALHLH 348
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
M KG P T++VL+ GL K R +A+
Sbjct: 349 DEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A+ N ++ S GF+ TY + +R+ V + M EKG+ D V+Y+
Sbjct: 201 LNEAYRILNEMTES-GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYS 259
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G++D A + +EM K P V+Y++ ++ L R+ EA D+ +EM+
Sbjct: 260 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 319
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
GLPP+ +TYT L+ G +AL + +M G PD ++LI K TR
Sbjct: 320 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 377
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 98/208 (47%), Gaps = 36/208 (17%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++AW + +GF D TY T+L+ + + + M G++ VTYT
Sbjct: 96 MKEAWEILEEMGY-KGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYT 154
Query: 106 SVMHWLSNAGDVDGAVNIWEEMK-----------------------LKECY--------- 133
++++ + A +++ A+ +++M+ L E Y
Sbjct: 155 ALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES 214
Query: 134 ---PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P++V+Y A++ + +R++EA V +EM+++GL P+ +Y+ ++ R G+ + A
Sbjct: 215 GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRA 274
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCK 218
++ +M E GV PD + LI+ C+
Sbjct: 275 FQMKQEMVEKGVSPDAVTYSSLIQGLCE 302
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 136/327 (41%), Gaps = 24/327 (7%)
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
MI+ + PN YTY +L+ G+ ++ L F +M+ G P+ N LI+ CK G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 222 TRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDND 277
+L+ M + + Y V L E +L ++ + F+P+ ++ N
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
+ EG + Q LV+ +N V+ S+ +A+I+++ C
Sbjct: 121 LLNGYCK--EG--NFHQALVIHAEMVRNGVS----------PSVVTYTALINSM----CK 162
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
R + A+ F+ L Y LI + + I+ EMT++G S V
Sbjct: 163 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 222
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMC 455
IH R A + + E +Y+ +I + G D+A ++ + M
Sbjct: 223 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 282
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KG+ P T++ L+ GL ++ R+++A
Sbjct: 283 EKGVSPDAVTYSSLIQGLCEMRRLTEA 309
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/498 (21%), Positives = 207/498 (41%), Gaps = 24/498 (4%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYT---VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
+ +SA+ L +P+ ++YT V + L + A + + R RG Y
Sbjct: 102 RAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR-RGCAPIPPMY 160
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+L+ S V E + +G +D V++ + + G VD A+++ ++
Sbjct: 161 HVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS 220
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
C P +VSY A +K L + R ++ +EM++ PPN T+ L+ YL R G +E
Sbjct: 221 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 280
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
E+ ++M E G PD +I+ CK G IL M L + L+
Sbjct: 281 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 340
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
A+ W+ + E + ++ VT +I GLV +++
Sbjct: 341 GLCSAER-----WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE------- 388
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
LL ++++ D +T+I C D A++ + +Y ++
Sbjct: 389 --LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
L + +++ +M + G L LI+ L A ++ + + C+
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN-GCSP 505
Query: 430 ---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIY 485
+Y+ +I AG D+AL++ M KG+ P+ ++ + + L + GR++ +++
Sbjct: 506 DLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMF 565
Query: 486 RK-EKKSIQADALSKDAV 502
+ +I++DA+ +AV
Sbjct: 566 DNIQDTTIRSDAVLYNAV 583
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +YT +L A+R + + M ++G ++ +T+ +++++L G V+ A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++M + C P ++SY+ + L + EA ++ M+ +G+ PN Y+ +
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L R G+ + +++F +Q+ ++ D N +I CK GET I L YM
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 135/336 (40%), Gaps = 22/336 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + Y T+L A+R + + M +K +D VT+ ++ + G VD
Sbjct: 325 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + E+M + C P +++YT + + EA + K M G PN +YT+++
Sbjct: 385 RVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 444
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L A ++ +A ++ S+M + G + N LI CK G I +L+ M N +
Sbjct: 445 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 504
Query: 239 ---LRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y + L DE LL V+ SP I + + I LS
Sbjct: 505 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI--------IYSSIASALS--- 553
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++ + + + I D +I+ D+ + + +I C + A+ Y V
Sbjct: 554 -------REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ Y LI L + E++ E+ G
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 101/487 (20%), Positives = 181/487 (37%), Gaps = 70/487 (14%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR---GFNH 64
I + D A LL++LP + D + N VLK M K W +
Sbjct: 202 ICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC-MAKRWGCVQELMEEMVRMACPP 260
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ T+ T++ + V M E G D Y +++ + G ++ A I
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 320
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M P +V Y +K L +R +E ++ EM + P + T+ +L+++ +
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-----KENRLAL 239
G + +E+ +M E G PD +I CK G +++L+ M K N ++
Sbjct: 381 GLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS- 439
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSP-EFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y + + L + + + + L+ Q+ Q P I+ N + F
Sbjct: 440 -YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINF----------------- 481
Query: 299 ILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
L KK LV AI+ LL ++ D ST+I+ + D AL V +
Sbjct: 482 --LCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y ++ L + KV ++ + + + A+L
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNI----QDTTIRSDAVL--------------- 579
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
Y A+I G ++A++ M G P+ T+ +L+ GL
Sbjct: 580 --------------YNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 625
Query: 477 GRVSDAE 483
G V +A+
Sbjct: 626 GFVKEAQ 632
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/438 (18%), Positives = 160/438 (36%), Gaps = 63/438 (14%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
Y +++ AG ++ A + + + P +Y ++ L R+ +A V EM
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+RG P Y V++E R G + A+ + + G D CN+++ C G
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADE----NDSLLWQVHPQFSPEFISDNDAV 279
+ +LR + + L+ +A + + V P ++ N +
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 280 EFV---------------------TTDI------------EGPLSIDQGLVLILLK---K 303
++ T DI EG L + ++ + K
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 304 KNLVAIDSLLSGI----------------MDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
N+V ++LL G+ DK LD + +++ C + D +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
E ++ + Y +I K + +++ MT G +++ L S
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449
Query: 408 ARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
A R V A + S + + Q C T+ LI G ++A+++ K M G P L
Sbjct: 450 AERWVDAEDLMSQMIQ-QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508
Query: 465 TFNVLLAGLEKLGRVSDA 482
+++ ++ GL K G+ +A
Sbjct: 509 SYSTVIDGLGKAGKTDEA 526
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ ELM G D V+Y +++ L G+VD A
Sbjct: 322 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAA 381
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + ++K K C P ++SY + L + +EA ++ EM+ +GL P+ TY+ +
Sbjct: 382 VELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSG 441
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L R G+ EEA++ F K+Q+ G++P+ N ++ CK T + I + YM N
Sbjct: 442 LCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSN 496
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 158/362 (43%), Gaps = 26/362 (7%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
D+A+ L+ +P++ D+YT N +++ + A + + R RG D TYT +L+
Sbjct: 137 DNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLR-RGCVPDVVTYTILLE 195
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + + M++KG D VTY V++ + G VD A+ + + C P
Sbjct: 196 ATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEP 255
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
VSY +K L +R ++A + EM ++G PPN T+ +L+ +L R G E A+EI
Sbjct: 256 NTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEIL 315
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTF 251
++ + G P+ + N ++ CK + + + M + + Y AL
Sbjct: 316 DQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRG 375
Query: 252 KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
D LL Q+ + +P IS N ++ +T K A++
Sbjct: 376 GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK-----------------AGKTEEALE 418
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
LL+ ++ K +Q D STI C R + A+ AF M + Y A++ L
Sbjct: 419 -LLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGL 477
Query: 371 IK 372
K
Sbjct: 478 CK 479
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/386 (18%), Positives = 150/386 (38%), Gaps = 56/386 (14%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D ++Y +++ G +D A + M ++ P +Y ++ L R A V
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVL 175
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+M++RG P+ TYT+L+E + Y++A+++ +M++ G PD N+++ C+
Sbjct: 176 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G + L+ + + L+ A+ W+ + E
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAER-----WEDAEKLMAEMSRKGRPP 290
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
VT ++ L+ L ++ + +L I +S + I+ C +
Sbjct: 291 NVVTFNM---------LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQK 341
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ D A+ A + +++ +P + +T V
Sbjct: 342 KMDRAM-------------------AFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCR 456
L+H+L +D+ CT +Y +I AG ++AL++ M
Sbjct: 383 ELLHQL-----------------KDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVT 425
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
KG+ P + T++ + +GL + GR+ +A
Sbjct: 426 KGLQPDIITYSTISSGLCREGRIEEA 451
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G +Y T++D +A + + M KG+ D +TY+++ L G +
Sbjct: 389 KDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRI 448
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ + +++ P V Y A + L A D++ M+ G PN TYT+L
Sbjct: 449 EEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTIL 508
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGV 202
+E L G +EA E+ +++ GV
Sbjct: 509 IEGLAYEGLVKEAREMMAELCSRGV 533
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ ELM +G D V+Y +++ L G+VD A
Sbjct: 326 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAA 385
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + ++K K C P ++SY + L + KEA ++ EM+ +GL P+ TY+ +
Sbjct: 386 VELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSG 445
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L R + EEA+ F K+Q+ G++P+ N ++ CK ET I + YM N
Sbjct: 446 LCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISN 500
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 157/362 (43%), Gaps = 26/362 (7%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
D+A+ L+ ++P++ DSYT N +++ A + + + R RG D TYT +L+
Sbjct: 141 DAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLR-RGCVPDVVTYTILLE 199
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + + M+ KG D +TY V++ + G VD A+ + + C P
Sbjct: 200 ATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEP 259
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
VSY +K L +R ++A + EM Q+G PPN T+ +L+ +L R G E A+E+
Sbjct: 260 NTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVL 319
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTF 251
++ + G P+ + N ++ CK + + + M + Y AL
Sbjct: 320 DQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRG 379
Query: 252 KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
D LL Q+ + +P IS N ++ +T K A++
Sbjct: 380 GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK-----------------AGKTKEALE 422
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
LL+ ++ K +Q D STI C R + A+ AF M + Y A++ L
Sbjct: 423 -LLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481
Query: 371 IK 372
K
Sbjct: 482 CK 483
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 158/390 (40%), Gaps = 64/390 (16%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D + Y +++ G +D A + +M ++ P +Y ++ L R A V
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALVVL 179
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+M++RG P+ TYT+L+E + Y++A+++ +M+ G PD N+++ C+
Sbjct: 180 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQE 239
Query: 220 GETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISD 275
G I L+ + + + Y + + L T + ++ + L+ ++ + + P ++
Sbjct: 240 GRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTF 299
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N + F+ +GLV ++ +L I +S + I+
Sbjct: 300 NMLISFLCR---------RGLVEPAME---------VLDQIPKYGCTPNSLSYNPILHAF 341
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C ++ D A+ A + +++ +P + +T V
Sbjct: 342 CKQKKMDRAM-------------------AFVELMVSRGCYPDIVSYNTLLTALCRGGEV 382
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYK 452
L+H+L +D+ CT +Y +I AG +AL++
Sbjct: 383 DAAVELLHQL-----------------KDKGCTPVLISYNTVIDGLTKAGKTKEALELLN 425
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M KG+ P + T++ + +GL + R+ +A
Sbjct: 426 EMVTKGLQPDIITYSTISSGLCREDRIEEA 455
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 42/226 (18%)
Query: 18 DSAQDLLKNLP---IKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
+ A ++L +P +S + N +L M++A F + SRG D +Y T
Sbjct: 313 EPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV-SRGCYPDIVSYNT 371
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + + + +++KG ++Y +V+ L+ AG A+ + EM K
Sbjct: 372 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431
Query: 132 CYPTIVSYTAYMKILFLNDRVKEAT----------------------------------- 156
P I++Y+ L DR++EA
Sbjct: 432 LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAI 491
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
D++ MI G PN TYT+L+E L G +EA E+ ++ GV
Sbjct: 492 DLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 193/453 (42%), Gaps = 43/453 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG + F + ++ + R+ +F+ M +G+ D V YTS+M AG
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A NI +EM K +V+Y + LF + E+ + M Q GL P+ T+ +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTM 442
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + G AL++ ++M+ G++P+ CNIL+++ C AGE + +L M L
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM----L 498
Query: 238 ALRY---PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + P +A+ ++ +H Q V ++ LS
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQL-------------VGMGVKLDLSTYN 545
Query: 295 GLV-----LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
L+ L ++++ LV D + GI+ I ++ + I H ++ A+ +
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCIS---SHLKKAFAVHSQM 602
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ + N+E Y L+G L + A +V +M + G +L+ G
Sbjct: 603 LTEGVSPNVE--TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIG 660
Query: 410 RPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
K++ +P+ T TY LI + +A ++ + M +GI P+
Sbjct: 661 NMKECVKLYCEMITKGFVPK----TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNS 716
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADA 496
T+++L+ G KL + E+ + K+S QA+A
Sbjct: 717 STYDILICGWYKLSK--QPELNKSLKRSYQAEA 747
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 180/422 (42%), Gaps = 33/422 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++D + +++ + Y+++ M K + D VTYT +M+ L +G V+ A +++ EM
Sbjct: 89 TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P SY + LF V EA + M+ RG+ + YT LM+ L +AG
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
A ++F + E + P+ + LI+ CK G+ L+L+ M+E + V+
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268
Query: 248 LQTFK----VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ-GLVLILLK 302
+ + + + D + V P V T I+G DQ G+ L L K
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPN-------VFVYGTLIDGYFKADQRGIALDLFK 321
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+ + + ++ ++ VI + + R + A F+ + L +R
Sbjct: 322 E------------MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RLGSARRPV--PAAKI 417
Y +++ K I +EMT+ V +LI+ +LG +
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQ 429
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L P+ +AT+ +I Y G+ ALK+ M G+ P+ T N+L+ L G
Sbjct: 430 LGLAPD----SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485
Query: 478 RV 479
+
Sbjct: 486 EI 487
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 180/423 (42%), Gaps = 38/423 (8%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++D + IS + E M+ +G D VTY ++M+ GD+ A + E+
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
L P +++YT + + +++A +Y EM + L P+ TYT +M L ++GK E
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA +F +M+E GV P++ + LI+ K G ++ + R+ +R F +
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVL-----QGRMVVRGIGFDVVV 194
Query: 249 QT------FKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
T FK N++ ++QV + S V + ID L +
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEES-----------LVPNCVTYSALIDGHCKLGDV 243
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K L LL + +K I + V S+I++ + A+ V+ ++
Sbjct: 244 NKGEL-----LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF--- 418
Y LI K + ++ +EM G ++ ++ L + R A ++F
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358
Query: 419 ---SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
LLP+ YT+++ +F AG A I + M K + +NVL+ GL K
Sbjct: 359 MSRGLLPD----RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFK 414
Query: 476 LGR 478
LG+
Sbjct: 415 LGK 417
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 210/509 (41%), Gaps = 80/509 (15%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D YT ++D +A ++ + +F+++ E+ + + VTY++++ GDV+
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +EM+ K +P ++ Y++ + + EA DV ++M+QR + PN + Y L++
Sbjct: 246 GELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305
Query: 180 -----------------------------------YLVRAGKYEEALEIFSKMQEAGVQP 204
L R+G+ EEA E+F M G+ P
Sbjct: 306 GYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVAD-ENDSL 260
D+ +++ KAG+ I + M E + Y V L FK+ E++S
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL--FKLGKYESESF 423
Query: 261 LWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK-------KKNLVAIDSL 312
+ +P+ + N + EG L G L LL K N + + L
Sbjct: 424 HTGMRQLGLAPDSATFNTMINAYCK--EGNL----GNALKLLNEMKSYGLKPNSITCNIL 477
Query: 313 L-----SGIMDKSIQL--DSAVIS---------TIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ +G ++K++ L D V+ +++ + RR D L + V M +
Sbjct: 478 VQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGV 537
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
L+ + Y LI +L + + ++M G + LIH + A
Sbjct: 538 KLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597
Query: 417 IFS-LLPED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ S +L E TY L+G +A +A + M +G+ P+ T+++L++G
Sbjct: 598 VHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHG 657
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAVP 503
K+G + KE + + ++K VP
Sbjct: 658 KIGNM-------KECVKLYCEMITKGFVP 679
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 21 QDLLKNLPIKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
D L + +K D T N ++ T + +A L F + +G D TY ++ +
Sbjct: 529 HDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM-MGKGILADIITYNALIHGYC 587
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ + V M +G++ + TY ++ LS A + A + +MK + P
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647
Query: 138 SY----TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
+Y + + KI +KE +Y EMI +G P TY VL+ + K +A E+
Sbjct: 648 TYDILVSGHGKI----GNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Query: 194 FSKMQEAGVQPDKAACNILI 213
+MQ G+ P+ + +ILI
Sbjct: 704 MQEMQVRGIPPNSSTYDILI 723
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + + TY +L A+ I + M+E+G+ +A TY ++ G++
Sbjct: 604 TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMK 663
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL- 177
V ++ EM K P +Y + ++ +A ++ +EM RG+PPN TY +L
Sbjct: 664 ECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723
Query: 178 -----------MEYLVRAGKYEEALEIFSKMQEAGVQP--DKAAC 209
+ ++ EA +F +M E G P + AC
Sbjct: 724 CGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLAC 768
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 72/165 (43%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F+ R G D T+ TM++ + + + + + M+ G+ +++T ++ L
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG+++ +++ +M + +PT ++ A + + R ++ +++ G+ +
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLS 542
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
TY L+ R G A +F M G+ D N LI C
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 170/420 (40%), Gaps = 55/420 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T M+D +A+R+ +FE + K DAVTY S++ L G VD A ++E+M
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P V YT+ ++ F R ++ +Y EM++ G P+ M+ + +AG+
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEI 565
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
E+ +F +++ G PD + ILI KAG + MKE L +
Sbjct: 566 EKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTV 625
Query: 248 LQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ F K N + +Q+ +E + T P + G V+ L
Sbjct: 626 IDGFCKSGKVNKA--YQL--------------LEEMKTKGHEPTVVTYGSVI-----DGL 664
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
ID R D A + FE + + L Y +L
Sbjct: 665 AKID-----------------------------RLDEAYMLFEEAKSKGIELNVVIYSSL 695
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I K+ + I+EE+ + G + VY L+ L A A F + +D K
Sbjct: 696 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM-KDLK 754
Query: 427 CTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
CT TY+ LI +KA ++ M ++G P++ T+ +++GL K G + +A+
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEAD 814
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 201/444 (45%), Gaps = 33/444 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S D Y +D FG+A ++ F M+ G+ +D VTYTS++ L A +
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRL 321
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ AV ++E M + P +Y + + + ++A + + ++G P+ +Y +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L R G+ +EAL+ F +M++ + P+ + NI+I+ CKAG+ T +++ MK+ L
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440
Query: 238 ---ALRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ + + L + D+ S+ + H P DAV + + IEG
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP------DAVTYCSL-IEG----- 488
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN---CDHRRRDGALLAFEY 350
L + + L ++D + Q+ +AV+ T + N C R+ DG + +
Sbjct: 489 ------LGRHGRVDEAYKLYEQMLDAN-QIPNAVVYTSLIRNFFKCG-RKEDGHKI-YNE 539
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+++ + + + + K K + +E+ G +LIH L A
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599
Query: 411 PVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A ++F + E Q C T Y +I + +G +KA ++ + M KG P++ T+
Sbjct: 600 AHEAYELFYTMKE-QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 468 VLLAGLEKLGRVSDAEIYRKEKKS 491
++ GL K+ R+ +A + +E KS
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKS 682
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 154/354 (43%), Gaps = 26/354 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EK F + ++ GF D +YT ++ +A +F M+E+G +D Y
Sbjct: 565 IEKGRALFQEI-KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+V+ +G V+ A + EEMK K PT+V+Y + + L DR+ EA +++E +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ N Y+ L++ + G+ +EA I ++ + G+ P+ N L++ KA E
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 226 ILILRYMKENRLALRYPVFKEALQTF-KVADENDS-LLWQVHPQ--FSPEFISDNDAVEF 281
++ + MK+ + Y + + K+ N + + WQ + F P +
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT------- 796
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
TT I G L K N+V D+L +K DSA+ + IIE + R
Sbjct: 797 YTTMISG-----------LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRA 845
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK---VAEIVEEMTKAGHS 392
A FE + ++ + L+ L K + V ++ E KA H+
Sbjct: 846 SDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHA 899
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 184/443 (41%), Gaps = 43/443 (9%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ Y TM+ +G A + + E + KG V+Y ++ L G VD A+ +EE
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK K+ P + +Y + +L +++ A V M GL PN T ++++ L +A +
Sbjct: 401 MK-KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++A IF + +PD LIE + G + M + V+
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 247 ALQTF-KVADENDSLLWQVHPQF-----SPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
++ F K + D +++ + SP+ + N ++ V E I++G L
Sbjct: 520 LIRNFFKCGRKEDG--HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE----IEKGRAL-F 572
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE--YSVK-MDLN 357
+ KNL I S + +I +++ H A+E Y++K
Sbjct: 573 QEIKNLGFIPDARSYTI---------LIHGLVKAGFAHE-------AYELFYTMKEQGCV 616
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
L+ AY +I K K +++EEM GH V +I L R A +
Sbjct: 617 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYML 676
Query: 418 FSLLPEDQKCTAT------YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
F E+ K Y++LI + G D+A I + + +KG+ P++ T+N LL
Sbjct: 677 F----EEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732
Query: 472 GLEKLGRVSDAEIYRKEKKSIQA 494
L K +S+A + + K ++
Sbjct: 733 ALVKAEEISEALVCFQSMKDLKC 755
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/547 (18%), Positives = 193/547 (35%), Gaps = 89/547 (16%)
Query: 2 RDTISNVYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
R I +V +IL+ W S+ ++ L L + + V VL+ + A +F W R
Sbjct: 65 RQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLT 124
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVT----------------- 103
H R Y ++L + ++ + ++ + E M G T
Sbjct: 125 DRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREA 184
Query: 104 ------------------YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
YT+++ LS + D D + ++++M+ + +T +++
Sbjct: 185 FTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRV 244
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
RV A + EM L P+ Y V ++ +AGK + A + F +M+ G+ D
Sbjct: 245 FAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLD 304
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
+I CKA + + +M +N+ + + + +A + + +
Sbjct: 305 DVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLE 364
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN--------------LVAIDS 311
Q I + + + + +D+ L KK+ L
Sbjct: 365 RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGK 424
Query: 312 LLSGIMDKSIQLDSAVISTIIEVN------CDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
L + ++ + D+ + +I VN C +R D A FE + Y +
Sbjct: 425 LETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCS 484
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
LI L + + ++ E+M A +P A +
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQ--------------------IPNAVV-------- 516
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
YT+LI +F G + KIY M R G P L N + + K G +
Sbjct: 517 -----YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 486 RKEKKSI 492
+E K++
Sbjct: 572 FQEIKNL 578
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 209/482 (43%), Gaps = 41/482 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTY 104
+ A FF+ + S G + +TY ++ + G R ++ + M+ G + VTY
Sbjct: 131 LTSARRFFDSM-LSDGVAPNVYTYNILIRALCGRGHRKEALS-ILRDMRGAGCGPNVVTY 188
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+++ AG+VDGA + M P +V++ + + + ++++A V+ EM++
Sbjct: 189 NTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMR 248
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
GL P+ +Y L+ +AG EAL +F++M + G+ PD LI CKAG
Sbjct: 249 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEW 308
Query: 225 IILILRYMKENRLALRYPVFKEALQTF-KVADENDSLL---WQVHPQFSPEFISDNDAV- 279
+ ++R M+E L + F + F K +D+LL + P + N +
Sbjct: 309 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALIN 368
Query: 280 ----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
E ++ + ++ K + + L +++K +
Sbjct: 369 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 428
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D+ S++I V C+ +R A + F+ +K+ L + Y +LI K + +
Sbjct: 429 DAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLH 488
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK-IFSL-----LPEDQKCTA-------- 429
++M KAG V ++LI+ L + R + A + +F L +P + K A
Sbjct: 489 DKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKA 548
Query: 430 ---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
+ AL+ + G ++A K+Y++M + + ++VL+ G + G V A +
Sbjct: 549 ELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFH 608
Query: 487 KE 488
K+
Sbjct: 609 KQ 610
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 181/464 (39%), Gaps = 95/464 (20%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ Y +L +A S+ ++ F+ M G+ + TY ++ L G A
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRF-FDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++I +M+ C P +V+Y + F V A + M+ GL PN T+ ++
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ +AGK E+A ++F +M G+ PD + N L+ CKAG +
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSH----------------- 272
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
EAL F + + P D V F + L+ ++
Sbjct: 273 -----EALSVFAEMTQKG-----IMP----------DVVTFTS------------LIHVM 300
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K NL +L+ + ++ +Q++ + +I+ C D ALLA + +
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSV 360
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAG---------------------HSL------ 393
Y ALI + + E++ EM G HS
Sbjct: 361 VCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQ 420
Query: 394 ----GVYLGAL----LIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYF 439
GV A+ LI L +R A +F L P++ TYT+LI +
Sbjct: 421 MLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDE----FTYTSLIDGHC 476
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ ++AL ++ M + G+ P + T++VL+ GL K R +A+
Sbjct: 477 KEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 123/337 (36%), Gaps = 54/337 (16%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ Y ++ L A A F M GV P+ NILI C G +
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ ILR M+ + + F A E D A V
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDG------------------AERLVGMM 211
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
++G L K NLV +S+++G+ C + + A
Sbjct: 212 LDGGL------------KPNLVTFNSMVNGM-------------------CKAGKMEDAR 240
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ ++ L + +Y L+G K + + EMT+ G V LIH +
Sbjct: 241 KVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 300
Query: 406 GSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A A + + E Q T+TALI + G D AL + M + I PS+
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSV 360
Query: 464 GTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
+N L+ G +GR+ +A ++ E K ++ D ++
Sbjct: 361 VCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVT 397
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
TY L+ +F AG D A ++ M G+ P+L TFN ++ G+ K G++ DA RK
Sbjct: 187 TYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDA---RKVF 243
Query: 490 KSIQADALSKDAV 502
+ + L+ D V
Sbjct: 244 DEMMREGLAPDGV 256
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 56/117 (47%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V++ M ++ N+D Y+ ++H AG+V A++ ++M + P S + ++ LF
Sbjct: 572 VYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLF 631
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
N V EA V ++++ + L++ + G + L++ M + G+ P
Sbjct: 632 ENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 104/202 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY ML+ + A + + F M+++ +ID VTYTSV+H L G++
Sbjct: 225 RGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKR 284
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N++ +M P++ ++ A ++IL D V+ A +++EM++RG PN TY +++
Sbjct: 285 ARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIR 344
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L G+ + A+E+ +M++ +P+ NILI C AGE + + + M
Sbjct: 345 GLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLP 404
Query: 240 RYPVFKEALQTFKVADENDSLL 261
+ + + V +D+LL
Sbjct: 405 NLDTYNILINSMFVRKNSDNLL 426
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 102/205 (49%), Gaps = 1/205 (0%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRG-FNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
D + N +L ++ + +N +G F D +Y +++ + KR + +
Sbjct: 161 DLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLK 220
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M E+G+ + TY +++ AG + A + EMK ++C +V+YT+ + L +
Sbjct: 221 EMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVG 280
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+K A +V+ +M++ G+ P+ T+ L++ L + E A+ IF +M + G P+ N
Sbjct: 281 EIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYN 340
Query: 211 ILIEKCCKAGETRTIILILRYMKEN 235
++I C GE + + ++ M+++
Sbjct: 341 LVIRGLCHVGEMQRAMELMERMEDD 365
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/469 (18%), Positives = 173/469 (36%), Gaps = 94/469 (20%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRF 67
IL + + + L + I+W VN +LK H P KA FF +S + H
Sbjct: 36 ILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGP--KALHFFKILSHHPSYCHQAS 93
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
++ +DI + ++ ++ M+ + T+ + + G AV ++ M
Sbjct: 94 SFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSM 153
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C+ + S+ + +L + RV+ A +++K + + +C +Y +++ +
Sbjct: 154 HEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGK-FKADCVSYNIIVNGWCLIKRT 212
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ALE+ +M E G+ P+ NI++ +AG+T MK+ +
Sbjct: 213 PKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRK----------- 261
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
D D V + T+ I G G+V + + +N
Sbjct: 262 --------------------------CDIDVVTY-TSVIHG-----LGVVGEIKRARN-- 287
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ + ++ + A + +I++ C + A+L FE VK Y +I
Sbjct: 288 ----VFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVI 343
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L + + E++E M ED C
Sbjct: 344 RGLCHVGEMQRAMELMERM------------------------------------EDDDC 367
Query: 428 ---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
TY LI + AG +K L +++ M P+L T+N+L+ +
Sbjct: 368 EPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSM 416
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
Q+L +E A L F + + RG+ + TY ++ + + E M++
Sbjct: 309 QILCKKDSVENAILIFEEMVK-RGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDC 367
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL---NDRVKE 154
+ TY ++ + +AG+++ ++++++M +C P + +Y + +F+ +D +
Sbjct: 368 EPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLV 427
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
A + EM+ RG P T+ +++ L+ G + A EI S G P K
Sbjct: 428 AGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEILSLQGGCGRLPRK 479
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D + +TI++V C +R + A F+ ++K + +Y ++ + PK E++
Sbjct: 161 DLSSFNTILDVLCKSKRVEMAYNLFK-ALKGKFKADCVSYNIIVNGWCLIKRTPKALEML 219
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFS 440
+EM + G + + ++++ A + A F L + +KC TYT++I
Sbjct: 220 KEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFF-LEMKKRKCDIDVVTYTSVIHGLGV 278
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G +A ++ M + G+ PS+ TFN L+ L K V +A
Sbjct: 279 VGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENA 320
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 113/272 (41%), Gaps = 17/272 (6%)
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
I+ C + + RT+ ++ M+ RL + +TF + E + + + H + F
Sbjct: 99 IDICARLRDFRTLWFLVSRMRSCRLG-------PSPRTFAIIAERYAAMGKPHRAVTV-F 150
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+S ++ F LS ++ +L K K + +L + K + D + I+
Sbjct: 151 MSMHEYGCF------QDLSSFNTILDVLCKSKRVEMAYNLFKALKGK-FKADCVSYNIIV 203
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C +R AL + V+ L T Y ++ + + EM K
Sbjct: 204 NGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCD 263
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKI 450
+ V +IH LG A +F+ + +D AT+ ALI + S + A+ I
Sbjct: 264 IDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILI 323
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M ++G P+ T+N+++ GL +G + A
Sbjct: 324 FEEMVKRGYVPNSITYNLVIRGLCHVGEMQRA 355
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 195/471 (41%), Gaps = 67/471 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G D +L ++ R+ K VF ++ G+ D +TYT ++ S A +
Sbjct: 453 KSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNA 512
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ ++ EM C P +++ + + L+ R EA ++ E+ + L P TY L
Sbjct: 513 DEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTL 572
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM----- 232
+ L R GK +E + + +M P+ N +++ CK GE + +L M
Sbjct: 573 LAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGC 632
Query: 233 ---------------KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
KE+RL + +F Q KV + + L + P F + N+
Sbjct: 633 MPDLSSYNTALHGLVKEDRLTEAFRIF---CQMKKVLAPDYTTLCTILPSFVKNGLM-NE 688
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI-----MDKSIQ---------- 322
A+ + I P S K + + SL+ GI M+KSI+
Sbjct: 689 ALHTLKEYILQPGS-----------KADRSSFHSLMEGILKRAGMEKSIEFAENIALSRI 737
Query: 323 -LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD---LNLERTAYLALIGILIKLNTFPK 378
LD +S +I C ++ AL A E K + ++L+ +Y ALI L+ N
Sbjct: 738 LLDDFFLSPLIRHLCKSKK---ALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDV 794
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA------TYT 432
+ EM + G + L++ +G + R K+ ++ C TY
Sbjct: 795 AEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKV----QKEMHCKGYESTYVTYN 850
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+I + +A+ +Y + +G P+ T+ LL GL K G++ DAE
Sbjct: 851 TIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAE 901
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 178/465 (38%), Gaps = 50/465 (10%)
Query: 33 SYTVN-QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
SYT+ +VL E+A+ + G D T T ++ I +A R+S K VF
Sbjct: 253 SYTICIRVLGQAGRFEEAYKILQKM-EDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWK 311
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ D VTY +++ + GD + IW MK +V+YTA + L R
Sbjct: 312 MKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGR 371
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V EA+DV+ +M Q+G+ P Y+Y L+ ++A + ALE+F+ M G P+ +
Sbjct: 372 VDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVL 431
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
I K+GE+ I MK + L + + H S
Sbjct: 432 FINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIG 491
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
DN + + D+ + + S +++ D ++++
Sbjct: 492 VCPDNITYTMMIKCCSKASNADEAM--------------KVFSEMIETRCVPDVLAVNSL 537
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ R + A F +M+L+ Y L+ L + +V ++EEM +
Sbjct: 538 IDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSY 597
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
P I TY ++ G + AL +
Sbjct: 598 ---------------------PPNLI------------TYNTVLDCLCKNGEVNYALGML 624
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQAD 495
M KG P L ++N L GL K R+++A I+ + KK + D
Sbjct: 625 YNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPD 669
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 198/457 (43%), Gaps = 29/457 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G +++Y +++ F +A R++ +F M G + TY +++ +G+
Sbjct: 383 KQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGES 442
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ +E MK K P +V+ A + L + R+ A V+ E+ G+ P+ TYT++
Sbjct: 443 LKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMM 502
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +A +EA+++FS+M E PD A N LI+ KAG I +KE L
Sbjct: 503 IKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNL 562
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSID 293
Y L E LL +++ + P I+ N ++ + + G ++
Sbjct: 563 DPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKN--GEVNYA 620
Query: 294 QGLVLILLKK---KNLVAIDSLLSGI---------------MDKSIQLDSAVISTIIEVN 335
G++ + K +L + ++ L G+ M K + D + TI+
Sbjct: 621 LGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSF 680
Query: 336 CDHRRRDGALLAF-EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
+ + AL EY ++ +R+++ +L+ ++K K E E + + L
Sbjct: 681 VKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLD 740
Query: 395 VYLGALLIHRLGSARRPVPA---AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
+ + LI L +++ + A K F L K T +Y ALI D A ++
Sbjct: 741 DFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLK-TGSYNALICGLVDENLIDVAEGLF 799
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
M R G P T+N++L + K R+ D +KE
Sbjct: 800 SEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKE 836
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 185/489 (37%), Gaps = 55/489 (11%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ----------- 93
P E LF + + R H + ML++ R+ M VF+LMQ
Sbjct: 92 PAEALQLFKSVAQQPR-IVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTF 150
Query: 94 ------------------------EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
E GI +++ TY ++++L +G A+ +++ M
Sbjct: 151 LTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMAT 210
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
P++ +Y+ M + F V+ + +EM G+ PN Y+YT+ + L +AG++EE
Sbjct: 211 DGIVPSVRTYSVLM-LAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEE 269
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A +I KM++ G +PD +LI+ C AG + MK + + L
Sbjct: 270 AYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLD 329
Query: 250 TFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
K D DS + ++ + +DN D L + +
Sbjct: 330 --KCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVD-------------ALCQVGRVDE 374
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ + K I+ +++I R + AL F + Y+ I
Sbjct: 375 ASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFIN 434
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC- 427
K K + E M G V G +++ L + R A ++F L C
Sbjct: 435 YYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCP 494
Query: 428 -TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
TYT +I A +AD+A+K++ M P + N L+ L K GR ++A
Sbjct: 495 DNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIF 554
Query: 487 KEKKSIQAD 495
E K + D
Sbjct: 555 HELKEMNLD 563
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 184/469 (39%), Gaps = 88/469 (18%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG------------ 115
T+ T+ G + S +M+E GI +++ TY ++++L +G
Sbjct: 149 TFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVM 208
Query: 116 ----------------------DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
DV+ V + EM+ P + SYT +++L R +
Sbjct: 209 ATDGIVPSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFE 268
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
EA + ++M G P+ T TVL++ L AG+ +A ++F KM+ + +PD+ L+
Sbjct: 269 EAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLL 328
Query: 214 EKCCKAGETRTIILILRYMKE---NRLALRYPVFKEALQTFKVADENDSLLWQ-----VH 265
+KC G++R++I I MK N + Y +AL DE + Q +
Sbjct: 329 DKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIE 388
Query: 266 PQ-------FSPEFISD--NDAVE-FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
PQ S +D N A+E F +I GP G +L + +S L
Sbjct: 389 PQQYSYNSLISGFLKADRLNHALELFNHMNIHGP--TPNGYTYVLFINYYGKSGES-LKA 445
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
I + ++ ++ N A YS L ++ L +
Sbjct: 446 IKRYELMKSKGIVPDVVAGN-----------AVLYS------LAKSGRLGM--------- 479
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA-- 433
+ E+ G ++I A A K+FS + E +C A
Sbjct: 480 ---AKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIE-TRCVPDVLAVN 535
Query: 434 -LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
LI + AG ++A KI+ + + P+ T+N LLAGL + G+V +
Sbjct: 536 SLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKE 584
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D FTY +LD G++ RI M V + M KG VTY +++ L + + A
Sbjct: 806 GCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEA 865
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ ++ + PT +Y + L + ++++A D++ EM+ G PN Y +L+
Sbjct: 866 MDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNG 925
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AG E+ E+F M + G+ PD + +LI C AG + R + E
Sbjct: 926 YRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTE 979
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 84/163 (51%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF+ TY +LD + +I + +F+ M + G + Y +++ AG+ +
Sbjct: 874 SEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTE 933
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ M + P I SYT + L R+ ++ ++++ + GL P+ TY +L+
Sbjct: 934 KVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLI 993
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L R+G+ EEA+ +F+ M+++G+ P+ N LI K G+
Sbjct: 994 HGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGK 1036
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
LF N V + G N D +YT ++ A R++ F + E G+ D +TY ++H
Sbjct: 938 LFQNMVDQ--GINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHG 995
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L +G ++ AV+++ +M+ P + +Y + + L + EA +Y+E+++ G PN
Sbjct: 996 LGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPN 1055
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+TY L+ +G + A + +M G P+ +
Sbjct: 1056 VFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSS 1092
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 86/162 (53%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +R Y +L+ + A + +F+ M ++GIN D +YT ++ L AG ++ +
Sbjct: 911 GCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDS 970
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ + ++ P +++Y + L + R++EA ++ +M + G+ PN YTY L+ Y
Sbjct: 971 LSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILY 1030
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L + GK EA +++ ++ + G +P+ N LI +G T
Sbjct: 1031 LGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGST 1072
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 105/221 (47%), Gaps = 10/221 (4%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS-----RSRGFNHDRFTYTTMLDIFGE 78
+K L D +T N +L M K+ + + +G+ TY T++ +
Sbjct: 802 MKRLGCDPDEFTYNLILDA---MGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVK 858
Query: 79 AKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+K + +M ++LM E G + TY ++ L G ++ A ++++EM C P
Sbjct: 859 SKMLYEAMDLYYKLMSE-GFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRA 917
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
Y + L ++ ++++ M+ +G+ P+ +YTVL+ L AG+ ++L F ++
Sbjct: 918 IYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQL 977
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
E G++PD N+LI ++G + + M+++ +A
Sbjct: 978 TELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIA 1018
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 162/427 (37%), Gaps = 60/427 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEK+ F ++ SR D F + ++ ++K+ + + + G+++ +Y
Sbjct: 722 MEKSIEFAENIALSRIL-LDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYN 780
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L + +D A ++ EMK C P +Y + + + R+++ V KEM +
Sbjct: 781 ALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCK 840
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G TY ++ LV++ EA++++ K+ G P C G
Sbjct: 841 GYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTP----------CTYG----- 885
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
P+ L+ K+ D D + P
Sbjct: 886 ----------------PLLDGLLKDGKIEDAEDLFDEMLDYGCKP--------------- 914
Query: 286 IEGPLSIDQGLVLILLKKKNLVA----IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
++ + ILL L + L ++D+ I D + +I C R
Sbjct: 915 -------NRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRL 967
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
+ +L F ++ L + Y LI L + + + +M K+G + +Y L
Sbjct: 968 NDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSL 1027
Query: 402 IHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
I LG + A K++ L ++ + TY ALIG Y +GS D A Y M G
Sbjct: 1028 ILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGC 1087
Query: 460 HPSLGTF 466
P+ T+
Sbjct: 1088 PPNSSTY 1094
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 168/427 (39%), Gaps = 34/427 (7%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQE----KGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
YTT+ I + M ++E G D ++ S+M + ++ ++
Sbjct: 670 YTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFA 729
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E + L + ++ L + + EA ++ K+ G+ +Y L+ LV
Sbjct: 730 ENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDE 789
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA------ 238
+ A +FS+M+ G PD+ N++++ G++ I +L+ KE
Sbjct: 790 NLIDVAEGLFSEMKRLGCDPDEFTYNLILDA---MGKSMRIEDMLKVQKEMHCKGYESTY 846
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ Y L K+ E L +++ + FSP T GPL +D
Sbjct: 847 VTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSP------------TPCTYGPL-LDG--- 890
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
LLK + + L ++D + + A+ + ++ + F+ V +N
Sbjct: 891 --LLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGIN 948
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ +Y LIG L ++T+ G + LLIH LG + R A +
Sbjct: 949 PDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSL 1008
Query: 418 FSLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F+ + + TY +LI G A +A K+Y+ + + G P++ T+N L+ G
Sbjct: 1009 FNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSV 1068
Query: 476 LGRVSDA 482
G +A
Sbjct: 1069 SGSTDNA 1075
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++ G + R+ +F M++ GI + TY S++ +L G A
Sbjct: 981 GLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEA 1040
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++EE+ P + +Y A + ++ A Y +MI G PPN TY L
Sbjct: 1041 GKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQ 1100
Query: 181 LV 182
L+
Sbjct: 1101 LL 1102
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
A Y L+ Y AG+ +K ++++ M +GI+P + ++ VL+ L GR++D+ Y ++
Sbjct: 917 AIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQ 976
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 190/473 (40%), Gaps = 24/473 (5%)
Query: 18 DSAQDLLKN-LPIKWDSYTVNQVLKTHPPMEK---AWLFFNWVSRSRGFNHDRFTYTTML 73
+S DL N IK V+ VLK+ ++ A FF W + + + H+ Y + +
Sbjct: 45 ESRLDLFCNKFLIKLSPNFVSFVLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSI 104
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
D+ + ++K VF + G ++ S++ + G V+ + +W MK
Sbjct: 105 DVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVE 164
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P++ +Y + L + ++ A V + M + P+ TY +++ + GK ++A E
Sbjct: 165 PSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEK 224
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
F M+ V PDK LI+ C G+ + + M EN L P +L +
Sbjct: 225 FRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDEN--GLEIPPHAYSLVIGGL 282
Query: 254 ADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
E + + V + + N A+ D + G ++L ++
Sbjct: 283 CKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCG-NMGEAMLLFER--------- 332
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+ + ++ D ++ C R D A+ E+ + + Y +LI L K
Sbjct: 333 ---MKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGK 389
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--- 429
+ ++ EEM K G Y LI L + A F + ED+ C
Sbjct: 390 AGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRM-EDEGCDQTVY 448
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TYT +I F ++ALK++ M KGI P+ F L GL G+V+ A
Sbjct: 449 TYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARA 501
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + Y++++D G+A R+ + +FE M +KG D+ Y +++ L+ G
Sbjct: 369 RVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKT 428
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ ++ M+ + C T+ +YT + LF + +EA ++ MI +G+ P + L
Sbjct: 429 DEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRAL 488
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
L +GK A ++ ++ GV P+ A ++L CKAG +
Sbjct: 489 SIGLCLSGKVARACKLLDELAPMGVIPETAFEDML-NVLCKAGRIK 533
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 32 DSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKY 87
DSY N + L ++A FF + G + +TYT M++ +F E K ++K
Sbjct: 411 DSYCYNALIDALAKCGKTDEALAFFKRM-EDEGCDQTVYTYTIMINGLFREHKNEEALK- 468
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
++++M +KGI A + ++ L +G V A + +E+ P ++ + +L
Sbjct: 469 MWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPE-TAFEDMLNVLC 527
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
R+KEA + + RG TVL+ L +AG + AL++
Sbjct: 528 KAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKL 573
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 7/187 (3%)
Query: 305 NLVAIDS---LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
N V I+S +L + + I D +T+I+ C + A F ++ ++
Sbjct: 179 NSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKI 238
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y+ LI F + EM + G + + +L+I L + V +F +
Sbjct: 239 TYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKM 298
Query: 422 PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ + C A YTALI G+ +A+ +++ M ++G+ P + T+ V++ + K GR
Sbjct: 299 IQ-KGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGR 357
Query: 479 VSDAEIY 485
+ +A Y
Sbjct: 358 LDEAMEY 364
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 206/490 (42%), Gaps = 59/490 (12%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F + +SR F ++ +L + K+ + E M+ G++ +
Sbjct: 43 HLKLDEAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLY 101
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +++ L + A+ I +M P+IV+ + + +R+ EA + +M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++ G P+ T+T L+ L + K EA+ + +M G QPD +I CK GE
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 223 RTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISD--- 275
+ +L M++ ++ + Y ++L ++ D+ +L ++ + P+ +
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 276 ----------NDAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSI 321
+DA ++ +E ++ + L+ K+ L+ + L ++ +SI
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
+ +++I C H R D A F V D + Y LI N F K +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI------NGFCKAKK 395
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSA 441
+V+ M + R S R V T TYT LI +F A
Sbjct: 396 VVDGME--------------LFRDMSRRGLVGN-------------TVTYTTLIHGFFQA 428
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK--EKKSIQADALSK 499
D A ++K M G+HP++ T+N LL GL K G++ A + + +K ++ D +
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 500 DAVPMEEKIC 509
+ M E +C
Sbjct: 489 NI--MSEGMC 496
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 102/193 (52%), Gaps = 1/193 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F + S+ D TY T+++ F +AK++ +F M +G+ + V
Sbjct: 358 HDRLDEAQQIFTLMV-SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TYT+++H A D D A ++++M +P I++Y + L N ++++A V++ +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ + P+ YTY ++ E + +AGK E+ ++F + GV+PD A N +I CK G
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 223 RTIILILRYMKEN 235
+ MKE+
Sbjct: 537 EEAYTLFIKMKED 549
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ I + T N ++ K +E LF + RS +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS--ID 342
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
+ TY ++++ F R+ + +F LM K D VTY ++++ A V + +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ +M + V+YT + F A V+K+M+ G+ PN TY L++ L +
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK E+A+ +F +Q++ ++PD NI+ E CKAG+
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 175/436 (40%), Gaps = 18/436 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D T+TT++ + + S + E M KG D VTY +V++ L G+ D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+N+ +M+ + +V Y+ + L V +A +++ EM +G+ P+ +TY+ L+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G++ +A + S M E + P+ N LI+ K G+ + M + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F + D D S + + D V T I G
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD---VVTYNTLING-----------F 390
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K K +V L + + + ++ +T+I D A + F+ V ++
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y L+ L K K + E + K+ +Y ++ + A + +F
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-AGLEKLG 477
L + Y +I + G ++A ++ M G P GT+N L+ A L
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 478 RVSDAEIYRKEKKSIQ 493
+ + AE+ KE +S +
Sbjct: 571 KAASAELI-KEMRSCR 585
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 158/386 (40%), Gaps = 28/386 (7%)
Query: 129 LKECYPTIVSYTAYMKIL----FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
L+ Y + +SY Y + L L+ ++ EA D++ EM++ P+ ++ L+ + +
Sbjct: 19 LRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM 78
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE---------- 234
K++ + KM+ GV + NI+I C+ + + IL M +
Sbjct: 79 KKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTL 138
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQ---------VHPQFSPEFISDNDA-VEFVTT 284
N L + + + D+ + +Q VH F S+ A VE +
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
P + G V+ L K+ + +LL+ + I+ D + ST+I+ C +R D
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
AL F + + Y +LI L + + ++ +M + + V LI
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 404 RLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
+ + A K+F + + TY +LI + D+A +I+ M K P
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYR 486
+ T+N L+ G K +V D E++R
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFR 404
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + + TY T+LD + ++ VFE +Q+ + D TY + + AG V+
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ + LK P +++Y + +EA ++ +M + G P+ TY L+
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+R G + E+ +M+ C AG+ T L+ + + RL
Sbjct: 563 RAHLRDGDKAASAELIKEMRS----------------CRFAGDASTYGLVTDMLHDGRL 605
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%), Gaps = 4/227 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG + FTYT+M+D G++ + ++FE M +G+ V Y S++H L +G
Sbjct: 186 KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRA 245
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++ EM K P V++T+ + L + R EA +++E G + Y VL
Sbjct: 246 DAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVL 305
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L ++ + +EA EIF +++E G+ PD N L++ CK+G ++L MK
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGC 365
Query: 238 ALRYPVFK---EALQTFKVADENDSLLWQVHP-QFSPEFISDNDAVE 280
V+ + L+ +E LL ++ + P+ ++ N ++
Sbjct: 366 TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 177/439 (40%), Gaps = 61/439 (13%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
+KA + + +S G D +T+ +++ F +AKR+ S+ +FE MQ + + + +TY+
Sbjct: 106 QKALAVYRVMGQS-GLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSI 164
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ + G V+ A+ ++ +MK + C P I +YT+ + L + V +A +++EM G
Sbjct: 165 LIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEG 224
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L Y L+ L R+G+ + A ++F +M G+QPD L+ AG
Sbjct: 225 LVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEAR 284
Query: 227 LILRYMKENRLALR---YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
I + ++ AL Y V + L K DE W++ +
Sbjct: 285 RIFQEARDVGCALDVNLYNVLIDTLCKSKRLDE----AWEIFGELE-------------- 326
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ GLV ++ ++L+ G+ C R
Sbjct: 327 ---------EDGLV------PDVYTFNALMDGL-------------------CKSGRIHD 352
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A + + + T Y LI L K + +++ EM G+ V LI
Sbjct: 353 AFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412
Query: 404 RLGSARRPVPAAKIF-SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG---- 458
R A ++F + + T TY ++ AG D+A K++ M ++
Sbjct: 413 ESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGV 472
Query: 459 IHPSLGTFNVLLAGLEKLG 477
I P T+ LL G + G
Sbjct: 473 IDPDFVTYTTLLNGARQAG 491
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 175/439 (39%), Gaps = 22/439 (5%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A+ FF WV RG TT++++ G A+R + + V +++ + + +
Sbjct: 2 AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELA 61
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
++AG ++ +V + M+ C T +Y + + ++A VY+ M Q GL
Sbjct: 62 RGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLR 121
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ YT+ VLM +A + + ++F +MQ P+ +ILI+ CK G + +
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKV 181
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
MK R +F D L H + + + V T +
Sbjct: 182 FLDMKSR--GCRPNIFTYTSMI-------DGLGKSGHVDKAFFLFEEMTSEGLVATRV-- 230
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+ L+ L + A L ++ K +Q D ++++ R A F
Sbjct: 231 ---VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIF 287
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ + + L+ Y LI L K + EI E+ + G VY L+ L +
Sbjct: 288 QEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKS 347
Query: 409 RRPVPAAKIFSLLPEDQKCTAT-----YTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
R A F LL + ++ T Y LI +G ++A ++ M G P +
Sbjct: 348 GRIHDA---FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDV 404
Query: 464 GTFNVLLAGLEKLGRVSDA 482
T+N L+ K GR+ DA
Sbjct: 405 VTYNTLIDESCKGGRIEDA 423
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 123/310 (39%), Gaps = 30/310 (9%)
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
AG E+++E +M+ +A N LI+ KAG T+ + + R M ++ L
Sbjct: 67 AGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYT 126
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD-IEGPLSIDQGLVLILLK 302
F + FK A DS+ W++ + + S N + D + +++ L + L
Sbjct: 127 FNVLMNAFKKAKRVDSV-WKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDM 185
Query: 303 KK-----NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K N+ S++ G + KS +D A FE L
Sbjct: 186 KSRGCRPNIFTYTSMIDG-LGKSGHVDKA------------------FFLFEEMTSEGLV 226
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
R Y +LI L + A++ EM G L++ LG A R A +I
Sbjct: 227 ATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI 286
Query: 418 FSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
F D C Y LI + D+A +I+ + G+ P + TFN L+ GL
Sbjct: 287 FQE-ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLC 345
Query: 475 KLGRVSDAEI 484
K GR+ DA I
Sbjct: 346 KSGRIHDAFI 355
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 3/180 (1%)
Query: 316 IMDKS-IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+M +S ++ D+ + ++ +R D FE + + Y LI + K
Sbjct: 114 VMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCG 173
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYT 432
K ++ +M G ++ +I LG + A +F + + Y
Sbjct: 174 GVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYN 233
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
+LI +G AD A K+++ M KG+ P TF L+ GL GR S+A +E + +
Sbjct: 234 SLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV 293
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 200/492 (40%), Gaps = 30/492 (6%)
Query: 11 ILKYSTWDSAQDLL---KNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNH 64
+++ + WD A+ + + + + T N ++K +KA NW+ +GF+
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM-WEQGFSP 182
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F+Y T+++ + +S +F+ M E+G+ D Y ++ GD+ A IW
Sbjct: 183 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 242
Query: 125 EEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
E + K YP I SY + L + E+ +++ M + + YTY+ L+ L
Sbjct: 243 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN--RLALRY 241
+G + A ++ +M E GV PD N ++ +AG + + + M++ R + Y
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ L DE S +W++ P+ + + +T + LV L
Sbjct: 363 NILIRGLFENAKVDEAIS-IWELLPE-------KDCCADSMTYGV---------LVHGLC 405
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K L S+L + LD+ S++I C R D + K
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA-AKIFSL 420
A+I ++ + M G V LI+ L A R A A + +
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525
Query: 421 LPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L + K TY+ L+ D AL ++ KG P + N+++ GL G+V
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585
Query: 480 SDA-EIYRKEKK 490
DA ++Y + K+
Sbjct: 586 EDALQLYSEMKQ 597
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y++M++ R+ + V + M + G + +V++ A ++ A+ +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M K C+PT+V+Y + L +R EA + KEM+ +G PN TY++LM L +
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
K + AL ++ + E G +PD NI+I C +G+ + + MK+ +
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 245 KEALQTF-KVAD-ENDSLLWQVHPQFSPE 271
++ F KV D E S +W Q+ P+
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQ 636
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 46 MEKAWLFF-NWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
+E A FF N VS+ G TY T+++ +A+R S + + M KG + +TY
Sbjct: 480 LEDALRFFGNMVSK--GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+ +M+ L +D A+N+W + K P + + + L + +V++A +Y EM Q
Sbjct: 538 SLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ 597
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
R PN T+ LME + +E A +I+ + + G QPD + NI ++ C
Sbjct: 598 RKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSC 652
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 193/490 (39%), Gaps = 39/490 (7%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V ++LK+ A F+ V+R G++H + + +L + K ++ + + EL++ +
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQ 72
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKE 154
+V+ + D A++I++ M ++ C P I SY + + L +++ E
Sbjct: 73 KCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDE 132
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A + GL PN TY +L++ R ++++A E+ + M E G PD + LI
Sbjct: 133 AESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN 192
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQT-FKVAD-ENDSLLWQ---VHPQFS 269
K G + + M E + + + FK D N S +W+ P
Sbjct: 193 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY 252
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
P S N + + + D+ + KKN D S
Sbjct: 253 PNIPSYNVMINGLCKCGK----FDESFEIWHRMKKN--------------ERGQDLYTYS 294
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
T+I C DGA ++ + ++ + Y ++ ++ + E+ + M K
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKA 447
G V +LI L + A I+ LLPE C + TY L+ G +KA
Sbjct: 355 GCRTVVSYN-ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413
Query: 448 LKIYKTMCRKGIHPSLGTF--NVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
L I + + L TF + ++ GL + GR+ + + D ++K
Sbjct: 414 LSILEEA--ENGRGDLDTFAYSSMINGLCREGRLDEV--------AGVLDQMTKHGCKPN 463
Query: 506 EKICDLLYGG 515
+C+ + G
Sbjct: 464 PHVCNAVING 473
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 78/154 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G+ + TY+ +++ + K++ ++ EKG D + ++H L ++G V+
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ EMK ++C P +V++ M+ + + A+ ++ ++Q G P+ +Y + ++
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLK 647
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L + +A+ + + GV P NIL+
Sbjct: 648 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 170/420 (40%), Gaps = 55/420 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T M+D +A+R+ +FE + K DAVTY S++ L G VD A ++E+M
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P V YT+ ++ F R ++ +Y EM++ G P+ M+ + +AG+
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEI 565
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
E+ +F +++ G PD + ILI KAG + MKE L +
Sbjct: 566 EKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTV 625
Query: 248 LQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ F K N + +Q+ +E + T P + G V+ L
Sbjct: 626 IDGFCKSGKVNKA--YQL--------------LEEMKTKGHEPTVVTYGSVI-----DGL 664
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
ID R D A + FE + + L Y +L
Sbjct: 665 AKID-----------------------------RLDEAYMLFEEAKSKGIELNVVIYSSL 695
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I K+ + I+EE+ + G + VY L+ L A A F + +D K
Sbjct: 696 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSM-KDLK 754
Query: 427 CTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
CT TY+ LI +KA ++ M ++G P++ T+ +++GL K G + +A+
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEAD 814
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 201/444 (45%), Gaps = 33/444 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S D Y +D FG+A ++ F M+ G+ +D VTYTS++ L A +
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRL 321
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ AV ++E M + P +Y + + + ++A + + ++G P+ +Y +
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L R G+ +EAL+ F +M++ + P+ + NI+I+ CKAG+ T +++ MK+ L
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGL 440
Query: 238 ---ALRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ + + L + D+ S+ + H P DAV + + IEG
Sbjct: 441 FPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP------DAVTYCSL-IEG----- 488
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN---CDHRRRDGALLAFEY 350
L + + L ++D + Q+ +AV+ T + N C R+ DG + +
Sbjct: 489 ------LGRHGRVDEAYKLYEQMLDAN-QIPNAVVYTSLIRNFFKCG-RKEDGHKI-YNE 539
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+++ + + + + K K + +E+ G +LIH L A
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599
Query: 411 PVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A ++F + E Q C T Y +I + +G +KA ++ + M KG P++ T+
Sbjct: 600 AHEAYELFYTMKE-QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 468 VLLAGLEKLGRVSDAEIYRKEKKS 491
++ GL K+ R+ +A + +E KS
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKS 682
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 154/354 (43%), Gaps = 26/354 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EK F + ++ GF D +YT ++ +A +F M+E+G +D Y
Sbjct: 565 IEKGRALFQEI-KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+V+ +G V+ A + EEMK K PT+V+Y + + L DR+ EA +++E +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ N Y+ L++ + G+ +EA I ++ + G+ P+ N L++ KA E
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 226 ILILRYMKENRLALRYPVFKEALQTF-KVADENDS-LLWQVHPQ--FSPEFISDNDAVEF 281
++ + MK+ + Y + + K+ N + + WQ + F P +
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFT------- 796
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
TT I G L K N+V D+L +K DSA+ + IIE + R
Sbjct: 797 YTTMISG-----------LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRA 845
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK---VAEIVEEMTKAGHS 392
A FE + ++ + L+ L K + V ++ E KA H+
Sbjct: 846 SDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHA 899
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 200/498 (40%), Gaps = 77/498 (15%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW FF+ + ++ G D TYT+M+ + +A R++ +FE M + A Y
Sbjct: 286 VDMAWKFFHEM-KANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYN 344
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ AG + A ++ E + K C P++VSY + L +V EA ++EM +
Sbjct: 345 TMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKD 404
Query: 166 GLP----------------------------------PNCYTYTVLMEYLVRAGKYEEAL 191
+P PN T ++++ L +A + ++A
Sbjct: 405 AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
IF + +PD LIE + G + M + V+ ++ F
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 252 -KVADENDSLLWQVHPQF-----SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
K + D +++ + SP+ + N ++ V E I++G L + KN
Sbjct: 525 FKCGRKEDG--HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE----IEKGRAL-FQEIKN 577
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE--YSVK-MDLNLERTA 362
L I S + +I +++ H A+E Y++K L+ A
Sbjct: 578 LGFIPDARSYTI---------LIHGLVKAGFAHE-------AYELFYTMKEQGCVLDTRA 621
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y +I K K +++EEM GH V +I L R A +F
Sbjct: 622 YNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLF---- 677
Query: 423 EDQKCTAT------YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
E+ K Y++LI + G D+A I + + +KG+ P++ T+N LL L K
Sbjct: 678 EEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 737
Query: 477 GRVSDAEIYRKEKKSIQA 494
+S+A + + K ++
Sbjct: 738 EEISEALVCFQSMKDLKC 755
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 102/547 (18%), Positives = 193/547 (35%), Gaps = 89/547 (16%)
Query: 2 RDTISNVYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
R I +V +IL+ W S+ ++ L L + + V VL+ + A +F W R
Sbjct: 65 RQVIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVNNAVNYFRWAERLT 124
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVT----------------- 103
H R Y ++L + ++ + ++ + E M G T
Sbjct: 125 DRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREA 184
Query: 104 ------------------YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
YT+++ LS + D D + ++++M+ + +T +++
Sbjct: 185 FTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRV 244
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
RV A + EM L P+ Y V ++ +AGK + A + F +M+ G+ D
Sbjct: 245 FAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLD 304
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
+I CKA + + +M +N+ + + + +A + + +
Sbjct: 305 DVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLE 364
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN--------------LVAIDS 311
Q I + + + + +D+ L KK+ L
Sbjct: 365 RQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGK 424
Query: 312 LLSGIMDKSIQLDSAVISTIIEVN------CDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
L + ++ + D+ + +I VN C +R D A FE + Y +
Sbjct: 425 LETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCS 484
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
LI L + + ++ E+M A +P A +
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQ--------------------IPNAVV-------- 516
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
YT+LI +F G + KIY M R G P L N + + K G +
Sbjct: 517 -----YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 486 RKEKKSI 492
+E K++
Sbjct: 572 FQEIKNL 578
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 186/447 (41%), Gaps = 55/447 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D Y T+++ F ++ +F M ++GI + VTYT+V+ L A VD A
Sbjct: 156 GCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRA 215
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++M + P +Y + + KE + +EM GL P+C TY +L++Y
Sbjct: 216 KGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDY 275
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + G+ EA F M G++PD A IL+ G + L M N ++
Sbjct: 276 LCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPN 335
Query: 241 YPVFKEALQTF---KVADENDSLLWQVHPQ-FSPEFIS--------------DNDAVEFV 282
+F + + +E + ++ Q SP+ +S D+ ++F
Sbjct: 336 RRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFN 395
Query: 283 TTDIEG---PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
EG + + LV L + L ++D+ I +D+ +T++ C+
Sbjct: 396 QMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEG 455
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R + +R LI ++I++ P V I AGH
Sbjct: 456 RV--------------MEAQR-----LIDLMIRVGVRPNV--ISYNTLVAGHC------- 487
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L R+ A + + L P + TYT L+ Y A D A +++ M KG+
Sbjct: 488 -LTGRIDEAAKLLDVMVSNGLKPNE----FTYTILLRGYCKARRVDDAYSLFREMLMKGV 542
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA-EIY 485
P + T+N +L GL + GR S+A E+Y
Sbjct: 543 TPVVATYNTILHGLFQTGRFSEANELY 569
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 114/519 (21%), Positives = 208/519 (40%), Gaps = 87/519 (16%)
Query: 46 MEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
+EKA+ LF + + G + TYTT++D +A+ + K VF+ M ++G+ D TY
Sbjct: 177 VEKAYNLFLEMMDQ--GIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTY 234
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++H + G V + EEM P ++Y + L N R +EA + M +
Sbjct: 235 NCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFR 294
Query: 165 RGLPPNCYTYTVLMEYLVRAGKY-----------------------------------EE 189
+G+ P+ Y +L+ G EE
Sbjct: 295 KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEE 354
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE--- 246
A+ IF+KM++ G+ PD + LI+ CK G +L M + VF
Sbjct: 355 AMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVY 414
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI----EGPLSIDQGLVLILLK 302
L T ++ + L ++V Q DAV F T EG + Q L+ ++++
Sbjct: 415 GLCTVGKWEKAEELFFEVLDQGICV-----DAVFFNTLMCNLCNEGRVMEAQRLIDLMIR 469
Query: 303 ---KKNLVAIDSL-----LSGIMDKSIQLDSAVISTIIEVN-----------CDHRRRDG 343
+ N+++ ++L L+G +D++ +L ++S ++ N C RR D
Sbjct: 470 VGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDD 529
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A F + + Y ++ L + F + E+ M + +Y ++++
Sbjct: 530 AYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILN 589
Query: 404 RLGSARRPVPAAKIFSLL--PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L A K+F L + Q + T+ +IG G + A+ ++ T+ G+ P
Sbjct: 590 GLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVP 649
Query: 462 ----------------SLGTFNVLLAGLEKLGRVSDAEI 484
SLG F+ L + +EK G ++ +
Sbjct: 650 DVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHM 688
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 194/444 (43%), Gaps = 34/444 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ ++ F R+ F L+ + G ++ + + ++ L +A VD A +I +
Sbjct: 92 TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL-L 150
Query: 128 KLKE--CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
++ E C P +V+Y + F +V++A +++ EM+ +G+PPN TYT +++ L +A
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII------------------- 226
+ A +F +M + GV+PD N LI G+ + ++
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV--HPQFSPEFISDNDAVEFVTT 284
L+L Y+ +N +F +++ F+ + D ++ + H + +S+ + F+
Sbjct: 271 LLLDYLCKNGRCREARLFFDSM--FRKGIKPDVAIYAILLHGYATKGALSEMHS--FLDL 326
Query: 285 DIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+ +S ++ + I+ KK + + + + + + D +I+ C R
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D A+L F + + + +L+ L + + K E+ E+ G +
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446
Query: 401 LIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
L+ L + R + A ++ L+ + +Y L+ + G D+A K+ M G
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG 506
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
+ P+ T+ +LL G K RV DA
Sbjct: 507 LKPNEFTYTILLRGYCKARRVDDA 530
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 94/248 (37%), Gaps = 41/248 (16%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD-- 116
S G + FTYT +L + +A+R+ +F M KG+ TY +++H L G
Sbjct: 504 SNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFS 563
Query: 117 ---------------------------------VDGAVNIWEEMKLKECYPTIVSYTAYM 143
VD A ++ + K+ V++ +
Sbjct: 564 EANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMI 623
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
L R ++A D++ + GL P+ TY ++ E L+ G E +FS M+++G
Sbjct: 624 GALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTA 683
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
P+ N L+ + G+ + L + E +L + + + +Q
Sbjct: 684 PNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGE------YQ 737
Query: 264 VHPQFSPE 271
H + PE
Sbjct: 738 PHAKSLPE 745
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 146/367 (39%), Gaps = 29/367 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A FN + R +G + D ++ ++D + R+ F M +G+ + ++
Sbjct: 352 IEEAMHIFNKM-RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFS 410
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+++ L G + A ++ E+ + V + M L RV EA + MI+
Sbjct: 411 SLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRV 470
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN +Y L+ G+ +EA ++ M G++P++ IL+ CKA
Sbjct: 471 GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKA------ 524
Query: 226 ILILRYMKENRLALRYPVFKEALQ---TFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
R+ Y +F+E L T VA N L H F S +A E
Sbjct: 525 ---------RRVDDAYSLFREMLMKGVTPVVATYNTIL----HGLFQTGRFS--EANELY 569
Query: 283 TTDIEGPLSID---QGLVLILLKKKNLV-AIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
I D ++L L K N V + + K QLDS + +I
Sbjct: 570 LNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKG 629
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R++ A+ F L + Y + LI+ + + + M K+G + ++
Sbjct: 630 GRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHML 689
Query: 399 ALLIHRL 405
L+ RL
Sbjct: 690 NALVRRL 696
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 180/420 (42%), Gaps = 38/420 (9%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++ ++ + + + M+E GI+ Y S+MH + D + ++E +
Sbjct: 377 YSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFE--R 434
Query: 129 LKEC--YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
LKEC P+I+SY + + +V +A + KEM G+ N TY++L+ +
Sbjct: 435 LKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHD 494
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A IF +M ++G+QPD+A N+LIE CK G I IL M++ R+ F+
Sbjct: 495 FANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 554
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID-QGLVLILLKKKN 305
++ F VA + L + ++ + P + L+ L+KK
Sbjct: 555 IIEGFAVAGDMKRAL---------------NILDLMRRSGCAPTVMTYNALIHGLIKKNQ 599
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIE---VNCDHRRRDGALLAFEYSVKMD---LNLE 359
+ S+L+ + I + + I+ N D + AFEY K+ L L+
Sbjct: 600 VERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGK------AFEYFTKIKEGGLKLD 653
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP--VPAAKI 417
Y L+ K + EM+ + ++ +LI G ARR AA +
Sbjct: 654 VYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILID--GWARRGDVWEAADL 711
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ ED TYT+ I AG +A K+ + M G+ P+L T+ L+ G K
Sbjct: 712 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAK 771
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 91/178 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR Y +++ F + + + E MQ++ + + ++ + AGD+ A
Sbjct: 509 GLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRA 568
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+NI + M+ C PT+++Y A + L ++V+ A V +M G+ PN +TYT++M
Sbjct: 569 LNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRG 628
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G +A E F+K++E G++ D L+ CCK+G ++ + + R M ++A
Sbjct: 629 YAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIA 686
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ +F + G D + Y T+L ++ R+ S V M + I + Y +
Sbjct: 637 KAFEYFTKIKEG-GLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNIL 695
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + GDV A ++ ++MK P I +YT+Y+ ++ A V +EM GL
Sbjct: 696 IDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGL 755
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGET 222
PN TYT L++ +A + AL+ F +M+ AG++PD+AA + L+ G T
Sbjct: 756 KPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGST 815
Query: 223 RTIIL-ILRYMKENRLAL 239
T IL I R M EN L +
Sbjct: 816 YTGILSICREMFENDLTV 833
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 87/192 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G H+ TY+ ++ F ++ +FE M + G+ D Y ++ G++D
Sbjct: 472 SYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMD 531
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I E+M+ + P+ ++ ++ + +K A ++ M + G P TY L+
Sbjct: 532 RAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALI 591
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L++ + E A+ + +KM AG+ P++ I++ G+ +KE L
Sbjct: 592 HGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLK 651
Query: 239 LRYPVFKEALQT 250
L +++ L+
Sbjct: 652 LDVYIYETLLRA 663
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 186/450 (41%), Gaps = 49/450 (10%)
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ FE M+ +GI +A +TS++H + A D+ G ++ EEMK + TIV+Y+ +
Sbjct: 289 RATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAG 348
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP- 204
+ + A +++KE + N Y+ ++ ++G + A E+ +M+E G+
Sbjct: 349 FAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAP 408
Query: 205 ---------------DKAACNILIEKCCKAGETRTII----LILRYMKENRLALRYPVFK 245
D+ C I+ E+ + T +II LI Y+K ++ + K
Sbjct: 409 IDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISK 468
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAV-------EFVTTDIEGPLSIDQGLVL 298
E ++++ + N + + FI +D E + + ++ +I L+
Sbjct: 469 E-MESYGIKHNN-----KTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIE 522
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE---VNCDHRRRDGALLAFEYSVKMD 355
K N+ +L + + +Q + IIE V D +R AL + +
Sbjct: 523 AFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKR---ALNILDLMRRSG 579
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
Y ALI LIK N + ++ +M+ AG + + +++ + A
Sbjct: 580 CAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAF 639
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ F+ + E + Y L+ +G AL + + M + I + +N+L+ G
Sbjct: 640 EYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGW 699
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
+ G V +A K+ K +D VP
Sbjct: 700 ARRGDVWEAADLMKQMK--------EDGVP 721
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A + + RS G TY ++ + ++ V M GI + TYT
Sbjct: 565 MKRALNILDLMRRS-GCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYT 623
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+M + GD+ A + ++K + Y ++ + R++ A V +EM +
Sbjct: 624 IIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQ 683
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ N + Y +L++ R G EA ++ +M+E GV P+ I CCKAG+ +
Sbjct: 684 KIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRA 743
Query: 226 ILILRYMKE 234
++ M +
Sbjct: 744 QKVIEEMAD 752
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 135/344 (39%), Gaps = 42/344 (12%)
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
A ++ M RG+ PN + +T L+ A L +M+ G++ +I+I
Sbjct: 287 HARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIII 346
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND---SLLWQVHPQFSP 270
K + ++ +N +FKEA K+ D N S + H Q
Sbjct: 347 AGFAKINDAQSA--------DN-------LFKEA--KAKLGDLNGIIYSNIIHAHCQSGN 389
Query: 271 EFISDNDAVEFVTTDIEGPL----SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
++ E I+ P+ S+ G +I +KK L+ + L SI
Sbjct: 390 MDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGC 449
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIV 383
+I+ I++ A S +M+ + Y LI I L+ F I
Sbjct: 450 LINLYIKIG-------KVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIF 502
Query: 384 EEMTKAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVY 438
EEM K+G + LLI ++G+ R A +I + ++ Q + +I +
Sbjct: 503 EEMLKSGLQPDRAIYNLLIEAFCKMGNMDR---AIRILEKMQKERMQPSNRAFRPIIEGF 559
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
AG +AL I M R G P++ T+N L+ GL K +V A
Sbjct: 560 AVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERA 603
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/426 (19%), Positives = 161/426 (37%), Gaps = 63/426 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +++++ + +++ + + M+ GI + TY+ ++ + D A +I+E
Sbjct: 446 SYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFE-- 503
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
EM++ GL P+ Y +L+E + G
Sbjct: 504 ---------------------------------EMLKSGLQPDRAIYNLLIEAFCKMGNM 530
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ A+ I KMQ+ +QP A +IE AG+ + + IL M+ + A +
Sbjct: 531 DRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNAL 590
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG-PLSIDQGLVLILLKKKNL 306
+ ++ + + V + S I+ N+ T + G + D G K
Sbjct: 591 IHGLIKKNQVERAV-SVLNKMSIAGITPNEHT--YTIIMRGYAANGDIGKAFEYFTK--- 644
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
I + ++LD + T++ C R AL + Y L
Sbjct: 645 ---------IKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNIL 695
Query: 367 IGILIKLNTFPKVAEIVEEMTKAG-----HSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
I + + A+++++M + G H+ Y+ A + G +R A K+ +
Sbjct: 696 IDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACC--KAGDMQR---AQKVIEEM 750
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ + TYT LI + A D+ALK ++ M G+ P ++ L+ L V
Sbjct: 751 ADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATV 810
Query: 480 SDAEIY 485
+ Y
Sbjct: 811 MEGSTY 816
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 190/453 (41%), Gaps = 32/453 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D TY +++ F + R+ F M+ +G+ + VT+++ + G V
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMV 315
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ ++ +M++K P V+YT + R+ +A + EM+Q+G+P N TYTVL
Sbjct: 316 REAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVL 375
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L + GK EA ++F M+ AG++ ++ LI + + +L MK+ +
Sbjct: 376 VDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435
Query: 238 ALRYPVFKE---ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
L ++ L + DE SLL ++ D ++ I
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKM------------DECGLKPNNV-----IYT 478
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++ K + +LL +MD + + +++ C D A+ F V +
Sbjct: 479 NIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDL 538
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL-GVYLGALLIHRLGSARR--- 410
L AY AL+ L K K +++EM G SL V +L+ L
Sbjct: 539 GLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDA 598
Query: 411 -PVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
+ A I S L D YT + + + +A ++ M GI P +N L
Sbjct: 599 FALKAKMINSGLQLD---LYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCL 655
Query: 470 LAGLEKLGRVSDAEIYRKEKKSI----QADALS 498
+ +KLG + +A I + E +S+ ADA S
Sbjct: 656 INKCQKLGNMEEAAILQNEMESLLSCTNADAAS 688
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 100/512 (19%), Positives = 197/512 (38%), Gaps = 67/512 (13%)
Query: 40 LKTHPPMEKAWLFF--NWVSRSRGFNHDRFTYTTML-------------DIFGEAK---- 80
L +HP A L + ++R+R F H R + +L D+ A
Sbjct: 62 LLSHPLPSSAHLCLAAHILARARLFPHSRSLLSRLLAPGHHPHLAASLVDLLHRAALALG 121
Query: 81 -RISSMKYVFE----LMQEKGINIDAV----------------TYTSVMHWLSNAGDVDG 119
R S++ V + L+ ++G+ DAV T ++ L+ +
Sbjct: 122 PRRSALPSVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSEL 181
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E++ P + ++ + L + EA + M G P+ TY L++
Sbjct: 182 AWRLFEQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLID 237
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ G+ EE ++ +M+ G +PD N L+ CK G MK +
Sbjct: 238 GYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMA 297
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISD-------------NDAVEFV 282
+ + F +A + E L Q+ + P ++ +DA+
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLT 357
Query: 283 TTDIEG--PLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
++ PL++ VL+ L K+ + + + + I+ + + +T+I + +
Sbjct: 358 NEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVY 417
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ + AL + L+ + Y ALI L L + ++ +M + G +
Sbjct: 418 KNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIY 477
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
++ AR+ A + + + + TY AL+ AGS D+A+ + M
Sbjct: 478 TNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVD 537
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G+ P++ + L+ GL K GR+ A + E
Sbjct: 538 LGLEPNVQAYTALVDGLCKNGRLDKAVLLLDE 569
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 192/453 (42%), Gaps = 43/453 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG + F + ++ + R+ +F+ M +G+ D V YTS+M AG
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A NI +EM K +V+Y + LF + E+ + M Q GL P+ T+ +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTM 442
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + G AL++ ++M+ G++P+ CNIL+++ C AGE + +L M L
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDM----L 498
Query: 238 ALRY---PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + P +A+ ++ H Q V ++ LS
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHXHDQL-------------VGMGVKLDLSTYN 545
Query: 295 GLV-----LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
L+ L ++++ LV D + GI+ I ++ + I H ++ A+ +
Sbjct: 546 TLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCIS---SHLKKAFAVHSQM 602
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ + N+E Y L+G L + A +V +M + G +L+ G
Sbjct: 603 LTEGVSPNVE--TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIG 660
Query: 410 RPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
K++ +P+ T TY LI + +A ++ + M +GI P+
Sbjct: 661 NMKECVKLYCEMITKGFVPK----TRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNS 716
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADA 496
T+++L+ G KL + E+ + K+S QA+A
Sbjct: 717 STYDILICGWYKLSK--QPELNKSLKRSYQAEA 747
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 180/422 (42%), Gaps = 33/422 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++D + +++ + Y+++ M K + D VTYT +M+ L +G V+ A +++ EM
Sbjct: 89 TYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREM 148
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P SY + LF V EA + M+ RG+ + YT LM+ L +AG
Sbjct: 149 EEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMA 208
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
A ++F + E + P+ + LI+ CK G+ L+L+ M+E + V+
Sbjct: 209 NNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSI 268
Query: 248 LQTFK----VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ-GLVLILLK 302
+ + + + D + V P V T I+G DQ G+ L L K
Sbjct: 269 VDGYTKKGLLNEAMDVMRKMVQRNILPN-------VFVYGTLIDGYFKADQRGIALDLFK 321
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+ + + ++ ++ VI + + R + A F+ + L +R
Sbjct: 322 E------------MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RLGSARRPV--PAAKI 417
Y +++ K I +EMT+ V +LI+ +LG +
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQ 429
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L P+ +AT+ +I Y G+ ALK+ M G+ P+ T N+L+ L G
Sbjct: 430 LGLAPD----SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG 485
Query: 478 RV 479
+
Sbjct: 486 EI 487
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 180/423 (42%), Gaps = 38/423 (8%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++D + IS + E M+ +G D VTY ++M+ GD+ A + E+
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
L P +++YT + + +++A +Y EM + L P+ TYT +M L ++GK E
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA +F +M+E GV P++ + LI+ K G ++ + R+ +R F +
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVL-----QGRMVVRGIGFDVVV 194
Query: 249 QT------FKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
T FK N++ ++QV + S V + ID L +
Sbjct: 195 YTALMDGLFKAGMANNAEDMFQVLLEES-----------LVPNCVTYSALIDGHCKLGDV 243
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K L LL + +K I + V S+I++ + A+ V+ ++
Sbjct: 244 NKGEL-----LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF--- 418
Y LI K + ++ +EM G ++ ++ L + R A ++F
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358
Query: 419 ---SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
LLP+ YT+++ +F AG A I + M K + +NVL+ GL K
Sbjct: 359 MSRGLLPD----RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFK 414
Query: 476 LGR 478
LG+
Sbjct: 415 LGK 417
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 210/509 (41%), Gaps = 80/509 (15%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D YT ++D +A ++ + +F+++ E+ + + VTY++++ GDV+
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNK 245
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +EM+ K +P ++ Y++ + + EA DV ++M+QR + PN + Y L++
Sbjct: 246 GELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305
Query: 180 -----------------------------------YLVRAGKYEEALEIFSKMQEAGVQP 204
L R+G+ EEA E+F M G+ P
Sbjct: 306 GYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLP 365
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVAD-ENDSL 260
D+ +++ KAG+ I + M E + Y V L FK+ E++S
Sbjct: 366 DRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGL--FKLGKYESESF 423
Query: 261 LWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK-------KKNLVAIDSL 312
+ +P+ + N + EG L G L LL K N + + L
Sbjct: 424 HTGMRQLGLAPDSATFNTMINAYCK--EGNL----GNALKLLNEMKSYGLKPNSITCNIL 477
Query: 313 L-----SGIMDKSIQL--DSAVIS---------TIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ +G ++K++ L D V+ +++ + RR D L + V M +
Sbjct: 478 VQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGV 537
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
L+ + Y LI +L + + ++M G + LIH + A
Sbjct: 538 KLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFA 597
Query: 417 IFS-LLPED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ S +L E TY L+G +A +A + M +G+ P+ T+++L++G
Sbjct: 598 VHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHG 657
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAVP 503
K+G + KE + + ++K VP
Sbjct: 658 KIGNM-------KECVKLYCEMITKGFVP 679
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 21 QDLLKNLPIKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
D L + +K D T N ++ T + +A L F + +G D TY ++ +
Sbjct: 529 HDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM-MGKGILADIITYNALIHGYC 587
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ + V M +G++ + TY ++ LS A + A + +MK + P
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647
Query: 138 SY----TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
+Y + + KI +KE +Y EMI +G P TY VL+ + K +A E+
Sbjct: 648 TYDILVSGHGKI----GNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Query: 194 FSKMQEAGVQPDKAACNILI 213
+MQ G+ P+ + +ILI
Sbjct: 704 MQEMQVRGIPPNSSTYDILI 723
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 14/165 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + + TY +L A+ I + M+E+G+ +A TY ++ G++
Sbjct: 604 TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMK 663
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL- 177
V ++ EM K P +Y + ++ +A ++ +EM RG+PPN TY +L
Sbjct: 664 ECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723
Query: 178 -----------MEYLVRAGKYEEALEIFSKMQEAGVQP--DKAAC 209
+ ++ EA +F +M E G P + AC
Sbjct: 724 CGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLAC 768
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 71/165 (43%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F+ R G D T+ TM++ + + + + + M+ G+ +++T ++ L
Sbjct: 423 FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLC 482
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG+++ +++ +M + +PT ++ A + + R + +++ G+ +
Sbjct: 483 AAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLS 542
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
TY L+ R G A +F M G+ D N LI C
Sbjct: 543 TYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 206/487 (42%), Gaps = 63/487 (12%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ K+ YST S + + + + YT+N ++ + + + F+ +++ H
Sbjct: 63 LTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGH 122
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I ++F+ M ++G + VTY ++++ L G+ A+
Sbjct: 123 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 182
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M+ C P +V YT+ + L + +V EA +++ +M+ +G+ P+ +TYT L+ L
Sbjct: 183 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 242
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+++ + ++M + + PD + +++ CK G+ I+ M + +
Sbjct: 243 NLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV 302
Query: 243 VFKEALQTFKVADENDSLL----WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ + + E D + V F+P+ IS TT I G I +
Sbjct: 303 TYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS-------YTTLINGYCKIHK---- 351
Query: 299 ILLKKKNLVAIDS---LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
ID L + K D+ +T++ C R A+ F V
Sbjct: 352 ----------IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVA-- 399
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
R L+ I L++ K + E M ALL A
Sbjct: 400 ----RGQMPDLVTYSILLDSLCKNCHLEEAM------------ALL-----------KAI 432
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ +L P+ Q Y +I AG + A ++ + KG+HPS+ T+N+++ GL K
Sbjct: 433 EASNLNPDIQ----VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCK 488
Query: 476 LGRVSDA 482
G +++A
Sbjct: 489 RGLLNEA 495
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 39/249 (15%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++ ++ D T ++ H M++A F+ + R +GF D +YTT+++ + +
Sbjct: 290 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR-KGFAPDVISYTTLINGYCK 348
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+I Y+FE M K D TY ++MH L + G + A+ ++ EM + P +V+
Sbjct: 349 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVT 408
Query: 139 YTAYMKILFLNDRVKEAT-----------------------------------DVYKEMI 163
Y+ + L N ++EA D++ +
Sbjct: 409 YSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 468
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+GL P+ +TY +++ L + G EA ++F +M PD N + + ET
Sbjct: 469 SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 528
Query: 224 TIILILRYM 232
I +L M
Sbjct: 529 RAIQLLEEM 537
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D TY+ +LD + + + + ++ +N D Y ++ + AG+++
Sbjct: 399 ARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 458
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + K +P++ +Y + L + EA ++ EM P+ TY +
Sbjct: 459 AARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIA 518
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG-ETRTIILILRYMKENRL 237
++ + A+++ +M G D + +L+E G + + L+L + E+
Sbjct: 519 RGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSEDD- 577
Query: 238 ALRYPVF 244
RY +F
Sbjct: 578 -RRYFIF 583
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 200/492 (40%), Gaps = 30/492 (6%)
Query: 11 ILKYSTWDSAQDLL---KNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNH 64
+++ + WD A+ + + + + T N ++K +KA NW+ +GF+
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM-WEQGFSP 182
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F+Y T+++ + +S +F+ M E+G+ D Y ++ GD+ A IW
Sbjct: 183 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 242
Query: 125 EEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
E + K YP I SY + L + E+ +++ M + + YTY+ L+ L
Sbjct: 243 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN--RLALRY 241
+G + A ++ +M E GV PD N ++ +AG + + + M++ R + Y
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ L DE S +W++ P+ + + +T + LV L
Sbjct: 363 NILIRGLFENAKVDEAIS-IWELLPE-------KDCCADSMTYGV---------LVHGLC 405
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K L S+L + LD+ S++I C R D + K
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA-AKIFSL 420
A+I ++ + M G V LI+ L A R A A + +
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525
Query: 421 LPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L + K TY+ L+ D AL ++ KG P + N+++ GL G+V
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585
Query: 480 SDA-EIYRKEKK 490
DA ++Y + K+
Sbjct: 586 EDALQLYSEMKQ 597
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 2/200 (1%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y++M++ R+ + V + M + G + +V++ A ++ A+ +
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M K C+PT+V+Y + L +R EA + KEM+ +G PN TY++LM L +
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
K + AL ++ + E G +PD NI+I C +G+ + + MK+ +
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 245 KEALQTF-KVAD-ENDSLLW 262
++ F KV D E S +W
Sbjct: 608 NTLMEGFYKVRDFERASKIW 627
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 193/490 (39%), Gaps = 39/490 (7%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V ++LK+ A F+ V+R G++H + + +L + K ++ + + EL++ +
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQ 72
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKE 154
+V+ + D A++I++ M ++ C P I SY + + L +++ E
Sbjct: 73 KCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDE 132
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A + GL PN TY +L++ R ++++A E+ + M E G PD + LI
Sbjct: 133 AESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN 192
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQT-FKVAD-ENDSLLWQ---VHPQFS 269
K G + + M E + + + FK D N S +W+ P
Sbjct: 193 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVY 252
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
P S N + + + D+ + KKN D S
Sbjct: 253 PNIPSYNVMINGLCKCGK----FDESFEIWHRMKKNERGQDLY--------------TYS 294
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
T+I C DGA ++ + ++ + Y ++ ++ + E+ + M K
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKA 447
G V +LI L + A I+ LLPE C + TY L+ G +KA
Sbjct: 355 GCRTVVSYN-ILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413
Query: 448 LKIYKTMCRKGIHPSLGTF--NVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
L I + + L TF + ++ GL + GR+ + + D ++K
Sbjct: 414 LSILEEA--ENGRGDLDTFAYSSMINGLCREGRLDEV--------AGVLDQMTKHGCKPN 463
Query: 506 EKICDLLYGG 515
+C+ + G
Sbjct: 464 PHVCNAVING 473
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 46 MEKAWLFF-NWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
+E A FF N VS+ G TY T+++ +A+R S + + M KG + +TY
Sbjct: 480 LEDALRFFGNMVSK--GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+ +M+ L +D A+N+W + K P + + + L + +V++A +Y EM Q
Sbjct: 538 SLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ 597
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
R PN T+ LME + +E A +I+ + ++
Sbjct: 598 RKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQS 633
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 59/113 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G+ + TY+ +++ + K++ ++ EKG D + ++H L ++G V+
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
A+ ++ EMK ++C P +V++ M+ + + A+ ++ ++Q NCY
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCY 640
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 192/467 (41%), Gaps = 34/467 (7%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHW 110
FF + R+ G T L AKR ++ + M + G +A++Y +V+
Sbjct: 178 FFARLLRA-GLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKS 236
Query: 111 LSNAGDVDGAVNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
L A+++ + M + C P +VS+ + F V +A ++ EM+Q+G+
Sbjct: 237 LCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVE 296
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ TY +++ L +A ++A + +M + GV+PD +I +G + +
Sbjct: 297 PDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKM 356
Query: 229 LRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
R M L F + + + D + + P+ +S + + T
Sbjct: 357 FRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYAT 416
Query: 285 DIEGPLSIDQGLVLILLKKKNLVA----IDSLLS-----GIMDKS-----------IQLD 324
EG + D + + K +VA + L+S G+MD++ ++ D
Sbjct: 417 --EGRFA-DMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPD 473
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
ST+I C R A+ F + + L Y +LI K E+V
Sbjct: 474 VVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVS 533
Query: 385 EMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSA 441
EM G + + +IH L + R + A +F+L+ D+ T+ +LI Y
Sbjct: 534 EMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLV 593
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G +KA + M GI P + T+N L++G K G++ D I +E
Sbjct: 594 GKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFRE 640
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 176/429 (41%), Gaps = 56/429 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY +++D +A+ + + V M +KG+ D +TYT+++H S +G
Sbjct: 293 KGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKE 352
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ +M K P IV++ ++M L + R K+A ++++ M +G P+ +Y++L+
Sbjct: 353 SAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLH 412
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G++ + +F M + G+ + NILI K G +L+ M+ +
Sbjct: 413 GYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRP 472
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + F ++AD + +FS + ++ +E +
Sbjct: 473 DVVTYSTLISAFCRMGRLADAME--------KFS----------QMISIGLEPNTVVYHS 514
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV-ISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ +LV L+S +M K I + V S+II C+ R A F + +
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHI 574
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ +LI + K +++ M G
Sbjct: 575 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG------------------------ 610
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ P+ TY L+ Y +G D L +++ M K + P+ T++++L GL
Sbjct: 611 -----IEPD----VVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLF 661
Query: 475 KLGRVSDAE 483
GR S A+
Sbjct: 662 HAGRTSAAK 670
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 19/366 (5%)
Query: 29 IKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
I + + N ++ H M++A L F + + +G D TY+T++ F R++
Sbjct: 435 IVANCHCFNILISAHAKRGMMDEAMLVFTEM-QGQGVRPDVVTYSTLISAFCRMGRLADA 493
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC-YPTIVSYTAYMK 144
F M G+ + V Y S++H GD+ A + EM K P IV +++ +
Sbjct: 494 MEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIH 553
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L RV +A DV+ +I G P T+ L++ GK E+A + M G++P
Sbjct: 554 SLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 613
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV 264
D N L+ CK+G+ +++ R M ++ + L A +
Sbjct: 614 DVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMF 673
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
H E I AV+ T I + +GL L + + L G MD + D
Sbjct: 674 H-----EMIDSGTAVDIDTYKI-----LLKGLCRNDLTDEAITLFHKL--GAMD--CKFD 719
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+++T+I RRR+ A F L + Y +I L+K + + +
Sbjct: 720 ITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFS 779
Query: 385 EMTKAG 390
M K+G
Sbjct: 780 SMEKSG 785
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/451 (19%), Positives = 177/451 (39%), Gaps = 41/451 (9%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E A +F S+ G T+ + + + R + +F+ M KG D V+Y+
Sbjct: 352 ESAKMFRKMTSK--GLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSI 409
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLK------ECYPTIVSYTAYMKILFLNDRVKEATDVYK 160
++H + G N++ M K C+ ++S A ++ EA V+
Sbjct: 410 LLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMM------DEAMLVFT 463
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
EM +G+ P+ TY+ L+ R G+ +A+E FS+M G++P+ + LI C G
Sbjct: 464 EMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHG 523
Query: 221 E-TRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISD 275
+ + L+ M + F + + +V D +D +H P ++
Sbjct: 524 DLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTF 583
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N ++ G L+ +K +D+++S I+ D +T++
Sbjct: 584 NSLID--------------GYCLVGKMEKAFGVLDAMVS----VGIEPDVVTYNTLVSGY 625
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C + D L+ F + + Y ++ L ++ EM +G ++ +
Sbjct: 626 CKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDI 685
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTAL---IGVYFSAGSADKALKIYK 452
+L+ L A +F L C T L I + ++A ++
Sbjct: 686 DTYKILLKGLCRNDLTDEAITLFHKLGA-MDCKFDITILNTVINALYKVRRREEANDLFA 744
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ G+ P++ T+ V++ L K G V +A+
Sbjct: 745 AISTSGLVPNVSTYGVMIHNLLKEGSVEEAD 775
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ +LD A R S+ K +F M + G +D TY ++ L D A+ ++ ++
Sbjct: 652 TYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 711
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+C I + L+ R +EA D++ + GL PN TY V++ L++ G
Sbjct: 712 GAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSV 771
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
EEA +FS M+++G P N +I + G+
Sbjct: 772 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGD 805
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 144/351 (41%), Gaps = 30/351 (8%)
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+E R P + +TY +LM+ RA + + F+++ AG++ N ++ C A
Sbjct: 145 EEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHA 204
Query: 220 GETRTIILILRYMKEN----RLALRYPVFKEALQTFKVADENDSLLWQVHPQ---FSPEF 272
T + +L + + A+ Y ++L + E ++ ++ + SP+
Sbjct: 205 KRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDV 264
Query: 273 ISDNDAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
+S N + E V +E + +V L K + + + +L
Sbjct: 265 VSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQ 324
Query: 316 IMDKSIQLDSAVISTIIE-VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++DK ++ D + II +C ++ A + F L + + + L K
Sbjct: 325 MVDKGVEPDGLTYTAIIHGYSCSGHWKESAKM-FRKMTSKGLIPGIVTFNSFMSSLCKHG 383
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---Y 431
EI + MT GH + ++L+H + R +F + D+ A +
Sbjct: 384 RSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM-ADKGIVANCHCF 442
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
LI + G D+A+ ++ M +G+ P + T++ L++ ++GR++DA
Sbjct: 443 NILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADA 493
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 183/446 (41%), Gaps = 62/446 (13%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ FTYT+++ + +F+ M + G + ++VTY+++++ L + G ++ A+++
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEM K PT+ +YT + L EA ++ +M +RG PN T+T L+ L R
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
GK+E A+ ++ KM G+ P N LI + C G T I ++M + +
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415
Query: 245 KEALQTFKVADENDSLLW----QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
E ++ F + + + + SP I+ N + +G +++ + L+
Sbjct: 416 NEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK--QG--NLNNAMRLLE 471
Query: 301 LKKKNLVAID---------------------SLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ K N + D SL G+M+ I + + II+ +
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ D AL F V+ Y +I K N+ + +M K G
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG--------- 582
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
LLP TYT+ I G A KI+ M ++
Sbjct: 583 --------------------LLPN----VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIY 485
P+L T++ L+ GL + GR DAE+Y
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMY 644
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/547 (21%), Positives = 213/547 (38%), Gaps = 85/547 (15%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
+ +S + IL W+ + +L +L K + V +L+TH + FF W+SR + F
Sbjct: 49 ELVSKISTILSSPKWEHSSELC-HLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFF 107
Query: 63 NHDRFTYTTMLD------IF-----------------GEAKRISSMKYVFELMQEKGINI 99
HD + +ML+ +F GE KR++ +++ E+ +
Sbjct: 108 KHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVT--QFLSEINSKYDFGY 165
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
++T+++ L VD A +++ +M P+++++ + IL RV+EA +
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ + PN +TYT L+ R + A +F +M + G P+ + LI C
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285
Query: 220 GETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFS-PEFISD 275
G + +L M + + Y + +L + E LL ++ + P +
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ ++ D G I GL +L G++ ++ ++ +I
Sbjct: 346 TALISGLSRD--GKFEIAIGLYHKMLA-----------DGLVPTTVTYNA-----LINQL 387
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R + A F++ + Y +I + K I ++M KAG S V
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447
Query: 396 YLGALLIH------RLGSARRPVPAAKIFSLLPEDQKCT--------------------- 428
LI+ L +A R + K L P+ T
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507
Query: 429 ----------ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
TYTA+I YF+ D AL ++ M G PS T+NV+++G K
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 479 VSDAEIY 485
+S+AE +
Sbjct: 568 ISEAENF 574
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ + G D +TYT ++ F ++ +F M E GI+ + VTYT+++ N
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
VD A+ ++ +M P+ +Y + + + EA + +M+++GL PN TYT
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYT 591
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
++ L R G+ A +IF +M++ P+ + LI C+ G
Sbjct: 592 SFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 148/356 (41%), Gaps = 18/356 (5%)
Query: 35 TVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N+++K M +KA + F+ + ++ G + + TY T++ + + +++ + E+
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKA-GSSPNVITYNTLIYGYCKQGNLNNAMRLLEI 472
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ G+ DA TYT ++ S G ++ A +++ M P V+YTA + F +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V +A ++ +M++ G P+ TY V++ + EA KM + G+ P+
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 212 LIEKCCKAGETRTIILILRYM-KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
I+ C+ G T I M K N Y + D+ ++ + + +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
N V+ TT ++G L + D L+ + K +Q +
Sbjct: 653 YGCEPN--VDTYTTLVKG-----------LCGEGRCYEADQLVVSMQKKGLQPSEEIYRA 699
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
++ C + + + AL F + L + Y ALI L K N + I + M
Sbjct: 700 LLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTM 755
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 194/477 (40%), Gaps = 51/477 (10%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD-- 116
S G N +RFTYT ++D F + I + + M +G+ ++ VTY +++ ++ AG+
Sbjct: 339 SSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMA 398
Query: 117 ------------------------VDG---------AVNIWEEMKLKECYPTIVSYTAYM 143
+DG A + EMK ++ P+ +Y+ +
Sbjct: 399 KAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
L + +++A +V +MI+ G+ PN + Y L++ V+ +YE A+E+ M GV
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD N LI C+A + ++L M E + + + + + E Q
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE-----IQ 573
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
V ++ + +S V I D G N V S +++K +
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVG---------NTVEALSTFKCMLEKGLIP 624
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D S II + + A+ F +K + + Y +LI K K +++
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSA 441
+EM G + + + LI+ L A ++F + E TY+ +I Y +
Sbjct: 685 DEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKS 744
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALS 498
G+ +A K++ M KGI P + +L+ G K G + A E + +LS
Sbjct: 745 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 801
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 194/451 (43%), Gaps = 26/451 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TYT ++D F + KR K +FE M G+N + TYT+++ G+++
Sbjct: 305 KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I +EM + +V+Y A + + + +A ++ EM+ GL P+ +TY +L++
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLID 424
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+++ +A E+ ++M+ + P ++LI C + + + +L M N +
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
++ ++ + + + + + E + + + L L++
Sbjct: 485 NVFMYGTLIKAY---------VQESRYEMAIELLKI-----MIANGVLPDLFCYNCLIIG 530
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + K + LL + +K I+ ++ I + A F+ + +
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y LI + + + M + G + + +IH L + A +F
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++P+ Y +LI + G +KA ++Y M GI+P++ +N L+ GL
Sbjct: 651 KFLKTGVVPD----VFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706
Query: 474 EKLGRVSDA-EIYRK-EKKSIQADALSKDAV 502
KLG V+ A E++ + E+K + D ++ +
Sbjct: 707 CKLGEVTKARELFDEIEEKDLVPDVVTYSTI 737
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 189/467 (40%), Gaps = 47/467 (10%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D F Y ++ AK++ K + M EKGI +A TY + ++ S +G++
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++M P V YT +K EA +K M+++GL P+ Y+ ++
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAII 633
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + GK +EA+ +F K + GV PD N LI CK G+ + M N +
Sbjct: 634 HSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGIN 693
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV---TTDIEGPLSIDQG 295
V+ + E + + F I + D V V +T I+G
Sbjct: 694 PNIVVYNTLINGLCKLGE----VTKARELFDE--IEEKDLVPDVVTYSTIIDG------- 740
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K NL L ++ K I D + +I+ + AL F + +
Sbjct: 741 ----YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 796
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ +A+ +LI K + E+ ++M + + +LI G A A
Sbjct: 797 VG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAE 855
Query: 416 KIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
++F +++P T TYT+L+ Y G+ K + ++K M +GI + V+
Sbjct: 856 QLFLDMETRNIIPN----TLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVM 911
Query: 470 LAGLEKLGRVSDAEIYRKEKKSIQADALSK----DAVPMEEKICDLL 512
A Y KE KS++A L + + +E+ + D L
Sbjct: 912 ------------ASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDAL 946
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 177/437 (40%), Gaps = 56/437 (12%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
I+ S ++ + K E +F ++ G D F Y +++ F + I +
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKT--GVVPDVFLYNSLISGFCKEGDIEKASQL 683
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
++ M GIN + V Y ++++ L G+V A +++E++ K+ P +V+Y+ +
Sbjct: 684 YDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCK 743
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ + EA ++ EMI +G+ P+ Y Y +L++ + G E+AL +F + Q+ V +A
Sbjct: 744 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSA 802
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVH 265
N LI+ CK G+ + M + +L + Y + +A ++ +E + L +
Sbjct: 803 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 862
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
T +I L+L + N + SL + + I D+
Sbjct: 863 -----------------TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDA 905
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ C + AL S+ + LE + ALI L K V E++ E
Sbjct: 906 IAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSE 965
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
M K SL + C T L+G ++ +G+ D
Sbjct: 966 MGKEELSL-----------------------------SSKTCN---TLLLG-FYKSGNED 992
Query: 446 KALKIYKTMCRKGIHPS 462
+A K+ M R G P+
Sbjct: 993 EASKVLGVMQRLGWVPT 1009
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 161/397 (40%), Gaps = 17/397 (4%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V+ M E I D TYT+V+ GDV + EM+ KEC P + +Y A++ L
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLC 287
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
V EA +V K M+++GL P+ +TYT+L++ + + +EA IF M +G+ P++
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
LI+ K G + I M L L + + A E + +
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE----MAKAMSL 403
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
F+ E + +E L+ LK ++ LL+ + + +
Sbjct: 404 FN----------EMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
S +I C A + ++ + Y LI ++ + + E+++ M
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
G ++ LI L A++ A + + E + TY A I +Y +G
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A + +K M GI P+ + +L+ G +G +A
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEA 610
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/460 (19%), Positives = 180/460 (39%), Gaps = 27/460 (5%)
Query: 32 DSYTVNQV----LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
D++T N + LK+H M KA + ++R FTY+ ++ + +
Sbjct: 415 DTWTYNLLIDGYLKSHD-MAKACELLAEM-KARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V + M G+ + Y +++ + A+ + + M P + Y + L
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+V+EA + +M ++G+ PN +TY + ++G+ + A F M +G+ P+
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
ILI+ C G T + + M E L + + + + +
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--- 649
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
++F+ T + + + L+ K+ ++ L ++ I + V
Sbjct: 650 -----------LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV 698
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T+I C A F+ + DL + Y +I K + ++ +EM
Sbjct: 699 YNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMI 758
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT----ATYTALIGVYFSAGS 443
G S Y+ +LI G + K SL E Q+ + + + +LI + G
Sbjct: 759 SKGISPDGYIYCILIDGCG---KEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGK 815
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+A +++ M K + P++ T+ +L+ K + +AE
Sbjct: 816 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAE 855
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY A IG G+ D+AL++ K M KG+ P T+ +L+ G K R +A++
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 182/476 (38%), Gaps = 57/476 (11%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYT---VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
+ +SA+ L +P+ ++YT V + L + A + + R RG Y
Sbjct: 102 RAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR-RGCAPIPPMY 160
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+L+ S V E + +G +D V++ + + G VD A+++ ++
Sbjct: 161 HVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPS 220
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
C P +VSY A +K L + R ++ +EM++ PPN T+ L+ YL R G +E
Sbjct: 221 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 280
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
E+ ++M E G PD +I+ CK G + IL M L + L+
Sbjct: 281 VHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLK 340
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
A+ W+
Sbjct: 341 GLCSAER-----WE--------------------------------------------ET 351
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+ LL+ + DK LD + +++ C + D + E + + Y +I
Sbjct: 352 EELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVING 411
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC-- 427
K + +++ MT G +++ L SA R V A + S + + Q C
Sbjct: 412 FCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ-QGCPL 470
Query: 428 -TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T+ LI G ++A+++ K M G P L +++ ++ GL K G+ +A
Sbjct: 471 NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEA 526
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++D F + + + + E M G D +TYT+V++ G +D AV +
Sbjct: 366 DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M C P +SYT +K L +R +A D+ +MIQ+G P N T+ L+ +L +
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
G E+A+E+ +M G PD + + +I+ KAG+T + +L M
Sbjct: 486 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 533
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +YT +L A+R + + M ++G ++ +T+ +++++L G V+ A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++M + C P ++SY+ + L + EA ++ M+ +G+ PN Y+ +
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L R G+ + +++F +Q+ ++ D N +I CK GET I L YM
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 603
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 135/336 (40%), Gaps = 22/336 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + Y T+L A+R + + M +K +D VT+ ++ + G VD
Sbjct: 325 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 384
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + E+M + C P +++YT + + EA + K M G PN +YT+++
Sbjct: 385 RVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 444
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L A ++ +A ++ S+M + G + N LI CK G I +L+ M N +
Sbjct: 445 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 504
Query: 239 ---LRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y + L DE LL V+ SP I + + I LS
Sbjct: 505 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI--------IYSSIASALS--- 553
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++ + + + I D +I+ D+ + + +I C + A+ Y V
Sbjct: 554 -------REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ Y LI L + E++ E+ G
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 100/487 (20%), Positives = 179/487 (36%), Gaps = 70/487 (14%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR---GFNH 64
I + D A LL++LP + D + N VLK M K W +
Sbjct: 202 ICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLC-MAKRWGCVQELMEEMVRMACPP 260
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ T+ T++ + V M E G D Y +++ + G + A I
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M P +V Y +K L +R +E ++ EM + P + T+ +L+++ +
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-----KENRLAL 239
G + +E+ +M G PD +I CK G +++L+ M K N ++
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS- 439
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSP-EFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y + + L + + + + L+ Q+ Q P I+ N + F
Sbjct: 440 -YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINF----------------- 481
Query: 299 ILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
L KK LV AI+ LL ++ D ST+I+ + D AL V +
Sbjct: 482 --LCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y ++ L + KV ++ + + + A+L
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNI----QDTTIRSDAVL--------------- 579
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
Y A+I G ++A++ M G P+ T+ +L+ GL
Sbjct: 580 --------------YNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 625
Query: 477 GRVSDAE 483
G V +A+
Sbjct: 626 GFVKEAQ 632
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 183/446 (41%), Gaps = 62/446 (13%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ FTYT+++ + +F+ M + G + ++VTY+++++ L + G ++ A+++
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEM K PT+ +YT + L EA ++ +M +RG PN T+T L+ L R
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
GK+E A+ ++ KM G+ P N LI + C G T I ++M + +
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415
Query: 245 KEALQTFKVADENDSLLW----QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
E ++ F + + + + SP I+ N + +G +++ + L+
Sbjct: 416 NEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK--QG--NLNNAMRLLE 471
Query: 301 LKKKNLVAID---------------------SLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ K N + D SL G+M+ I + + II+ +
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ D AL F V+ Y +I K N+ + +M K G
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQG--------- 582
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
LLP TYT+ I G A KI+ M ++
Sbjct: 583 --------------------LLPN----VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIY 485
P+L T++ L+ GL + GR DAE+Y
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMY 644
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/547 (21%), Positives = 213/547 (38%), Gaps = 85/547 (15%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
+ +S + IL W+ + +L +L K + V +L+TH + FF W+SR + F
Sbjct: 49 ELVSKISTILSSPKWEHSSELC-HLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFF 107
Query: 63 NHDRFTYTTMLD------IF-----------------GEAKRISSMKYVFELMQEKGINI 99
HD + +ML+ +F GE KR++ +++ E+ +
Sbjct: 108 KHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVT--QFLSEINSKYDFGY 165
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
++T+++ L VD A +++ +M P+++++ + IL RV+EA +
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ + PN +TYT L+ R + A +F +M + G P+ + LI C
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285
Query: 220 GETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFS-PEFISD 275
G + +L M + + Y + +L + E LL ++ + P +
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ ++ D G I GL +L G++ ++ ++ +I
Sbjct: 346 TALISGLSRD--GKFEIAIGLYHKMLA-----------DGLVPTTVTYNA-----LINQL 387
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R + A F++ + Y +I + K I ++M KAG S V
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447
Query: 396 YLGALLIH------RLGSARRPVPAAKIFSLLPEDQKCT--------------------- 428
LI+ L +A R + K L P+ T
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507
Query: 429 ----------ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
TYTA+I YF+ D AL ++ M G PS T+NV+++G K
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 479 VSDAEIY 485
+S+AE +
Sbjct: 568 ISEAENF 574
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ + G D +TYT ++ F ++ +F M E GI+ + VTYT+++ N
Sbjct: 472 IMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLA 531
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
VD A+ ++ +M P+ +Y + + + EA + +M+++GL PN TYT
Sbjct: 532 KVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYT 591
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
++ L R G+ A +IF +M++ P+ + LI C+ G
Sbjct: 592 SFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 176/429 (41%), Gaps = 19/429 (4%)
Query: 35 TVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N+++K M +KA + F+ + ++ G + + TY T++ + + +++ + E+
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKA-GSSPNVITYNTLIYGYCKQGNLNNAMRLLEI 472
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ G+ DA TYT ++ S G ++ A +++ M P V+YTA + F +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V +A ++ +M++ G P+ TY V++ + EA KM + G+ P+
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 212 LIEKCCKAGETRTIILILRYM-KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
I+ C+ G T I M K N Y + D+ ++ + + +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
N V+ TT ++G L + D L+ + K +Q +
Sbjct: 653 YGCEPN--VDTYTTLVKG-----------LCGEGRCYEADQLVVSMQKKGLQPSEEIYRA 699
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
++ C + + + AL F + L + Y ALI L K N + I + M +
Sbjct: 700 LLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKH 759
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+ + +L+ L K+ ++ E + CT + + + + D A+KI
Sbjct: 760 WNSDEVVWTVLLDGLLKEGETDLCLKLLHVM-ESRNCTLNFQTYVMLARELSALDCAIKI 818
Query: 451 YKTMCRKGI 459
+ + GI
Sbjct: 819 PQISQQLGI 827
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 203/477 (42%), Gaps = 58/477 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A+ F V RG D Y+T++D + +A + +F KG+ +D V ++
Sbjct: 302 MDRAFDLFK-VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S + +GD+ A +++ M + P +V+YT +K L + R+ EA +Y ++++R
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG----- 220
G+ P+ TY+ L++ + G ++ M + G PD +L++ K G
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 221 ETRTIILILRYMKENRLAL--------RYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
++ ++ + ++ N + R F EAL+ F++ ++ + P
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG-----IYGIKP------ 529
Query: 273 ISDNDAVEFVT----TDIEGPLSIDQGLVLILLKKKNLVAIDSL---------------- 312
D F T + +EG L ++ L L K + D+L
Sbjct: 530 ----DVATFTTVMRVSIMEGRL--EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 313 ----LSGIMDKS-IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
L +M ++ I D AV + +I + R + A F ++ + + Y +I
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQ 425
L + I E + +LIH L A ++FS++ E +
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY L+ + + + + K+++ M KGI PS+ ++++++ GL K GRV +A
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 22 DLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
DL++ I D N V+ K H +E A FFN + + D TY TM+ +
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHR-IEDASKFFNNLIEGK-MEPDIVTYNTMICGYC 647
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+R+ + +FEL++ + VT T ++H L D+DGA+ ++ M K P V
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y M + ++ + +++EM ++G+ P+ +Y+++++ L + G+ +EA IF +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+A + PD A ILI CK G L+ +M N
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F + T T ++ + + + +F +M EKG +AVTY +M W S + D++G+
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
++EEM+ K P+IVSY+ + L RV EAT+++ + I L P+ Y +L+
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 182 VRAGKYEEALEIFSKMQEAGVQPD 205
+ G+ EA ++ M GV+PD
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPD 810
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 189/414 (45%), Gaps = 24/414 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T+++ F + + +F++M+++GI D + Y++++ AG + ++ +
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K +V +++ + + + + A+ VYK M+ +G+ PN TYT+L++ L + G+
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA ++ ++ + G++P + LI+ CK G R+ + E+ + + YP +
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY----EDMIKMGYP--PDV 461
Query: 248 LQTFKVADENDSLLWQVHP-QFSPEFISDNDAVEFVTTD--IEGPLSIDQGLVLILLKKK 304
+ + D +H +FS + + + + V + I+G +++ LK
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR--FDEALKVF 519
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
L+ I I+ D A +T++ V+ R + AL F KM L + AY
Sbjct: 520 RLMGI---------YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 365 ALIGILIKLNTFPKVA-EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI K + P + ++ + M + S + + ++IH L R A+K F+ L E
Sbjct: 571 TLIDAFCK-HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 424 D--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ TY +I Y S D+A +I++ + P+ T +L+ L K
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 22 DLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
+LLK P ++ T+ VL + M+ A F+ ++ +G + TY ++D F +
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSK 718
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+ I +FE MQEKGI+ V+Y+ ++ L G VD A NI+ + + P +V+
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
Y ++ R+ EA +Y+ M++ G+ P+ L EY
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEY 820
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/421 (19%), Positives = 167/421 (39%), Gaps = 32/421 (7%)
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
L+ E+G + V+ V+ LS ++ A + + P +V++ +
Sbjct: 241 RLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ A D++K M QRG+ P+ Y+ L++ +AG ++FS+ GV+ D
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHP 266
+ I+ K+G+ T ++ + M ++ + Y + + L E + Q+
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 267 Q-FSPEFISDNDAV----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
+ P ++ + + E + P + G+++ L K+ L+
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 310 DSLLS-GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE----YSVKMDLNLERTAYL 364
S ++ +SI+L+ V +++I+ C R D AL F Y +K D+ +
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV----ATFT 535
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
++ + I + + M K G LI +P ++F L+ +
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 425 QKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ A +I + F + A K + + + P + T+N ++ G L R+ +A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 483 E 483
E
Sbjct: 656 E 656
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 176/431 (40%), Gaps = 22/431 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG +R TY ++ + + + V ELM + + D TY +++ L N G +
Sbjct: 270 KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRI 329
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + +EM+ + P +VSY + ++ EA + +EM ++G+ PN T+ ++
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIM 389
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+++ + GK ++A +KM+E+G PD N LI CKAG + M +
Sbjct: 390 VKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNM 449
Query: 238 ALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ L+T K +E LL + FI D V + T
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKR--GYFI---DEVSYGT----------- 493
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L++ K N+ L + +K I + + II C + + A+ ++
Sbjct: 494 -LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L + T Y ++ + K + +M + V+ +L+ L A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKA 612
Query: 415 AKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F+ K T TY LI G D A + M K + P T+N ++
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 473 LEKLGRVSDAE 483
L GR+ +AE
Sbjct: 673 LTDSGRIREAE 683
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 148/392 (37%), Gaps = 57/392 (14%)
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
GI + T+ V++ AV M C P V+Y + L R+ +A
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDA 262
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
D+ +M RGL PN TY +L+ + G +EA + M + + PD N+LI
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
C G + FK+ DE ++L + P+ +S
Sbjct: 323 LCNEGRIE-------------------------EAFKLRDEMENL------KLLPDVVSY 351
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N T I G L + + LL + +K ++ ++ + +++
Sbjct: 352 N-------TLINGCLEWSK-----------ISEAFKLLEEMSEKGVKPNAVTHNIMVKWY 393
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C + D A + + + Y LI K + ++EM + +
Sbjct: 394 CKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDS 453
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALKI 450
++ L ++ A K+ S + D+ +Y LI YF G+ D+ALK+
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE---VSYGTLIVGYFKDGNVDRALKL 510
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ M K I PS T+N ++ GL + G+ A
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D T N +L + +EKA+ F N + + F D FT +L + +
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVEN-SFKPDVFTCNILLRGLCMEGMLEKALKL 615
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F KG ID VTY +++ L G +D A N+ EM+ KE P +Y A + L
Sbjct: 616 FNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTD 675
Query: 149 NDRVKEATDVYKEMIQRGLPP-----------------------NCYTYTVLMEYLVRAG 185
+ R++EA + +M+++G P + Y+ ++ L G
Sbjct: 676 SGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEG 735
Query: 186 KYEEALEIFSKMQEAGVQPDKAA 208
KY++A+ IF + ++ G+ DK+
Sbjct: 736 KYKDAMRIFGESKQKGITVDKST 758
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 29/185 (15%)
Query: 29 IKWDSYTVNQVLK---THPPMEKAWLFFN-WVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
K D +T N +L+ +EKA FN WVS+ + D TY T++ + R+
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAI--DTVTYNTLITSLCKEGRLDD 646
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT--------- 135
+ M+EK + D TY +++ L+++G + A +M K P
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNE 706
Query: 136 --------------IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
V+Y+ ++K L + K+A ++ E Q+G+ + TY LM+ L
Sbjct: 707 TVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766
Query: 182 VRAGK 186
++ K
Sbjct: 767 IKRRK 771
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 134/355 (37%), Gaps = 61/355 (17%)
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
D++ +++ P T + Y V++G+ A +IF KM+ ++P+ CN L+
Sbjct: 122 DLHLSILRLTSPSKALLDTAIGAY-VQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS- 179
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
++RY + ++ F +A++ V + N + +F
Sbjct: 180 -----------LVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKF---K 225
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK-SIQLDSAVISTIIEVN 335
DAVEF+ +M K + D+ +TI++
Sbjct: 226 DAVEFLN--------------------------------VMGKYNCSPDNVTYNTILDAL 253
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R A L R Y L+ K+ + A ++E MT+ V
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313
Query: 396 YLGALLIHRLGSARRPVPAAKI------FSLLPEDQKCTATYTALIGVYFSAGSADKALK 449
+ +LI+ L + R A K+ LLP+ +Y LI +A K
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD----VVSYNTLINGCLEWSKISEAFK 369
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
+ + M KG+ P+ T N+++ K G++ DA I + E+ D ++ + +
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 185/450 (41%), Gaps = 58/450 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI---DAVTYTSVMHWLSNAGDV 117
G D F+Y+ +L F KR + +M + G + VTYT+V+ L A V
Sbjct: 159 GCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMV 218
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A +++ M K P +YT + + KE + +EM GL P+CY Y VL
Sbjct: 219 DRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVL 278
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++YL + G+ EA IF + G++P+ IL+ G + L M N +
Sbjct: 279 LDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGV 338
Query: 238 ALRYPVFKEALQTFK---VADENDSLLWQVHPQ-FSPEFIS--------------DNDAV 279
+ + +F + + DE + ++ Q SP ++ D+ +
Sbjct: 339 SPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVL 398
Query: 280 EFVTTDIEG---PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+F EG + + LV L + L ++D+ I+LD+ +T++ C
Sbjct: 399 KFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLC 458
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
R+G ++ + LI +++++ P V I GH L
Sbjct: 459 ----REGRVMEAQ---------------RLIDLMLRVGVRPDV--ISYNTLVDGHCL--- 494
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
R+ A + + L P+ TY L+ Y A D A +++ M
Sbjct: 495 -----TGRIDEAAKLLDVIVSIGLKPD----KVTYNTLLHGYCKARRIDDAYSLFREMLM 545
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA-EIY 485
KG+ P + T+N +L GL + GR S+A E+Y
Sbjct: 546 KGLTPDVVTYNTILHGLFQTGRFSEAKELY 575
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 181/440 (41%), Gaps = 27/440 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++D +A+ + K VF+ M +KG+ + TYT ++H + G V + +EM
Sbjct: 204 TYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEM 263
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P Y + L N R EA +++ +I++G+ PN Y +L+ G
Sbjct: 264 STHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSL 323
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVF 244
E M GV PD NI+ K + I M++ RL+ + Y
Sbjct: 324 SEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGAL 383
Query: 245 KEALQTFKVADENDSLL---WQVHPQFSPE-FISDNDAVEFVTTDIEGPLS------IDQ 294
+AL K+ +D++L + +P+ F+ + T D +DQ
Sbjct: 384 IDAL--CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQ 441
Query: 295 G----------LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
G L+ L ++ ++ L+ ++ ++ D +T+++ +C R D A
Sbjct: 442 GIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEA 501
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
+ V + L ++ Y L+ K + EM G + V ++H
Sbjct: 502 AKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 561
Query: 405 LGSARRPVPAAKIF-SLL-PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L R A +++ S++ Q TY +I D+A K++ ++C K +
Sbjct: 562 LFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLD 621
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
+ T N+++ L K GR DA
Sbjct: 622 IFTANIMIGALLKGGRKEDA 641
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 178/431 (41%), Gaps = 52/431 (12%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F+ V R +G + Y +L + +S M +LM G++ D + + +
Sbjct: 295 FDSVIR-KGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYA 353
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+D A++I+++M+ + P IV+Y A + L RV +A + +MI G+ P+ +
Sbjct: 354 KKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIF 413
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
++ L+ L K+E+A E+F ++ + G++ D N L+ C+ G R M
Sbjct: 414 VFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG---------RVM 464
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ RL L+ +V + P+ IS N V+ + G I
Sbjct: 465 EAQRLI--------------------DLMLRVGVR--PDVISYNTLVD--GHCLTG--RI 498
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
D+ LL I+ ++ D +T++ C RR D A F +
Sbjct: 499 DEAA--------------KLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREML 544
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
L + Y ++ L + F + E+ M + + +Y ++I+ L
Sbjct: 545 MKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVD 604
Query: 413 PAAKIF-SLLPED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A K+F SL +D Q T +IG G + A+ ++ T+ G+ P + T+ ++
Sbjct: 605 EAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIA 664
Query: 471 AGLEKLGRVSD 481
L K G + +
Sbjct: 665 ENLIKEGSLEE 675
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 7/222 (3%)
Query: 6 SNVYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRS 59
S VY + W+ A++L + I+ D+ N + L + +A + + R
Sbjct: 417 SLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRV 476
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G D +Y T++D RI + +++ G+ D VTY +++H A +D
Sbjct: 477 -GVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDD 535
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ EM +K P +V+Y + LF R EA ++Y MI N YTY +++
Sbjct: 536 AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIIN 595
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L + +EA ++F + +Q D NI+I K G
Sbjct: 596 GLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGR 637
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 104/220 (47%), Gaps = 4/220 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+ + ++ D + N ++ H +++A + + S G D+ TY T+L + +
Sbjct: 471 DLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV-SIGLKPDKVTYNTLLHGYCK 529
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A+RI +F M KG+ D VTY +++H L G A ++ M I +
Sbjct: 530 ARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 589
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y + L N+ V EA ++ + + L + +T +++ L++ G+ E+A+++F+ +
Sbjct: 590 YNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATIS 649
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G+ PD ++ E K G + + M+EN A
Sbjct: 650 AYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTA 689
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 152/373 (40%), Gaps = 27/373 (7%)
Query: 137 VSYTAYMKILFLNDRVKEATDVY-KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
V ++ +K L RV EATD+ + M + G P+ ++Y++L++ + EEALE+ S
Sbjct: 129 VIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLS 188
Query: 196 KMQEAG---VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-------------L 239
M + G P+ +I+ CKA + ++M + + L
Sbjct: 189 MMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYL 248
Query: 240 RYPVFKEALQTFKVADEN----DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+KE +Q + + D ++ V + + +A + I + +
Sbjct: 249 SIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVT 308
Query: 296 LVLILLK----KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ ILL + +L + S L ++ + D + + + D A+ F+
Sbjct: 309 IYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKM 368
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
+ L+ Y ALI L KL +M G + +++ + L++ L + +
Sbjct: 369 RQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKW 428
Query: 412 VPAAKI-FSLLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A ++ F +L + + T + L+ G +A ++ M R G+ P + ++N L
Sbjct: 429 EKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTL 488
Query: 470 LAGLEKLGRVSDA 482
+ G GR+ +A
Sbjct: 489 VDGHCLTGRIDEA 501
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 82/203 (40%), Gaps = 9/203 (4%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D A L + + +K D T N +L +T E L+ + ++ N +TY
Sbjct: 534 DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN--IYTYN 591
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+++ + + +F + K + +D T ++ L G + A++++ +
Sbjct: 592 IIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAY 651
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P + +Y + L ++E +++ M + G PN L+ +L+ G A
Sbjct: 652 GLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711
Query: 191 LEIFSKMQEAGVQPDKAACNILI 213
SK+ E + + ++LI
Sbjct: 712 GAYLSKLDEKNFSLEASTTSMLI 734
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 167/411 (40%), Gaps = 58/411 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++DI+G +++ M VF+ MQEK D VT+ S++ N G + N++ EM
Sbjct: 287 TYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREM 346
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + ++ ++ V + D+YK +++ GL P T+ LM L R G++
Sbjct: 347 KRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRW 406
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
++ ++ +M EAG+Q A LI +G+ + +Y+ E + + P+
Sbjct: 407 QQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQ---FFQLRKYIDELEKSAKQPLSGIL 463
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+TF +A D E L+++Q
Sbjct: 464 CKTFVLAYCK------------------------CCMDNEAQLALNQ------------- 486
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ D D V + +I + + A+ E K L + Y L+
Sbjct: 487 --------LYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLM 538
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LL 421
+ + + K E++ EM +AG + + L++ R AA++F +
Sbjct: 539 SMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVR 598
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
P++ T+ L+G Y S G +AL + + M G P+ TF LL G
Sbjct: 599 PDN----FTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 645
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 108/505 (21%), Positives = 198/505 (39%), Gaps = 41/505 (8%)
Query: 10 KILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
K L+ W D K + + ++ VL H + A F + + ++ D + Y
Sbjct: 20 KALEVFEWIRKHDCFKLRGVA--TASILSVLGNHEQLPAALELFESLKQDESYSLDVYAY 77
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV-DGAVNIWEEMK 128
T+++ I A+R +FE MQ +G +AVTY ++ GD D ++++EMK
Sbjct: 78 TSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMK 137
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
E P +Y + N +EA +++EM + G PN TY L++ + G ++
Sbjct: 138 DLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHK 197
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA E+ +M+ AG+ P+ N LI +AG + + + L + +
Sbjct: 198 EASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLI 257
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI--DQGLVLILLKKKN- 305
F A+ + L + + + N + DI G + D V +++KN
Sbjct: 258 SAFNRAERYEKAL-ETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNC 316
Query: 306 ---LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD---------------GALLA 347
LV +SLL + +++ + V + +R G
Sbjct: 317 TPDLVTWNSLLKSFG------NCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGY 370
Query: 348 FEYSVKMDLNLERTA-------YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
+YSV + L RT + AL+ L + + + ++ +EM +AG L A
Sbjct: 371 VDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAG 430
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRK 457
LIH ++ + K L + K + + Y ++A +
Sbjct: 431 LIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDN 490
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA 482
G P + FN +++ K G + A
Sbjct: 491 GHSPDIKVFNAMISMCAKRGWIERA 515
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 176/446 (39%), Gaps = 53/446 (11%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE-LMQEKGINIDAVTYT 105
+KA F W+ + F ++L + G +++ + +FE L Q++ ++D YT
Sbjct: 19 KKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYT 78
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF-LNDRVKEATDVYKEMIQ 164
S++ LS A D + ++E M+ + V+Y + + D +++EM
Sbjct: 79 SLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKD 138
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+ P+ YTY ++ ++ +EAL +F +M+EAG P++ N L++ K G
Sbjct: 139 LEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGG---- 194
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
+ KEA ++ L+ SP ++ N E +
Sbjct: 195 ------------------MHKEA---------SELLVEMEAAGISPNIVTYN---ELIAA 224
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
L D+ L KK+L++ K + D T+I R + A
Sbjct: 225 YARAGL-CDEAAAL----KKSLLS----------KGLCPDEFTYCTLISAFNRAERYEKA 269
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
L F K + Y LI I ++ + ++ + M + + + L+
Sbjct: 270 LETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKS 329
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
G+ + +F + T+ LI Y G D ++ IYK + R G+ P+
Sbjct: 330 FGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPT 389
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ TF L+A L + GR E +E
Sbjct: 390 VPTFAALMASLAREGRWQQCEKVSQE 415
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
+ G + D + +++ + G ++ AV + EE++ + P V+Y M +
Sbjct: 489 DNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYH 548
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+A +V EM + G PN TY L+ + G+ ++A +F M A V+PD N L+
Sbjct: 549 KAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLV 608
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
G + + ++ YM E+ FK L +
Sbjct: 609 GSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D + M+ + + I + E +++ + D VTY +M G A
Sbjct: 491 GHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKA 550
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P +++Y + + R+ +A V+ +M+ + P+ +T+ L+
Sbjct: 551 EEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGS 610
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
G Y+EAL + M E G QP + L++
Sbjct: 611 YSSLGLYKEALSVIEYMTEHGCQPTQITFKALLD 644
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 10/198 (5%)
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL-NTF 376
D+S LD +++I + RR D + FE + Y ++ + K +++
Sbjct: 67 DESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSW 126
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTAL 434
++ + +EM S Y +I A ++F + E C TY AL
Sbjct: 127 DRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 186
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
+ VY G +A ++ M GI P++ T+N L+A + G +A +K
Sbjct: 187 LDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK------- 239
Query: 495 DALSKDAVPMEEKICDLL 512
LSK P E C L+
Sbjct: 240 SLLSKGLCPDEFTYCTLI 257
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 80/222 (36%), Gaps = 40/222 (18%)
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
I SL + D I D +T+I + AL F+ + R Y AL+
Sbjct: 129 IQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLD 188
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGV--------------------------------- 395
+ K + +E++ EM AG S +
Sbjct: 189 VYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCP 248
Query: 396 --YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKI 450
+ LI A R A + F+ + CT TY LI +Y D +K+
Sbjct: 249 DEFTYCTLISAFNRAERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGRMEKLDDMMKV 307
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD-AEIYRKEKKS 491
+K M K P L T+N LL G +++ + ++R+ K++
Sbjct: 308 FKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA 349
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 189/492 (38%), Gaps = 75/492 (15%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG D YTT++D G+ +I K V I + VTYT ++ AG++D
Sbjct: 357 SRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNID 416
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
GA + +M+ K P +V++++ + L + +A ++M G+ PN TY L+
Sbjct: 417 GAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLI 476
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + E AL+++ M GV+ + + L+ K G + + M E L
Sbjct: 477 DGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLL 536
Query: 239 L---RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
L Y + L FK + +L + E + N + + V ++
Sbjct: 537 LDHVNYATLMDGL--FKTGNMPAAL------KVGQELMERNLSPDAVVYNV--------- 579
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE----YS 351
+ L + S L + + ++ D A +T+I C AL S
Sbjct: 580 FINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSS 639
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
+K +L Y L+ L++ K ++ EM AG + ++ +R P
Sbjct: 640 IKPNL----ITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSP 695
Query: 412 VPAAKIFSLL-----------------------------------------PEDQKCTAT 430
++ L+ P+ T T
Sbjct: 696 YVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPD----TIT 751
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKE 488
+ ALI + + D A Y M +G+ P++ TFN LL GLE GR+ +A+ I +
Sbjct: 752 FNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMK 811
Query: 489 KKSIQADALSKD 500
K ++ + L+ D
Sbjct: 812 KMGLEPNNLTYD 823
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 197/466 (42%), Gaps = 39/466 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G + TY T++D F + + + V+ M +G+ + S+++ L G++
Sbjct: 461 KDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNI 520
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++++M + V+Y M LF + A V +E+++R L P+ Y V
Sbjct: 521 EEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVF 580
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L R GK+ EA +M+ G++PD+A N +I C+ G T + +L MK + +
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVE------------- 280
+ Y L V ++ LL ++ F+P ++ ++
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE 700
Query: 281 ----FVTTDIEGPLSIDQGLVLIL----LKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+ + +++ LV +L + +K + +D +L + I D+ + +I
Sbjct: 701 VHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLG----RGIAPDTITFNALI 756
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+C D A + + L+ + L+G L + ++ EM K G
Sbjct: 757 LGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLE 816
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADK 446
+L+ V A +++ +P+ +TY +LI + AG ++
Sbjct: 817 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK----ASTYNSLISDFAKAGMMNQ 872
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
A +++ M R+G+ + T+++LL G KL ++ I K+ K +
Sbjct: 873 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKEL 918
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 182/446 (40%), Gaps = 48/446 (10%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+ + + RS G D T + ++D R S +F M + G+ + VTY
Sbjct: 275 IEEAFTLYEGMVRS-GVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYC 333
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ + L+ V+ ++ + EM + +V YT M L +++EA DV + +
Sbjct: 334 TFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSD 393
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ PNC TYTVL++ RAG + A ++ +M+E V P+ + ++ K G
Sbjct: 394 NITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKA 453
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+R MK++ +A + + F ++ L V+ E + N+ +
Sbjct: 454 AGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAAL-DVYRDMLHEGVEANNFI------ 506
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
+D LV L K N+ ++L + ++ + LD +T+++ AL
Sbjct: 507 ------VDS-LVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAAL 559
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+ ++ +L+ + Y I L +L F + ++EM G
Sbjct: 560 KVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTG--------------- 604
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
L DQ ATY +I G+ KALK+ M I P+L T
Sbjct: 605 ---------------LEPDQ---ATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLIT 646
Query: 466 FNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ L+ GL + G V A+ E S
Sbjct: 647 YTTLVVGLLEAGVVEKAKYLLNEMAS 672
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 197/477 (41%), Gaps = 36/477 (7%)
Query: 29 IKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNH-DRFTYTTMLDIFGEAKRIS 83
+ WD T++ L +T E A L V R RG + + ++D + + + ++
Sbjct: 148 VPWDGVTMSTALVGLSRTGLVGEAAALAEMLV-RGRGIDGLGVVGWNALIDGYCKVQDMA 206
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ V E M +G+++D V Y +++ +GD D A + E MK P++V++T +
Sbjct: 207 AALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLI 266
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
R++EA +Y+ M++ G+ P+ T + L++ L R G++ EA +F +M + GV
Sbjct: 267 GEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVA 326
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDS 259
P+ I+ K + +L M +A+ ++ + K+ + D
Sbjct: 327 PNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDV 386
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
L +SDN VT + LV + N+ + +L + +K
Sbjct: 387 LR---------HALSDNITPNCVTYTV---------LVDAHCRAGNIDGAEQMLLQMEEK 428
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM---DLNLERTAYLALIGILIKLNTF 376
S+ + S+I+ +R A Y KM + Y LI K
Sbjct: 429 SVSPNVVTFSSILN---GLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQ 485
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTAL 434
++ +M G ++ L++ L A +F + E Y L
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ F G+ ALK+ + + + + P +NV + L +LG+ S+A+ + KE ++
Sbjct: 546 MDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRN 602
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 29 IKWDSYTVNQVLKT--------HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+KW S N + T +EKA N ++ S GF TY +L ++
Sbjct: 635 MKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA-SAGFTPTPLTYRRVLQACSGSR 693
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+ V ELM G++ D Y +++H L G A + +EM + P +++
Sbjct: 694 SPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFN 753
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
A + + + A Y +M+ +GL PN T+ L+ L AG+ EA + +M++
Sbjct: 754 ALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKM 813
Query: 201 GVQPDKAACNILI 213
G++P+ +IL+
Sbjct: 814 GLEPNNLTYDILV 826
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 175/444 (39%), Gaps = 75/444 (16%)
Query: 60 RGFNHDRFTYTTML------DIFGEAKRISSMKYVFELMQEKGIN-IDAVTYTSVMHWLS 112
RG D T +T L + GEA ++ M L++ +GI+ + V + +++
Sbjct: 146 RGVPWDGVTMSTALVGLSRTGLVGEAAALAEM-----LVRGRGIDGLGVVGWNALIDGYC 200
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
D+ A+ + E M + +V Y + F + A +V + M G+ P+
Sbjct: 201 KVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVV 260
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T+T L+ + + EEA ++ M +GV PD + L++ C+ G + R M
Sbjct: 261 THTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREM 320
Query: 233 KENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV--TTDIE 287
+ +A + Y F ++L + +E+ LL E +S A++ V TT ++
Sbjct: 321 DKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLG--------EMVSRGVAMDLVMYTTVMD 372
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA--- 344
L K+ + +L + +I + + +++ +C DGA
Sbjct: 373 -----------RLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQM 421
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
LL E + ++ + +++ L+K K A + +M +G + V
Sbjct: 422 LLQME---EKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNV--------- 469
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
TY LI +F + AL +Y+ M +G+ +
Sbjct: 470 ------------------------VTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNF 505
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKE 488
+ L+ GL K G + +AE K+
Sbjct: 506 IVDSLVNGLRKNGNIEEAEALFKD 529
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ VL H KA + + + RG D T+ ++ ++ + + + M
Sbjct: 719 TLVHVLCCHGMTRKATIVLDEM-LGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 777
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY----TAYMKILFLND 150
+G++ + T+ +++ L +AG + A + EMK P ++Y T Y K ++
Sbjct: 778 QGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKK---SN 834
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+V EA +Y EM+ +G P TY L+ +AG +A E+FS+M+ GV + +
Sbjct: 835 KV-EALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYD 893
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
IL+ K + ++L+ MKE L + K + + A + W+
Sbjct: 894 ILLNGWSKLRNGTEVRILLKDMKE----LGFKPSKGTISSMSRAFSKPGMTWE 942
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 7/234 (2%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRG 61
I+ + ++ K+S S ++N ++ D T N ++ KA N + S
Sbjct: 581 INCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSS- 639
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ TYTT++ EA + KY+ M G +TY V+ S + +
Sbjct: 640 IKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVIL 699
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ E M + I Y + +L + ++AT V EM+ RG+ P+ T+ L+
Sbjct: 700 EVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGH 759
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNIL---IEKCCKAGETRTIILILRYM 232
++ + A +++M G+ P+ A N L +E + GE T+I ++ M
Sbjct: 760 CKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKM 813
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 144/360 (40%), Gaps = 22/360 (6%)
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
VSY ++ L + A V EM +RG+P + T + + L R G EA + ++
Sbjct: 118 VSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAAL-AE 176
Query: 197 MQEAGVQPDKAAC---NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
M G D N LI+ CK + + ++ M L+L + + F
Sbjct: 177 MLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFY 236
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
+ + D+ W+V + + +E + L+ K K + +L
Sbjct: 237 SGDADA-AWEVAERMKAD-------------GVEPSVVTHTTLIGEYCKMKRIEEAFTLY 282
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
G++ + D +S +++ C R A F K+ + Y I L K+
Sbjct: 283 EGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKV 342
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ---KCTAT 430
+ ++ EM G ++ + + ++ RLG + A + D C T
Sbjct: 343 QRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCV-T 401
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
YT L+ + AG+ D A ++ M K + P++ TF+ +L GL K G ++ A Y ++ K
Sbjct: 402 YTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMK 461
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 14/289 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TYT+++D G+ KR +F+ M +G+ +D V YT+++ L AG + A
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ M + C P +V+ + + L R+ A ++K M RGL PN Y+ L+
Sbjct: 290 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 349
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +A K + ALE+ ++M++A PD NILI+ CK+G+ M E
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 409
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F A D+ V S S N V + T L+ L
Sbjct: 410 VYTYNILVSGFCKAGNTDAACG-VFDDMSSSHCSPN-VVTYGT------------LISGL 455
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
K++ L + ++ DS V S++++ C + +G + F+
Sbjct: 456 CKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFD 504
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 179/427 (41%), Gaps = 18/427 (4%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ + G D TYT ++D + K+I + E + G TY ++++ L G
Sbjct: 155 TTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMG 214
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++ A+++ ++ C P +V+YT+ + L R EA ++KEM RGL + YT
Sbjct: 215 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYT 274
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ L++AGK +A ++ M G PD + +I+ CKAG + I + M+
Sbjct: 275 ALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
LA V+ + A + D L ++ Q F + + +T +I
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCAL-EMLAQMKKAFCTPDT----ITYNI--------- 380
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ L K ++ A + +++ + D + ++ C D A F+
Sbjct: 381 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSH 440
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y LI L K K + + M + G ++ + L+ L + +
Sbjct: 441 CSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC 500
Query: 416 KIFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGI-HPSLGTFNVLLAGL 473
+F + + T T LI A D+A+ ++ + ++G+ HP +N +++ L
Sbjct: 501 MLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY--AYNSIISTL 558
Query: 474 EKLGRVS 480
K +V+
Sbjct: 559 IKSAKVN 565
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 182/452 (40%), Gaps = 30/452 (6%)
Query: 49 AWLFFNWVSRSR-GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
AW F +S R GF H T +LD+F KR + + D T+ +
Sbjct: 41 AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVL 100
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECY---PTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+ A + + A + EM+ E Y P++ ++ + L + +V A D ++
Sbjct: 101 ITGYCLAREPEEAFAVIREME--EDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTT 158
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
G + +TYT ++++L + K ++A+ + K+ G P A N L+ CK G
Sbjct: 159 NGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 218
Query: 225 IILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
I +LR + +N + Y + L K + E L ++ A+
Sbjct: 219 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM-------------ALRG 265
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+ D ++ +G LL+ + S+ + + D +ST+I+ C R
Sbjct: 266 LVLDTVCYTALIRG----LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
A+ F+ L Y ALI L K E++ +M KA + +L
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 381
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKG 458
I L + V AA+ F + C TY L+ + AG+ D A ++ M
Sbjct: 382 IDGLCKS-GDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSH 440
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
P++ T+ L++GL K +++ A +Y + K
Sbjct: 441 CSPNVVTYGTLISGLCKRRQLTKASLYFQHMK 472
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y AL+ L K+ + +++ ++ G + V LI LG +R A K+F +
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 262
Query: 423 EDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
T YTALI AG +A +YKTM +G P + T + ++ GL K GR+
Sbjct: 263 LRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIG 322
Query: 481 DA-EIYRKEKKSIQADALSKDAV 502
A I+ KS++A L+ + V
Sbjct: 323 AAVRIF----KSMEARGLAPNEV 341
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA L+F + + RG D F Y++++D ++ ++ +F+ M+ G+ ++ T T
Sbjct: 461 LTKASLYFQHM-KERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRT 518
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
++ L A VD AV+++ ++ KE P +Y + + L + +V T
Sbjct: 519 RLIFHLCKANRVDEAVSLFNAIR-KEGMPHPYAYNSIISTLIKSAKVNPCT 568
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 200/492 (40%), Gaps = 30/492 (6%)
Query: 11 ILKYSTWDSAQDLL---KNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNH 64
+++ + WD A+ + + + + T N ++K +KA NW+ +GF+
Sbjct: 99 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWM-WGQGFSP 157
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F+Y T+++ + +S +F+ M E+G+ D Y ++ GD+ A IW
Sbjct: 158 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 217
Query: 125 EEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
E + K YP I SY + L + E+ +++ M + + YTY+ L+ L
Sbjct: 218 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 277
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN--RLALRY 241
+G + A ++ +M E GV PD N ++ +AG + + + M++ R + Y
Sbjct: 278 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 337
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ L DE S +W++ P+ + + +T + LV L
Sbjct: 338 NILIRGLFENAKVDEAIS-IWELLPE-------KDCCADSMTYGV---------LVHGLC 380
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K L S+L + LD+ S++I C R D + K
Sbjct: 381 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPY 440
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA-AKIFSL 420
A+I ++ + M G V LI+ L A R A A + +
Sbjct: 441 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500
Query: 421 LPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L + K TY+ L+ D AL ++ KG P + N+++ GL G+V
Sbjct: 501 LQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 560
Query: 480 SDA-EIYRKEKK 490
DA ++Y + K+
Sbjct: 561 EDALQLYSEMKQ 572
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 4/216 (1%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y++M++ R+ + V + M + G + +V++ A ++ A+ +
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M K C+PT+V+Y + L +R EA + KEM+Q+G PN TY++LM L +
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
K + AL ++ + E G +PD NI+I C +G+ + + MK+
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582
Query: 245 KEALQTF-KVAD-ENDSLLWQVHPQFS--PEFISDN 276
++ F KV D E S +W Q+ P+ IS N
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYN 618
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 17/286 (5%)
Query: 30 KWDSYTVNQVLKTH---PPMEKAWLFF-NWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
K + Y N V+ +E A FF N VS+ G TY T+++ +A+R S
Sbjct: 436 KPNPYVCNAVINGFVRASKLEDALRFFGNMVSK--GCFPTVVTYNTLINGLSKAERFSEA 493
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ + M +KG + +TY+ +M+ L +D A+N+W + K P + + +
Sbjct: 494 YALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 553
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + +V++A +Y EM QR PN T+ LME + +E A +I+ + + G+QPD
Sbjct: 554 LCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPD 613
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
+ NI ++ C + L A+ V A+ + +L +
Sbjct: 614 IISYNITLKGLCSCHRISDAVGFLND------AVDRGVLPTAITWNILVQGYLALKGYME 667
Query: 266 PQFSPEFISDNDAVE-----FVTTDIEGPLSIDQGLVLILLKKKNL 306
P F P + N ++ FV + PL + Q ++ + L + L
Sbjct: 668 PVFVPASMKGNPGMQMRYFGFVCDKLSSPLDVQQPVLCLFLVSETL 713
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 195/487 (40%), Gaps = 34/487 (6%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS------SMKY-- 87
V ++LK+ A F+ V+R G++H + + +L + K ++ SM
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAKNSMPDQA 72
Query: 88 --VFELMQEK-GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+F+ M E G +Y S+++ L + D A + + + P + +Y +K
Sbjct: 73 LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 132
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
I + +A ++ M +G P+ ++Y L+ L + G +AL++F +M E GV P
Sbjct: 133 ISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 192
Query: 205 DKAACNILIEKCCKAGETRTIILIL-RYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
D A NILI+ K G+ I R +K + P + + + D
Sbjct: 193 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 252
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS----------LL 313
H E D + + G ++D + +N V+ D L
Sbjct: 253 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 312
Query: 314 SGIMDKSIQL----DSAVISTIIEVNC------DHRRRDGALLAFEYSVKMDLNLERTAY 363
+G +++ ++L + T++ N ++ + D A+ +E + D + Y
Sbjct: 313 AGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 372
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
L+ L K K I+EE L + + +I+ L R A + + +
Sbjct: 373 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 432
Query: 424 DQKCTATY--TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
Y A+I + A + AL+ + M KG P++ T+N L+ GL K R S+
Sbjct: 433 HGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 492
Query: 482 AEIYRKE 488
A KE
Sbjct: 493 AYALVKE 499
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+++++ +IE N + D A F Y M L+ Y LI I + F K E++
Sbjct: 93 NSLLNALIESN----KWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLN 148
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAG 442
M G S V+ LI+ L A K+F +PE A Y LI +F G
Sbjct: 149 WMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 208
Query: 443 SADKALKIYKTMCR-KGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADAL 497
A +I++ + + ++P++ ++NV++ GL K G+ ++ EI+ + KK+ + L
Sbjct: 209 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDL 265
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + +Y +L F + K++ +LM +G D V+Y +++ L +G+VD A
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + ++K K C P ++SY + L + KEA ++ EM+ +GL P+ TY+ +
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L R + E+A+ F K+Q+ G++P+ N +I CK ET + I + YM N
Sbjct: 450 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 504
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 152/362 (41%), Gaps = 26/362 (7%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
D+A+ ++ D+YT + +++ A + + R R D TYT +L+
Sbjct: 145 DAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCV-PDVVTYTILLE 203
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + + M++KG D VTY V++ + G VD A+ + + C P
Sbjct: 204 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 263
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
VSY +K L +R ++A ++ EM Q+G PPN T+ +L+ +L R G E ALE+
Sbjct: 264 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 323
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTF 251
++ + G P+ + N L+ CK + + L M + Y AL
Sbjct: 324 EQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 383
Query: 252 KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
D LL Q+ + +P IS N ++ +T K A++
Sbjct: 384 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTK-----------------AGKTKEALE 426
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
LL+ ++ K +Q D STI C R + A+ AF M + Y A+I L
Sbjct: 427 -LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 485
Query: 371 IK 372
K
Sbjct: 486 CK 487
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 156/396 (39%), Gaps = 76/396 (19%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY-----MKILFLNDRVKE 154
D + Y ++M AG VD A W C V AY ++ L R
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARR-W-------CAERAVERDAYTCDTLIRGLCGRGRTAN 178
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A V EM++R P+ TYT+L+E + Y++A+++ +M++ G PD N+++
Sbjct: 179 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 238
Query: 215 KCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
C+ G I L+ + + Y + + L T + ++ + L+ ++ + P
Sbjct: 239 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCP- 297
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAVIS 329
P + +++ L +K LV A++ +L I +S +
Sbjct: 298 -----------------PNVVTFNMLISFLCRKGLVEPALE-VLEQIPKYGCSPNSLSYN 339
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++ C ++ D A+ A + +++ +P + +T
Sbjct: 340 PLLHAFCKQKKMDKAM-------------------AFLDLMVSRGCYPDIVSYNTLLTAL 380
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADK 446
S V + L+H+L +D+ C +Y +I AG +
Sbjct: 381 CRSGEVDVAVELLHQL-----------------KDKGCAPVLISYNTVIDGLTKAGKTKE 423
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
AL++ M KG+ P + T++ + AGL + R+ DA
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 459
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 18 DSAQDLLKNLP---IKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
+ A ++L+ +P +S + N +L M+KA F + + SRG D +Y T
Sbjct: 317 EPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV-SRGCYPDIVSYNT 375
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + + + +++KG ++Y +V+ L+ AG A+ + EM K
Sbjct: 376 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 435
Query: 132 CYPTIVSYTAYMKILFLNDRVKEAT----------------------------------- 156
P I++Y+ L DR+++A
Sbjct: 436 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 495
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
D++ MI G PN TYT+L+E L G +EA ++ ++ G
Sbjct: 496 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 180/431 (41%), Gaps = 22/431 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTYTT+L F +A + + +FE M+ +G + T+ +++ N G
Sbjct: 98 KGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTE 157
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++E++K +C P IV++ + + N E + V+KEM + G P T+ L+
Sbjct: 158 MMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 217
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G +++A+ ++ +M EAGV PD ++ N ++ + G + +L MK+ R
Sbjct: 218 SYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKP 277
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L + E + + A E + IE + + LVL+
Sbjct: 278 NELTYCSLLHAYANGKEIERMCAL--------------AEEIYSGIIEPRAVLLKTLVLV 323
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD---L 356
K L+ + + + D ++ ++ + + RR A E M
Sbjct: 324 NSKCDLLMETERAFLELRQRGFSPDITTLNAMVSI---YGRRQMVAKANEILDCMKRGGF 380
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
T Y +L+ + + F + EI+ E+ G + +I+ R A++
Sbjct: 381 TPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASR 440
Query: 417 IFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ S + E TY I Y + +A+ + M + G P+ T+N ++
Sbjct: 441 VLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYC 500
Query: 475 KLGRVSDAEIY 485
KL R +A ++
Sbjct: 501 KLNRRDEASMF 511
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RGF+ D T M+ I+G + ++ + + M+ G TY S+M+ S + +
Sbjct: 341 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 400
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + I E+ K P I+SY + N R+++A+ V EM + G P+ TY
Sbjct: 401 ERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTF 460
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + EA+++ M + G +P+++ N +++ CK
Sbjct: 461 IASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCK 501
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/356 (18%), Positives = 151/356 (42%), Gaps = 31/356 (8%)
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+A ++ +M+++G+ P+ +TYT L+ +AGK + A++IF +M+ G +P+ N LI
Sbjct: 87 DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALI 146
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
+ G+ ++ + +K + + + L F + + F+
Sbjct: 147 KMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFV 206
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLI--LLK---KKNLVAIDSLLSGIMDKSI-QLDSAV 327
+ D + + S DQ + + +L+ +L + +++L+ + + + V
Sbjct: 207 PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKV 266
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA-------------LIGILIKLN 374
++ + + C L Y+ + +ER LA L+ L+ +N
Sbjct: 267 LAEMKDGRCKPNELTYCSLLHAYANGKE--IERMCALAEEIYSGIIEPRAVLLKTLVLVN 324
Query: 375 TFPKVAEIVE------EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
+ K ++E E+ + G S + ++ G + A +I +
Sbjct: 325 S--KCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTP 382
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY +L+ +Y + + +++ +I + + KGI P + ++N ++ + GR+ DA
Sbjct: 383 SLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDA 438
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 5/212 (2%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF--NHDRFTYTTMLDIFGEAKR 81
++N K + T N ++K H K + F + D T+ T+L +FG+
Sbjct: 130 MRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGM 189
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
S + VF+ M+ G + T+ +++ S G D A+ +++ M P + SY A
Sbjct: 190 DSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNA 249
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ L K++ V EM PN TY L+ + E + ++
Sbjct: 250 VLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI 309
Query: 202 VQPDKAACNILI---EKCCKAGETRTIILILR 230
++P L+ KC ET L LR
Sbjct: 310 IEPRAVLLKTLVLVNSKCDLLMETERAFLELR 341
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T+ LI Y GS D+A+ +YK M G++P L ++N +LA L + G K+
Sbjct: 211 TFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGG-------LWKQS 263
Query: 490 KSIQADALSKDAVPMEEKICDLLYG 514
+ + A+ P E C LL+
Sbjct: 264 EKVLAEMKDGRCKPNELTYCSLLHA 288
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + +M K P + +YT + + K A +++EM G PN T+ L++
Sbjct: 88 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 147
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
GK+ E +++F ++ PD N L+ + G + + + MK
Sbjct: 148 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMK 201
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 176/431 (40%), Gaps = 22/431 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG +R TY ++ + + + V ELM + + D TY +++ L N G +
Sbjct: 270 KSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRI 329
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + +EM+ + P +VSY + ++ EA + +EM ++G+ PN T+ ++
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIM 389
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+++ + GK ++A +KM+E+G PD N LI CKAG + M +
Sbjct: 390 VKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNM 449
Query: 238 ALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ L+T K +E LL + FI D V + T
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKR--GYFI---DEVSYGT----------- 493
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L++ K N+ L + +K I + + II C + + A+ ++
Sbjct: 494 -LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L + T Y ++ + K + +M + V+ +L+ L A
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKA 612
Query: 415 AKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F+ K T TY LI G D A + M K + P T+N ++
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 473 LEKLGRVSDAE 483
L GR+ +AE
Sbjct: 673 LTDSGRIREAE 683
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 148/392 (37%), Gaps = 57/392 (14%)
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
GI + T+ V++ AV M C P V+Y + L R+ +A
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDA 262
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
D+ +M RGL PN TY +L+ + G +EA + M + + PD N+LI
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
C G + FK+ DE ++L + P+ +S
Sbjct: 323 LCNEGRIE-------------------------EAFKLRDEMENL------KLLPDVVSY 351
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N T I G L + + LL + +K ++ ++ + +++
Sbjct: 352 N-------TLINGCLEWSK-----------ISEAFKLLEEMSEKGVKPNAVTHNIMVKWY 393
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C + D A + + + Y LI K + ++EM + +
Sbjct: 394 CKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDS 453
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALKI 450
++ L ++ A K+ S + D+ +Y LI YF G+ D+ALK+
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE---VSYGTLIVGYFKDGNVDRALKL 510
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ M K I PS T+N ++ GL + G+ A
Sbjct: 511 WDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D T N +L + +EKA+ F N + + F D FT +L + +
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVEN-SFKPDVFTCNILLRGLCMEGVLEKALKL 615
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F KG ID VTY +++ L G +D A N+ EM+ KE P +Y A + L
Sbjct: 616 FNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTD 675
Query: 149 NDRVKEATDVYKEMIQRGLPPN-----------------------CYTYTVLMEYLVRAG 185
+ R++EA + +M+++G P+ Y+ ++ L G
Sbjct: 676 SGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEG 735
Query: 186 KYEEALEIFSKMQEAGVQPDKAA 208
KY++A+ IF + ++ G+ DK+
Sbjct: 736 KYKDAMRIFGESKQKGITVDKST 758
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 29/185 (15%)
Query: 29 IKWDSYTVNQVLK---THPPMEKAWLFFN-WVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
K D +T N +L+ +EKA FN WVS+ + D TY T++ + R+
Sbjct: 589 FKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAI--DTVTYNTLITSLCKEGRLDD 646
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP---------- 134
+ M+EK + D TY +++ L+++G + A +M K P
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNE 706
Query: 135 -------------TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ V+Y+ ++K L + K+A ++ E Q+G+ + TY LM+ L
Sbjct: 707 TVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGL 766
Query: 182 VRAGK 186
++ K
Sbjct: 767 IKRRK 771
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 134/355 (37%), Gaps = 61/355 (17%)
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
D++ +++ P T + Y V++G+ A +IF KM+ ++P+ CN L+
Sbjct: 122 DLHLSILRLTSPSKALLDTAIGAY-VQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS- 179
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
++RY + ++ F +A++ V + N + +F
Sbjct: 180 -----------LVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKF---K 225
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK-SIQLDSAVISTIIEVN 335
DAVEF+ +M K + D+ +TI++
Sbjct: 226 DAVEFLN--------------------------------VMGKYNCSPDNVTYNTILDTL 253
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R A L R Y L+ K+ + A ++E MT+ V
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313
Query: 396 YLGALLIHRLGSARRPVPAAKI------FSLLPEDQKCTATYTALIGVYFSAGSADKALK 449
+ +LI+ L + R A K+ LLP+ +Y LI +A K
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD----VVSYNTLINGCLEWSKISEAFK 369
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
+ + M KG+ P+ T N+++ K G++ DA I + E+ D ++ + +
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 178/428 (41%), Gaps = 16/428 (3%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTYTT+L F +A + + +FE M+ +G + T+ +++ N G
Sbjct: 370 KGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTE 429
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++E++K +C P IV++ + + N E + V+KEM + G P T+ L+
Sbjct: 430 MMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 489
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G +++A+ ++ +M EAGV PD ++ N ++ + G + +L MK+ R
Sbjct: 490 SYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKP 549
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L + E + + A E + IE + + LVL+
Sbjct: 550 NELTYCSLLHAYANGKEIERMCAL--------------AEEIYSGIIEPRAVLLKTLVLV 595
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K L+ + + + D ++ ++ + + A + +
Sbjct: 596 NSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPS 655
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
T Y +L+ + + F + EI+ E+ G + +I+ R A+++ S
Sbjct: 656 LTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLS 715
Query: 420 LLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E TY I Y + +A+ + M + G P+ T+N ++ KL
Sbjct: 716 EMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLN 775
Query: 478 RVSDAEIY 485
R +A ++
Sbjct: 776 RRDEASMF 783
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 189/457 (41%), Gaps = 81/457 (17%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ I G+ R+S+ + + + G ++D YTS++ ++ G AV ++++M+
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230
Query: 132 CYPTIVSYTAYM-----------KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
C PT+++Y + K++ L DR+K A G+ P+ YTY L+
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSA----------GIAPDSYTYNTLISC 280
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
R YEEA + +M+ AG PDK N L++ K+ ++ + +L+ M+ N
Sbjct: 281 CRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPS 340
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + + D LL DA+E +E +G+
Sbjct: 341 IVTYNSLISAYA----RDGLL--------------EDALELKNQMVE------KGI---- 372
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA---LLAFEYSVKMDLN 357
K ++ +LLSG + D A + E+ R +G + F +KM N
Sbjct: 373 --KPDVFTYTTLLSGF--EKAGKDKAAVQIFEEM-----RNEGCKPNICTFNALIKMHGN 423
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
R + ++ + + TF +IV T L V+ + + + + A
Sbjct: 424 --RGKFTEMMKVFEDIKTFQCSPDIVTWNTL----LSVFGQNGMDSEVSGVFKEMKRA-- 475
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+PE T+ LI Y GS D+A+ +YK M G++P L ++N +LA L + G
Sbjct: 476 -GFVPERD----TFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGG 530
Query: 478 RVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
K+ + + A+ P E C LL+
Sbjct: 531 -------LWKQSEKVLAEMKDGRCKPNELTYCSLLHA 560
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/476 (19%), Positives = 199/476 (41%), Gaps = 30/476 (6%)
Query: 35 TVNQVLKTHPPMEKAW-LFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N +L + M W V R S G D +TY T++ V +
Sbjct: 237 TYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKE 296
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ G + D VTY +++ + A+ + +EM+ C P+IV+Y + + +
Sbjct: 297 MKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGL 356
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+++A ++ +M+++G+ P+ +TYT L+ +AGK + A++IF +M+ G +P+ N
Sbjct: 357 LEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNA 416
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
LI+ G+ ++ + +K + + + L F + +
Sbjct: 417 LIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAG 476
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLI--LLK---KKNLVAIDSLLSGIMDKSIQLDS- 325
F+ + D + + S DQ + + +L+ +L + +++L+ + + S
Sbjct: 477 FVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSE 536
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA-------------LIGILIK 372
V++ + + C L Y+ + +ER LA L+ L+
Sbjct: 537 KVLAEMKDGRCKPNELTYCSLLHAYANGKE--IERMCALAEEIYSGIIEPRAVLLKTLVL 594
Query: 373 LNT----FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
+N+ + E+ + G S + ++ G + A +I +
Sbjct: 595 VNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTP 654
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY +L+ +Y + + +++ +I + + KGI P + ++N ++ + GR+ DA
Sbjct: 655 SLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDA 710
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RGF+ D T M+ I+G + ++ + + M+ G TY S+M+ S + +
Sbjct: 613 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 672
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + I E+ K P I+SY + N R+++A+ V EM + G P+ TY
Sbjct: 673 ERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTF 732
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + EA+++ M + G +P+++ N +++ CK
Sbjct: 733 IASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCK 773
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 1/161 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG-DVDG 119
GF+ D + YT+M+ F R VF+ M+E G +TY +++ G +
Sbjct: 195 GFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNK 254
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
V + + MK P +Y + + +EA V KEM G P+ TY L++
Sbjct: 255 MVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLD 314
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
++ + +EA+E+ +M+ G P N LI + G
Sbjct: 315 VYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDG 355
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 5/212 (2%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF--NHDRFTYTTMLDIFGEAKR 81
++N K + T N ++K H K + F + D T+ T+L +FG+
Sbjct: 402 MRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGM 461
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
S + VF+ M+ G + T+ +++ S G D A+ +++ M P + SY A
Sbjct: 462 DSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNA 521
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ L K++ V EM PN TY L+ + E + ++
Sbjct: 522 VLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI 581
Query: 202 VQPDKAACNILI---EKCCKAGETRTIILILR 230
++P L+ KC ET L LR
Sbjct: 582 IEPRAVLLKTLVLVNSKCDLLMETERAFLELR 613
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 13/217 (5%)
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
SI ++ IL K + A SLL + +D +++I + R A++ F+
Sbjct: 166 SIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKK 225
Query: 351 SVKMDLNLERTAYLALIGILIKLN-TFPKVAEIVEEMTKAGHSLGVYLGALLIH--RLGS 407
++ Y ++ + K+ + K+ +V+ M AG + Y LI R G+
Sbjct: 226 MEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGN 285
Query: 408 ----ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A + K+ P+ TY AL+ VY + + +A+++ + M G PS+
Sbjct: 286 LYEEAAGVLKEMKLAGFSPD----KVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSI 341
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
T+N L++ + G + DA + + +K I+ D +
Sbjct: 342 VTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFT 378
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 182/429 (42%), Gaps = 42/429 (9%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
K L F+ ++GF D+ +Y +L+ + + ++++ D V Y+++
Sbjct: 97 KKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTI 156
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L VD A +++ EM + +P +++YT + L ++ EA + EMI + +
Sbjct: 157 IDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNI 216
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET---RT 224
PN YTY L++ L + GK +E+ + + M + GV+PD +IL++ C GE +
Sbjct: 217 NPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQ 276
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVT 283
I L++ N Y + L K DE +LL + +H P+ ++ +
Sbjct: 277 IFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVT-------YS 329
Query: 284 TDIEGPLSIDQGLVLILLKKK--------NLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ I+G + + ++ L K+ NLV +SLL G+
Sbjct: 330 SLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGL------------------- 370
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C ++ D A+ F + + + Y ALI L K K + + + G+ + V
Sbjct: 371 CKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDV 430
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYK 452
+ ++I L A + S + ED C T+ +I DKA K+
Sbjct: 431 WTYTVMISGLCKEGMFDEALAMKSKM-EDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLH 489
Query: 453 TMCRKGIHP 461
M KG+ P
Sbjct: 490 EMIAKGLLP 498
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 157/390 (40%), Gaps = 29/390 (7%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+++ ++M+ K P +V+ + + ++ + V ++++ G PN LM+
Sbjct: 29 VISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMK 88
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
L G+ +++L K+ G Q D+ + IL+ CK GETR I +LR +++
Sbjct: 89 GLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRP 148
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAV---------------- 279
+ Y + L K+ DE L +++ + P+ I+ +
Sbjct: 149 DVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLL 208
Query: 280 -EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
E + +I + L+ L K+ + +LL+ + K ++ D + S +++ C
Sbjct: 209 NEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLV 268
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
A F V+ +N + +Y +I L K + ++ EM
Sbjct: 269 GEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTY 328
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALKIYKT 453
+ LI L R I L E TY +L+ + DKA+ ++
Sbjct: 329 SSLIDGLCKLGR---ITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMK 385
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
M +GI P+ T+ L+ GL K GR+ +
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRLKKGQ 415
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 175/423 (41%), Gaps = 41/423 (9%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY-PTIVSYTAYMKILFLND 150
M+ KGI D VT + +++ + G + + ++ ++ LK Y P + MK L L
Sbjct: 36 MEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKI-LKLGYQPNTIILNTLMKGLCLKG 94
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
VK++ + +++ +G + +Y +L+ L + G+ A+++ +++ +PD +
Sbjct: 95 EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYS 154
Query: 211 ILIEKCCKA----------GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
+I+ CK E + + L + + + ++ F + +E
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNE---- 210
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK--KNLVAIDSLLS---- 314
+ +P + N ++ + EG + + L+ ++ KK K V I S+L
Sbjct: 211 --MILKNINPNIYTYNTLIDTLCK--EGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYC 266
Query: 315 --GIMDKSIQLDSAVIST-----------IIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
G + K+ Q+ ++ T II C +R D A+ + ++ +
Sbjct: 267 LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV 326
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +LI L KL + ++ +EM G + L+ L + A +F +
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
E Q TYTALI G K +++ + KG + T+ V+++GL K G
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMF 446
Query: 480 SDA 482
+A
Sbjct: 447 DEA 449
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 198/463 (42%), Gaps = 38/463 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + +++ KR+ + + + + +G+ +D V YTS+M AG A
Sbjct: 478 GLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAA 537
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+N+ EEM K +V+Y + L + + EA VY MI+ GL PN TY ++++
Sbjct: 538 LNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKA 596
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ + ALE++++M+ + P CN L+ +AGE + +L M +
Sbjct: 597 YCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPN 656
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ----GL 296
+ + L + + +++L Q+H Q ++ L I+Q L
Sbjct: 657 LVIHRVLLNASSKSGKANAVL-QMHEQL-----------------VDMGLKINQEAYNNL 698
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+++ + + S+L ++ D+ + +I C+ AL + + +
Sbjct: 699 IVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGV 758
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y L+G L+ + E+ ++M + G + LI G + +
Sbjct: 759 SPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIR 818
Query: 417 IF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
++ +P+ T+TY LI + G D+A ++ M +G+ PS T+++L+
Sbjct: 819 LYCEMVAQGFVPK----TSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874
Query: 471 AGLEKLGRVSDAE-----IYRKEKKSIQADALSKDAVPMEEKI 508
G L + D + IYR + K++ + K VP + I
Sbjct: 875 CGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTI 917
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 188/454 (41%), Gaps = 45/454 (9%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D + T++D + +A +S + E M+++G+ D V+Y ++++ G+ D
Sbjct: 140 SGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYD 199
Query: 119 GAVNIWEEM----------------KLKE-----CYPTIVSYTAYMKILFLNDRVKEATD 157
A ++ E+ ++K+ +++YT + ++EA
Sbjct: 200 KAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARA 259
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+Y+EMI G P+ TY+ ++ L + G+ EA E+ +M++ GV P+ A LI+
Sbjct: 260 LYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLF 319
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
KAG + +++L +R + T V D L P+ + +
Sbjct: 320 KAGSAWE-----AFACQSQLVVRGMTLDLVMCTTLV----DGLFKSSKPKEAEDMFRALS 370
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
+ + I ID K ++ ++SLL + +K I + S+II
Sbjct: 371 KLNLIPNSITYTALIDG-----YCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTK 425
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
D A+ + + ++ Y LI K ++ EM +G + L
Sbjct: 426 KGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVL 485
Query: 398 GALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
+L++ L +R A ++ LL + YT+L+ +F AG AL +
Sbjct: 486 FDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDH----VNYTSLMDGFFKAGKESAALNMV 541
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
+ M K I + T+NVL+ GL + G+ +Y
Sbjct: 542 EEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVY 575
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 188/436 (43%), Gaps = 35/436 (8%)
Query: 49 AWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
AW F S+ RG D TT++D ++ + + +F + + + +++TYT+
Sbjct: 324 AWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTA 383
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ GD++ ++ +EM+ K P +++Y++ + + EA +V K+M+ +
Sbjct: 384 LIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQN 443
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ PN Y Y +L++ +AGK E A +++++M+ +G++ + ++L+ +
Sbjct: 444 IIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAE 503
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
+L+ + L L + + + F A + + L V E + + VT ++
Sbjct: 504 ELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVE-----EMTEKSIPFDVVTYNV 558
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
L+ LL+ A S+ SG+++ + + A + +I+ C D AL
Sbjct: 559 ---------LINGLLEHGKYEA-KSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALE 608
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR-- 404
+ + L+ L + K ++ EM+ +G++ L+IHR
Sbjct: 609 LWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS----VMGIHPN-LVIHRVL 663
Query: 405 LGSARRPVPAAKIFSL--------LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
L ++ + A + + L +Q+ Y LI V+ KA + K M R
Sbjct: 664 LNASSKSGKANAVLQMHEQLVDMGLKINQE---AYNNLIVVFCRLRMTKKATSVLKYMIR 720
Query: 457 KGIHPSLGTFNVLLAG 472
G T+N L+ G
Sbjct: 721 DGFVADTVTYNALIRG 736
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 166/428 (38%), Gaps = 58/428 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
GF D TY+++++ + R+S + + M++ G++ + V YT+++ L AG
Sbjct: 267 NGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWE 326
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ ++ +V T + LF + + KEA D+++ + + L PN TYT L++
Sbjct: 327 AFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALID 386
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G E + +M+E + P+ + +I K G I +++ M + +
Sbjct: 387 GYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIP 446
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
V+ + + A + + + TD+ + + GL
Sbjct: 447 NAYVYAILIDGYCKAGKQE-----------------------IATDLYNEMKL-SGL--- 479
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K N V D L++ + +R D A + L L+
Sbjct: 480 ---KVNNVLFDVLVNNLKRG-------------------KRMDEAEELLKDVTSRGLLLD 517
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG-----HSLGVYLGALLIHRLGSARRPVPA 414
Y +L+ K +VEEMT+ + V + LL H A+
Sbjct: 518 HVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSG 577
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
L P ATY +I Y G D AL+++ M I PS T N L+ GL
Sbjct: 578 MIEMGLAPNQ----ATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLS 633
Query: 475 KLGRVSDA 482
+ G + A
Sbjct: 634 EAGEIEKA 641
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 164/409 (40%), Gaps = 40/409 (9%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE-CYPTIVSY 139
++ ++ +L++ + +D VTY +V+ G V+ A M K+ C+ TI
Sbjct: 57 KMGNLILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITC- 115
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+K K + ++ G + + L++ +AG+ AL++ +M++
Sbjct: 116 NILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRK 175
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
G+ D + N LI CK GE +L + E+R ++ VF F + D
Sbjct: 176 EGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESR-GVKDSVF------FNIDDR--- 225
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
I +D + ++E L ++ K+ L +L ++
Sbjct: 226 -------------IKKDDNL-----NLEADLITYTTIISTYCKQHGLEEARALYEEMIIN 267
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
D S+I+ C R A KM ++ AY LI L K + +
Sbjct: 268 GFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEA 327
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTA 433
++ G +L + + L+ L + +P A +F +L+P + TYTA
Sbjct: 328 FACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPN----SITYTA 383
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
LI Y G ++ + + M K I+P++ T++ ++ G K G + +A
Sbjct: 384 LIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEA 432
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 134/352 (38%), Gaps = 80/352 (22%)
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V + D+Y EM+ +PPN YT+ VL+ + G AL++ ++ V+ D N
Sbjct: 26 VSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDL---LRNVDVEVDTVTYNT 82
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
+I C+ G L M
Sbjct: 83 VIWGFCQHGLVNQAFGFLSIM--------------------------------------- 103
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ + + +T +I + +G I L K +D+L+SG K D +T+
Sbjct: 104 -VKKDTCFDTITCNI-----LVKGFCRIGLAKYGERIMDNLVSGGTCK----DVIGFNTL 153
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I DG A E S+ +DL +ER L+ ++ NT E KA
Sbjct: 154 I---------DGYCKAGEMSLALDL-VERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKS 203
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSL---LPEDQKCT-----ATYTALIGVYFSAGS 443
L+H + S R V + F++ + +D TYT +I Y
Sbjct: 204 ---------LLHEI-SESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHG 253
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
++A +Y+ M G P + T++ ++ GL K GR+S+A+ +E K + D
Sbjct: 254 LEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVD 305
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 13 KYSTWDSAQDL---LKNLPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDR 66
K D+A +L +K+ I S T N + L +EKA N +S G + +
Sbjct: 599 KQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS-VMGIHPNL 657
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ +L+ ++ + +++ + E + + G+ I+ Y +++ A ++ +
Sbjct: 658 VIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKY 717
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M V+Y A ++ + VK+A Y +M+ G+ PN TY +L+ L+ AG
Sbjct: 718 MIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGL 777
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
E E+F KM+E G+ PD + + LI K G + I
Sbjct: 778 MAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESI 817
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 144/341 (42%), Gaps = 24/341 (7%)
Query: 54 NWVS--RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
NW + RG D TYT +++ A + + V + M++KG+++DAVTYT ++
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G + A + +M K P +V+YTA L V A ++ EM +GL N
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
+TY L+ L +AG E+A+ M EAG++PD +I C++ E +L+
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555
Query: 232 MKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
M + + + + F +V L W + P + N ++ +
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE-- 613
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
KN+ + + G++ + + + + +I+ +C R AL
Sbjct: 614 ----------------KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
++ L ++Y ALI +L K F + + E+M K
Sbjct: 658 HSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 199/487 (40%), Gaps = 35/487 (7%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
L+ I + N VL P E LF + + +Y +L A RI
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEK------NTCSYNILLKALCTAGRIK 270
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+F+ M D VTY ++H +++ A+ + EM + V+YT+ +
Sbjct: 271 DAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+L +V +A V ++M+ G+ + +T +M R G A F +MQ+ G+
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLA 387
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSL 260
D LI C+AGE + +L+ M++ L A+ Y V + KV
Sbjct: 388 ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY--CKVG------ 439
Query: 261 LWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ + F+ N V+ VT ++ ++ GL K+ ++ A + LL + K
Sbjct: 440 ------KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC----KQGDVCAANELLHEMCSK 489
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
++L+ +++I C + A+ + L + Y +IG L + +
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGV 437
+++EM G + +L++ + R ++ + E T TY +L+
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQAD 495
Y + +IYK M + + P+ T+N+L+ G K + +A + E +K +
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 496 ALSKDAV 502
A S +A+
Sbjct: 670 ASSYNAL 676
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +TYTT++ ++K + + + M +KGI VTY +M+ +G V+G
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ E M K +P +Y + MK + +K T++YK M+ + + PN TY +L++
Sbjct: 585 KRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+A +EAL S+M E G + ++ N LI K + + M++ RL
Sbjct: 645 HCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAE 704
Query: 241 YPVFK 245
V+
Sbjct: 705 PDVYN 709
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 178/428 (41%), Gaps = 55/428 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +H+ +TY +++ F R+S + M + G D VT S+++ + + A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + ++M P V++T + LFL+++ EA + M+QRG P+ TY ++
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--- 237
L + G + AL + +KM+ A ++ + + +I+ CK + + M+ +
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 238 ALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y L + + +D + L + + +P ++ + L
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS------------------AL 329
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ +KK LV + L ++ +SI + S++I C R A E ++ D
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y LI K K E+ EM++ G +G+
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG-------------LVGN--------- 427
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
T TYT LI +F A D A ++K M G+HP++ T+N+LL GL K
Sbjct: 428 -----------TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 477 GRVSDAEI 484
G+++ A +
Sbjct: 477 GKLAKAMV 484
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 11 ILKYSTWDSAQDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+ Y W A LL ++ + S ++ +K ++ L+ + RS +
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS--ID 355
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
+ FTY+++++ F R+ K + ELM K + VTY ++++ A VD + +
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM + V+YT + F A V+K+M+ G+ PN TY +L++ L +
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK +A+ +F +Q + ++PD NI+IE CKAG+
Sbjct: 476 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N + T++ ++D F + ++ + ++E M ++ I+ + TY+S+++ +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + E M K+C P +V+Y + RV + ++++EM QRGL N TYT L+
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+A + A +F +M GV P+ NIL++ CK G+ +++ Y++ + +
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/469 (19%), Positives = 187/469 (39%), Gaps = 63/469 (13%)
Query: 33 SYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
SY +VL+T ++ A F +++SR F ++ +L + + +
Sbjct: 43 SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPF-PSIIEFSKLLSAIAKMNKFDLVISFG 101
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
E M+ GI+ + TY +++ + A+ + +M P IV+ + +
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+R+ +A + +M++ G P+ T+T L+ L K EA+ + +M + G QPD
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
++ CK G+T + +L M+ ++ ++ + DSL H
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI---------DSLCKYRH---- 268
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
++DA+ +L + + +K ++ + S
Sbjct: 269 -----EDDAL-------------------------------NLFTEMENKGVRPNVITYS 292
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++I C++ R A ++ +N + ALI +K K ++ EEM K
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 390 GHSLGVYL------GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
++ G ++ RLG A++ + LP TY LI + A
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN----VVTYNTLINGFCKAKR 408
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
DK +++++ M ++G+ + T+ L+ G + +A++ K+ S+
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 72/121 (59%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ F +AKR+ +F M ++G+ + VTYT+++H A D D A ++++M
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+P I++Y + L N ++ +A V++ + + + P+ YTY +++E + +AGK+
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Query: 188 E 188
+
Sbjct: 515 K 515
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 170/407 (41%), Gaps = 49/407 (12%)
Query: 32 DSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNH--DRFTYTTMLDIFGE-------- 78
D ++ N +LK ++A + ++ RG D +Y T+L+ F +
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLT 221
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A+ + V M + G+ D +TY S++H ++G A+ ++M+ P +V+
Sbjct: 222 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 281
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y++ M L N R EA ++ M +RGL P+ TY L++ + G+ E+ ++F M
Sbjct: 282 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMV 341
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADEN 257
GV+PD N LI+ CC AG+ +L M + + + + +V+ +
Sbjct: 342 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 401
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
D+L E +S + +T +I I QG L + A L I
Sbjct: 402 DAL------ALFKEMVSSGVSPNIITYNI-----ILQG----LFHTRRTAAAKELYVSIT 446
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
QL+ + + I+ C + D AL F+ DL LE + +IG L+K
Sbjct: 447 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 506
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
+ ++ A H SA VP + +SL+ E+
Sbjct: 507 EAKDLF-----AAH---------------SANGLVPDVRTYSLMAEN 533
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/430 (19%), Positives = 176/430 (40%), Gaps = 28/430 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI-WEE 126
TY ++ A R+ + +KG +DA+T+T ++ L A++I
Sbjct: 94 TYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRR 153
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR---GLPPNCYTYTVLMEYLVR 183
M C P + SY +K L +R +EA ++ M G PP+ +Y ++ +
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 184 AG--------KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
G ++A+E+ + M + GV PD N ++ C +G+ + I L+ M+ +
Sbjct: 214 EGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 273
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + + + L + I D+ + DI ++ QG
Sbjct: 274 GVEPNVVTYSSLM----------NYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 323
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K+ ++ + L ++ ++ D +T+I+ C + D A V +
Sbjct: 324 HC----KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 379
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ + Y LI +++ + +EM +G S + +++ L RR A
Sbjct: 380 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 439
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+++ + + Q +TY ++ D+AL++++ +C + TFN+++ L
Sbjct: 440 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 499
Query: 474 EKLGRVSDAE 483
K GR+ +A+
Sbjct: 500 LKCGRMDEAK 509
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 143/373 (38%), Gaps = 71/373 (19%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
PT+ +Y + R+ ++++G + T+T L++ L + +A++I
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 194 -FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP---------- 242
+M E G PD + N L++ C ++ + +L M ++R P
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 243 -VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
FKE +QT A D A+E + T ++ + D
Sbjct: 210 GFFKEGIQTKLTAQAMDK------------------AMEVLNTMVKNGVMPD-------- 243
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
+ +S+L G S Q A I T+ ++ R DG E +V
Sbjct: 244 ----CMTYNSILHGYC-SSGQPKEA-IGTLKKM-----RSDGV----EPNV--------V 280
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +L+ L K + +I + MTK G + L+ R + + K+F L+
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLM 340
Query: 422 ------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
P+ TY LI AG D+A K+ +M G+ P + T+ L+ G +
Sbjct: 341 VRIGVKPD----IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396
Query: 476 LGRVSDAEIYRKE 488
+ R+ DA KE
Sbjct: 397 VSRMDDALALFKE 409
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 144/341 (42%), Gaps = 24/341 (7%)
Query: 54 NWVS--RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
NW + RG D TYT +++ A + + V + M++KG+++DAVTYT ++
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G + A + +M K P +V+YTA L V A ++ EM +GL N
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
+TY L+ L +AG E+A+ M EAG++PD +I C++ E +L+
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555
Query: 232 MKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
M + + + + F +V L W + P + N ++ +
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE-- 613
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
KN+ + + G++ + + + + +I+ +C R AL
Sbjct: 614 ----------------KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
++ L ++Y ALI +L K F + + E+M K
Sbjct: 658 HSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 199/487 (40%), Gaps = 35/487 (7%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
L+ I + N VL P E LF + + +Y +L A RI
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEK------NTCSYNILLKALCTAGRIK 270
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+F+ M D VTY ++H +++ A+ + EM + V+YT+ +
Sbjct: 271 DAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+L +V +A V ++M+ G+ + +T +M R G A F +MQ+ G+
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLA 387
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSL 260
D LI C+AGE + +L+ M++ L A+ Y V + KV
Sbjct: 388 ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY--CKVG------ 439
Query: 261 LWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ + F+ N V+ VT ++ ++ GL K+ ++ A + LL + K
Sbjct: 440 ------KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC----KQGDVCAANELLHEMCSK 489
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
++L+ +++I C + A+ + L + Y +IG L + +
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGV 437
+++EM G + +L++ + R ++ + E T TY +L+
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQAD 495
Y + +IYK M + + P+ T+N+L+ G K + +A + E +K +
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 496 ALSKDAV 502
A S +A+
Sbjct: 670 ASSYNAL 676
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +TYTT++ ++K + + + M +KGI VTY +M+ +G V+G
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ E M K +P +Y + MK + +K T++YK M+ + + PN TY +L++
Sbjct: 585 KRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+A +EAL S+M E G + ++ N LI K + + M+++RL
Sbjct: 645 HCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAE 704
Query: 241 YPVFK 245
V+
Sbjct: 705 PDVYN 709
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 4/219 (1%)
Query: 1 MRDTISNVYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS 59
+ DTI +++ W + Q+ +++L +WD V VL +E A FF W RS
Sbjct: 86 LEDTIC---RMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERS 142
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
HDR T+ M+ + GE ++++ + + M EKG+ D + ++ AG V
Sbjct: 143 GLIRHDRDTHMKMIKMLGEVQKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQE 202
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+V I+++MK TI SY K++ R A + +M+ G+ P +TY +++
Sbjct: 203 SVKIFQKMKDLGVERTIKSYNTLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 262
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + E AL F M+ G+ PD N +I C+
Sbjct: 263 GFFLSLRLETALRFFDDMKTRGISPDAVTYNTIINGYCR 301
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A +FN + S G R TY ML F + R+ + F+ M+ +GI+ DAVTY +++
Sbjct: 238 AKRYFNKMV-SEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNTII 296
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ +D A ++ EMK P++V+YT +K DRV + +++EM G+
Sbjct: 297 NGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGIE 356
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIIL 227
PN TY+ L+ L GK EA I M + P D + L+ KAG+
Sbjct: 357 PNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATE 416
Query: 228 ILRYM 232
+L+ M
Sbjct: 417 VLKAM 421
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A FF+ + ++RG + D TY T+++ + K++ + +F M+ VTYT
Sbjct: 270 LETALRFFDDM-KTRGISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYT 328
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ + VD + I+EEM+ P +Y+ + L ++ EA ++ K M+ +
Sbjct: 329 TMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAK 388
Query: 166 GLPPNCYTYTVLMEYLV---RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ P ++ ++ LV +AG A E+ M V + +LIE CKA
Sbjct: 389 HIAPK--DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAY 446
Query: 223 RTIILILRYMKENRLALRY 241
I +L + E + LR+
Sbjct: 447 NRAIKLLDTLIEKEIILRH 465
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 180/438 (41%), Gaps = 79/438 (18%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR--FTYTTMLDIFGEA 79
D +K I D+ T N ++ + +K +G N + TYTTM+ +
Sbjct: 278 DDMKTRGISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSV 337
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
R+ +FE M+ GI +A TY++++ L + G + A NI + M K P
Sbjct: 338 DRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPK--DN 395
Query: 140 TAYMKILFLNDRVKE---ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI--- 193
+ ++K+L + + AT+V K M +P Y VL+E +A Y A+++
Sbjct: 396 SIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDT 455
Query: 194 ----------------------------------------FSKMQEAGVQPDKAACNILI 213
F ++ + GVQ D+ A N LI
Sbjct: 456 LIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLI 514
Query: 214 EKCCKAGETRTIILILRYMKEN---RLALRYPVF-KEALQTFKVADENDSLLWQVHPQFS 269
K G + IL+ M R A Y + K + + D +L V
Sbjct: 515 RGHAKEGNPESSYEILKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHV 574
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK-------NLVA--IDSLL-SGIMDK 319
P+ +E + D G + +++I++ K +L+A +++LL G +++
Sbjct: 575 PDSALFRSVIESLFED--GRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEE 632
Query: 320 SI-QLD-------SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY----LALI 367
++ ++D +A + +++ V + + AL ++ ++ DL+L+ ++Y AL+
Sbjct: 633 ALGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLDFSSYDKVLDALL 692
Query: 368 GILIKLNTFPKVAEIVEE 385
G LN + + +I+E+
Sbjct: 693 GAGKTLNAYSVLCKIMEK 710
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ TYT +I Y S D L+I++ M GI P+ T++ LL GL +G++ +A
Sbjct: 321 EPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEA-- 378
Query: 485 YRKEKKSIQADALSKDAVPMEEKI 508
K+I + ++K P + I
Sbjct: 379 -----KNILKNMMAKHIAPKDNSI 397
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 151/354 (42%), Gaps = 28/354 (7%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
D+A+ L+ ++P++ D+YT N +++ A + R RG D TYT +L+
Sbjct: 151 DAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR-RGCLPDVVTYTILLE 209
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + + M +KG D VTY V++ + G V+ A+ + + C P
Sbjct: 210 ATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEP 269
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
VSY +K LF +R ++A + +EM +G PPN T+ +L+ +L R G E A+E+
Sbjct: 270 NTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVL 329
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTF 251
+M + G P+ + N L+ CK + + + M + Y AL
Sbjct: 330 EQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRN 389
Query: 252 KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
D LL Q+ + SP IS N ++ GL K+ L +D
Sbjct: 390 GEVDVAIELLHQLKDKGCSPVLISYNTVID--------------GLTKAGKTKEALELLD 435
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ S K +Q D STI C R + A+ F D+ + TA L
Sbjct: 436 EMTS----KGLQPDIITYSTIASGLCREDRIEEAVRTF--CKVQDMGIRPTAAL 483
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K+I ELM +G D V+Y +++ L G+VD A
Sbjct: 336 GCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVA 395
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++K K C P ++SY + L + KEA ++ EM +GL P+ TY+ +
Sbjct: 396 IELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASG 455
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L R + EEA+ F K+Q+ G++P A N ++ CK ET I + YM
Sbjct: 456 LCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYM 507
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 18 DSAQDLLKNLP---IKWDSYTVNQVL-------KTHPPMEKAWLFFNWVSRSRGFNHDRF 67
+ A ++L+ +P +S + N +L K H ME L SRG D
Sbjct: 323 EPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV-----SRGCYPDIV 377
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y T+L + + +++KG + ++Y +V+ L+ AG A+ + +EM
Sbjct: 378 SYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM 437
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P I++Y+ L DR++EA + ++ G+ P Y ++ L + +
Sbjct: 438 TSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRET 497
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE 214
A+++F+ M +G P+++ IL+E
Sbjct: 498 HNAIDLFAYMISSGCMPNESTYTILVE 524
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/390 (17%), Positives = 157/390 (40%), Gaps = 64/390 (16%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D + Y +++ AG +D A + +M ++ P +Y ++ L R A V
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVADMPVE---PDAYTYNTLIRGLCGRGRTSNALAVL 189
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
++M +RG P+ TYT+L+E + Y++A+++ +M + G PD N+++ C+
Sbjct: 190 EDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249
Query: 220 GETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISD 275
G + L+ + + Y + + L T + ++ + L+ ++ H P ++
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N + F+ +GLV ++ +L + +S + ++
Sbjct: 310 NMLISFLCR---------RGLVEPAME---------VLEQMPQYGCTPNSLSYNPLLHAF 351
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C ++ A+ + +++ +P + +T + V
Sbjct: 352 CKQKKIHKAM-------------------EFVELMVSRGCYPDIVSYNTLLTALCRNGEV 392
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYK 452
+ L+H+L +D+ C+ +Y +I AG +AL++
Sbjct: 393 DVAIELLHQL-----------------KDKGCSPVLISYNTVIDGLTKAGKTKEALELLD 435
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M KG+ P + T++ + +GL + R+ +A
Sbjct: 436 EMTSKGLQPDIITYSTIASGLCREDRIEEA 465
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 34/228 (14%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
P A FFNW + GF H Y M+D+ G+ K+ Y+ +LM+ + + I VT+
Sbjct: 127 PFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTF 186
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR------------- 151
+ ++ AG AV+ + M+ C I++++ + IL R
Sbjct: 187 SMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKH 246
Query: 152 ---------------------VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ EA V++EM G+ PN YTY+++++ L R+G+ A
Sbjct: 247 KFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRA 306
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
++F++M +AG P+ N LI +AG T ++ + MK R A
Sbjct: 307 HDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCA 354
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N D ++ ++ I + +R + F+ ++ K D + YTS++H AGD+ A
Sbjct: 213 GCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDISEA 271
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ EMK+ P + +Y+ + L + ++ A DV+ EM+ G PN T+ L+
Sbjct: 272 ESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRV 331
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+RAG+ E+ L+++++M+ D N LIE CK I +L M +N
Sbjct: 332 HLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKN 386
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 88/191 (46%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + +TY+ ++D + +I+ VF M + G N ++VT+ +++ AG +
Sbjct: 282 GISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKV 341
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +MK C +++Y ++ +D + EA V M + PN ++ +
Sbjct: 342 LQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRC 401
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ ++ A +F++M+E G +P+ NIL+ I + + M E +
Sbjct: 402 IAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPN 461
Query: 241 YPVFKEALQTF 251
+ ++E + +
Sbjct: 462 FNTYRELIALY 472
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 12/218 (5%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D YT+++ + A IS + VF M+ GI+ + TY+ V+ L +G + A
Sbjct: 248 FEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAH 307
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+++ EM C P V++ +++ R ++ VY +M + + TY L+E
Sbjct: 308 DVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETH 367
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE------- 234
+ EA+++ + M + P+ ++ N + K+ + + MKE
Sbjct: 368 CKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNT 427
Query: 235 ---NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
N L + V K A FK+ E D +V P F+
Sbjct: 428 VTYNILMRMFAVPKSADMIFKLKKEMDE--EEVEPNFN 463
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 77/197 (39%), Gaps = 1/197 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N + T+ ++ + A R + V+ M+ D +TY ++ ++ A
Sbjct: 317 GCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEA 376
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + M +C P S+ + + + V A ++ M + G PN TY +LM
Sbjct: 377 IKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRM 436
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-KENRLAL 239
+ ++ +M E V+P+ LI C G + R M E +
Sbjct: 437 FAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKP 496
Query: 240 RYPVFKEALQTFKVADE 256
P++K L+ + A +
Sbjct: 497 SMPLYKMVLEELRKAGQ 513
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 5/156 (3%)
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
D D S +I + C RR A F+ ++K + Y +L+ +
Sbjct: 211 DYGCNADIIAFSNVISILCKKRRAVEAQSFFD-NLKHKFEPDVIVYTSLVHGWCRAGDIS 269
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTAL 434
+ + EM AG S VY +++I L + + A +F+ + D C + T+ L
Sbjct: 270 EAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEM-LDAGCNPNSVTFNNL 328
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
I V+ AG +K L++Y M R L T+N L+
Sbjct: 329 IRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLI 364
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/489 (20%), Positives = 198/489 (40%), Gaps = 65/489 (13%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ K +ST S + + I D YT+ V+ + + + F+ +++ H
Sbjct: 77 LTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGH 136
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I ++F+ M +G + VTY ++++ L G+ A+
Sbjct: 137 QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M+ C P +V ++ + L + +V EA +++ EMI +G+ PN TY L+ L
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ +++ + ++M ++ + PD N +++ CK G
Sbjct: 257 KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEG---------------------- 294
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
VA+ +D + +H P ++ N ++ E +++ V +
Sbjct: 295 ---------MVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK---VFDTMV 342
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K+ VA VIS T+I C + D A+ FE + +L
Sbjct: 343 HKDCVA-----------------NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI L + + EM G + L L R A +
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445
Query: 421 L------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ P+ Q YT ++ AG + A ++ + KG+ P++ T+N+++ GL
Sbjct: 446 IEGSNWDPDIQ----IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501
Query: 475 KLGRVSDAE 483
K G +++A
Sbjct: 502 KQGLLAEAS 510
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 158/407 (38%), Gaps = 94/407 (23%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY---- 172
+D A++ + M K+ P+ V + + + + ++M G+PP+ Y
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 173 -------------------------------TYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
T+T L+ L GK EAL +F KM G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
QP+ LI CK G T I +LR M++ VF + DSL
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI---------DSLC 221
Query: 262 --WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
QV F N E +T I + L+ L K + +L++ ++D
Sbjct: 222 KDRQVTEAF-------NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
I D ++T+++ C ++G ++A + V +D+ + R G+ + T+ +
Sbjct: 275 KIMPDVFTLNTVVDALC----KEG-MVAEAHDV-VDMMIHR-------GVEPNVVTYNAL 321
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP-AAKIFSLLPEDQKCTA---TYTALI 435
+ GH L R V A K+F + + C A +Y LI
Sbjct: 322 MD--------GHCL---------------RNEVDVAVKVFDTMVH-KDCVANVISYNTLI 357
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y S DKA+ +++ M R+ + P+ T+N L+ GL +GR+ DA
Sbjct: 358 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA F +SR + TY T++ R+ +F M +G D VTY
Sbjct: 366 VDKAMYLFEEMSRQE-LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYR 424
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ +L +D A+ + + ++ P I YT + + +++A D++ + +
Sbjct: 425 TLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN +TY +++ L + G EA ++FS+M + G P+ N++ + E
Sbjct: 485 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT 544
Query: 226 ILILRYM 232
I +L M
Sbjct: 545 IELLEEM 551
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 136/343 (39%), Gaps = 53/343 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM--HWLSNAGDVDGAVN 122
D FT T++D + ++ V ++M +G+ + VTY ++M H L N +VD AV
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN--EVDVAVK 336
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+++ M K+C ++SY + V +A +++EM ++ L PN TY L+ L
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
G+ ++A+ +F +M G PD L + CK NR
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK----------------NRH----- 435
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+A+ K + ++ W D D ++ TT ++G + +
Sbjct: 436 -LDKAMALLKAIEGSN---W------------DPD-IQIYTTILDG-----------MCR 467
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
L L S + K +Q + + +I C A F K +
Sbjct: 468 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 527
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
Y + ++ N + E++EEM G S+ V LL+ L
Sbjct: 528 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGML 570
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 77/171 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D TY T+ D + + + + + ++ + D YT+++ + AG+++
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + K P + +Y + L + EA+ ++ EM + G PN TY ++
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+R + +E+ +M G D + +L+ G +++ IL
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YTT+LD A + + +F + KG+ + TY ++H L G + A ++ EM
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P +Y + N+ ++ +EM+ RG + T T+L+ L G +
Sbjct: 518 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 577
Query: 189 EALEIFSK 196
+I K
Sbjct: 578 SVKQILCK 585
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 194/456 (42%), Gaps = 48/456 (10%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG+ + TYTT++ RIS +F MQ+ G +AVTY +++ L G+V+
Sbjct: 155 RGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNI 214
Query: 120 AVNIWEEMKLK------ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
A+ + +EM C P +++Y+ + L R EA ++++EM +G+ P+ +
Sbjct: 215 ALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVIS 274
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
Y+ L+ AGK++++ +F +M + GVQPD ++LI+ CK G+ +L M
Sbjct: 275 YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI 334
Query: 234 ENRLALRYPVFKEALQTF-KVADENDS---LLWQVHPQFSPEFISDNDAVEFVTTDIEG- 288
+ + + + F V D N + L P+ IS TT I G
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEIS-------YTTLINGY 387
Query: 289 --PLSIDQGL-----VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+ + + +L + K N+ +LL G+ K D+ + +++
Sbjct: 388 CKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT------- 440
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
Y V + + Y + L K + + E+ E+ L + + L
Sbjct: 441 --------YGVSANSQI----YGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCL 488
Query: 402 IHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
I L A + A ++F L ++ Q TY +I + G D A +++ M G
Sbjct: 489 IDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGC 548
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
P + +N LL G + ++ E+ + K +Q D
Sbjct: 549 TPDIIAYNTLLCGFCEGNKLE--EVIKLLHKMVQKD 582
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/469 (20%), Positives = 192/469 (40%), Gaps = 33/469 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + D FT + + + R+S + +G + VTYT+++ L +
Sbjct: 118 RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRI 177
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI----QRGL--PPNC 171
A ++ M+ C P V+Y +K L V A ++KEM+ Q G+ P
Sbjct: 178 SEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGV 237
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
TY+++++ L + G+ +EA E+F +M+ G+ PD + + LI C AG+ +
Sbjct: 238 ITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDE 297
Query: 232 MKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
M + + F + T KV + L + P I+ N ++
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLID------- 350
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
G ++ +L + L + K ++ D +T+I C + A+
Sbjct: 351 -------GFCMV----GDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNL 399
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+ +++ + T Y L+ L + ++ M G S + + + L
Sbjct: 400 YNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCK 459
Query: 408 ARRPVPAAKIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
A ++F+ L + Y+ LI AG + A ++++ + ++G+ P + T
Sbjct: 460 NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519
Query: 466 FNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
+N+++ G K+G+V +A I ++ ++ + + D + +C G
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEK---MEENGCTPDIIAYNTLLCGFCEG 565
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 165/442 (37%), Gaps = 74/442 (16%)
Query: 61 GFNHDRFTYTTMLDIF------GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
FN + ++ L +F G I + + F+LM ++ ++ L+
Sbjct: 46 AFNREEISFHHPLSLFLRNCKTGNITAIQAFHF-FDLMMRSHPIPPISSFNRLLGGLAKI 104
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
+++ EM+L P + + + L +RV EA +++RG PN TY
Sbjct: 105 NHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTY 164
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
T L++ L + EA +F +MQ+ G P+ LI+ C+ G + + + M
Sbjct: 165 TTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLN 224
Query: 235 NRL---------ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTT 284
+ + Y + + L DE L ++ Q P+ IS +T
Sbjct: 225 DASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVIS-------YST 277
Query: 285 DIEGPLSI---DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
I G DQ L ++D+ +Q D S +I+ C +
Sbjct: 278 LIHGFCCAGKWDQS--------------KHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKV 323
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
A E ++ GI+ L T+ + + G +
Sbjct: 324 TEAKKLLEVMIQR-------------GIVPNLITYNSLID----------------GFCM 354
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
+ L SAR + L P++ +YT LI Y +A+ +Y M + G P
Sbjct: 355 VGDLNSARELFLSMPSKGLEPDE----ISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP 410
Query: 462 SLGTFNVLLAGLEKLGRVSDAE 483
++ T+ LL GL + G+V DA+
Sbjct: 411 NVTTYGTLLKGLFQKGKVGDAK 432
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A FN + +S F + Y+ ++D +A ++ + +FE + ++G+ D VTY +
Sbjct: 465 EAMELFNEL-KSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIM 523
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H G VD A ++E+M+ C P I++Y + ++++E + +M+Q+ +
Sbjct: 524 IHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDV 583
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
PN + T++++ L + KY++ +++ K
Sbjct: 584 SPNAASCTIVVDMLCKDEKYKKFVDLLPK 612
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 148/336 (44%), Gaps = 24/336 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++G D +Y+T++ F A + K++F+ M ++G+ D VT++ ++ L G V
Sbjct: 264 KAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKV 323
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + E M + P +++Y + + + + A +++ M +GL P+ +YT L
Sbjct: 324 TEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTL 383
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KCCKAGETRTIILILRYMKE 234
+ + K +EA+ ++++M + G P+ L++ + K G+ + + +++
Sbjct: 384 INGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGV 443
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + Y +F + L +ND L + E ++ + F L+I+
Sbjct: 444 SANSQIYGIFLDGLC------KNDCLFEAM------ELFNELKSYNF-------KLNIEN 484
Query: 295 GLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
LI L K L L + + +Q D + +I C + D A + FE
Sbjct: 485 YSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKME 544
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ + AY L+ + N +V +++ +M +
Sbjct: 545 ENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQ 580
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 75/163 (46%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V ++ G + + Y LD + + +F ++ ++ Y+ ++ L AG
Sbjct: 437 VMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG 496
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++ A ++E++ + P +V+Y + +V A ++++M + G P+ Y
Sbjct: 497 KLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYN 556
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
L+ K EE +++ KM + V P+ A+C I+++ CK
Sbjct: 557 TLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 182/476 (38%), Gaps = 57/476 (11%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYT---VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
+ +SA+ L +P+ ++YT V + L + A + + R RG Y
Sbjct: 139 RAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR-RGCAPIPPMY 197
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+L+ S V E + +G +D V++ + + G VD A+++ ++
Sbjct: 198 HVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS 257
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
C P +VSY A +K L + R ++ +EM++ PPN T+ L+ YL R G +E
Sbjct: 258 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 317
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
E+ ++M E G PD +I+ CK G IL M L + L+
Sbjct: 318 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 377
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
A+ W+
Sbjct: 378 GLCSAER-----WE--------------------------------------------ET 388
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+ LL+ + DK LD + +++ C + D + E ++ + Y +I
Sbjct: 389 EELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVING 448
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC-- 427
K + +++ MT G +++ L SA R V A + S + + Q C
Sbjct: 449 FCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ-QGCPL 507
Query: 428 -TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T+ LI G ++A+++ K M G P L +++ ++ GL K G+ +A
Sbjct: 508 NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEA 563
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 88/168 (52%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++D F + + + + E M E G D +TYT+V++ G +D AV +
Sbjct: 403 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 462
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M C P +SYT +K L +R +A D+ +MIQ+G P N T+ L+ +L +
Sbjct: 463 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 522
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
G E+A+E+ +M G PD + + +I+ KAG+T + +L M
Sbjct: 523 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM 570
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +YT +L A+R + + M ++G ++ +T+ +++++L G V+ A
Sbjct: 469 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 528
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++M + C P ++SY+ + L + EA ++ M+ +G+ PN Y+ +
Sbjct: 529 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 588
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L R G+ + +++F +Q+ ++ D N +I CK GET I L YM
Sbjct: 589 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYM 640
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 134/336 (39%), Gaps = 22/336 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + Y T+L A+R + + M +K +D VT+ ++ + G VD
Sbjct: 362 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVD 421
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + E+M C P +++YT + + EA + K M G PN +YT+++
Sbjct: 422 RVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVL 481
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L A ++ +A ++ S+M + G + N LI CK G I +L+ M N +
Sbjct: 482 KGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 541
Query: 239 ---LRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y + L DE LL V+ SP I + + I LS
Sbjct: 542 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI--------IYSSIASALS--- 590
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++ + + + I D +I+ D+ + + +I C + A+ Y V
Sbjct: 591 -------REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 643
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ Y LI L + E++ E+ G
Sbjct: 644 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 101/487 (20%), Positives = 181/487 (37%), Gaps = 70/487 (14%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR---GFNH 64
I + D A LL++LP + D + N VLK M K W +
Sbjct: 239 ICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC-MAKRWGCVQELMEEMVRMACPP 297
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ T+ T++ + V M E G D Y +++ + G ++ A I
Sbjct: 298 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 357
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M P +V Y +K L +R +E ++ EM + P + T+ +L+++ +
Sbjct: 358 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 417
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-----KENRLAL 239
G + +E+ +M E G PD +I CK G +++L+ M K N ++
Sbjct: 418 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTIS- 476
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSP-EFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y + + L + + + + L+ Q+ Q P I+ N + F
Sbjct: 477 -YTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINF----------------- 518
Query: 299 ILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
L KK LV AI+ LL ++ D ST+I+ + D AL V +
Sbjct: 519 --LCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 575
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y ++ L + KV ++ + + + A+L
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNI----QDTTIRSDAVL--------------- 616
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
Y A+I G ++A++ M G P+ T+ +L+ GL
Sbjct: 617 --------------YNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASE 662
Query: 477 GRVSDAE 483
G V +A+
Sbjct: 663 GFVKEAQ 669
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 199/490 (40%), Gaps = 69/490 (14%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ K +ST S + + I D YT+ V+ + + + F+ +++ H
Sbjct: 77 LTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGH 136
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I ++F+ M +G + VTY ++++ L G+ A+
Sbjct: 137 QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M+ C P +V ++ + L + +V EA +++ EMI +G+ PN TY L+ L
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ +++ + ++M ++ + PD N +++ CK G
Sbjct: 257 KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEG---------------------- 294
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
VA+ +D + +H P ++ N ++ L+
Sbjct: 295 ---------MVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC-----------------LR 328
Query: 303 KKNLVAIDSLLSGIMDKSIQLD--SAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ VA+ + D + D + VIS T+I C + D A+ FE + +L
Sbjct: 329 NEVDVAVK-----VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 383
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y LI L + + EM G + L L R A +
Sbjct: 384 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 443
Query: 419 SLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ P+ Q YT ++ AG + A ++ + KG+ P++ T+N+++ G
Sbjct: 444 KAIEGSNWDPDIQ----IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 499
Query: 473 LEKLGRVSDA 482
L K G +++A
Sbjct: 500 LCKQGLLAEA 509
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 158/407 (38%), Gaps = 94/407 (23%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY---- 172
+D A++ + M K+ P+ V + + + + ++M G+PP+ Y
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 173 -------------------------------TYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
T+T L+ L GK EAL +F KM G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
QP+ LI CK G T I +LR M++ VF + DSL
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLI---------DSLC 221
Query: 262 --WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
QV F N E +T I + L+ L K + +L++ ++D
Sbjct: 222 KDRQVTEAF-------NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
I D ++T+++ C ++G ++A + V +D+ + R G+ + T+ +
Sbjct: 275 KIMPDVFTLNTVVDALC----KEG-MVAEAHDV-VDMMIHR-------GVEPNVVTYNAL 321
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP-AAKIFSLLPEDQKCTA---TYTALI 435
+ GH L R V A K+F + + C A +Y LI
Sbjct: 322 MD--------GHCL---------------RNEVDVAVKVFDTMVH-KDCVANVISYNTLI 357
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y S DKA+ +++ M R+ + P+ T+N L+ GL +GR+ DA
Sbjct: 358 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 404
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA F +SR + TY T++ R+ +F M +G D VTY
Sbjct: 366 VDKAMYLFEEMSRQE-LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYR 424
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ +L +D A+ + + ++ P I YT + + +++A D++ + +
Sbjct: 425 TLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN +TY +++ L + G EA ++FS+M + G P+ N++ + E
Sbjct: 485 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT 544
Query: 226 ILILRYM 232
I +L M
Sbjct: 545 IELLEEM 551
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 136/343 (39%), Gaps = 53/343 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM--HWLSNAGDVDGAVN 122
D FT T++D + ++ V ++M +G+ + VTY ++M H L N +VD AV
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN--EVDVAVK 336
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+++ M K+C ++SY + V +A +++EM ++ L PN TY L+ L
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
G+ ++A+ +F +M G PD L + CK NR
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK----------------NRH----- 435
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+A+ K + ++ W D D ++ TT ++G + +
Sbjct: 436 -LDKAMALLKAIEGSN---W------------DPD-IQIYTTILDG-----------MCR 467
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
L L S + K +Q + + +I C A F K +
Sbjct: 468 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 527
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
Y + ++ N + E++EEM G S+ V LL+ L
Sbjct: 528 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGML 570
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 77/171 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D TY T+ D + + + + + ++ + D YT+++ + AG+++
Sbjct: 413 ARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELE 472
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + K P + +Y + L + EA+ ++ EM + G PN TY ++
Sbjct: 473 DARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+R + +E+ +M G D + +L+ G +++ IL
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YTT+LD A + + +F + KG+ + TY ++H L G + A ++ EM
Sbjct: 458 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMN 517
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P +Y + N+ ++ +EM+ RG + T T+L+ L G +
Sbjct: 518 KNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQ 577
Query: 189 EALEIFSKM 197
+I K+
Sbjct: 578 SVKQILCKI 586
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 182/437 (41%), Gaps = 37/437 (8%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
++ GF D+ T+ +++ I + + M EKG +D TY S++ L
Sbjct: 289 LRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G++D AV I M ++C P V+Y + L + V+ AT++ + + +G+ P+
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T+ L++ L E A+E+F +M+E G PD+ +ILIE C + +++L+ M
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468
Query: 233 KENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
+ + A V+ + +V D D + Q+ E + + + T I G
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAED-IFDQM------EMLGVSRSSVTYNTLING 521
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC---DHRRRDGAL 345
L K K + L+ ++ + ++ D +T+++ C D +R
Sbjct: 522 -----------LCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKR----- 565
Query: 346 LAFEYSVKMDLN---LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A + M LN + Y LIG L K ++++ + G L +I
Sbjct: 566 -AADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVI 624
Query: 403 HRLGSARRPVPAAKIFSLLPE--DQKCTATYTALI-GVYFSAGSADKALKIYKTMCRKGI 459
L +R A ++F + E D TY + G+ G +A+ M KGI
Sbjct: 625 QALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGI 684
Query: 460 HPSLGTFNVLLAGLEKL 476
P +F L GL L
Sbjct: 685 LPEFPSFGFLAEGLCSL 701
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 8/223 (3%)
Query: 22 DLLKNLPIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
D ++ L + S T +N + K+ E A L + G D+FTYTTML F
Sbjct: 501 DQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIME--GLKPDKFTYTTMLKYFC 558
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ I + + M G D VTY +++ L AG VD A + +++K T
Sbjct: 559 QQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQ 618
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG-KYEEALEIFSK 196
+Y ++ L R KEA +++EM+++G PP+ TY ++ L G +EA++ +
Sbjct: 619 AYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVE 678
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTII-LILRYMKENRLA 238
M E G+ P+ + L E C T+I LI M++ R +
Sbjct: 679 MLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFS 721
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 175/468 (37%), Gaps = 34/468 (7%)
Query: 27 LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
LP + + +L+ P A F W S ++ + +L A SM
Sbjct: 53 LPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSML 112
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN-----IWEEMKLKECYPTIVSYTA 141
+ M I +D T+ + + + + +N + + +K P Y
Sbjct: 113 TLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVK---PDTRFYNV 169
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ +L +++K ++ +M+ +PP+ T+ +L+ L +A + A+ + M G
Sbjct: 170 ALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYG 229
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL---RYPVFKEALQTFKVADEND 258
++PD+ L++ + + + I M E+ L V L +E
Sbjct: 230 LRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEAL 289
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+++ F P+ ++ N V GL K+ L +D +L +
Sbjct: 290 RFIYE-EEGFCPDQVTFNALV--------------NGLCRTGHIKQGLEMMDFML----E 330
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
K +LD +++I C D A+ + V D Y LIG L K N
Sbjct: 331 KGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEA 390
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALI 435
E+ +T G V LI L A ++F + E + C TY+ LI
Sbjct: 391 ATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE-KGCDPDEFTYSILI 449
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
S +AL + K M G ++ +N L+ GL K RV DAE
Sbjct: 450 ESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
L+ +++VK D Y + +L+K N V + +M V +LI
Sbjct: 153 LMERDFAVKPDTRF----YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRA 208
Query: 405 LGSARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L A + PA + +P D+K T+T L+ + + AL+I + M G
Sbjct: 209 LCKAHQLRPAILMLEDMPNYGLRPDEK---TFTTLMQGFIEEADVEGALRIKELMVESGC 265
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
+ + NVL+ GL K GR+ +A + E++ D ++ +A+
Sbjct: 266 ELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNAL 308
>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 938
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 176/444 (39%), Gaps = 53/444 (11%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +A +SS +++ M EK + + VTY+S+++ G ++ AV++ +M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKM 425
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ + P +Y + LF + + A+++ KEM G+ N Y L+ +L R G+
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
+E + M GV D LI+ K G+ + M+E + + Y V
Sbjct: 486 KEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVL 545
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV--EFVTTDIEG-------------- 288
L F + + P+ + N + + D EG
Sbjct: 546 ISGLLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIK 605
Query: 289 -PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
L I +V +L +K + +L +M I + ++++ H+R D
Sbjct: 606 PSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKT 665
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
E + + L R Y LI L KL K A ++E+M
Sbjct: 666 HETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDM--------------------E 705
Query: 408 ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
AR VP T T+ AL+ YF KAL Y M GI P++ T+N
Sbjct: 706 ARGFVPD-------------TVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYN 752
Query: 468 VLLAGLEKLGRVSDAEIYRKEKKS 491
++ GL G + + E + E KS
Sbjct: 753 TIIRGLSDAGLIKEVEKWLSEMKS 776
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 217/501 (43%), Gaps = 77/501 (15%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNH 64
++ + K A LL+N I D+ T N V+ H ++A+ F + + + G
Sbjct: 136 IHSLCKVGQLSFAISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKI-GILP 194
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++ T++D F + + K + + + E ++ +T+T ++ N ++ A +
Sbjct: 195 DTVSFNTLIDGFCKVGNFARAKALVDEISE----LNLITHTILISSYYNLHAIEEA---Y 247
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M + P +V++++ + L + +V E + +EM + G+ PN TYT L++ L +A
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKA 307
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
Y AL ++S+M G+ D +L+ KAG+ R
Sbjct: 308 KDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLR--------------------- 346
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
EA +TFK+ E++ + P ++ V+ + G LS + ++ +L+K
Sbjct: 347 -EAEKTFKMLLEDNEV---------PNVVTYTALVDGLCK--AGDLSSAEFIITQMLEKS 394
Query: 305 ---NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
N+V S+++G + K + L+ AV + + D ++ ++
Sbjct: 395 VFPNVVTYSSMINGYVKKGM-LEEAV-------SLMRKMEDQNVVPNGFT---------- 436
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +I L K E+ EM+K +GV ++ L + + + K L
Sbjct: 437 -YGTVIDGLFKAGK----QEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGL 491
Query: 422 PEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+D YT+LI V+F G + AL + M K + + ++NVL++GL K
Sbjct: 492 VKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLK 551
Query: 476 LGRVSDAEIYRK-EKKSIQAD 495
G+V Y+ +K I+ D
Sbjct: 552 FGKVGADWAYKGMREKGIEPD 572
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 176/417 (42%), Gaps = 27/417 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF+ D T++++++ + ++ + M+E G+ + VTYT+++ L A D A
Sbjct: 254 GFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHA 313
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +M ++ +V YT M LF ++EA +K +++ PN TYT L++
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDG 373
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +AG A I ++M E V P+ + +I K G + ++R M++ +
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVV-- 431
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
P F D L + + E + E +E I LV L
Sbjct: 432 -P------NGFTYGTVIDGLFKAGKQEVASEM-----SKEMRLIGVEENNYILDALVNHL 479
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+ + + L+ ++ K + LD +++I+V + AL E + ++ +
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDV 539
Query: 361 TAYLALIGILIKLNTFPKVAE--IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+Y LI L+K F KV + M + G + ++++ S R+ I
Sbjct: 540 VSYNVLISGLLK---FGKVGADWAYKGMREKGIEPDIATFNIMMN---SQRKQGDFEGIL 593
Query: 419 SLLPEDQKCTATYTALI-----GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
L + + C + +I G+ G +A+ I M IHP+L T+ + L
Sbjct: 594 KLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFL 650
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RGF D T+ ++ + + + +M E GI+ + TY +++ LS+AG +
Sbjct: 706 ARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIK 765
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
EMK + P +Y A + KE+ +Y EMI GL P TY VL+
Sbjct: 766 EVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLI 825
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ GK +A E+ +M + V P+ + +I CK
Sbjct: 826 SEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCK 865
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 142/349 (40%), Gaps = 20/349 (5%)
Query: 151 RVKEATDVYKEMIQRGLPPN-CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
R+ A M G+ P+ C +++ ++ V +++ ++SKM GV PD A
Sbjct: 73 RLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFAL 132
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ-VHPQF 268
N+LI CK G+ I +LR + + Y L +ADE L + V
Sbjct: 133 NVLIHSLCKVGQLSFAISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGI 192
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLV------------LILLKKKNLVAIDSLLSGI 316
P+ +S N ++ G + + LV +++ NL AI+ +
Sbjct: 193 LPDTVSFNTLIDGFCK--VGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDM 250
Query: 317 MDKSIQLDSAVISTIIEVNC-DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ D S+II C D + +G LL E +M + Y L+ L K
Sbjct: 251 VMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREME-EMGVYPNHVTYTTLVDSLFKAKD 309
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTA 433
+ + +M G + + + +L+ L A A K F +L ED + TYTA
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTA 369
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
L+ AG A I M K + P++ T++ ++ G K G + +A
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEA 418
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY LD+ + KR ++ E + GI + Y +++ L G A + E+M
Sbjct: 645 TYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDM 704
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ + P V++ A M F+ V +A Y M++ G+ PN TY ++ L AG
Sbjct: 705 EARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLI 764
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+E + S+M+ G++PD N LI K G + + I M + L + +
Sbjct: 765 KEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVL 824
Query: 248 LQTF 251
+ F
Sbjct: 825 ISEF 828
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 15/214 (7%)
Query: 40 LKTHPPMEKAWLFFNWVSR---------------SRGFNHDRFTYTTMLDIFGEAKRISS 84
++ HP + +F + S+ S G R Y T++ +
Sbjct: 637 MEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRK 696
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
V E M+ +G D VT+ ++MH V A++ + M P + +Y ++
Sbjct: 697 AAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIR 756
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L +KE EM RG+ P+ +TY L+ + G +E++ I+ +M G+ P
Sbjct: 757 GLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVP 816
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ N+LI + K G+ +++ M + R++
Sbjct: 817 KTSTYNVLISEFAKVGKMLQATELMKEMGKRRVS 850
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + TY T++ +A I ++ M+ +G+ D TY +++ + G+ +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKES 802
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I+ EM P +Y + ++ +AT++ KEM +R + PN TY ++
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISG 862
Query: 181 LVRAGKYEE 189
L + + E
Sbjct: 863 LCKLCTHPE 871
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 176/432 (40%), Gaps = 23/432 (5%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+D + + + + +FE M+ +G+ D VTY S++ G +D V +EE
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P +++Y A + ++ + Y+EM GL PN +Y+ L++ + G
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPV 243
++A++ + M+ G+ P++ LI+ CK G + M + + + Y
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ L + E + L ++ T + L+ L+ +K
Sbjct: 443 LIDGLCDAERMKEAEELFGKMD-----------------TAGVIPNLASYNALIHGFVKA 485
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
KN+ LL+ + + I+ D + T I C + + A + + + Y
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
L+ K + +++EM + + V +LI L + A F+ +
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 424 D---QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
D Q A +TA+I + A +++ M +KG+ P + L+ G K G V
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 481 DAEIYRKEKKSI 492
+A R + I
Sbjct: 666 EALALRDKMAEI 677
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 160/395 (40%), Gaps = 61/395 (15%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG D TY +M+D FG+ R+ FE M++ D +TY ++++ G +
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKL 348
Query: 118 DGAVNIWEEMKLKECYPTIVSYTA--------------------------------YMKI 145
+ + EMK P +VSY+ Y +
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 146 LFLNDRVKEATDVYK---EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ N ++ +D ++ EM+Q G+ N TYT L++ L A + +EA E+F KM AGV
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVF------KEALQTFKV 253
P+ A+ N LI KA + +L +K + L Y F E ++ KV
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 254 --------ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL----- 300
+ +SL++ F S N D L I+ +V
Sbjct: 529 VMNEMKECGIKANSLIYTT--LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 301 LKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L K LV A+D D +Q ++A+ + +I+ C + + A FE V+ L
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
+RTAY +L+ K + + ++M + G L
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKL 681
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 162/391 (41%), Gaps = 32/391 (8%)
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++H + G D +++M PT+ +Y + + V+ A +++EM
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
RGL P+ TY +++ + G+ ++ + F +M++ +PD N LI CK G+
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
+ R MK N L + + F + ++ Q + +F D V V
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFC----KEGMMQQ-----AIKFYVDMRRVGLVPN 401
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ ID K NL L + ++ ++ + + +I+ CD R A
Sbjct: 402 EYTYTSLIDAN-----CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 345 LLAFEYSVKMDL-----NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
F KMD NL +Y ALI +K + E++ E+ G + L
Sbjct: 457 EELFG---KMDTAGVIPNL--ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALKIYKTM 454
I L S + + AAK+ ++ E ++C + YT L+ YF +G+ + L + M
Sbjct: 512 TFIWGLCSLEK-IEAAKV--VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
I ++ TF VL+ GL K VS A Y
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 181/481 (37%), Gaps = 78/481 (16%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
LK P + A+ FF W GF H +Y + I A+ V + M +
Sbjct: 118 LKEDPKL--AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADC 175
Query: 100 DAV---------------TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
D + ++ L + G ++ A+ + +MK +P S +
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+ + +K+MI G P +TY ++++ + + G E A +F +M+ G+ P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV 264
D N +I+ K G + MK+ + E D + +
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKD------------------MCCEPDVITYNA 337
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+F +EF +++G GL K N+V+ +L+ + +
Sbjct: 338 LINCFCKFGKLPIGLEFY-REMKG-----NGL------KPNVVSYSTLVDAFCKEGM--- 382
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+ I+ D RR L+ EY+ Y +LI K+ +
Sbjct: 383 ---MQQAIKFYVDMRRV--GLVPNEYT-----------YTSLIDANCKIGNLSDAFRLGN 426
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVY 438
EM + G V LI L A R A ++F ++P A+Y ALI +
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN----LASYNALIHGF 482
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK--SIQADA 496
A + D+AL++ + +GI P L + + GL L ++ A++ E K I+A++
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 497 L 497
L
Sbjct: 543 L 543
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 68 TYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+ ++D + K +S ++ Y + + G+ +A +T+++ L V+ A ++E+
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 638
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K P +YT+ M F V EA + +M + G+ + YT L+ L +
Sbjct: 639 MVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++A +M G+ PD+ C +++K + G + + Y+ +++L
Sbjct: 699 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA +FN +S G + +T M+D + ++ + +FE M +KG+ D YT
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+M G+V A+ + ++M +++YT+ + L +++++A +EMI
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
G+ P+ +++ G +EA+E+ S
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVELQS 742
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 144/341 (42%), Gaps = 24/341 (7%)
Query: 54 NWVS--RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
NW + RG D TYT +++ A + + V + M++KG+++DAVTYT ++
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G + A + +M K P +V+YTA L V A ++ EM +GL N
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
+TY L+ L +AG E+A+ M EAG++PD +I C++ E +L+
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555
Query: 232 MKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
M + + + + F +V L W + P + N
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN----------- 604
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
L+ +KN+ + + G++ + + + + +I+ +C R AL
Sbjct: 605 -------SLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYF 657
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
++ L ++Y ALI +L K F + + E+M K
Sbjct: 658 HSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 191/471 (40%), Gaps = 33/471 (7%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
L+ I + N VL P E LF + + +Y +L A RI
Sbjct: 217 LRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEK------NTCSYNILLKALCTAGRIK 270
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+F+ M D VTY ++H +++ A+ + EM + V+YT+ +
Sbjct: 271 DAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+L +V +A V ++M+ G+ + +T +M R G A F +MQ+ G+
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLA 387
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSL 260
D LI C+AGE + +L+ M++ L A+ Y V + KV
Sbjct: 388 ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY--CKVG------ 439
Query: 261 LWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ + F+ N V+ VT ++ ++ GL K+ ++ A + LL + K
Sbjct: 440 ------KMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC----KQGDVCAANELLHEMCSK 489
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
++L+ +++I C + A+ + L + Y +IG L + +
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGV 437
+++EM G + +L++ + R ++ + E T TY +L+
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
Y + +IYK M + + P+ T+N+L+ G K + +A + E
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +TYTT++ ++K + + + M +KGI VTY +M+ +G V+G
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ E M K +P +Y + MK + +K T++YK M+ + + PN TY +L++
Sbjct: 585 KRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+A +EAL S+M E G + ++ N LI K + + M++ RL
Sbjct: 645 HCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAE 704
Query: 241 YPVF 244
V+
Sbjct: 705 PDVY 708
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 182/442 (41%), Gaps = 26/442 (5%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FT+ +L + ++ + + M+E G D Y +++ S A D A
Sbjct: 9 DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 68
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM C PT+V+YT + L R K+A + EM +G PN YTY V++E L
Sbjct: 69 AEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEE 128
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
K +EA ++ +M G PD N I+ CK L M + Y
Sbjct: 129 RKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTV 188
Query: 245 KEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK- 302
L D +L Q+ + +P+ ++ + ++ G + GL+ +LK
Sbjct: 189 INGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKG--GEVERAMGLLDSMLKL 246
Query: 303 --KKNLVAIDSLLSGIM---------DKSIQL-------DSAVISTIIEVNCDHRRRDGA 344
+ N+VA +SLL + D +++ D + I+ C R A
Sbjct: 247 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKA 306
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F+ V+ ++Y L+ L K +VE+ + + + L +L+
Sbjct: 307 KAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDG 366
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L R A +FS + +++ C Y ++ + DKAL+I+K M +
Sbjct: 367 LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-C 425
Query: 462 SLGTFNVLLAGLEKLGRVSDAE 483
++ T+N+L+ GL R+SDAE
Sbjct: 426 NVVTWNILVHGLCVDDRLSDAE 447
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 197/481 (40%), Gaps = 64/481 (13%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKWD--SYT--VNQVLKTHPPMEKAWLFFNWVSRSRG 61
S + + K D A+ L +P+ D SYT +N + K+ ++ A + ++ +RG
Sbjct: 155 SFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGD-LDSASRMLDQMT-NRG 212
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D TY++++D F + + + + M + G + V Y S++ L G + A
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 272
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
++ EM+ + P +VSY A + L +RVK+A V+ M++RG PN +Y++L+E L
Sbjct: 273 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEEL 332
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ + ++A+ + + +E D +L++ CK G + + + ++
Sbjct: 333 CKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 392
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
F + Q+H Q + + + VT +I LV L
Sbjct: 393 VFFYNVMLDSHCKRRQIDKALQIHKQ-----MLERNCCNVVTWNI---------LVHGLC 438
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
L +++L ++D+ D T+++ C + AL FE +VK +
Sbjct: 439 VDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 498
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y ALI L+ N + EE YL +F+ L
Sbjct: 499 TYSALITGLVHEN-------MAEE---------AYL-------------------LFTKL 523
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG----LEKLG 477
A + A+I Y GS D LK++ + + P+ TF ++G E LG
Sbjct: 524 D-----VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLG 578
Query: 478 R 478
+
Sbjct: 579 K 579
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 153/381 (40%), Gaps = 65/381 (17%)
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-------- 213
MI + P+ +T+ +L+ L R+ + E+A ++ +M+E G PD A N LI
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 214 ---------------------------EKCCKAGETRTIILILRYMKENRLA---LRYPV 243
+ CKAG T+ + +L M++ + Y V
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 244 FKEALQTFKVADENDSLLWQVHPQ-FSPEFISDN-------------DAVEF-----VTT 284
E L + DE +L ++ + + P+ ++ N +A +F VT
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
D+ ++ GL K +L + +L + ++ D S++I+ C + A
Sbjct: 181 DVVSYTTVINGLC----KSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
+ + +K+ AY +L+G L +L K +++ EM + G + V I
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296
Query: 405 LGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L A R A +F + E + CT ++Y+ L+ D A+ + + K
Sbjct: 297 LCKAERVKKAKAVFDRMVE-RGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIV 355
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
+ + VLL GL K GR +A
Sbjct: 356 DILLYTVLLDGLCKGGRFDEA 376
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 29/183 (15%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R+S + + M ++G D VTY +++ + G A+ ++EE C P +V+Y+
Sbjct: 442 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501
Query: 141 AYMKILFLNDRVKEA----------------------------TDVYKEMIQRGLPPNCY 172
A + L + +EA ++ E+I+ + PN
Sbjct: 502 ALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNAR 561
Query: 173 TY-TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
T+ + LV+A +A +F + + G PD N LI+ K G+ I
Sbjct: 562 TFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYS 621
Query: 232 MKE 234
MK+
Sbjct: 622 MKQ 624
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Query: 29 IKWDSYTVNQVLKTHPPMEK---AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+K D Y+ + + + +EK A F+ +S RG + TY T++ +A R
Sbjct: 176 LKPDVYSYSIFINGYCKVEKIDEAMELFDEMSH-RGVVPNAVTYNTLIKALCQALRPRDA 234
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ +F M G++ D + Y++++ G++D + +++EM+ + P +V YT +
Sbjct: 235 QVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIING 294
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ + +VK+A +V +I GL P+ +TYT L++ L R G EAL +F KM+E G P
Sbjct: 295 MCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPG 354
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKE 234
+ N+L++ C + +T T++ ++ M +
Sbjct: 355 SCSYNVLLQGCLQHNDTSTVVQLIHEMAD 383
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 115/235 (48%), Gaps = 8/235 (3%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGF 62
+S+V ++ KY T S ++ IK++ T++ ++ + F+ ++ RGF
Sbjct: 47 LSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGF 106
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN---IDAVTYTSVMHWLSNAGDVDG 119
D +TT++D RI + L++E G+ D VT S+M + G +D
Sbjct: 107 KPDVVIFTTLID---GVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDK 163
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
I+ M K P + SY+ ++ +++ EA +++ EM RG+ PN TY L++
Sbjct: 164 VRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIK 223
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L +A + +A +F KM G+ PD A + L++ CK G ++++ + M+
Sbjct: 224 ALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQR 278
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 80/159 (50%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T +++ + +I ++ +F LM KG+ D +Y+ ++ +D A+ ++
Sbjct: 144 DVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELF 203
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM + P V+Y +K L R ++A ++++M GL P+ Y+ L++ +
Sbjct: 204 DEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQ 263
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G +E L +F +MQ V+PD I+I C++ + +
Sbjct: 264 GNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVK 302
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 154/397 (38%), Gaps = 22/397 (5%)
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G++D A+ + M + P I+ + + + + + ++KEM RG+ N T
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++L+ + +F K + G +PD LI+ C+ G+T +L+ M
Sbjct: 79 SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
++ + + D + H S D + ID+
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ L + + + ++ +T+I+ C R A + F
Sbjct: 199 AM--------------ELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCAC 244
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L+ + AY L+ K ++ + +EM + + + ++I+ + +R+ A
Sbjct: 245 GLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDA 304
Query: 415 AKIFS-LLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++ S L+ E K TYTAL+ GS +AL++++ M G P ++NVLL G
Sbjct: 305 KEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQG 364
Query: 473 LEKLGRVSDAE--IYRKEKKSIQADALS----KDAVP 503
+ S I+ + ADA++ KD +P
Sbjct: 365 CLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKDFLP 401
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++ + F + R R D YT +++ ++++ K V + +G+ D TYT
Sbjct: 266 LDEMLVLFQEMQR-RLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYT 324
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L G + A+ ++ +M+ C P SY ++ ++ + EM R
Sbjct: 325 ALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADR 384
Query: 166 GLPPNCYTYTVLMEYL 181
G + T T L ++L
Sbjct: 385 GFYADAVTRTFLKDFL 400
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 203/511 (39%), Gaps = 73/511 (14%)
Query: 8 VYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
+ K++ W + Q+ +++L ++D V VL E A FF WV R+ F HDR
Sbjct: 95 ICKMMANREWTTRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDR 154
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+ +++I G A +++ + + M KG+ D + ++ AG V AV I+++
Sbjct: 155 ETHFKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQK 214
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK ++ SY A K + R A + M+ G+ P +TY V++ + +
Sbjct: 215 MKELGVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLR 274
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
E A + M+ G+ PD N +I C R+ + +E
Sbjct: 275 LETAKRFYEDMKSRGISPDVVTYNTMINGYC----------------------RFKMMEE 312
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL----- 301
A Q F + +P IS TT I+G +S+ + + L
Sbjct: 313 AEQFFTEMKGKN---------IAPTVIS-------YTTMIKGYVSVSRADDALRLFEEMK 356
Query: 302 ---KKKNLVAIDSLLSGIMDKS-----------------IQLDSAVISTIIEVNCDHRRR 341
+K N + +LL G+ D D+++ ++ C H
Sbjct: 357 AAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDL 416
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT------KAGHSLGV 395
D A+ + +++ + E Y LI K + + +++E + + +L +
Sbjct: 417 DAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEM 476
Query: 396 YLGA--LLIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
A L+I L + + A F LL + + + LI + G+ D A ++ K
Sbjct: 477 EASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLK 536
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
M R+G+ ++ +L+ G +DA+
Sbjct: 537 IMGRRGVSRDAESYKLLIKSYLSKGEPADAK 567
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 183/442 (41%), Gaps = 53/442 (11%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A +FN + + G R TY ML F + R+ + K +E M+ +GI+ D VTY +++
Sbjct: 243 AKRYFNAM-LNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMI 301
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ ++ A + EMK K PT++SYT +K R +A +++EM G
Sbjct: 302 NGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEK 361
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC-CKAGETRTIIL 227
PN TY+ L+ L A K EA +I ++M P + + + C CK G+ +
Sbjct: 362 PNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMH 421
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
+L+ M +R + EA + + EN
Sbjct: 422 VLKAM------IRLSIPTEAGH-YGILIENCCKAGMY----------------------- 451
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
DQ + L+ +NLV + +L +++++++ + II+ C+H + A
Sbjct: 452 -----DQAVKLL----ENLVEKEIILRP--QSTLEMEASAYNLIIQYLCNHGQTGKADTF 500
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F +K + E A+ LI K E+++ M + G S LLI S
Sbjct: 501 FRQLLKKGIQDE-VAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLS 559
Query: 408 ARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
P A + E+ +A + +++ F+ G A ++ +M KGI +L
Sbjct: 560 KGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDL 619
Query: 466 FNVLLAGL-------EKLGRVS 480
+L L E LGR++
Sbjct: 620 VAKILEALFMRGHDEEALGRIN 641
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 88/237 (37%), Gaps = 36/237 (15%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNW--VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D N +++ H L F + RG + D +Y ++ + + K
Sbjct: 511 DEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTAL 570
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
+ M E G + D+ + SVM L G V A + M K + ++ LF+
Sbjct: 571 DSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMR 630
Query: 150 DRVKEA-----------------------------TDVYKEMIQRGLPPNC----YTYTV 176
+EA T +K ++ GL C +Y
Sbjct: 631 GHDEEALGRINLLMNCNCPPDFNSLLSVLCEKGKTTSAFK-LLDFGLERECNIEFSSYEK 689
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+++ L+ AGK A I K+ E G D ++C+ LI+ + G T+ ++ R +K
Sbjct: 690 VLDALLGAGKTLNAYAILCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQADILSRMIK 746
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 176/432 (40%), Gaps = 26/432 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N D FTYTT+L F A + S VF M+ G + T+ +++ N G
Sbjct: 204 GINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEM 263
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++EE+K C P IV++ + + N E + V+KEM + G P TY L+
Sbjct: 264 MKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISA 323
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
R G +++A++I+ +M EAG+ PD + N ++ + G I MK+ R
Sbjct: 324 YSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPN 383
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ L + E +L A E + IE + + LVL+
Sbjct: 384 ELTYCSLLHAYANGKEIGRMLAL--------------AEEICSGVIEPHAVLLKTLVLVN 429
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD-----GALLAFEYSVKMD 355
K LV + + K D + ++ ++ + + RR +L F
Sbjct: 430 SKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSI---YGRRQMFTKTNEILNFMNESGFT 486
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+L Y +L+ + + F + E+++E+ G +I R A+
Sbjct: 487 PSL--ATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEAS 544
Query: 416 KIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+IFS + E TY + Y + + A+ + + M + G P+ T+N ++ G
Sbjct: 545 RIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGY 604
Query: 474 EKLGRVSDAEIY 485
K DA ++
Sbjct: 605 CKHNHRDDAIMF 616
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 186/447 (41%), Gaps = 61/447 (13%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + G+ ++S + + + G +D YTS++ + G AV ++++M+ +
Sbjct: 4 IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 132 CYPTIVSY----TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C PT+++Y Y K+ +++K +++ M G+ P+ YTY L+ R +
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKIK---GLFEGMKNAGVLPDEYTYNTLITCCRRGSLH 120
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EEA +F M+ G PDK N L++ K+ T+ + +LR M+ N + +
Sbjct: 121 EEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSL 180
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ + D LL +A+E +EG +++D +
Sbjct: 181 ISAYA----RDGLL--------------KEAMELKNQMVEGGINLD------------VF 210
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+LLSG + D + + E+ + + + F +KM N R + ++
Sbjct: 211 TYTTLLSGFVRAG--KDESAMRVFAEMRAAGCKPN--ICTFNALIKMHGN--RGKFAEMM 264
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
+ ++ V +IV T L V+ + + + + A +PE
Sbjct: 265 KVFEEIKNSCCVPDIVTWNTL----LAVFGQNGMDSEVSGVFKEMKRA---GFVPERD-- 315
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
TY LI Y GS D+A+ IYK M GI P L T+N +LA L + G +E
Sbjct: 316 --TYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFA 373
Query: 488 EKKSIQADALSKDAVPMEEKICDLLYG 514
E K D K P E C LL+
Sbjct: 374 EMK----DGRCK---PNELTYCSLLHA 393
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 7/185 (3%)
Query: 35 TVNQVLKTHPPMEKAW-----LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
T N +L + M W LF ++ G D +TY T++ VF
Sbjct: 70 TYNVILNVYGKMGMPWNKIKGLFEGM--KNAGVLPDEYTYNTLITCCRRGSLHEEAAAVF 127
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
+ M+ G D VTY +++ + A+ + EM++ C P+IV+Y + + +
Sbjct: 128 KDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARD 187
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+KEA ++ +M++ G+ + +TYT L+ VRAGK E A+ +F++M+ AG +P+
Sbjct: 188 GLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTF 247
Query: 210 NILIE 214
N LI+
Sbjct: 248 NALIK 252
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +GF+ D T ML I+G + + + M E G TY S+M+ S + +
Sbjct: 446 KRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENF 505
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + + +E+ K P +SY + N R+KEA+ ++ EM + GL P+ TY
Sbjct: 506 ERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTF 565
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ +E+A+++ M + G +P++ N +++ CK I+ + + E
Sbjct: 566 VASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHE 622
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 170/437 (38%), Gaps = 37/437 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG----D 116
GF D + YT+++ R VF+ M+E+G +TY +++ G
Sbjct: 28 GFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNK 87
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ G ++E MK P +Y + +EA V+K+M G P+ TY
Sbjct: 88 IKG---LFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNA 144
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ ++ + +EA+E+ +M+ G P N LI + G + + + M E
Sbjct: 145 LLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGG 204
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ L + L F A +++S + +V + N + G +
Sbjct: 205 INLDVFTYTTLLSGFVRAGKDESAM-RVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEM 263
Query: 297 VLILLKKKN------LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+ + + KN +V ++LL+ +DS V E+ +R G +
Sbjct: 264 MKVFEEIKNSCCVPDIVTWNTLLAVFGQNG--MDSEVSGVFKEM-----KRAGFV----- 311
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
ER Y LI + +F + +I + M +AG + + ++ L
Sbjct: 312 -------PERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGL 364
Query: 411 PVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
+ KIF+ + +D +C TY +L+ Y + + L + + +C I P
Sbjct: 365 WEQSEKIFAEM-KDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLK 423
Query: 468 VLLAGLEKLGRVSDAEI 484
L+ K + +AE+
Sbjct: 424 TLVLVNSKCDLLVEAEV 440
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 203/511 (39%), Gaps = 73/511 (14%)
Query: 8 VYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
+ K++ W + Q+ +++L ++D V VL E A FF WV R+ F HDR
Sbjct: 95 ICKMMANREWTTRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDR 154
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+ +++I G A +++ + + M KG+ D + ++ AG V AV I+++
Sbjct: 155 ETHFKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQK 214
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK ++ SY A K + R A + M+ G+ P +TY V++ + +
Sbjct: 215 MKELGVERSVKSYDALFKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLR 274
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
E A + M+ G+ PD N +I C R+ + +E
Sbjct: 275 LETAKRFYEDMKSRGISPDVVTYNTMINGYC----------------------RFKMMEE 312
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL----- 301
A Q F + +P IS TT I+G +S+ + + L
Sbjct: 313 AEQFFTEMKGKN---------IAPTVIS-------YTTMIKGYVSVSRADDALRLFEEMK 356
Query: 302 ---KKKNLVAIDSLLSGIMDKS-----------------IQLDSAVISTIIEVNCDHRRR 341
+K N + +LL G+ D D+++ ++ C H
Sbjct: 357 AAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDL 416
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT------KAGHSLGV 395
D A+ + +++ + E Y LI K + + +++E + + +L +
Sbjct: 417 DAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLLENLVEKEIILRPQSTLEM 476
Query: 396 YLGA--LLIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
A L+I L + + A F LL + + + LI + G+ D A ++ K
Sbjct: 477 EASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQDEVAFNNLIRGHAKEGNPDLAFEMLK 536
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
M R+G+ ++ +L+ G +DA+
Sbjct: 537 IMGRRGVSRDAESYKLLIKSYLSKGEPADAK 567
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 183/442 (41%), Gaps = 53/442 (11%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A +FN + + G R TY ML F + R+ + K +E M+ +GI+ D VTY +++
Sbjct: 243 AKRYFNAM-LNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMI 301
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ ++ A + EMK K PT++SYT +K R +A +++EM G
Sbjct: 302 NGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEMKAAGEK 361
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC-CKAGETRTIIL 227
PN TY+ L+ L A K EA +I ++M P + + + C CK G+ +
Sbjct: 362 PNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMH 421
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
+L+ M +R + EA + + EN
Sbjct: 422 VLKAM------IRLSIPTEAGH-YGILIENCCKAGMY----------------------- 451
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
DQ + L+ +NLV + +L +++++++ + II+ C+H + A
Sbjct: 452 -----DQAVKLL----ENLVEKEIILRP--QSTLEMEASAYNLIIQYLCNHGQTGKADTF 500
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F +K + E A+ LI K E+++ M + G S LLI S
Sbjct: 501 FRQLLKKGIQDE-VAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLS 559
Query: 408 ARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
P A + E+ +A + +++ F+ G A ++ +M KGI +L
Sbjct: 560 KGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDL 619
Query: 466 FNVLLAGL-------EKLGRVS 480
+L L E LGR++
Sbjct: 620 VAKILEALFMRGHDEEALGRIN 641
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 88/237 (37%), Gaps = 36/237 (15%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNW--VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D N +++ H L F + RG + D +Y ++ + + K
Sbjct: 511 DEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTAL 570
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
+ M E G + D+ + SVM L G V A + M K + ++ LF+
Sbjct: 571 DSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEALFMR 630
Query: 150 DRVKEA-----------------------------TDVYKEMIQRGLPPNC----YTYTV 176
+EA T +K ++ GL C +Y
Sbjct: 631 GHDEEALGRINLLMNCNCPPDFNSLLSVLCEKGKTTSAFK-LLDFGLERECNIEFSSYEK 689
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+++ L+ AGK A I K+ E G D ++C+ LI+ + G T+ ++ R +K
Sbjct: 690 VLDALLGAGKTLNAYAILCKIMEKGGAKDWSSCDDLIKSLNQEGNTKQADILSRMIK 746
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 200/499 (40%), Gaps = 73/499 (14%)
Query: 51 LFFNWVSRSRGFNH-----------------------------------DRFTYTTMLDI 75
LFF W GF H D FTY T++
Sbjct: 2 LFFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRG 61
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
F +A++I + M+ GI VT+ S++ L D A+ I+ +M + P
Sbjct: 62 FCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPD 121
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
YT + L +++ A ++ M+Q G P+ TYTVL+ L +A K+E+ +IF
Sbjct: 122 AFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFE 181
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-------------LRYP 242
+M G P+ ++ CKAG + ++R +K + ++
Sbjct: 182 EMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHD 241
Query: 243 VFKEALQTFKVA--DENDSLLWQVHPQFSPEFISD-------NDAVEFVTTDIE---GPL 290
EA + F++A D D +++ FIS ++A IE P
Sbjct: 242 RHDEARELFEMAAGDVQDVIVYT-------SFISGLCKAGKLDEAKAVHVKMIEAGCAPD 294
Query: 291 SIDQGLVLILLKKKNLVA-IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
+ +++ L K N V+ L+ M++ V + +++ C RR + A + E
Sbjct: 295 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 354
Query: 350 YSVKM-DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
++ D Y A+I L K + ++++M +AG V +I
Sbjct: 355 RMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKV 414
Query: 409 RRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
R A ++F + E + C Y LI Y A D+A+ + + M +GI P++ +
Sbjct: 415 GRLDEARELFQRMHE-RGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVS 473
Query: 466 FNVLLAGLEKLGRVSDAEI 484
+ ++ GL K RV +A +
Sbjct: 474 LSTIVDGLCKESRVEEARL 492
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAV-TYTSVMHWLSNAGDVDGAVNIWEEMK 128
T ++D +++R+ + E M E G +V TY++V+ L A +D A + ++M+
Sbjct: 334 TVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMR 393
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P +V+YTA + R+ EA ++++ M +RG + Y +L+ RA K +
Sbjct: 394 RAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVD 453
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
EA+ + +M G+QP+ + + +++ CK L++ M L PV
Sbjct: 454 EAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESLPDSDPV 508
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ ++D +A R+ V + M+ G D VTYT+++ G +D A +++ M
Sbjct: 368 TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM 427
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C +V+Y ++ +V EA + +EM RG+ PN + + +++ L + +
Sbjct: 428 HERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRV 487
Query: 188 EEALEIFSKMQ 198
EEA + KM
Sbjct: 488 EEARLLMEKMN 498
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A++ + R+ G D TYT ++D F + R+ + +F+ M E+G +D V Y
Sbjct: 382 LDDAYVVLQKMRRA-GCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYN 440
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ A VD A+ + EEM + P +VS + + L RV+EA + ++M
Sbjct: 441 ILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFE 500
Query: 166 GLP 168
LP
Sbjct: 501 SLP 503
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 125/350 (35%), Gaps = 22/350 (6%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G N YT L+E V G + EA +F +PD LI CKA +
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ +L MK + F ++ + D L H + D F+ T
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPD----AFLYTV 127
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
+ G L + K +L A S ++ D + ++ + +
Sbjct: 128 VIGHLC--------KINKLDLAA--SYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
FE + + E Y ++ K + ++ + G S L + LI L
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
R A ++F + D + YT+ I AG D+A ++ M G P +
Sbjct: 238 CKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVS 297
Query: 466 FNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGG 515
+NV++ L K RVS+A K + A+ + +P +C +L G
Sbjct: 298 YNVIIYSLCKDNRVSEA-------KELMDQAMERKCMP-GVPVCTVLVDG 339
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 186/461 (40%), Gaps = 58/461 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F W+ + Y M+ + ++ + +F MQE DA Y
Sbjct: 133 LEHAVYVFCWMKNQENYCARNDIYGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYN 192
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+++ + AG A+NI ++M P+ +Y + K+A ++ K+MI+
Sbjct: 193 SLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRN 252
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ T+ +++ +Y +A F M+ A + PD NI+I K G+
Sbjct: 253 GVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDA 312
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE--FVT 283
+ +L M+E R+ Q SP+ ++ + +V
Sbjct: 313 VDLLNSMREKRV-----------------------------QCSPDVVTYTSIIHSYYVC 343
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG----------------IMDKSIQLDSAV 327
+E ++ +V +K N+V+ ++LL + ++ D
Sbjct: 344 GQVENCKAVFDMMVAEGVKP-NIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVS 402
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T++ + + A F K + +Y ALI F + ++ EM
Sbjct: 403 YTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEME 462
Query: 388 KAGHSLGVYLGALLIHRLGSARRP------VPAAKIFSLLPEDQKCTATYTALIGVYFSA 441
K G V + L+ G R+ + AAK + + Y + IG Y S
Sbjct: 463 KDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGI----ELNIVAYNSGIGSYLSF 518
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G +KALK+Y TM ++P T+N+L++GL KLG+ +++
Sbjct: 519 GDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAES 559
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 169/433 (39%), Gaps = 35/433 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ +L F + + FE+M+ I D T V+H L G A
Sbjct: 253 GVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDA 312
Query: 121 VNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
V++ M+ K +C P +V+YT+ + ++ +V+ V+ M+ G+ PN +Y L+
Sbjct: 313 VDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALL 372
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G + EA IF +++ G++PD + L+ ++ + + M++N
Sbjct: 373 GAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCK 432
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y +A + + E SLL ++ P D V T
Sbjct: 433 PNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPP-----DVVSIST------------ 475
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ + + ID++L + I+L+ ++ I + AL + + +
Sbjct: 476 LLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASN 535
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI------HRLGSAR 409
+N + Y LI L KL + + + E+M L + + LI +L A
Sbjct: 536 VNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAE 595
Query: 410 RPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
K P+ TYTA+I Y GS ++K M I P + L
Sbjct: 596 STFINMKASGCFPD----VLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSL 651
Query: 470 LAGLEK---LGRV 479
+ L K GRV
Sbjct: 652 MEALNKGNQYGRV 664
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/455 (19%), Positives = 180/455 (39%), Gaps = 64/455 (14%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + +Y +L + + +F+L+++ G+ D V+YT++++ + +
Sbjct: 358 AEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPE 417
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EM+ C P VSY A + KEA + EM + G+PP+ + + L+
Sbjct: 418 KAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLL 477
Query: 179 EYLVRA-----------------------------------GKYEEALEIFSKMQEAGVQ 203
R G YE+AL++++ M + V
Sbjct: 478 AACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVN 537
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDS 259
PD NILI CK G+ + M + R+ L V+ + ++ K+A+ +
Sbjct: 538 PDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAEST 597
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ P+ ++ ++ T D G + ++ L +
Sbjct: 598 FINMKASGCFPDVLTYTAMIQAYT---------DHG---------SWTSVWDLFKEMEGN 639
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+I D+ + S+++E + L ++ + L + AY +I L +
Sbjct: 640 AILPDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTA 699
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT----ATYTALI 435
+EI+E + + S+ V L++ LG + K+F + C+ +TY L+
Sbjct: 700 SEIIEHLDSSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKMVSS--CSTVGLSTYKVLL 757
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTF-NVL 469
+ G K +++ + M G+ P+L + NVL
Sbjct: 758 RNLLAVGKWRKYVEVLQWMEDAGVRPTLYMYQNVL 792
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 169/414 (40%), Gaps = 58/414 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++DI+G +++ M VF+ MQEK D VT+ S++ N G + N++ EM
Sbjct: 426 TYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREM 485
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + ++ ++ V + D+YK +++ GL P T+ LM L R G++
Sbjct: 486 KRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRW 545
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
++ ++ +M EAG+Q A LI +G+ + +Y+ E + + P+
Sbjct: 546 QQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQ---FFQLRKYIDELEKSAKQPLSGIL 602
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+TF +A + D E L+++Q
Sbjct: 603 CKTFVLAYCKCGM------------------------DNEAQLALNQ------------- 625
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ D D V + +I + + A+ E K L + Y L+
Sbjct: 626 --------LYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLM 677
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LL 421
+ + + K E++ EM +AG + + L++ R AA++F +
Sbjct: 678 SMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVR 737
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
P++ T+ L+G Y S G +AL + + M G P+ TF LL G +
Sbjct: 738 PDN----FTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNR 787
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 199/505 (39%), Gaps = 41/505 (8%)
Query: 10 KILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
K L+ W D K + + ++ VL H + A F + + ++ D + Y
Sbjct: 159 KALEVFEWIRKHDCFKLRGVA--TASILSVLGNHEQLPAALELFESLKQDESYSLDVYAY 216
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV-DGAVNIWEEMK 128
T+++ I A+R +FE MQ +G +AVTY ++ GD D ++++EMK
Sbjct: 217 TSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMK 276
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
E P +Y + N +EA +++EM + G PN TY L++ + G ++
Sbjct: 277 DLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHK 336
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA E+ +M+ AG+ P+ N LI +AG + + + L + +
Sbjct: 337 EASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLI 396
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI--DQGLVLILLKKKN- 305
F A+ + L + + + N + DI G + D V +++KN
Sbjct: 397 SAFNRAERYEKAL-ETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNC 455
Query: 306 ---LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD---------------GALLA 347
LV +SLL + +++ + V + +R G
Sbjct: 456 TPDLVTWNSLLKSFG------NCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGY 509
Query: 348 FEYSVKMDLNLERTA-------YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
+YSV + L RT + AL+ L + + + ++ +EM +AG L A
Sbjct: 510 VDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAG 569
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRK 457
LIH ++ + K L + K + + Y G ++A +
Sbjct: 570 LIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDN 629
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA 482
G P + FN +++ K G + A
Sbjct: 630 GHSPDIKVFNAMISMCAKRGWIERA 654
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/453 (20%), Positives = 180/453 (39%), Gaps = 67/453 (14%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE-LMQEKGINIDAVTYT 105
+KA F W+ + F ++L + G +++ + +FE L Q++ ++D YT
Sbjct: 158 KKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYT 217
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN----DRVKEATDVYKE 161
S++ LS A D + ++E M+ + V+Y + + DR++ +++E
Sbjct: 218 SLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQ---SLFQE 274
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M + P+ YTY ++ ++ +EAL +F +M+EAG P++ N L++ K G
Sbjct: 275 MKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGM 334
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+ +L M+ ++ + E + + A D +A
Sbjct: 335 HKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCD------------------EAAAL 376
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLV-----AIDSLLSGIMDKSIQLDSAVISTI-IEVN 335
+ + L D+ L+ N A+++ M K+ + V I I++
Sbjct: 377 KKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTE--MRKTNCTPNIVTYNILIDIY 434
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
+ D + F++ + + + + +L+ +V+ + EM +AG+ GV
Sbjct: 435 GRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGV 494
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
T+ LI Y G D ++ IYK +
Sbjct: 495 ---------------------------------DTFNILIECYGRCGYVDYSVDIYKGLL 521
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
R G+ P++ TF L+A L + GR E +E
Sbjct: 522 RTGLQPTVPTFAALMASLAREGRWQQCEKVSQE 554
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D + M+ + + I + E +++ + D VTY +M G A
Sbjct: 630 GHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKA 689
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P +++Y + + R+ +A V+ +M+ + P+ +T+ L+
Sbjct: 690 EEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGS 749
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
G Y+EAL + M E G QP + L++
Sbjct: 750 YSSLGLYKEALSVIEYMTEHGCQPTQITFKALLD 783
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 10/198 (5%)
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL-NTF 376
D+S LD +++I + RR D + FE + Y ++ + K +++
Sbjct: 206 DESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSW 265
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTAL 434
++ + +EM S Y +I A ++F + E C TY AL
Sbjct: 266 DRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 325
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
+ VY G +A ++ M GI P++ T+N L+A + G +A +K
Sbjct: 326 LDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK------- 378
Query: 495 DALSKDAVPMEEKICDLL 512
LSK P E C L+
Sbjct: 379 SLLSKGLCPDEFTYCTLI 396
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 207/483 (42%), Gaps = 39/483 (8%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ K +Y T S + + + I D YT+N ++ + + + F+ +++ H
Sbjct: 76 LTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGH 135
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I ++F+ M +G + VTY ++++ L G+ + A+
Sbjct: 136 QPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR 195
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M+ C P +V YT+ + L + +V EA +++ +M+ +G+ P+ +TYT L+ L
Sbjct: 196 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 255
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII--LILRYMKENRL 237
+++ + ++M + + PD + +++ CK G E ++ +I+R ++ N +
Sbjct: 256 NLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVV 315
Query: 238 ALRYPVFKEALQT-----FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ LQ+ KV D VH ++P IS N T I G
Sbjct: 316 TYNALMDGHCLQSEMDEAVKVFDT------MVHNGYAPNVISYN-------TLING---- 358
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
K + + L + K + ++ +T++ C R A+ F V
Sbjct: 359 -------YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMV 410
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ Y L+ L K + + +++ + + + + ++I + A
Sbjct: 411 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 470
Query: 413 PAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A IFS L + TYT +I G D+A K++ M G P T+N +
Sbjct: 471 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 530
Query: 471 AGL 473
GL
Sbjct: 531 QGL 533
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
++ + T N ++ H M++A F+ + + G+ + +Y T+++ + + +R+
Sbjct: 310 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN-GYAPNVISYNTLINGYCKIQRMDKA 368
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
Y+FE M +K + + VTY ++MH + G + A+ ++ EM P + +Y +
Sbjct: 369 TYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDY 427
Query: 146 LFLNDRVKEAT-----------------------------------DVYKEMIQRGLPPN 170
L + EA D++ + +GL PN
Sbjct: 428 LCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPN 487
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TYT+++ L R G +EA ++F +M G PD N + + + E I +L+
Sbjct: 488 VRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQ 547
Query: 231 YM 232
M
Sbjct: 548 EM 549
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/426 (19%), Positives = 158/426 (37%), Gaps = 50/426 (11%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D +T +++ F R+ V + + G D T+T+++ L G +
Sbjct: 97 SFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIG 156
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A++++++M + P +V+Y + L A + + M Q P+ YT ++
Sbjct: 157 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII 216
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L + + EA +FSKM G+ PD LI C E + + +L M +++
Sbjct: 217 DSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIM 276
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+F + D+L + + +D V+ +++
Sbjct: 277 PDVVIFSTVV---------DALCKE------GKITEAHDVVD---------------MMI 306
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
I + N+V ++L+ G +C D A+ F+ V
Sbjct: 307 IRGVEPNVVTYNALMDG-------------------HCLQSEMDEAVKVFDTMVHNGYAP 347
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+Y LI K+ K + EEM + L+H R A
Sbjct: 348 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFH 407
Query: 419 SLLPEDQ-KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
++ Q ATY L+ D+A+ + KT+ + P + + +++ G+ + G
Sbjct: 408 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 467
Query: 478 RVSDAE 483
+ A
Sbjct: 468 ELEAAR 473
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 145/383 (37%), Gaps = 56/383 (14%)
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
N +D A++ + M P+ V + + + + + +M G+PP+ Y
Sbjct: 46 NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVY 105
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T +L+ + A + +K+ + G QPD A LI C G+
Sbjct: 106 TLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK----------- 154
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+AL F D ++ + F P ++ T I G
Sbjct: 155 -----------IGDALHLF------DKMIGE---GFQPNVVT-------YGTLING---- 183
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L K N A LL + + Q D V ++II+ C R+ A F V
Sbjct: 184 -------LCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 236
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++ + Y +LI L L + V ++ +M + V + + ++ L +
Sbjct: 237 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 296
Query: 413 PAAKIFSLL--PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A + ++ + TY AL+ + D+A+K++ TM G P++ ++N L+
Sbjct: 297 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356
Query: 471 AGLEKLGRVSDA-----EIYRKE 488
G K+ R+ A E+ +KE
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKE 379
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/478 (18%), Positives = 186/478 (38%), Gaps = 54/478 (11%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
+ N++L HPP + FN +L + K+ ++ + M
Sbjct: 56 SFNRMLHMHPP-----------PSTVDFNR-------LLTSIAKTKQYPTVFSLSNQMDS 97
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
GI D T +++ + + A ++ ++ P ++T ++ L + ++ +
Sbjct: 98 FGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGD 157
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A ++ +MI G PN TY L+ L + G A+ + M++ QPD +I+
Sbjct: 158 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 217
Query: 215 KCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSP 270
CK + + M ++ Y +L +LL Q ++ + P
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK---KNLVAIDSLLSGI-----MDKSIQ 322
+ + + V+ + EG ++ +V +++ + N+V ++L+ G MD++++
Sbjct: 278 DVVIFSTVVDALCK--EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVK 335
Query: 323 LDSAVI-----------STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+ ++ +T+I C +R D A FE + +L Y L+
Sbjct: 336 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-C 394
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL------PEDQ 425
+ + EM G + +L+ L A + + P+ Q
Sbjct: 395 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 454
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
YT +I AG + A I+ + KG+ P++ T+ +++ GL + G + +A
Sbjct: 455 ----IYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEAN 508
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +LD + + + + ++ ++ D YT V+ + AG+++ A +I+
Sbjct: 417 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 476
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ K P + +YT + L + EA ++ EM G P+ TY + + L++
Sbjct: 477 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 536
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ A+++ +M G D + +L+E C
Sbjct: 537 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/470 (20%), Positives = 205/470 (43%), Gaps = 28/470 (5%)
Query: 22 DLLKNLPIKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D +K I+ D YT N ++ + +A F+ + ++ GF D+ T+ ++LD++G+
Sbjct: 244 DSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEM-KAAGFEPDKVTFNSLLDVYGK 302
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A++ V + M+ G VTY S++ G ++ A+ + +EM+ + P +V+
Sbjct: 303 ARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVT 362
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YT + L ++ A Y EM++ G PN TY L++ GK+ E + +F ++
Sbjct: 363 YTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLR 422
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
AG PD N L+ + G + + + MK+ + + ++ D
Sbjct: 423 SAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 482
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+ +++ + + I +S ++ L + + L + ++D
Sbjct: 483 QAM-EIYKR-------------MIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVD 528
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFE--YSVKMDLNLERTAYLALIGILI--KLN 374
+ + D S+++ + ++ D E Y+ + +ER +L +L+ K+N
Sbjct: 529 RDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAER----IERHNWLVKTLVLVNNKVN 584
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYT 432
P+ + +E+ + SL + + ++ G + ++ SL+ E+ ATY
Sbjct: 585 NLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYN 644
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+L+ +Y G +K I + G+ P ++N ++ + G++ +A
Sbjct: 645 SLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEA 694
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 188/467 (40%), Gaps = 82/467 (17%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R +H R T + +F A ++ + E DA YT+++ S AG
Sbjct: 148 RALHHPR-VLPTAIRVFARAGCLAEASAILEAAPAP----DASAYTALVSAFSRAGRFRD 202
Query: 120 AVNIWEEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
AV +++ M P +V+Y AY K ++ KE + M + G+ + YTY
Sbjct: 203 AVAVFQRMVDGGVQPALVTYNVVFHAYSK---MSVPWKEVVALVDSMKEDGIERDRYTYN 259
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ R G + EA ++F +M+ AG +PDK N L++ KA + I +L+ M
Sbjct: 260 TLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRM--- 316
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD--IEGPLSID 293
EN +P ++ N + D +E L +
Sbjct: 317 --------------------ENAGC--------TPSVVTYNSLISAYVKDGLLEEALELK 348
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
Q + +K ++V +L+SG +D+ ++D+A L + V+
Sbjct: 349 QEMEFRGMKP-DVVTYTTLISG-LDRVGKIDAA------------------LATYSEMVR 388
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ Y ALI + F ++ + +++ AG+ V L+ G
Sbjct: 389 NGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSE 448
Query: 414 AAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
+ +F +PE TY +LI Y G D+A++IYK M GI+P + T+N
Sbjct: 449 VSGVFKEMKKAGYIPERD----TYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYN 504
Query: 468 VLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
+L+ L + GR AE + A+ + +D P E LL+
Sbjct: 505 AVLSALARGGRWEQAE-------KLFAEMVDRDCKPDELSYSSLLHA 544
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 4/185 (2%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
VN + P EKA+ R R + D M+ I+G+ K + ++ V LM E
Sbjct: 579 VNNKVNNLPETEKAFQEL----RRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMEN 634
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
IN A TY S+MH S GD + +I E+K P SY + ++KEA
Sbjct: 635 SINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEA 694
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ ++ EM G+ P+ TY + ++ V +EEA+++ + G +P++ N +++
Sbjct: 695 SRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQG 754
Query: 216 CCKAG 220
+ G
Sbjct: 755 YSRHG 759
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI---NIDAVTYTSVMHWLSNAGD 116
R D +Y+++L + AK++ MK + E + + I N T V + ++N +
Sbjct: 529 RDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPE 588
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A ++E++ + C I A + I N VK+ +V M++ + + TY
Sbjct: 589 TEKA---FQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNS 645
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
LM R G E+ I ++++ +G++PD+ + N +I + G+ + + MK
Sbjct: 646 LMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 702
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 187/437 (42%), Gaps = 49/437 (11%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y T+++ F ++ +F M ++GI + VTYT V+ L A VD A ++++M
Sbjct: 206 SYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQM 265
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P IV+YT + + KE + KEM GL P+C+TY +L++YL + GK
Sbjct: 266 IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKC 325
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA ++F M G++PD + I++ G + L M N ++ + +F
Sbjct: 326 TEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIV 385
Query: 248 LQTFK----VADENDSLLWQVHPQFSPEFISDNDAVEFVT-------TDIEGPLSIDQGL 296
F + + D SP ++ ++ + +++ I++G+
Sbjct: 386 FCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445
Query: 297 VLILLKKKNLVAIDSLLSGIM-----DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
N+V SL+ G+ +K+ +L +++ I N + F +
Sbjct: 446 A------PNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPN----------VVFFNT 489
Query: 352 VKMDLNLERTAYLA--LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ +L E A LI ++ ++ T P + I GH L+ + A
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDI--ISYNALIRGHC--------LVGKTDEAS 539
Query: 410 RPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
+ + L P + TY L+ Y G D A +++ M GI P + T+N +
Sbjct: 540 KLLDIMLSVGLKPNE----CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTI 595
Query: 470 LAGLEKLGRVSDA-EIY 485
L GL K R S+A E+Y
Sbjct: 596 LHGLFKTRRFSEAKELY 612
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 182/428 (42%), Gaps = 35/428 (8%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELM---QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+Y T+L F + R + +M Q + + V+Y +V++ G VD A N++
Sbjct: 168 SYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLF 227
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M + P +V+YT + L V A V+++MI +G+ PN TYT L+ +
Sbjct: 228 LDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSI 287
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII--LILRYMKENRLAL 239
G+++E + + +M G++PD +L++ CK G E R + +I + +K +
Sbjct: 288 GQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPD--VS 345
Query: 240 RYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y + T E S L V SP N +V
Sbjct: 346 IYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN-------------------IVF 386
Query: 299 ILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
KK ++ A+D + + + + + + +T+I+ C R D A L F + +
Sbjct: 387 CAFAKKAMIGEAMD-IFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ +L+ L ++ + K E+ EM G V ++ L + R + A +
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQR 505
Query: 417 IFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ L+ + +Y ALI + G D+A K+ M G+ P+ T+N LL G
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565
Query: 475 KLGRVSDA 482
+ GR+ DA
Sbjct: 566 RDGRIDDA 573
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 110/542 (20%), Positives = 215/542 (39%), Gaps = 68/542 (12%)
Query: 20 AQDLLKNLPIKWDSY-TVNQVLKTHPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFG 77
A +++ P SY TV T ++KA+ LF + + G + TYT ++D
Sbjct: 193 ADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQ--GIPPNVVTYTIVIDGLC 250
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+A+ + + VF+ M +KG+ + VTYT ++H + G V + +EM P
Sbjct: 251 KAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCF 310
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGL------------------------------ 167
+Y + L + EA ++ MI++G+
Sbjct: 311 TYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLM 370
Query: 168 -----PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
PN Y + ++ + EA++IF+KM++ G+ P+ LI+ CK G
Sbjct: 371 VGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRV 430
Query: 223 RTIILILRYMKENRLALRYPVFKE---ALQTFKVADENDSLLWQ-VHPQFSPEFISDNDA 278
L M +A VF L T ++ L ++ V+ P + N
Sbjct: 431 DDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTI 490
Query: 279 VEFVTTDIEGPLSIDQGLVLILLK---KKNLVAIDSLLSG----------------IMDK 319
+ + T EG + Q L+ ++ + + ++++ ++L+ G ++
Sbjct: 491 MCNLCT--EGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSV 548
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
++ + +T++ C R D A F+ + + Y ++ L K F +
Sbjct: 549 GLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEA 608
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPED-QKCTATYTALIGV 437
E+ M +G +Y ++++ L A K+F SL +D Q T+ +IG
Sbjct: 609 KELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGA 668
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS--DAEIYRKEKKSIQAD 495
G + A+ ++ T+ G+ P + T+ ++ L + G + D EK +
Sbjct: 669 LLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPN 728
Query: 496 AL 497
+L
Sbjct: 729 SL 730
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 149/372 (40%), Gaps = 29/372 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G + + + + + F + I +F M+++G++ + V Y +++ L G VD
Sbjct: 372 GNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVD 431
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +M + P IV +T+ + L D+ ++A +++ EM+ +G+ PN + +M
Sbjct: 432 DAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIM 491
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI------------- 225
L G+ +A + M+ G +PD + N LI C G+T
Sbjct: 492 CNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLK 551
Query: 226 -------ILILRYMKENRLALRYPVFKEALQ---TFKVADENDSLLWQVHPQFSPEFISD 275
L+ Y ++ R+ Y VF+E L T V N L H F S+
Sbjct: 552 PNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTIL----HGLFKTRRFSE 607
Query: 276 NDAVEFVTTDIEGPLSI-DQGLVLILLKKKNLV-AIDSLLSGIMDKSIQLDSAVISTIIE 333
+ SI ++L L K N V + + K +Q+D + +I
Sbjct: 608 AKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIG 667
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
R++ A+ F L + T Y + LI+ + + + EM K+G +
Sbjct: 668 ALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAP 727
Query: 394 GVYLGALLIHRL 405
+ L+ RL
Sbjct: 728 NSLMLNFLVRRL 739
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++ ++ +K + T N +L + ++ A+ F + S G TY T+L +
Sbjct: 543 DIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEM-LSNGITPVVVTYNTILHGLFK 601
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+R S K ++ M G TY +++ LS VD A+ +++ + K+ I++
Sbjct: 602 TRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIIT 661
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ + L + R ++A +++ + GL P+ TY ++ E L+ G EE +FS+M+
Sbjct: 662 FNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEME 721
Query: 199 EAGVQPDKAACNILIEK 215
++G P+ N L+ +
Sbjct: 722 KSGCAPNSLMLNFLVRR 738
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 96/472 (20%), Positives = 170/472 (36%), Gaps = 73/472 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNI 123
D FTY+ ++ F R+ F L+ + G D V ++ L +A V A+ +
Sbjct: 93 DVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGV 152
Query: 124 W-EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ---RGLPPNCYTYTVLME 179
M C P +VSY +K +R +EA ++ M R PPN +Y ++
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G+ ++A +F M + G+ P+ +
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQGIPPN--------------------------------VV 240
Query: 240 RYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ---- 294
Y + + L +V D + + Q + P ++ T I G LSI Q
Sbjct: 241 TYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVT-------YTCLIHGYLSIGQWKEV 293
Query: 295 -------------------GLVL-ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
GL+L L KK L ++ K I+ D ++ I+
Sbjct: 294 VRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHG 353
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
+ V ++ + + K + +I +M + G S
Sbjct: 354 YATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPN 413
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYK 452
V A LI L R A F+ + + +T+L+ + +KA +++
Sbjct: 414 VVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFF 473
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
M +GIHP++ FN ++ L GRV A+ I E+ + D +S +A+
Sbjct: 474 EMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNAL 525
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 85/196 (43%), Gaps = 5/196 (2%)
Query: 21 QDLLKN--LPIKWDSYTV-NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
Q++L N P+ T+ + + KT E L+ N ++ + ++ +TY +L+
Sbjct: 578 QEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWS--IYTYNIILNGLS 635
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ + +F+ + K + +D +T+ ++ L G + A+N++ + P +
Sbjct: 636 KNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVT 695
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + L ++E ++ EM + G PN L+ L+ G A SK+
Sbjct: 696 TYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKI 755
Query: 198 QEAGVQPDKAACNILI 213
E + + ++LI
Sbjct: 756 DEKNFSLEASTTSMLI 771
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ +LM +G D V+Y +++ L +G+VD A
Sbjct: 127 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 186
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + ++K K C P ++SY + L + KEA ++ EM+ +GL P+ TY+ +
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 246
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L R + E+A+ F K+Q+ G++P+ N +I CK ET + I + YM N
Sbjct: 247 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 301
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 23/293 (7%)
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+MK + E M++KG D VTY V++ + G VD A+ + + C P VSY +
Sbjct: 11 AMKLLDE-MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K L +R ++A ++ EM Q+G PPN T+ +L+ +L R G E ALE+ ++ + G
Sbjct: 70 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 129
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSL 260
P+ + N L+ CK + + L M + Y AL D L
Sbjct: 130 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 189
Query: 261 LWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
L Q+ + +P IS N ++ +T K A++ LL+ ++ K
Sbjct: 190 LHQLKDKGCAPVLISYNTVIDGLTK-----------------AGKTKEALE-LLNEMVSK 231
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+Q D STI C R + A+ AF M + Y A+I L K
Sbjct: 232 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 284
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 84/174 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + +Y +L A+R + + M +KG + VT+ ++ +L G V+
Sbjct: 55 SYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVE 114
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + E++ C P +SY + ++ +A M+ RG P+ +Y L+
Sbjct: 115 PALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLL 174
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L R+G+ + A+E+ ++++ G P + N +I+ KAG+T+ + +L M
Sbjct: 175 TALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 228
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D TY +++ + R+ + + G + V+Y V+ L A
Sbjct: 19 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 78
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + EM K C P +V++ + L V+ A +V +++ + G PN +Y L
Sbjct: 79 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 138
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + K ++A+ M G PD + N L+ C++GE + +L +K+
Sbjct: 139 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 198
Query: 238 A 238
A
Sbjct: 199 A 199
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 36/192 (18%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M+KA F + + SRG D +Y T+L + + + +++KG ++Y
Sbjct: 148 MDKAMAFLDLMV-SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 206
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT--------- 156
+V+ L+ AG A+ + EM K P I++Y+ L DR+++A
Sbjct: 207 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 266
Query: 157 --------------------------DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
D++ MI G PN TYT+L+E L G +EA
Sbjct: 267 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 326
Query: 191 LEIFSKMQEAGV 202
++ ++ GV
Sbjct: 327 RDLLDELCSRGV 338
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 124/308 (40%), Gaps = 64/308 (20%)
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---AL 239
R+G Y++A+++ +M++ G PD N+++ C+ G I L+ + +
Sbjct: 5 RSG-YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTV 63
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y + + L T + ++ + L+ ++ + P P + +++
Sbjct: 64 SYNIVLKGLCTAERWEDAEELMGEMGQKGCP------------------PNVVTFNMLIS 105
Query: 300 LLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L +K LV A++ +L I +S + ++ C ++ D A+ AF +DL
Sbjct: 106 FLCRKGLVEPALE-VLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM-AF-----LDLM 158
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ R Y P + +T S V + L+H+L
Sbjct: 159 VSRGCY-------------PDIVSYNTLLTALCRSGEVDVAVELLHQL------------ 193
Query: 418 FSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+D+ C +Y +I AG +AL++ M KG+ P + T++ + AGL
Sbjct: 194 -----KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 248
Query: 475 KLGRVSDA 482
+ R+ DA
Sbjct: 249 REDRIEDA 256
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
K+A + EM +G P+ TY V++ + + G+ ++A+E + G +P+ + NI+
Sbjct: 9 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 68
Query: 213 IEKCCKA 219
++ C A
Sbjct: 69 LKGLCTA 75
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 185/418 (44%), Gaps = 33/418 (7%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M++ G + VTY S++ L + D A ++E MK EC P++V+Y + LF +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
++ A +++EM+ R + ++ +L+ L RAGK E ALE F KM + P+ ++
Sbjct: 61 LERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118
Query: 212 LIEKCCKAGETRTIILILRYM--------------------KENRLALRYPVFKEALQTF 251
LI+ CKA + +L M KE+++A + V +E L
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 252 KVAD--ENDSLLWQVHPQFSPEFISDNDAV-EFVTTDIEGPLSIDQG-LVLILLKKKNLV 307
V + +SLL H +SD A+ +T P + G L+ L K +
Sbjct: 179 CVPNLVTYNSLL---HGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
++L+ ++DK D + + +I C + D ++ +V + + Y ++I
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L + N + ++ + G V L + LI L A + A ++ ++ D C
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGD-GC 354
Query: 428 TA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A TY+ LI AG D+A + M R G PS T+N L+ GL L + +A
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 412
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 190/492 (38%), Gaps = 62/492 (12%)
Query: 11 ILKYSTWDSAQDL---LKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNH 64
+ K + D AQ+L +K++ T N +L +E+A F + R +H
Sbjct: 20 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR--SH 77
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++ ++ A +I + F M ++ + + +TY+ ++ L A V AV +
Sbjct: 78 DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELL 136
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E MK + C P +++YT + L +V A +V +EM+ G PN TY L+ L RA
Sbjct: 137 ESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRA 196
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+ +AL + M G P+ LI+ CK G + +L M + ++
Sbjct: 197 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 256
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ AD+ D + + S D V + +D+ L+L K
Sbjct: 257 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 316
Query: 305 NLVAIDSLL----------SGIMDKSIQL-----------DSAVISTIIEVNCDHRRRDG 343
D +L +G +D++ L D ST+I+ C R D
Sbjct: 317 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDE 376
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A L V+M Y +LI L LN + E+VEEM ++ + +LIH
Sbjct: 377 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 436
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ R A AL ++ M G+ P
Sbjct: 437 GMCRMERVDSA--------------------------------ALDYFQEMIDNGVIPDH 464
Query: 464 GTFNVLLAGLEK 475
T+++LL GL+K
Sbjct: 465 ITYSILLEGLKK 476
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D TY+T++D +A R+ + M G +TY S++ L + +D A
Sbjct: 353 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 412
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT-DVYKEMIQRGLPPNCYTYTVLME 179
+ + EEM+ C P+ V+Y + + +RV A D ++EMI G+ P+ TY++L+E
Sbjct: 413 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLE 472
Query: 180 YLVRAGKYEE 189
L ++ E
Sbjct: 473 GLKKSKDLHE 482
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 207/465 (44%), Gaps = 43/465 (9%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D ++ N V++ +EKA N + S G + T+ ++D F +A ++
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGS-GCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+ M+ G+ D V YTS++ + G++D +++E+ + P ++Y ++
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
++KEA+++++ MI+RG+ PN YTYT L++ L GK +EAL++ + M E +P+
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVH 265
NI+I K CK G + I+ MK+ R + Y + L DE LL+ +
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 266 PQFS---PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK---------NLVAIDSLL 313
S P+ IS N + + + ++D + LL +K N++ +L
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALD---IYDLLVEKLGAGDRVTTNILLNSTLK 471
Query: 314 SGIMDKSIQL-----DSAVI--STIIEVNCDHRRRDGAL-LAFEYSVKM---DLNLERTA 362
+G ++K+++L DS ++ S D + G L +A KM +L
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGH-----SLGVYL-GALLIHRLGSARRPVPAAK 416
Y L+ L K + + + EEM + + S + + G+L + SA +
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L P+ TY+ LI + G D+A+ + M G P
Sbjct: 592 RAGLSPD----LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT M+D F + ++ K + M+ + Y ++ L G +D A ++EEM
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ +P +VS+ + +K A + M + GL P+ +TY+ L+ ++ G
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+EA+ F KM ++G +PD C+ +++ C GET + +++ + + + L
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 193/484 (39%), Gaps = 43/484 (8%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL- 91
+++ +L+ + M K F ++ RGF + + + +L G + + K V L
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK--GLCRNLECGKAVSLLR 166
Query: 92 -MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M+ + D +Y +V+ +++ A+ + EMK C ++V++ +
Sbjct: 167 EMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
++ EA KEM GL + YT L+ G+ + +F ++ E G P N
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVF---------------KEALQTFKVAD 255
LI CK G+ + I +M E +R V+ KEALQ +
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIER--GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 256 END----SLLWQ--VHPQFSPEFISDN-DAVEFVTTDIEGPLSIDQGLVL-ILLKKKNLV 307
E D ++ + ++ ++D + VE + P +I ++L L K +L
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 308 AIDSLLSGIMDKSIQLDSAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
LL ++ S D VIS +I C R AL ++ V+ +R
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 366 LIGILIKLNTFPKVAEIVEEM--TKAGHSLGVYL----GALLIHRLGSARRPVPAAKIFS 419
L+ +K K E+ +++ +K + Y G L A+ + ++
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L P Y L+ GS D+A ++++ M R P + +FN+++ G K G +
Sbjct: 525 LQPS----VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 480 SDAE 483
AE
Sbjct: 581 KSAE 584
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 157/403 (38%), Gaps = 64/403 (15%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF+ + G ++ A ++M L + + + A + + +M + + VS + ++
Sbjct: 60 VFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYV 118
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ A V M++RG N Y + +L++ L R + +A+ + +M+ + PD
Sbjct: 119 QMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVF 178
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+ N +I C+ E + + MK + + + + F A + D +
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMG----- 233
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
F+ + ++F+ GL + +LV SL+ G D
Sbjct: 234 ----FLKE---MKFM------------GL------EADLVVYTSLIRGFCD--------- 259
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER------TAYLALIGILIKLNTFPKVAE 381
C R AL D LER Y LI KL + +E
Sbjct: 260 --------CGELDRGKALF--------DEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE-DQKCTA-TYTALIGVYF 439
I E M + G VY LI L + A ++ +L+ E D++ A TY +I
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G A++I + M ++ P T+N+LL GL G + +A
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 162/393 (41%), Gaps = 53/393 (13%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E GI+ + +Y +++ L G V A + +M + P +VSY+ + +K
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+A + +M +GL PN YTY ++ L + GK EA ++ +M + PD LI
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
K G RT N+ F E L + SP++I
Sbjct: 371 HGFFKLGHVRT---------ANKW------FDEMLSK----------------KISPDYI 399
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ TT I+G QG ++ +L ++ + ++ D +T+I+
Sbjct: 400 T-------YTTLIQG---FGQG--------GKVIEPQNLFHEMISRGLKPDEVTYTTLID 441
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
V C A V+M + Y ALI L K E+++EM K G L
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501
Query: 394 GVYLGALLIH---RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
V + +++ + G+ + + K + D TYT +I Y G DKA K+
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD-AITYTTVIDAYCRLGDIDKAHKL 560
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ M +G+ P++ TFNVL+ G LG + D +
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 151/339 (44%), Gaps = 24/339 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+ + D TYTT++ FG+ ++ + +F M +G+ D VTYT+++ AG++
Sbjct: 391 SKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMV 450
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EM P IV+Y A + L + + A ++ EM ++GL N Y ++
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
+ +AG E+A+++ +M+ AG+ PD +I+ C+ G+ +L+ M + L
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Query: 238 --ALRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + V + ++ D LL W + P+ I+ N ++ Q
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK-------------Q 617
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ + ++ + + ++ + DS + +I+ +C R A ++ ++
Sbjct: 618 HCI-----RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
T+Y ALI K + E+ EEM GH L
Sbjct: 673 GYVPTVTSYNALIKRFYKKKKILEARELFEEM--RGHGL 709
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 2/186 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGE-AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G +R+TY +++ + + K + K + E+M +K I D V YT+++H G V
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP-DNVVYTTLIHGFFKLGHVR 380
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++EM K+ P ++YT ++ +V E +++ EMI RGL P+ TYT L+
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ +AG+ A + ++M + G+ P+ LI+ CK GE T +L M++ L
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Query: 239 LRYPVF 244
L ++
Sbjct: 501 LNVCIY 506
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 167/435 (38%), Gaps = 59/435 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R D +Y+T++D + + + + MQ KG+ + TY S++ L G
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + EM ++ P V YT + F V+ A + EM+ + + P+ TYT L++
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQ 406
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ GK E +F +M G++PD+ LI+ CKAG
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG------------------- 447
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
E + F + +E V +P ++ L+
Sbjct: 448 ------EMVNAFSLHNE------MVQMGMTPNIVTYG------------------ALIDG 477
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K L + LL + K +QL+ + ++++ C + A+ + ++ +
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL------GALLIHRLGSARRPVP 413
Y +I +L K ++++EM G V G ++ L R +
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++P+ TY L+ + S + KIYK M +G+ P T+N+L+ G
Sbjct: 598 WMLEKGIVPD----AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGH 653
Query: 474 EKLGRVSDAEIYRKE 488
K + +A KE
Sbjct: 654 CKARNLKEAWFLYKE 668
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G + Y +M++ +A I + + M+ GI+ DA+TYT+V+ GD+
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI 554
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + +EM + PT+V++ M + +++ + M+++G+ P+ TY L
Sbjct: 555 DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
M+ +I+ +M+ GV PD NILI+ CKA + + + M E
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG T+ +++ F + + M EKGI DA+TY ++M ++
Sbjct: 567 RGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNT 626
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
I++ M+ + P +Y +K +KEA +YKEMI++G P +Y L++
Sbjct: 627 TTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIK 686
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ K EA E+F +M+ G+ D N ++ C + G+
Sbjct: 687 RFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGD 728
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY T++ +++ +++ M+ +G+ D+ TY ++ A ++
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++EM K PT+ SY A +K + ++ EA ++++EM GL + Y ++
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
G E L + C+ IEKC
Sbjct: 722 MCYEEGDVEITLNL---------------CDEAIEKC 743
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 175/425 (41%), Gaps = 85/425 (20%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + + T ++ F A + + +L+ + G+ +A + +M L G++
Sbjct: 202 RGIRLEPTSCTGLMSRFPTAPEACA--FYLQLL-DAGLPPEAKLFNVLMRDLVRLGELAS 258
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N+++EM+ + T+VS+ + + + A +++ M + G+ P+ YTY L++
Sbjct: 259 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 318
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L R G+ E+A +F KM G++P+ ILI+ CK G+ T++ + R M+E
Sbjct: 319 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRER---- 374
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
V P DAV + +V
Sbjct: 375 -----------------------GVRP----------DAVTY------------NAIVNG 389
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + ++L + ++ + ++ D+ +T+I+ C D A+ + V + L+
Sbjct: 390 LCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLD 449
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y ALI L K ++ EM +AG
Sbjct: 450 EVTYTALISGLSKAGRSADAERVLGEMMEAG----------------------------- 480
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L P++ TYT +I + G L++ K M KG P + T+NV++ G KLG++
Sbjct: 481 LEPDN----TTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 536
Query: 480 SDAEI 484
+A++
Sbjct: 537 KNADM 541
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG + +T ++D + +M + M+E+G+ DAVTY ++++ L A D+
Sbjct: 338 GRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLK 397
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A I EM+ P V+YT + + + A ++ + M+ G+ + TYT L+
Sbjct: 398 SASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALI 457
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
L +AG+ +A + +M EAG++PD ++I+ C+ G+ +T + +L+ M+
Sbjct: 458 SGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ 512
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS G D TYTT++D + + + + + + M +G+ +D VTYT+++ LS AG
Sbjct: 407 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 466
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + EM P +YT + VK + KEM +G P TY V+
Sbjct: 467 ADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVI 526
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
M + G+ + A + + M GV PD NIL++ CK G+ I
Sbjct: 527 MNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDI 574
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG D TY +++ A+ + S + M+ G+ D VTYT+++ ++
Sbjct: 372 RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEEL 431
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I + M + V+YTA + L R +A V EM++ GL P+ TYT++
Sbjct: 432 DMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMV 491
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
++ R G + L + +MQ G +P N+++ CK G+ + ++L M
Sbjct: 492 IDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAM 546
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG ++ TM+ A + + + M E G+ D TY +++ L G +
Sbjct: 267 QSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRI 326
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++E+M + P V +T + + ++++EM +RG+ P+ TY +
Sbjct: 327 EDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAI 386
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ L RA + A I +M+ AG++PD LI+ CK E
Sbjct: 387 VNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 430
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D TYT ++ +A R + + V M E G+ D TYT V+ GDV
Sbjct: 443 AEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVK 502
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + +EM+ K P +V+Y M ++K A + MI G+ P+ TY +L+
Sbjct: 503 TGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 562
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+ + GK + E+ S G PD ++ + K T+T
Sbjct: 563 DGHCKHGKVTDIEELKSA---KGTVPDLGVYTSIVGEIVKKKTTKT 605
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 153/398 (38%), Gaps = 51/398 (12%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF E G+ + +Y V+H++ G + A ++ M+LK P ++SY+ +
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ + + + M ++GL PN Y Y ++ L R K EA E FS+M G+ PD
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
LI+ CK G+ R +++H +
Sbjct: 353 VYTTLIDGFCKRGDIRAA--------------------------------SKFFYEMHSR 380
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+T D+ +I G I ++V L + K ++ DS
Sbjct: 381 -------------DITPDVLTYTAIISGFCQI----GDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I C A + ++ + Y LI L K E++ EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
K G ++ +++ L + A K+ T TYT L+ Y +G D
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
KA +I K M KG+ P++ TFNVL+ G G + D E
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 22/342 (6%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F + SR D TYT ++ F + + +F M KG+ D+VT+T +++
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG + A + M C P +V+YT + L + A ++ EM + GL PN +
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY ++ L ++G EEA+++ + + AG+ D L++ CK+GE IL+ M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 233 KENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
L F + F + D L W + +P + N
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN------------ 600
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
LV + NL A ++ + + + D +++ +C R A F
Sbjct: 601 ------SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ ++ + Y LI +K F + E+ ++M + G
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 174/432 (40%), Gaps = 28/432 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y ++ + RI ++ LM+ KG D ++Y++V++ G++D + E M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K P Y + + +L ++ EA + + EMI++G+ P+ YT L++ + G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
A + F +M + PD +I C+ G+ + M L F E
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 248 LQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ + K D+ ++VH S N V TT I+G L K+ +L
Sbjct: 428 INGYCKAGHMKDA--FRVHNHMIQAGCSPN--VVTYTTLIDG-----------LCKEGDL 472
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL-LAFEYSVKMDLNLERTAYLA 365
+ + LL + +Q + ++I+ C + A+ L E+ LN + Y
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTT 531
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGH-----SLGVYLGALLIH-RLGSARRPVPAAKIFS 419
L+ K K EI++EM G + V + +H L + +
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ P T+ +L+ Y + A IYK MC +G+ P T+ L+ G K +
Sbjct: 592 IAPN----ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 480 SDAEIYRKEKKS 491
+A +E K
Sbjct: 648 KEAWFLFQEMKG 659
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++K W V + +G + + Y +++ + +++ + F M +GI D V YT
Sbjct: 297 LDKVWKLIE-VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ GD+ A + EM ++ P +++YTA + + EA ++ EM +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GL P+ T+T L+ +AG ++A + + M +AG P+ LI+ CK G+
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 33/320 (10%)
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK-AGETRTIILILRYM 232
+ V + LV G EA +F KM G+ +CN+ + + K +T T I++ R
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 233 KEN----RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
E +A V Q ++ + + LL ++P+ IS +T + G
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS-------YSTVVNG 290
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+ L + L+ + K ++ +S + +II + C + A AF
Sbjct: 291 YCRFGE-----------LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
++ + + Y LI K ++ EM + V +I
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 409 RRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
V A K+F L P+ + T+T LI Y AG A +++ M + G P+
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPD----SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
+ T+ L+ GL K G + A
Sbjct: 456 VVTYTTLIDGLCKEGDLDSA 475
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D AQ++LK + ++ T N ++ H +E NW+ ++G + T+ +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNS 601
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + + + +++ M +G+ D TY +++ A ++ A +++EMK K
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
++ +Y+ +K + EA +V+ +M + GL + +E
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD-----------------KEIF 704
Query: 192 EIFSKMQEAGVQPD 205
+ FS + G +PD
Sbjct: 705 DFFSDTKYKGKRPD 718
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 162/393 (41%), Gaps = 53/393 (13%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E GI+ + +Y +++ L G V A + +M + P +VSY+ + +K
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+A + +M +GL PN YTY ++ L + GK EA ++ +M + PD LI
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
K G RT N+ F E L + SP++I
Sbjct: 371 HGFFKLGHVRT---------ANKW------FDEMLSK----------------KISPDYI 399
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ TT I+G QG ++ +L ++ + ++ D +T+I+
Sbjct: 400 T-------YTTLIQG---FGQG--------GKVIEPQNLFHEMISRGLKPDEVTYTTLID 441
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
V C A V+M + Y ALI L K E+++EM K G L
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501
Query: 394 GVYLGALLIH---RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
V + +++ + G+ + + K + D TYT +I Y G DKA K+
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD-AITYTTVIDAYCRLGDIDKAHKL 560
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ M +G+ P++ TFNVL+ G LG + D +
Sbjct: 561 LQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 152/339 (44%), Gaps = 24/339 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+ + D TYTT++ FG+ ++ + +F M +G+ D VTYT+++ AG++
Sbjct: 391 SKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMV 450
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EM P IV+Y A + L + + A ++ EM ++GL N Y ++
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
+ +AG E+A+++ +M+ AG+ PD +I+ C+ G+ +L+ M + L
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Query: 238 --ALRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + V + ++ D LL W + P+ I+ N ++ Q
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK-------------Q 617
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ + ++ + + ++ + DS + +I+ +C R A ++ ++
Sbjct: 618 HCI-----RNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK 672
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
T+Y ALI K F + E+ EEM GH L
Sbjct: 673 GYVPTVTSYNALIKRFYKKRKFXEARELFEEM--RGHGL 709
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 169/383 (44%), Gaps = 27/383 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGE-AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G +R+TY +++ + + K + K + E+M +K I D V YT+++H G V
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIP-DNVVYTTLIHGFFKLGHVR 380
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++EM K+ P ++YT ++ +V E +++ EMI RGL P+ TYT L+
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ +AG+ A + ++M + G+ P+ LI+ CK GE T +L M++ L
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT--------DIEGPL 290
L ++ + A + + ++ + I D DA+ + T DI+
Sbjct: 501 LNVCIYNSMVNGICKAGNIEQAI-KLMKEMEVAGI-DPDAITYTTVIDAYCRLGDIDKAH 558
Query: 291 S-----IDQGL------VLILLKKKNLVAI----DSLLSGIMDKSIQLDSAVISTIIEVN 335
+D+GL +L+ ++ + D LL +++K I D+ +T+++ +
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C + ++ + + Y LI K + + +EM + G+ V
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678
Query: 396 YLGALLIHRLGSARRPVPAAKIF 418
LI R R+ A ++F
Sbjct: 679 TSYNALIKRFYKKRKFXEARELF 701
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 167/435 (38%), Gaps = 59/435 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R D +Y+T++D + + + + MQ KG+ + TY S++ L G
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + EM ++ P V YT + F V+ A + EM+ + + P+ TYT L++
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQ 406
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ GK E +F +M G++PD+ LI+ CKAG
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG------------------- 447
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
E + F + +E V +P ++ L+
Sbjct: 448 ------EMVNAFSLHNE------MVQMGMTPNIVTYG------------------ALIDG 477
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K L + LL + K +QL+ + ++++ C + A+ + ++ +
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL------GALLIHRLGSARRPVP 413
Y +I +L K ++++EM G V G ++ L R +
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++P+ TY L+ + S + KIYK M +G+ P T+N+L+ G
Sbjct: 598 WMLEKGIVPD----AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGH 653
Query: 474 EKLGRVSDAEIYRKE 488
K + +A KE
Sbjct: 654 CKARNLKEAWFLYKE 668
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G + Y +M++ +A I + + M+ GI+ DA+TYT+V+ GD+
Sbjct: 495 RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDI 554
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + +EM + PT+V++ M + +++ + M+++G+ P+ TY L
Sbjct: 555 DKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL 614
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
M+ +I+ +M+ GV PD NILI+ CKA + + + M E
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG T+ +++ F + + M EKGI DA+TY ++M ++
Sbjct: 567 RGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNT 626
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
I++ M+ + P +Y +K +KEA +YKEMI++G P +Y L++
Sbjct: 627 TTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIK 686
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ K+ EA E+F +M+ G+ D N ++ C + G+
Sbjct: 687 RFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGD 728
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY T++ +++ +++ M+ +G+ D+ TY ++ A ++
Sbjct: 602 KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKE 661
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++EM K PT+ SY A +K + + EA ++++EM GL + Y ++
Sbjct: 662 AWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
G E L + C+ IEKC
Sbjct: 722 MCYEEGDVEITLNL---------------CDEAIEKC 743
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 175/425 (41%), Gaps = 85/425 (20%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + + T ++ F A + + +L+ + G+ +A + +M L G++
Sbjct: 78 RGIRLEPTSCTGLMSRFPTAPEACA--FYLQLL-DAGLPPEAKLFNVLMRDLVRLGELAS 134
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N+++EM+ + T+VS+ + + + A +++ M + G+ P+ YTY L++
Sbjct: 135 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 194
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L R G+ E+A +F KM G++P+ ILI+ CK G+ T++ + R M+E
Sbjct: 195 GLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRER---- 250
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
V P DAV + +V
Sbjct: 251 -----------------------GVRP----------DAVTY------------NAIVNG 265
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + ++L + ++ + ++ D+ +T+I+ C D A+ + V + L+
Sbjct: 266 LCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLD 325
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y ALI L K ++ EM +AG
Sbjct: 326 EVTYTALISGLSKAGRSADAERVLGEMMEAG----------------------------- 356
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L P++ TYT +I + G L++ K M KG P + T+NV++ G KLG++
Sbjct: 357 LEPDN----TTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 412
Query: 480 SDAEI 484
+A++
Sbjct: 413 KNADM 417
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 91/175 (52%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG + +T ++D + +M + M+E+G+ DAVTY ++++ L A D+
Sbjct: 214 GRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLK 273
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A I EM+ P V+YT + + + A ++ + M+ G+ + TYT L+
Sbjct: 274 SASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALI 333
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
L +AG+ +A + +M EAG++PD ++I+ C+ G+ +T + +L+ M+
Sbjct: 334 SGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ 388
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS G D TYTT++D + + + + + + M +G+ +D VTYT+++ LS AG
Sbjct: 283 RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRS 342
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + EM P +YT + VK + KEM +G P TY V+
Sbjct: 343 ADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVI 402
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
M + G+ + A + + M GV PD NIL++ CK G+ I
Sbjct: 403 MNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDI 450
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG D TY +++ A+ + S + M+ G+ D VTYT+++ ++
Sbjct: 248 RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEEL 307
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I + M + V+YTA + L R +A V EM++ GL P+ TYT++
Sbjct: 308 DMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMV 367
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
++ R G + L + +MQ G +P N+++ CK G+ + ++L M
Sbjct: 368 IDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAM 422
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG ++ TM+ A + + + M E G+ D TY +++ L G +
Sbjct: 143 QSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRI 202
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++E+M + P V +T + + ++++EM +RG+ P+ TY +
Sbjct: 203 EDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAI 262
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ L RA + A I +M+ AG++PD LI+ CK E
Sbjct: 263 VNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 306
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D TYT ++ +A R + + V M E G+ D TYT V+ GDV
Sbjct: 319 AEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVK 378
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + +EM+ K P +V+Y M ++K A + MI G+ P+ TY +L+
Sbjct: 379 TGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILL 438
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+ + GK + E+ S G PD ++ + K T+T
Sbjct: 439 DGHCKHGKVTDIEELKSA---KGTVPDLGVYTSIVGEIVKKKTTKT 481
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 178/427 (41%), Gaps = 19/427 (4%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S G D ++Y+ +++ F + + E M+ I V+YTS++H L +
Sbjct: 418 KSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNML 477
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV+I+ + C Y + + + A + +EMI L P ++ L
Sbjct: 478 QNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSL 537
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + G +++ALE+F+ M G+ PD ACN +++ C+AG + + +L +E+
Sbjct: 538 IRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGF 597
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
L + + +K+ E +P+ + E + + ++ + L+
Sbjct: 598 NLNPHSYNAII--YKLCKEG-------YPERALELLP-----RMLKRNVLPSVVNYSTLI 643
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K+ N +L + ++ I + A + ++ + + A F+ + L
Sbjct: 644 SGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLC 703
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
L++ +Y LI K + EEM++ G S V +I + R A +
Sbjct: 704 LDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWV 763
Query: 418 FSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + D TYT LI Y G D+A K+Y M KG+ P T NVL GL K
Sbjct: 764 FDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL--GL-K 820
Query: 476 LGRVSDA 482
G V +
Sbjct: 821 AGTVQEG 827
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 182/433 (42%), Gaps = 71/433 (16%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS---- 112
++ G D T +L EA R+ ++ VFE ++++G + + TYT +M++
Sbjct: 273 AKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVG 332
Query: 113 -NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+AG AV + + + E PT+V+Y+ Y+ L V+ A + + + P N
Sbjct: 333 CDAGMRQAAVILGKIYRSGE-KPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNS 391
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
+++ ++ + G+ EAL++ +M+ +G+ PD + +ILI C G+ + ++
Sbjct: 392 HSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEE 451
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
M+ H Q P +S T+ I G
Sbjct: 452 ME-------------------------------HSQIKPSIVS-------YTSLIHG--- 470
Query: 292 IDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
L KKN++ A+D + I S + DS V T+I+ C D A+ E
Sbjct: 471 ---------LCKKNMLQNAVD-IFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLE 520
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL--GS 407
+ +L + +LI KL F + E+ M + G++ + + + GS
Sbjct: 521 EMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRD----GIWPDTIACNYILDGS 576
Query: 408 ARRPVPAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
R + +LL + Q+ +Y A+I G ++AL++ M ++ + PS
Sbjct: 577 CRAGY-FKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPS 635
Query: 463 LGTFNVLLAGLEK 475
+ ++ L++G K
Sbjct: 636 VVNYSTLISGFAK 648
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/449 (18%), Positives = 171/449 (38%), Gaps = 27/449 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIF----GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSN 113
+ RG + + +TYT M++ + G + + + G VTY++ +H L
Sbjct: 309 KDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCK 368
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
G+V+ A+ + + S+ + V EA V +EM G+ P+ Y+
Sbjct: 369 VGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYS 428
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
Y++L+ G + L++ +M+ + ++P + LI CK + + I +
Sbjct: 429 YSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIG 488
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ V++ + F + + DS + + E + + + D
Sbjct: 489 ASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFD 548
Query: 294 QGLVLI--LLKK---KNLVAIDSLLSG----------------IMDKSIQLDSAVISTII 332
Q L + +L+ + +A + +L G + L+ + II
Sbjct: 549 QALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAII 608
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C + AL +K ++ Y LI K + F + + M K G +
Sbjct: 609 YKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGIT 668
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKI 450
+ +L+ + + A IF + E C +YT LI + + KA +
Sbjct: 669 FNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWAL 728
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
++ M R+G P++ T+ ++ G K R+
Sbjct: 729 FEEMSREGCSPNVITYTCIIDGFCKSNRI 757
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 6/202 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGD 116
+G + + FTYTT++ F + ++K F L+ E K IN D T+ ++ L+ G
Sbjct: 230 KGISPNVFTYTTLIHGFC---IMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGK 286
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D A++++EEMK K +P IV+YT+ + L N ++ A + K+M ++G+ PN Y+YT+
Sbjct: 287 IDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTI 346
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ L + G+ E A + F + G + N++I CKAG ++ + M+
Sbjct: 347 LLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKG 406
Query: 237 LALRYPVFKEALQTFKVADEND 258
FK + DEND
Sbjct: 407 CMPNAITFKTIICALLEKDEND 428
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D YTT++ + K + ++ M KGI+ + TYT+++H G++ A ++
Sbjct: 200 DLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLL 259
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EMKLK P + ++ + L ++ EA +++EM + + PN TYT L++ L +
Sbjct: 260 NEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKN 319
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
E A+ + KM+E G+QP+ + IL++ CK G
Sbjct: 320 HHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGR 356
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 94/187 (50%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
K L F+ ++GF D+ +Y T+++ +A ++ + ++ + D V YT++
Sbjct: 148 KRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTI 207
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H L + A +++ EM +K P + +YT + + +KEA + EM + +
Sbjct: 208 IHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNI 267
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ YT+ +L++ L + GK +EA+ +F +M+ + P+ LI+ CK I
Sbjct: 268 NPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIA 327
Query: 228 ILRYMKE 234
+ + MKE
Sbjct: 328 LCKKMKE 334
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG++ + T T++ I + + + +G +D V+Y ++++ L AG+
Sbjct: 125 RGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKA 184
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +++ P +V YT + L N + +A D+Y EMI +G+ PN +TYT L+
Sbjct: 185 VARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIH 244
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
G +EA + ++M+ + PD NILI+ K G+ + + MK +
Sbjct: 245 GFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNM 302
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 143/358 (39%), Gaps = 50/358 (13%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A V+ +++RG PN T L++ L G+ + AL K+ G Q D+ + LI
Sbjct: 115 AFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLIN 174
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
CKAGET+ + +LR ++ + + ++ + + LL +S E I
Sbjct: 175 GLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLC----KNKLLGDACDLYS-EMI- 228
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
V+ ++ ++ ++ G ++ NL SLL+ + K+I D + +I+
Sbjct: 229 ----VKGISPNVFTYTTLIHGFCIM----GNLKEAFSLLNEMKLKNINPDVYTFNILIDA 280
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
+ D A+ FE ++ Y +LI L K + + + ++M + G
Sbjct: 281 LAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
VY +YT L+ G + A + ++ +
Sbjct: 341 VY---------------------------------SYTILLDALCKGGRLENAKQFFQHL 367
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLL 512
KG H ++ T+NV++ GL K G D K ++ +A+ + IC LL
Sbjct: 368 LVKGYHLNVRTYNVMINGLCKAGLFGDV---MDLKSKMEGKGCMPNAITFKTIICALL 422
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + ++YT +LD + R+ + K F+ + KG +++ TY +++ L AG
Sbjct: 333 KEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 392
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+++ +M+ K C P +++ + L D +A +EMI RGL
Sbjct: 393 GDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 147/378 (38%), Gaps = 41/378 (10%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVS------------------RSRGFNHDRFTYTTMLDIF 76
+ N++L PP +LF N +S G D T + +++ F
Sbjct: 48 SFNRMLLMRPP-PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCF 106
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
I+ VF + ++G + +A+T +++ L G++ A++ +++ +
Sbjct: 107 CHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQ 166
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
VSY + L K + +++ + P+ YT ++ L + +A +++S+
Sbjct: 167 VSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSE 226
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKV 253
M G+ P+ LI C G + +L MK + + + +AL
Sbjct: 227 MIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGK 286
Query: 254 ADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
DE SL ++ H P ++ T+ I+G L K +L +L
Sbjct: 287 IDEAMSLFEEMKHKNMFPNIVT-------YTSLIDG-----------LCKNHHLERAIAL 328
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+ ++ IQ + + +++ C R + A F++ + +L Y +I L K
Sbjct: 329 CKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCK 388
Query: 373 LNTFPKVAEIVEEMTKAG 390
F V ++ +M G
Sbjct: 389 AGLFGDVMDLKSKMEGKG 406
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 135/372 (36%), Gaps = 59/372 (15%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV + M L P + + L N R ++K+ G+ P+ T ++L+
Sbjct: 45 AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
A +F+ + + G P+ N LI+ C GE + AL
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKR-------------AL 151
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ K Q F++ D V + T L+
Sbjct: 152 HFHD-KVVAQGFQL-----------------------DQVSYGT------------LING 175
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K A+ LL + S++ D + +TII C ++ A + + ++
Sbjct: 176 LCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPN 235
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y LI + + ++ EM + VY +LI L + A +F
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFE 295
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++ P TYT+LI ++A+ + K M +GI P++ ++ +LL L
Sbjct: 296 EMKHKNMFPN----IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDAL 351
Query: 474 EKLGRVSDAEIY 485
K GR+ +A+ +
Sbjct: 352 CKGGRLENAKQF 363
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A+ N + + + N D +T+ ++D + +I +FE M+ K + + VTYT
Sbjct: 252 LKEAFSLLNEM-KLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYT 310
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI-- 163
S++ L ++ A+ + ++MK + P + SYT + L R++ A ++ ++
Sbjct: 311 SLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVK 370
Query: 164 ---------------------------------QRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+G PN T+ ++ L+ + ++A
Sbjct: 371 GYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKA 430
Query: 191 LEIFSKMQEAGV 202
+ +M G+
Sbjct: 431 EKFLREMIARGL 442
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF + +YT ++++ + K +++ +F MQEK + +TYT MH L A V+
Sbjct: 298 QGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNK 357
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++E MK C P Y++ + +L + R+K+A DV+++M ++G+ P+ TY ++
Sbjct: 358 ALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMIT 417
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ E AL++ +M+E +PD L++ CC+ + + +L +M +N +++
Sbjct: 418 SACTHLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISI 477
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 86/168 (51%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
++ +L + +A+++ + + + M ++G + V+YT + D I+ EM
Sbjct: 271 SFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEM 330
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ K C P +++YT +M L +V +A +VY+ M P+ Y+ L+ L ++G+
Sbjct: 331 QEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRL 390
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++A ++F M++ GV PD N +I C E + +LR M+E+
Sbjct: 391 KDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEED 438
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 101/485 (20%), Positives = 180/485 (37%), Gaps = 73/485 (15%)
Query: 5 ISNVYKILK--YSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWL----FFNWVSR 58
I V +ILK Y DS L + + + ++Q+L W+ F W
Sbjct: 101 IDRVSEILKKHYPCTDSVVQALNDCGVNPTNNLISQLLNR---FCNDWVPALGLFTWAKH 157
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G+ H Y M+DI G K+ S M + + M+ + VT VM L+ AG+
Sbjct: 158 QTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNFQ 217
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV + ++ I + M L V+ A + E + + + ++ +L+
Sbjct: 218 DAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFME-FKDSIHVDFQSFNILL 276
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
+A K ++A +I +M + G QP+ + IE CK + R + I M+E
Sbjct: 277 HGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCK 336
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-LSIDQ 294
+ Y +F AL K N +L + E + ++ P S
Sbjct: 337 PNVITYTIFMHALG--KAKQVNKAL----------------EVYEMMKSNCCVPDASFYS 378
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF----EY 350
L+ +L + L + + + + D +T+I C H + AL E
Sbjct: 379 SLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEED 438
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
S K D+ Y L+ + + + ++ M K +++ + LG
Sbjct: 439 SCKPDIQ----TYAPLLKMCCRKKRIKVLKFLLNHMFK--NNISIDLG------------ 480
Query: 411 PVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
TY L+G +G + A ++ M KG+ P T+ +L+
Sbjct: 481 -------------------TYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKMLV 521
Query: 471 AGLEK 475
LE+
Sbjct: 522 EELEQ 526
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +L + KRI +K++ M + I+ID TY ++ L +G ++ A + +EEM
Sbjct: 446 TYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEM 505
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+K P +Y ++ L N+ + + K M Q
Sbjct: 506 VMKGLIPRDRTYKMLVEELEQNNLTEAKEKIQKLMFQ 542
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 153/398 (38%), Gaps = 51/398 (12%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF E G+ + +Y V+H++ G + A ++ M+LK P ++SY+ +
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ + + + M ++GL PN Y Y ++ L R K EA E FS+M G+ PD
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
LI+ CK G+ R +++H +
Sbjct: 796 VYTTLIDGFCKRGDIRAA--------------------------------SKFFYEMHSR 823
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+T D+ +I G I ++V L + K ++ DS
Sbjct: 824 -------------DITPDVLTYTAIISGFCQI----GDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I C A + ++ + Y LI L K E++ EM
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
K G ++ +++ L + A K+ T TYT L+ Y +G D
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
KA +I K M KG+ P++ TFNVL+ G G + D E
Sbjct: 987 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1024
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 22/342 (6%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F + SR D TYT ++ F + + +F M KG+ D+VT+T +++
Sbjct: 816 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG + A + M C P +V+YT + L + A ++ EM + GL PN +
Sbjct: 876 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY ++ L ++G EEA+++ + + AG+ D L++ CK+GE IL+ M
Sbjct: 936 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Query: 233 KENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
L F + F + D L W + +P + N
Sbjct: 996 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN------------ 1043
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
LV + NL A ++ + + + D +++ +C R A F
Sbjct: 1044 ------SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ ++ + Y LI +K F + E+ ++M + G
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 1139
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 174/432 (40%), Gaps = 28/432 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y ++ + RI ++ LM+ KG D ++Y++V++ G++D + E M
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K P Y + + +L ++ EA + + EMI++G+ P+ YT L++ + G
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
A + F +M + PD +I C+ G+ + M L F E
Sbjct: 811 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870
Query: 248 LQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ + K D+ ++VH S N V TT I+G L K+ +L
Sbjct: 871 INGYCKAGHMKDA--FRVHNHMIQAGCSPN--VVTYTTLIDG-----------LCKEGDL 915
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL-LAFEYSVKMDLNLERTAYLA 365
+ + LL + +Q + ++I+ C + A+ L E+ LN + Y
Sbjct: 916 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTT 974
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGH-----SLGVYLGALLIH-RLGSARRPVPAAKIFS 419
L+ K K EI++EM G + V + +H L + +
Sbjct: 975 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ P T+ +L+ Y + A IYK MC +G+ P T+ L+ G K +
Sbjct: 1035 IAPN----ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090
Query: 480 SDAEIYRKEKKS 491
+A +E K
Sbjct: 1091 KEAWFLFQEMKG 1102
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++K W V + +G + + Y +++ + +++ + F M +GI D V YT
Sbjct: 740 LDKVWKLIE-VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ GD+ A + EM ++ P +++YTA + + EA ++ EM +
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 858
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GL P+ T+T L+ +AG ++A + + M +AG P+ LI+ CK G+
Sbjct: 859 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 914
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 33/320 (10%)
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK-AGETRTIILILRYM 232
+ V + LV G EA +F KM G+ +CN+ + + K +T T I++ R
Sbjct: 621 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 680
Query: 233 KEN----RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
E +A V Q ++ + + LL ++P+ IS + V E
Sbjct: 681 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE- 739
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+D+ LI + K+ K ++ +S + +II + C + A AF
Sbjct: 740 ---LDKVWKLIEVMKR--------------KGLKPNSYIYGSIIGLLCRICKLAEAEEAF 782
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
++ + + Y LI K ++ EM + V +I
Sbjct: 783 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842
Query: 409 RRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
V A K+F L P+ + T+T LI Y AG A +++ M + G P+
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPD----SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
+ T+ L+ GL K G + A
Sbjct: 899 VVTYTTLIDGLCKEGDLDSA 918
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D AQ++LK + ++ T N ++ H +E NW+ ++G + T+ +
Sbjct: 986 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNS 1044
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + + + +++ M +G+ D TY +++ A ++ A +++EMK K
Sbjct: 1045 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 1104
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
++ +Y+ +K + EA +V+ +M + GL + +E
Sbjct: 1105 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD-----------------KEIF 1147
Query: 192 EIFSKMQEAGVQPD 205
+ FS + G +PD
Sbjct: 1148 DFFSDTKYKGKRPD 1161
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG-------- 96
P + FFNW + F H Y M+D+ G+A + + F M++ G
Sbjct: 125 PFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAF 184
Query: 97 --------------------------INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
D V YTS++H AG++ A ++ EMK+
Sbjct: 185 SVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMA 244
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P + +Y+ + L + ++ A DV+ EMI G PN T+ LM V+AG+ E+
Sbjct: 245 GIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKV 304
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+++++M+ G PD N LIE C+ + IL +K+
Sbjct: 305 LQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK 348
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 34/224 (15%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D YT+++ + A IS + VF M+ GI + TY+ V+ L +G + A
Sbjct: 211 FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAH 270
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+++ EM C P +++ M++ R ++ VY +M + G PP+ TY L+E
Sbjct: 271 DVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESH 330
Query: 182 VRAGKYEEALEI----------------------------------FSKMQEAGVQPDKA 207
R EEA++I F+KM++ +P+
Sbjct: 331 CRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTV 390
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
NIL+ T ++ + + M EN + ++ + TF
Sbjct: 391 TYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTF 434
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 32 DSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
++ T N +++ H EK +N + R G D TY +++ + +
Sbjct: 284 NAITFNNLMRVHVKAGRTEKVLQVYNQMKR-LGCPPDAITYNFLIESHCRDDNLEEAVKI 342
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
++ KG N++A ++ + +S GDV+ A ++ +MK +C P V+Y M++
Sbjct: 343 LNSVK-KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFAD 401
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM-QEAGVQPDKA 207
+ KEM + + PN TY VL+ G + A F +M +E ++P
Sbjct: 402 KKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLP 461
Query: 208 ACNILIEKCCKAGETR 223
+++++ KAG+ +
Sbjct: 462 VYEMVLQQLRKAGQLK 477
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +TY+ ++D + +I+ VF M + G + +A+T+ ++M AG +
Sbjct: 245 GIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKV 304
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV---------------------- 158
+ ++ +MK C P ++Y ++ +D ++EA +
Sbjct: 305 LQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCI 364
Query: 159 ------------YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ +M PN TY +LM + L++ +M E ++P+
Sbjct: 365 SKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNA 424
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENR-LALRYPVFKEALQTFKVADE 256
+LI C G + M E + L PV++ LQ + A +
Sbjct: 425 NTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQ 475
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 134/326 (41%), Gaps = 36/326 (11%)
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
Y +++ +AG EA+ F++M++ G +PDK A +++I +
Sbjct: 149 YMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISS----------------LS 192
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQ--VHPQFSPEFISDNDAV--EFVTTDIEGP 289
+ R A+ F ++L K E D +++ VH IS+ + V E I+
Sbjct: 193 KKRRAIEAQSFFDSL---KDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPN 249
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
+ ++ L + + + S ++D ++ + ++ V+ R + L +
Sbjct: 250 VYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYN 309
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA----GHSLGVYLGALLIHRL 405
++ + Y LI + + + +I+ + K S G I +L
Sbjct: 310 QMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGC--ISKL 367
Query: 406 GSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
G A ++F+ + +D KC T TY L+ ++ S D LK+ K M I P+
Sbjct: 368 GDVNS---AHRMFAKM-KDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPN 423
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKE 488
T+ VL++ +G ++A + KE
Sbjct: 424 ANTYRVLISTFCGIGHWNNAYSFFKE 449
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+A FN + S D T+ ++D + +S + + ++M EKG+ + TY S
Sbjct: 276 EEASALFNEM-MSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNS 334
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M+ V A +++ M K C P +VSY + R+ EA +++ EM RG
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG 394
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L PN + Y L+ L +AG++ EA E+F MQ G PD C IL++ CK G +
Sbjct: 395 LIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNAL 454
Query: 227 LILRYMKENRL 237
+ R M+++ L
Sbjct: 455 RLFRAMQDSCL 465
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 122/255 (47%), Gaps = 4/255 (1%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + +I Y T S ++ L I+ D + N ++ +++ F+ + + GF
Sbjct: 91 LSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGF 150
Query: 63 NHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D T++++++ + E K +M++ F+ M G + TY +++ G AV
Sbjct: 151 EPDAVTFSSLINGLCFEDKFARAMEF-FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAV 209
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ ++M P IV Y + L + V EA D++ E+ +G+ P+ +TY++LM L
Sbjct: 210 GLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGL 269
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ + EEA +F++M + PD NIL++K CK G I++ M E + Y
Sbjct: 270 CNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNY 329
Query: 242 PVFKEALQTFKVADE 256
+ + + + ++
Sbjct: 330 ATYNSLMNGYCLQNK 344
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 165/390 (42%), Gaps = 26/390 (6%)
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
I D + +++ S VD A ++ ++ P V++++ + L D+ A
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ + EM+ G PN +TY +++ + GK A+ + KM +AG +PD N +I+
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234
Query: 217 CKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHP-QFSPEF 272
CK + I +K + Y + L +E +L ++ P+
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
++ N V+ + EG LS QG++ I++ +K ++ + A ++++
Sbjct: 295 VTFNILVDKLCK--EGMLSEAQGIIKIMI----------------EKGVEPNYATYNSLM 336
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C + A + F+ + +Y LI K + E+ +EM+ G
Sbjct: 337 NGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLI 396
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALK 449
+ LI L A R A ++F + + Q C+ T T L+ G D AL+
Sbjct: 397 PNTFNYNTLISGLCQAGRHCEARELFKDM-QAQGCSPDLVTCTILLDSLCKLGYLDNALR 455
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+++ M + P+L T+++L+ + K G++
Sbjct: 456 LFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 34 YTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
+T N ++K + K + + + G D Y T++D + + +S +F
Sbjct: 190 HTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSE 249
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
++ KG+ D TY+ +MH L N+ + A ++ EM P +V++ + L
Sbjct: 250 IKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGM 309
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ EA + K MI++G+ PN TY LM K EA +F M G P+ + NI
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369
Query: 212 LIEKCCKA 219
LI CKA
Sbjct: 370 LINGYCKA 377
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 84/162 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY ++++ + ++ + VF+ M KG + V+Y +++ A +D
Sbjct: 323 KGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDE 382
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++EM + P +Y + L R EA +++K+M +G P+ T T+L++
Sbjct: 383 ARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLD 442
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L + G + AL +F MQ++ ++P+ +ILI K+G+
Sbjct: 443 SLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D FTY+ ++ + + +F M I D VT+ ++ L G +
Sbjct: 251 KGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGML 310
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A I + M K P +Y + M L ++V EA V+ MI +G PN +Y +L
Sbjct: 311 SEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNIL 370
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ +A + +EA E+F +M G+ P+ N LI C+AG
Sbjct: 371 INGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR 414
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 152/376 (40%), Gaps = 73/376 (19%)
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
RV A V ++I+ G P+ T++ L+ L K+ A+E F +M +G QP+ N
Sbjct: 134 RVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYN 193
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
+I+ CK G+T + +L+ M K D +++
Sbjct: 194 TIIKGFCKIGKTTVAVGLLKKMD------------------KAGGRPDIVIYN------- 228
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAVI 328
T I+G L K LV A+D + S I K ++ D
Sbjct: 229 -------------TIIDG------------LCKDRLVSEALD-IFSEIKGKGVRPDVFTY 262
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
S ++ C+ +++ A F + +++ + + L+ L K + I++ M +
Sbjct: 263 SILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIE 322
Query: 389 AG--------HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFS 440
G +SL G L +++ AR A +P +Y LI Y
Sbjct: 323 KGVEPNYATYNSL--MNGYCLQNKVFEARMVFDAMITKGCMPN----VVSYNILINGYCK 376
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKD 500
A D+A +++ M +G+ P+ +N L++GL + GR +A R+ K +QA S D
Sbjct: 377 AQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEA---RELFKDMQAQGCSPD 433
Query: 501 AVP---MEEKICDLLY 513
V + + +C L Y
Sbjct: 434 LVTCTILLDSLCKLGY 449
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + F Y T++ +A R + +F+ MQ +G + D VT T ++ L G +D
Sbjct: 393 RGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDN 452
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
A+ ++ M+ P +V+Y ++ ++ + ++
Sbjct: 453 ALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 177/424 (41%), Gaps = 32/424 (7%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
N + Y+ ++ ++ + + + M+E GI+ Y S+MH + A D +
Sbjct: 355 NLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLI 414
Query: 123 IWEEMKLKEC--YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++E +LKEC P+I+SY + + +V +A V KEM G+ N TY++L+
Sbjct: 415 VFE--RLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLING 472
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ + A IF M ++G+QPD+A N+L+E CK G I I MK+ R+
Sbjct: 473 FIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPS 532
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID-QGLVLI 299
F+ ++ F VA + L D ++ + P + L+
Sbjct: 533 NRTFRPIIEGFAVAGDMKRAL---------------DTLDLMRRSGCAPTVMTYNALIHG 577
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM---DL 356
L++K + S+L + I + + I+ + AFEY K+ L
Sbjct: 578 LIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMR---GYAASGDIGKAFEYFTKIKESGL 634
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP--VPA 414
L+ Y L+ K + EM+ ++ +LI G ARR A
Sbjct: 635 KLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILID--GWARRGDVWEA 692
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
A + + ED T+T+ I AG +A + + M G+ P++ TF L+ G
Sbjct: 693 ADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKG 752
Query: 473 LEKL 476
K+
Sbjct: 753 WAKV 756
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 90/172 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR Y +++ F + + +FE M+++ + T+ ++ + AGD+ A
Sbjct: 493 GLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRA 552
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ + M+ C PT+++Y A + L +V+ A V +M G+ PN +TYT++M
Sbjct: 553 LDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRG 612
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+G +A E F+K++E+G++ D L+ CCK+G ++ + + R M
Sbjct: 613 YAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 664
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ +F + S G D + Y T+L ++ R+ S V M + I + Y +
Sbjct: 621 KAFEYFTKIKES-GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 679
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + GDV A ++ ++MK P I ++T+Y+ ++ A +V +EM GL
Sbjct: 680 IDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGL 739
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGET 222
PN T+T L++ + + AL+ F +M+ AG++PD+AA + L+ G T
Sbjct: 740 KPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGST 799
Query: 223 RTIIL-ILRYMKENRLAL 239
T IL + R M EN L +
Sbjct: 800 YTGILSVCREMFENDLTV 817
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 165/423 (39%), Gaps = 64/423 (15%)
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ FE M+ +GI +A +TS++H + A D+ GA++ EEMK + T+V+Y+ +
Sbjct: 273 RATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAG 332
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG---- 201
+ + A ++KE + N Y+ ++ ++G + A E+ +M+E G
Sbjct: 333 YGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAP 392
Query: 202 ------------VQPDKAACNILIEKCCKAGETRTII----LILRYMKENRLALRYPVFK 245
V D+ C I+ E+ + G +II LI Y+K ++ V K
Sbjct: 393 IDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSK 452
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
E +++ + N + ++ FI +D
Sbjct: 453 E-MESHGIKHNNKTYSMLING-----FIHLHD---------------------------- 478
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
S+ ++ +Q D A+ + ++E C D A+ FE K + +
Sbjct: 479 FANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRP 538
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RLGSARRPVPA---AKIFS 419
+I + + ++ M ++G + V LIH R R V I
Sbjct: 539 IIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAG 598
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ P + TYT ++ Y ++G KA + + + G+ + + LL K GR+
Sbjct: 599 IAPNEH----TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRM 654
Query: 480 SDA 482
A
Sbjct: 655 QSA 657
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 36/224 (16%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A F + + R +R T+ +++ F A + +LM+ G +TY
Sbjct: 514 MDRAIRIFERMKKERMQPSNR-TFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYN 572
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM---------------------- 143
+++H L V+ AV++ ++M + P +YT M
Sbjct: 573 ALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 632
Query: 144 -------------KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ + R++ A V +EM + +P N + Y +L++ R G EA
Sbjct: 633 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEA 692
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++ +M+E G+ P+ I CCKAG+ + +++ M +
Sbjct: 693 ADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMAD 736
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 134/340 (39%), Gaps = 36/340 (10%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A ++ M RG+ PN + +T L+ A AL +M+ G++ +ILI
Sbjct: 272 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILI- 330
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND---SLLWQVHPQFSPE 271
AG Y K N +FKEA K+ + N S + H Q
Sbjct: 331 ----AG----------YGKTNDAESADKLFKEA--KTKLDNLNGIIYSNIIHAHCQSGNM 374
Query: 272 FISDNDAVEFVTTDIEGPL----SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
++ E I+ P+ S+ G + +KK L+ + L SI +
Sbjct: 375 DRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCL 434
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
I+ +++ + AL + + Y LI I L+ F I E+M
Sbjct: 435 INLYVKIG----KVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 490
Query: 388 KAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
K+G + LL+ ++G+ R A +IF + ++ Q T+ +I + AG
Sbjct: 491 KSGLQPDRAIYNLLVEAFCKMGNMDR---AIRIFERMKKERMQPSNRTFRPIIEGFAVAG 547
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+AL M R G P++ T+N L+ GL + +V A
Sbjct: 548 DMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERA 587
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/439 (18%), Positives = 163/439 (37%), Gaps = 75/439 (17%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF +Y +++++ + ++ V + M+ GI + TY+ +++ + D A
Sbjct: 423 GFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANA 482
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+I+E +MI+ GL P+ Y +L+E
Sbjct: 483 FSIFE-----------------------------------DMIKSGLQPDRAIYNLLVEA 507
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G + A+ IF +M++ +QP +IE AG+ + + L M+ + A
Sbjct: 508 FCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPT 567
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG-PLSIDQGLVLI 299
+ + + + + V + S I+ N+ T + G S D G
Sbjct: 568 VMTYNALIHGLIRKHQVERAV-SVLDKMSIAGIAPNEHT--YTIIMRGYAASGDIGKAFE 624
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K I + ++LD + T++ C R AL +V +++ +
Sbjct: 625 YFTK------------IKESGLKLDVYIYETLLRACCKSGRMQSAL-----AVTREMSFQ 667
Query: 360 RTA-----YLALIGILIKLNTFPKVAEIVEEMTKAG-----HSLGVYLGALLIHRLGSAR 409
+ Y LI + + A+++++M + G H+ Y+ A + G +
Sbjct: 668 KIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACC--KAGDMQ 725
Query: 410 RP---VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
R + L P T+T LI + D+ALK ++ M G+ P +
Sbjct: 726 RAENVIQEMADVGLKPN----VKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAY 781
Query: 467 NVLLAGLEKLGRVSDAEIY 485
+ L+ L V + Y
Sbjct: 782 HCLVTSLLSRATVMEGSTY 800
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 190/469 (40%), Gaps = 38/469 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG + TY ++ + I +F+ M++KGI + Y S+++ G +D
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + M + PT SY+ + L N + A ++++EM +RG+ N YT+T L+
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALI 485
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ K +EA +F KM ++ V P++ N++IE C G R + M E L
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545
Query: 239 LRYPVFKEALQ----TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
++ + T V+ N EF++D + V +
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKAN-------------EFVADLENSYAVLNNFS-----LT 587
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ L ++ L + + ++LD + I+ ++ + + F +
Sbjct: 588 ALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR------LGSA 408
+ + Y +I L K + ++M G+S +LI+ LGSA
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSA 707
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
++LP TY + + + G +KA ++ M +G S+ +FN+
Sbjct: 708 ELLCKEMLAGNVLPN----KFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 762
Query: 469 LLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
L+ GL K G++ +A ++ RK I S D + I +L GD
Sbjct: 763 LIKGLCKAGKIQEAIDLMRK----ITESGFSPDCISYSTIIHELCKMGD 807
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 188/479 (39%), Gaps = 59/479 (12%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+S S G +++T + +L + ++ + + +F+ M + G+++D YT+ + +
Sbjct: 153 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 212
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++DGA + M+ + + V Y M L N RV+EA +V M+ G+ + TY
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK-------------CCKAGET 222
L+ R + E AL I M G P +A C+ +I++ CK G+
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ + Y + F +A + FK E
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFK---------------------------EMA 365
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+E P + +++ L K+ ++ L + DK I++ +++I C
Sbjct: 366 GRGLE-PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D A VK L +Y LI L + E+ EM + G + Y L
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTAL 484
Query: 402 IHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
I+ ++ AA++F +++P + T+ +I Y G+ KA ++Y M
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNE----VTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
G+ P T+ L++GL VS A AD + AV + LLYG
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKA-------NEFVADLENSYAVLNNFSLTALLYG 592
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G++ + T+T +++ ++ + S + + + M + + TY + + + GD++ A
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M L+ +IVS+ +K L +++EA D+ +++ + G P+C +Y+ ++
Sbjct: 743 KDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHE 801
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L + G +A E++++M G++PD A NI I C GE+
Sbjct: 802 LCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGES 843
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 14 YSTWDSAQDLLKNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
Y WD ++ + + S+T V LK H EK+ + F + + +G D YT
Sbjct: 603 YHLWDEMA--VRGVKLDLVSFTIIVYAALKQHDK-EKSCVLFREM-KEQGVKPDDIFYTC 658
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
M+D + + + ++ M G + + VT+T +++ L +G + A + +EM
Sbjct: 659 MIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P +Y ++ +++A D++ M+Q G + ++ +L++ L +AGK +EA+
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAI 777
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ K+ E+G PD + + +I + CK G+
Sbjct: 778 DLMRKITESGFSPDCISYSTIIHELCKMGD 807
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 183/444 (41%), Gaps = 34/444 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + +T+T +++ F + K++ +F+ M + + + VT+ ++ G++
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++++M P +Y + + L L V +A + ++ N ++ T L+
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
L R G++ E ++ +M GV+ D + I++ K + ++ R MKE +
Sbjct: 592 GLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Query: 239 --LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y +AL +EN I + + + D P ++ +
Sbjct: 652 DDIFYTCMIDALSK----EEN--------------MIQALNCWDQMVIDGYSPNTVTHTV 693
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC--DHRRRDGALLAFE--YSV 352
++ L K + LL M L V+ NC D+ +G + + +S
Sbjct: 694 LINNLCKSGYLGSAELLCKEM-----LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 748
Query: 353 KMDLNLER-TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
+ +L ++ LI L K + +++ ++T++G S + +IH L
Sbjct: 749 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 412 VPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A ++++ L + Y I G +DKAL IY M R G+ P+ T+ L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868
Query: 470 LAGLEKLGRVSDAEIYRKEKKSIQ 493
L+G+ + D +R K+ IQ
Sbjct: 869 LSGISLMLHY-DFSCFRGTKQYIQ 891
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 6/194 (3%)
Query: 29 IKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
I W++YT +N K E A LF + + N T+ M++ + I
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN--EVTFNVMIEGYCLVGNIRK 531
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+++ M E G+ D TY S++ L V A +++ S TA +
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
LF R E ++ EM RG+ + ++T+++ ++ E++ +F +M+E GV+P
Sbjct: 592 GLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Query: 205 DKAACNILIEKCCK 218
D +I+ K
Sbjct: 652 DDIFYTCMIDALSK 665
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINID 100
K M+KA F +S + G D +TY T+++ + I K + + M+ KG +
Sbjct: 196 KNSGTMDKAMHLFRTMS-NHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPS 254
Query: 101 AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK 160
VTYTS++H L +VD A+ + E+MK K P + +Y++ M A D+ +
Sbjct: 255 VVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILE 314
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
MIQ+ L PN +Y+ L+ L GK EALEIF +M+ G +PD
Sbjct: 315 LMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPD 359
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/451 (19%), Positives = 178/451 (39%), Gaps = 69/451 (15%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ 93
V Q+++ ++KA + F+ + + GF HD T++ M+ A + + + + M+
Sbjct: 47 VQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAETLLDRMK 106
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E+ I++ S+ ++ ++ +M+ C PT SY + + IL +++K
Sbjct: 107 EEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLK 166
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVR-AGKYEEALEIFSKMQEAGVQPDKAACNIL 212
A Y++M + G+PP + VL++ + +G ++A+ +F M G +PD L
Sbjct: 167 SAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTL 226
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPE 271
I C+ F+ E LL ++ + SP
Sbjct: 227 INGLCR--------------------------------FRSIVEAKELLQEMETKGCSPS 254
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
++ T+ I G L + N+ LL + DK+I+ + S++
Sbjct: 255 VVT-------YTSIIHG-----------LCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSL 296
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ C A E ++ L +Y L+ L + EI + M G
Sbjct: 297 MDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGF 356
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC------------TATYTALIGVYF 439
L +++ L R AA + L E C T+ +I
Sbjct: 357 KPDAGLYGKIVNCLCDVSRFQEAA---NFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLC 413
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+ ++++A ++Y ++ +GI ++ TFN LL
Sbjct: 414 TINNSNRAFQLYLSVLTRGISITVDTFNSLL 444
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 191/520 (36%), Gaps = 123/520 (23%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V V+K KA FN V + GF H TY M++ G +M+ E++ E
Sbjct: 10 VAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAME---EVLAET 66
Query: 96 GINID----AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+NID Y M G + AV+++E M C P++ SY A M IL
Sbjct: 67 RMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRY 126
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR---------------------------- 183
+A VY M +G+ P+ YT+T+ M+ R
Sbjct: 127 FDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCT 186
Query: 184 --AGKYE-----EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL-----RY 231
G YE EA E+F +M G+ PD A N LI C+ G + +L R
Sbjct: 187 VIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRG 246
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+ N + +F + + +E LL V +P+ I+ N
Sbjct: 247 VSPNLFTVN--IFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNT-------------- 290
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC--------DHRRRDG 343
L+ L K +V + L ++++ + D ++II+ C D RDG
Sbjct: 291 ----LICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A F + + Y +LI L + + + E + G + L L+
Sbjct: 347 AFKGFV--------PDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVK 398
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
L G +ALK+ M G P +
Sbjct: 399 GLS---------------------------------QQGLILQALKLMNEMSENGCSPDI 425
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
T+N+++ GL K+G VSDA+ ++ DA++K +P
Sbjct: 426 WTYNLVINGLCKIGCVSDAD-------NLVIDAIAKGHLP 458
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 168/423 (39%), Gaps = 31/423 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +++I E + V+ M++KGI D T+T M A + M
Sbjct: 113 SYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNM 172
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C + V+Y + + + EA ++++EM+ G+ P+ + L+ L R G
Sbjct: 173 PSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHV 232
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--ALRYPVFK 245
+E+ + +K+ + GV P+ NI I+ C+ I +L + + Y
Sbjct: 233 QESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLI 292
Query: 246 EAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
L + FKV + L V+ + P+ + N ID L +++
Sbjct: 293 CGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI-------------IDGYCKLGMMQNA 339
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + D G + D + ++I C D A+ F +++ L
Sbjct: 340 DQILRDGAFKGFVP-----DESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCN 394
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL------GSARRPVPAAKIF 418
L+ L + + +++ EM++ G S ++ L+I+ L A V A
Sbjct: 395 TLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAK 454
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
LP+ T+ LI Y D A++I M G+ P + T+N +L GL K G+
Sbjct: 455 GHLPD----VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGK 510
Query: 479 VSD 481
D
Sbjct: 511 YED 513
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 161/425 (37%), Gaps = 85/425 (20%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF D TY ++++ + I VF EKG+ + V +++ LS G +
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQ 408
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + EM C P I +Y + L V +A ++ + I +G P+ +T+ L++
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ K + A+EI +M GV PD N ++ CKAG+
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGK------------------ 510
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+++ + TFK+ E + P I+ N +T +++ L
Sbjct: 511 ----YEDVMGTFKLMMEKGCV---------PNIITYN----ILTESFCKARKVEEAL--- 550
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+L+ + +K + D T+++ CD+ DGA F+
Sbjct: 551 -----------NLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKR--------- 590
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
V+E K H++ Y ++I+ A K+F+
Sbjct: 591 -----------------------VDEQYKFSHTIATY--NIMINAFAGKLNMNMAEKLFN 625
Query: 420 LLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E+ + TY +I + G+ + KG+ PSL TF +L L
Sbjct: 626 KMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKR 685
Query: 478 RVSDA 482
RV +A
Sbjct: 686 RVHEA 690
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 121/305 (39%), Gaps = 48/305 (15%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D FT+ T++D + + ++ + + + M G++ D +TY S+++ L AG +
Sbjct: 453 AKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYE 512
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ ++ M K C P I++Y + +V+EA ++ +EM +GL P+ + LM
Sbjct: 513 DVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLM 572
Query: 179 EYLVRAGKYEEALE------------------------------------IFSKMQEAGV 202
+ G + A + +F+KM E G
Sbjct: 573 KGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGF 632
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADEND 258
PD ++I+ CK G + L E L F L +V +
Sbjct: 633 SPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVG 692
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGI 316
+ VH PE + N E ++ P + + L+KK ++ A + L GI
Sbjct: 693 IIHLMVHKGIVPEVV--NTIFEADKKEVAAPKIVVEN----LMKKGHITYFAYEILHDGI 746
Query: 317 MDKSI 321
DK +
Sbjct: 747 RDKKL 751
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 55/124 (44%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A+ F V F+H TY M++ F ++ + +F M E G + D+ TY
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYR 640
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ G+++ + K P++ ++ + L L RV EA + M+ +
Sbjct: 641 VMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHK 700
Query: 166 GLPP 169
G+ P
Sbjct: 701 GIVP 704
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 182/425 (42%), Gaps = 62/425 (14%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY++++ EA I V++ + E + +DAVT+ ++++ AG + + +W
Sbjct: 291 DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELW 350
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M + C T+VSY +K LF N +V+EA +++ + ++G P TY VL+ L +
Sbjct: 351 MVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKN 409
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR---- 240
G+ +AL+IF + ++ + D A + +++ CK G I I+ M + L
Sbjct: 410 GRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC 469
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
P+ ++ K+ D + SP +S N T I+G L
Sbjct: 470 NPLINGFVRASKLEDAINFFREMECKGCSPTIVSYN-------TLIKG-----------L 511
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K + S + +++K + D S +++ C ++ ++M LNL +
Sbjct: 512 CKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKK-----------IEMALNLWQ 560
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
A G + + +L+H L S + A +++S
Sbjct: 561 QAL------------------------DKGFKPDITMYNILMHGLCSVCKLEDALQLYSH 596
Query: 421 LPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ C T L+ + +KA +I+ + + G+HP + ++N+ + GL
Sbjct: 597 MKR-STCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCS 655
Query: 478 RVSDA 482
R+SDA
Sbjct: 656 RISDA 660
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 108/503 (21%), Positives = 206/503 (40%), Gaps = 36/503 (7%)
Query: 3 DTISNVYKILKYSTWDSAQDL---LKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWV 56
+T+ N + ++ + WD A+ +++ + + T N ++K +EKA +W+
Sbjct: 120 NTLLNAF--VELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWM 177
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
S+ D F+Y T+++ + + VF+ M +G+ D Y ++ GD
Sbjct: 178 -WSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGD 236
Query: 117 VDGAVNIWEEMKLKEC--YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
D IWE + +K+C YP +V+Y + L R E+ ++++ M + + +TY
Sbjct: 237 YDKGKEIWERL-VKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTY 295
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-K 233
+ L+ L AG + A+ ++ ++ E+ + D N ++ C+AG+ + + M K
Sbjct: 296 SSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGK 355
Query: 234 EN-RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
EN + + Y + + L +E S +W E + P S
Sbjct: 356 ENCQTVVSYNILIKGLFENGKVEEAIS-IW-----------------ELLCKKGCRPEST 397
Query: 293 DQG-LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
G L+ L K L + D +LD+ S++++ C R D A+
Sbjct: 398 TYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQM 457
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
K L+ LI ++ + EM G S + LI L A R
Sbjct: 458 DKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERF 517
Query: 412 VPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A + E + T + L+ + AL +++ KG P + +N+L
Sbjct: 518 SEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNIL 577
Query: 470 LAGLEKLGRVSDA-EIYRKEKKS 491
+ GL + ++ DA ++Y K+S
Sbjct: 578 MHGLCSVCKLEDALQLYSHMKRS 600
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 186/450 (41%), Gaps = 59/450 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ I + ++I + + M + + D +Y ++++ + GD+ GA+ +++EM
Sbjct: 153 TYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEM 212
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGK 186
++ + Y + F + + ++++ +++ + PN TY +++ L + G+
Sbjct: 213 SVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGR 272
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++E+LEI+ +M + + D + LI C+AG + + + + E+ L +
Sbjct: 273 FDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNA 332
Query: 247 ALQTFKVADE-NDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
L F A + +S LW V + + V+ +I L+ L +
Sbjct: 333 MLNGFCRAGKIKESFELWMV--------MGKENCQTVVSYNI---------LIKGLFENG 375
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ S+ + K + +S +I C + R + AL F+ + L+ AY
Sbjct: 376 KVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYS 435
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
+++ L K + IV +M K G+ L ++
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHV--------------------------- 468
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
LI + A + A+ ++ M KG P++ ++N L+ GL K R S+A
Sbjct: 469 ------CNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYS 522
Query: 485 YRKE------KKSIQADALSKDAVPMEEKI 508
+ KE K + +L D + E+KI
Sbjct: 523 FVKEMLEKEWKPDMITCSLLMDGLCQEKKI 552
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A FF + +G + +Y T++ +A+R S + M EK D +T +
Sbjct: 482 LEDAINFFREM-ECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCS 540
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+M L ++ A+N+W++ K P I Y M L ++++A +Y M +
Sbjct: 541 LLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRS 600
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN T LME L + YE+A EI+ + + G+ PD + NI I+ C
Sbjct: 601 TCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDA 660
Query: 226 ILIL 229
I L
Sbjct: 661 IEFL 664
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 73/149 (48%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T + ++D + K+I +++ +KG D Y +MH L + ++ A+ ++
Sbjct: 535 DMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLY 594
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
MK C P +V+ M+ L+ ++A++++ +++ GL P+ +Y + ++ L
Sbjct: 595 SHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSC 654
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILI 213
+ +A+E + G+ P NIL+
Sbjct: 655 SRISDAIEFLNDALNRGILPTAVTWNILV 683
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 53/123 (43%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF D Y ++ ++ ++ M+ + VT ++M L D +
Sbjct: 565 KGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEK 624
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A IW+ + +P I+SY +K L R+ +A + + + RG+ P T+ +L+
Sbjct: 625 ASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVR 684
Query: 180 YLV 182
V
Sbjct: 685 AAV 687
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 183/468 (39%), Gaps = 40/468 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FF + ++RG TY +L +FG+A + V + M++ G DAVTY
Sbjct: 176 LDQAVAFFEDL-KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYN 234
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ + AG + A + M K P +Y M RV EA ++ M +
Sbjct: 235 ELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKN 294
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY ++ L + ++ LE+ +M +G P++ N ++ C K G +
Sbjct: 295 GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 354
Query: 226 ILILRYMKE----------NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
+L MK N L Y FK+ DE + F+P +
Sbjct: 355 TRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDE------MISSGFTPCLTTY 408
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKK-------------------KNLVAIDSLLSGI 316
N + ++ +G S Q +V +LK N I+S+ +
Sbjct: 409 NALLNVLSR--QGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEV 466
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+I ++ T++ N RR +G AF+ + + +++ + K +
Sbjct: 467 YVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLY 526
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTAL 434
K E+ + + ++G S + L+ + A KI L Q +Y +
Sbjct: 527 SKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 586
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I + G +A +I M G+ P + T++ L+ G L ++A
Sbjct: 587 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEA 634
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/537 (21%), Positives = 208/537 (38%), Gaps = 72/537 (13%)
Query: 18 DSAQDLLKNLPIKWDSY-------TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D DLL +P+ S TV L E+A F + R +G TY
Sbjct: 70 DVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRR-QGVVPTIVTYN 128
Query: 71 TMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+LD++G R + + E M+ G+ D T ++V+ G +D AV +E++K
Sbjct: 129 VVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA 188
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ P +V+Y A +++ EA V KEM G P+ TY L RAG +EE
Sbjct: 189 RGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEE 248
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A + M G+ P+ N ++ G + + MK+N + +
Sbjct: 249 AAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG-------YVPNVN 301
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA- 308
T+ +L++ + + S F + + +E ++ P + +L + K+ +
Sbjct: 302 TY-------NLIFGMLGKKS-RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDY 353
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ +L+G+ ++L +T+I R A ++ + T Y AL+
Sbjct: 354 VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLN 413
Query: 369 ILIKLNTFPKVAEIVEEM-------------------TKAGHSLG-------VYLGALL- 401
+L + + IV +M K G++ G VY+G +
Sbjct: 414 VLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFP 473
Query: 402 --------------IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
RL + K P+ + +++ +Y G KA
Sbjct: 474 SWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPD----LVIFNSMLAMYAKNGLYSKA 529
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS--IQADALSKDAV 502
+++ ++ + G+ P L T+N L+ K +AE K+ KS ++ D +S + V
Sbjct: 530 TEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 586
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++G+ D + +ML ++ + S +F+ +++ G++ D +TY S+M + + +
Sbjct: 502 KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNES 561
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A I +++K + P +VSY + +KEA + EMI G+ P TY L
Sbjct: 562 WEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTL 621
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ + EA E+ + M ++P + +++ CKA
Sbjct: 622 VGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKA 663
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA F+ + +S G + D TY +++D++ ++ + + + ++ + D V+Y +V
Sbjct: 528 KATEMFDSIKQS-GLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 586
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
++ G + A I EM P +V+Y + + EA +V MI L
Sbjct: 587 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNL 646
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
P TY +++ +A +Y+EA E S++ +
Sbjct: 647 KPMELTYRRVVDSYCKAKRYDEAREFLSEISD 678
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 169/432 (39%), Gaps = 72/432 (16%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++D + R S ++ MQEKGI D TY ++ ++G A + +EM
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++ P +V+Y+A + + EA ++Y EM+ RG+ PN TY +++ + + +
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLD 371
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A +F M G PD N LI+ C A +L M E L + +
Sbjct: 372 AAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431
Query: 249 QTFK-VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
F V D N +L S + IS V DI V
Sbjct: 432 HGFCLVGDLNAAL------DLSQQMISSG-----VCPDI--------------------V 460
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE--YSVKMDLNLER----- 360
++LL G+ CD+ + AL F+ KMDL+ R
Sbjct: 461 TCNTLLDGL-------------------CDNGKLKDALEMFKAMQKSKMDLDASRPFNGV 501
Query: 361 ----TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y LI LI F + E+ +EM G + +I+ L R A +
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561
Query: 417 IF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+F S P+ T+ L+ Y AG D L+++ M R+GI T+ L+
Sbjct: 562 MFDSMGSKSFSPD----VVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLI 617
Query: 471 AGLEKLGRVSDA 482
G K+G ++ A
Sbjct: 618 HGFRKVGNINGA 629
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 190/454 (41%), Gaps = 31/454 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ + RSR + ++ + +R + +++ M+ K I D ++
Sbjct: 58 LEDAIDLFSDMVRSRPL-PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFN 116
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + + A++ + ++ P +V+++ + L + DRV EA D++ +M +
Sbjct: 117 ILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR- 175
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN T+T LM L R G+ EA+ + +M E G+QP++ +++ CK G+T +
Sbjct: 176 ---PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSA 232
Query: 226 ILILRYMKE-----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE 280
+ +LR M+E + + + + + +D ++ P+ + N ++
Sbjct: 233 LNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMID 292
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+ G S Q L+ +L++K I + S +I R+
Sbjct: 293 GFCS--SGRWSEAQRLLQEMLERK----------------INPNVVTYSALINAYVKERK 334
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
A ++ + + Y ++I K N + M G S V+
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKG 458
LI A+R ++ + E T TY LI + G + AL + + M G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
+ P + T N LL GL G++ DA E+++ +KS
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 488
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 144/341 (42%), Gaps = 23/341 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N + TY+ +++ + + ++ + +++ M +GI + +TY S++ +D
Sbjct: 313 RKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDA 372
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ M K C P + ++ + R+ + T++ EM + GL + TY L+
Sbjct: 373 AEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIH 432
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G AL++ +M +GV PD CN L++ C G+ + + + + M+++++ L
Sbjct: 433 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 492
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV-- 297
+A + F + + Q + I++ +E E P +G+V
Sbjct: 493 ------DASRPFNGVEPD----VQTYNILISGLINEGKFLEAEELYKEMP---HRGIVPN 539
Query: 298 ------LI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
+I L K+ L + + KS D +T++ C R D L F
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFC 599
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ + + Y+ LI K+ +I +EM +G
Sbjct: 600 EMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG 640
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 20/223 (8%)
Query: 17 WDSAQDLLK-------NLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
W AQ LL+ N + S +N +K E L+ + R G + TY
Sbjct: 300 WSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR--GIIPNTITY 357
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+M+D F + R+ + +++F +M KG + D T+ +++ A +D + EM
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+Y + L + A D+ ++MI G+ P+ T L++ L GK ++
Sbjct: 418 TGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 477
Query: 190 ALEIFSKMQEA-----------GVQPDKAACNILIEKCCKAGE 221
ALE+F MQ++ GV+PD NILI G+
Sbjct: 478 ALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGK 520
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
D+ + L+ M+K+ + + G D TY ++ + + +++
Sbjct: 471 DNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKE 530
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +GI + +TY+S+++ L +D A +++ M K P +V++ + R
Sbjct: 531 MPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGR 590
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
V + +++ EM +RG+ + TY L+ + G AL+IF +M +GV PD
Sbjct: 591 VDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPD 644
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 20 AQDLLKNLP--------IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
A++L K +P I + S +N + K E +F + S+S F+ D T+ T
Sbjct: 524 AEELYKEMPHRGIVPNTITYSSM-INGLCKQSRLDEATQMFDSMGSKS--FSPDVVTFNT 580
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + +A R+ +F M +GI DA+TY +++H G+++GA++I++EM
Sbjct: 581 LVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG 640
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
YP ++ + + +L+ + +K A + +++
Sbjct: 641 VYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 64/139 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY++M++ + R+ +F+ M K + D VT+ +++ AG VD
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y + + A D+++EMI G+ P+ T ++
Sbjct: 594 GLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLT 653
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + + A+ + +Q
Sbjct: 654 VLWSKEELKRAVAMLEDLQ 672
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 213/490 (43%), Gaps = 58/490 (11%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA FN + SRGF D +Y ++L F + +K ++E M + G D +TY ++
Sbjct: 379 KAEQLFNDLE-SRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTM 437
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H G + A+ ++ +M+ P V+YT + L +++ EA V EM+ G+
Sbjct: 438 IHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGV 497
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P TY+ L+ +AGK EA E F M +G++PD A +++++ + E + +
Sbjct: 498 KPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMT 557
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-----FSPEFISD------- 275
+ + M + + L + +++ L+T + ++ + + + + + IS
Sbjct: 558 LYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQTISSILVKGEC 617
Query: 276 -NDAVEFVTTDIEGPLSIDQ-----GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
++A + + I ID+ L ++ A+D LL + + S + +
Sbjct: 618 YDEAAKMLRRAISDHFEIDRENLLSILSSYSSSGRHAEALD-LLEFLKEHSPRSSQMITE 676
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++ + C ++ D AL + + ++ T + +LI ++ + +++ +M
Sbjct: 677 ALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFC 736
Query: 390 G--HSLGVYLGALLIH-RLG---SARRPVPAAKIFSLLPED------------------- 424
G S +Y +L++ ++G +A + A+ +L +
Sbjct: 737 GIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQK 796
Query: 425 ---------QKCTA----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
Q+C + ALI Y ++G ++A I+ TM R G P++ T N LL
Sbjct: 797 AESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQ 856
Query: 472 GLEKLGRVSD 481
L GR+ +
Sbjct: 857 ALIVDGRLDE 866
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/355 (18%), Positives = 138/355 (38%), Gaps = 26/355 (7%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY--EEALE 192
T+ Y A M + R + ++ M +RG P+ ++ L+ ++AG A+E
Sbjct: 253 TVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIE 312
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF- 251
+ ++++ +G++PD N LI C +A + M+ + + + +
Sbjct: 313 LLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYG 372
Query: 252 --KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
++ + + L + + F P+ +S N L+ ++ N+
Sbjct: 373 RCGLSGKAEQLFNDLESRGFFPDAVSYN------------------SLLYAFAREGNVEK 414
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ + ++ D +T+I + + + AL + N + Y LI
Sbjct: 415 VKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLID 474
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
L K N + A ++ EM G + + LI A +PV A + F + +
Sbjct: 475 SLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRP 534
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
Y+ ++ ++ +A+ +YK M GI + ++L L K+ +V D
Sbjct: 535 DHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVED 589
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV--DGAVNIWEE 126
Y M+ ++ R + ++ + +LM+E+G D V++ ++++ AG + + A+ + E
Sbjct: 257 YNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNE 316
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
++ P ++Y + ++EA V+ +M P+ +TY ++ R G
Sbjct: 317 VRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGL 376
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+A ++F+ ++ G PD + N L+ + G +
Sbjct: 377 SGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKV 415
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 32 DSYTVNQVL--KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D+Y V+ + H P E L R G TY +++ FG+ + + + +F
Sbjct: 989 DTYNTLIVMYCRDHRPEEGFSLMHEM--RVAGLEPKLDTYKSLVASFGKQQLVEQAEELF 1046
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
E +Q KG +D Y ++M N+G A ++ MK PTI + M +
Sbjct: 1047 EELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSS 1106
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ +EA V + + G + Y+ +++ +R G Y ++ +M++ G++PD
Sbjct: 1107 GQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIW 1166
Query: 210 NILIEKCCKAGETRTIILILRYMKE 234
I + T I++L +++
Sbjct: 1167 TCFIRAASLSRRTSEAIVLLNALQD 1191
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 103/241 (42%), Gaps = 7/241 (2%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYT 70
W A+ + NL I D N +++ + E+A FN + R G + T
Sbjct: 794 WQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRD-GPSPTVDTIN 852
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L R+ + V + +Q+ G I + ++ + AG++ I+ MK
Sbjct: 853 GLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAA 912
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+PT+ Y ++L +V++ + EM + G P+ + +++ V + +
Sbjct: 913 GYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKT 972
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++++ +++E G++PD+ N LI C+ ++ M+ L + +K + +
Sbjct: 973 IQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVAS 1032
Query: 251 F 251
F
Sbjct: 1033 F 1033
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 84/174 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D + ++L ++ + V++ ++E G+ D TY +++ +
Sbjct: 948 GFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEG 1007
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM++ P + +Y + + V++A ++++E+ +G + Y +M+
Sbjct: 1008 FSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKI 1067
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+G + +A +FS M++AGV+P A ++L+ +G+ + +L +KE
Sbjct: 1068 YRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKE 1121
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y M + K++ ++ + M+E G D + SV+ D + +++ +K
Sbjct: 921 YRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIK 980
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +Y + + + R +E + EM GL P TY L+ + E
Sbjct: 981 EDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVE 1040
Query: 189 EALEIFSKMQEAGVQPDKA 207
+A E+F ++Q G + D++
Sbjct: 1041 QAEELFEELQSKGCKLDRS 1059
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY T++ ++ R + M+ G+ TY S++ V+ A
Sbjct: 983 GLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQA 1042
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++EE++ K C Y MKI + +A ++ M G+ P T +LM
Sbjct: 1043 EELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVS 1102
Query: 181 LVRAGKYEEALEIFSKMQEAG 201
+G+ +EA ++ S ++E G
Sbjct: 1103 YGSSGQPQEAEKVLSNLKETG 1123
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+Y +L+ + KV EI EEM K G +IH G + A +++ +
Sbjct: 398 SYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDM 457
Query: 422 PEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ TYT LI +A + M G+ P+L T++ L+ G K G+
Sbjct: 458 QSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKP 517
Query: 480 SDAE 483
+AE
Sbjct: 518 VEAE 521
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 176/424 (41%), Gaps = 65/424 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++Y M+ F +A +I S VF+ M+ +G + D VTY ++ L + G ++ A +
Sbjct: 130 DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVM 189
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+E+ C P++++YT ++ L R+ EA +++ E++ RGL P+ YTY ++ + +
Sbjct: 190 DELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKE 249
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G + AL+ + G PD + NIL+ R+ + R+ RL
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILL---------RSFLNKSRWEDGERLM------ 294
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
D +L P VT I L+ ++
Sbjct: 295 ------------KDMVLSGCEPN-------------VVTHSI---------LISSFCREG 320
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM--DLNL-ERT 361
+ ++L + +K + DS +I C R D LA EY KM D L +
Sbjct: 321 RVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLD---LAIEYLEKMVSDGCLPDIV 377
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y ++ L K ++ E++ + G V + L S + A ++ S +
Sbjct: 378 NYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEM 437
Query: 422 ------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
P++ TY +LI G D+A+ + M P++ +FN++L G+ K
Sbjct: 438 IRKGIDPDE----ITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCK 493
Query: 476 LGRV 479
RV
Sbjct: 494 AHRV 497
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 179/432 (41%), Gaps = 48/432 (11%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
L+F S+GF D T ++ F ++ + V E+++ G + D +Y +++
Sbjct: 82 LYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISG 140
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
S A +D A +++ M+ + P +V+Y + L +++ A +V E+++ G P+
Sbjct: 141 FSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPS 200
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TYT+L+E + G+ EALE+F ++ G++PD N +I CK G + +R
Sbjct: 201 VITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVR 260
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
++ + L++F W+ + + + VT I
Sbjct: 261 HLSARGCNPDVVSYNILLRSFLNKSR-----WEDGERLMKDMVLSGCEPNVVTHSI---- 311
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
L+ ++ + ++L + +K + DS +I C R D LA EY
Sbjct: 312 -----LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLD---LAIEY 363
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
LE+ + ++ NT I+ + K G + L + +L
Sbjct: 364 -------LEKMVSDGCLPDIVNYNT------ILATLCKFGCA---DLALDVFEKLDEVGC 407
Query: 411 PVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
P P + Y + +S G+ KAL++ M RKGI P T+N L+
Sbjct: 408 P-PTVR-------------AYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLI 453
Query: 471 AGLEKLGRVSDA 482
+ L + G V +A
Sbjct: 454 SCLCRDGLVDEA 465
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V + +G D ++Y ++ F + R+ E M G D V Y +++ L G
Sbjct: 331 VMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFG 390
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D A++++E++ C PT+ +Y L+ +A ++ EMI++G+ P+ TY
Sbjct: 391 CADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYN 450
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L+ L R G +EA+ + M+ QP + NI++ CKA
Sbjct: 451 SLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKA 494
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 74/135 (54%), Gaps = 2/135 (1%)
Query: 69 YTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y TM ++ +I +++ + E+++ KGI+ D +TY S++ L G VD A+ + +M
Sbjct: 414 YNTMFSALWSCGNKIKALEMISEMIR-KGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ PT++S+ + + RV E ++ M+++G PN +Y +L+E + AG
Sbjct: 473 EATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWR 532
Query: 188 EEALEIFSKMQEAGV 202
EA+E+ + + GV
Sbjct: 533 AEAMELANSLYRLGV 547
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 188/454 (41%), Gaps = 39/454 (8%)
Query: 52 FFNWVSRSRGFN---------------HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG 96
FF+ ++R++ FN H+ +T M++ F + V + + G
Sbjct: 94 FFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
D T+ ++++ L G V AV + + M C P +V+Y + + + + A
Sbjct: 154 YEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAF 213
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
D+ ++M +R + + +TY+ +++ L R G + A+ +F +M+ G++ N L+
Sbjct: 214 DMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEF 272
CKAG+ L+L+ M + F L F K+ + N+ + SP
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
I+ N ++ G + + L +++L ++ D +++I
Sbjct: 334 ITYNTLMD--------------GYCM----QNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C +R D + F K L Y L+ + E+ +EM G
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAGSADKALKI 450
V +L+ L + A +IF L + + YT +I G + A +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ ++ KG+ P++ T+ V+++GL K G +S+A I
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 196/462 (42%), Gaps = 63/462 (13%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++++ + S + M+E+ + D TY++++ L G +D A
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++++EM+ K ++V+Y + ++ L + + + K+M+ R + PN T+ VL++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
V+ GK +EA E++ +M G+ P+ N L++ Y +NRL
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDG---------------YCMQNRL--- 349
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL---SIDQGL- 296
++ N+ L V + SP+ ++ T+ I+G +D G+
Sbjct: 350 -------------SEANNMLDLMVRNKCSPDIVT-------FTSLIKGYCMVKRVDDGMK 389
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
V + K+ LVA ++ S +++ C + A F+ V +
Sbjct: 390 VFRNISKRGLVA---------------NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y L+ L K EI E++ K+ LG+ + +I + + A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+F LP + TYT +I GS +A + + M G P+ T+N L+
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
+ G ++ + +E KS S DA ++ I D+L G+
Sbjct: 555 RDGDLTASAKLIEEMKSC---GFSADASSIKMVI-DMLLSGE 592
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F +S+ RG + TY+ ++ F ++ +I + +F+ M G+ D +TY ++ L
Sbjct: 391 FRNISK-RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ G ++ A+ I+E+++ + IV YT ++ + +V++A +++ + +G+ PN
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
TYTV++ L + G EA + KM+E G P+ N LI
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 157/390 (40%), Gaps = 60/390 (15%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ +++EM P +V ++ + + + D K++ G+ N YT ++
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ R K A + K+ + G +PD N LI C G+ ++++ M EN
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
P+ ++ N V + + L+ D +
Sbjct: 190 -------------------------------QPDMVTYNSIVNGICRSGDTSLAFD---M 215
Query: 298 LILLKKKNLVA--------IDSLL-SGIMDKSIQL-----DSAVISTIIEVN------CD 337
L ++++N+ A IDSL G +D +I L + S+++ N C
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 338 HRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ DGALL + V ++ + L+ + +K + E+ +EM G S +
Sbjct: 276 AGKWNDGALL-LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKT 453
L+ R A + L+ + KC+ T+T+LI Y D +K+++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ ++G+ + T+++L+ G + G++ AE
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY +LD + ++ +FE +Q+ +++ V YT+++ + G V+
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A N++ + K P +++YT + L + EA + ++M + G PN TY L+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+R G + ++ +M+ G D ++ ++I+
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 177/428 (41%), Gaps = 22/428 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D TYT +++ + K+I + E + G TY ++++ L G ++
Sbjct: 252 TNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 311
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+++ ++ C P +V+YT+ + L R EA ++KEM RGL + YT L+
Sbjct: 312 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALI 371
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L++ GK +A ++ M G PD + +I+ KAG + I + M+ LA
Sbjct: 372 RGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 431
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
V+ + A + D L ++ Q F + + +T +I L+
Sbjct: 432 PNEVVYSALIHGLCKARKMDCAL-EMLAQMKKAFCTPDT----ITYNI---------LID 477
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L K ++ A + +++ + D + +I C D A + D++
Sbjct: 478 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLD-----DMSS 532
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
R Y +L+ L K + EM ++G + L+ H L A R A +F
Sbjct: 533 SRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLF 591
Query: 419 SLL-PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ + E Y ++I +G ++ +Y+ M R P T+N LL G+
Sbjct: 592 NAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWKPDRVTYNALLNGMIGAN 650
Query: 478 RVSDAEIY 485
R+ A Y
Sbjct: 651 RMDRAHYY 658
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 178/456 (39%), Gaps = 29/456 (6%)
Query: 31 WDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
W+ L P E+A+ + G T+ +L ++ ++ + FE
Sbjct: 157 WNVLITGYCLAREP--EEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE 214
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
++ + + + A T++ +++ L AG + A ++ +E C I +YTA + L N
Sbjct: 215 AVR-RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNK 273
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+++EA + +++ G P TY L+ L + G+ EEA+++ K+ + G PD
Sbjct: 274 KIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 333
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVF----KEALQTFKVADENDSLLWQVHP 266
LI+ K + + + M LAL + + LQT K+ +
Sbjct: 334 SLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH 393
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
P+ ++ ++T I+G L K + A + + + + +
Sbjct: 394 GCVPDVVT-------LSTMIDG-----------LSKAGRIGAAVRIFKSMEARGLAPNEV 435
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
V S +I C R+ D AL K + Y LI L K +EM
Sbjct: 436 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 495
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
+AG VY +LI L A A + + + Y++L+ +G +
Sbjct: 496 LEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR---FVYSSLVDGLCKSGKLEG 552
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M R G+ S T L+ L K RV +A
Sbjct: 553 GCMLFHEMERSGVANS-QTRTRLIFHLCKANRVDEA 587
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 152/387 (39%), Gaps = 43/387 (11%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
++ + A + + R +EA ++ K + P+ T+ VL+ A + EEA +
Sbjct: 118 SVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI 177
Query: 195 SKMQEA-GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
+M+E GV P N+++ CK+G+ ++ + + + R ++ PV
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGK---VLAAMDHFEAVRRSM--PVSAATFSILIN 232
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVT-TDIEGPLS----IDQGLVLI--------- 299
++ Q H + E ++ ++ T T I L+ I + + L+
Sbjct: 233 GLVKAGMMIQAH-SLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCT 291
Query: 300 ------------LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
L K L LL I+D D +++I+ +R A
Sbjct: 292 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 351
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F+ L L+ Y ALI L++ P+ + + + MT G V + +I L
Sbjct: 352 FKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 411
Query: 408 ARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
A R A +IF L P + Y+ALI A D AL++ M + P
Sbjct: 412 AGRIGAAVRIFKSMEARGLAPNE----VVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 467
Query: 462 SLGTFNVLLAGLEKLGRVSDAEIYRKE 488
T+N+L+ GL K G V A + E
Sbjct: 468 DTITYNILIDGLCKSGDVEAARAFFDE 494
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 195/477 (40%), Gaps = 30/477 (6%)
Query: 18 DSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR--GFNHDRFTYTTM 72
D A +L +++P ++W+ Y+ ++ + + + ++R + + TY T+
Sbjct: 91 DKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTV 150
Query: 73 LDIFGEAK-RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + + +F M+ +GI D +TY +++ S+ G V+ A ++ M
Sbjct: 151 INACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAG 210
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P ++Y A + I DR + ++ +EM Q G P+ Y +L+E RAGKY A
Sbjct: 211 VVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAA 270
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
++F +MQEAG PD + L+E K G + L+ MKE + +Q F
Sbjct: 271 KMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVF 330
Query: 252 KVA---DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
E+ +L W + + +E +S GL+ K A
Sbjct: 331 GQGGFFQESINLFW-----------------DLLDGGVEPDMSTYAGLLYSCGKGGLHKA 373
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ ++ + + + +I + A AF + + Y ALIG
Sbjct: 374 AKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIG 433
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
+ + M G S V LI G A + FS E+ +C+
Sbjct: 434 AHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIE-FSRDMEEARCS 492
Query: 429 A---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY AL+GVY +AG D+A + + G PS+ ++ +LL+ + R DA
Sbjct: 493 PNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDA 549
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 145/375 (38%), Gaps = 25/375 (6%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
YT ++ + G +D A ++E+M L + + S+TA + N + + + + M
Sbjct: 77 YTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMK 136
Query: 164 QRGLPPNCYTYTVLMEYLVRAG-KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ + PN TY ++ + G ++E L +F++M+ G+QPD N L+ C G
Sbjct: 137 REKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLV 196
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
++ R M E + + + + AD ++ + + E +A + V
Sbjct: 197 EEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGV-----GELLREMEQAGNAPDVV 251
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
+I L+ + A + + + D ST++E H D
Sbjct: 252 AYNI---------LIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYD 302
Query: 343 GALLAF----EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
L F E + D+N Y LI + + F + + ++ G +
Sbjct: 303 EVRLLFTDMKERGTEPDVN----TYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTY 358
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
A L++ G A KI + + T +T LI Y +A +A + +M
Sbjct: 359 AGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKE 418
Query: 457 KGIHPSLGTFNVLLA 471
G P L T+N L+
Sbjct: 419 SGCKPDLETYNALIG 433
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 120/305 (39%), Gaps = 52/305 (17%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN + YT+++ + R G ++A E+F M V+ + + LI + G+ + +
Sbjct: 72 PNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHL 131
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
L MK ++ +P I+ N + +G
Sbjct: 132 LARMKREKV-------------------------------TPNLITYNTVINACA---KG 157
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
L +GL+ L + + + IQ D +T++ + A + F
Sbjct: 158 GLEW-EGLL-------------GLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVF 203
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ + + Y AL+ I + + V E++ EM +AG++ V +LI G A
Sbjct: 204 RTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRA 263
Query: 409 RRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+ AAK+F + E CT T++ L+ Y G D+ ++ M +G P + T
Sbjct: 264 GKYRAAAKMFKQMQE-AGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNT 322
Query: 466 FNVLL 470
+N L+
Sbjct: 323 YNTLI 327
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 78/195 (40%), Gaps = 4/195 (2%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+T ++ +G A S Y F M+E G D TY +++ + G A + + M
Sbjct: 393 FTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMI 452
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ + +Y + ++ +A + ++M + PN +TY LM AG ++
Sbjct: 453 DEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFD 512
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA F +Q G P + +L+ C + +L M E + Y V L
Sbjct: 513 EAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSIYGVVGGIL 572
Query: 249 QTFKVADENDSLLWQ 263
+ + +D WQ
Sbjct: 573 K----GEMDDGTNWQ 583
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 1/147 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
FN + S G D TY ++ + M ++GI+ D TY S++
Sbjct: 413 FNSMKES-GCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFG 471
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G D A+ +M+ C P +Y A M + EA + ++ G P+
Sbjct: 472 RGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVD 531
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQE 199
+Y +L+ R ++++A ++ +M E
Sbjct: 532 SYCLLLSVCARRNRWDDASKVLEEMLE 558
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 207/486 (42%), Gaps = 35/486 (7%)
Query: 29 IKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNH-DRFTYTTMLDIFGEAKRISS 84
+ +D+ TVN VL +++A + R G D + +++D + + + +
Sbjct: 133 VPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMET 192
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
V E M+ +G+ +D V Y S++ L AG+VD A ++ + MK P +V+YT ++
Sbjct: 193 AFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIV 252
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+ V +A +Y+EM+++G+ P+ T + L+ L + G++ EA +F +M++ G P
Sbjct: 253 EYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAP 312
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLAL---RYPVFKEALQTFKVADENDSLL 261
+ +LI+ KA + +L + + + Y + L DE +
Sbjct: 313 NHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMF 372
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
+SDN VT + L+ L K N+ + +LS + +KSI
Sbjct: 373 RHA--------LSDNHTPNGVTYTV---------LIDALCKAGNVDGAEQVLSEMEEKSI 415
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM---DLNLERTAYLALIGILIKLNTFPK 378
+ S+II +R A +Y +M ++ Y +I K
Sbjct: 416 SPNVVTFSSIIN---GLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEA 472
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIG 436
++ EM G + ++ L++ L + A +F + E YT LI
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADA 496
F G+ A K+ + + K + P +NV + L LG+ +AE + +E +Q+
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEE---MQSTG 589
Query: 497 LSKDAV 502
L D V
Sbjct: 590 LKPDQV 595
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 189/440 (42%), Gaps = 32/440 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G ++F ++++ + +I + +F M E+G+ +D V YT+++ L G++ A
Sbjct: 484 GVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAA 543
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +E+ K P V Y ++ L + + KEA +EM GL P+ TY ++
Sbjct: 544 FKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAA 603
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
R GK +AL++ + M+ + ++P+ + LI +AG +L M + +
Sbjct: 604 QSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPT 663
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ LQ +D L+ ++H + + +++ LV +L
Sbjct: 664 SLTHRRVLQACSQGRRSD-LILEIHEW-------------MMNAGLCADITVYNTLVRVL 709
Query: 301 ----LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ +K +V ++ +SG + I D+ + +I + D A ++ + +
Sbjct: 710 CYNGMTRKAMVVLEE-MSG---RGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGI 765
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ + L+G L + ++ EM K G +L+ G V A +
Sbjct: 766 SPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVR 825
Query: 417 IF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
++ LP+ +TY ALI + G +A +++ M +G+ P+ T+++L+
Sbjct: 826 LYCEMVGKGFLPK----VSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILV 881
Query: 471 AGLEKLGRVSDAEIYRKEKK 490
+G KL ++ + K+ K
Sbjct: 882 SGWSKLRNGTEVRKFLKDMK 901
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 169/445 (37%), Gaps = 84/445 (18%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG + + TY T++D + + V+ M +G+ ++ S+++ L G +
Sbjct: 446 KERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKI 505
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++ EM + V+YT + LF + A V +E+ ++ L P+ Y V
Sbjct: 506 EKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVF 565
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L GK +EA +MQ G++PD+ N +I + G+T + +L MK + +
Sbjct: 566 INCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSI 625
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
K L T+ L+
Sbjct: 626 -------KPNLITYST------------------------------------------LI 636
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ L + + LL+ + S +++ RR D L E+ + L
Sbjct: 637 VGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLC 696
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ T Y L+ +L K ++EEM S R P
Sbjct: 697 ADITVYNTLVRVLCYNGMTRKAMVVLEEM--------------------SGRGIAPDTIT 736
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
F+ L ++G +F +G D A Y M GI P++ TFN LL GLE G
Sbjct: 737 FNAL------------ILG-HFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAG 783
Query: 478 RVSDAEIYRKE--KKSIQADALSKD 500
R+ ++++ E K+ I+ L+ D
Sbjct: 784 RIGESDMVLNEMKKRGIEPSNLTYD 808
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA N +S S GF+ T+ +L + +R + + E M G+ D Y
Sbjct: 645 VEKAKYLLNEMSSS-GFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYN 703
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L G A+ + EEM + P +++ A + F + + A Y +M+
Sbjct: 704 TLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYH 763
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G+ PN T+ L+ L AG+ E+ + ++M++ G++P +IL+
Sbjct: 764 GISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILV 811
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ +VL + KA + +S RG D T+ ++ ++ + + ++ M
Sbjct: 704 TLVRVLCYNGMTRKAMVVLEEMS-GRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLY 762
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY----TAYMKILFLND 150
GI+ + T+ +++ L +AG + + + EMK + P+ ++Y T Y K ++
Sbjct: 763 HGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGK---QSN 819
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+V EA +Y EM+ +G P TY L+ + G +A E+F++MQ GV P +
Sbjct: 820 KV-EAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYD 878
Query: 211 ILIEKCCKAGETRTIILILRYMKE 234
IL+ K + L+ MKE
Sbjct: 879 ILVSGWSKLRNGTEVRKFLKDMKE 902
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + T+ T+L A RI V M+++GI +TY ++ + A
Sbjct: 764 GISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEA 823
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++ EM K P + +Y A + + +A +++ EM RG+ P TY +L+
Sbjct: 824 VRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSG 883
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ E + M+E G P K + + K G
Sbjct: 884 WSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPG 923
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 4/208 (1%)
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
++ +V+ ++ +A ++LL+ + + + D+ ++T++ C R D A E
Sbjct: 103 TVSYNVVMSGFSEQGGLAPEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEV 162
Query: 351 SVKMDL--NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
V+ L+ + +L+ K+ + E M G + V L+ L A
Sbjct: 163 MVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRA 222
Query: 409 RRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A + + D + TYT I Y + D A +Y+ M RKG+ P + T
Sbjct: 223 GEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTL 282
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
+ L+ GL K GR S+A +E + I A
Sbjct: 283 SALVGGLCKDGRFSEAYALFREMEKIGA 310
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 181/453 (39%), Gaps = 70/453 (15%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N L+ ME+A LF N + T M+D +A+++ +FE M +K
Sbjct: 420 LNAALEIRDDMERAGLFPNVL-----------TVNIMIDRLCKAQKLEEACSIFEGMDDK 468
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
+AVT++S++ L G VD A +++E+M P + YT+ ++ F R ++
Sbjct: 469 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 528
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+YKEM+ G P+ M+ + +AG+ E+ +F ++ G PD + +ILI
Sbjct: 529 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDS--LLWQVHPQFSPEF 272
KAG + MKE L + + F K N + LL ++ + P
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHP-- 646
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
P + G V+ L ID L
Sbjct: 647 ----------------PTVVTYGSVI-----DGLAKIDRL-------------------- 665
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
D A + FE + + L Y +LI K+ + I+EE+ + G +
Sbjct: 666 ---------DEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 716
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALK 449
VY L+ L A A F + +D KC TY+ LI +KA
Sbjct: 717 PNVYTWNCLLDALVKAEEINEALICFQSM-KDLKCPPNQITYSILINGLCRVRKFNKAFV 775
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M + G+ P+ T+ +++GL K G + +A
Sbjct: 776 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEA 808
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 188/468 (40%), Gaps = 52/468 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ + +TT++ +F R+ + + + M+ ++ D V Y + AG VD +
Sbjct: 225 GYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMS 284
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EMK P V+YT+ + +L +R+ EA ++++++ Q P Y Y ++
Sbjct: 285 WKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMG 344
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
AGK++EA + + + G P A N ++ K + I MK + +
Sbjct: 345 YGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-N 403
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
P + + D L + + E D + + + ID+ L
Sbjct: 404 VPTYNILI---------DMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDR-----L 449
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K + L S+ G+ DK ++ S++I+ R D A +E +
Sbjct: 450 CKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA 509
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHS-----LGVYLGALL----------IHRL 405
Y +LI K +I +EM G S + Y+ + + R
Sbjct: 510 IVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFRE 569
Query: 406 GSARRPVPAAKIFSLL-------------------PEDQKC---TATYTALIGVYFSAGS 443
+A +P A+ +S+L ++Q C T Y A+I + +G
Sbjct: 570 INAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGK 629
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+KA ++ + M KG P++ T+ ++ GL K+ R+ +A + +E KS
Sbjct: 630 VNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 677
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 18/192 (9%)
Query: 40 LKTHPP-----------------MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI 82
+K HPP +++A++ F ++S G + Y++++D FG+ RI
Sbjct: 642 VKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSNGIKLNVVVYSSLIDGFGKVGRI 700
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+ E + +KG+ + T+ ++ L A +++ A+ ++ MK +C P ++Y+
Sbjct: 701 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL 760
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ L + +A ++EM + GL PN TYT ++ L +AG EA +FS+ + G
Sbjct: 761 INGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGG 820
Query: 203 QPDKAACNILIE 214
PD A+ N +IE
Sbjct: 821 IPDSASYNAMIE 832
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 174/481 (36%), Gaps = 70/481 (14%)
Query: 26 NLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH-DRFTYTTMLDIFGEAKRIS- 83
N + + + Q K H P L ++R+ F+H +R L FG + IS
Sbjct: 106 NTAVNYFQWAEKQTEKVHCPEAYNSLLM-VMARNTEFDHLERILEEMSLSGFGPSSNISI 164
Query: 84 ----------SMKYVFELMQ---EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
++ F+++Q + YT ++ LS + D + ++ +M+
Sbjct: 165 ELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQEL 224
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ +T +++ RV A + EM L + Y V ++ +AGK + +
Sbjct: 225 GYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMS 284
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+ F +M+ G+ PD +I CKA + + +++NR + +
Sbjct: 285 WKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMG 344
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
+ A + D + Q + I P I +L L KK
Sbjct: 345 YGSAGKFDEAYGLLERQKAKGSI---------------PSVIAYNCILTCLGKK------ 383
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
RR + AL FE +K D Y LI +L
Sbjct: 384 ----------------------------RRVEEALRIFE-EMKRDAVPNVPTYNILIDML 414
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT-- 428
+ EI ++M +AG V ++I RL A++ A IF + +D+ CT
Sbjct: 415 CREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM-DDKVCTPN 473
Query: 429 -ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
T+++LI G D A +Y+ M G P + L+ K GR D K
Sbjct: 474 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK 533
Query: 488 E 488
E
Sbjct: 534 E 534
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +T+ +LD +A+ I+ F+ M++ + +TY+ +++ L +
Sbjct: 713 KGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK 772
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A W+EM+ P ++YT + L + EA+ ++ G P+ +Y ++E
Sbjct: 773 AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIE 832
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L A K +A +F + + G C +L++ KA
Sbjct: 833 GLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 872
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
L+ AY A+I K K +++EEM GH V +I L R A +
Sbjct: 612 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYML 671
Query: 418 FSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
F E+ K Y++LI + G D+A I + + +KG+ P++ T+N LL
Sbjct: 672 F----EEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 727
Query: 472 GLEKLGRVSDAEIYRKEKKSIQA 494
L K +++A I + K ++
Sbjct: 728 ALVKAEEINEALICFQSMKDLKC 750
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 190/450 (42%), Gaps = 18/450 (4%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V Q ++ E A FF W + + + H + +++++ + + ++ VF ++++
Sbjct: 120 VLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDR 179
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G+ + S++ N G V+ + +W MK P++ +Y + L + ++ A
Sbjct: 180 GLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESA 239
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
V++ M + P+ TY ++++ +AGK ++A+E F M+ V+PDK LI+
Sbjct: 240 EKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQA 299
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL-LWQVHPQFSPEFIS 274
C + T + + M+E L P +L + + + + V + +
Sbjct: 300 CYSERDFDTCLSLYLEMEER--GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCR 357
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
N ++I L+ K ++ L + ++ + D+ S ++
Sbjct: 358 AN-------------VAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNG 404
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C R D + F++ + + Y +LI L K + EEM++ G +
Sbjct: 405 LCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARD 464
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYK 452
Y +I L + A +F + E+ + T+T LI F ++A+K +
Sbjct: 465 SYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWD 524
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M KGI P++ +F L GL G+V+ A
Sbjct: 525 KMIDKGITPTVASFRALAIGLCLCGKVARA 554
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
DSY+ N ME+A F + ++ GF D TY+ +++ ++ R+ +F+
Sbjct: 368 DSYSKNG------SMEEAMRLFERM-KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF 420
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ KG+ I+A+ Y S++ L AG ++ A N++EEM K C Y A + L + +
Sbjct: 421 CRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGK 480
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ +A ++ M + G YT+T+L++ L + K EEA++ + KM + G+ P A+
Sbjct: 481 IDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRA 540
Query: 212 LIEKCCKAGETRTIILIL 229
L C G+ IL
Sbjct: 541 LAIGLCLCGKVARACKIL 558
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R++G + Y +++D G+A RI + +FE M EKG D+ Y +++ L+ G +
Sbjct: 422 RNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKI 481
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ ++ M+ + C T+ ++T + LF + +EA + +MI +G+ P ++ L
Sbjct: 482 DQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRAL 541
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L GK A +I + G+ P+ A + +I CKA
Sbjct: 542 AIGLCLCGKVARACKILDDLAPMGIIPETAFED-MINTLCKA 582
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 40/207 (19%)
Query: 316 IMDKS-IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+MD I D+ + +I+ C + A+ F ++ ++ Y+ LI
Sbjct: 245 VMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSER 304
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---Y 431
F + EM + G + + +L+I L R+ + A +F + + + C A Y
Sbjct: 305 DFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQ-KGCRANVAIY 363
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL---------------------- 469
TALI Y GS ++A+++++ M +G P T++VL
Sbjct: 364 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN 423
Query: 470 -------------LAGLEKLGRVSDAE 483
+ GL K GR+ DAE
Sbjct: 424 KGVAINAMFYASLIDGLGKAGRIEDAE 450
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 119/280 (42%), Gaps = 22/280 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DRF+Y T++ ++ + V + M ++GI D VT+ S++H L G V A
Sbjct: 214 GVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEA 273
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM + P V+YT + ++EA + EM G+ P TY ++
Sbjct: 274 AQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRK 333
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L GK +E ++ ++M E VQ D CN LI CK G + + + M E+ L L
Sbjct: 334 LCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLN 393
Query: 241 YPVFKEALQTFKVADEND----SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+K + F A E D + V FSP + S+ L
Sbjct: 394 QFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNY------------------SVFSWL 435
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
V KK N A+ + +M + + D AV ++I C
Sbjct: 436 VDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLC 475
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/407 (19%), Positives = 154/407 (37%), Gaps = 57/407 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+RG D T +L A+ ++ + VF+ M G+ + Y +++H AGD
Sbjct: 141 RARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDA 200
Query: 118 DGAVNIWEEMKL------KECYPTI-----------------------------VSYTAY 142
A + M + Y T+ V++ +
Sbjct: 201 ARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSL 260
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ L RVKEA ++ EM P+ TYT L++ RAG EEA+++ +M+ G+
Sbjct: 261 IHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGM 320
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
P A N ++ K C+ G+ + + +L M E ++ + + + S
Sbjct: 321 LPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTS--- 377
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ----GLVLILLKKKNLVAIDSLLSGIMD 318
A + +E L ++Q L+ K K L ++D
Sbjct: 378 ---------------ACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVD 422
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ +V S +++ C D LL + +K L ++ Y +LI L + +
Sbjct: 423 AGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQ 482
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
++ ++M G + A L + + +PV A+ + ++Q
Sbjct: 483 AQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQ 529
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 148/390 (37%), Gaps = 22/390 (5%)
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ ++ R VF+ M+ +G+ DA T+++ L+ A A +++EM
Sbjct: 123 VLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAV 182
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+ Y A + + A + M G+P + ++Y ++ + G EA+ +
Sbjct: 183 STHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVR 242
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+M + G++ D N LI CK G + + M + + + + A
Sbjct: 243 DRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRA 302
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
+ E + +E T + ++ ++ L + + ++ LL+
Sbjct: 303 GNIE------------EAVKLRGEME--ATGMLPGVATYNAILRKLCEDGKMKEVNQLLN 348
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+ ++ +Q D +T+I C A + ++ L L + Y ALI K
Sbjct: 349 EMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAK 408
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRL-----GSARRPVPAAKIFSLLPEDQKCTA 429
+ E +M AG S + + L+ A +P + LP D+ A
Sbjct: 409 ELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDK---A 465
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGI 459
Y +LI G D+A K++ M KG+
Sbjct: 466 VYRSLIRRLCRKGLVDQAQKVFDQMQSKGL 495
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 122/332 (36%), Gaps = 86/332 (25%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P ++ VL+ L ++ + +AL +F +M+ G+ PD AC L+ +A T T +
Sbjct: 114 PRVPSWLVLV--LAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRV 171
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
M LA+ V+ L
Sbjct: 172 FDEMARAGLAVSTHVYNAMLH--------------------------------------- 192
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+ LK + ++L++ + + LD +T+I + C R A+
Sbjct: 193 ----------VCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVR 242
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ K + + + +LI L K + A++ EM A +
Sbjct: 243 DRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQAT---------------- 286
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
P++ TYT LI Y AG+ ++A+K+ M G+ P + T+N
Sbjct: 287 -------------PDN----VTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNA 329
Query: 469 LLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
+L L + G++ + + +++ +QAD ++
Sbjct: 330 ILRKLCEDGKMKEVNQLLNEMDERKVQADHVT 361
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 8/176 (4%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D V S ++ V R AL F+ L + A AL+ L + +
Sbjct: 113 DPRVPSWLVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVF 172
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTALIGVY 438
+EM +AG ++ ++ ++H A A + + + P D+ +Y +I +Y
Sbjct: 173 DEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDR---FSYNTVIALY 229
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
G +A+ + M ++GI T+N L+ GL K GRV +A E + QA
Sbjct: 230 CKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQA 285
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/507 (20%), Positives = 211/507 (41%), Gaps = 60/507 (11%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDS---YTVNQVLKTHPPMEKAWLFFNWVSR--S 59
+S + K+ +Y +D+ L K + + S YT++ ++ +++ L F+ +++
Sbjct: 104 LSAIVKMGQY--YDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIK 161
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G T+TT+++ + + + +F+ M +G D TYT++++ L G+
Sbjct: 162 LGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAA 221
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + ++M+ C P +V+Y+ + + RV EA D++ M +G+ P+ +TY L++
Sbjct: 222 AAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQ 281
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +++EA + ++M+ + PD N+L++ CK G+ +L+ M E
Sbjct: 282 GLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTE----- 336
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
V P D V + S+ G L
Sbjct: 337 ----------------------MGVEP----------DVVTYS--------SLMYGYSL- 355
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ +V L ++ K + D + +I C +R D A F + L
Sbjct: 356 ---RSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPN 412
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+Y LI L +L + + + + M G+ ++ ++L+ A ++F
Sbjct: 413 NVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFR 472
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ + Y LI +G+ A K++ + KG+ P+ + ++ GL K G
Sbjct: 473 AMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEG 532
Query: 478 RVSDA-EIYRK-EKKSIQADALSKDAV 502
+ +A E +R E+ D +S + +
Sbjct: 533 LLDEALEAFRNMEEDGCPPDEISYNVI 559
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D F+Y +++ + + KRI K +F M +G+ + V+Y +++H L G +
Sbjct: 371 TKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR 430
Query: 119 GAVNIWEEMK------------------LKECY-----------------PTIVSYTAYM 143
A N+++ M K+ Y P +V Y +
Sbjct: 431 EARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILI 490
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+ + +++A ++ E+ +GL PN YT ++ L + G +EALE F M+E G
Sbjct: 491 DAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCP 550
Query: 204 PDKAACNILIE 214
PD+ + N++I
Sbjct: 551 PDEISYNVIIR 561
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 183/468 (39%), Gaps = 40/468 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FF + ++RG TY +L +FG+A + V + M++ G DAVTY
Sbjct: 267 LDQAVAFFEDL-KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYN 325
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ + AG + A + M K P +Y M RV EA ++ M +
Sbjct: 326 ELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKN 385
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY ++ L + ++ LE+ +M +G P++ N ++ C K G +
Sbjct: 386 GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 445
Query: 226 ILILRYMKE----------NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
+L MK N L Y FK+ DE + F+P +
Sbjct: 446 TRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDE------MISSGFTPCLTTY 499
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKK-------------------KNLVAIDSLLSGI 316
N + ++ +G S Q +V +LK N I+S+ +
Sbjct: 500 NALLNVLSR--QGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEV 557
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+I ++ T++ N RR +G AF+ + + +++ + K +
Sbjct: 558 YVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLY 617
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTAL 434
K E+ + + ++G S + L+ + A KI L Q +Y +
Sbjct: 618 SKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 677
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I + G +A +I M G+ P + T++ L+ G L ++A
Sbjct: 678 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEA 725
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/537 (21%), Positives = 208/537 (38%), Gaps = 72/537 (13%)
Query: 18 DSAQDLLKNLPIKWDSY-------TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D DLL +P+ S TV L E+A F + R +G TY
Sbjct: 161 DVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRR-QGVVPTIVTYN 219
Query: 71 TMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+LD++G R + + E M+ G+ D T ++V+ G +D AV +E++K
Sbjct: 220 VVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA 279
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ P +V+Y A +++ EA V KEM G P+ TY L RAG +EE
Sbjct: 280 RGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEE 339
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A + M G+ P+ N ++ G + + MK+N + +
Sbjct: 340 AAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG-------YVPNVN 392
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA- 308
T+ +L++ + + S F + + +E ++ P + +L + K+ +
Sbjct: 393 TY-------NLIFGMLGKKS-RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDY 444
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ +L+G+ ++L +T+I R A ++ + T Y AL+
Sbjct: 445 VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLN 504
Query: 369 ILIKLNTFPKVAEIVEEM-------------------TKAGHSLG-------VYLGALL- 401
+L + + IV +M K G++ G VY+G +
Sbjct: 505 VLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFP 564
Query: 402 --------------IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
RL + K P+ + +++ +Y G KA
Sbjct: 565 SWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPD----LVIFNSMLAMYAKNGLYSKA 620
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS--IQADALSKDAV 502
+++ ++ + G+ P L T+N L+ K +AE K+ KS ++ D +S + V
Sbjct: 621 TEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 677
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++G+ D + +ML ++ + S +F+ +++ G++ D +TY S+M + + +
Sbjct: 593 KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNES 652
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A I +++K + P +VSY + +KEA + EMI G+ P TY L
Sbjct: 653 WEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTL 712
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ + EA E+ + M ++P + +++ CKA
Sbjct: 713 VGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKA 754
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA F+ + +S G + D TY +++D++ ++ + + + ++ + D V+Y +V
Sbjct: 619 KATEMFDSIKQS-GLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 677
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
++ G + A I EM P +V+Y + + EA +V MI L
Sbjct: 678 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNL 737
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
P TY +++ +A +Y+EA E S++ +
Sbjct: 738 KPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 89/162 (54%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + +Y TML + A +I+ F M+++ ID +TYT+V+H AG++
Sbjct: 234 RGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKR 293
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ M K P++ +Y A++++L D V A +++EM+ +G PN TY +++
Sbjct: 294 ARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIR 353
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L G+ E A+E +M++ G +P+ N++I C GE
Sbjct: 354 GLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGE 395
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +AW FF + R D TYTT++ FG A I + VF+ M +KG+ TY
Sbjct: 256 INEAWDFF-LEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYN 314
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ + L +VD A+ I+EEM +K P ++Y ++ L ++ A + M
Sbjct: 315 AFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDD 374
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
G PN TY +++ Y G+ ++AL++F KM P+ NILI
Sbjct: 375 GCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILIS 423
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 98/205 (47%), Gaps = 1/205 (0%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRG-FNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
D + N +L ++ + +N +G F D +Y M++ + KR + + +
Sbjct: 170 DLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLK 229
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M ++G+ + +Y +++ AG ++ A + + EMK ++C +++YT + +
Sbjct: 230 EMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAG 289
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+K A V+ M+++G+ P+ TY ++ L + + A+ IF +M G P+ N
Sbjct: 290 EIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYN 349
Query: 211 ILIEKCCKAGETRTIILILRYMKEN 235
++I C GE + + MK++
Sbjct: 350 LVIRGLCHRGEMERAMEFMGRMKDD 374
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 6/249 (2%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRF 67
IL S + L + I+W VN +LK P KA FFN +S ++H
Sbjct: 45 ILTSSNPQALAQTLHSPTIQWTPQLVNTILKRLWNDGP--KALQFFNLLSHHPSYSHHPS 102
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +DI + S++ + M+ + T+ + ++AG AV ++ M
Sbjct: 103 SYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSM 162
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C+ + S+ + +L + RV+ A +++K + + +C +Y V++ +
Sbjct: 163 HQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFK-VFKGKFRADCVSYNVMVNGWCLIKRT 221
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ALE+ +M + G+ P+ + N +++ +AG+ MK+ + +
Sbjct: 222 NKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTV 281
Query: 248 LQTFKVADE 256
+ F VA E
Sbjct: 282 IHGFGVAGE 290
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
GE +R +M+++ M++ G + TY V+ + + G++D A++++++M +C P +
Sbjct: 359 GEMER--AMEFMGR-MKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNL 415
Query: 137 VSYTAYMKILFL---NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
+Y + +F+ +D + A ++ EM+ RG P +T+ ++ L+ G A EI
Sbjct: 416 DTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEI 475
Query: 194 FSKMQEAG 201
G
Sbjct: 476 LRLQSRCG 483
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 129/338 (38%), Gaps = 58/338 (17%)
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
VY+ R L P T+ ++ E AGK A+++F M + G D + N +++ C
Sbjct: 124 VYRMRSAR-LGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLC 182
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
K+ R+ + Y +FK FK D + + V N
Sbjct: 183 KS---------------KRVEMAYNLFK----VFKGKFRADCVSYNVMVNGWCLIKRTNK 223
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG----------------IMDKSI 321
A+E + ++ L+ NL + +++L G + +
Sbjct: 224 ALEMLKEMVKRGLT------------PNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDC 271
Query: 322 QLDSAVISTIIE---VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
++D +T+I V + +R A F+ VK + Y A I +L K +
Sbjct: 272 EIDVITYTTVIHGFGVAGEIKR---ARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDN 328
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALI 435
I EEM G+ L+I L R + A F +D C TY +I
Sbjct: 329 AIVIFEEMVVKGYVPNSITYNLVIRGL-CHRGEMERAMEFMGRMKDDGCEPNVQTYNLVI 387
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ G DKAL +++ M P+L T+N+L++ +
Sbjct: 388 RYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAM 425
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 2/188 (1%)
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+L +L K V + L + + D + ++ C +R + AL + VK L
Sbjct: 177 ILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGL 236
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
T+Y ++ + + + EM K + V +IH G A A K
Sbjct: 237 TPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARK 296
Query: 417 IFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+F + + ATY A I V + D A+ I++ M KG P+ T+N+++ GL
Sbjct: 297 VFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLC 356
Query: 475 KLGRVSDA 482
G + A
Sbjct: 357 HRGEMERA 364
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D +TI++V C +R + A F+ K + +Y ++ + K E++
Sbjct: 170 DLQSFNTILDVLCKSKRVEMAYNLFKV-FKGKFRADCVSYNVMVNGWCLIKRTNKALEML 228
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFS 440
+EM K G + + ++ A + + A F L + + C TYT +I +
Sbjct: 229 KEMVKRGLTPNLTSYNTMLKGYFRAGQ-INEAWDFFLEMKKRDCEIDVITYTTVIHGFGV 287
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
AG +A K++ TM +KG+ PS+ T+N + L K V +A + +E
Sbjct: 288 AGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEE 335
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 191/462 (41%), Gaps = 38/462 (8%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRI----SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+G +D +T M++ F +++ S+M +F+L G + VT+ ++++ L G
Sbjct: 119 KGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKL----GYEPNTVTFNTLLNGLCLEG 174
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
V AV + + M L + P +++ + L L DRV EA D+ M+ G PN +TY
Sbjct: 175 RVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYG 234
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++ + ++G AL++ KM+ ++P I+I+ CK G + M+
Sbjct: 235 PILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK 294
Query: 236 RL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAV------------ 279
+ Y + +F D+ LL + + +P ++ + +
Sbjct: 295 GIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEA 354
Query: 280 -----EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
E +T IE L+ L K L + ++ ++ K D + +I
Sbjct: 355 KDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILING 414
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C ++ D + F + + Y LI + ++ +EM G G
Sbjct: 415 FCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALK 449
+ A+L+ L A +L + KC Y +I +A D A
Sbjct: 475 IMTYAILLDGLCDNGELEEA---LGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWS 531
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRKEKK 490
++ ++ KG+ + ++N++L+GL K +S+A+ ++RK K+
Sbjct: 532 LFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKE 573
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 9/215 (4%)
Query: 14 YSTWDSAQDLLKNLPIK-------WDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
+ WD LL+++ + S ++ ++K E L+ ++R G +
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR--GIEPNT 370
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY +++ KR+ + +LM KG + D TY +++ A VD + ++ +
Sbjct: 371 ITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRK 430
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M L+ V+Y+ ++ + ++ A V++EM+ +G+ P TY +L++ L G+
Sbjct: 431 MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGE 490
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
EEAL I +M + ++ D NI+I C A +
Sbjct: 491 LEEALGILDQMHKCKMELDIGIYNIIIHGMCNANK 525
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G ++FTY +L+ ++ +S + M+ + I VTYT ++ L G +D
Sbjct: 223 ANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLD 282
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A++ + EM+ K + +Y + + R + + ++MI R + PN T++ L+
Sbjct: 283 DALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALI 342
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ LV+ GK EA +++++M G++P+ N LI C
Sbjct: 343 DSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLC 381
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 89/177 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + D +TY +++ F +AK++ +F M +G+ D VTY++++ + +
Sbjct: 398 SKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLI 457
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++EM + +P I++Y + L N ++EA + +M + + + Y +++
Sbjct: 458 VAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIII 517
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ A K ++A +F + GV+ D + NI++ CK + R MKE+
Sbjct: 518 HGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKED 574
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 70/156 (44%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY +LD + + + + M + + +D Y ++H + NA VD
Sbjct: 468 SQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVD 527
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + K I SY + L + EA ++++M + G P+ TY L+
Sbjct: 528 DAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLI 587
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+R ++++ +M+ G D + I+++
Sbjct: 588 RAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMD 623
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 145/390 (37%), Gaps = 51/390 (13%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV +++ M PT++ + +L + + K+M +G+ + YT ++
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ R K A K+ + G +P+ N L+ C G
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEG----------------- 174
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN-------------DAVEFVTT 284
+ F+ + D ++ H P+ I+ N +AV+ +
Sbjct: 175 -----------RVFEAVELVDCMVLSQHV---PDLITLNTIVNGLCLKDRVSEAVDLIAR 220
Query: 285 DIEGPLSIDQ---GLVL-ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+ +Q G +L + K N + LL + + I+ + II+ C R
Sbjct: 221 MMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGR 280
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D AL F + Y +LIG + A+++ +M + V +
Sbjct: 281 LDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSA 340
Query: 401 LIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
LI L + A +++ + + T TY +LI + D+A ++ M KG
Sbjct: 341 LIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKG 400
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
P + T+N+L+ G K +V D ++RK
Sbjct: 401 CDPDIWTYNILINGFCKAKQVDDGMRLFRK 430
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 188/454 (41%), Gaps = 30/454 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A F+ + R RG DR TY+T++ F + R+ + Y+ + M + DAV Y
Sbjct: 175 LDRAVTLFDSL-RCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYN 233
Query: 106 SVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+++ G+ + A+ +WE++ + P + +Y + L KEA DV++ M+
Sbjct: 234 ALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVA 293
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
P+ TY ++ L R+ + A ++S+M + G+ PD N L++ C AG
Sbjct: 294 NNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGE 353
Query: 225 IILILRYMKEN--RLALRYPVFKEALQTFKVADENDSL--LWQVHPQFSPEFISDNDAVE 280
M + R Y + + L + D+ L L + SP D V
Sbjct: 354 AWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSP------DMVT 407
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
F T + GL K+L +L +LD S++I C R
Sbjct: 408 FST--------MIHGLCEKGFANKSL----QILEEARTSGKELDEFSYSSMISGLCKDGR 455
Query: 341 RDGALLAFEYSVKMD-LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
D A+ +E + MD Y ALI + + F + +M + S
Sbjct: 456 LDDAVKLYE-KISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYN 514
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCR 456
LIH L A + + A++ F+ ++ C TY +LI D AL ++ +
Sbjct: 515 TLIHGLCKAEKYLEASR-FTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILD 573
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
KG+ + N+L+ GL G+V +A E K
Sbjct: 574 KGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMK 607
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 184/458 (40%), Gaps = 67/458 (14%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE----KGINIDAVTYTSVMHWLSNAGD 116
G N ++ +LD F A+R S F + + I + TY ++ L GD
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D AV +++ ++ + P ++Y+ M N+R+ A + EM + P+ Y
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234
Query: 177 LMEYLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ R G++E+A+ ++ ++ ++ G P+ A N++++ CK G
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLG--------------- 279
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV--TTDIEGPLS-- 291
+FKEA ++ N+ P+ I+ + + +TD++
Sbjct: 280 -------MFKEAGDVWERMVANN---------HQPDMITYGTMIHGLCRSTDVDSAARVY 323
Query: 292 ---IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ------LDSAVISTIIEVNC------ 336
I GLV ++V +SLL G DS +S I V
Sbjct: 324 SEMIKTGLV------PDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLK 377
Query: 337 ---DHRRRDGALLAFEYSVKMD-LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
D D A +E K D L+ + + +I L + K +I+EE +G
Sbjct: 378 GLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKE 437
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKI 450
L + + +I L R A K++ + D + + Y ALI + A A+++
Sbjct: 438 LDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRV 497
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
Y M P+ T+N L+ GL K + +A + +E
Sbjct: 498 YSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTRE 535
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+R+ G D F+Y++M+ + R+ ++E + ++ Y ++++ A
Sbjct: 431 ARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASK 490
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
A+ ++ +M +C PT ++Y + L ++ EA+ +EM+++G + TY
Sbjct: 491 FSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGS 550
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ L R K + AL +++++ + G+Q D NILI C AG+ +L MKE
Sbjct: 551 LIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKE 608
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY +++ K+I ++ + +KG+ D V + ++H L +AG VD
Sbjct: 539 KGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDE 598
Query: 120 AVNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK K C P +V+Y M + +A ++ +++ GL P+ +Y +
Sbjct: 599 ASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRI 658
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ L + E +++ ++M +G+ P NIL+ K G
Sbjct: 659 KGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++ +A++ M EKG +D TY S++ L +DGA+ +W ++
Sbjct: 512 TYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQI 571
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGK 186
K +V + + L +V EA+ + EM ++ PN TY LM+ G
Sbjct: 572 LDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGC 631
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+++A ++ + E G+ PD + N I+ C T + +L M
Sbjct: 632 FDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEM 677
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 183/461 (39%), Gaps = 64/461 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY++ +D +A+ + + V M G D VTY ++H S G
Sbjct: 256 QGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKE 315
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
++ EM + P I + +YM L + + KEA + + M +G P+ TY+VL+
Sbjct: 316 TAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLH 375
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G + L +F+ M+ G+ D + NILI+ K G +LI M+E +
Sbjct: 376 GYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMP 435
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + F ++AD D + P+ I N S+ QG
Sbjct: 436 DAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN--------------SLIQG 481
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSI-QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ NLV L+S +M + I + ++ ++II C R A F+ + +
Sbjct: 482 FCM----HGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHI 537
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
ER +I N+ +V +M KA GV + A
Sbjct: 538 G---ERPD-------VITFNSLIDGYGLVGKMEKA---FGV----------------LDA 568
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ P+ TY+AL+ Y G D L +++ M KG+ P+ T+ ++L GL
Sbjct: 569 MISVGIEPD----VVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLF 624
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGG 515
GR A+ E + + M+ C ++ GG
Sbjct: 625 NDGRTVGAKKMCHE--------MIESGTTMDISTCGIILGG 657
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 189/482 (39%), Gaps = 61/482 (12%)
Query: 18 DSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAW----LFFNWVSRSRGFNHDRFTYT 70
D+ LL +P ++ D+ + + VLK+ ++ L V +S G + + +Y
Sbjct: 172 DAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYN 231
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T++ F +S +F M ++G+ D VTY+S + L A +D A + +M
Sbjct: 232 TVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISN 291
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P V+Y + + + KE +++EM +RGL P+ +T M L + GK +EA
Sbjct: 292 GFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEA 351
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
E F M G +PD ++L+ G ++ + M+ N + + V+
Sbjct: 352 AEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYN----- 406
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
+ D G + +LI +
Sbjct: 407 -------------------------------ILIDAYGKRGMMDEAMLIFTQ-------- 427
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+ ++ + D+ T+I R A+ F + M L + Y +LI
Sbjct: 428 -----MQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGF 482
Query: 371 IKLNTFPKVAEIVEEMTKAG--HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQK 426
K E++ EM G V+ + +I+ L R V A IF L+ ++
Sbjct: 483 CMHGNLVKAKELISEMMSRGIPRPNTVFFNS-IINSLCKEGRVVEAQDIFDLVIHIGERP 541
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
T+ +LI Y G +KA + M GI P + T++ LL G + GR+ D I
Sbjct: 542 DVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILF 601
Query: 487 KE 488
+E
Sbjct: 602 RE 603
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A L F + + RG D +TY T++ F R++ F M G+ D + Y
Sbjct: 418 MDEAMLIFTQM-QERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKEC-YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
S++ G++ A + EM + P V + + + L RV EA D++ +I
Sbjct: 477 SLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
G P+ T+ L++ GK E+A + M G++PD + L++ C+ G
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDD 596
Query: 225 IILILRYM 232
+++ R M
Sbjct: 597 GLILFREM 604
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 39/238 (16%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHP---PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+ ++ + D T N ++ + MEKA+ + + S G D TY+ +LD +
Sbjct: 532 DLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI-SVGIEPDVVTYSALLDGYCR 590
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE-------MKLKE 131
RI +F M KG+ +TY ++H L N G GA + E M +
Sbjct: 591 NGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650
Query: 132 C-------------------YPTIVSYTAYMKILFLNDRV---------KEATDVYKEMI 163
C + + + I +N + +EA +++ +
Sbjct: 651 CGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSIS 710
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GL PN TY V++ L++ G EEA +FS M+++G P N +I + GE
Sbjct: 711 ATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGE 768
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 75/150 (50%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++++ + R+ + +F+L+ G D +T+ S++ G ++ A + + M
Sbjct: 511 FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI 570
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +V+Y+A + N R+ + +++EM+ +G+ P TY +++ L G+
Sbjct: 571 SVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTV 630
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCK 218
A ++ +M E+G D + C I++ C+
Sbjct: 631 GAKKMCHEMIESGTTMDISTCGIILGGLCR 660
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 183/468 (39%), Gaps = 40/468 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FF + ++RG TY +L +FG+A + V + M++ G DAVTY
Sbjct: 267 LDQAVAFFEDL-KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYN 325
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ + AG + A + M K P +Y M RV EA ++ M +
Sbjct: 326 ELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKN 385
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY ++ L + ++ LE+ +M +G P++ N ++ C K G +
Sbjct: 386 GYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYV 445
Query: 226 ILILRYMKE----------NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
+L MK N L Y FK+ DE + F+P +
Sbjct: 446 TRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDE------MISSGFTPCLTTY 499
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKK-------------------KNLVAIDSLLSGI 316
N + ++ +G S Q +V +LK N I+S+ +
Sbjct: 500 NALLNVLSR--QGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEV 557
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+I ++ T++ N RR +G AF+ + + +++ + K +
Sbjct: 558 YVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLY 617
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTAL 434
K E+ + + ++G S + L+ + A KI L Q +Y +
Sbjct: 618 SKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 677
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I + G +A +I M G+ P + T++ L+ G L ++A
Sbjct: 678 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEA 725
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/537 (21%), Positives = 208/537 (38%), Gaps = 72/537 (13%)
Query: 18 DSAQDLLKNLPIKWDSY-------TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D DLL +P+ S TV L E+A F + R +G TY
Sbjct: 161 DVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRR-QGVVPTIVTYN 219
Query: 71 TMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+LD++G R + + E M+ G+ D T ++V+ G +D AV +E++K
Sbjct: 220 VVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA 279
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ P +V+Y A +++ EA V KEM G P+ TY L RAG +EE
Sbjct: 280 RGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEE 339
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A + M G+ P+ N ++ G + + MK+N + +
Sbjct: 340 AAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG-------YVPNVN 392
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA- 308
T+ +L++ + + S F + + +E ++ P + +L + K+ +
Sbjct: 393 TY-------NLIFGMLGKKS-RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDY 444
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ +L+G+ ++L +T+I R A ++ + T Y AL+
Sbjct: 445 VTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLN 504
Query: 369 ILIKLNTFPKVAEIVEEM-------------------TKAGHSLG-------VYLGALL- 401
+L + + IV +M K G++ G VY+G +
Sbjct: 505 VLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFP 564
Query: 402 --------------IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
RL + K P+ + +++ +Y G KA
Sbjct: 565 SWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPD----LVIFNSMLAMYAKNGLYSKA 620
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS--IQADALSKDAV 502
+++ ++ + G+ P L T+N L+ K +AE K+ KS ++ D +S + V
Sbjct: 621 TEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 677
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++G+ D + +ML ++ + S +F+ +++ G++ D +TY S+M + + +
Sbjct: 593 KAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNES 652
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A I +++K + P +VSY + +KEA + EMI G+ P TY L
Sbjct: 653 WEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTL 712
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ + EA E+ + M ++P + +++ CKA
Sbjct: 713 VGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKA 754
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA F+ + +S G + D TY +++D++ ++ + + + ++ + D V+Y +V
Sbjct: 619 KATEMFDSIKQS-GLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTV 677
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
++ G + A I EM P +V+Y + + EA +V MI L
Sbjct: 678 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNL 737
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
P TY +++ +A +Y+EA E S++ +
Sbjct: 738 KPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 177/454 (38%), Gaps = 60/454 (13%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V V+K KA FN + + GF H TY ++++ G + +M+ V M+E
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 96 -GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G ++ Y M G V AVN++E M +C PT+ SY A M +L + +
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A VY M RG+ P+ Y++T+ M+ + + AL + + M G + + ++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMN------VVA 183
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
C G + +EN A Y +F + L
Sbjct: 184 YCTVVG---------GFYEENFKAEGYELFGKML-------------------------- 208
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
+ + LS L+ +L KK ++ + LL ++ + + + + I+
Sbjct: 209 --------ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C DGA+ ++ + Y LI L K + F + + +M G
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 395 VYLGALLI------HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKAL 448
Y LI + A R V A +P+ TY +LI G ++AL
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ----FTYRSLIDGLCHEGETNRAL 376
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ KGI P++ +N L+ GL G + +A
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 15/285 (5%)
Query: 8 VYKILKYSTWDSAQDLLK---NLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGF 62
+Y + K S + A+ L N ++ DSYT N ++ + L V + GF
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D+FTY +++D + +F KGI + + Y +++ LSN G + A
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ EM K P + ++ + L V +A + K MI +G P+ +T+ +L+
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---L 239
K E ALEI M + GV PD N L+ CK + ++ + M E A
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Query: 240 RYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVT 283
+ + E+L ++ DE LL ++ + +P DAV F T
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNKSVNP------DAVTFGT 571
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++ + +S + ++M KG D T+ ++H S ++ A+ I + M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P + +Y + + L + ++ + YK M+++G PN +T+ +L+E L R K
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+EAL + +M+ V PD LI+ CK G+ + R M+E
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G+ D FT+ ++ + ++ + + ++M + G++ D TY S+++ L +
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ ++ M K C P + ++ ++ L ++ EA + +EM + + P+ T+ L+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 179 EYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILIE 214
+ + G + A +F KM+EA V NI+I
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 176/465 (37%), Gaps = 43/465 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY ++ + + + M +G+ D+ TY +++ G V
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A I + P +Y + + L A ++ E + +G+ PN Y L++
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L G EA ++ ++M E G+ P+ NIL+ CK G +++ M +
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM------I 453
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID----QG 295
F + TF + L+ Q E +A+E + ++ + D
Sbjct: 454 SKGYFPDIF-TFNI------LIHGYSTQLKME-----NALEILDVMLDNGVDPDVYTYNS 501
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ L K + +++K + + ++E C +R+ D AL E
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 356 LNLERTAYLALIGILIK---LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+N + + LI K L+ + +EE K S Y ++IH
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY--NIIIHAFTEKLNVT 619
Query: 413 PAAKIFSLLPEDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A K+F + + +C TY ++ + G+ + K M G PSL T
Sbjct: 620 MAEKLFQEMVD--RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 469 LLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAVPMEEKICDL 511
++ L RV +A I+R +K + +A++ ICD+
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN--------TICDV 714
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 11 ILKYSTWDSAQDLL---KNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNH 64
+ +Y D A LL KN + D+ T ++ + ++ A+ F + + +
Sbjct: 541 LCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS 600
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
TY ++ F E ++ + +F+ M ++ + D TY ++ G+V+
Sbjct: 601 STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
EM P++ + + L + DRV EA + M+Q+GL P
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 5/208 (2%)
Query: 32 DSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D +T N ++ T ME A + V G + D +TY ++L+ + + +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILD-VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
++ M EKG + T+ ++ L +D A+ + EEMK K P V++ +
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 149 NDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
N + A ++++M + + + TY +++ A ++F +M + + PD
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 208 ACNILIEKCCKAGETRTIILILRYMKEN 235
++++ CK G L M EN
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 175/414 (42%), Gaps = 32/414 (7%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++ ++ + + + M+E GI+ Y S+MH + D + ++E +
Sbjct: 385 YSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFE--R 442
Query: 129 LKEC--YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
LKEC P+I+SY + + +V +A + KEM G+ N TY++L+ +
Sbjct: 443 LKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHD 502
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A IF +M ++G+QPD+A N+LIE CK G I IL M++ R+ F+
Sbjct: 503 FTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRP 562
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID-QGLVLILLKKKN 305
++ F VA + L D ++ + P + L+ L++K
Sbjct: 563 IIEGFAVAGDMKRAL---------------DILDLMRRSGCAPTVMTYNALIHGLIRKNQ 607
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD---LNLERTA 362
+ S+L+ + I + + I+ + AFEY K+ L L+
Sbjct: 608 VERAVSVLNKMSIAGITPNEHTYTIIMR---GYAATGDIAKAFEYFTKIKEGGLKLDVYI 664
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP--VPAAKIFSL 420
Y L+ K + EM+ + ++ +LI G ARR AA +
Sbjct: 665 YETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILID--GWARRGDVWEAADLMKQ 722
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ ED TYT+ I AG +A + M G+ P+L T+ L+ G
Sbjct: 723 MKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKG 776
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 91/178 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR Y +++ F + + + E MQ++ + + ++ + AGD+ A
Sbjct: 517 GLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRA 576
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++I + M+ C PT+++Y A + L ++V+ A V +M G+ PN +TYT++M
Sbjct: 577 LDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRG 636
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G +A E F+K++E G++ D L+ CCK+G ++ + + R M ++A
Sbjct: 637 YAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIA 694
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ +F + G D + Y T+L ++ R+ S V M + I + Y +
Sbjct: 645 KAFEYFTKIKEG-GLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNIL 703
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + GDV A ++ ++MK P I +YT+Y+ ++ A V EM GL
Sbjct: 704 IDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGL 763
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGET 222
PN TYT L++ RA + AL+ F +M+ AG++PD+AA + L+ G T
Sbjct: 764 KPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGST 823
Query: 223 RTIIL-ILRYMKENRLAL 239
T IL + R M EN L +
Sbjct: 824 YTGILSVCREMFENDLTV 841
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G H+ TY+ ++ F ++ +FE M + G+ D Y ++ G++D
Sbjct: 480 SSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMD 539
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I E+M+ + P+ ++ ++ + +K A D+ M + G P TY L+
Sbjct: 540 RAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALI 599
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L+R + E A+ + +KM AG+ P++ I++ G+ +KE L
Sbjct: 600 HGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLK 659
Query: 239 LRYPVFKEALQT 250
L +++ L+
Sbjct: 660 LDVYIYETLLRA 671
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 186/450 (41%), Gaps = 49/450 (10%)
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ FE M+ +GI +A +TS++H + A D+ GA++ EEMK + TIV+Y+ +
Sbjct: 297 RATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISG 356
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP- 204
+ + A +++KE N Y+ ++ ++G + A E+ +M+E G+
Sbjct: 357 FGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAP 416
Query: 205 ---------------DKAACNILIEKCCKAGETRTII----LILRYMKENRLALRYPVFK 245
D+ C I+ E+ + T +II LI Y+K ++A + K
Sbjct: 417 IDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISK 476
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAV-------EFVTTDIEGPLSIDQGLVL 298
E +++ + N + + FI +D E + + ++ +I L+
Sbjct: 477 E-MESSGIKHNN-----KTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIE 530
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE---VNCDHRRRDGALLAFEYSVKMD 355
K N+ +L + + +Q + IIE V D +R AL + +
Sbjct: 531 AFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKR---ALDILDLMRRSG 587
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
Y ALI LI+ N + ++ +M+ AG + + +++ + A
Sbjct: 588 CAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAF 647
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ F+ + E + Y L+ +G AL + + M + I + +N+L+ G
Sbjct: 648 EYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGW 707
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
+ G V +A K+ K +D VP
Sbjct: 708 ARRGDVWEAADLMKQMK--------EDGVP 729
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ ++ V M GI + TYT +M + GD+ A + ++
Sbjct: 594 TYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKI 653
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + Y ++ + R++ A V +EM + + N + Y +L++ R G
Sbjct: 654 KEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDV 713
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
EA ++ +M+E GV P+ I CCKAG+ + ++ M +
Sbjct: 714 WEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSD 760
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 133/337 (39%), Gaps = 28/337 (8%)
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
A ++ M RG+ PN + +T L+ A AL +M+ G++ +ILI
Sbjct: 295 HARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILI 354
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
K +T++ + + K N L ++ + + D VH
Sbjct: 355 SGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEM------ 408
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ D ++ I+ S+ G +I +KK L+ + L SI +I+ ++
Sbjct: 409 -EEDGID---APIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVK 464
Query: 334 VNCDHRRRDGALLAFEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ A S +M+ + Y LI I L+ F I EEM K+G
Sbjct: 465 IG-------KVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSG 517
Query: 391 HSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
+ LLI ++G+ R A +I + ++ Q + +I + AG
Sbjct: 518 LQPDRAIYNLLIEAFCKMGNMDR---AIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 574
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+AL I M R G P++ T+N L+ GL + +V A
Sbjct: 575 RALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERA 611
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 79/426 (18%), Positives = 158/426 (37%), Gaps = 63/426 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +++++ + +++ + + M+ GI + TY+ ++ + D A I+EEM
Sbjct: 454 SYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEM 513
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P Y ++ + A + ++M + + P+ + ++E AG
Sbjct: 514 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDM 573
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+ AL+I M+ +G P N LI + + + +L N++++ E
Sbjct: 574 KRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVL-----NKMSIAGITPNE- 627
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
T+ + + + F E+ T EG L +D + LL+
Sbjct: 628 -HTYTIIMRGYAATGDIAKAF-----------EYFTKIKEGGLKLDVYIYETLLRA---- 671
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
SG M ++ + + S I N F Y++ LI
Sbjct: 672 ---CCKSGRMQSALAVTREMSSQKIARN-----------TFVYNI-------------LI 704
Query: 368 GILIKLNTFPKVAEIVEEMTKAG-----HSLGVYLGALLIHRLGSARRP---VPAAKIFS 419
+ + A+++++M + G H+ Y+ A + G +R +
Sbjct: 705 DGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACC--KAGDMQRAQTVIDEMSDVG 762
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L P TYT LI + A D+ALK ++ M G+ P ++ L+ L V
Sbjct: 763 LKPN----LKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLSRATV 818
Query: 480 SDAEIY 485
+ Y
Sbjct: 819 MEGSTY 824
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 189/462 (40%), Gaps = 39/462 (8%)
Query: 44 PPMEKAWLFFNWVSRSRGFN---------------HDRFTYTTMLDIFGEAKRISSMKYV 88
P + FF+ ++R++ FN H+ +T M++ F + V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+ + G D T+ +++ L G V AV + + M C P +V+Y + + +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ A D+ ++M +R + + +TY+ +++ L R G + A+ +F +M+ G++
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQV 264
N L+ CKAG+ L+L+ M + F L F K+ + N+ +
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
SP I+ N ++ G + + L +++L ++ D
Sbjct: 326 TRGISPNIITYNTLMD--------------GYCM----QNRLSEANNMLDLMVRNKCSPD 367
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+++I+ C +R D + F K L Y L+ + E+ +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAG 442
EM G V +L+ L + A +IF L + + YT +I G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ A ++ ++ KG+ P++ T+ V+++GL K G +S+A I
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 196/462 (42%), Gaps = 63/462 (13%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++++ + S + M+E+ + D TY++++ L G +D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++++EM+ K ++V+Y + ++ L + + + K+M+ R + PN T+ VL++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
V+ GK +EA E++ +M G+ P+ N L++ Y +NRL
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDG---------------YCMQNRL--- 349
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL---SIDQGL- 296
++ N+ L V + SP+ ++ T+ I+G +D G+
Sbjct: 350 -------------SEANNMLDLMVRNKCSPDIVT-------FTSLIKGYCMVKRVDDGMK 389
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
V + K+ LVA ++ S +++ C + A F+ V +
Sbjct: 390 VFRNISKRGLVA---------------NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y L+ L K EI E++ K+ LG+ + +I + + A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+F LP + TYT +I GS +A + + M G P+ T+N L+
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
+ G ++ + +E KS S DA ++ I D+L G+
Sbjct: 555 RDGDLTASAKLIEEMKSC---GFSADASSIKMVI-DMLLSGE 592
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F +S+ RG + TY+ ++ F ++ +I + +F+ M G+ D +TY ++ L
Sbjct: 391 FRNISK-RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ G ++ A+ I+E+++ + IV YT ++ + +V++A +++ + +G+ PN
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TYTV++ L + G EA + KM+E G P+ N LI + G+ ++ M
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 233 K 233
K
Sbjct: 570 K 570
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY +LD + ++ +FE +Q+ +++ V YT+++ + G V+
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A N++ + K P +++YT + L + EA + ++M + G PN TY L+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+R G + ++ +M+ G D ++ ++I+
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 159/390 (40%), Gaps = 60/390 (15%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ +++EM P++V ++ + + + D K++ G+ N YT ++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ R K A + K+ + G +PD N LI+ G+ ++++ M EN
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
P+ ++ N V + + L++D +
Sbjct: 190 -------------------------------QPDVVTYNSIVNGICRSGDTSLALD---L 215
Query: 298 LILLKKKNLVA--------IDSLL-SGIMDKSIQL-----DSAVISTIIEVN------CD 337
L ++++N+ A IDSL G +D +I L + S+++ N C
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 338 HRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ DGALL + V ++ + L+ + +K + E+ +EM G S +
Sbjct: 276 AGKWNDGALL-LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKT 453
L+ R A + L+ + KC+ T+T+LI Y D +K+++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ ++G+ + T+++L+ G + G++ AE
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 178/435 (40%), Gaps = 64/435 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME W ++ + G D +TY+T ++ +A+ + K VFE M+ + ++ VTY
Sbjct: 224 MELLWKLKGFMEGA-GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYN 282
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L +G V+ A EEM P +Y A M L R+KEA + EM
Sbjct: 283 VMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCS 342
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN Y L++ ++ GK EA +I +M AGVQP+K + LI CK G+
Sbjct: 343 GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 402
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+L+ M ++ LR F T+ L Q H F D
Sbjct: 403 SKLLKEMI--KVGLRPDTF-----TYNP-------LMQGH---------------FQQHD 433
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN--CDHRRRDG 343
+G +L + +N SGI+ V S I +N C +
Sbjct: 434 KDGAFE-------LLNEMRN--------SGILPN-------VYSYGIMINGLCQNGESKE 471
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A E + L Y LI K E +E+MTKA ++ LI
Sbjct: 472 AGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIK 531
Query: 404 RLGSARRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L + R A + ++ L+P++ TY+ LI Y G+ +KA ++ + M
Sbjct: 532 GLSTVGRMEEAEEYYAQVQKRGLVPDE----FTYSGLIHGYCKTGNLEKADQLLRQMLNS 587
Query: 458 GIHPSLGTFNVLLAG 472
G+ P+ T+ LL G
Sbjct: 588 GLKPNADTYTDLLEG 602
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 156/426 (36%), Gaps = 36/426 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G ++ Y ++ + ++ + + M + G+ D TY +M D D
Sbjct: 376 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
GA + EM+ P + SY + L N KEA ++ +EMI GL PN + Y L+
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ G A E KM +A V PD N LI+ G +++ L
Sbjct: 496 IGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLV 555
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVE--FVTTDIEGPLSI 292
Y ++ D LL Q ++ P + D +E F + D E
Sbjct: 556 PDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYE----- 610
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
+ S+L ++ + D+ + +I + A +
Sbjct: 611 ---------------KVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 655
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
K L + Y +LI L K+ K +++EM K G G+ LI +
Sbjct: 656 KNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 715
Query: 413 PAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A +F L+P TYTALI G A +YK M +GI P +
Sbjct: 716 RARNVFDSILAKGLVPN----CVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVY 771
Query: 467 NVLLAG 472
NVL G
Sbjct: 772 NVLATG 777
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 172/439 (39%), Gaps = 96/439 (21%)
Query: 81 RISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
R +M+ +++L M+ GI D TY++ + A D D A ++EEM+ ++C V
Sbjct: 220 RADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEV 279
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + L + V+EA +EM+ GL P+ +TY LM L + + +EA + +M
Sbjct: 280 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM 339
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
+G++P+ L++ +MKE + A + + KE +
Sbjct: 340 SCSGLKPNIVVYGTLVDG---------------FMKEGKTAEAFDILKEMISA------- 377
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
V P + + DN L+ L K L LL ++
Sbjct: 378 -----GVQPN---KIMYDN-------------------LIRGLCKIGQLGRASKLLKEMI 410
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
++ D+ + +++ + +DGA
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAF-------------------------------- 438
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKCTA-TYTALI 435
E++ EM +G VY ++I+ L A + ++ E K A Y LI
Sbjct: 439 ---ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
+ G+ A + + M + +HP L +N L+ GL +GR+ +AE Y + +Q
Sbjct: 496 IGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQ---VQKR 552
Query: 496 ALSKDAVPMEEKICDLLYG 514
L VP E L++G
Sbjct: 553 GL----VPDEFTYSGLIHG 567
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 81 RISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
R +M+ F ++ E G+ D Y+S++ L D++ AV + +EM + P IV
Sbjct: 640 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIV 699
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
Y A + + + A +V+ ++ +GL PNC TYT L++ + G +A +++ +M
Sbjct: 700 CYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEM 759
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
+ G+ PD N+L C A + + + M NR +F + F +
Sbjct: 760 LDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF-NRGYANVSLFNTLVHGFCKRGKL 818
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
+H E + + VE V ++
Sbjct: 819 QETEKLLHVMMDREIVPNAQTVEKVVSEF 847
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 113/234 (48%), Gaps = 13/234 (5%)
Query: 8 VYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRG 61
+ + K A LLK + ++ D++T N +++ H + A+ N + R+ G
Sbjct: 390 IRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM-RNSG 448
Query: 62 FNHDRFTYTTMLDIF---GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ ++Y M++ GE+K ++ E M +G+ +A Y ++ S G++
Sbjct: 449 ILPNVYSYGIMINGLCQNGESKEAGNL---LEEMISEGLKPNAFMYAPLIIGHSKEGNIS 505
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A E+M +P + Y + +K L R++EA + Y ++ +RGL P+ +TY+ L+
Sbjct: 506 LACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLI 565
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ G E+A ++ +M +G++P+ L+E K+ + + IL+ M
Sbjct: 566 HGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 29 IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+ D + N ++K T ME+A ++ V + RG D FTY+ ++ + + +
Sbjct: 519 VHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQK-RGLVPDEFTYSGLIHGYCKTGNLEKA 577
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ M G+ +A TYT ++ + D + +I + M P Y ++
Sbjct: 578 DQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRN 637
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L ++ ++ A V E+ + GL P+ + Y+ L+ L + E+A+ + +M + G++P
Sbjct: 638 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPG 697
Query: 206 KAACNILIEKCCKAGE 221
N LI+ C++G+
Sbjct: 698 IVCYNALIDGFCRSGD 713
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 115/287 (40%), Gaps = 16/287 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA + S G + TYT +L+ + ++ + + + M G D Y
Sbjct: 574 LEKADQLLRQMLNS-GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYG 632
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
V+ LS + +++ A + E++ P + Y++ + L +++A + EM +
Sbjct: 633 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKE 692
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P Y L++ R+G A +F + G+ P+ LI+ CK G+
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ + M + +A V+ A + + L+ F+ + +
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAN----------- 801
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+S+ LV K+ L + LL +MD+ I ++ + ++
Sbjct: 802 ----VSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVV 844
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G + TYT ++D + I+ +++ M ++GI DA Y + S+A D++
Sbjct: 726 AKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLE 785
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + EEM Y + + + +++E + M+ R + PN T ++
Sbjct: 786 QALFLTEEM-FNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVV 844
Query: 179 EYLVRAGKYEEALEIFSKMQE 199
+AGK EA +F+++Q+
Sbjct: 845 SEFGKAGKLGEAHRVFAELQQ 865
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 16/197 (8%)
Query: 304 KNLVAIDSL-----LSGIMDKS-IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K+L+ D++ L G M+ + I D ST IE +C R D A FE + D
Sbjct: 216 KDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCA 275
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ Y +I L + + EEM G S + L++ L R A +
Sbjct: 276 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKAL 335
Query: 418 FSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
++ C+ Y L+ + G +A I K M G+ P+ ++ L+
Sbjct: 336 L----DEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIR 391
Query: 472 GLEKLGRVSDAEIYRKE 488
GL K+G++ A KE
Sbjct: 392 GLCKIGQLGRASKLLKE 408
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 180/441 (40%), Gaps = 54/441 (12%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA F + R + DR+TY T++ + + + M++K I + TY+S+
Sbjct: 63 KALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSI 122
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L + + + EEM C P + ++ M+ ++ +++A +VY+ M++ G
Sbjct: 123 IKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGY 182
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSK--MQEAGVQPDKAACNILIEKCCKAGETRTI 225
P+ +Y +L+ L + GK +E+L+I S+ M+ AG P+ + LI C+ GE
Sbjct: 183 KPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE---- 238
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
++AL+ F S+L E + + T
Sbjct: 239 ------------------LEKALEVF------GSML---------EAGCKPNKYTYTT-- 263
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA- 344
L+ L + + ++ L + I D+ +++I C D A
Sbjct: 264 ----------LIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 313
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
L E S L + LI KL + E+V EM G + +LI
Sbjct: 314 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAG 373
Query: 405 LGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L A + A +++ + E + + + +G G+ D+A +++ + G P+
Sbjct: 374 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPN 433
Query: 463 LGTFNVLLAGLEKLGRVSDAE 483
TF +L L KLGRV DA+
Sbjct: 434 PETFRILSESLIKLGRVEDAQ 454
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 10/222 (4%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQV--------LKTHPPMEKAWLFFNWVSRS 59
++ + K D + +L + ++ Y N + L +EKA F + +
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G +++TYTT++ A+++ + +FE M + I DAV Y S++ G +D
Sbjct: 253 -GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311
Query: 120 AVNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ EM PTIV++ + ++ A ++ EM +GL + TY +L+
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L RA K +EALE++ +M+E D +C + CK G
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTG 413
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 32 DSYTVNQVLKTHP---PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKY 87
D + N V++ MEKA + + S G+ D +Y ++ + ++ S+K
Sbjct: 150 DVFAFNGVMQGFARSNNMEKAREVYQHMVES-GYKPDNVSYHILIHGLAKIGKLDESLKI 208
Query: 88 VFEL-MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ E+ M+ G + +T+++++H L G+++ A+ ++ M C P +YT + L
Sbjct: 209 LSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGL 268
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ-EAGVQPD 205
++V +A +++++M Q +PP+ Y L+ + G +EA +++ +M AG+QP
Sbjct: 269 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 328
Query: 206 KAACNILIEKCCKAGE 221
N LI+ CK G+
Sbjct: 329 IVTFNTLIDGFCKLGK 344
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 154/403 (38%), Gaps = 92/403 (22%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M + I Y V+ L+ AG + A+ ++E MK + C P++V
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLV-------------- 46
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ-EAGVQPDKAACN 210
TY VL+ AG++ +AL++F M+ E V+PD+ N
Sbjct: 47 ---------------------TYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYN 85
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
LI C +G T +L M++ +A + ++ SL+ + P+ S
Sbjct: 86 TLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIK---------SLVKEAKPEESY 136
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ + + A D+ + QG S M+K+ ++
Sbjct: 137 KVLEEMMAAG-CNPDVFAFNGVMQGFAR---------------SNNMEKAREV------- 173
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT--K 388
+++ V+ + +Y LI L K+ + +I+ EM
Sbjct: 174 -----------------YQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRA 216
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSAD 445
AG+ V + LIH L A ++F + E C TYT LI A
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE-AGCKPNKYTYTTLIAGLCRAEKVI 275
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRK 487
+A ++++ M + I P +N L+AG K G + +AE +YR+
Sbjct: 276 QARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE 318
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 74/149 (49%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A + +S G T+ T++D F + ++ + M KG+ D TY
Sbjct: 309 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYR 368
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ LS A +D A+ ++++M+ K+ VS +++ L + +A V++ +
Sbjct: 369 ILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKS 428
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
G PN T+ +L E L++ G+ E+A ++
Sbjct: 429 GAVPNPETFRILSESLIKLGRVEDAQKLM 457
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 181/453 (39%), Gaps = 70/453 (15%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N L+ ME+A LF N + T M+D +A+++ +FE M +K
Sbjct: 175 LNAALEIRDDMERAGLFPNVL-----------TVNIMIDRLCKAQKLEEACSIFEGMDDK 223
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
+AVT++S++ L G VD A +++E+M P + YT+ ++ F R ++
Sbjct: 224 VCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 283
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+YKEM+ G P+ M+ + +AG+ E+ +F ++ G PD + +ILI
Sbjct: 284 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 343
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDS--LLWQVHPQFSPEF 272
KAG + MKE L + + F K N + LL ++ + P
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHP-- 401
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
P + G V+ L ID
Sbjct: 402 ----------------PTVVTYGSVI-----DGLAKID---------------------- 418
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
R D A + FE + + L Y +LI K+ + I+EE+ + G +
Sbjct: 419 -------RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 471
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALK 449
VY L+ L A A F + +D KC TY+ LI +KA
Sbjct: 472 PNVYTWNCLLDALVKAEEINEALICFQSM-KDLKCPPNQITYSILINGLCRVRKFNKAFV 530
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M + G+ P+ T+ +++GL K G + +A
Sbjct: 531 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEA 563
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 18/192 (9%)
Query: 40 LKTHPP-----------------MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI 82
+K HPP +++A++ F ++S G + Y++++D FG+ RI
Sbjct: 397 VKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSNGIKLNVVVYSSLIDGFGKVGRI 455
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+ E + +KG+ + T+ ++ L A +++ A+ ++ MK +C P ++Y+
Sbjct: 456 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL 515
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ L + +A ++EM + GL PN TYT ++ L +AG EA +FS+ + G
Sbjct: 516 INGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGG 575
Query: 203 QPDKAACNILIE 214
PD A+ N +IE
Sbjct: 576 IPDSASYNAMIE 587
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ +A R+ +FE +++ A Y +++ +AG D A + E K K P
Sbjct: 64 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
++++Y + L RV+EA +++EM +R PN TY +L++ L R GK ALEI
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIR 182
Query: 195 SKMQEAGVQPDKAACNILIEKCCKA 219
M+ AG+ P+ NI+I++ CKA
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKA 207
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 174/438 (39%), Gaps = 33/438 (7%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ Y TM+ +G A + + E + KG + Y ++ L V+ A+ I+EE
Sbjct: 91 YAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEE 150
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK ++ P + +Y + +L ++ A ++ +M + GL PN T ++++ L +A K
Sbjct: 151 MK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQK 209
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEA IF M + P+ + LI+ K G + M + V+
Sbjct: 210 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTS 269
Query: 247 ALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+++F + D + VH SP+ N ++ V E ++G
Sbjct: 270 LIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGE----TEKG------- 318
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+L I D+ S +I + F + L+ A
Sbjct: 319 -------RALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHA 371
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y A+I K K +++EEM GH V +I L R A +F
Sbjct: 372 YNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLF---- 427
Query: 423 EDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
E+ K Y++LI + G D+A I + + +KG+ P++ T+N LL L K
Sbjct: 428 EEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 487
Query: 477 GRVSDAEIYRKEKKSIQA 494
+++A I + K ++
Sbjct: 488 EEINEALICFQSMKDLKC 505
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +T+ +LD +A+ I+ F+ M++ + +TY+ +++ L +
Sbjct: 468 KGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK 527
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A W+EM+ P ++YT + L + EA+ ++ G P+ +Y ++E
Sbjct: 528 AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIE 587
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L A K +A +F + + G C +L++ KA
Sbjct: 588 GLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKA 627
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 161/419 (38%), Gaps = 62/419 (14%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMK----------ILFLNDRVKEATDVYKEMIQRGLPP 169
A +I + M+ + P +YT + +L +R+ EA ++++++ Q P
Sbjct: 29 AFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKVP 88
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
Y Y ++ AGK++EA + + + G P A N ++ K + I
Sbjct: 89 CAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIF 148
Query: 230 RYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
MK + + P + + D L + + E D + +
Sbjct: 149 EEMKRDAVP-NVPTYNILI---------DMLCREGKLNAALEIRDDMERAGLFPNVLTVN 198
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
+ ID+ L K + L S+ G+ DK ++ S++I+ R D A +E
Sbjct: 199 IMIDR-----LCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYE 253
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS-----LGVYLGALL--- 401
+ Y +LI K +I +EM G S + Y+ +
Sbjct: 254 KMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 313
Query: 402 -------IHRLGSARRPVPAAKIFSLL-------------------PEDQKC---TATYT 432
+ R +A +P A+ +S+L ++Q C T Y
Sbjct: 314 ETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYN 373
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
A+I + +G +KA ++ + M KG P++ T+ ++ GL K+ R+ +A + +E KS
Sbjct: 374 AVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 432
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 190/459 (41%), Gaps = 46/459 (10%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE----KGINIDAVTYTSVMHWLSNAGD 116
G N ++ +LD F A+R S F + + I + TY V+ L GD
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D AV +++ ++ ++ P ++Y+ M L DR+ A D+ EM + G+ P+ Y
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233
Query: 177 LMEYLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ +AG++E+ + ++ K+ ++ G +P+ A N++++ CK G + + + M N
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293
Query: 236 RL---ALRYPVFKEAL--------------QTFKVADENDSLLWQVHPQFSPEFISDNDA 278
L + Y + L + K D+ ++ + + +A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL------------DSA 326
+F D G + L+ N++ SG++D++I+L D+
Sbjct: 354 WKF--WDSAGFAGLRN------LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTV 405
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
T+I C + + A FE + L+ +Y ++I L + ++ E+M
Sbjct: 406 TFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGS 443
K G ++ LI R A +I+S + D C+ TY LI A
Sbjct: 466 DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKM-ADNGCSPTVITYNTLIDGLCKAEK 524
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+A + + M G P + T+ L+ GL ++ DA
Sbjct: 525 YQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDA 563
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 198/472 (41%), Gaps = 36/472 (7%)
Query: 35 TVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N VL++ +++A F+ + R R D TY+T++ + R+ + +
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRR-RQVAPDCITYSTLMCGLAKQDRLDHALDLLDE 218
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLND 150
M G+ D V Y +++ AG+ + + +W+++ K P + +Y + L
Sbjct: 219 MPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
R KE +V++ M+ L P+ TY +L+ L R+G + A ++S++ + G+ D A N
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLA-LR----YPVFKEALQTFKVADENDSLLWQVH 265
L++ C+AG + ++ A LR Y + + L + DE LW +
Sbjct: 339 SLVKGFCQAGRVQE---AWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE-LWDL- 393
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI-DSLLSGIMDKSIQLD 324
+ D V F T + GL K ++ +SG QLD
Sbjct: 394 --LEKDVACIPDTVTFGT--------LIHGLCQNGFANKAFTIFEEARVSG-----KQLD 438
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S++I C+ R A+ +E K Y ALI ++ I
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
+M G S V LI L A + A+ + + E+ TY +LI FS
Sbjct: 499 KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYR--KEKKS 491
D AL I+K + KG+ + N+L+ GL G+V +A ++ KEKK+
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN 610
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 186/481 (38%), Gaps = 27/481 (5%)
Query: 13 KYSTWDSAQDLLKNLP---IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDR 66
K D A DLL +P ++ D N +L EK ++ + + G +
Sbjct: 205 KQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNL 264
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY MLD + R + V+E M + D +TY ++H L +GDVDGA ++ E
Sbjct: 265 ATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSE 324
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ Y + +K RV+EA + GL N TY ++++ L +G
Sbjct: 325 IIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGM 383
Query: 187 YEEALEIFSKMQ-EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+EA+E++ ++ + PD LI C+ G I +E R++
Sbjct: 384 VDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF---EEARVS------G 434
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS-IDQGLVLILLKKK 304
+ L F + + L + E + D P S I L+ +
Sbjct: 435 KQLDVFSYSSMINGLC------NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ S + D +T+I+ C + A V+ + T Y
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
+LI L I +++ G + V + +LIH L SA + A +FS + E
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608
Query: 425 QKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ C TY L+ + G DKA ++ ++ G+ P + ++N + GL R+ +
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668
Query: 482 A 482
Sbjct: 669 G 669
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D TY +++ K+I +++ + KG+ +D + + ++H L +AG VD A
Sbjct: 539 GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598
Query: 121 VNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
++++ +MK K+ C P +V+Y M L+ + +A ++ + + GL P+ +Y ++
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIK 658
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L + E +++ ++ G+ P NIL+ K G
Sbjct: 659 GLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++D +A++ V M E G D TY S++ L + +D A++IW+++
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGK 186
K ++ + + L +V EA V+ +M ++ PPN TY LM+ L G
Sbjct: 571 LYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGY 630
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
++A +++ + E G++PD + N I+ C I +L
Sbjct: 631 IDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLL 673
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK-GINIDAVTYTSVMHWLSNAGDVD 118
+G D + ++ A ++ +VF M+EK + VTY ++M L G +D
Sbjct: 573 KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID 632
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +W + P I+SY +K L DR+ E + E++ RG+ P T+ +L+
Sbjct: 633 KAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Query: 179 EYLVRAGKYE 188
+++ G +
Sbjct: 693 RAVIKYGPIQ 702
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 192/448 (42%), Gaps = 24/448 (5%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L+ P E A FF W + + + H + +++++ + + ++ VF ++++G+ +
Sbjct: 124 LREKP--EVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLM 181
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
S++ N G V+ + +W MK P++ +Y + L + ++ A V+
Sbjct: 182 TESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF 241
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ M + P+ TY ++++ +AGK ++A+E F M+ V+PDK LI+ C
Sbjct: 242 EVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSE 301
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
+ T + + M+E L P +L + + + + AV
Sbjct: 302 RDFDTCLSLYLEMEER--GLEIPPHSYSLVIGGLCKQRKCM--------------EAYAV 345
Query: 280 EFVTTDIEG---PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
F T + +G ++I L+ K ++ L + ++ + D+ S ++ C
Sbjct: 346 -FETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLC 404
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
R D + F++ + + Y +LI L K + EEM++ G + Y
Sbjct: 405 KSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSY 464
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTM 454
+I L + A +F + E+ + T+T LI F ++A+K + M
Sbjct: 465 CYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKM 524
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KGI P++ +F L GL G+V+ A
Sbjct: 525 IDKGITPTVASFRALAIGLCLCGKVARA 552
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
DSY+ N ME+A F + ++ GF D TY+ +++ ++ R+ +F+
Sbjct: 366 DSYSKNG------SMEEAMRLFERM-KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDF 418
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ KG+ I+A+ Y S++ L AG ++ A N++EEM K C Y A + L + +
Sbjct: 419 CRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGK 478
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ +A ++ M + G YT+T+L++ L + K EEA++ + KM + G+ P A+
Sbjct: 479 IDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRA 538
Query: 212 LIEKCCKAGETRTIILIL 229
L C G+ IL
Sbjct: 539 LAIGLCLCGKVARACKIL 556
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R++G + Y +++D G+A RI + +FE M EKG D+ Y +++ L+ G +
Sbjct: 420 RNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKI 479
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ ++ M+ + C T+ ++T + LF + +EA + +MI +G+ P ++ L
Sbjct: 480 DQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRAL 539
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L GK A +I + G+ P+ A + +I CKA
Sbjct: 540 AIGLCLCGKVARACKILDDLAPMGIIPETAFED-MINTLCKA 580
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 40/207 (19%)
Query: 316 IMDKS-IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+MD I D+ + +I+ C + A+ F ++ ++ Y+ LI
Sbjct: 243 VMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSER 302
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---Y 431
F + EM + G + + +L+I L R+ + A +F + + + C A Y
Sbjct: 303 DFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQ-KGCRANVAIY 361
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL---------------------- 469
TALI Y GS ++A+++++ M +G P T++VL
Sbjct: 362 TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRN 421
Query: 470 -------------LAGLEKLGRVSDAE 483
+ GL K GR+ DAE
Sbjct: 422 KGVAINAMFYASLIDGLGKAGRIEDAE 448
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 205/503 (40%), Gaps = 42/503 (8%)
Query: 16 TWDSAQDLL---KNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTY 69
+WD DLL +N +++D +T + V+ + +A FF + +S G+ TY
Sbjct: 283 SWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVEL-KSSGYEPGTVTY 341
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+L +FG+A S + + M++ +D+VTY ++ AG + + + M
Sbjct: 342 NALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTR 401
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K P V+YT + + +A ++ +M + G PN TY ++ L + + EE
Sbjct: 402 KGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEE 461
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE----------NRLAL 239
++I S M+ G P++ N L+ C G+ + + + R MK N L
Sbjct: 462 MIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLIS 521
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN------------DAVEFVTTDIE 287
Y L K+ DE + F+P + N A E V D+
Sbjct: 522 AYGRCGSELDAAKMYDE------MMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMR 575
Query: 288 G----PLSIDQGLVL-ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
P L+L K N+ ++ + I D I ++ T+I N R
Sbjct: 576 NKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVR 635
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
G AFE +K + + +++ I K N + + ++++ + ++G + L+
Sbjct: 636 GMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLM 695
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
+ A +I L + + +Y +I + G +A+++ M +GI
Sbjct: 696 NMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGIC 755
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P + T+N ++G G ++ +
Sbjct: 756 PCIFTYNTFVSGYAGRGMFAEVD 778
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 196/483 (40%), Gaps = 44/483 (9%)
Query: 35 TVNQVLKTHPPMEKAW---LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N +L + M ++W L R+ G D FT +T++ G I+ K F
Sbjct: 269 TYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVE 328
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT----AYMKILF 147
++ G VTY +++ AG A+NI +EM+ C V+Y AY++ F
Sbjct: 329 LKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGF 388
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+E V M ++G+ PN TYT ++ RAGK +AL++F++M+++G P+
Sbjct: 389 Y----EEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVC 444
Query: 208 ACNILIEKCCKAGETRTIILILRYMK-----ENRLA---------------LRYPVFKEA 247
N ++ K + +I IL M+ NR+ VF+E
Sbjct: 445 TYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREM 504
Query: 248 LQT-FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
F+ + + L + + E + E + + L+ L ++ +
Sbjct: 505 KNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDW 564
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEV-----NCDHRRRDGALLAFEYSVKMDLNLERT 361
A +S+L + +K + + S ++ N R G + ++ + L RT
Sbjct: 565 KAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDI-YDGQIFPSWVLLRT 623
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
LA K + EE+ K G+ + + ++ A K+ L+
Sbjct: 624 LILA----NFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLI 679
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
E Q TY +L+ +Y G KA +I K + + G P L ++N ++ G + G +
Sbjct: 680 RESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLM 739
Query: 480 SDA 482
+A
Sbjct: 740 QEA 742
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D + +ML IF + + + +L++E G+ D VTY S+M+ + G+ A
Sbjct: 648 GYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKA 707
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
I + + P +VSY +K ++EA V EM RG+ P +TY +
Sbjct: 708 EEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSG 767
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
G + E E+ S M + +P++ I+++ CKA
Sbjct: 768 YAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKA 806
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 14 YSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWV---SRSRGFNHDRFTYT 70
+ + ++ D +K+ ++ D ++ + L E+A L F WV S S D
Sbjct: 142 FDSLNALFDSVKSELLEVDIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVKLDSKAVE 201
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
M+ I G + S + + + ++D T+++H S G A+ ++E MK
Sbjct: 202 LMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDC 261
Query: 131 ECYPTIVSYTAYMKILFLNDRV-KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
P++V+Y + + R + D+ EM GL + +T + ++ R G E
Sbjct: 262 GLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINE 321
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A E F +++ +G +P N L++ KAG + IL+ M++N L + E +
Sbjct: 322 AKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVA 381
Query: 250 TF 251
+
Sbjct: 382 AY 383
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 63/136 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D TY ++++++ + + + + + G + D V+Y +++ G +
Sbjct: 680 RESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLM 739
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ + EM + P I +Y ++ E +V MIQ+ PN TY ++
Sbjct: 740 QEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKII 799
Query: 178 MEYLVRAGKYEEALEI 193
++ +A KY++A++
Sbjct: 800 VDGYCKARKYQDAMDF 815
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 170/408 (41%), Gaps = 40/408 (9%)
Query: 89 FELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
F+L++E KG D TY+ V+ +L +A V+ A +++EMK+ P + +YT +
Sbjct: 208 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 267
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+++A +++EM G P TYT L+ ++A + +A +IF +M +AG +P+
Sbjct: 268 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 327
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
L++ CKAG ++ + V+ + + T AD + +
Sbjct: 328 DVTYGALVDGLCKAG---------------NISKAFEVYAKLIGTSDSADSDFYFPCEDR 372
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
+P ++ LV L K + LL ++ + +
Sbjct: 373 HTLAPNVVTYG------------------ALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 414
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
V +I+ C + D A F K Y +LI + K +++ +
Sbjct: 415 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 474
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAG 442
M K + V +I L A K+ SL+ E++ C+ TYTALI AG
Sbjct: 475 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM-EEKGCSPNVVTYTALIDGLGKAG 533
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
D +L ++ M RKG P+ T+ VL+ L G + A + E K
Sbjct: 534 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 581
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 152/335 (45%), Gaps = 20/335 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + Y ++D F +A +I S + VF M + G TYTS++ + G +D
Sbjct: 407 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD 466
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +M C P +V+YTA + L ++A + M ++G PN TYT L+
Sbjct: 467 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 526
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L +AGK + +L++F++M G P+ +LI C AG L+L MK+
Sbjct: 527 DGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT--- 583
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+P + LQ ++ A + FS FI+ +E + + P++ G+++
Sbjct: 584 -YWPKY---LQGYRCAIQG----------FSKSFIASLGILEEMESYGTVPIAPVYGMLI 629
Query: 299 ILLKKKNLVAIDSLLSGIM---DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K + I L M S++ D+ + +++I+ C + + A + +
Sbjct: 630 DCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 689
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
E + ++ LI L+++ + + ++ + G
Sbjct: 690 FVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 23/227 (10%)
Query: 17 WDSAQDLLKNLPIKW---DSYTVNQVLK--THPP-MEKAWLFFNWVSRSRGFNHDRFTYT 70
+D A L+K + K D+ T ++V+ H +EKA+L F + + G D +TYT
Sbjct: 204 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-KMVGVTPDVYTYT 262
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
++D F +A I +++FE M+ G + VTYT+++H A V A +I+ M
Sbjct: 263 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI----------------QRGLPPNCYTY 174
C P V+Y A + L + +A +VY ++I + L PN TY
Sbjct: 323 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ L +A K + A E+ M +G +P+ + LI+ CKAG+
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 195/526 (37%), Gaps = 63/526 (11%)
Query: 9 YKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH---- 64
+ + K W A D+++ K D+ VL TH M + ++ + F H
Sbjct: 18 HALCKEGRWADALDMIEREDFKLDT-----VLCTH--MISGLMEASYFDEAMSFLHRMRC 70
Query: 65 -----DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ TY T+L F + K++ K + +M +G N + + S++H N D
Sbjct: 71 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 130
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE------ATDVYKEMIQRGLPPNCYT 173
A + M C P V Y ++ + +++ A +Y EM+ N
Sbjct: 131 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 190
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
L GK+++A ++ +M G PD + + +I C A + L+ + MK
Sbjct: 191 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 250
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ----FSPEFISDNDAVEFVTTDIEGP 289
+ + + +F A + W SP ++ + + P
Sbjct: 251 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 310
Query: 290 LS-------IDQG----------LVLILLKKKNLVAIDSLLSGIMDKSIQLDS------- 325
+ +D G LV L K N+ + + ++ S DS
Sbjct: 311 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 370
Query: 326 ---------AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+++ C + D A + + Y ALI K
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 430
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTA 433
E+ +MTK G+ V+ LI R+ R A K+ S + +D CT TYTA
Sbjct: 431 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS-CTPNVVTYTA 489
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+I G ++KALK+ M KG P++ T+ L+ GL K G++
Sbjct: 490 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 535
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/447 (19%), Positives = 155/447 (34%), Gaps = 41/447 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF DRFT + R + ++++ + +D V T ++ L A D A
Sbjct: 5 GFCMDRFTVGCFAHALCKEGRWAD---ALDMIEREDFKLDTVLCTHMISGLMEASYFDEA 61
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M+ C P +V+Y + ++ + M+ G PN + L+
Sbjct: 62 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHS 121
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE--TRTIILILRYMKENRLA 238
Y A ++ ++M G P NI I C + + ++ + + LA
Sbjct: 122 YCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLA 181
Query: 239 LRYPVFKEALQTFKVA----DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ K + F + D + F+ D V T + +++
Sbjct: 182 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 241
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+L K V D + +I +DS + +IE A FE +
Sbjct: 242 AFLLFQEMKMVGVTPD-----VYTYTILIDSFCKAGLIE---------QAQWLFEEMRSV 287
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ Y ALI +K P+ +I M AG L+ L A A
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347
Query: 415 AKIFSLL--------------PEDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCR 456
++++ L ED+ A TY AL+ A D A ++ M
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G P+ ++ L+ G K G++ A+
Sbjct: 408 SGCEPNHIVYDALIDGFCKAGKIDSAQ 434
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
I G +K + + E M+ G A Y ++ S AG ++ A+ + +EM P
Sbjct: 596 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VP 652
Query: 135 TIVS-----YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ V Y + ++ L L +V+EA +Y EM +RG P + L++ LV K++E
Sbjct: 653 SSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDE 712
Query: 190 ALEIFSKMQEAGVQ 203
AL++ + GV
Sbjct: 713 ALQLCYGICHEGVN 726
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D Y T+L G+ K++S + ++E M++ G D TY ++ L G V
Sbjct: 475 KGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKE 534
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV ++EE++ +C P I+SY + + L N V EA + EM +GL P+ TY+ L+E
Sbjct: 535 AVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIE 594
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ K E A +F +M G P+ NIL++ +AG T + + ++E L
Sbjct: 595 CFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTP 654
Query: 238 -ALRYPVFKEALQT-----FKVADENDSLLWQVHP 266
++ Y + + LQ+ F+V +N W V P
Sbjct: 655 DSITYAIL-DRLQSGSNRKFRVRRQNPITGWVVSP 688
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 217/519 (41%), Gaps = 81/519 (15%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWD----SYTVNQVLKTHPPMEKAWLFFN-- 54
+R TIS V ++K + + +L L KWD +YT +L+ H + FN
Sbjct: 203 IRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVY 262
Query: 55 ---WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
W S+G+ D F Y +LD + +++ VF+ M+ K N D TYT ++
Sbjct: 263 MEMW---SKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMT 319
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G + ++ ++EEM K C P +++Y ++ L + V +A ++ MI+ PN
Sbjct: 320 GKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNE 379
Query: 172 YTYTVLMEYLV---RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
+TY++++ LV + G+ +E LE+ +K I K A RT+ +
Sbjct: 380 FTYSIILNVLVAEGQLGRLDEVLEVSNK---------------FINKSIYAYLVRTLSKL 424
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
+ +RL +W H D DA I
Sbjct: 425 GHSSEAHRLFCN--------------------MWSFHDG------GDRDAY------ISM 452
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
S+ +G K + AI+ LLS + +K I D+ + +T++ ++ L
Sbjct: 453 LESLCRG-------GKTVEAIE-LLSKVHEKGISTDTMMYNTVLST-LGKLKQVSHLHDL 503
Query: 349 EYSVKMDLNLERT-AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+K D Y LI L ++ + E+ EE+ + + LI+ LG
Sbjct: 504 YEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGK 563
Query: 408 ARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
V A + L +D+ TY+ LI + + A ++ M +G P++
Sbjct: 564 -NGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIV 622
Query: 465 TFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
T+N+LL LE+ GR ++ ++Y K ++ L+ D++
Sbjct: 623 TYNILLDCLERAGRTAETVDLYAK----LREQGLTPDSI 657
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 118/535 (22%), Positives = 213/535 (39%), Gaps = 71/535 (13%)
Query: 2 RDTISNVYKIL----KYSTWDSAQDLLKNLPIKWDSYTVN-------QVLKTHPPMEKAW 50
RD I V +L +S+ + D +L + S +V+ ++LK+ + A
Sbjct: 93 RDLICRVIDMLLHRNPHSSLITIDDRFSDLSSYFQSLSVSLTPAEASEILKSLNSPDLAL 152
Query: 51 LFFNWVSR-SRGFNHDRFTYTTM---LDIFGEAKRISSMKYVFELM---QEKG------- 96
FF+ S F HD FTY+ + L +KRI ++ + M Q +G
Sbjct: 153 QFFHRCSSLCPKFRHDAFTYSRILLMLSHSSSSKRIDQVREILSQMDRDQIRGTISTVNI 212
Query: 97 ----------------------INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ ++A TY ++ + D D A N++ EM K
Sbjct: 213 LIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSKGYQL 272
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
I +Y + L ++++ + V+K+M + P+ YTYT+++ + G+ EE+L +F
Sbjct: 273 DIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALF 332
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+M G P+ A N +I+ K+G IL+ M +N + L VA
Sbjct: 333 EEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVL-VA 391
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
+ L +V + S +FI+ SI LV L K + L
Sbjct: 392 EGQLGRLDEV-LEVSNKFINK---------------SIYAYLVRTLSKLGHSSEAHRLFC 435
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+ D +++E C + A+ + ++ + Y ++ L KL
Sbjct: 436 NMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLK 495
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TY 431
+ ++ E+M + G ++ +LI LG + A ++F L E C +Y
Sbjct: 496 QVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEEL-ESSDCKPDIISY 554
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
+LI G D+A + M KG++P + T++ L +E G+ E+ R
Sbjct: 555 NSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTL---IECFGKTDKVEMAR 606
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 45/82 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G N D TY+T+++ FG+ ++ + +F+ M +G + VTY ++ L AG
Sbjct: 578 QDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRT 637
Query: 118 DGAVNIWEEMKLKECYPTIVSY 139
V+++ +++ + P ++Y
Sbjct: 638 AETVDLYAKLREQGLTPDSITY 659
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 84/141 (59%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY ++ +G A R+ S +FE ++ D ++Y S+++ L GDVD A +
Sbjct: 464 DIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRF 523
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM+ K P +V+Y+ ++ D+V+ A ++ EMI G PN TY +L++ L R+
Sbjct: 524 KEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERS 583
Query: 185 GKYEEALEIFSKMQEAGVQPD 205
G+ EA+++++K+++ G+ PD
Sbjct: 584 GRTAEAVDLYAKLKQQGLTPD 604
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 9/210 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y T+ G K++S + ++E M++ G D TY ++ AG VD AV I+
Sbjct: 429 DTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIF 488
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EE++ C P ++SY + + L N V EA +KEM ++GL P+ TY+ L+E +
Sbjct: 489 EELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKT 548
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
K E A +F +M G P+ NIL++ ++G T + + +K+ L ++ Y
Sbjct: 549 DKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 608
Query: 242 PVFKEALQT-----FKVADENDSLLWQVHP 266
V E LQ+ +V +N W V P
Sbjct: 609 AVL-ERLQSGRHGKLRVRRQNPITGWVVSP 637
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/486 (21%), Positives = 193/486 (39%), Gaps = 68/486 (13%)
Query: 4 TISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKA-WLFFNWVSRSRGF 62
T+S L++ +S D ++ +K TVN ++ +++ L W G
Sbjct: 130 TLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILIGFFGDLDRCVGLVKKW-----GL 184
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ ++Y +L + + V+ M G ++D + ++ L+ VD A
Sbjct: 185 RFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYK 244
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++E+MK + C P +YT +++ + E+ +++ M+++G N Y ++E L
Sbjct: 245 VFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALA 304
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+ ++A+ +FSKM E G QP++ ++L+ G+ + I+ K+ Y
Sbjct: 305 KGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYA 364
Query: 243 VFKEALQTFKVADENDSL---LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
F L + E L +W VH + D DA + + I +
Sbjct: 365 YFVRTLSKLGHSSEAHRLFCNMWNVHDK------GDKDAYMSMLESLCSSGKIAE----- 413
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
AID LL+ +K I D+ + +T+
Sbjct: 414 --------AID-LLNRFHEKCITTDTIMYNTVFTA------------------------- 439
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
L +L + ++ E+M + G ++ +LI G A R A KIF
Sbjct: 440 ----------LGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFE 489
Query: 420 LLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
L E+ C +Y +LI G D+A +K M KG++P + T++ L+ K
Sbjct: 490 EL-ENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKT 548
Query: 477 GRVSDA 482
+V A
Sbjct: 549 DKVEMA 554
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
K L +Y L+ ++L K + +M + G+SL ++ +L+ L ++
Sbjct: 181 KWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVD 240
Query: 413 PAAKIFSLLPEDQK---C---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A K+F ED K C T TYT +I + AG D++L +++ M KG +L +
Sbjct: 241 KAYKVF----EDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAY 296
Query: 467 NVLLAGLEKLGRVSDAEI 484
N ++ L K GR++D +
Sbjct: 297 NTMIEALAK-GRMADKAV 313
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G N D TY+T+++ FG+ ++ +F+ M +G + + VTY ++ L +G
Sbjct: 527 QEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRT 586
Query: 118 DGAVNIWEEMKLKECYPTIVSY 139
AV+++ ++K + P ++Y
Sbjct: 587 AEAVDLYAKLKQQGLTPDSITY 608
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
TY LI Y AG D A+KI++ + P + ++N L+ L K G V +A + KE
Sbjct: 467 TYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKE- 525
Query: 490 KSIQADALSKDAV 502
+Q L+ D V
Sbjct: 526 --MQEKGLNPDVV 536
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 210/477 (44%), Gaps = 35/477 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A F+ + + +G + ++++Y +++ F +A +F M G + + T+
Sbjct: 369 LDEALAVFDEM-KEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHV 427
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +G A+ +E MK K P + + A + L + R+ A V+ E+
Sbjct: 428 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDM 487
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ TYT++++ +A K +EA+ FS M E G PD A N LI+ K G+
Sbjct: 488 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEA 547
Query: 226 ILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+ +KE ++ + L KV + L H P I+ N ++
Sbjct: 548 WKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDC 607
Query: 282 VTTDIEGPLSIDQGLVLILLKK---KNLVAIDSLLSGI---------------MDKSIQL 323
++ + G ++ G++ + +K +L + ++++ G+ M K +
Sbjct: 608 LSKN--GEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAP 665
Query: 324 DSAVISTIIEVNCDHRRRDGALLAF-EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D A + TI+ + AL EY +K D N +++++ +L+ ++ K E
Sbjct: 666 DYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEF 725
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL---LPEDQKCTATYTALIGVYF 439
E + G L + LI L ++ + A ++F+ L K T +Y +LI
Sbjct: 726 AENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLK-TGSYNSLIRGLV 784
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD-----AEIYRKEKKS 491
D A ++ M R G P T+N++L + K R+ + AE++RK +S
Sbjct: 785 DENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYES 841
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FTY +LD G++ RI M V M KG VTY +++ L + ++ A
Sbjct: 803 GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQA 862
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ + + PT +Y + L ++ +A +++ EM++ G PNC Y +L+
Sbjct: 863 IDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNG 922
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AG E +IF KM E G+ PD + +LI+ C AG + R + E
Sbjct: 923 HRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLE 976
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 178/442 (40%), Gaps = 83/442 (18%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W ++ DR TY T+LD G++ S+ ++ M G N + V+YT+V+ L
Sbjct: 307 WKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQV 366
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G +D A+ +++EMK K P SY + + D A +++ M G PN YT+
Sbjct: 367 GRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 426
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ + Y ++G+ +A++ + M+ G+ PD AA N ++ ++G
Sbjct: 427 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSG-------------- 472
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
RL + VF E L+ V+ D++ + + + + ++A+ F + +E
Sbjct: 473 -RLGMAKRVFYE-LKDMGVSP--DTITYTMMIKCCSKASKADEAMNFFSDMVE------T 522
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
G V +L +L ID+L G + + A F +M
Sbjct: 523 GCVPDVLALNSL--IDTLYKG-----------------------GKGNEAWKLFHQLKEM 557
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ Y L+ L + +V ++EEMT + H P
Sbjct: 558 KIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIH---------------------PP 596
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
I TY ++ G + A+ + +M KG P L ++N ++ GL
Sbjct: 597 NLI------------TYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLI 644
Query: 475 KLGRVSDA-EIYRKEKKSIQAD 495
K R +A ++ + KK + D
Sbjct: 645 KEERFEEAFRMFCQMKKILAPD 666
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 33 SYTVN-QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
SYT+ +VL ++A+ + S G D T+T ++ + +A R+S K VF
Sbjct: 250 SYTICIRVLGQAARFDEAYQILGKMEDS-GCKPDVVTHTVVIQVLCDAGRLSDAKDVFWK 308
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ D VTY +++ ++GD + IW M IVSYTA + L R
Sbjct: 309 MKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGR 368
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ EA V+ EM ++G+ P Y+Y L+ ++A ++ ALE+F+ M G P+ +
Sbjct: 369 LDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVL 428
Query: 212 LIEKCCKAGETRTIILILRYMK 233
I K+G++ I +MK
Sbjct: 429 FINYYGKSGQSLKAIQRYEHMK 450
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 108/525 (20%), Positives = 188/525 (35%), Gaps = 131/525 (24%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
+V +L++ P +A F +R H + ML++ R+ M VF+LMQ+
Sbjct: 77 SVVHMLRSAPGPAEALELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQK 136
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+ + + T+ +V + G + A M+ +Y + L + E
Sbjct: 137 QIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAE 196
Query: 155 ATDVYKEMIQ-----------------------------------RGLPPNCYTYTVLME 179
A +VYK M++ RG+ PN Y+YT+ +
Sbjct: 197 AMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIR 256
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +A +++EA +I KM+++G +PD ++I+ C AG
Sbjct: 257 VLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAG------------------- 297
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT-TDIEGPLSIDQGLVL 298
R K+ K +D+ D V ++T D G D G
Sbjct: 298 RLSDAKDVFWKMKASDQKP------------------DRVTYITLLDKCG----DSGDSQ 335
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+++ N + D I+ + +++ C R D AL F+ + ++
Sbjct: 336 SVMEIWNAMVADGYNDNIVS---------YTAVVDALCQVGRLDEALAVFDEMKEKGISP 386
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH--------------- 403
E+ +Y +LI +K + F + E+ M G S Y L I+
Sbjct: 387 EQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRY 446
Query: 404 --------------------------RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGV 437
RLG A+R K + P+ T TYT +I
Sbjct: 447 EHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPD----TITYTMMIKC 502
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A AD+A+ + M G P + N L+ L K G+ ++A
Sbjct: 503 CSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEA 547
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 18 DSAQDL---LKNLPIKWDSYTVNQVLKTHPPMEKAW-----LFFNWVSRSRGFNHDRFTY 69
D A+DL +K L D +T N +L M K+ L +G+ TY
Sbjct: 790 DIAEDLFTEMKRLGCGPDEFTYNLILDA---MGKSMRIEEMLRVQAEMHRKGYESTYVTY 846
Query: 70 TTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
T++ ++KR+ ++ + LM E G + TY ++ L AG + A N++ EM
Sbjct: 847 NTIISGLVKSKRLEQAIDLYYNLMSE-GFSPTPCTYGPLLDGLLKAGKMVDAENLFNEML 905
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P Y + + + ++++M+++G+ P+ +YTVL++ L AG+
Sbjct: 906 EYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLN 965
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ L F ++ E G++PD N+LI+ K+ + + MK+
Sbjct: 966 DGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKK 1011
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
L++N +S GF+ TY +LD +A ++ + +F M E G + Y +++
Sbjct: 865 LYYNLMSE--GFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNG 922
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
AG+ + I+E+M + P I SYT + L R+ + ++++++ GL P+
Sbjct: 923 HRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPD 982
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
Y +L++ L ++ + EEA+ +F++M++ G+ P+ N LI KAG+
Sbjct: 983 LIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGK 1033
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 200/477 (41%), Gaps = 46/477 (9%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+AW F+ + + TY T+L G ++ + ++ E M + +TY +V
Sbjct: 546 EAWKLFHQLKEMK-IEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTV 604
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ LS G+V+ A+ + M K C P + SY M L +R +EA ++ +M ++ L
Sbjct: 605 LDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKIL 663
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSK-MQEAGVQPDKAACNILIEKCC-KAG----- 220
P+ T ++ V+ G +EAL + + +A DK++ + L+E KAG
Sbjct: 664 APDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSI 723
Query: 221 ------ETRTIIL-------ILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHP 266
+R I+L ++R++ +++ AL EA Q F K SL +
Sbjct: 724 EFAENIASRGILLNDFFLCPLIRHLCKHKKAL------EAHQLFNKFKGLGVSLKTGSYN 777
Query: 267 QFSPEFISDN--DAVEFVTTDIE----GPLSIDQGLVLILLKKKNLVAIDSLL---SGIM 317
+ +N D E + T+++ GP L+L + K + I+ +L + +
Sbjct: 778 SLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKS--MRIEEMLRVQAEMH 835
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
K + +TII +R + A+ + + + Y L+ L+K
Sbjct: 836 RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMV 895
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLI--HRLGSARRPVPAAKIFSLLPED--QKCTATYTA 433
+ EM + G + +L+ HR+ V +IF + E +YT
Sbjct: 896 DAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENV--CQIFEKMVEQGINPDIKSYTV 953
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
LI +AG + L ++ + G+ P L +N+L+ GL K R+ +A E K
Sbjct: 954 LIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMK 1010
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +L+ A ++ +FE M E+GIN D +YT ++ L AG ++ ++ + ++
Sbjct: 916 YNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLL 975
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P ++ Y + L ++R++EA ++ EM ++G+ PN YTY L+ +L +AGK
Sbjct: 976 ELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKAS 1035
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
EA +++ ++ G +P+ N LI +G T
Sbjct: 1036 EAAQMYEELLIKGWKPNVFTYNALIRGYSVSGST 1069
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 158/408 (38%), Gaps = 52/408 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EK+ F ++ SRG + F ++ + K+ +F + G+++ +Y
Sbjct: 719 VEKSIEFAENIA-SRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYN 777
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L + +D A +++ EMK C P +Y + + + R++E V EM ++
Sbjct: 778 SLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRK 837
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G TY ++ LV++ + E+A++++ + G P L++ KAG+
Sbjct: 838 GYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDA 897
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ M E ++ L ++A ++ + Q+ +
Sbjct: 898 ENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTEN-VCQIFEKM----------------- 939
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
++QG I D + +I+ C R + L
Sbjct: 940 ------VEQG-------------------------INPDIKSYTVLIDTLCTAGRLNDGL 968
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F +++ L + Y LI L K + + EM K G +Y LI L
Sbjct: 969 SYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHL 1028
Query: 406 GSARRPVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIY 451
G A + AA+++ LL + K TY ALI Y +GS D A Y
Sbjct: 1029 GKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY 1076
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D Y ++D G+++RI +F M++KGI + TY S++ L AG A
Sbjct: 978 GLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEA 1037
Query: 121 VNIWEEMKLKECYPTIVSYTAY-------------------------MKILFLNDRVKE- 154
++EE+ +K P + +Y A +K ++ V E
Sbjct: 1038 AQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDEN 1097
Query: 155 ----ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
A ++ EM +RG P+ +TY ++++ + ++ + EE L++ ++ E
Sbjct: 1098 LINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAE 1146
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/405 (19%), Positives = 163/405 (40%), Gaps = 24/405 (5%)
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
++ V E + + N D ++ S+M + N V+ ++ E + + +
Sbjct: 686 ALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLI 745
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+ L + + EA ++ + G+ +Y L+ LV + A ++F++M+ G
Sbjct: 746 RHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 805
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK---EALQTFKVADENDSL 260
PD+ N++++ K+ ++ + M Y + L K ++ L
Sbjct: 806 PDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 865
Query: 261 LWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ + + FSP T GPL +D LLK +V ++L + +++
Sbjct: 866 YYNLMSEGFSP------------TPCTYGPL-LDG-----LLKAGKMVDAENLFNEMLEY 907
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ + + + ++ + + FE V+ +N + +Y LI L
Sbjct: 908 GCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDG 967
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALIGV 437
++ + G + + LLI LG + R A +F+ + + TY +LI
Sbjct: 968 LSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILH 1027
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
AG A +A ++Y+ + KG P++ T+N L+ G G +A
Sbjct: 1028 LGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNA 1072
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 176/432 (40%), Gaps = 23/432 (5%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+D + + + + +FE M+ +G+ D VTY S++ G +D V +EE
Sbjct: 131 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 190
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P +++Y A + ++ + Y+EM GL PN +Y+ L++ + G
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPV 243
++A++ + M+ G+ P++ LI+ CK G + M + + + Y
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ L + E + L ++ T + L+ L+ +K
Sbjct: 311 LIDGLCDAERMKEAEELFGKMD-----------------TAGVIPNLASYNALIHGFVKA 353
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
KN+ LL+ + + I+ D + T I C + + A + + + Y
Sbjct: 354 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 413
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
L+ K + +++EM + + V +LI L + A F+ +
Sbjct: 414 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 473
Query: 424 D---QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
D Q A +TA+I + A +++ M +KG+ P + L+ G K G V
Sbjct: 474 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 533
Query: 481 DAEIYRKEKKSI 492
+A R + I
Sbjct: 534 EALALRDKMAEI 545
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 159/374 (42%), Gaps = 19/374 (5%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEK--AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+K++ + D T N ++ K L F + G + +Y+T++D F +
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
+ + M+ G+ + TYTS++ G++ A + EM +V+YTA
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ L +R+KEA +++ +M G+ PN +Y L+ V+A + ALE+ ++++ G
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 370
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
++PD I C + +++ MKE + ++ + D+
Sbjct: 371 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM---------DAYF 421
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDK 319
+P + + ++ T + + ID L K LV A+D D
Sbjct: 422 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG------LCKNKLVSKAVDYFNRISNDF 475
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+Q ++A+ + +I+ C + + A FE V+ L +RTAY +L+ K +
Sbjct: 476 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 535
Query: 380 AEIVEEMTKAGHSL 393
+ ++M + G L
Sbjct: 536 LALRDKMAEIGMKL 549
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 161/391 (41%), Gaps = 32/391 (8%)
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++H + G D +++M PT+ +Y + + V+ A +++EM
Sbjct: 99 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
RGL P+ TY +++ + G+ ++ + F +M++ +PD N LI CK G+
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
+ R MK N L + + D+ + Q + +F D V V
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLV---------DAFCKEGMMQQAIKFYVDMRRVGLVPN 269
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ ID K NL L + ++ ++ + + +I+ CD R A
Sbjct: 270 EYTYTSLIDAN-----CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 324
Query: 345 LLAFEYSVKMDL-----NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
F KMD NL +Y ALI +K + E++ E+ G + L
Sbjct: 325 EELFG---KMDTAGVIPNL--ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 379
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALKIYKTM 454
I L S + + AAK+ ++ E ++C + YT L+ YF +G+ + L + M
Sbjct: 380 TFIWGLCSLEK-IEAAKV--VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
I ++ TF VL+ GL K VS A Y
Sbjct: 437 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 467
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 158/402 (39%), Gaps = 61/402 (15%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+ ++ L + G ++ A+ + +MK +P S + + + +K+MI
Sbjct: 63 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 122
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G P +TY ++++ + + G E A +F +M+ G+ PD N +I+ K G
Sbjct: 123 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 182
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+ MK+ + E D + + +F +EF
Sbjct: 183 DTVCFFEEMKD------------------MCCEPDVITYNALINCFCKFGKLPIGLEFY- 223
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+++G GL K N+V+ +L+ + ++ I+ D RR
Sbjct: 224 REMKG-----NGL------KPNVVSYSTLVDAFCKE------GMMQQAIKFYVDMRRV-- 264
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
L+ EY+ Y +LI K+ + EM + G V LI
Sbjct: 265 GLVPNEYT-----------YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 313
Query: 404 RLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L A R A ++F ++P A+Y ALI + A + D+AL++ + +
Sbjct: 314 GLCDAERMKEAEELFGKMDTAGVIPN----LASYNALIHGFVKAKNMDRALELLNELKGR 369
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK--SIQADAL 497
GI P L + + GL L ++ A++ E K I+A++L
Sbjct: 370 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 68 TYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+ ++D + K +S ++ Y + + G+ +A +T+++ L V+ A ++E+
Sbjct: 447 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQ 506
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K P +YT+ M F V EA + +M + G+ + YT L+ L +
Sbjct: 507 MVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 566
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++A +M G+ PD+ C +++K + G + + Y+ +++L
Sbjct: 567 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 617
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA +FN +S G + +T M+D + ++ + +FE M +KG+ D YT
Sbjct: 461 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 520
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+M G+V A+ + ++M +++YT+ + L +++++A +EMI
Sbjct: 521 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 580
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
G+ P+ +++ G +EA+E+ S
Sbjct: 581 GIHPDEVLCISVLKKHYELGCIDEAVELQS 610
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D Y T+L G+ K++S + ++E M++ G D TY ++ L G V
Sbjct: 470 KGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKE 529
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV ++EE++ +C P I+SY + + L N V EA + EM +GL P+ TY+ L+E
Sbjct: 530 AVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIE 589
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ K E A +F +M G P+ NIL++ +AG T + + ++E L
Sbjct: 590 CFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLREQGLTP 649
Query: 238 -ALRYPVFKEALQT-----FKVADENDSLLWQVHP 266
++ Y + + LQ+ F+V +N W V P
Sbjct: 650 DSITYAIL-DRLQSGSNRKFRVRRQNPITGWVVSP 683
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 216/519 (41%), Gaps = 81/519 (15%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWD----SYTVNQVLKTHPPMEKAWLFFN-- 54
+R TIS V ++K + + +L L KWD +YT +L+ H + FN
Sbjct: 198 IRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVY 257
Query: 55 ---WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
W S G+ D F Y +LD + +++ VF+ M+ K N D TYT ++
Sbjct: 258 MEMW---SNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMT 314
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G + ++ ++EEM K C P +++Y ++ L + V +A ++ MI+ PN
Sbjct: 315 GKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNE 374
Query: 172 YTYTVLMEYLV---RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
+TY++++ LV + G+ +E LE+ +K I K A RT+ +
Sbjct: 375 FTYSIILNVLVAEGQLGRLDEVLEVSNK---------------FINKSIYAYLVRTLSKL 419
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
+ +RL +W H D DA I
Sbjct: 420 GHSSEAHRLFCN--------------------MWSFHDG------GDRDAY------ISM 447
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
S+ +G K + AI+ LLS + +K I D+ + +T++ ++ L
Sbjct: 448 LESLCRG-------GKTVEAIE-LLSKVHEKGISTDTMMYNTVLST-LGKLKQVSHLHDL 498
Query: 349 EYSVKMDLNLERT-AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+K D Y LI L ++ + E+ EE+ + + LI+ LG
Sbjct: 499 YEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGK 558
Query: 408 ARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
V A + L +D+ TY+ LI + + A ++ M +G P++
Sbjct: 559 -NGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIV 617
Query: 465 TFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
T+N+LL LE+ GR ++ ++Y K ++ L+ D++
Sbjct: 618 TYNILLDCLERAGRTAETVDLYAK----LREQGLTPDSI 652
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 118/535 (22%), Positives = 212/535 (39%), Gaps = 71/535 (13%)
Query: 2 RDTISNVYKIL----KYSTWDSAQDLLKNLPIKWDSYTVN-------QVLKTHPPMEKAW 50
RD I V IL +S+ + D +L + S +V+ ++LK+ + A
Sbjct: 88 RDLICRVIDILLHRNPHSSLITIDDRFSDLSSYFQSLSVSLTPAEASEILKSLNSPDLAL 147
Query: 51 LFFNWVSR-SRGFNHDRFTYTTM---LDIFGEAKRISSMKYVFELM---QEKG------- 96
FF+ S F HD FTY+ + L +KRI ++ + M Q +G
Sbjct: 148 QFFHRCSSLCPKFRHDAFTYSRILLMLSHSSSSKRIDQVREILSQMDRDQIRGTISTVNI 207
Query: 97 ----------------------INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ ++A TY ++ + D D A N++ EM
Sbjct: 208 LIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQL 267
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
I +Y + L ++++ + V+K+M + P+ YTYT+++ + G+ EE+L +F
Sbjct: 268 DIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALF 327
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+M G P+ A N +I+ K+G IL+ M +N + L VA
Sbjct: 328 EEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVL-VA 386
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
+ L +V + S +FI+ SI LV L K + L
Sbjct: 387 EGQLGRLDEVL-EVSNKFINK---------------SIYAYLVRTLSKLGHSSEAHRLFC 430
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+ D +++E C + A+ + ++ + Y ++ L KL
Sbjct: 431 NMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLK 490
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TY 431
+ ++ E+M + G ++ +LI LG + A ++F L E C +Y
Sbjct: 491 QVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEEL-ESSDCKPDIISY 549
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
+LI G D+A + M KG++P + T++ L +E G+ E+ R
Sbjct: 550 NSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTL---IECFGKTDKVEMAR 601
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 45/82 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G N D TY+T+++ FG+ ++ + +F+ M +G + VTY ++ L AG
Sbjct: 573 QDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRT 632
Query: 118 DGAVNIWEEMKLKECYPTIVSY 139
V+++ +++ + P ++Y
Sbjct: 633 AETVDLYAKLREQGLTPDSITY 654
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + D FTY T++D F RI + +F M+ KGI DAV+Y +++ +G +
Sbjct: 337 RGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVE 396
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM KE PT+++Y + LF +V++A +++ EM L P TY +L++
Sbjct: 397 AKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLD 456
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L + EA+E+F ++ QP N LI+ CKA
Sbjct: 457 GLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKA 496
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 86/152 (56%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T++D + I K +F M+ +GI+ D V Y+S++H + + G +GA ++ EM
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ +P +V++ + L +++EA + K MIQRG P+ +TY L++ G+ +
Sbjct: 301 DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+A ++F M+ G++ D + N+LI CK+G
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSG 392
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 196/468 (41%), Gaps = 49/468 (10%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + + T+T+++ RIS + M G + VTY ++++ L G+
Sbjct: 156 RGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTML 215
Query: 120 AVNIWEEM---------KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
AV + EEM +K P +V Y + L + + + +++ EM RG+ P+
Sbjct: 216 AVKLHEEMLNGNGGFGVTIK---PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPD 272
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
Y+ ++ + G++E A +F++M + GV P+ N+LI+ CKAG+ +L+
Sbjct: 273 VVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLK 332
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
M + E+ TF D F E D+ FV+ + +G +
Sbjct: 333 LMIQR---------GESPDTFTYNTLIDG--------FCLEGRIDDARDLFVSMESKG-I 374
Query: 291 SIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE-VNCDHRRRDGAL 345
D +L+ K +V L +M K I +T++ + + + RD
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
L E V DL E Y L+ L K N + E+ + + + LI L
Sbjct: 435 LFGEMKVH-DLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGL 493
Query: 406 GSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
AR+ A ++F+ L + + TYT +I +G + A ++ M KG P+L
Sbjct: 494 CKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNL 553
Query: 464 GTFNVLLAGL---EKLGRVSDAEIYRKEKK--------SIQADALSKD 500
TFN L+ G +++ +V + EK SI D LSKD
Sbjct: 554 VTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKD 601
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 72/133 (54%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++D +A++I + +F + +G+ + +TYT ++H L +G ++ A +++ M+
Sbjct: 486 FNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGME 545
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K C P +V++ M+ ND +++ ++ +EM ++ P+ T +++++ L + KY
Sbjct: 546 EKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYR 605
Query: 189 EALEIFSKMQEAG 201
E L + G
Sbjct: 606 EYLHLLPTFPAQG 618
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 132/364 (36%), Gaps = 45/364 (12%)
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++++ M L P ++ + ++V V EM++RG PN T+T L++
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + EA + KM G +P+ L+ C G T + + M
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFG 231
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ P + ++ + D ID+G L L
Sbjct: 232 VTI-------------------------KPNLVCYCTIIDSLCKDG----LIDKGKELFL 262
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K + I D S+II C R +GA F V ++
Sbjct: 263 EMK--------------GRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+ LI L K + +++ M + G S + LI R A +F
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ + +Y LI Y +G +A K+Y+ M K I P++ T+N LL GL + G+
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428
Query: 479 VSDA 482
V DA
Sbjct: 429 VRDA 432
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
AW F + + + TY +LD + +S +F ++ + ++
Sbjct: 432 AWNLFGEM-KVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLI 490
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
L A ++ A ++ + + P +++YT + L + +++ A D++ M ++G
Sbjct: 491 DGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCA 550
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
PN T+ LM + + ++ +E+ +M E PD + +I+++
Sbjct: 551 PNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVD 596
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 170/410 (41%), Gaps = 40/410 (9%)
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
G K + K + E+M KG D TY+ V+ +L +A V+ A +++EEMK P++
Sbjct: 437 GAGKFDQAFKIICEMMG-KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSV 495
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+YT + +++A + EM+ +G PN TYT L+ ++A + A E+F
Sbjct: 496 YTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEM 555
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
M G +P+ LI+ CKAG+ I M R + + + D
Sbjct: 556 MLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM-------RGDIESSDMDKYFKLDH 608
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA-IDSLLSG 315
N+ EGP I G ++ L K N V LL
Sbjct: 609 NNC---------------------------EGPNVITYGALVDGLCKANRVKEAHELLDT 641
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
++ + + V +I+ C + A F + + Y + I L K N
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR 701
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYT 432
V +++ +M + + V + ++ L + A K+ L E++ C TYT
Sbjct: 702 LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLM-LKMEEKGCNPNVVTYT 760
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A+I + +G ++ L++++ MC KG P+ T+ VL+ G + +A
Sbjct: 761 AMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEA 810
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 171/443 (38%), Gaps = 50/443 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ + TY ++ +F A ++ + V M +D T + + L G A
Sbjct: 206 GYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREA 265
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ +E + + P V Y + L +EA D+ M PN TY +L+
Sbjct: 266 FDLIDEAE--DFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSG 323
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+R G+ I S M G P++ N LI CK+ + +
Sbjct: 324 CLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRD---------------YSYA 368
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
Y +FK+ ++ P ++ N + V ++ E P S +L L
Sbjct: 369 YKLFKKMIKC----------------GCQPGYLVYNIFIGSVCSNEEQPSSD----ILDL 408
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
++K S ++D + L+ +S C + D A + +
Sbjct: 409 VEKA--------YSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDD 460
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+ Y +IG L + K + EEM + G VY +LI A A K F
Sbjct: 461 STYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDE 520
Query: 421 LPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ + CT TYTALI Y A A ++++ M +G P++ T+ L+ G K G
Sbjct: 521 MLH-KGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAG 579
Query: 478 RVSDA-EIYRKEKKSIQADALSK 499
++ A +IY + + I++ + K
Sbjct: 580 QIEKACQIYARMRGDIESSDMDK 602
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G ++ Y ++D F + ++ + VF M E+G + + TY+S + L +D
Sbjct: 644 AHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLD 703
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + +M C P +V YT + L + EA + +M ++G PN TYT ++
Sbjct: 704 LVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMI 763
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ ++GK E+ LE+F M G P+ +LI CC G +L MK+
Sbjct: 764 DGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQ 819
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TYT ++ + +AK++ +FE+M +G + VTYT+++ AG ++
Sbjct: 524 KGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEK 583
Query: 120 AVNIWEEMK---------------LKECY-PTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
A I+ M+ C P +++Y A + L +RVKEA ++ M+
Sbjct: 584 ACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTML 643
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G PN Y +++ + GK ++A E+F+KM E G P+ + I+ K
Sbjct: 644 AHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLD 703
Query: 224 TIILILRYMKENRLALRYPVFKE 246
++ +L M EN ++ E
Sbjct: 704 LVLKVLSKMLENSCTPNVVIYTE 726
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF D TY+ ++ +A ++ +FE M+ GI TYT ++ AG +
Sbjct: 454 KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQ 513
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++EM K C P +V+YTA + ++ A ++++ M+ G PN TYT L++
Sbjct: 514 ARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALID 573
Query: 180 YLVRAGKYEEALEIFSKMQ 198
+AG+ E+A +I+++M+
Sbjct: 574 GHCKAGQIEKACQIYARMR 592
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 166/419 (39%), Gaps = 52/419 (12%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M + G+ ++ V ++ L AG D A I EM K P +Y+ + L +
Sbjct: 416 MLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASK 475
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V++A +++EM + G+ P+ YTYT+L++ +AG ++A + F +M G P+
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTA 535
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
LI KA + + M + + A + + Q++ + +
Sbjct: 536 LIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKAC-QIYARMRGD 594
Query: 272 FISDNDAVEFVTTD---IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
I +D ++ D EGP I G ++ L K N ++ ++
Sbjct: 595 -IESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKAN--------------RVKEAHELL 639
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
T++ C+ + Y A+I K+ E+ +M++
Sbjct: 640 DTMLAHGCEP--------------------NQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 679
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSAD 445
G+S +Y + I L R K+ S + E+ CT YT ++ G D
Sbjct: 680 RGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENS-CTPNVVIYTEMVDGLCKIGKTD 738
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAVP 503
+A K+ M KG +P++ T+ ++ G K G++ E++R D SK P
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFR--------DMCSKGCAP 789
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 170/408 (41%), Gaps = 40/408 (9%)
Query: 89 FELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
F+L++E KG D TY+ V+ +L +A V+ A +++EMK+ P + +YT +
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+++A +++EM G P TYT L+ ++A + +A +IF +M +AG +P+
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
L++ CKAG ++ + V+ + + T AD + +
Sbjct: 393 DVTYGALVDGLCKAGN---------------ISKAFEVYAKLIGTSDSADSDFYFPCEDR 437
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
+P ++ LV L K + LL ++ + +
Sbjct: 438 HTLAPNVVTYG------------------ALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
V +I+ C + D A F K Y +LI + K +++ +
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAG 442
M K + V +I L A K+ SL+ E++ C+ TYTALI AG
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM-EEKGCSPNVVTYTALIDGLGKAG 598
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
D +L ++ M RKG P+ T+ VL+ L G + A + E K
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 152/335 (45%), Gaps = 20/335 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + Y ++D F +A +I S + VF M + G TYTS++ + G +D
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD 531
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +M C P +V+YTA + L ++A + M ++G PN TYT L+
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L +AGK + +L++F++M G P+ +LI C AG L+L MK+
Sbjct: 592 DGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT--- 648
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+P + LQ ++ A + FS FI+ +E + + P++ G+++
Sbjct: 649 -YWPKY---LQGYRCAIQG----------FSKSFIASLGILEEMESYGTVPIAPVYGMLI 694
Query: 299 ILLKKKNLVAIDSLLSGIM---DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K + I L M S++ D+ + +++I+ C + + A + +
Sbjct: 695 DCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 754
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
E + ++ LI L+++ + + ++ + G
Sbjct: 755 FVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 23/227 (10%)
Query: 17 WDSAQDLLKNLPIKW---DSYTVNQVLK--THPP-MEKAWLFFNWVSRSRGFNHDRFTYT 70
+D A L+K + K D+ T ++V+ H +EKA+L F + + G D +TYT
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-KMVGVTPDVYTYT 327
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
++D F +A I +++FE M+ G + VTYT+++H A V A +I+ M
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI----------------QRGLPPNCYTY 174
C P V+Y A + L + +A +VY ++I + L PN TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ L +A K + A E+ M +G +P+ + LI+ CKAG+
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 195/526 (37%), Gaps = 63/526 (11%)
Query: 9 YKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH---- 64
+ + K W A D+++ K D+ VL TH M + ++ + F H
Sbjct: 83 HALCKEGRWADALDMIEREDFKLDT-----VLCTH--MISGLMEASYFDEAMSFLHRMRC 135
Query: 65 -----DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ TY T+L F + K++ K + +M +G N + + S++H N D
Sbjct: 136 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE------ATDVYKEMIQRGLPPNCYT 173
A + M C P V Y ++ + +++ A +Y EM+ N
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
L GK+++A ++ +M G PD + + +I C A + L+ + MK
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ----FSPEFISDNDAVEFVTTDIEGP 289
+ + + +F A + W SP ++ + + P
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 375
Query: 290 LS-------IDQG----------LVLILLKKKNLVAIDSLLSGIMDKSIQLDS------- 325
+ +D G LV L K N+ + + ++ S DS
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435
Query: 326 ---------AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+++ C + D A + + Y ALI K
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTA 433
E+ +MTK G+ V+ LI R+ R A K+ S + +D CT TYTA
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS-CTPNVVTYTA 554
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+I G ++KALK+ M KG P++ T+ L+ GL K G++
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/505 (19%), Positives = 181/505 (35%), Gaps = 46/505 (9%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGF 62
+++ + ++ DS +D LK+ + T N QVL + ++ + +S S GF
Sbjct: 14 ASLRRTCSHAAGDS-EDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSES-GF 71
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
DRFT + R + ++++ + +D V T ++ L A D A++
Sbjct: 72 CMDRFTVGCFAHALCKEGRWAD---ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMS 128
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
M+ C P +V+Y + ++ + M+ G PN + L+
Sbjct: 129 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC 188
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE--TRTIILILRYMKENRLALR 240
Y A ++ ++M G P NI I C + + ++ + + LA
Sbjct: 189 NEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN 248
Query: 241 YPVFKEALQTFKVA----DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ K + F + D + F+ D V T + +++
Sbjct: 249 CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 308
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+L K V D + +I +DS + +IE A FE +
Sbjct: 309 LLFQEMKMVGVTPD-----VYTYTILIDSFCKAGLIE---------QAQWLFEEMRSVGC 354
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y ALI +K P+ +I M AG L+ L A A +
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414
Query: 417 IFSLL--------------PEDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCRKG 458
+++ L ED+ A TY AL+ A D A ++ M G
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAE 483
P+ ++ L+ G K G++ A+
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQ 499
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
I G +K + + E M+ G A Y ++ S AG ++ A+ + +EM P
Sbjct: 661 IQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME---VP 717
Query: 135 TIVS-----YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ V Y + ++ L L +V+EA +Y EM +RG P + L++ LV K++E
Sbjct: 718 SSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDE 777
Query: 190 ALEIFSKMQEAGVQ 203
AL++ + GV
Sbjct: 778 ALQLCYGICHEGVN 791
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
W+SA+ LLK + +K SY +++L + +KA+ + S G DR Y
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYN 408
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
M+D FG+ + F M+E+GI D VT+ +++ G D A ++EEM+
Sbjct: 409 VMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRES 468
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P +Y + +L + + + EM ++GL PN TYT L++ R+G+Y+EA
Sbjct: 469 NCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEA 528
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++ M+ G++P + L+ + G + +++ MK + L + V +
Sbjct: 529 IDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINA 588
Query: 251 F 251
F
Sbjct: 589 F 589
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 164/400 (41%), Gaps = 29/400 (7%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
++E + DA ++ ++ + A D A+ + + P + TA + L R
Sbjct: 219 LRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGR 278
Query: 152 VKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
V EA ++ E G + P Y L++ VR G + A ++ +M + GV PD+A +
Sbjct: 279 VAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYS 338
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ----VHP 266
+L++ +AG + ++L+ M+ + + VF L F+ D D WQ V
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR--DRGD---WQKAFAVLR 393
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLD 324
+ + + V D G K N + A+D+ + + ++ I+ D
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFG--------------KYNCLGHAMDA-FNKMREEGIEPD 438
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+T+I+ +C R D A FE + + T Y +I +L + + V ++
Sbjct: 439 VVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLS 498
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
EM + G + L+ G + R A + D + Y AL+ Y G
Sbjct: 499 EMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRG 558
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
AD AL + K M G+ S+ N L+ + RV +A
Sbjct: 559 LADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEA 598
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 13/181 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + TYTT++D++G + R E M+ G+ Y ++++ + G
Sbjct: 501 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 560
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+N+ + MK +I+ + + + RV EA V + M + GL P+ TYT L
Sbjct: 561 DHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTL 620
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M+ L+R ++++ I+ +M +G PD+ A +L ++G L+Y+K R+
Sbjct: 621 MKALIRVEQFDKVPVIYEEMITSGCAPDRKARAML-----RSG--------LKYIKHMRV 667
Query: 238 A 238
A
Sbjct: 668 A 668
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 134/331 (40%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D + A R S + + + M+ G+ + ++ ++ + GD A
Sbjct: 329 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 388
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P Y + + + A D + +M + G+ P+ T+ L++
Sbjct: 389 FAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDA 448
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+++ A E+F +M+E+ P NI+I + + +L MKE L
Sbjct: 449 HCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPN 508
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-LSIDQGLVLI 299
+ + + S + D +E + D P ++ LV
Sbjct: 509 IITYTTLVDVYGR---------------SGRYKEAIDCIEAMKADGLKPSPTMYHALVNA 553
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
++ +++ + +++ V++++I + RR A ++ + L +
Sbjct: 554 YAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPD 613
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
Y L+ LI++ F KV I EEM +G
Sbjct: 614 VITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 188/468 (40%), Gaps = 27/468 (5%)
Query: 33 SYTVNQVLKTHPPMEKAWL--FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
S+ + +L T P + A L + SR D ++ ++ F A + +
Sbjct: 194 SHLLASLLNTRDPPDAALLERLLGDLRESR-LEPDAPLFSDLISAFARAALPDAALELLA 252
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLN 149
Q G+ + T+++ L AG V A ++ E L E P +Y A +K
Sbjct: 253 SAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRI 312
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+K A V EM Q G+ P+ TY++L++ RAG++E A + +M+ GV+P
Sbjct: 313 GSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF 372
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLAL-------------RYPVFKEALQTF-KVAD 255
+ ++ G+ + +LR M+ + + +Y A+ F K+ +
Sbjct: 373 SRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMRE 432
Query: 256 EN---DSLLWQVHPQFSPEFISDNDAVEFVTTDIEG---PLSIDQGLVLILL-KKKNLVA 308
E D + W + + A E E P + +++ LL ++++
Sbjct: 433 EGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEG 492
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++++LS + ++ + + +T+++V R A+ E L T Y AL+
Sbjct: 493 VEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVN 552
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
+ +V+ M G + + + LI+ G RR V A + + E+ +
Sbjct: 553 AYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRP 612
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
TYT L+ DK IY+ M G P +L +GL+
Sbjct: 613 DVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLK 660
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 182/433 (42%), Gaps = 61/433 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A F+ + RGF D TY +++ F +A ++ + + + M + + D VTY
Sbjct: 61 LDEALKIFDGAVK-RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR-VKEATDVYKEMIQ 164
S+++ L G VD A + + K P +++Y+ + L R V EA ++ +++
Sbjct: 120 SLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+G P TY +L++ L++ + EA E+FS + + G++PD + I+ CKAG
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
+L+L+ M E P+ +S N +
Sbjct: 237 ALLMLKDMDEKGCV-------------------------------PDVVSHNAVING--- 262
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
L K+K + + LLSG+ K ++ +T+I C + A
Sbjct: 263 ---------------LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 307
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV---EEMTKAGHSLGVYLGALL 401
+ F+ +K + Y L+ L K ++ E + + M + G V + L
Sbjct: 308 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 367
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKG 458
I LG A + A ++ + E + C TY +LI D+AL+++ M KG
Sbjct: 368 IDGLGKAGKLDDARRLLGAM-EAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKG 426
Query: 459 IHPSLGTFNVLLA 471
P T+ +++
Sbjct: 427 CVPDTITYGTIIS 439
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 150/359 (41%), Gaps = 29/359 (8%)
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
+P ++Y A + L R+ +A +Y+ MI+ G P+ TY L+ + G+ +EAL+
Sbjct: 7 WPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALK 66
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQ 249
IF + G PD N LI CKA + IL+ M L + Y L
Sbjct: 67 IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLC 126
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
DE L+ V FSP I+ + + + ++ G + + L
Sbjct: 127 KNGRVDEARMLI--VDKGFSPNVITYSTLISGLCRELRG---VSEAL------------- 168
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
L ++ + + + + +I+ R + A F VK L + Y I
Sbjct: 169 -KLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG 227
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
L K ++++M + G V +I+ L +R A + S + E + C+
Sbjct: 228 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM-EAKGCSP 286
Query: 430 ---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL---GRVSDA 482
++ LI AG KA+ +K M ++G+ P++ T+N+L+ GL K GR+ +A
Sbjct: 287 NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 172/452 (38%), Gaps = 65/452 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R GF +R TY +L R+S + ++E M + G + D VTY +++H G++
Sbjct: 2 RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGEL 61
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D EA ++ ++RG P+ TY L
Sbjct: 62 D-----------------------------------EALKIFDGAVKRGFVPDVVTYNAL 86
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKE 234
+ +A K +EA I +M + PD N L+ CK G E R +I+ +
Sbjct: 87 INGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPN 146
Query: 235 NRLALRYPVFKEAL-QTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTD--IEGPL 290
+ Y L + + E L V Q + PE + N ++ + + +
Sbjct: 147 ---VITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAF 203
Query: 291 SIDQGLVLILLKKKNL---VAIDSL------------LSGIMDKSIQLDSAVISTIIEVN 335
+ GLV L+ + V ID L L + +K D + +I
Sbjct: 204 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 263
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C +R D A + + ++ LI + + K +EM K G V
Sbjct: 264 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 323
Query: 396 YLGALLIHRLGSAR---RPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKI 450
+L+ L AR R A +F + E + TY+ALI AG D A ++
Sbjct: 324 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 383
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M KG P++ T+N L++GL L +V +A
Sbjct: 384 LGAMEAKGCIPNVYTYNSLISGLCGLEKVDEA 415
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
R Y AL+ L + E M KAG+S V L+H A KIF
Sbjct: 10 RITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFD 69
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+P+ TY ALI + A D+A +I + M + + P + T+N L+ GL
Sbjct: 70 GAVKRGFVPD----VVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125
Query: 474 EKLGRVSDAEI 484
K GRV +A +
Sbjct: 126 CKNGRVDEARM 136
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 177/425 (41%), Gaps = 62/425 (14%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FT+++M+ +A ++ + VF+ M E G++ D TY +++ L G ++ +W
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M C IVSY ++ L N +V++A ++ + +RGL + TY +L+ L +
Sbjct: 349 NVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKN 407
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G +AL I + + G D A + ++ CK G + ++ MK+NR L VF
Sbjct: 408 GYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVF 467
Query: 245 KEAL----QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + FK+ + L +P +S N T I G L
Sbjct: 468 NSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYN-------TIING-----------L 509
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K + L ++++ ++ D S +I+ C + D AL + + L +
Sbjct: 510 CKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPD- 568
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+ + ++IH L +A++ A +IF+
Sbjct: 569 ----------------------------------LQMHNIIIHGLCTAQKVDVALEIFTQ 594
Query: 421 LPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ + C T+ ++ + AG +ALKI+ + G+ P + ++N+ GL
Sbjct: 595 MRQ-VNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCA 653
Query: 478 RVSDA 482
RVSDA
Sbjct: 654 RVSDA 658
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/500 (20%), Positives = 215/500 (43%), Gaps = 71/500 (14%)
Query: 4 TISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAW----------LFF 53
+S + K S D A +L +N+ D + N +++ M A+ LFF
Sbjct: 81 ALSAIKAYAKCSMPDQALNLFQNMV---DIFGCNPGIRSFNSMLNAFIESNQWREAELFF 137
Query: 54 NWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSN 113
+ ++ G + + TY ++ I + ++ K + M E G+N D ++Y ++++ L+
Sbjct: 138 TYF-QTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAK 196
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI-QRGLPPNCY 172
+G++ AV +++EM ++ P ++ Y + +A +++K ++ + + P+
Sbjct: 197 SGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVE 256
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY +++ L + GK +E++E++++M++ PD + +I KAG + + M
Sbjct: 257 TYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEM 316
Query: 233 KENRLALRYPVFKEALQT-FKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
E+ L+ + L F+ N LW V +S N+
Sbjct: 317 IESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNV--------MSKNNCC----------- 357
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
N+V+ + L+ G++ D+++ + A+ ++
Sbjct: 358 --------------NIVSYNMLIQGLL-------------------DNKKVEQAICYWQL 384
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ L + T Y LI L K K I+EE G L + + ++H L
Sbjct: 385 LHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGM 444
Query: 411 PVPAAKIFSLLPEDQK--CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A ++ + ++++ + + +LI Y A ++A+ + + M K P++ ++N
Sbjct: 445 LEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNT 504
Query: 469 LLAGLEKLGRVSDAEIYRKE 488
++ GL K R SDA + KE
Sbjct: 505 IINGLCKAERFSDAYLSLKE 524
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y T+++ +A+R S + M E+G+ D +TY+ ++ L VD A+N+W +
Sbjct: 501 SYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQC 560
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + + + L +V A +++ +M Q P+ T+ +ME L +AG
Sbjct: 561 INKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDC 620
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
EAL+I+ ++ EAG+QPD + NI + C I L
Sbjct: 621 VEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFL 662
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 91/178 (51%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+ + G + D F Y++M+ + + + M++ +++ + S+++ A
Sbjct: 420 AENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFK 479
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ A+++ EMK K+C PT+VSY + L +R +A KEM++ GL P+ TY++
Sbjct: 480 LEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSL 539
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L++ L R K + AL ++ + ++PD NI+I C A + + I M++
Sbjct: 540 LIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQ 597
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 71/153 (46%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D +++ ++ K + D + ++H L A VD A
Sbjct: 529 GLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVA 588
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I+ +M+ C P +V++ M+ L+ EA ++ +++ GL P+ +Y + +
Sbjct: 589 LEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKG 648
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L + +A+E + G+ P+ N+L+
Sbjct: 649 LCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ K + +N +S++ N +Y ++ + K++ ++L+ E+G+ D+ TY
Sbjct: 341 LNKCFELWNVMSKNNCCN--IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYG 398
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L G ++ A+ I EE + + +Y++ + L +++A ++ +M +
Sbjct: 399 LLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKN 458
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
N + + L+ VRA K EEA+ + +M+ P + N +I CKA
Sbjct: 459 RRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDA 518
Query: 226 ILILRYMKENRL 237
L L+ M E L
Sbjct: 519 YLSLKEMLEEGL 530
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
++LK A F+ + G+ H F + +L + K + + + +LM+ +
Sbjct: 15 KLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRC 74
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEAT 156
S + + D A+N+++ M + C P I S+ + + +++ +EA
Sbjct: 75 TCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAE 134
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ G+ PN TY +L++ + ++E+ + + M E G+ PD + LI
Sbjct: 135 LFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINAL 194
Query: 217 CKAG 220
K+G
Sbjct: 195 AKSG 198
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%)
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A+++ +F M++ D VT+ ++M L AGD A+ IW+ + P I+S
Sbjct: 582 AQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIIS 641
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
Y K L RV +A + + + RG+ PN T+ VL+ +V
Sbjct: 642 YNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVV 685
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 193/468 (41%), Gaps = 90/468 (19%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
F Y ++ + KRI + +F M + + + VT+ +++ AG+VD A+ + E
Sbjct: 102 FVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRER 161
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEAT------------------------------ 156
MK ++ P+I+++ + + L R++EA
Sbjct: 162 MKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDD 221
Query: 157 ------DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
D+Y+E I +G+ + YT ++L+ L + GK E+A E+ + E G+ P + N
Sbjct: 222 GAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYN 281
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQ-VHP 266
++ C+ G+ IL + M+ L F + F ++ D+ + + + V
Sbjct: 282 TIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGK 341
Query: 267 QFSPEFISDN----------------DAVEFVTTDIEGPLSIDQG-LVLILLKKKNLVAI 309
+P + N +E + + E P I G L+ L K ++
Sbjct: 342 GIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEA 401
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+ +L ++ + + ++ + + +I+ +C + AL F+ K + Y +LI
Sbjct: 402 EMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKG 461
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
L K+ + E+ +T GH V
Sbjct: 462 LCKMGKLKEAEEMFFLITSTGHCPDVI--------------------------------- 488
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
TY +LI Y +AG++ K L++Y+TM + G+ P++ TF+ L++G K G
Sbjct: 489 TYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG 536
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 196/479 (40%), Gaps = 52/479 (10%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINID 100
K H + + + F R F + R +++ E+K+ ++ +F+ M G D
Sbjct: 10 KMHSQVSELYDFMRQEGRLPSFGYVRMIVESLV----ESKKFDNVLDLFKEMVGLGFRPD 65
Query: 101 AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK 160
+ Y M GD+ A+ ++E MK ++ P + Y + L R+++A ++
Sbjct: 66 KLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFG 125
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
EM R L PN T+ L++ +AG+ + A+ + +M++ V+P N L+ CKA
Sbjct: 126 EMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKAR 185
Query: 221 ETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
+L +K N Y + + L K D + L DN
Sbjct: 186 RIEEARCMLNEIKCNGFVPDGFTYSIIFDGL--LKSDDGAGAALDLYREAIGKGVKIDNY 243
Query: 278 AVEFVTTDI--EGPLS---------IDQGLVLILLKKKNLVAIDSLLSGI-----MDKSI 321
+ + EG + ++ GLV V +++++G MD++I
Sbjct: 244 TCSILLNGLCKEGKVEKAEEVLKSLVEHGLV------PGEVIYNTIVNGYCQIGDMDRAI 297
Query: 322 ----QLDSA-------VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
Q++S +++I+ C+ + D A + V + Y LI
Sbjct: 298 LTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGY 357
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPED 424
+L F + +I+EEM + G V LI+ L + + A + +LP
Sbjct: 358 GRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPN- 416
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y LI + G +AL+ + M + GI ++ T+N L+ GL K+G++ +AE
Sbjct: 417 ---ANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 173/448 (38%), Gaps = 69/448 (15%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A L + SRG + + +++D F E + I + + M KGI TY
Sbjct: 293 MDRAILTIEQM-ESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYN 351
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ I EEM+ P ++SY + + L + ++ EA V ++M+ R
Sbjct: 352 ILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGR 411
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN Y +L++ GK EAL F +M + G+ N LI+ CK G+
Sbjct: 412 GVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK---- 467
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT- 284
KEA + F P+ I+ N + +
Sbjct: 468 ------------------LKEAEEMF---------FLITSTGHCPDVITYNSLISGYSNA 500
Query: 285 -DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ + L + + + + L K + L+SG + I+L +
Sbjct: 501 GNSQKCLELYETMKKLGL-KPTINTFHPLISGCSKEGIKLKETL---------------- 543
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG--------HSLGV 395
F ++M+L+ +R Y A+I + K + +EM G +SL
Sbjct: 544 ----FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSL-- 597
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
LG L +L + V K L+PE TY+ LI + + A Y+ M
Sbjct: 598 ILGHLKEGKLSETKDLVDDMKAKGLIPE----ADTYSLLIQGHCDLKDFNGAYVWYREML 653
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G P++ N L GL K GR+ +A+
Sbjct: 654 ENGFLPNVCICNELSTGLRKDGRLQEAQ 681
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 191/440 (43%), Gaps = 34/440 (7%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS-VMHWLSNAGDVDGAVNIWEEMKLK 130
+L + E+K S + +++ M+++G + + Y ++ L + D +++++EM
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEG-RLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 131 ECYPTIVSYT-AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
P + Y A + + L D +K A ++++ M +R + PN + Y VL+ L + + +
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGD-LKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRD 119
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A ++F +M + P++ N LI+ CKAGE I + MK+ ++ F L
Sbjct: 120 AEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLS 179
Query: 250 TFKVA---DENDSLLWQVHPQ-FSPE----------FISDND----AVEFVTTDIEGPLS 291
A +E +L ++ F P+ + +D A++ I +
Sbjct: 180 GLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVK 239
Query: 292 IDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
ID ILL K+ + + +L +++ + + +TI+ C D A+L
Sbjct: 240 IDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILT 299
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
E L A+ ++I ++ K E V++M G + V +LI G
Sbjct: 300 IEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYG- 358
Query: 408 ARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
R ++ F +L E ++ +Y +LI G +A + + M +G+ P+
Sbjct: 359 --RLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPN 416
Query: 463 LGTFNVLLAGLEKLGRVSDA 482
+N+L+ G +G++ +A
Sbjct: 417 ANIYNMLIDGSCTVGKLREA 436
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ I+E + ++ D L F+ V + ++ Y + +KL E+ E M
Sbjct: 34 VRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMK 93
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSA 441
+ V++ +LI L +R A K+F +L+P T+ LI Y A
Sbjct: 94 RRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPN----RVTFNTLIDGYCKA 149
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
G D A+ + + M ++ + PS+ TFN LL+GL K R+ +A E K
Sbjct: 150 GEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIK 198
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 145/344 (42%), Gaps = 29/344 (8%)
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+ +++Y M Q G P+ +++E LV + K++ L++F +M G +PDK +
Sbjct: 14 QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73
Query: 214 EKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FS 269
K G+ + + + MK ++ Y V L K + + L ++ +
Sbjct: 74 LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK---NLVAIDSLLSGIMDKSIQLDSA 326
P ++ N ++ G + + GL + K+K +++ +SLLSG+ K+ +++ A
Sbjct: 134 PNRVTFNTLIDGYCK--AGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLC-KARRIEEA 190
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+ E+ C+ DG F YS+ D G+L + ++ E
Sbjct: 191 R-CMLNEIKCNGFVPDG----FTYSIIFD------------GLLKSDDGAGAALDLYREA 233
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALIGVYFSAGSA 444
G + Y ++L++ L + A ++ L E Y ++ Y G
Sbjct: 234 IGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDM 293
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
D+A+ + M +G+ P+ FN ++ ++ + AE + K+
Sbjct: 294 DRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKK 337
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
DR Y M+ + E + + + M + G+ D TY S++ G + ++
Sbjct: 555 DRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLV 614
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++MK K P +Y+ ++ A Y+EM++ G PN L L +
Sbjct: 615 DDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKD 674
Query: 185 GKYEEALEIFSKMQEAGV 202
G+ +EA I S+M G+
Sbjct: 675 GRLQEAQSICSEMIANGM 692
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 170/408 (41%), Gaps = 40/408 (9%)
Query: 89 FELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
F+L++E KG D TY+ V+ +L +A V+ A +++EMK+ P + +YT +
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+++A +++EM G P TYT L+ ++A + +A +IF +M +AG +P+
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
L++ CKAG ++ + V+ + + T AD + +
Sbjct: 393 DVTYGALVDGLCKAGN---------------ISKAFEVYAKLIGTSDSADSDFYFPCEDR 437
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
+P ++ LV L K + LL ++ + +
Sbjct: 438 HTLAPNVVTYG------------------ALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
V +I+ C + D A F K Y +LI + K +++ +
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAG 442
M K + V +I L A K+ SL+ E++ C+ TYTALI AG
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM-EEKGCSPNVVTYTALIDGLGKAG 598
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
D +L ++ M RKG P+ T+ VL+ L G + A + E K
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 156/342 (45%), Gaps = 23/342 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + Y ++D F +A +I S + VF M + G TYTS++ + G +D
Sbjct: 472 SSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLD 531
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +M C P +V+YTA + L ++A + M ++G PN TYT L+
Sbjct: 532 LAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L +AGK + +L++F++M G P+ +LI C AG L+L MK+
Sbjct: 592 DGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT--- 648
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+P + LQ ++ A + FS FI+ +E + + P++ G+++
Sbjct: 649 -YWPKY---LQGYRCAIQG----------FSKSFIASLGILEEMESYGTVPIAPVYGMLI 694
Query: 299 ILLKKKNLVAIDSLLSGIM---DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K + I L M S++ D+ + +++I+ C + + A + +
Sbjct: 695 DCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRG 754
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
E + ++ LI L+++ + + ++ + H +G+ L
Sbjct: 755 FVPELSVFVCLIKGLVEVKKWDEALQLCYGIC---HEVGLLL 793
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 23/227 (10%)
Query: 17 WDSAQDLLKNLPIKW---DSYTVNQVLK--THPP-MEKAWLFFNWVSRSRGFNHDRFTYT 70
+D A L+K + K D+ T ++V+ H +EKA+L F + + G D +TYT
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-KMVGVTPDVYTYT 327
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
++D F +A I +++FE M+ G + VTYT+++H A V A +I+ M
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI----------------QRGLPPNCYTY 174
C P V+Y A + L + +A +VY ++I + L PN TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L++ L +A K + A E+ M +G +P+ + LI+ CKAG+
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 195/526 (37%), Gaps = 63/526 (11%)
Query: 9 YKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH---- 64
+ + K W A D+++ K D+ VL TH M + ++ + F H
Sbjct: 83 HALCKEGRWADALDMIEREDFKLDT-----VLCTH--MISGLMEASYFDEAMSFLHRMRC 135
Query: 65 -----DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ TY T+L F + K++ K + +M +G N + + S++H N D
Sbjct: 136 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE------ATDVYKEMIQRGLPPNCYT 173
A + M C P V Y ++ + +++ A +Y EM+ N
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
L GK+++A ++ +M G PD + + +I C A + L+ + MK
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ----FSPEFISDNDAVEFVTTDIEGP 289
+ + + +F A + W SP ++ + + P
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 375
Query: 290 LS-------IDQG----------LVLILLKKKNLVAIDSLLSGIMDKSIQLDS------- 325
+ +D G LV L K N+ + + ++ S DS
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435
Query: 326 ---------AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+++ C + D A + + Y ALI K
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTA 433
E+ +MTK G+ V+ LI R+ R A K+ S + +D CT TYTA
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS-CTPNVVTYTA 554
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+I G ++KALK+ M KG P++ T+ L+ GL K G++
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 99/505 (19%), Positives = 181/505 (35%), Gaps = 46/505 (9%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGF 62
+++ + ++ DS +D LK+ + T N QVL + ++ + +S S GF
Sbjct: 14 ASLRRTCSHAAGDS-EDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSES-GF 71
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
DRFT + R + ++++ + +D V T ++ L A D A++
Sbjct: 72 CMDRFTVGCFAHALCKEGRWAD---ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMS 128
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
M+ C P +V+Y + ++ + M+ G PN + L+
Sbjct: 129 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYC 188
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE--TRTIILILRYMKENRLALR 240
Y A ++ ++M G P NI I C + + ++ + + LA
Sbjct: 189 NEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN 248
Query: 241 YPVFKEALQTFKVA----DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ K + F + D + F+ D V T + +++
Sbjct: 249 CVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 308
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+L K V D + +I +DS + +IE A FE +
Sbjct: 309 LLFQEMKMVGVTPD-----VYTYTILIDSFCKAGLIE---------QAQWLFEEMRSVGC 354
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y ALI +K P+ +I M AG L+ L A A +
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414
Query: 417 IFSLL--------------PEDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCRKG 458
+++ L ED+ A TY AL+ A D A ++ M G
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAE 483
P+ ++ L+ G K G++ A+
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQ 499
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 7/241 (2%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
W+SA+ LLK + +K SY +++L + +KA+ + S G DR Y
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYN 408
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
M+D FG+ + F+ M+E+ I D VT+ +++ G D A+ ++EEM+
Sbjct: 409 VMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRES 468
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P +Y + +L +R + + EM ++GL PN TYT L++ R+G+Y+EA
Sbjct: 469 NCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEA 528
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++ M+ G++P + L+ + G + +++ MK + L + V +
Sbjct: 529 IDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINA 588
Query: 251 F 251
F
Sbjct: 589 F 589
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 164/400 (41%), Gaps = 29/400 (7%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
++E + DA ++ ++ + A D A+ + + P + TA + L R
Sbjct: 219 LRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGR 278
Query: 152 VKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
V EA ++ E G + P Y L++ VR G + A ++ +M + GV PD+A +
Sbjct: 279 VAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYS 338
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ----VHP 266
+L++ +AG + ++L+ M+ + + VF L F+ D D WQ V
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR--DRGD---WQKAFAVLR 393
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLD 324
+ + + V D G K N + A+D+ + ++ I+ D
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFG--------------KYNCLGHAMDA-FDRMREEEIEPD 438
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+T+I+ +C R D A+ FE + + T Y +I +L + + V ++
Sbjct: 439 VVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLS 498
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
EM + G + L+ G + R A + D + Y AL+ Y G
Sbjct: 499 EMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRG 558
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
AD AL + K M G+ S+ N L+ + RV +A
Sbjct: 559 LADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEA 598
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + TYTT++D++G + R E M+ G+ Y ++++ + G
Sbjct: 501 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 560
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+N+ + MK +I+ + + + RV EA V + M + GL P+ TYT L
Sbjct: 561 DHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTL 620
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M+ L+R ++++ I+ +M +G PD+ A +L LRYMK R+
Sbjct: 621 MKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSA-------------LRYMKHMRV 667
Query: 238 A 238
A
Sbjct: 668 A 668
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 133/331 (40%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D + A R S + + + M+ G+ + ++ ++ + GD A
Sbjct: 329 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 388
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P Y + + + A D + M + + P+ T+ L++
Sbjct: 389 FAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDA 448
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+++ A+E+F +M+E+ P NI+I + + +L MKE L
Sbjct: 449 HCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPN 508
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-LSIDQGLVLI 299
+ + + S + D +E + D P ++ LV
Sbjct: 509 IITYTTLVDVYGR---------------SGRYKEAIDCIEAMKADGLKPSPTMYHALVNA 553
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
++ +++ + +++ V++++I + RR A ++ + L +
Sbjct: 554 YAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPD 613
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
Y L+ LI++ F KV I EEM +G
Sbjct: 614 VITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 180/455 (39%), Gaps = 27/455 (5%)
Query: 33 SYTVNQVLKTHPPMEKAWL--FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
S+ + +L T P + A L + SR D ++ ++ F A + +
Sbjct: 194 SHLLASLLNTRDPPDAALLERLLGDLRESR-LEPDAPLFSDLISAFARAALPDAALELLA 252
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLN 149
Q G+ + T+++ L +AG V A ++ E L E P +Y A +K
Sbjct: 253 SAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRI 312
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+K A V EM Q G+ P+ TY++L++ RAG++E A + +M+ GV+P
Sbjct: 313 GSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF 372
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK----VADENDSLLWQVH 265
+ ++ G+ + +LR M+ + + + + TF + D+
Sbjct: 373 SRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMRE 432
Query: 266 PQFSPEFISDNDAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+ P+ ++ N + E ++ + ++ +L +++
Sbjct: 433 EEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEG 492
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++++LS + ++ + + +T+++V R A+ E L T Y AL+
Sbjct: 493 VEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVN 552
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
+ +V+ M G + + + LI+ G RR V A + + E+ +
Sbjct: 553 AYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRP 612
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
TYT L+ DK IY+ M G P
Sbjct: 613 DVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 647
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 7/245 (2%)
Query: 13 KYSTWDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDR 66
+ W+SA+ LLK + +K SY +++L + +KA+ + S G DR
Sbjct: 353 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS-GVQPDR 411
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
Y M+D FG+ + F M+E+GI D VT+ +++ G D A+ ++EE
Sbjct: 412 HFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEE 471
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M+ C P +Y + +L +R + EM ++GL PN TYT L++ R+G+
Sbjct: 472 MRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGR 531
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++EA+E M+ G++P + L+ + G + +++ M+ + L V
Sbjct: 532 FKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 591
Query: 247 ALQTF 251
+ F
Sbjct: 592 LMNAF 596
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 178/437 (40%), Gaps = 32/437 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM---QEKGINIDAVTYTSVMHWLSNA 114
R GF D +Y+ +L + + L+ +E + DA ++ ++ + A
Sbjct: 189 REHGFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFARA 248
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYT 173
D A+++ + P + TA + L RV EA ++ E G + P
Sbjct: 249 ALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRA 308
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
Y L++ V+ G + A ++ +M + GV PD+A ++L++ +AG + ++L+ M+
Sbjct: 309 YNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 368
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQ----VHPQFSPEFISDNDAVEFVTTDIEGP 289
+ + VF L F+ D D WQ V + + + V D G
Sbjct: 369 ADGVKPSSYVFSRILAGFR--DRGD---WQKAFAVLREMHASGVQPDRHFYNVMIDTFG- 422
Query: 290 LSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
K N + A+D+ + + ++ I+ D +T+I+ + R D A+
Sbjct: 423 -------------KYNCLGHAMDA-FNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMEL 468
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
FE + + T Y +I +L + + V ++ EM + G + L+ G
Sbjct: 469 FEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGR 528
Query: 408 ARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+ R A + ++ D + Y AL+ Y G AD AL + K M G+ S
Sbjct: 529 SGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVV 588
Query: 466 FNVLLAGLEKLGRVSDA 482
N L+ + RV +A
Sbjct: 589 LNSLMNAFGEDRRVVEA 605
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 134/331 (40%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D + A R S + + + M+ G+ + ++ ++ + GD A
Sbjct: 336 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 395
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM P Y + + + A D + M + G+ P+ T+ L++
Sbjct: 396 FAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDA 455
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+++ A+E+F +M+E+ P NI+I + + +L MKE L
Sbjct: 456 HRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPN 515
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-LSIDQGLVLI 299
+ + + S F + +E + D P ++ LV
Sbjct: 516 IITYTTLVDVYGR---------------SGRFKEAIECIEVMKADGLKPSPTMYHALVNA 560
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
++ +++ + ++ + V+++++ + RR A ++ + DL +
Sbjct: 561 YAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPD 620
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
Y L+ LI++ F KV I EEM +G
Sbjct: 621 VITYTTLMKALIRIEQFDKVPVIYEEMITSG 651
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + TYTT++D++G + R E+M+ G+ Y ++++ + G
Sbjct: 508 KEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLA 567
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+N+ + M+ + V + M + RV EA V + M + L P+ TYT L
Sbjct: 568 DHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTL 627
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M+ L+R ++++ I+ +M +G PD+ A +L LRYMK ++
Sbjct: 628 MKALIRIEQFDKVPVIYEEMITSGCAPDRKARAMLRSA-------------LRYMKYTKV 674
Query: 238 A 238
A
Sbjct: 675 A 675
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 176/455 (38%), Gaps = 27/455 (5%)
Query: 33 SYTVNQVLKTHPPMEKAWL--FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
S+ + +L T P + A L + SR D ++ ++ F A + +
Sbjct: 201 SHLLASLLNTRDPPDAAILERLLGDLRESR-LEPDAPLFSDLISAFARAALPDAALDLLA 259
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLN 149
Q G+ + T+++ L AG V A ++ E L E P +Y A +K
Sbjct: 260 SAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKI 319
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+K A V EM G+ P+ TY++L++ RAG++E A + +M+ GV+P
Sbjct: 320 GSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF 379
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLAL-------------RYPVFKEALQTFKVADE 256
+ ++ G+ + +LR M + + +Y A+ F E
Sbjct: 380 SRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMRE 439
Query: 257 N----DSLLWQVHPQFSPEFISDNDAVEFVTTDIEG---PLSIDQGLVLILL-KKKNLVA 308
D + W + + A+E E P + +++ LL +++ V
Sbjct: 440 EGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVG 499
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++++LS + ++ + + +T+++V R A+ E L T Y AL+
Sbjct: 500 VETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVN 559
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
+ +V+ M G + L++ G RR V A + + E+ +
Sbjct: 560 AYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRP 619
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
TYT L+ DK IY+ M G P
Sbjct: 620 DVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAP 654
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 169/426 (39%), Gaps = 51/426 (11%)
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+LD +A+R +F+ M +G+ VTY ++++ G V A +W++M
Sbjct: 147 NAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVA 206
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
++ P +++YT+ + +L + +A ++ M + G+ PN YTY VLM +
Sbjct: 207 RQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNS 266
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A ++ ++ +G+ P+ LI+ CKA + R M +A PV+ +
Sbjct: 267 AFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMD 326
Query: 250 -TFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
F+ D ++L L+Q + D V + D G + + +
Sbjct: 327 GAFRSGDAQEALSLYQEMTRLG--LCPDEFTCSIVVRGL-----CDGGQIQVAAR----- 374
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
L G+ + + L++A + +I+ C + + AL ++ + +Y +LI
Sbjct: 375 ----FLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLI 430
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
KL I EM G V
Sbjct: 431 DGHSKLGKMQIAMAIYTEMVAKGIEPNV-------------------------------- 458
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
TYTALI + G D A + +K M GI P+ T +VL+ GL + RV DA +
Sbjct: 459 -VTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVM 517
Query: 488 EKKSIQ 493
E I+
Sbjct: 518 EHSGIK 523
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 90/181 (49%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+R + + TYT+M+ + E I + +F+ M+E G+ + TY +M DV+
Sbjct: 206 ARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVN 265
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++E+ P V +T + R EA D++++M + G+ P Y LM
Sbjct: 266 SAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLM 325
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ R+G +EAL ++ +M G+ PD+ C+I++ C G+ + L ++E+ +
Sbjct: 326 DGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVN 385
Query: 239 L 239
L
Sbjct: 386 L 386
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 4/214 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D +K ++ + YT N ++ H + A++ + + S G + +TT++D F +
Sbjct: 237 DAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNS-GLIPNAVVFTTLIDGFCK 295
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
AKR S K +F M G+ Y S+M +GD A+++++EM P +
Sbjct: 296 AKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFT 355
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ ++ L +++ A + + + G+ N Y L++ R G EEAL ++M
Sbjct: 356 CSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMT 415
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
E GV+P+ + + LI+ K G+ + + I M
Sbjct: 416 EVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEM 449
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FT + ++ + +I E ++E G+N++A Y +++ G+++ A
Sbjct: 348 GLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEA 407
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ M P +VSY++ + +++ A +Y EM+ +G+ PN TYT L+
Sbjct: 408 LATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 467
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G + A +M E G+ P+ ++L++ C+ + + R++ E+ ++
Sbjct: 468 HAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAV---RFVMEHS-GIK 523
Query: 241 YPVFKEALQTFKVADE 256
Y F +E
Sbjct: 524 YSDIHSFFSNFTTEEE 539
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 84/174 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +++TY ++ + ++S +++ + G+ +AV +T+++ A A
Sbjct: 243 GMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEA 302
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ +M PT+ Y + M F + +EA +Y+EM + GL P+ +T ++++
Sbjct: 303 KDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRG 362
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L G+ + A ++E GV + AA N LI++ C+ G + M E
Sbjct: 363 LCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTE 416
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G N + Y ++D + + M E G+ + V+Y+S++ S G +
Sbjct: 380 REDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKM 439
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ I+ EM K P +V+YTA + N + A +KEMI+ G+ PN T +VL
Sbjct: 440 QIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVL 499
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQ 203
++ L R + ++A+ M+ +G++
Sbjct: 500 VDGLCRENRVQDAVRFV--MEHSGIK 523
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G + TYT ++ + I + + M E GI+ +A+T + ++ L V
Sbjct: 451 AKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQ 510
Query: 119 GAVN-IWEEMKLK-------------ECYPTIVSYTAYMKI---LFLNDRVKEATDVYKE 161
AV + E +K E P I + YM + L+L+ + EA ++
Sbjct: 511 DAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSY 570
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
M + G+ + +TYT+L+ G A+ +++ M + GV+P
Sbjct: 571 MRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
W+SA+ LLK + +K SY +++L + +KA+ + S G DR Y
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYN 408
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
M+D FG+ + F M+E+GI D VT+ +++ G D A ++EEM+
Sbjct: 409 VMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRES 468
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P +Y + +L + + + EM ++GL PN TYT L++ R+G+Y+EA
Sbjct: 469 NCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEA 528
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++ M+ G++P + L+ + G + +++ MK + L + V +
Sbjct: 529 IDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINA 588
Query: 251 F 251
F
Sbjct: 589 F 589
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 163/400 (40%), Gaps = 29/400 (7%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
++E + DA ++ ++ + A D A+ + + P + TA + L R
Sbjct: 219 LRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGR 278
Query: 152 VKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
V EA ++ E G + P Y L++ VR + A ++ +M + GV PD+A +
Sbjct: 279 VAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYS 338
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ----VHP 266
+L++ +AG + ++L+ M+ + + VF L F+ D D WQ V
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR--DRGD---WQKAFAVLR 393
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLD 324
+ + + V D G K N + A+D+ + + ++ I+ D
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFG--------------KYNCLGHAMDA-FNKMREEGIEPD 438
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+T+I+ +C R D A FE + + T Y +I +L + + V ++
Sbjct: 439 VVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLS 498
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
EM + G + L+ G + R A + D + Y AL+ Y G
Sbjct: 499 EMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRG 558
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
AD AL + K M G+ S+ N L+ + RV +A
Sbjct: 559 LADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEA 598
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 13/181 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + TYTT++D++G + R E M+ G+ Y ++++ + G
Sbjct: 501 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 560
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+N+ + MK +I+ + + + RV EA V + M + GL P+ TYT L
Sbjct: 561 DHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTL 620
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M+ L+R ++++ I+ +M +G PD+ A +L ++G L+Y+K R+
Sbjct: 621 MKALIRVEQFDKVPVIYEEMITSGCAPDRKARAML-----RSG--------LKYIKHMRV 667
Query: 238 A 238
A
Sbjct: 668 A 668
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 134/331 (40%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D + A R S + + + M+ G+ + ++ ++ + GD A
Sbjct: 329 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 388
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P Y + + + A D + +M + G+ P+ T+ L++
Sbjct: 389 FAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDA 448
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+++ A E+F +M+E+ P NI+I + + +L MKE L
Sbjct: 449 HCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPN 508
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-LSIDQGLVLI 299
+ + + S + D +E + D P ++ LV
Sbjct: 509 IITYTTLVDVYGR---------------SGRYKEAIDCIEAMKADGLKPSPTMYHALVNA 553
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
++ +++ + +++ V++++I + RR A ++ + L +
Sbjct: 554 YAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPD 613
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
Y L+ LI++ F KV I EEM +G
Sbjct: 614 VITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 188/468 (40%), Gaps = 27/468 (5%)
Query: 33 SYTVNQVLKTHPPMEKAWL--FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
S+ + +L T P + A L + SR D ++ ++ F A + +
Sbjct: 194 SHLLASLLNTRDPPDAALLERLLGDLRESR-LEPDAPLFSDLISAFARAALPDAALELLA 252
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLN 149
Q G+ + T+++ L AG V A ++ E L E P +Y A +K
Sbjct: 253 SAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRI 312
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+K A V EM Q G+ P+ TY++L++ RAG++E A + +M+ GV+P
Sbjct: 313 ASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF 372
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLAL-------------RYPVFKEALQTF-KVAD 255
+ ++ G+ + +LR M+ + + +Y A+ F K+ +
Sbjct: 373 SRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMRE 432
Query: 256 EN---DSLLWQVHPQFSPEFISDNDAVEFVTTDIEG---PLSIDQGLVLILL-KKKNLVA 308
E D + W + + A E E P + +++ LL ++++
Sbjct: 433 EGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEG 492
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++++LS + ++ + + +T+++V R A+ E L T Y AL+
Sbjct: 493 VEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVN 552
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
+ +V+ M G + + + LI+ G RR V A + + E+ +
Sbjct: 553 AYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRP 612
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
TYT L+ DK IY+ M G P +L +GL+
Sbjct: 613 DVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLK 660
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 189/462 (40%), Gaps = 39/462 (8%)
Query: 44 PPMEKAWLFFNWVSRSRGFN---------------HDRFTYTTMLDIFGEAKRISSMKYV 88
P + FF+ ++R++ FN H+ +T M++ F + V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+ + G D T+ +++ L G V AV + + M C P +V+Y + + +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ A D+ ++M +R + + +TY+ +++ L R G + A+ +F +M+ G++
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQV 264
N L+ CKAG+ L+L+ M + F L F K+ + N+ +
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
SP I+ N ++ G + + L +++L ++ D
Sbjct: 326 TRGISPNIITYNTLMD--------------GYCM----QNRLSEANNMLDLMVRNKCSPD 367
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+++I+ C +R D + F K L Y L+ + E+ +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAG 442
EM G V +L+ L + A +IF L + + YT +I G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ A ++ ++ KG+ P++ T+ V+++GL K G +S+A I
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 189/446 (42%), Gaps = 61/446 (13%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++++ + S + M+E+ + D TY++++ L G +D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++++EM+ K ++V+Y + ++ L + + + K+M+ R + PN T+ VL++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
V+ GK +EA E++ +M G+ P+ N L++ Y +NRL
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDG---------------YCMQNRL--- 349
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL---SIDQGL- 296
++ N+ L V + SP+ ++ T+ I+G +D G+
Sbjct: 350 -------------SEANNMLDLMVRNKCSPDIVT-------FTSLIKGYCMVKRVDDGMK 389
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
V + K+ LVA ++ S +++ C + A F+ V +
Sbjct: 390 VFRNISKRGLVA---------------NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y L+ L K EI E++ K+ LG+ + +I + + A
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+F LP + TYT +I GS +A + + M G P+ T+N L+
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 475 KLGRVSDAEIYRKEKKS--IQADALS 498
+ G ++ + +E KS ADA S
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASS 580
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F +S+ RG + TY+ ++ F ++ +I + +F+ M G+ D +TY ++ L
Sbjct: 391 FRNISK-RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ G ++ A+ I+E+++ + IV YT ++ + +V++A +++ + +G+ PN
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
TYTV++ L + G EA + KM+E G P+ N LI + G+
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY +LD + ++ +FE +Q+ +++ V YT+++ + G V+
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A N++ + K P +++YT + L + EA + ++M + G PN TY L+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+R G + ++ +M+ G D ++ ++I+ ++L MK RL
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID------------MLLSAMK--RLT 596
Query: 239 LRYPVFK 245
LRY + K
Sbjct: 597 LRYCLSK 603
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 159/390 (40%), Gaps = 60/390 (15%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ +++EM P++V ++ + + + D K++ G+ N YT ++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ R K A + K+ + G +PD N LI+ G+ ++++ M EN
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-- 187
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
P+ ++ N V + + L++D +
Sbjct: 188 -----------------------------GCQPDVVTYNSIVNGICRSGDTSLALD---L 215
Query: 298 LILLKKKNLVA--------IDSLL-SGIMDKSIQL-----DSAVISTIIEVN------CD 337
L ++++N+ A IDSL G +D +I L + S+++ N C
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 338 HRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ DGALL + V ++ + L+ + +K + E+ +EM G S +
Sbjct: 276 AGKWNDGALL-LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKT 453
L+ R A + L+ + KC+ T+T+LI Y D +K+++
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ ++G+ + T+++L+ G + G++ AE
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
TY+ +I G D A+ ++K M KGI S+ T+N L+ GL K G+ +D + K
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK-- 287
Query: 490 KSIQADALSKDAVP 503
D +S++ VP
Sbjct: 288 -----DMVSREIVP 296
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 100/180 (55%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
GF+ D +Y+ + + E K +++ VF+ MQEKG + +TYT+VMH L A ++
Sbjct: 255 HGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNE 314
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++E+MK C P Y++ + +L + R+K+A DV+++M ++G+ N + Y ++
Sbjct: 315 ALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMIS 374
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ AL++ +M+ +PD L++ CC+ + + +L +M +N +++
Sbjct: 375 SACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSV 434
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 86/169 (50%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++ ++ + +A+ + + E M++ G + D V+Y+ + D ++
Sbjct: 225 DSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVF 284
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM+ K C P +++YT M L ++ EA +VY++M + G P+ Y+ L+ L ++
Sbjct: 285 DEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQS 344
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
G+ ++A ++F M++ GV + N +I C + + + +L M+
Sbjct: 345 GRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERME 393
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 134/326 (41%), Gaps = 30/326 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + DR ++D + + F L + I +D+ ++ ++H A A
Sbjct: 187 GASKDREALNVLMDALVKEGDVEDAHSAF-LEFKDCITLDSSSFNILIHGYCKARMFVVA 245
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
I EEM+ +P +VSY+ ++ + V+ EM ++G PN TYT +M
Sbjct: 246 RKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHA 305
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +A + EALE++ KM+ G PD + LI ++G + + M++ +
Sbjct: 306 LGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRN 365
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-LSIDQGLVLI 299
V+ + + + S L +E + D P + L+ +
Sbjct: 366 LWVYNTMISSACAHSQGGSAL---------------KLLERMEGDSCKPDVKTYAPLLKM 410
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
++K++ + LLS + ++ +D + ++ C + + + A F+ +V
Sbjct: 411 CCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAV------- 463
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEE 385
L G++ + TF + E +E+
Sbjct: 464 ------LKGMVPMVKTFKALVEELEQ 483
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 98/502 (19%), Positives = 187/502 (37%), Gaps = 111/502 (22%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRF 67
V K L S D+ +L+ + +++DS+ V A+ F W + H
Sbjct: 75 VVKALNESGIDATNELVSQILMRFDSHCV-----------VAFGVFIWAKNQTSYVHTPE 123
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGIN--IDAVTYTSVMHWLSNAGDVDGAVNIWE 125
Y M+DI G+ K+ S M + E M KG+N + T + VM L+ A
Sbjct: 124 LYDYMIDILGKFKKFSLMWSLVEQM--KGLNGYVSLATASKVMRRLAKA----------- 170
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+ K+A DV++ + + G + VLM+ LV+ G
Sbjct: 171 ------------------------RKYKDAIDVFRGIEKYGASKDREALNVLMDALVKEG 206
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
E+A F + ++ + D ++ NILI CKA R ++ + M+E
Sbjct: 207 DVEDAHSAFLEFKDC-ITLDSSSFNILIHGYCKA---RMFVVARKIMEE----------- 251
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+ H F P+ +S + + ++K+
Sbjct: 252 ----------------MEKH-GFHPDVVSYS------------------CFIAAYCEQKD 276
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
++++ + +K + + +T++ R+ + AL +E + + Y +
Sbjct: 277 FRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSS 336
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
LI +L + ++ E+M K G +++ +I + + A K+ + E
Sbjct: 337 LIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERM-EGD 395
Query: 426 KC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
C TY L+ + S + M + + LGT+ +L+ + G++ A
Sbjct: 396 SCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHA 455
Query: 483 EIYRKEKKSIQADALSKDAVPM 504
Y +E A+ K VPM
Sbjct: 456 CFYFQE-------AVLKGMVPM 470
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 200/449 (44%), Gaps = 42/449 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA N + S G + T+ ++D F +A ++ + + M+ KG+ D + YT
Sbjct: 193 LEKALQLANEMQGS-GCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYT 251
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ + G++D +++E+ + P ++Y ++ R+KEA+++++ M++R
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER 311
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN YTYT L++ L GK +EAL++ + M + +P+ NI+I K CK
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADA 371
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFS---PEFISDNDAV 279
+ I+ MK+ R + Y L DE LL+ + S P+ IS N +
Sbjct: 372 LEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALI 431
Query: 280 EFVT--TDIEGPLSIDQGLVLIL----LKKKNLVAIDSLLSGIMDKSIQL---------- 323
+ + L I LV L + N++ +L SG ++K+++L
Sbjct: 432 HGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIV 491
Query: 324 -DSAVISTIIEVNCDHRRRDGAL-LAFEYSVKMDLNLERTA---YLALIGILIKLNTFPK 378
+S +T+I+ C + G L +A KM L+ + Y L+ L K T +
Sbjct: 492 PNSDTYTTMIDGFC----KTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQ 547
Query: 379 VAEIVEEMTKAGH-----SLGVYL-GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT 432
+ EEM + S + + G+L + SA + L P+ TY+
Sbjct: 548 AWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPD----LFTYS 603
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHP 461
LI + G D+A+ + M G P
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMIDSGFEP 632
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGF-NHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
+N LK+ + KA + +S S+ N D TYTTM+D F + ++ K + M+
Sbjct: 466 LNSTLKS-GDVNKAMELWKQISNSKIVPNSD--TYTTMIDGFCKTGMLNVAKGLLCKMRL 522
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+ Y ++ L G +D A ++EEM+ + +P ++S+ + +K
Sbjct: 523 SELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKS 582
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A + M GL P+ +TY+ L+ ++ G +EA+ F KM ++G +PD C+ +++
Sbjct: 583 AESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLK 642
Query: 215 KCCKAGET 222
C GET
Sbjct: 643 YCISQGET 650
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 182/473 (38%), Gaps = 73/473 (15%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF + + Y +L + M++ + D V+Y +V+ +++
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + EM+ C ++V++ + ++ EA + KEM +GL + YT L+
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
G+ + +F ++ E G P N LI CK G + I +M E +
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER--GV 313
Query: 240 RYPVF---------------KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
R V+ KEALQ + + D P ++ N + +
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE---------EPNVVTYNIIINKLCK 364
Query: 285 DIEGPLSIDQGLVLILLKKKNL----VAIDSLLSGI-----MDKSIQL-----------D 324
D L D ++ L+KK+ + +SLL G+ +D++ +L D
Sbjct: 365 D---SLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 325 SAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
VIS +I C R AL + DL +E+ ++ I LN+ K ++
Sbjct: 422 PDVISFNALIHGLCKGNRLHQALDIY------DLLVEKLGAGDIVTTNILLNSTLKSGDV 475
Query: 383 VEEM--------TKAGHSLGVYL----GALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
+ M +K + Y G L A+ + ++ L P
Sbjct: 476 NKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPS----VFD 531
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y L+ G+ D+A ++++ M R P + +FN+++ G K G + AE
Sbjct: 532 YNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAE 584
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 171/440 (38%), Gaps = 37/440 (8%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
F N+VS S +L+ F + ++ V LM ++G + Y ++ L
Sbjct: 104 FINFVSLS-----------GLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGL 152
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+ AV++ EM+ P +VSY ++ +++A + EM G +
Sbjct: 153 CRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSL 212
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILR 230
T+ +L++ +AGK +EA+ + +M+ G++ D LI C GE R L
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDE 272
Query: 231 YMK--ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
++ ++ A+ Y E + EF+ + V ++
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGRLKEASEIF---------EFMMERG----VRPNVYT 319
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+ GL + K+ L LL+ ++ K + + + II C AL
Sbjct: 320 YTGLIDGLCGVGKTKEAL----QLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV 375
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG---VYLGALLIHRL 405
E K + Y +L+G L + ++++ M K + AL IH L
Sbjct: 376 ELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNAL-IHGL 434
Query: 406 GSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
R A I+ LL E T L+ +G +KA++++K + I P+
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494
Query: 464 GTFNVLLAGLEKLGRVSDAE 483
T+ ++ G K G ++ A+
Sbjct: 495 DTYTTMIDGFCKTGMLNVAK 514
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/386 (18%), Positives = 155/386 (40%), Gaps = 19/386 (4%)
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++M L + + + A + + +M + + VS + ++ + A V M++
Sbjct: 76 NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
RG N Y Y +L++ L R ++ +A+ + +M++ + PD + N +I C+ E
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
+ + M+ + + + + F A + D + + E
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLK--------------EMKHK 241
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+E L + L+ L +L ++++ + +T+I C R A
Sbjct: 242 GLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEA 301
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
FE+ ++ + Y LI L + + +++ M + V ++I++
Sbjct: 302 SEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINK 361
Query: 405 LGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIH-- 460
L A +I L+ + + TY +L+G + G D+A K+ M + +
Sbjct: 362 LCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 461 PSLGTFNVLLAGLEKLGRVSDA-EIY 485
P + +FN L+ GL K R+ A +IY
Sbjct: 422 PDVISFNALIHGLCKGNRLHQALDIY 447
>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14770, mitochondrial-like, partial [Cucumis
sativus]
Length = 697
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 204/511 (39%), Gaps = 103/511 (20%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG N D T ++D ++ +I +Y+F + + + + +TY++++ GD++G
Sbjct: 88 RGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDING 147
Query: 120 AVNIWEEMKLKECYPTIVSYTA----YMKILFLNDRVKE--------------------- 154
A + EM+ K+C P +++Y++ Y+K L+D K
Sbjct: 148 AESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLD 207
Query: 155 ----------ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
A D+Y +M Q GL N + + + R+G+ EEA E+ +KM G++P
Sbjct: 208 GSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKP 267
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT-FKVADENDSLLWQ 263
D L++ K+G+ + + + + M + F + FK+ + ++
Sbjct: 268 DLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYS 327
Query: 264 VHPQ--FSPEFISDNDAVE--FVTTDIEGPLSI-----DQGLVLILLKKKNLVAIDSLLS 314
+ SP+ + N + F + L + + L+ N + + +++
Sbjct: 328 AMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLI------PNAITCNIMIN 381
Query: 315 GI-----MDKSIQL-----------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
G+ M+ +I + S ++ ++ RR D L E V M L +
Sbjct: 382 GLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKV 441
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
++ Y LI L KL K ++++M + G
Sbjct: 442 DKDVYNILISNLCKLGMTRKATAVLKDMEERG---------------------------- 473
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ D T TY ALI Y + +A Y TM + + P + T+N+LL GL K G
Sbjct: 474 --IIAD---TTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGL 528
Query: 479 VSDAEIYRKEKKSIQADALSKDAVPMEEKIC 509
+ +A+ E I+ L +A E +C
Sbjct: 529 IHEADDLLSE---IKKRGLVPNACTYETLMC 556
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 182/449 (40%), Gaps = 34/449 (7%)
Query: 72 MLDIF-GEAKRISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+LD F KR M+ EL M G+ D V YT++M +G V A+N+ +EM
Sbjct: 236 ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM 295
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K IV++ + LF + + +Y M + GL P+ TY ++ + G +
Sbjct: 296 TSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNW 354
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
ALE++++M+ + P+ CNI+I C+AG I IL+ M L ++
Sbjct: 355 TSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRIL 414
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
L + D++L + + D D + +++ L + +K V
Sbjct: 415 LNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNL---------CKLGMTRKATAV 465
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
D + ++ I D+ + +I C A + + + ++ + Y L+
Sbjct: 466 LKD-----MEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLL 520
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLL 421
G L K + +++ E+ K G L+ R +I+ +
Sbjct: 521 GGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFI 580
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
P+ + Y LIG + G +A ++ M KG+ P+ T+++L+ G L ++ D
Sbjct: 581 PKPR----AYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPD 636
Query: 482 AE-----IYRKEKKSIQADALSKDAVPME 505
YR E K + + + VP E
Sbjct: 637 LGSTLKISYRAEAKRLFIEMNDRGFVPCE 665
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 141/335 (42%), Gaps = 17/335 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+ D T+ +++ + + S + ++ M+E G++ D TY ++++ G+
Sbjct: 297 SKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWT 355
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ +W EMK ++ P ++ + L R++ A D+ KEM+ GL P TY +L+
Sbjct: 356 SALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILL 415
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
++ + + L+ + ++ DK NILI CK G TR +L+ M+E +
Sbjct: 416 NISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGII 475
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ + + ++ S E V+ DIE L+L
Sbjct: 476 ADTTTYNALIHGYCISSHLKRAFMTYSTMLS----------ERVSPDIE-----TYNLLL 520
Query: 299 ILLKKKNLV-AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L K L+ D LLS I + + ++ T++ +C R L + V
Sbjct: 521 GGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFI 580
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ AY LIG K+ + E++ EM G S
Sbjct: 581 PKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVS 615
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY ++ + + + + M + ++ D TY ++ LS AG +
Sbjct: 472 RGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHE 531
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ E+K + P +Y M KE +Y EM+ +G P Y +L+
Sbjct: 532 ADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIG 591
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
Y + GK ++A E+ ++MQ GV P +ILI C
Sbjct: 592 YFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWC 629
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 158/386 (40%), Gaps = 41/386 (10%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++EEM +P +V++ + + L + ++ E + +EM + G+ N +YT+L++
Sbjct: 8 ALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLD 67
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +AGK EAL + M G D AC +LI+ K+G+ + + + + L
Sbjct: 68 ALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVP 127
Query: 240 RYPVFKEALQ-TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD---IEGPLSIDQG 295
Y + + K+ D N + + + + + D V V T I G + QG
Sbjct: 128 NYITYSALIDGRCKLGDINGA-------ESALHEMEEKDCVPNVITYSSLING--YVKQG 178
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ K + + + I +I LD + + ++ D YS
Sbjct: 179 LLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDL-----------YSKMKQ 227
Query: 356 LNLERTAYL--ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
L+ ++ A + + + + E+V +M G L L++ +
Sbjct: 228 GGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGG------LKPDLVNYTNLMDGFLK 281
Query: 414 AAKIFSLLPEDQKCTA--------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+ K+ S L Q+ T+ T+ LI F G +D IY M G+ P L T
Sbjct: 282 SGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLAT 340
Query: 466 FNVLLAGLEKLGRVSDAEIYRKEKKS 491
+N +L G K G + A E KS
Sbjct: 341 YNTMLNGNFKKGNWTSALELWNEMKS 366
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 160/409 (39%), Gaps = 41/409 (10%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
++E M GI D VT+ S+++ L G + + EM VSYT + LF
Sbjct: 11 LYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALF 70
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+V EA MI RG + TVL++ L ++G+ +EA +F + + + P+
Sbjct: 71 KAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYI 130
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK----VADENDSLLWQ 263
+ LI+ CK G+ L M+E + + + + D L
Sbjct: 131 TYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKM 190
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSID-QGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
VH P + ++G Q + L L K G+ D
Sbjct: 191 VHKNAMPNICT-------YAILLDGSFKAGWQDIALDLYSKMK-------QGGLKDNVFI 236
Query: 323 LDSAVISTIIEVNCDHRRRDGAL-LAFEYSVKM---DLNLERTAYLALIGILIKLNTFPK 378
LD+ V ++ +R G + A E KM L + Y L+ +K
Sbjct: 237 LDAFV---------NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSS 287
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIH---RLGSA--RRPVPAAKIFSLLPEDQKCTATYTA 433
+ +EMT + +LI+ +LG + A + L P+ ATY
Sbjct: 288 ALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYSAMREMGLSPD----LATYNT 343
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ F G+ AL+++ M + + P+ T N+++ GL + GR+ +A
Sbjct: 344 MLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENA 392
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 96/470 (20%), Positives = 189/470 (40%), Gaps = 32/470 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ ++L + ++S K + M + G+N++ V+YT ++ L AG V A
Sbjct: 19 GIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEA 78
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ M ++ +++ T + LF + ++KEA ++ + Q L PN TY+ L++
Sbjct: 79 LMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDG 138
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G A +M+E P+ + LI K G +LR M
Sbjct: 139 RCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPN 198
Query: 241 YPVFKEALQ-TFKVADENDSLLWQVHPQFSPEFISDN------------------DAVEF 281
+ L +FK ++ +L ++ + + DN +A E
Sbjct: 199 ICTYAILLDGSFKAGWQDIAL--DLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEEL 256
Query: 282 VTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
V G L D L+ LK + + +L + K++ D +++ + +NC
Sbjct: 257 VAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFD--IVTFNVLINCL 314
Query: 338 HRRRDGALLAFEYSVK-MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ + +++ M L+ + Y ++ K + E+ EM
Sbjct: 315 FKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAI 374
Query: 397 LGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
++I+ L A R A I +L + TY L+ + + AD L+ ++ +
Sbjct: 375 TCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELL 434
Query: 455 CRKGIHPSLGTFNVLLAGLEKLG--RVSDAEIYRKEKKSIQADALSKDAV 502
+ +N+L++ L KLG R + A + E++ I AD + +A+
Sbjct: 435 VNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNAL 484
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 195/469 (41%), Gaps = 43/469 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +TY ++ R+ V M+ G +AVTY +++ AG++DGA
Sbjct: 147 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 206
Query: 121 VNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ M+ + P +V++ + + L R++ A V+ EM++ GL P+ +Y L+
Sbjct: 207 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 266
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G E+L +FS+M + G+ PD LI CKAG + ++ M+E L +
Sbjct: 267 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 326
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQ----FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
F + F D L V P + N + G + + +
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK--LGRMDLARE 384
Query: 296 LVLILLKKK---NLVAIDSLLSGI-----MDKSIQL-----------DSAVISTIIEVNC 336
L+ + K+ ++V +++SG +D + QL D+ S++I C
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ +R + A FE +++ + + Y LI K K + +EM + G V
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 504
Query: 397 LGALLIHRLGSARRPVPAAK-IFSLLPED-----------QKCTA-----TYTALIGVYF 439
++LI+ L + R A + +F L ED C + + AL+ +
Sbjct: 505 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFC 564
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G +A K+Y++M + +++L+ G + G V A + K+
Sbjct: 565 MKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQ 613
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 168/420 (40%), Gaps = 55/420 (13%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
Y +V+ LS+A + A M P + +Y ++ L R++EA V +M
Sbjct: 120 AYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM 178
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKAGE 221
G PN TY L+ RAG+ + A + S M+E G +P+ N ++ CKAG
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVE 280
+ M LA + L + KV ++SL V + + + D V
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESL--AVFSEMTQRGLVP-DVVT 295
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
F + L+ K NL +L++ + ++ ++++ + +I+ C
Sbjct: 296 FTS------------LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM-------------- 386
D ALLA E K + Y ALI KL E++ EM
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 387 -----TKAGH------------SLGVYLGAL----LIHRLGSARRPVPAAKIFSLLPE-- 423
K G+ GV A+ LI L +R A ++F + +
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Q TYT LI + G+ +KAL ++ M RKG+ P + T++VL+ GL K R +A
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 15/287 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG + T+T ++D F + + E M++ GI V Y ++++ G +
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + EM+ K P +V+Y+ + + A + ++M+++G+ P+ TY+ L
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L + +A E+F M + GVQPD+ LI+ CK G + + M +
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499
Query: 238 ---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN---DAVEFVTTDIE--GP 289
+ Y V L E LL++++ + + + DN DA+ + E
Sbjct: 500 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHE---DPVPDNIKYDALMLCCSKAEFKSV 556
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+++ +G + L K+ D + ++D++ +LD +V S +I +C
Sbjct: 557 VALLKGFCMKGLMKE----ADKVYQSMLDRNWKLDGSVYSILIHGHC 599
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A F+ + R G D +Y T+L + + + VF M ++G+ D VT+T
Sbjct: 239 MEGARKVFDEMVR-EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 297
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA----YMKILFLNDRVKEATDVYKE 161
S++H AG+++ AV + +M+ + V++TA + K FL+D A +E
Sbjct: 298 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD----ALLAVEE 353
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
M + G+ P+ Y L+ + G+ + A E+ +M+ V+PD + +I CK G
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 79/159 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D T+T+++ +A + + M+E+G+ ++ VT+T+++ G +D
Sbjct: 287 RGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDD 346
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ EEM+ P++V Y A + R+ A ++ +EM + + P+ TY+ ++
Sbjct: 347 ALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ G + A ++ KM + GV PD + LI C+
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 445
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FTYTT++D + + + + M KG+ D VTY+ +++ LS + A
Sbjct: 463 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 522
Query: 121 VNIWEEMKLKECYPTIVSYTAYM---------------KILFLNDRVKEATDVYKEMIQR 165
+ ++ ++ P + Y A M K + +KEA VY+ M+ R
Sbjct: 523 HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDR 582
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ Y++L+ R G +AL +M +G P+ +
Sbjct: 583 NWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTS 625
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 127/337 (37%), Gaps = 53/337 (15%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ Y ++ L A A S M GV P+ NIL+ C G
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ ++ M+ A + + F A E D E V +
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD-------------------GAERVVS- 211
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
L ++G K NLV +S+++G+ C R +GA
Sbjct: 212 ----LMREEGNA-----KPNLVTFNSMVNGL-------------------CKAGRMEGAR 243
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ V+ L + +Y L+ K+ + + EMT+ G V LIH
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303
Query: 406 GSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A A + + + E + T+TALI + G D AL + M + GI PS+
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363
Query: 464 GTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQADALS 498
+N L+ G KLGR+ A E+ R+ E K ++ D ++
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 206/465 (44%), Gaps = 43/465 (9%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D ++ N V++ +EKA N + S G + T+ ++D F +A ++
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGS-GCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+ M+ G+ D V YTS++ + G++D +++E+ + P ++Y ++
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
++KEA+++++ MI+RG+ PN YTYT L++ L GK +EAL+ + M E +P+
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVT 354
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVH 265
NI+I K CK G + I+ MK+ R + Y + L DE LL+ +
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 266 PQFS---PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK---------NLVAIDSLL 313
S P+ IS N + + + ++D + LL +K N++ +L
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALD---IYDLLVEKLGAGDRVTTNILLNSTLK 471
Query: 314 SGIMDKSIQL-----DSAVI--STIIEVNCDHRRRDGAL-LAFEYSVKM---DLNLERTA 362
+G ++K+++L DS ++ S D + G L +A KM +L
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGH-----SLGVYL-GALLIHRLGSARRPVPAAK 416
Y L+ L K + + + EEM + + S + + G+L + SA +
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L P+ TY+ LI + G D+A+ + M G P
Sbjct: 592 RAGLSPD----LFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT M+D F + ++ K + M+ + Y ++ L G +D A ++EEM
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ +P +VS+ + +K A + M + GL P+ +TY+ L+ ++ G
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYL 615
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+EA+ F KM ++G +PD C+ +++ C GET + +++ + + + L
Sbjct: 616 DEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVL 667
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 193/484 (39%), Gaps = 43/484 (8%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL- 91
+++ +L+ + M K F ++ RGF + + + +L G + + K V L
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK--GLCRNLECGKAVSLLR 166
Query: 92 -MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M+ + D +Y +V+ +++ A+ + EMK C ++V++ +
Sbjct: 167 EMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
++ EA KEM GL + YT L+ G+ + +F ++ E G P N
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVF---------------KEALQTFKVAD 255
LI CK G+ + I +M E +R V+ KEALQ +
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIER--GVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMI 344
Query: 256 END----SLLWQ--VHPQFSPEFISDN-DAVEFVTTDIEGPLSIDQGLVL-ILLKKKNLV 307
E D ++ + ++ ++D + VE + P +I ++L L K +L
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 308 AIDSLLSGIMDKSIQLDSAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
LL ++ S D VIS +I C R AL ++ V+ +R
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 366 LIGILIKLNTFPKVAEIVEEM--TKAGHSLGVYL----GALLIHRLGSARRPVPAAKIFS 419
L+ +K K E+ +++ +K + Y G L A+ + ++
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L P Y L+ GS D+A ++++ M R P + +FN+++ G K G +
Sbjct: 525 LQPS----VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 480 SDAE 483
AE
Sbjct: 581 KSAE 584
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 155/403 (38%), Gaps = 64/403 (15%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF+ + G ++ A +++M L + + + A + + +M + + VS + ++
Sbjct: 60 VFQQAVDSGSSL-AFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYV 118
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ A V M++RG N Y + +L++ L R + +A+ + +M+ + PD
Sbjct: 119 QMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVF 178
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+ N +I C+ E + + MK + + + + F A + D +
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMG----- 233
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
F+ + ++F+ GL + +LV SL+ G D
Sbjct: 234 ----FLKE---MKFM------------GL------EADLVVYTSLIRGFCD--------- 259
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER------TAYLALIGILIKLNTFPKVAE 381
C R AL D LER Y LI KL + +E
Sbjct: 260 --------CGELDRGKALF--------DEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYF 439
I E M + G VY LI L + A + +L+ E ++ TY +I
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G A++I + M ++ P T+N+LL GL G + +A
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 29 IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK D YT N ++ M++ F + + +G D TY +++D + K +++
Sbjct: 143 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK-QGIIPDVVTYNSLVDGYRLVKEVNTA 201
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
K +F M + G+N D +Y +++ VD A+N++ EM K P +V+Y + +
Sbjct: 202 KSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDG 261
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + R+ A + +M RG+PPN TY +++ L + + ++A+ + +K ++ G+QP
Sbjct: 262 LSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPS 321
Query: 206 KAACNILIEKCCKAGETR 223
ILI+ CK G +
Sbjct: 322 MYTYTILIDGLCKGGRLK 339
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 126/259 (48%), Gaps = 14/259 (5%)
Query: 32 DSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
++ T+N ++K + +A+LF + + + GF+ D+ +Y T+ I G K + +
Sbjct: 6 NTITLNTLIKGLCLKGQIHQAFLFHDKLV-ALGFHLDQVSYGTL--IHGLCK-VGETRAA 61
Query: 89 FELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+L+Q K + ++AV Y +V++ + V+ A +++ EM K P +V+Y+A +
Sbjct: 62 LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
F+ ++K+A D++ ++I + P+ YT+ +L++ + K +E +F+ M + G+ PD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKE---NRLALRYPVFKEALQTFKVADENDSLLW 262
N L++ E T I M + N Y + K D+ +L
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241
Query: 263 QVH-PQFSPEFISDNDAVE 280
++H P ++ N ++
Sbjct: 242 EMHCKNIIPNVVTYNSLID 260
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
FN +++ G N D +Y +++ F + K++ +F M K I + VTY S++ LS
Sbjct: 205 FNTMAQG-GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLS 263
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+G + A+ + ++M + P I++Y + + LF +V +A + + +G+ P+ Y
Sbjct: 264 KSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMY 323
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKM 197
TYT+L++ L + G+ ++A IF +
Sbjct: 324 TYTILIDGLCKGGRLKDARNIFEDL 348
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 133/341 (39%), Gaps = 23/341 (6%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN T L++ L G+ +A K+ G D+ + LI CK GETR
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 226 ILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVE- 280
+ +L+ + + L ++ + V D D V SP ++ + +
Sbjct: 62 LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121
Query: 281 -FVTTDIEGPLSIDQGLVL-----------ILL----KKKNLVAIDSLLSGIMDKSIQLD 324
FV ++ + + ++L IL+ K + + ++ + +M + I D
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+++++ + + A F + +N + +Y LI K+ K +
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAG 442
EM V LI L + R A ++ + + TY ++I F
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
DKA+ + +GI PS+ T+ +L+ GL K GR+ DA
Sbjct: 302 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDAR 342
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 180/440 (40%), Gaps = 54/440 (12%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
AW + V R G + +T M++ + ++ ++ + M+ KG+ D VTY +++
Sbjct: 241 AWEIYGEVVRG-GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI 299
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ G V+ A + + P +++Y A + L + A DV EM+Q GL
Sbjct: 300 NAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN TY L+ + R EA EIF +M GV PD + + LI + G ++
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 229 LRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVT--TD 285
R M+ + + ++ + F + +D+L + E ++ ++ VT T
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDAL------KMRDEMLARGCFMDVVTYNTF 473
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
+ G L KKK D L + ++++ + D +T+I C D AL
Sbjct: 474 LNG-----------LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
FE V+ +L ++ Y LI K + E+ ++M +
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK---------------- 566
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
++P+ +Y ++ + S+G +AL + M KGI P+L T
Sbjct: 567 -------------DIIPDH----ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 466 FNVLLAGLEKLGRVSDAEIY 485
N L+ G + G + A Y
Sbjct: 610 CNTLIKGYCRSGDMPKAYEY 629
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 8 VYKILKYSTWDSAQDLL---KNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRG 61
+Y + K +D A+D+L L + ++ T N +L + +A F+ +SR RG
Sbjct: 334 LYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR-RG 392
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D ++++++ + + F M+ GI D V YT ++ G + A+
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDAL 452
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ +EM + C+ +V+Y ++ L +A ++ EM++RG+ P+ YT+T L+
Sbjct: 453 KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ G ++AL +F M ++PDK N LI+ CKAGE
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 198/473 (41%), Gaps = 46/473 (9%)
Query: 29 IKWDSYTVNQVLKTHPPMEK--AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
I+ + YT+N ++ K +FF +G D TY T+++ + +
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ +G+ +TY ++++ L G D A ++ EM P +Y + +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
D + EA +++ EM +RG+ P+ +++ L+ L R G +AL F +M+ +G+ PD
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLA-------LRYPVFKEALQTFKVADENDS 259
ILI+ C+ G + M++ LA + Y F L K+ + D
Sbjct: 433 VIYTILIDGFCRNGALSDAL----KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488
Query: 260 LLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
L + V P+F + TT I G K N+ +L ++
Sbjct: 489 LFNEMVERGMVPDFYT-------FTTLIRG-----------YCKDGNMDKALNLFEAMVR 530
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+++ D +T+I+ C A ++ ++ D+ + +Y ++ P+
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARR-PVPAA-----KIFS--LLPEDQKCTAT 430
+ ++M + G + LI G R +P A K+ S ++P+ + +
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIK--GYCRSGDMPKAYEYLSKMISNGIIPD----SFS 644
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y LI Y + +KA + M ++G+ ++ T+N++L G G++ +AE
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAE 697
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D YT +++ + M+KA F + R+ D+ TY T++D F +A + K +
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN-LKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
++ M K I D ++Y +V++ ++G + A+N+ ++M K P +V+ +K
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ + +A + +MI G+ P+ ++Y L++ ++ E+A + ++M++ G+Q +
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Query: 209 CNILIEKCCKAGETRTIILILRYMKE 234
N+++ C G+ + +LR M E
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIE 705
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
I+ + T N ++K + M KA+ + + + S G D F+Y T++D + + +
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI-SNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ M+++G+ + +TY +++ G + A + +M P +Y++ +
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPN 170
D +KEA + EM+QRGL P+
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M GI D+ +Y +++ +++ A + EM+ + I++Y + +
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGK 692
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
++EA V ++MI+ G+ P+ TY+ L+ V +EA +M + G+ PD
Sbjct: 693 MQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
AF+ + +++ A L+G L++ EI E+ + G L VY ++++ L
Sbjct: 209 AFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALC 268
Query: 407 SARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
R+ S + E + A TY LI Y G ++A ++ + +G+ P L
Sbjct: 269 KDRKFENVMFFLSDM-EGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGL 327
Query: 464 GTFNVLLAGLEKLGRVSDAE 483
T+N +L GL K+G+ A+
Sbjct: 328 LTYNAILYGLCKIGKYDRAK 347
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 130/375 (34%), Gaps = 76/375 (20%)
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRG----------LPPNCY-------TYTVLME 179
+S +A + L R+ EA M+++ L C+ Y +L+
Sbjct: 136 LSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVR 195
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
V+A K E E F ++ GV ACN L+ + G
Sbjct: 196 TYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWV----------------- 238
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
L W+++ E V IE + +V
Sbjct: 239 -------------------DLAWEIYG-------------EVVRGGIELNVYTLNIMVNA 266
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K + + LS + K + D +T+I C + A +
Sbjct: 267 LCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPG 326
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y A++ L K+ + + +++ EM + G + L+ + + A +IF
Sbjct: 327 LLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFD 386
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+LP+ ++++LIGV G +AL ++ M R GI P + +L+ G
Sbjct: 387 EMSRRGVLPD----LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442
Query: 474 EKLGRVSDAEIYRKE 488
+ G +SDA R E
Sbjct: 443 CRNGALSDALKMRDE 457
>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Cucumis sativus]
Length = 683
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 204/511 (39%), Gaps = 103/511 (20%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG N D T ++D ++ +I +Y+F + + + + +TY++++ GD++G
Sbjct: 74 RGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDING 133
Query: 120 AVNIWEEMKLKECYPTIVSYTA----YMKILFLNDRVKE--------------------- 154
A + EM+ K+C P +++Y++ Y+K L+D K
Sbjct: 134 AESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLD 193
Query: 155 ----------ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
A D+Y +M Q GL N + + + R+G+ EEA E+ +KM G++P
Sbjct: 194 GSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKP 253
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT-FKVADENDSLLWQ 263
D L++ K+G+ + + + + M + F + FK+ + ++
Sbjct: 254 DLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTESIYS 313
Query: 264 VHPQ--FSPEFISDNDAVE--FVTTDIEGPLSI-----DQGLVLILLKKKNLVAIDSLLS 314
+ SP+ + N + F + L + + L+ N + + +++
Sbjct: 314 AMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLI------PNAITCNIMIN 367
Query: 315 GI-----MDKSIQL-----------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
G+ M+ +I + S ++ ++ RR D L E V M L +
Sbjct: 368 GLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKV 427
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
++ Y LI L KL K ++++M + G
Sbjct: 428 DKDVYNILISNLCKLGMTRKATAVLKDMEERG---------------------------- 459
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ D T TY ALI Y + +A Y TM + + P + T+N+LL GL K G
Sbjct: 460 --IIAD---TTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGL 514
Query: 479 VSDAEIYRKEKKSIQADALSKDAVPMEEKIC 509
+ +A+ E I+ L +A E +C
Sbjct: 515 IHEADDLLSE---IKKRGLVPNACTYETLMC 542
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 182/449 (40%), Gaps = 34/449 (7%)
Query: 72 MLDIF-GEAKRISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+LD F KR M+ EL M G+ D V YT++M +G V A+N+ +EM
Sbjct: 222 ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM 281
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K IV++ + LF + + +Y M + GL P+ TY ++ + G +
Sbjct: 282 TSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNW 340
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
ALE++++M+ + P+ CNI+I C+AG I IL+ M L ++
Sbjct: 341 TSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRIL 400
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
L + D++L + + D D + +++ L + +K V
Sbjct: 401 LNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNL---------CKLGMTRKATAV 451
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
D + ++ I D+ + +I C A + + + ++ + Y L+
Sbjct: 452 LKD-----MEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLL 506
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLL 421
G L K + +++ E+ K G L+ R +I+ +
Sbjct: 507 GGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFI 566
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
P+ + Y LIG + G +A ++ M KG+ P+ T+++L+ G L ++ D
Sbjct: 567 PKPR----AYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPD 622
Query: 482 AE-----IYRKEKKSIQADALSKDAVPME 505
YR E K + + + VP E
Sbjct: 623 LGSTLKISYRAEAKRLFIEMNDRGFVPCE 651
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 141/335 (42%), Gaps = 17/335 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+ D T+ +++ + + S + ++ M+E G++ D TY ++++ G+
Sbjct: 283 SKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWT 341
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ +W EMK ++ P ++ + L R++ A D+ KEM+ GL P TY +L+
Sbjct: 342 SALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILL 401
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
++ + + L+ + ++ DK NILI CK G TR +L+ M+E +
Sbjct: 402 NISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGII 461
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ + + ++ S E V+ DIE L+L
Sbjct: 462 ADTTTYNALIHGYCISSHLKRAFMTYSTMLS----------ERVSPDIE-----TYNLLL 506
Query: 299 ILLKKKNLV-AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L K L+ D LLS I + + ++ T++ +C R L + V
Sbjct: 507 GGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFI 566
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ AY LIG K+ + E++ EM G S
Sbjct: 567 PKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVS 601
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY ++ + + + + M + ++ D TY ++ LS AG +
Sbjct: 458 RGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHE 517
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ E+K + P +Y M KE +Y EM+ +G P Y +L+
Sbjct: 518 ADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIG 577
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
Y + GK ++A E+ ++MQ GV P +ILI C
Sbjct: 578 YFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWC 615
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 96/470 (20%), Positives = 189/470 (40%), Gaps = 32/470 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ ++L + ++S K + M + G+N++ V+YT ++ L AG V A
Sbjct: 5 GIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEA 64
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ M ++ +++ T + LF + ++KEA ++ + Q L PN TY+ L++
Sbjct: 65 LMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDS 124
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G A +M+E P+ + LI K G +LR M
Sbjct: 125 RCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPN 184
Query: 241 YPVFKEALQ-TFKVADENDSLLWQVHPQFSPEFISDN------------------DAVEF 281
+ L +FK ++ +L ++ + + DN +A E
Sbjct: 185 ICTYAILLDGSFKAGWQDIAL--DLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEEL 242
Query: 282 VTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
V G L D L+ LK + + +L + K++ D +++ + +NC
Sbjct: 243 VAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFD--IVTFNVLINCL 300
Query: 338 HRRRDGALLAFEYSVK-MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ + +++ M L+ + Y ++ K + E+ EM
Sbjct: 301 FKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAI 360
Query: 397 LGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
++I+ L A R A I +L + TY L+ + + AD L+ ++ +
Sbjct: 361 TCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELL 420
Query: 455 CRKGIHPSLGTFNVLLAGLEKLG--RVSDAEIYRKEKKSIQADALSKDAV 502
+ +N+L++ L KLG R + A + E++ I AD + +A+
Sbjct: 421 VNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNAL 470
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 208/518 (40%), Gaps = 87/518 (16%)
Query: 8 VYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
+ +++ W + Q+ +++L ++D V VL + A FF WV R+ F HDR
Sbjct: 93 ICRMMANRAWTTRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDR 152
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+ +++I G A +++ + + M +KG+ D + ++ AG V +V ++++
Sbjct: 153 DTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQK 212
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK TI SY A K++ R A + M+ G+ P C+TY +++ + K
Sbjct: 213 MKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLK 272
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
E A F +M+E + PD N +I Y + ++ E
Sbjct: 273 VETANRFFEEMKERRISPDVVTYNTMING---------------YYRIKKM--------E 309
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQGLVLI---- 299
+ F V + ++ P IS TT I+G +S +D GL L
Sbjct: 310 EAEKFFVEMKGRNI--------EPTVIS-------YTTMIKGYVSVGRVDDGLRLFEEMK 354
Query: 300 -LLKKKNLVAIDSLLSGIMDKSIQL-----------------DSAVISTIIEVNCDHRRR 341
K N V +LL G+ D L D+++ +I C +
Sbjct: 355 SFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQL 414
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE---------------EM 386
D A + +++ + E Y LI K + + ++++ EM
Sbjct: 415 DAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEM 474
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTALIGVYFSAGSAD 445
+G++ L+I L ++ + A +F L+ + + + LI + G+ +
Sbjct: 475 ESSGYN-------LIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPE 527
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
A +I K M R+ + + +L+ K G +DA+
Sbjct: 528 SAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAK 565
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 3/167 (1%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ ++M + + +A Y ++ G+ A + M P + + M+ LF
Sbjct: 532 ILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLF 591
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ R++ A+ V M+++G+ N ++E L+ G EEAL + G +PD
Sbjct: 592 EDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD-- 649
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+ L+ C G+T + +L + E + + ++ L A
Sbjct: 650 -FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTA 695
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +++ + + S + +F + +KG+ D + + +++ S G + A I + M
Sbjct: 479 YNLIIEYLCNSGQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPESAFEILKIMG 537
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+E +Y ++ +A MI+ G P+ + +ME L G+ +
Sbjct: 538 RREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQ 597
Query: 189 EALEIFSKMQEAGVQPD 205
A + + M E GV+ +
Sbjct: 598 TASRVMNNMVEKGVKEN 614
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 7/211 (3%)
Query: 25 KNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI 82
+ +P + D+Y + LK P + + G D + ++++ E RI
Sbjct: 539 REVPREADAYRLLIESFLKKGEPADAKTALDGMIEN--GHIPDSSLFRSVMESLFEDGRI 596
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+ V M EKG+ + ++ L G V+ A+ + + C P +
Sbjct: 597 QTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEP---DFDGL 653
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ +L + A + ++R + +Y +++ L+ AGK A I K+ + G
Sbjct: 654 LSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIMQKGG 713
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMK 233
D ++C LI + G T+ ++ R +K
Sbjct: 714 ATDWSSCKDLIRSLNEEGNTKQADILSRMIK 744
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 208/518 (40%), Gaps = 87/518 (16%)
Query: 8 VYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
+ +++ W + Q+ +++L ++D V VL + A FF WV R+ F HDR
Sbjct: 93 ICRMMANRAWTTRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDR 152
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+ +++I G A +++ + + M +KG+ D + ++ AG V +V ++++
Sbjct: 153 DTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQK 212
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK TI SY A K++ R A + M+ G+ P C+TY +++ + K
Sbjct: 213 MKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLK 272
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
E A F +M+E + PD N +I Y + ++ E
Sbjct: 273 VETANRFFEEMKERRISPDVVTYNTMING---------------YYRIKKM--------E 309
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQGLVLI---- 299
+ F V + ++ P IS TT I+G +S +D GL L
Sbjct: 310 EAEKFFVEMKGRNI--------EPTVIS-------YTTMIKGYVSVGRVDDGLRLFEEMK 354
Query: 300 -LLKKKNLVAIDSLLSGIMDKSIQL-----------------DSAVISTIIEVNCDHRRR 341
K N V +LL G+ D L D+++ +I C +
Sbjct: 355 SFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQL 414
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE---------------EM 386
D A + +++ + E Y LI K + + ++++ EM
Sbjct: 415 DAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEM 474
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTALIGVYFSAGSAD 445
+G++ L+I L ++ + A +F L+ + + + LI + G+ +
Sbjct: 475 ESSGYN-------LIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPE 527
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
A +I K M R+ + + +L+ K G +DA+
Sbjct: 528 SAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAK 565
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 3/167 (1%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ ++M + + +A Y ++ G+ A + M P + + M+ LF
Sbjct: 532 ILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLF 591
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ R++ A+ V M+++G+ N ++E L+ G EEAL + G +PD
Sbjct: 592 EDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD-- 649
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+ L+ C G+T + +L + E + + ++ L A
Sbjct: 650 -FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTA 695
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +++ + + S + +F + +KG+ D + + +++ S G + A I + M
Sbjct: 479 YNLIIEYLCNSGQTSKAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEGAPESAFEILKIMG 537
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+E +Y ++ +A MI+ G P+ + +ME L G+ +
Sbjct: 538 RREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFEDGRIQ 597
Query: 189 EALEIFSKMQEAGVQPD 205
A + + M E GV+ +
Sbjct: 598 TASRVMNNMVEKGVKEN 614
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 7/211 (3%)
Query: 25 KNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI 82
+ +P + D+Y + LK P + + G D + ++++ E RI
Sbjct: 539 REVPREADAYRLLIESFLKKGEPADAKTALDGMIEN--GHIPDSSLFRSVMESLFEDGRI 596
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+ V M EKG+ + ++ L G V+ A+ + + C P +
Sbjct: 597 QTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEP---DFDGL 653
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ +L + A + ++R + +Y +++ L+ AGK A I K+ + G
Sbjct: 654 LSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIMQKGG 713
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMK 233
D ++C LI + G T+ ++ R +K
Sbjct: 714 ATDWSSCKDLIRSLNEEGNTKQADILSRMIK 744
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 203/488 (41%), Gaps = 47/488 (9%)
Query: 61 GFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + TY T++D + + +S++ + ++ + I + V Y++++ L G
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N++ EM+ K +P + +Y + + + R +A + +EM++R + P+ TY L+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
V+ GK+ EA E++ +M G+ P+ + +I+ CK + M +
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
F + + A D + +H ++D ++ G L+
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYN----------TLIHGFYLV 443
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+L A LL ++ + D T+++ CD+ + AL F+ K +L+
Sbjct: 444 ----GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 360 RT-----------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ Y LI LI F + E+ EEM G + +I L
Sbjct: 500 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 409 RRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
R A ++F + T+T LI Y AG D L+++ M R+GI + T+
Sbjct: 560 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 619
Query: 467 NVLLAGLEKLGRVSDA-EIYRKEKKS-IQADALS--------------KDAVPMEEKI-- 508
L+ G K+G ++ A +I+++ S + D ++ K AV M EK+
Sbjct: 620 ITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679
Query: 509 -CDLLYGG 515
DL +GG
Sbjct: 680 SMDLSFGG 687
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 190/475 (40%), Gaps = 60/475 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ + RSR + ++ + +R + +++ M+ K I D ++
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFN 118
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + + A++ + ++ +P +V++T + L + DRV EA D + +M +
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN T+T LM L R G+ EA+ + +M E G+QP + +++ CK G+T +
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 226 ILILRYMKE-----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN---- 276
+ +LR M+E + + + + + +D + P+ + N
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 277 ---------DAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
DA + + +E +S D L+ +K+ + L ++ + I
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
++ S++I+ C R D A F + + LI E++
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
EMT+ G L D T TY LI ++ G
Sbjct: 419 HEMTETG------------------------------LVAD---TTTYNTLIHGFYLVGD 445
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA----EIYRKEKKSIQA 494
+ AL + + M G+ P + T + LL GL G++ DA ++ +K KK + A
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 163/429 (37%), Gaps = 62/429 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D FTY +M+ F + R S + + + M E+ I+ D VTY ++++ G
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +++EM + P ++Y++ + +R+ A ++ M +G PN T+ L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ A + ++ +E+ +M E G+ D N LI G+ + +L+ M + L
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461
Query: 238 A-------------LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
K+AL+ FKV ++ L HP
Sbjct: 462 CPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP----------------FN 505
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+E + L+ L+ + + + L + + I D+ S++I+ C R D A
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F+ + + LI K E+ EM
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM------------------ 607
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
RR + A I TY LI + G+ + AL I++ M G++P
Sbjct: 608 ---GRRGIVANAI------------TYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652
Query: 465 TFNVLLAGL 473
T +L GL
Sbjct: 653 TIRNMLTGL 661
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ ++G + + T+ T++D + AKRI + M E G+ D TY +++H
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ---------- 164
GD++ A+++ +EM P IV+ + L N ++K+A +++K M +
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 165 -RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G+ P+ TY +L+ L+ GK+ EA E++ +M G+ PD + +I+ CK
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M+D + R+ +F+ M K + + VT+T++++ AG VD
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y + + A D+++EMI G+ P+ T ++
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + + A+ + K+Q
Sbjct: 660 GLWSKEELKRAVAMLEKLQ 678
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 153/396 (38%), Gaps = 61/396 (15%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E G +++ S H + D A++++ +M P++V + M ++ +R
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLED---AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD 96
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+Y++M ++ + + Y++ +L++ K AL F K+ + G+ PD L+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLL 156
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
C E+R++ EAL F H F E
Sbjct: 157 HGLC---------------VEDRVS-------EALDFF-------------HQMF--ETT 179
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ V F T L+ L ++ +V +LL +M+ +Q TI++
Sbjct: 180 CRPNVVTFTT------------LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
Query: 334 VNCDHRRRDGALLAFEYSVKMD----LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C ++ + A KM+ + Y A+I L K + EM +
Sbjct: 228 GMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKA 447
G ++ +I S+ R A ++ + E + TY ALI + G +A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++Y M +GI P+ T++ ++ G K R+ AE
Sbjct: 345 EELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 20 AQDLLKNLP---IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A++L + +P I D+ T + + L +++A F+ + S+ F+ + T+TT++
Sbjct: 530 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG-SKSFSPNVVTFTTLI 588
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ + +A R+ +F M +GI +A+TY +++ G+++GA++I++EM Y
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEM 162
P ++ + L+ + +K A + +++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 192/438 (43%), Gaps = 30/438 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY+T++ RIS +F M++ G DA+ Y ++M L G ++
Sbjct: 39 RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINI 98
Query: 120 AVNIWEEMKLK------ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
A+++ +EM +C PT+VSY+ + L + R EA +++KEM +G+ P+ +
Sbjct: 99 ALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVIS 158
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
YT L+ R+GK+E+A +F++M + G++ D ++LI+ CK G+ +L M
Sbjct: 159 YTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMI 218
Query: 234 ENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFV--TTDIE 287
+ L + ++ ++++ + P+ I+ ++ + T +I
Sbjct: 219 QRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNIN 278
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
L + Q ++ D+ GI K + ++ II+ C RR D A
Sbjct: 279 TALQLHQEML-----------NDTGRYGIKCKPTLISYSI---IIDGLCKDRREDEAREL 324
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F+ + + +Y LI + K + EM G V ++LI L
Sbjct: 325 FKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 384
Query: 408 ARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
+ + A K+ ++ + + C T T L+ KA +++ M + G P++
Sbjct: 385 KGKVIEANKLLEVVIQ-RGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 443
Query: 465 TFNVLLAGLEKLGRVSDA 482
T L+ GL + G + A
Sbjct: 444 TCATLMKGLCQSGNIKIA 461
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 184/454 (40%), Gaps = 43/454 (9%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y+ ++D + +R + +F+ M+ +G+ D ++YTS++H +G + A ++ EM
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ + + + IL +V EA ++ + MIQRG + TY+ L++ L +
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM---------KENRLA 238
EA +F MQ+ G +PD A L++ C+ G T + + + M K
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAV-----------------E 280
+ Y + + L + DE L ++ Q P+ IS + E
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+ I+ ++ L+ +L KK ++ + LL ++ + D +T+++ C R
Sbjct: 363 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHR 422
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL--- 397
A F K+ L+ L + E+ + M G+
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 482
Query: 398 ---------GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKAL 448
G R AR K ++P+ +YT+LI + +G A
Sbjct: 483 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPD----VISYTSLIHGFCRSGKWKDAK 538
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M G+ P + TF+VL+ L K G+V +A
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEA 572
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D +YT+++ F + + KY+F M + G+ D T++ ++ L G V
Sbjct: 510 KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKV 569
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + E M + C P V+YT +K L +NDR+ EAT ++ +M + G P+ TY L
Sbjct: 570 IEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTL 629
Query: 178 MEYLVRAGKYEEALEIFSKMQE------AGVQPDKAACNILIEKCCKAG 220
M+ L + G + ALE+ KM +PD + +I+I+ CK G
Sbjct: 630 MKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHG 678
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TYTT++ RIS +F MQ+ G D VTY ++M L G++
Sbjct: 582 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 641
Query: 120 AVNIWEEM---------KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
A+ + ++M K P ++SY+ + L + R EA +++KEM G+ PN
Sbjct: 642 ALELHKKMLSDTGQYGTNFK---PDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 698
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+YT L+ R+GK E+A +F++M + GVQ + +++I CK G+
Sbjct: 699 VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 749
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 190/449 (42%), Gaps = 36/449 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++G D +YTT++ F + + K +F M + GI D T + ++ L G V
Sbjct: 329 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKV 388
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + E + + C P +V+ T +K L + R+ +AT ++ +M + G PN T L
Sbjct: 389 IEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 448
Query: 178 MEYLVRAGKYEEALEIFSKMQE------AGVQPDKAACNILIEKCCKAGETRTIILILRY 231
M+ L ++G + ALE+ M +P+ + +I+I+ CK G + +
Sbjct: 449 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 508
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
MK + + + F + + W+ +++ + E V ++ ++
Sbjct: 509 MKALGVIPDVISYTSLIHGFCRSGK-----WK-----DAKYLFN----EMVDIGVQPDVT 554
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
L+ +L K+ ++ + LL ++ + ++ +T+++ C + R A F
Sbjct: 555 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 614
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM-TKAGH----------SLGVYLGAL 400
K+ + Y L+ L + E+ ++M + G S + + L
Sbjct: 615 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 674
Query: 401 LIH-RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
H R AR K ++P +YT+LI + +G + A ++ M +G+
Sbjct: 675 CKHGREDEARELFKEMKALGVIPN----VISYTSLIHGFCRSGKLEDAKHLFNEMVDQGV 730
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ T++V++ G K G++ A + E
Sbjct: 731 QLNAVTYSVMIHGFCKEGQIDKALFQKME 759
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 165/409 (40%), Gaps = 36/409 (8%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M GI D T ++ G V A + E M + C IV+Y+ +K L + R
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM----QEAGV--QPD 205
+ EAT ++ M + G P+ Y LM+ L + GK AL + +M + G+ +P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
+ +I+I+ CK + + MK + + + F + + W+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGK-----WEKA 175
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
E + I ++ L+ IL K+ ++ + LL ++ + LD
Sbjct: 176 KCLFNEMLD---------VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 226
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
ST+I+ C R A F K+ + AY L+ L + ++ +E
Sbjct: 227 VTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQE 286
Query: 386 MTKAGHSLGVYLG------ALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTA 433
M G+ +++I L RR A ++F ++P+ +YT
Sbjct: 287 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPD----VISYTT 342
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
LI + +G +KA ++ M GI P + T +VL+ L K G+V +A
Sbjct: 343 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 391
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 193/499 (38%), Gaps = 73/499 (14%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV----TY 104
A FN V GF H TY M++ G + +M+ V M++ N+D+ Y
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK---NVDSKMLEGVY 79
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+M G V AVN++E M +C P++ SY A M IL +A VY M
Sbjct: 80 IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139
Query: 165 RGLPPNCYTYTVLMEYLVRAGK------------------------------YE-----E 189
G+ P+ YT+T+ M+ G+ Y+ E
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR-TIILILRYMKENRLA--LRYPVFKE 246
A +F +M + G+ PD N LI CK G + + L + MK + +F +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 247 ALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAV-----------------EFVTTDIEG 288
L DE LL V +P+ IS N + + V + +E
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
++ K + D +L M K D S++I C+ + A+ F
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+++ Y L+ L K + +++++M + G S ++ L+++ L
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439
Query: 409 RRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
A I + +P+ T+ LI Y + DKA++I TM GI P
Sbjct: 440 GCLSDANGILNDAIAKGCIPD----IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495
Query: 463 LGTFNVLLAGLEKLGRVSD 481
+ T+N LL GL K ++ +
Sbjct: 496 VITYNTLLNGLCKARKLDN 514
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D FT+ T++D + + + + + + M GI D +TY ++++ L A +D
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
V+ ++ M K C P I++Y ++ + +V EA +++KEM RGL P+ T L+
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 179 EYLVRAGKYEEALEIFSKMQ-EAGVQPDKAACNILIEKCCK 218
L G+ ++A E+F ++ E A NI+I C+
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCE 614
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 175/444 (39%), Gaps = 55/444 (12%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H + +A + + + S G + FTY T+++ F +A + + + KG D
Sbjct: 299 HSKLVEAECYLHKMVNS-GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY+S+++ L N GD++ A+ ++ E K +I+ Y +K L V +A + K+M
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++ G P+ +TY +++ L + G +A I + G PD N LI+ CK
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477
Query: 223 RTIILILRYMKENRLA---LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDA 278
I IL M + + + Y L + K+ + D+ + +P I+ N
Sbjct: 478 DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNIL 537
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+E D + + L + + + D + T+I C +
Sbjct: 538 IESFCKD------------------RKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSN 579
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
D A+E V ++ + + A+ I+I N F + L V +
Sbjct: 580 GELDK---AYELFVTIEKEYKFSYSTAIFNIMI--NAFCE-------------KLNVSMA 621
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
L H++G + P++ TY +I Y G+ D A KG
Sbjct: 622 EKLFHKMGGS----------DCAPDNY----TYRVMIDSYCKTGNIDLAHTFLLENISKG 667
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
+ PS T +L L R+S+A
Sbjct: 668 LVPSFTTCGKVLNCLCVTHRLSEA 691
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+Y A++ IL++ F + ++ M G VY + + RP A ++ + +
Sbjct: 113 SYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM 172
Query: 422 PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P Q C +Y A+I ++ +A ++ M ++GI P + TFN L+ L K G
Sbjct: 173 P-GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGN 231
Query: 479 VSDAE 483
V ++E
Sbjct: 232 VQESE 236
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+Y A+I K N + + +EM K G + LIH L + K+FS +
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 422 PEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ C T+ I G+ D+A ++ +++ +G+ P + ++N L+ G K ++
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 480 SDAEIY 485
+AE Y
Sbjct: 303 VEAECY 308
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 187/454 (41%), Gaps = 39/454 (8%)
Query: 52 FFNWVSRSRGFN---------------HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG 96
FF+ ++R++ FN H+ +T M++ F + V + + G
Sbjct: 84 FFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 143
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
D T+ +++ L G V AV + + M C P +V+Y + + + + A
Sbjct: 144 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 203
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
D+ ++M +R + + +TY+ +++ L R G + A+ +F +M+ G++ N L+
Sbjct: 204 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 263
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEF 272
CKAG+ L+L+ M + F L F K+ + N+ + SP
Sbjct: 264 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 323
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
I+ N ++ G + + L +++L ++ D +++I
Sbjct: 324 ITYNTLMD--------------GYCM----QNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C +R D + F K L Y L+ + E+ +EM G
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAGSADKALKI 450
V +L+ L + A +IF L + + YT +I G + A +
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ ++ KG+ P++ T+ V+++GL K G +S+A I
Sbjct: 486 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 519
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 189/446 (42%), Gaps = 61/446 (13%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++++ + S + M+E+ + D TY++++ L G +D A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++++EM+ K ++V+Y + ++ L + + + K+M+ R + PN T+ VL++
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
V+ GK +EA E++ +M G+ P+ N L++ Y +NRL
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDG---------------YCMQNRL--- 339
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL---SIDQGL- 296
++ N+ L V + SP+ ++ T+ I+G +D G+
Sbjct: 340 -------------SEANNMLDLMVRNKCSPDIVT-------FTSLIKGYCMVKRVDDGMK 379
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
V + K+ LVA ++ S +++ C + A F+ V +
Sbjct: 380 VFRNISKRGLVA---------------NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 424
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y L+ L K EI E++ K+ LG+ + +I + + A
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+F LP + TYT +I GS +A + + M G P+ T+N L+
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544
Query: 475 KLGRVSDAEIYRKEKKS--IQADALS 498
+ G ++ + +E KS ADA S
Sbjct: 545 RDGDLTASAKLIEEMKSCGFSADASS 570
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F +S+ RG + TY+ ++ F ++ +I + +F+ M G+ D +TY ++ L
Sbjct: 381 FRNISK-RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 439
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ G ++ A+ I+E+++ + IV YT ++ + +V++A +++ + +G+ PN
Sbjct: 440 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 499
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TYTV++ L + G EA + KM+E G P+ N LI + G+ ++ M
Sbjct: 500 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 559
Query: 233 K 233
K
Sbjct: 560 K 560
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TY +LD + ++ +FE +Q+ +++ V YT+++ + G V+
Sbjct: 421 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 480
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A N++ + K P +++YT + L + EA + ++M + G PN TY L+
Sbjct: 481 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+R G + ++ +M+ G D ++ ++I+ ++L MK RL
Sbjct: 541 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID------------MLLSAMK--RLT 586
Query: 239 LRYPVFK 245
LRY + K
Sbjct: 587 LRYCLSK 593
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 159/390 (40%), Gaps = 60/390 (15%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ +++EM P++V ++ + + + D K++ G+ N YT ++
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ R K A + K+ + G +PD N LI+ G+ ++++ M EN
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-- 177
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
P+ ++ N V + + L++D +
Sbjct: 178 -----------------------------GCQPDVVTYNSIVNGICRSGDTSLALD---L 205
Query: 298 LILLKKKNLVA--------IDSLL-SGIMDKSIQL-----DSAVISTIIEVN------CD 337
L ++++N+ A IDSL G +D +I L + S+++ N C
Sbjct: 206 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 265
Query: 338 HRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ DGALL + V ++ + L+ + +K + E+ +EM G S +
Sbjct: 266 AGKWNDGALL-LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 324
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKT 453
L+ R A + L+ + KC+ T+T+LI Y D +K+++
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 383
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ ++G+ + T+++L+ G + G++ AE
Sbjct: 384 ISKRGLVANAVTYSILVQGFCQSGKIKLAE 413
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
TY+ +I G D A+ ++K M KGI S+ T+N L+ GL K G+ +D + K
Sbjct: 220 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK-- 277
Query: 490 KSIQADALSKDAVP 503
D +S++ VP
Sbjct: 278 -----DMVSREIVP 286
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
V A +++KEMIQRG+ PN TY+ L++ + + +EA ++ M G
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/500 (20%), Positives = 205/500 (41%), Gaps = 37/500 (7%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRS 59
+T+ N Y + + A+ L+ +P D++T N +++ + A F+ +
Sbjct: 134 NTMVNGY--CRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLH- 190
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY+ +LD +A + + M+ KG D VTY +++ + N GDVD
Sbjct: 191 RGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 250
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+NI ++ C P V+YT +K L ++R KE +++ EM P+ T+ ++
Sbjct: 251 ALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVT 310
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + G + A+++ M E G PD + +++ C G + +L +K
Sbjct: 311 SLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 370
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L+ ++ W+ + E + + + VT + +GLV
Sbjct: 371 DTIAYTTVLKGLCSIEQ-----WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDR 425
Query: 300 LLK----------KKNLVAIDSLLSGI-----MDKSIQL-----------DSAVISTIIE 333
+K ++V +S++ G+ +D +++L D +T+++
Sbjct: 426 AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLK 485
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C R + A + D + T + +I L + + E ++ M + G
Sbjct: 486 GLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIP 545
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
+++ L A + A K+ S + TY +I AG ++AL + +
Sbjct: 546 NQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRV 605
Query: 454 MCRKGIHPSLGTFNVLLAGL 473
M G+ P T+ L G+
Sbjct: 606 MVSNGLSPDTITYRSLAYGI 625
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 166/406 (40%), Gaps = 24/406 (5%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R++ + VF + G + VTY ++++ AG ++ A + M P ++
Sbjct: 113 RVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMPFP---PDTFTFN 166
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
++ L + RV +A V+ +M+ RG P+ TY++L++ +A Y +A+ + +M+
Sbjct: 167 PLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAK 226
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
G +PD N+LI C G+ + IL + + + L++ ++
Sbjct: 227 GCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER---- 282
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
W+ + E S+ A + VT + QGLV +K ++ + +
Sbjct: 283 -WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIK---------VVDHMSEHG 332
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D S+I++ CD R D A+ + AY ++ L + +
Sbjct: 333 CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAE 392
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGV 437
E++ EM + +I L A K+ + E+ C TY ++I
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN-GCNPDIVTYNSIIDG 451
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ D A+++ + G P + TFN LL GL + R DAE
Sbjct: 452 LCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAE 497
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 16/255 (6%)
Query: 18 DSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAW-----LFFNWVSRSRGFNHDRFTY 69
D A +LL NL K D T N +LK +++ W L N + D T+
Sbjct: 459 DDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDR-WEDAEQLMVNMMHSD--CPPDATTF 515
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T++ + + ++M E G + TY V+ L AG A+ + M
Sbjct: 516 NTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT- 574
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
P +++Y + + +++EA D+ + M+ GL P+ TY L + R +
Sbjct: 575 -NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDR 633
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKE 246
A+ + ++Q+ G+ PD N ++ C+ T I +M + Y + E
Sbjct: 634 AIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLE 693
Query: 247 ALQTFKVADENDSLL 261
AL + DE LL
Sbjct: 694 ALAYECLLDEAKQLL 708
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 58/138 (42%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY T++ +A ++ + +M G++ D +TY S+ + + D A+ +
Sbjct: 579 DLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML 638
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++ P Y + N R A D + M+ G P+ TY +L+E L
Sbjct: 639 CRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYE 698
Query: 185 GKYEEALEIFSKMQEAGV 202
+EA ++ + GV
Sbjct: 699 CLLDEAKQLLVNLCSLGV 716
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++RGF+ TYTT++ F A R+ + + + M+ +GI + VTYT+++ L + G+V
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212
Query: 118 DGAVNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A+ + +EMKL+ EC P +V+YT + L + + EMI G PN TYT
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYT 272
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L+ L + G + EA + ++M G + D N LI+ CK GE
Sbjct: 273 ALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGE 318
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTY +++ + ++ + + MQ +G + VTYT+++H AG VD
Sbjct: 120 KGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDA 179
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG--LPPNCYTYTVL 177
A++I +EM+ + P V+YTA ++ L V+ A V KEM RG PN TYT L
Sbjct: 180 AMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQL 239
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ L + G +E +E +M +G P+ A LI C+ G ++L M
Sbjct: 240 IHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEM 294
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +Y+ ++ + +I+ +F M+EKG D+ TY +++ L ++ V++
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM+ + PT+V+YT + RV A D+ EM RG+ PN TYT L++ L
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 185 GKYEEALEIFSKMQEAGVQ--PDKAACNILIEKCCKAG 220
G+ E A+ + +M+ G + P+ LI C+ G
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 150/386 (38%), Gaps = 65/386 (16%)
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
+ D ++Y+ ++ L G + A+ I+ EM+ K P +Y + L + +++
Sbjct: 88 DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ EM RG P TYT L+ AG+ + A++I +M+ G+ P+ LI+ C
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207
Query: 218 KAGETRTIILILRYMK--ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
GE IL+L+ MK N + + + L+++ +F E I
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG-----LFEMGMEFLDEMIIS 262
Query: 276 ----NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
N+A T I G L +K + + LL+ ++ +LD + +++
Sbjct: 263 GCFPNNAT--YTALIHG-----------LCQKGSFLEAAVLLNEMVAIGCELDVVIYNSL 309
Query: 332 IEVNCDHRRRDGA----LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
I+ C D A +L E V D+ Y +LI L + +++EM
Sbjct: 310 IDGLCKMGELDFAREMQILMVEKGVAPDV----FTYTSLIQGLCDAGLLDEALGLMQEMR 365
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
G ++P + TYT LI + A D A
Sbjct: 366 AKG-----------------------------IVPN----SVTYTTLINGFTQADRTDHA 392
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGL 473
L++ M G+ P+ + +L L
Sbjct: 393 LQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D Y +++D + + + + LM EKG+ D TYTS++ L +AG +D A
Sbjct: 298 GCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEA 357
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +EM+ K P V+YT + DR A + EM GL P Y +L +
Sbjct: 358 LGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKS 417
Query: 181 L 181
L
Sbjct: 418 L 418
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 131/337 (38%), Gaps = 46/337 (13%)
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+Y+ + L + G+ EA+EIF +M+E G PD NILI CK + + ++ M
Sbjct: 93 SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLL----WQVHPQFSPEFISDNDAVEFVTTDIEG 288
+ + + + F A D+ + H +P ++ ++ + E
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212
Query: 289 PLSIDQGLVLILLKKK------NLVAIDSLLSGIMDKSI------QLDSAVISTIIEVNC 336
+I LVL +K + N+V L+ G+ K + LD +IS N
Sbjct: 213 ERAI---LVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNN- 268
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
Y ALI L + +F + A ++ EM G L V
Sbjct: 269 ------------------------ATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVV 304
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTM 454
+ LI L A ++ L+ E TYT+LI AG D+AL + + M
Sbjct: 305 IYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEM 364
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
KGI P+ T+ L+ G + R A E KS
Sbjct: 365 RAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKS 401
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++ + + M G +D V Y S++ L G++D A + M
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + +YT+ ++ L + EA + +EM +G+ PN TYT L+ +A +
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389
Query: 188 EEALEIFSKMQEAGVQP 204
+ AL++ ++M+ G+ P
Sbjct: 390 DHALQLVNEMKSNGLMP 406
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 11/160 (6%)
Query: 339 RRRDGALLAFEYSVKMDLNLERT---AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
RRR G + LN + T +Y I L K + EI EM + G +
Sbjct: 67 RRRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDS 126
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQ-----KCTATYTALIGVYFSAGSADKALKI 450
+ +LI+ L + SL+ E Q TYT LI + +AG D A+ I
Sbjct: 127 FTYNILINGLC---KDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDI 183
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
M +GI P+ T+ L+ GL G V A + KE K
Sbjct: 184 LDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMK 223
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTYT+++ +A + + + M+ KGI ++VTYT++++ + A D
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDH 391
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILF 147
A+ + EMK P Y K L+
Sbjct: 392 ALQLVNEMKSNGLMPAGDIYKILFKSLY 419
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 175/428 (40%), Gaps = 51/428 (11%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
K L F+ ++GF D+ +Y T+L+ + S + +++++ + V Y ++
Sbjct: 97 KKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTI 156
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L V+ A +++ EM + +P +++Y+ + L ++ EA + EMI + +
Sbjct: 157 IDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNI 216
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
PN YTYT+LM+ L + GK +EA + + M + GV+P+ + N L++ C GE +
Sbjct: 217 NPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQN--- 273
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
A Q F V +P S N
Sbjct: 274 -------------------AKQMFHT---------MVQKGVNPNVYSYN----------- 294
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
+ ID+ L K K + +LL ++ K++ ++ S++I+ C R AL
Sbjct: 295 --IMIDR-----LCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDL 347
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+ + Y +L+ L K K + +M + G Y LI L
Sbjct: 348 LKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK 407
Query: 408 ARRPVPAAKIFS-LLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
R A K+F LL + + TY +I G D+AL + M G P T
Sbjct: 408 GGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVT 467
Query: 466 FNVLLAGL 473
F +++ L
Sbjct: 468 FEIIIRSL 475
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 109/219 (49%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G N + ++Y M+D ++KR+ + + K + + VTY+S++ G +
Sbjct: 283 QKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRIT 342
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+++ +EM + +V+YT+ + L N + +AT ++ +M +RG+ PN YTYT L+
Sbjct: 343 SALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALI 402
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L + G+++ A ++F + G + + N++I CK G + + M+EN
Sbjct: 403 DGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCI 462
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
F+ +++ D+ND +H + + + D
Sbjct: 463 PDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRD 501
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 178/452 (39%), Gaps = 27/452 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FT +++ F +++ V + + G + +T ++M L G+V
Sbjct: 39 KGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKK 98
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+++ +++ + VSY + L + A + + + R PN Y +++
Sbjct: 99 SLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIID 158
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM---KENR 236
L + EA +++S+M G+ P+ + LI C AG+ +L M N
Sbjct: 159 GLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINP 218
Query: 237 LALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y + +AL + KV + + L P +S N ++ G
Sbjct: 219 NVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMD--------------G 264
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
LI + + ++ K + + + +I+ C +R D A+ + +
Sbjct: 265 YCLI----GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKN 320
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y +LI KL ++++EM G V L+ L + A
Sbjct: 321 MVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKAT 380
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+F + E Q TYTALI G A K+++ + KG ++ T+NV+++GL
Sbjct: 381 ALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGL 440
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
K G + +A K ++ + DAV E
Sbjct: 441 CKEGMLDEA---LAMKSKMEENGCIPDAVTFE 469
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 13 KYSTWDSAQDLLKNL-----PIKWDSYT-VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDR 66
K SA DLLK + P +YT + L + ++KA F + + RG ++
Sbjct: 337 KLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM-KERGIQPNK 395
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+TYT ++D + R + + +F+ + KG I+ TY ++ L G +D A+ + +
Sbjct: 396 YTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSK 455
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
M+ C P V++ ++ LF D+ +A + EMI + L
Sbjct: 456 MEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 146/378 (38%), Gaps = 70/378 (18%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P I+ + + L A ++K+M +G+ P+ +T +L+ G+ + +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
K+ + G QP+ N L++ C GE + L V + Q
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVK-----------KSLHFHDKVVAQGFQM--- 113
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
D V + T + GL I + L LL
Sbjct: 114 -----------------------DQVSYAT--------LLNGLCKIGETRSAL----KLL 138
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
I D+S + + + +TII+ C + + A++ +MD R + +I +
Sbjct: 139 RMIEDRSTRPNVVMYNTIIDGLCKDKLVNE---AYDLYSEMD---ARGIFPNVITYSTLI 192
Query: 374 NTFPKVAEIVE------EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--Q 425
F +++E EM + VY +L+ L + A + +++ ++ +
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
+Y L+ Y G A +++ TM +KG++P++ ++N+++ L K RV +A
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEA--- 309
Query: 486 RKEKKSIQADALSKDAVP 503
++ + L K+ VP
Sbjct: 310 ----MNLLREVLHKNMVP 323
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 180/440 (40%), Gaps = 54/440 (12%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
AW + V R G + +T M++ + ++ ++ + M+ KG+ D VTY +++
Sbjct: 241 AWEIYGEVVRG-GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI 299
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ G V+ A + + P +++Y A + L + A DV EM+Q GL
Sbjct: 300 NAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLT 359
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN TY L+ + R EA EIF +M GV PD + + LI + G ++
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 229 LRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVT--TD 285
R M+ + + ++ + F + +D+L + E ++ ++ VT T
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDAL------KMRDEMLARGCFMDVVTYNTF 473
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
+ G L KKK D L + ++++ + D +T+I C D AL
Sbjct: 474 LNG-----------LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
FE V+ +L ++ Y LI K + E+ ++M +
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK---------------- 566
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
++P+ +Y ++ + S+G +AL + M KGI P+L T
Sbjct: 567 -------------DIIPDH----ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVT 609
Query: 466 FNVLLAGLEKLGRVSDAEIY 485
N L+ G + G + A Y
Sbjct: 610 CNTLIKGYCRSGDMPKAYEY 629
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 8 VYKILKYSTWDSAQDLL---KNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRG 61
+Y + K +D A+D+L L + ++ T N +L + +A F+ +SR RG
Sbjct: 334 LYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR-RG 392
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D ++++++ + + F M+ GI D V YT ++ G + A+
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDAL 452
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ +EM + C+ +V+Y ++ L +A ++ EM++RG+ P+ YT+T L+
Sbjct: 453 KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ G ++AL +F M ++PDK N LI+ CKAGE
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 198/473 (41%), Gaps = 46/473 (9%)
Query: 29 IKWDSYTVNQVLKTHPPMEK--AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
I+ + YT+N ++ K +FF +G D TY T+++ + +
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ +G+ +TY ++++ L G D A ++ EM P +Y + +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
D + EA +++ EM +RG+ P+ +++ L+ L R G +AL F +M+ +G+ PD
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLA-------LRYPVFKEALQTFKVADENDS 259
ILI+ C+ G + M++ LA + Y F L K+ + D
Sbjct: 433 VIYTILIDGFCRNGALSDAL----KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488
Query: 260 LLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
L + V P+F + TT I G K N+ +L ++
Sbjct: 489 LFNEMVERGMVPDFYT-------FTTLIRG-----------YCKDGNMDKALNLFEAMVR 530
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+++ D +T+I+ C A ++ ++ D+ + +Y ++ P+
Sbjct: 531 TNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPE 590
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARR-PVPAA-----KIFS--LLPEDQKCTAT 430
+ ++M + G + LI G R +P A K+ S ++P+ + +
Sbjct: 591 ALNLCDQMLEKGIRPNLVTCNTLIK--GYCRSGDMPKAYEYLSKMISNGIIPD----SFS 644
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y LI Y + +KA + M ++G+ ++ T+N++L G G++ +AE
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAE 697
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D YT +++ + M+KA F + R+ D+ TY T++D F +A + K +
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN-LKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
++ M K I D ++Y +V++ ++G + A+N+ ++M K P +V+ +K
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ + +A + +MI G+ P+ ++Y L++ ++ E+A + ++M++ G+Q +
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Query: 209 CNILIEKCCKAGETRTIILILRYMKE 234
N+++ C G+ + +LR M E
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIE 705
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
I+ + T N ++K + M KA+ + + + S G D F+Y T++D + + +
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI-SNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ M+++G+ + +TY +++ G + A + +M P +Y++ +
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPN 170
D +KEA + EM+QRGL P+
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M GI D+ +Y +++ +++ A + EM+ + I++Y + +
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGK 692
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
++EA V ++MI+ G+ P+ TY+ L+ V +EA +M + G+ PD
Sbjct: 693 MQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
AF+ + +++ A L+G L++ EI E+ + G L VY ++++ L
Sbjct: 209 AFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALC 268
Query: 407 SARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
R+ S + E + A TY LI Y G ++A ++ + +G+ P L
Sbjct: 269 KDRKFENVMFFLSDM-EGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGL 327
Query: 464 GTFNVLLAGLEKLGRVSDAE 483
T+N +L GL K+G+ A+
Sbjct: 328 LTYNAILYGLCKIGKYDRAK 347
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 113/321 (35%), Gaps = 59/321 (18%)
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
Y +L+ V+A K E E F ++ GV ACN L+ + G
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWV----------- 238
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
L W+++ E V IE +
Sbjct: 239 -------------------------DLAWEIYG-------------EVVRGGIELNVYTL 260
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
+V L K + + LS + K + D +T+I C + A
Sbjct: 261 NIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSS 320
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ Y A++ L K+ + + +++ EM + G + L+ + +
Sbjct: 321 RGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILE 380
Query: 414 AAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A +IF +LP+ ++++LIGV G +AL ++ M R GI P +
Sbjct: 381 AQEIFDEMSRRGVLPD----LVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYT 436
Query: 468 VLLAGLEKLGRVSDAEIYRKE 488
+L+ G + G +SDA R E
Sbjct: 437 ILIDGFCRNGALSDALKMRDE 457
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 172/424 (40%), Gaps = 28/424 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
YT+++ +A + ++ E M+ KG D +TY +++H ++D A + EEM
Sbjct: 259 NYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM 318
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI-QRGLPPNCYTYTVLMEYLVRAGK 186
K + P I +Y + L R+ EA D+ + + PN +Y L++ +A +
Sbjct: 319 KSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAAR 378
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+A ++F +M AG PD + LI C AG L M ++ + PV+
Sbjct: 379 VNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSS 438
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ A E D+ S F S V + L++ L+ L K L
Sbjct: 439 VISGLCRAGELDAA--------STVFDS------MVANGCQPNLAVYNSLIYGLCKTGRL 484
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+ + ++ D T+I C R D A + S++ + + T+ +
Sbjct: 485 CDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVV 544
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SL 420
I L L +V +V G+S + A +I L A ++ +
Sbjct: 545 IASLRCLEQAQRVLRVV---LATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGI 601
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
P+ +T AL+G A A+ + M R G PS+GT++ LL L K G+ S
Sbjct: 602 KPDG----STVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPS 657
Query: 481 DAEI 484
+A +
Sbjct: 658 EAHV 661
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 181/460 (39%), Gaps = 31/460 (6%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHDRFTYTTMLDIFGEAKR 81
+K + D+ T N ++ H +++ + + +S F D FTY ++ AKR
Sbjct: 283 MKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKR 342
Query: 82 ISSMKYVF-ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+S + + L E + V+Y +++ S A V+ A ++ EM +P +V+Y+
Sbjct: 343 LSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYS 402
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
++ L R EA +EM+ + + P Y+ ++ L RAG+ + A +F M
Sbjct: 403 TLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVAN 462
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADEN 257
G QP+ A N LI CK G L ++ M E + + Y L + DE
Sbjct: 463 GCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDE- 521
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ-GLVLILLKKKNLVAIDSLLSGI 316
A + +E + I + +++ + L +L +
Sbjct: 522 --------------------ACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVV 561
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+ + +T+IE C A E + + + + AL+G + + +
Sbjct: 562 LATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKA 621
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTA 433
+EEM + G V + L++ L A +P A + L C Y
Sbjct: 622 VVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVG 681
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
LI Y + ++A + + + K S+ +N LL GL
Sbjct: 682 LIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGL 721
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 182/506 (35%), Gaps = 107/506 (21%)
Query: 29 IKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK-RIS 83
+KW+ V +L E A +FF W + F H TY + F EA R
Sbjct: 49 MKWNGQLSQRLVGVILHMVKNGESAMVFFGWAGTRQDFRHTVHTY----NCFYEALIRTG 104
Query: 84 SMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS-- 138
+ + L +EK + D++TY ++ L N G + A +++EEM + P +++
Sbjct: 105 QCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCK 164
Query: 139 ------------------------------YTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+T + LF RV EA ++EM +P
Sbjct: 165 FLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIP 224
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
N +TYTV++ LV+AGK EA + +M P A +I CKAG+ +
Sbjct: 225 NN-WTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHL 279
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
L MK + + E D + S +F+ D T DI
Sbjct: 280 LEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPD-----IFTYDI-- 332
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
L+ L + K L LL + ++
Sbjct: 333 -------LIAGLCRAKRLSEARDLLGTLRNED---------------------------- 357
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
D +Y LI K ++ EM AG V + LI L +A
Sbjct: 358 ------DCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNA 411
Query: 409 RRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
R A +LP+ Y+++I AG D A ++ +M G P+
Sbjct: 412 GRASEAHSYLEEMVGKKILPK----VPVYSSVISGLCRAGELDAASTVFDSMVANGCQPN 467
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKE 488
L +N L+ GL K GR+ DA++ KE
Sbjct: 468 LAVYNSLIYGLCKTGRLCDAKLRVKE 493
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 8 VYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+ + K + A+ LL+++ IK D TV+ ++ +KA + ++ G
Sbjct: 577 IESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGS 636
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFE-LMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
TY+T+L+ +A + S V L+ D + Y ++ SN V+ A
Sbjct: 637 KPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEAR 696
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
N+ +E+K K +IV+Y +K LF ++ ++ +EM + N T+ +L++
Sbjct: 697 NVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGF 756
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
R G+ + A+ + S+M++ + P A L+++ +A
Sbjct: 757 CRLGQTDRAVRVLSEMKKV-LTPSAAIIKFLVDELARA 793
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA-VNIWEEMKLKECYPTIVS 138
K + +M ++ E+++ G TY+++++ L AG A V + + C+P +
Sbjct: 620 KAVVAMAFLEEMVR-LGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELW 678
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y + D+V+EA +V +E+ + + Y L++ L R + E+ +M+
Sbjct: 679 YVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMK 738
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++A NILI+ C+ G+T + +L MK+
Sbjct: 739 RNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKK 774
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 192/473 (40%), Gaps = 59/473 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ ++D F + R+ F+ M + GI Y S+++ GD+ A +++ EM
Sbjct: 402 TYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM 461
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K PT ++T+ + + +V++A +Y +MI G+ PN YT+T L+ L K
Sbjct: 462 TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA----LRYPV 243
EA E+F ++ E ++P + N+LIE C+ G+ +L M + L P+
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581
Query: 244 FKEALQTFKVADEND-----------------SLLWQVHPQFSPEFISDNDAVEFVTTDI 286
T +V+ D S L + Q + + + E + I
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
L L+ LK+ + LL + D+ ++ D+ + +++I+ A
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFE 701
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM-------------------T 387
++ V + Y AL+ L K + + + M T
Sbjct: 702 CWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLT 761
Query: 388 KAGH---SLGVYLGAL------------LIHRLGSARRPVPAAKIFSLLPED---QKCTA 429
K G+ ++G++ L +I R A K+ S + E+ C
Sbjct: 762 KEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDC-V 820
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY+ LI Y +G+ ++K++ TM +G+ P L +N+L+ G G + A
Sbjct: 821 TYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKA 873
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGD 116
RG N D + ++D A + K F+L M ++G+ D V YTS++ S G
Sbjct: 639 RGINMDLVCHAVLID---GALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGS 695
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
A W+ M +EC+P +V+YTA M L + A ++K M +PPN TY
Sbjct: 696 FKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGC 755
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++ L + G +EA+ + M + G+ + NI+I CK G +L M EN
Sbjct: 756 FLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTEN 813
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 99/505 (19%), Positives = 192/505 (38%), Gaps = 94/505 (18%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPME---KAWLFFNWVSRSRG 61
++ + K+ K+ T D N ++ D YT + V+++ ++ +A W+ + G
Sbjct: 197 LNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWM-EANG 255
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F+ TY ++ + R+S V + KG+ D VTY +++ + +
Sbjct: 256 FDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGI 315
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ +EM PT + + + L ++ +A ++ ++ + G PN + Y L+ L
Sbjct: 316 QLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSL 375
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ G ++A ++S M ++P+ +ILI+ C++G RL +
Sbjct: 376 CKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSG---------------RLDVAI 420
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
F +Q D + V+ S L+
Sbjct: 421 SYFDRMIQ--------DGIGETVYAYNS--------------------------LINGQC 446
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K +L A +SL + +K ++ + +++I C + A + + +
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVY 506
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+ ALI L N + +E+ +E+ + R+ P
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVE--------------------RKIKPTE------ 540
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
TY LI Y G DKA ++ + M +KG+ P T+ L++GL GRVS
Sbjct: 541 -------VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSK 593
Query: 482 AEIYRKEKKSIQADALSKDAVPMEE 506
A+ + D L K V + E
Sbjct: 594 AKDF--------IDDLHKQNVKLNE 610
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 19/233 (8%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHD--------- 65
D A +LL+++ K D+YT + P+ VS+++ F D
Sbjct: 557 DKAFELLEDMHQKGLVPDTYT-------YRPLISGLCSTGRVSKAKDFIDDLHKQNVKLN 609
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
Y+ +L + + R+ M ++GIN+D V + ++ D ++ +
Sbjct: 610 EMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLK 669
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+M + P V YT+ + K+A + + M+ PN TYT LM L +AG
Sbjct: 670 DMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAG 729
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + A +F +MQ A V P+ ++ K G + I + M + LA
Sbjct: 730 EMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLA 782
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/442 (19%), Positives = 166/442 (37%), Gaps = 46/442 (10%)
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV------ 137
++++ L K +N +Y ++H L ++ A ++ + L+E +P V
Sbjct: 86 ALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLD 145
Query: 138 -----------SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ ++ L+ R+ +A + K M L P T + L+ L++ K
Sbjct: 146 SYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRK 205
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ E+F + AGV+PD C+ ++ C+ + +R+M+ N L +
Sbjct: 206 FITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNV 265
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK-- 304
+ D + +V + ++ D V + T + G + Q I L +
Sbjct: 266 LIHGLCKGDRVSEAV-EVKRSLGGKGLA-ADVVTYCTL-VLGFCRLQQFEAGIQLMDEMV 322
Query: 305 --NLVAIDSLLSGIMD---KSIQLDSA-----------------VISTIIEVNCDHRRRD 342
++ +SG++D K ++D A V + +I C D
Sbjct: 323 ELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLD 382
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A L + M+L Y LI + + M + G VY LI
Sbjct: 383 KAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLI 442
Query: 403 HRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
+ A +F + + T+T+LI Y KA K+Y M GI
Sbjct: 443 NGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGIT 502
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P++ TF L++GL ++++A
Sbjct: 503 PNVYTFTALISGLCSTNKMAEA 524
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 80/185 (43%), Gaps = 2/185 (1%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
++ + T+ E + LF V R TY +++ + +I + E M +K
Sbjct: 512 ISGLCSTNKMAEASELFDELVERK--IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQK 569
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G+ D TY ++ L + G V A + +++ + + Y+A + R+ EA
Sbjct: 570 GLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEA 629
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
EMIQRG+ + + VL++ ++ + ++ M + G++PD +I+
Sbjct: 630 LSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDT 689
Query: 216 CCKAG 220
K G
Sbjct: 690 YSKEG 694
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + T+ ++ F + R V M E GI D VTY+++++ +G+V
Sbjct: 778 KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGA 837
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+V +W+ M + P +V+Y + +N + +A ++ +M++RG+ P+ +
Sbjct: 838 SVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD-------NK 890
Query: 180 YLVRAGKYEEA 190
YL + G EA
Sbjct: 891 YLQKKGTIFEA 901
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE--KGINIDAVT 103
M++A L F + ++ + TY LD + +MK L KG+ + VT
Sbjct: 731 MDRAGLLFKRM-QAANVPPNSITYGCFLD---NLTKEGNMKEAIGLHHAMLKGLLANTVT 786
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+ ++ G A + EM +P V+Y+ + + V + ++ M+
Sbjct: 787 HNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTML 846
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
RGL P+ Y +L+ G+ ++A E+ M G+ PD
Sbjct: 847 NRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDN 889
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 196/445 (44%), Gaps = 36/445 (8%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+T M+ + +A + V M+++ + D VT+ ++ AGD + A+ + +
Sbjct: 157 YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 216
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K P IV+Y + +K L + +A +V+KEM G+ P+ ++T+L+ R G+
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEAL+I+ +M+ G++PD + + LI + G+ + LR M+ L ++
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336
Query: 247 ALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+ F + +D+L + E + + VT + L+ L K++
Sbjct: 337 VIGGFCRAGLMSDAL------RVRDEMVGCGCLPDVVTYNT---------LLNGLCKERR 381
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
L+ + LL+ + ++ + D +T+I C + D AL F+ + L + Y
Sbjct: 382 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 441
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL---GSARRPVPAAKIF---- 418
LI + + K ++ ++M HS ++ + L + V A F
Sbjct: 442 LIDGMCRQGDLDKANDLWDDM----HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 497
Query: 419 ---SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+LP TY ++I Y +G+ K K + M + P L T+N L+ G K
Sbjct: 498 INKGILPN----IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 553
Query: 476 LGRVSDA--EIYRKEKKSIQADALS 498
++ DA + EK+ +Q D ++
Sbjct: 554 EDKMHDAFKLLNMMEKEKVQPDVVT 578
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
R RG D +++ ++ +F ++ +M Y+ E M+ G+ D V YT V+ AG
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE-MRCFGLVPDGVIYTMVIGGFCRAGL 346
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A+ + +EM C P +V+Y + L R+ +A + EM +RG+PP+ T+T
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L+ GK ++AL++F M ++PD N LI+ C+ G+
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 176/430 (40%), Gaps = 24/430 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G TY ++L + VF+ M + G+ D ++T ++ G+++
Sbjct: 219 SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIE 278
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I++EM+ + P +VS++ + + ++ A +EM GL P+ YT+++
Sbjct: 279 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 338
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
RAG +AL + +M G PD N L+ CK +L M+E +
Sbjct: 339 GGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVP 398
Query: 239 LRYPVFKEALQTFKVADENDSLLW----QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
F + + + + D L ++ + P+ ++ N T I+G
Sbjct: 399 PDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN-------TLIDG------ 445
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ ++ +L + L + + I + S +I+ +C+ + + A + +
Sbjct: 446 -----MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 500
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ Y ++I + K + +++M S + LIH + A
Sbjct: 501 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 560
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+ +++ ++ Q TY LI + G+ +A I++ MC KGI P T+ ++ G
Sbjct: 561 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 620
Query: 473 LEKLGRVSDA 482
G +A
Sbjct: 621 HVTAGNSKEA 630
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG D T+TT++ + ++ +F+ M + + D VTY +++ + GD+
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++W++M +E +P V+Y+ + +V++A EMI +G+ PN TY +
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ R+G + + KM V PD N LI K + +L M++ ++
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 572
Query: 238 ALRYPVFKEALQTFKVADENDSLLW 262
+ + F V W
Sbjct: 573 QPDVVTYNMLINGFSVHGNVQEAGW 597
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTH-------------PPMEKAWLFFNWVSRSRGFNH 64
D A DL WD ++ H +E A+ F + + ++G
Sbjct: 453 DKANDL-------WDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI-NKGILP 504
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ TY +++ + + +S + + M ++ D +TY +++H + A +
Sbjct: 505 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 564
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M+ ++ P +V+Y + ++ V+EA ++++M +G+ P+ YTY ++ V A
Sbjct: 565 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA 624
Query: 185 GKYEEALEIFSKMQEAGVQPD 205
G +EA ++ +M + G PD
Sbjct: 625 GNSKEAFQLHDEMLQRGFAPD 645
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN-----IDAVTYTSVMHWLSNAG 115
G + TY +L F + ++ F M+++G N D V+YT+V+H L AG
Sbjct: 240 GIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAG 299
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+D A +++EM + C P+I +Y A +++ V++A V+ +MI++G PN TYT
Sbjct: 300 QLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYT 359
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
VL+ L AGK + A+++ KM+ G +P+ N+LI + G+ + + M +
Sbjct: 360 VLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSK 418
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ + R +G+ + TYT ++ A +I + + M+ +G + TY
Sbjct: 336 VEDAVAVFDDMIR-KGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYN 394
Query: 106 SVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKE---ATDVYKE 161
++ +L GD++ A++++E M K +EC P +Y + +F+ R ++ A + E
Sbjct: 395 VLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVE 454
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
M+ RG P + + ++ L+ G E + E+ +MQE
Sbjct: 455 MVDRGYLPRRFMFNRVLNGLMLTGNQELSRELL-RMQE 491
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRK 457
++H LG A + A K+F + + CT ATY ALI V G+ + A+ ++ M RK
Sbjct: 291 VLHGLGVAGQLDKARKVFDEM-SREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRK 349
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA 482
G P++ T+ VL+ GL G++ A
Sbjct: 350 GYIPNVVTYTVLIRGLCHAGKIDRA 374
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 80/202 (39%), Gaps = 46/202 (22%)
Query: 25 KNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
+ PI ++ + V+ H A FF + RS G D + ++LD +++
Sbjct: 140 RTFPIMFERFAVSHRRPDH-----AVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGK 194
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+ + E+ DAVTY ++ DG W +K
Sbjct: 195 AASLVRAL-ERRFPPDAVTYNTL---------ADG----WCRVK---------------- 224
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG--- 201
A D+ ++M++ G+ P TY ++++ R+G+ + A + F +M++ G
Sbjct: 225 ------DTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSND 278
Query: 202 --VQPDKAACNILIEKCCKAGE 221
+PD + ++ AG+
Sbjct: 279 ENCKPDVVSYTTVLHGLGVAGQ 300
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TYT LI AG D+A+K+ M R+G P++ T+NVL+ L + G + A
Sbjct: 357 TYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKA 409
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ALI + K + ++M + G+ V +LI L A + A K+ +
Sbjct: 323 YNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMK 382
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR-KGIHPSLGTFNVLLAGLEKLGRV 479
+ + TY LIG F G +KAL +++TM + + P+ T+N++++ + R
Sbjct: 383 REGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRA 442
Query: 480 SDAEI 484
D +
Sbjct: 443 EDMAV 447
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 194/459 (42%), Gaps = 64/459 (13%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY------TTMLDIFGEAKRI 82
+ WD + + L + + A F+++ R+R +DR + ++ I G+ R+
Sbjct: 105 LSWDILGIIKGLGFNNKFDLALSLFDFI-RTR---NDRVSLLNGSVIAVIVSILGKTGRV 160
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
S + ++ G +D YTS++ +N A+ ++ +MK C PT+++Y A
Sbjct: 161 SRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAI 220
Query: 143 MKILF-LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK-YEEALEIFSKMQEA 200
+ + + + + ++M GL P+ TY L+ RAG YEEAL++F +++ A
Sbjct: 221 LNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLIS-CCRAGSLYEEALDLFEEIKVA 279
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
G +PD N L++ K+ R P KEA++ K + N
Sbjct: 280 GFRPDAVTYNALLDVYGKS--------------------RRP--KEAMEVLKQMESN--- 314
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
F P ++ N V+ + G L D ++LK+K ++DK
Sbjct: 315 ------SFRPSVVTYNS---LVSAYVRGGLLEDA----LVLKRK-----------MVDKG 350
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I+ D +T++ + + + A+ FE K+ + ALI + F ++
Sbjct: 351 IKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMV 410
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALIGVY 438
++ +E+ S + L+ G + +F + + T+ LI Y
Sbjct: 411 KVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAY 470
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
GS D+A+ YK M G+ P L T+N +LA L + G
Sbjct: 471 GRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGG 509
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 178/419 (42%), Gaps = 28/419 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D +TYTT+L F A + VFE M++ G + T+ +++ + G +
Sbjct: 349 KGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEE 408
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
V +++E+K+ +C P IV++ + + N E + V++EM + P T+ L+
Sbjct: 409 MVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLIS 468
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G +++A+ + +M EAGV PD + N ++ + G +L MK+
Sbjct: 469 AYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKP 528
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L + E + + + A E + I+ + + LVL+
Sbjct: 529 NEVTYSSLLHAYANGREVERM--------------NALAEEIYSGTIKTHAVLLKTLVLV 574
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR--RDGALLAFEYSVKMDLN 357
K LV + + I D + ++ + + + +L F Y + L+
Sbjct: 575 NSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLS 634
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR------LGSARRP 411
L T+Y +L+ + + F K +I E+ G V ++I+ + A+R
Sbjct: 635 L--TSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRI 692
Query: 412 VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+ K+ + +P+ TY I Y + +A+ + + M ++G P+ T+N ++
Sbjct: 693 IEEMKVPAPVPD----VVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIV 747
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+A+L F R RG + D T ML I+G K + + M E G+ + +Y S
Sbjct: 585 ERAFLEF----RKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNS 640
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M+ S + + I+ E+ K P ++SY + ND + EA + +EM
Sbjct: 641 LMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPA 700
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
P+ TY + + EA+++ M + G +P+ N +++ CK
Sbjct: 701 PVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCK 752
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +++ ++ + + +F + +KGI D ++Y V++ +D A I EEM
Sbjct: 637 SYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEM 696
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K+ P +V+Y ++ + EA DV + MI++G PN TY ++++ +
Sbjct: 697 KVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLR 756
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+EA + + Q + + L+E+ K
Sbjct: 757 DEACSFVQNLGDLDPQISEDEKSRLLERIAK 787
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 193/499 (38%), Gaps = 73/499 (14%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV----TY 104
A FN V GF H TY M++ G + +M+ V M++ N+D+ Y
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK---NVDSKMLEGVY 79
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+M G V AVN++E M +C P++ SY A M IL +A VY M
Sbjct: 80 IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139
Query: 165 RGLPPNCYTYTVLMEYLVRAGK------------------------------YEE----- 189
G+ P+ YT+T+ M+ G+ Y+E
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR-TIILILRYMKENRLA--LRYPVFKE 246
A +F +M + G+ PD N LI CK G + + L + MK + +F +
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 247 ALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAV-----------------EFVTTDIEG 288
L DE LL V +P+ IS N + + V + +E
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
++ K + D +L M K D S++I C+ + A+ F
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+++ Y L+ L K + +++++M + G S ++ L+++ L
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439
Query: 409 RRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
A I + +P+ T+ LI Y + DKA++I TM GI P
Sbjct: 440 GCLSDANGILNDAIAKGCIPD----IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495
Query: 463 LGTFNVLLAGLEKLGRVSD 481
+ T+N LL GL K ++ +
Sbjct: 496 VITYNTLLNGLCKARKLDN 514
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D FT+ T++D + + + + + + M GI D +TY ++++ L A +D
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
V+ ++ M K C P I++Y ++ + +V EA +++KEM RGL P+ T L+
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 179 EYLVRAGKYEEALEIFSKMQ-EAGVQPDKAACNILIEKCC 217
L G+ ++A E+F ++ E A NI+I C
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFC 613
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 1/193 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M +A F + + +GF H Y T++ + + + + M E G + D TY
Sbjct: 372 MNRAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
V++ L G + A I + K C P I ++ + + +A ++ M+
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ TY L+ L +A K + ++ F M E G P+ NILIE CK +
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550
Query: 226 ILILRYMKENRLA 238
+ + + MK L
Sbjct: 551 MELFKEMKTRGLT 563
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + D +TY +++ + +S + KG D T+ +++ ++D
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK 479
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I + M P +++Y + L ++ D +K M+++G PN TY +L+E
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYMKENRLA 238
+ K EA+E+F +M+ G+ PD LI C GE + L + KE + +
Sbjct: 540 SFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599
Query: 239 LRYPVFKEALQTF 251
+F + F
Sbjct: 600 YSTAIFNIMINAF 612
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+Y A++ IL++ F + ++ M G VY + + RP A ++ + +
Sbjct: 113 SYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM 172
Query: 422 PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P Q C +Y A+I ++ +A ++ M ++GI P + TFN L+ L K G
Sbjct: 173 P-GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGN 231
Query: 479 VSDAE 483
V ++E
Sbjct: 232 VQESE 236
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+Y A+I K N + + +EM K G + LIH L + K+FS +
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242
Query: 422 PEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ C T+ I G+ D+A ++ +++ +G+ P + ++N L+ G K ++
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 480 SDAEIY 485
+AE Y
Sbjct: 303 VEAECY 308
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 191/473 (40%), Gaps = 72/473 (15%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D +T + ++D F +R+ VF M + G+ DAVT+ ++++ L G A
Sbjct: 125 GLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V +++ + C PT+ YTYT ++
Sbjct: 185 VEFFDDFEASGCQPTV-----------------------------------YTYTTIING 209
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
L + G+ A +F KM+EAG QP+ NILI+ CK + I YMK R++
Sbjct: 210 LCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPD 269
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
Y + L F+ E +LL ++ P + N V+ + EG +S QG+
Sbjct: 270 IFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICK--EGKVSEAQGV 327
Query: 297 VLILLK---KKNLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCD 337
+ + + ++V SL+ G ++ K + D+ + +I+ C
Sbjct: 328 FKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCK 387
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+R D A F + L + Y LI L +L + ++ + M G+ ++
Sbjct: 388 AKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFT 447
Query: 398 GALLIHR------LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
++L+ LG A R + L P+ A Y LI G+ A K++
Sbjct: 448 YSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPD----IAMYNILIDAMCKFGNLKDARKLF 503
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQADALSKDAV 502
+ +G+ P++ + ++ L K G + +A E +R E D S + +
Sbjct: 504 SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVI 556
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 172/407 (42%), Gaps = 28/407 (6%)
Query: 102 VTYTSVMHWLSNAGDVDGAV-NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK 160
+ +T ++ + G GAV ++ ++M+L P I + + + RV A V+
Sbjct: 95 IQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFS 154
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+MI+ GL P+ T+ L+ L + GK+ +A+E F + +G QP +I CK G
Sbjct: 155 KMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIG 214
Query: 221 ETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADEN-DSLLWQVHPQFSPEFISDN 276
ET + + M+E + Y + ++L K+ +E D + + SP+ + N
Sbjct: 215 ETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYN 274
Query: 277 DAVEFVTTD---IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS-IQLDSAVISTII 332
++ + E +++ L ++ N+ + L+ I + + V T+
Sbjct: 275 SLIQGLCNFRRWKEASALLNEMTSLNIM--PNIFTFNVLVDAICKEGKVSEAQGVFKTMT 332
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI-----------GILI----KLNTFP 377
E+ + + L + YS++M++ R + A+I ILI K
Sbjct: 333 EMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRID 392
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALI 435
+ ++ EM G + LIH L R A +F + + TY+ L+
Sbjct: 393 EAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLL 452
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ G KA ++++ M + P + +N+L+ + K G + DA
Sbjct: 453 DGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 35/165 (21%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D F+Y ++ + +AKRI K +F M +G+ D V Y +++H L G
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG--- 424
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
R++EA D++K M G P+ +TY++L+
Sbjct: 425 --------------------------------RLREAQDLFKNMHSNGNLPDLFTYSMLL 452
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ + G +A +F MQ ++PD A NILI+ CK G +
Sbjct: 453 DGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLK 497
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++ + D FTY +++ +R + M I + T+ ++ + G V
Sbjct: 262 KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKV 321
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +++ M P +V+Y++ M L + EA ++ MI +G P+ ++Y +L
Sbjct: 322 SEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNIL 381
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++ +A + +EA ++F++M G+ PD N LI C+ G R + + M N
Sbjct: 382 IKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 67/144 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
S G D FTY+ +LD F + + +F +MQ + D Y ++ + G++
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A ++ E+ ++ P + YT + L + EA + ++ M G PP+ ++Y V+
Sbjct: 497 KDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVI 556
Query: 178 MEYLVRAGKYEEALEIFSKMQEAG 201
+ ++ A ++ +M++ G
Sbjct: 557 IRGFLQYKDESRAAQLIGEMRDRG 580
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 166/424 (39%), Gaps = 59/424 (13%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y +++ F + RI V + M+ K + D VTY ++ L + G +D A+ +
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 212
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+++ C PT+++YT ++ L V EA + EM+ RGL P+ +TY ++ + +
Sbjct: 213 DQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKE 272
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G + A E+ ++ G +PD + NIL+ G+
Sbjct: 273 GMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGK----------------------- 309
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
W+ + + S+ VT I L+ L +
Sbjct: 310 -----------------WEEGEKLMTKMFSEKCDPNVVTYSI---------LITTLCRDG 343
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ +LL + +K + D+ +I C R D A+ E + + Y
Sbjct: 344 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 403
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------ 418
++ L K + EI ++ + G S + L S+ + A +
Sbjct: 404 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSN 463
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ P++ TY ++I G DKA ++ M HPS+ T+N++L G K R
Sbjct: 464 GIDPDE----ITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 519
Query: 479 VSDA 482
+ DA
Sbjct: 520 IEDA 523
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAG 115
SRG D FTY T+ I G K + FE+++ KG D ++Y ++ L N G
Sbjct: 252 SRGLKPDMFTYNTI--IRGMCKE-GMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQG 308
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ + +M ++C P +V+Y+ + L + +++EA ++ K M ++GL P+ Y+Y
Sbjct: 309 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 368
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ R G+ + A+E M G PD N ++ CK G+ + I + E
Sbjct: 369 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 427
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 35/210 (16%)
Query: 58 RSRGFNHDRFTYTTML-DIFGEAKRISSMKYVFELMQE---------------------- 94
RS+ F+ D TY M+ + K ++K + +L+ +
Sbjct: 181 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGV 240
Query: 95 ------------KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+G+ D TY +++ + G VD A + ++LK C P ++SY
Sbjct: 241 DEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNIL 300
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
++ L + +E + +M PN TY++L+ L R GK EEA+ + M+E G+
Sbjct: 301 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 360
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYM 232
PD + + LI C+ G I L M
Sbjct: 361 TPDAYSYDPLIAAFCREGRLDVAIEFLETM 390
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 61 GFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + + +Y TM ++ +I ++ + E M GI+ D +TY S++ L G VD
Sbjct: 429 GCSPNSSSYNTMFSALWSSGDKIRALHMILE-MVSNGIDPDEITYNSMISCLCREGMVDK 487
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M+ E +P++V+Y + R+++A DV M+ G PN TYTVL+E
Sbjct: 488 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIE 547
Query: 180 YLVRAGKYEEALEI 193
+ AG EA+E+
Sbjct: 548 GIGFAGYRAEAMEL 561
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 73/178 (41%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D ++Y ++ F R+ E M G D V Y +V+ L G
Sbjct: 356 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 415
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I+ ++ C P SY L+ + A + EM+ G+ P+ TY +
Sbjct: 416 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSM 475
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ L R G ++A E+ M+ P NI++ CKA I +L M N
Sbjct: 476 ISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGN 533
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
AY ALI K+N +++ M S ++I L S + A K+ L
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
D Q TYT LI G D+ALK+ M +G+ P + T+N ++ G+ K G V
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275
Query: 480 SDA-EIYRK-EKKSIQADALS 498
A E+ R E K + D +S
Sbjct: 276 DRAFEMIRNLELKGCEPDVIS 296
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 196/445 (44%), Gaps = 36/445 (8%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+T M+ + +A + V M+++ + D VT+ ++ AGD + A+ + +
Sbjct: 96 YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 155
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K P IV+Y + +K L + +A +V+KEM G+ P+ ++T+L+ R G+
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 215
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEAL+I+ +M+ G++PD + + LI + G+ + LR M+ L ++
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275
Query: 247 ALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+ F + +D+L + E + + VT + L+ L K++
Sbjct: 276 VIGGFCRAGLMSDAL------RVRDEMVGCGCLPDVVTYNT---------LLNGLCKERR 320
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
L+ + LL+ + ++ + D +T+I C + D AL F+ + L + Y
Sbjct: 321 LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 380
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL---GSARRPVPAAKIF---- 418
LI + + K ++ ++M HS ++ + L + V A F
Sbjct: 381 LIDGMCRQGDLDKANDLWDDM----HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 436
Query: 419 ---SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+LP TY ++I Y +G+ K K + M + P L T+N L+ G K
Sbjct: 437 INKGILPN----IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 492
Query: 476 LGRVSDA--EIYRKEKKSIQADALS 498
++ DA + EK+ +Q D ++
Sbjct: 493 EDKMHDAFKLLNMMEKEKVQPDVVT 517
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/477 (20%), Positives = 196/477 (41%), Gaps = 40/477 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G TY ++L + VF+ M + G+ D ++T ++ G+++
Sbjct: 158 SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIE 217
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I++EM+ + P +VS++ + + ++ A +EM GL P+ YT+++
Sbjct: 218 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 277
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
RAG +AL + +M G PD N L+ CK +L M+E +
Sbjct: 278 GGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVP 337
Query: 239 LRYPVFKEALQTFKVADENDSLLW----QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
F + + + + D L ++ + P+ ++ N T I+G
Sbjct: 338 PDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN-------TLIDG------ 384
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ ++ +L + L + + I + S +I+ +C+ + + A + +
Sbjct: 385 -----MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 439
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ Y ++I + K + +++M S + LIH + A
Sbjct: 440 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 499
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+ +++ ++ Q TY LI + G+ +A I++ MC KGI P T+ ++ G
Sbjct: 500 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 559
Query: 473 LEKLG------RVSDAEIYR-KEKK---------SIQADALSKDAVPMEEKICDLLY 513
G ++ D + R KEK+ +IQ A S +PM+ K+ +Y
Sbjct: 560 HVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQNSAESLKQMPMDLKVTCSIY 616
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
R RG D +++ ++ +F ++ +M Y+ E M+ G+ D V YT V+ AG
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE-MRCFGLVPDGVIYTMVIGGFCRAGL 285
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A+ + +EM C P +V+Y + L R+ +A + EM +RG+PP+ T+T
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L+ GK ++AL++F M ++PD N LI+ C+ G+
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG D T+TT++ + ++ +F+ M + + D VTY +++ + GD+
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 391
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++W++M +E +P V+Y+ + +V++A EMI +G+ PN TY +
Sbjct: 392 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ R+G + + KM V PD N LI K + +L M++ ++
Sbjct: 452 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 511
Query: 238 ALRYPVFKEALQTFKVADENDSLLW 262
+ + F V W
Sbjct: 512 QPDVVTYNMLINGFSVHGNVQEAGW 536
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/470 (20%), Positives = 180/470 (38%), Gaps = 88/470 (18%)
Query: 27 LPIKWDSYTVNQVLKTHP-PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+P++ + +V++ P +E++W F+ V S G+ + F + ++ F + + S
Sbjct: 103 VPVQGCENLLRRVVRLRPVELERSWAFYLEVLDS-GYPPNFFFFNVLMHGFCKVGGVGSA 161
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ VF+ + ++G+ V++ +++ AG V+ + M+ + P + +++A +
Sbjct: 162 RLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALING 221
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L R+ E + ++ EM +GL PN T+TVL++ + GK + AL+ F M GV+PD
Sbjct: 222 LCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPD 281
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
N LI CK G+ + ++ M + L
Sbjct: 282 LVTYNALINGLCKVGDLKEARRLVNEMSASGL---------------------------- 313
Query: 266 PQFSPEFISDNDAVEFVTT--DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
P+ I+ ++ D+E L I + +V ++ I+L
Sbjct: 314 ---RPDRITFTTLIDGCCKYGDMESALEIKRRMV--------------------EEGIEL 350
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D + +I C R A + + Y ++ K +++
Sbjct: 351 DDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLL 410
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
+EM GH GV TY AL+ G
Sbjct: 411 KEMQSDGHVPGV---------------------------------VTYNALMNGLCKQGQ 437
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
A + M G+ P+ T+N+LL G K G D +I+ EK ++
Sbjct: 438 VKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSEKGLVK 487
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T+T LI G D ALK ++ M +G+ P L T+N L+ GL K+G + +A R+
Sbjct: 249 TFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA---RRLV 305
Query: 490 KSIQADALSKDAV 502
+ A L D +
Sbjct: 306 NEMSASGLRPDRI 318
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 186/441 (42%), Gaps = 53/441 (12%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A FFN + G R TY ++ F + R+ + +E M+ +GI+ D VTY +++
Sbjct: 238 AKRFFNKM-LDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMI 296
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ ++ A ++ EMK K+ PT++SYT +K F DR+ + + +EM G+
Sbjct: 297 NGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEMKSVGIK 356
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIIL 227
PN TYT L+ L AGK EA +I +M + P D + L+ CKAG+ + +
Sbjct: 357 PNNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVD 416
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
+L M + + + ++ F A+E D AV+FV IE
Sbjct: 417 VLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQ------------------AVKFVDKLIE 458
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
I+L+ ++ +++++S + +I+ C H + A +
Sbjct: 459 ND---------IILRPQS--------------TLEMESGAYNPVIQYLCSHGQTGKAEIL 495
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F +K + + A+ LI K T EI++ M + G LLI
Sbjct: 496 FRQLLKKGVE-DPLAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLR 554
Query: 408 ARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
P A + ED ++ + +++ + G A ++ K+M KG+ ++
Sbjct: 555 KGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMDL 614
Query: 466 FNVLLAGL-------EKLGRV 479
+L L E LGR+
Sbjct: 615 VAKILEALLMRGHEEEALGRI 635
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 190/474 (40%), Gaps = 25/474 (5%)
Query: 21 QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
Q+ ++ L ++D V VL + A FF WV R+ HDR T+ ++ I G
Sbjct: 103 QNSIRALVPEFDHSLVYNVLHGARKPDHALQFFRWVERAGLIQHDRETHMKIIQILGRYS 162
Query: 81 RISSMK-YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
++ + V E M +KG +D + ++ AG V +V ++ +MK ++ SY
Sbjct: 163 MLNHARCIVLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSY 222
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
A K++ R A + +M+ G+ P +TY VL+ + + A+ + M+
Sbjct: 223 NALFKVIVRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKV 282
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE-ND 258
G+ PD N +I + + MK +A + ++ + D ND
Sbjct: 283 RGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRIND 342
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
L ++ + I N+ VT P D G K A D L +
Sbjct: 343 GL--RLLEEMKSVGIKPNN----VTYTTLLPDLCDAG--------KMTEAKDILKEMVRR 388
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ D+++ ++ C A+ + +K+ + E Y LI K + +
Sbjct: 389 RIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIENFCKAEEYDQ 448
Query: 379 VAEIVEEMT------KAGHSLGVYLGAL--LIHRLGSARRPVPAAKIF-SLLPEDQKCTA 429
+ V+++ + +L + GA +I L S + A +F LL + +
Sbjct: 449 AVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVEDPL 508
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ LI + G+ D A +I K M RKGI + +L+ + G +DA+
Sbjct: 509 AFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGEPADAK 562
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 193/465 (41%), Gaps = 48/465 (10%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY ++ F A I +F+ M+ KG + VTY +++ +D +
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M LK P ++SY + L R+KE + V EM +RG + TY L++ + G
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR---YPV 243
+ +AL + ++M G+ P LI CKAG + L M+ L Y
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 244 FKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAV--EFVTTDIEGPLSIDQGLVLIL 300
+ +E +L +++ FSP ++ N + VT +E ++ VL
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA-----VLED 440
Query: 301 LKKKNL----VAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCDHRR 340
+K+K L V+ ++LSG +++K I+ D+ S++I+ C+ RR
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
A +E +++ L + Y ALI K ++ EM + G V ++
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 401 LIHRLGSARRPVPAAKIFSLL------PED-------QKCT----ATYTALIGVYFSAGS 443
LI+ L R A ++ L P D + C+ + +LI + G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+A +++++M K P +N+++ G + G + A KE
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF+ TY +++ ++ V E M+EKG++ D V+Y++V+ + DVD A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + EM K P ++Y++ ++ R KEA D+Y+EM++ GLPP+ +TYT L+
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G E+AL++ ++M E GV PD ++LI K TR
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 174/423 (41%), Gaps = 30/423 (7%)
Query: 88 VFELMQEKGINIDAVTYTSVMH-WLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ L Q G ++Y +V+ + + ++ A N+++EM + P + +Y ++
Sbjct: 156 IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ A ++ +M +G PN TY L++ + K ++ ++ M G++P+
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQ-- 263
+ N++I C+ G + + +L M +L + ++ + K + + +L+
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 264 -VHPQFSPEFIS-------------DNDAVEFVTTDIEGPLSIDQGLVLILL----KKKN 305
+ +P I+ N A+EF+ L ++ L+ +K
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+ +L + D + +I +C + + A+ E + L+ + +Y
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL----- 420
++ + + + EM + G + LI RR A ++
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
LP D+ TYTALI Y G +KAL+++ M KG+ P + T++VL+ GL K R
Sbjct: 516 LPPDE---FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 481 DAE 483
+A+
Sbjct: 573 EAK 575
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 84/164 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G TYT+++ +A ++ + M+ +G+ + TYT+++ S G ++
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + EM P++V+Y A + + ++++A V ++M ++GL P+ +Y+ ++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
R+ +EAL + +M E G++PD + LI+ C+ T+
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 164/398 (41%), Gaps = 23/398 (5%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY S++ WL G + A +W++M K PT VSY + + + A V+ +M
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ GL PN TY++LM+ + G E A +F +M + + P NI I CK G T
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPE------- 271
+L+ E + + F V+ + SP
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634
Query: 272 ---FISDNDA-------VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
F +N+ E +E ++ L+ KK+++ L S ++D +
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
+S + +++I + + AL + + ++ + Y LI L+K +
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYF 439
+ EM+ G + + +LI+ L + A KI + + D Y ALI +F
Sbjct: 755 LYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHF 814
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
AG+ +A +++ M KG+ P+ T+++L+ G K G
Sbjct: 815 KAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 165/436 (37%), Gaps = 21/436 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D FT M+ + K F + +G+ +DA Y+ V+ DV+
Sbjct: 238 KGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVEL 297
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + ++M+ K P+ ++T+ + + EA + EM+ G+ N T L++
Sbjct: 298 ACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVK 357
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ K ALE F KM E G P++ +LIE CCK G + MK +
Sbjct: 358 GYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICP 417
Query: 240 RYPVFKEALQTF-KV-ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ ++ F KV + E S L+ E V DI + + L+
Sbjct: 418 TVFIVNSLIRGFLKVESREEASKLFD----------------EAVACDIANIFTYNS-LL 460
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L K+ + +L ++DK + +++I +C D A F + L
Sbjct: 461 SWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLK 520
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y L+ K + + M + + I+ L R A +
Sbjct: 521 PNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDM 580
Query: 418 FSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
E TY +++ + GS AL Y+ MC G+ P++ T+ L+ G K
Sbjct: 581 LKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCK 640
Query: 476 LGRVSDAEIYRKEKKS 491
A R E ++
Sbjct: 641 NNNTDLALKMRNEMRN 656
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 177/410 (43%), Gaps = 30/410 (7%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D Y +++ A ++ A+ + + + P I + L ND + EA +VY
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
++M+ +G+ +C+T ++M ++ EEA + F + + GV+ D AA +I+I+ CK
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKN 292
Query: 220 GETRTIILILRYMKENRLALRYPVFKEAL----------QTFKVADENDSLLWQVHPQFS 269
+ +L+ M++ F + + ++ DE S Q++ +
Sbjct: 293 LDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVA 352
Query: 270 PEFISDN-------DAVEFVTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMD 318
+ A+EF E S ++ +L+ K N+ L + + +
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN 412
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
K+I +++++I R+ A F+ +V D+ Y +L+ L K +
Sbjct: 413 KNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSE 471
Query: 379 VAEIVEEMTKAGHSLG--VYLGALLIH-RLGSARRPVPAAKIFSLLPED--QKCTATYTA 433
+ ++M G + Y +L H R G+ AA +FS + + + TY+
Sbjct: 472 ATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDM---AASVFSDMLDCGLKPNVITYSI 528
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
L+ YF G + A ++ M + I PS T+N+ + GL K+GR S+A+
Sbjct: 529 LMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQ 578
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R++G D Y ++D F + + I + ++F + + G++ ++V Y S++ N ++
Sbjct: 655 RNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNM 714
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+N+ + M + + +YT + L R+ A D+Y EM +G+ P+ YTVL
Sbjct: 715 EAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVL 774
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ L G+ E A +I ++M+ + P+ N LI KAG
Sbjct: 775 INGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAG 817
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
+WLF + G + + Y +++ + + + + + M +GI+ D TYT+++
Sbjct: 683 SWLFSELLDG--GLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLI 740
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
L G + A++++ EM K P I+ YT + L +++ A + EM + +
Sbjct: 741 DGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSIT 800
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
PN Y L+ +AG +EA + ++M + G+ P+ +ILI K G +
Sbjct: 801 PNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNS 854
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 171/429 (39%), Gaps = 26/429 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVD 118
G D F+YTT+L K+ + +M E G N + V+YT+V+H GDV
Sbjct: 210 GCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVG 269
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ +M P +V+ + + L + +A V ++MI + PNC TY L+
Sbjct: 270 KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLI 329
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKEN 235
+ +G++ EA+ I +M G +P+ ++LI+ CK+G E R I + +
Sbjct: 330 HGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQK 389
Query: 236 RLALRYPVFKEALQT-FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
A Y T + D N+ V P N IE
Sbjct: 390 PNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFN---------IE------- 433
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ K L + + + D +T+I+ C R D A+ F +
Sbjct: 434 --IYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDD 491
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L+ + + LI + K E+ EM G V +I +L + A
Sbjct: 492 GLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEA 551
Query: 415 AKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F L+P + +Y +I YF AG + +K+ M G+ P+ TFN LL G
Sbjct: 552 RKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 611
Query: 473 LEKLGRVSD 481
+ +G D
Sbjct: 612 MVSMGLKPD 620
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A L FN + + +GF D YTT++D + R+ F M + G++ D +T+
Sbjct: 443 LDEASLTFNKMQQ-QGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFN 501
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H + G + A ++ EM + P + ++ + + LF +V EA ++ M +
Sbjct: 502 TLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA 561
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSK-------------------MQEAGVQPDK 206
G PN +Y ++ AG+ E +++ M G++PD
Sbjct: 562 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDV 621
Query: 207 AACNILIEKCCKAGETRTIILILRYM 232
C LI+ CC+ G I+ + R M
Sbjct: 622 VTCKTLIDSCCEDGRIEDILTLFREM 647
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 154/370 (41%), Gaps = 40/370 (10%)
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE-------ALEIFSKMQEAG---V 202
++A D++ E++QR P + Y L+ + RA A+ +F++M AG V
Sbjct: 81 EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
PD A ILI CC AG L + + L + F L+T A++ S
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTL-CAEKRTSDAM 199
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQGLVLILLKKK-------NLVAIDSL 312
+ + PE D + TT ++G + ++ LI + + N+V+ ++
Sbjct: 200 NIVLRRMPELGCTPDVFSY-TTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTV 258
Query: 313 LSG----------------IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ G ++D I + +++I+ C + D A + + +
Sbjct: 259 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHI 318
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
T Y +LI + + + I++EM++ G V ++LI L + A +
Sbjct: 319 MPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEARE 378
Query: 417 IF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
IF S++ QK A TY +L+ Y + G+ + M + G+ P FN+ +
Sbjct: 379 IFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYC 438
Query: 475 KLGRVSDAEI 484
K GR+ +A +
Sbjct: 439 KCGRLDEASL 448
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 170/416 (40%), Gaps = 24/416 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + T+L+ +A ++ + + M EKG+ D+ TY+ ++ ++ A
Sbjct: 341 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 400
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +EMK ++ PT+++Y+ + L ++ + +EM+ GL PN YT LM
Sbjct: 401 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 460
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ EE+ I +M+E G+ PD N LI CKA L M E RL
Sbjct: 461 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 520
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + + A E + I+D E ++ + + I L+
Sbjct: 521 AHTYGAFIDGYSKAGEME--------------IADRYFNEMLSCGVLPNVGIYTALIEGH 566
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K+ N+ S+ I+ + + D S +I + + A F + L
Sbjct: 567 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 626
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-- 418
Y +LI K K ++++EEM G + + +LI L A A +F
Sbjct: 627 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 686
Query: 419 ----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
L P TY A++ Y + + A ++ + M +G+ P +NV+L
Sbjct: 687 IEGRGLTPN----CVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 738
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 186/442 (42%), Gaps = 47/442 (10%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D F Y +++ F +AKR+ + M E+ + +A TY + + S AG++
Sbjct: 478 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 537
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + EM P + YTA ++ V EA V++ ++ R + + TY+VL
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 597
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM---KE 234
+ L R GK EA IFS++QE G+ P+ N LI CK G +L M
Sbjct: 598 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 657
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG----PL 290
N + Y + + L + +L DIEG P
Sbjct: 658 NPDIVTYNILIDGLCKAGEIERAKNLF----------------------DDIEGRGLTPN 695
Query: 291 SID-QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
+ +V K KN A LL ++ + + D+ + + I+ C + + AL F+
Sbjct: 696 CVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQ 755
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK----AGHSLGVYLGALLIHR- 404
++ ++ LI K + ++EEM + H V +L+ H
Sbjct: 756 EMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH---VTYTSLIDHNC 811
Query: 405 ----LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
+G A+R + +++P + TYT+L+ Y + G+ + +++ M KGI
Sbjct: 812 KAGMMGEAKRLWLEMQERNVMPTAK----TYTSLLHGYHNIGNMSEVSALFEEMVAKGIE 867
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P T+ V++ + G V +A
Sbjct: 868 PDKMTYYVMIDAYCREGNVMEA 889
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 104/198 (52%), Gaps = 2/198 (1%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L + M +A+ F+ + + +G + FTY +++ + + + E M KGIN
Sbjct: 601 LSRNGKMHEAFGIFSEL-QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINP 659
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D VTY ++ L AG+++ A N++++++ + P V+Y A + + A +
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLL 719
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+EM+ RG+PP+ + Y V++ + + K+E+AL++F +M E G + N LIE CK+
Sbjct: 720 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKS 778
Query: 220 GETRTIILILRYMKENRL 237
G+ + +L M E +
Sbjct: 779 GKLQEANHLLEEMIEKQF 796
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 175/465 (37%), Gaps = 94/465 (20%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D +TY +++ F KR K + M + G+ + +TY +++ GD++
Sbjct: 270 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A R+K+ EM+ G+ N + L+
Sbjct: 330 AF-----------------------------RIKD------EMVACGIEANLIIWNTLLN 354
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
+ +AGK E+ALEI +M E GV+PD ++LIE C+ +L MK+ +LA
Sbjct: 355 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 414
Query: 239 --LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
L Y V L + + N L V P +AV + T
Sbjct: 415 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP------NAVVYTT------------ 456
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ K+ + +L + ++ I D +++I C +R + A ++
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG--HSLGVYLG-------------AL 400
L Y A I K EM G ++G+Y A
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576
Query: 401 LIHRLGSARRPVP--------------------AAKIFSLLPEDQKCTATYT--ALIGVY 438
+ R +RR + A IFS L E +T +LI
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ DKA ++ + MC KGI+P + T+N+L+ GL K G + A+
Sbjct: 637 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 681
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 114/540 (21%), Positives = 202/540 (37%), Gaps = 84/540 (15%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
I W++ +N V K MEKA + +G D TY+ +++ G R +M
Sbjct: 347 IIWNTL-LNGVCKAGK-MEKALEIMQEM-MEKGVEPDSQTYSLLIE--GHC-RGQNMARA 400
Query: 89 FEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
FEL M+++ + +TY+ +++ L G++ G I EM + P V YT M
Sbjct: 401 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 460
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTY-----------------TVLMEYLVR----- 183
RV+E+ + + M ++G+ P+ + Y T LME L R
Sbjct: 461 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 520
Query: 184 -------------AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
AG+ E A F++M GV P+ LIE CK G + R
Sbjct: 521 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS-----------PEFISDNDAV 279
++ R+ + +QT+ V S ++H F P + N +
Sbjct: 581 FILSRRVL-------QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 633
Query: 280 -----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
E I + L+ L K + +L I + +
Sbjct: 634 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 693
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+ + +++ C + A E + + + Y ++ K F K ++
Sbjct: 694 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 753
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFS 440
+EM + G + V L+ S + A + + E Q TYT+LI
Sbjct: 754 FQEMLEKGFASTVSFNTLIEGYCKSGKLQ-EANHLLEEMIEKQFIPNHVTYTSLIDHNCK 812
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
AG +A +++ M + + P+ T+ LL G +G +S+ +E K I+ D ++
Sbjct: 813 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 872
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 23 LLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
LL+ +P D++ N +L EKA F + +GF ++ T+++ + ++
Sbjct: 723 LLRGVPP--DAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGF-ASTVSFNTLIEGYCKS 778
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
++ ++ E M EK + VTYTS++ AG + A +W EM+ + PT +Y
Sbjct: 779 GKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTY 838
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
T+ + + E + +++EM+ +G+ P+ TY V+++ R G EA ++ ++
Sbjct: 839 TSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILV 898
Query: 200 AGVQPDKAACNILIEKC 216
G+ P K+ + + C
Sbjct: 899 KGM-PMKSGFRLGLPTC 914
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 170/448 (37%), Gaps = 90/448 (20%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
++V + +M G + AVN++ K E P+++S + + L ++V+ V+
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 212
Query: 160 KEMIQRGLPPNCYTYT-----------------VLMEYLVRAGKYEEALEIFSKMQEAGV 202
M + P+ YTYT VL+E +A +EA+E+ M + G+
Sbjct: 213 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGL 272
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL-----------QTF 251
PD +ILI C +R L+L M + L P+ AL Q F
Sbjct: 273 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE-PITYNALIDGFMRQGDIEQAF 331
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
++ D E V IE L I L+ + K +
Sbjct: 332 RIKD------------------------EMVACGIEANLIIWNTLLNGVCKAGKMEKALE 367
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNC-------------DHRRRDGALLAFEYSVKMD--- 355
++ +M+K ++ DS S +IE +C + ++R A YSV ++
Sbjct: 368 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 427
Query: 356 --LNLERT-----------------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
NL+ T Y L+ K + I+E M + G V+
Sbjct: 428 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 487
Query: 397 LGALLIHRLGSARRPVPAAK-IFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTM 454
LI A+R A + +L + A TY A I Y AG + A + + M
Sbjct: 488 CYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 547
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G+ P++G + L+ G K G V++A
Sbjct: 548 LSCGVLPNVGIYTALIEGHCKEGNVTEA 575
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ F + TYT+++D +A + K ++ MQE+ + A TYTS++H N G++
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 853
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP---------PN 170
++EEM K P ++Y + V EA + E++ +G+P P
Sbjct: 854 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPT 913
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
C +V+ AG +EA E+ M + G
Sbjct: 914 C---SVIARGFQIAGNMDEAAEVLRSMVKFG 941
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 187/458 (40%), Gaps = 56/458 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FN + F +D TY+ ++D F + ++ + M E GI Y+
Sbjct: 371 LDEAESLFNNMGHKGLFPND-VTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ G + A ++++EM P +V YT+ + + A +Y EM +
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN YT+T L+ L A + EA ++F +M E V P++ N+LIE CK G T
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549
Query: 226 ILILRYMKENRLA----LRYPVFKEALQTFKVADE--------------NDSLLWQVHPQ 267
+L M E L P+ T +V++ N+ +
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHG 609
Query: 268 FSPEFISDN--DAV-EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+ E D+ DA E + + L L+ +L++++ +I LL + D+ ++ D
Sbjct: 610 YCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPD 669
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+ + +T+I+ N A ++ V Y ALI L K+ K +
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCR 729
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSA 444
EM + LP TY + S G+
Sbjct: 730 EMLASNS-----------------------------LPNQN----TYACFLDYLTSEGNI 756
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+KA++++ + +G + T+N+L+ G KLGR+ +A
Sbjct: 757 EKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEA 793
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 170/417 (40%), Gaps = 32/417 (7%)
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
++F+ + G+ D YT+V+ L D A + M+ C ++ +Y +++ L
Sbjct: 201 HLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGL 260
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
N RV EA ++ + +GL + TY L+ L + ++E E+ ++M E G P +
Sbjct: 261 CKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSE 320
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQ 263
AA + L++ K G + ++ +K+ +A V+ + + DE +SL
Sbjct: 321 AAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNN 380
Query: 264 V-HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ H P D+ + ID K+ L L + + I+
Sbjct: 381 MGHKGLFP-------------NDVTYSILIDS-----FCKRGKLDVALHFLGKMTEVGIK 422
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
S++I +C + A F+ + L Y +LI K +
Sbjct: 423 ATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIG 436
EMT G S Y LI L A R A K+F +++P + TY LI
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE----VTYNVLIE 538
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
+ G+ +A ++ M KG+ P T+ L++GL GRVS+A + + + Q
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 34/196 (17%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D YTTM+D +A + ++++M +G + VTYT++++ L G +D
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723
Query: 120 AVNIWEEMKLKECYPTIVSYTAYM----------KILFLND------------------- 150
A + EM P +Y ++ K + L+D
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRG 783
Query: 151 -----RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
R++EA +V MI G+ P+C +Y+ ++ R G +EA++++ M GV PD
Sbjct: 784 FCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPD 843
Query: 206 KAACNILIEKCCKAGE 221
A N LI CC GE
Sbjct: 844 TVAYNFLIYGCCVTGE 859
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 183/456 (40%), Gaps = 31/456 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY T++ + + + + + M E G ++++ L G++
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ ++K P++ Y A + + + ++ EA ++ M +GL PN TY++L++
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ GK + AL KM E G++ + LI CK G+ R + M N L
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN------------------DAVEF 281
++ + + E + ++++ + + + IS N +A +
Sbjct: 459 NVVIYTSLISGYCKEGELHN-AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517
Query: 282 VTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
+E + ++ +L+ K+ N V LL +++K + D+ +I C
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
R A L + AL+ K + EM G ++ +
Sbjct: 578 TGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVC 637
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPE--DQKC---TATYTALIGVYFSAGSADKALKIYK 452
++LI+ + R I LL + DQ YT +I AG+ A ++
Sbjct: 638 YSVLIYGI---LRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWD 694
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
M +G P++ T+ L+ GL K+G + AE+ +E
Sbjct: 695 IMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCRE 730
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 176/460 (38%), Gaps = 45/460 (9%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK--------------RISSMKYVFELMQE 94
A FFN++ + F+H ++ ++ ++ R + + +FE +
Sbjct: 76 ALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLD 135
Query: 95 KGINIDAVTYTS----VMHWLSNAGDVDGAVNIWEEMKLKEC--YPTIVSYTAYMKILFL 148
+ T + ++ N ++DG V + M +C P I + + + L
Sbjct: 136 SYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMM---DCGILPQIRTLSGVLNGLIR 192
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ + A ++ E++ GL P+ Y YT ++ L + A E+ +M+ +G A
Sbjct: 193 IRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVAT 252
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
N+ I CK + E + L Y + + T+ L +V +F
Sbjct: 253 YNVFIRGLCKNQRVWEAV-------EIKNLLSYKGLRADVGTYCTLVLG---LCKVE-EF 301
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
N+ +EF E +S LV L KK N+ + L++ + + V
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVS---NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVY 358
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ +I C + D A F L Y LI K + +MT+
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418
Query: 389 AGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGS 443
G VY + LI +LG R A +F + + + YT+LI Y G
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLR---AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
A ++Y M KGI P+ TF L++GL R+++A
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/468 (19%), Positives = 204/468 (43%), Gaps = 24/468 (5%)
Query: 22 DLLKNLPIKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D +K I+ D YT N ++ + +A F+ + ++ GF D+ T+ ++LD++G+
Sbjct: 245 DSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEM-KAAGFEPDKVTFNSLLDVYGK 303
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A+R V + M+ G VTY S++ G ++ A+ + +EM+ + P +V+
Sbjct: 304 ARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVT 363
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YT + L ++ A Y EM++ G PN TY L++ GK+ E + +F ++
Sbjct: 364 YTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLR 423
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
AG PD N L+ + G + + + MK+ + + ++ D
Sbjct: 424 SAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 483
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+ +++ + + I +S ++ L + V + L + + D
Sbjct: 484 QAM-EIYKR-------------MIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMED 529
Query: 319 KSIQLDSAVISTIIEVNCDHRRRD--GALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+ + D S+++ + ++ D AL Y+ +++ + L L+ K+N+
Sbjct: 530 RDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVN--NKVNSL 587
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTAL 434
+ + +E+ + SL + + ++ G + ++ +L+ E+ ATY +L
Sbjct: 588 SETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSL 647
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ +Y G +K I + G+ P ++N ++ + G++ +A
Sbjct: 648 MHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEA 695
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 167/410 (40%), Gaps = 66/410 (16%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF-LNDRVKEATDV 158
DA YT+++ S AG AV ++ M P +V+Y + + ++ KE +
Sbjct: 184 DASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVL 243
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
M + G+ + YTY L+ R G Y EA ++F +M+ AG +PDK N L++ K
Sbjct: 244 VDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGK 303
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
A I +L+ M EN +P ++ N
Sbjct: 304 ARRHEEAIGVLKKM-----------------------ENAGC--------TPSVVTYNSL 332
Query: 279 VEFVTTD--IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ D +E L + Q + + K ++V +L+SG +D+ ++D+
Sbjct: 333 ISAYVKDGLLEEALELKQEMEFRGM-KPDVVTYTTLISG-LDRIGKIDA----------- 379
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
AL + V+ + Y ALI + F ++ + +++ AG+ V
Sbjct: 380 -------ALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVV 432
Query: 397 LGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
L+ G + +F +PE TY +LI Y G D+A++I
Sbjct: 433 TWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERD----TYVSLISSYSRCGLFDQAMEI 488
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
YK M GI+P + T+N +L+ L + GR AE E + + D LS
Sbjct: 489 YKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELS 538
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
VN + + EKA+ R R + D M+ I+G+ K + ++ V LM+E
Sbjct: 580 VNNKVNSLSETEKAFQEL----RRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKEN 635
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
IN A TY S+MH S GD + I E+K P SY + ++KEA
Sbjct: 636 SINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEA 695
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ ++ EM G+ P+ TY + ++ V +EEA+++ + G +P++ N ++E
Sbjct: 696 SRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEG 755
Query: 216 CCKAG 220
C+ G
Sbjct: 756 YCRHG 760
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 87/160 (54%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F + Y +++ F ++ + + M EKGI+ + +TY++V+ LS G+V+ A+
Sbjct: 245 FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+W +M ++ C P + ++T+ MK F+ RV EA +++ M + G PN Y L+ L
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK EA+ + SKM+ G P+ + LI+ KAG+
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGD 404
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/492 (19%), Positives = 209/492 (42%), Gaps = 38/492 (7%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L+T + A +F ++ S+ F H + TY M++ G + ++Y+ + M+ +GI+
Sbjct: 53 LRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISC 112
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ +V++ G + A+ ++ ++ C PT+ Y + + +R + +Y
Sbjct: 113 SEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIY 172
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
M + G PN YTY +L++ L + + + A ++ +M G +PD + +I K
Sbjct: 173 SNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKL 232
Query: 220 G---ETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
G E R L +R+ + +++ + + +KV + L V P I+ +
Sbjct: 233 GKVEEARE--LSIRF--QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYS 288
Query: 277 DAVEFVT--TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG----------------IMD 318
+ ++ ++E L++ + + N+ SL+ G + +
Sbjct: 289 TVISSLSGIGNVELALAV-WAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAE 347
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN---LERTAYLALIGILIKLNT 375
+ + + +T+I C H + A+ S KM+ N + Y ALI K
Sbjct: 348 EGFEPNVVAYNTLIHGLCSHGKMGEAV---SVSSKMERNGCSPNVSTYGALIDGFAKAGD 404
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYT 432
+EI +M G V + +++ L + A + + D C T T+
Sbjct: 405 LVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN-CPPNTVTFN 463
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA--EIYRKEKK 490
I +G + A+ ++ M + G P++ T+N +L GL K R+ +A + E+K
Sbjct: 464 TFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEK 523
Query: 491 SIQADALSKDAV 502
++ + ++ + +
Sbjct: 524 GMELNLVTYNTI 535
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT+M+++ + S + E M + VT+ + + L +G V+ A+N++ +M+
Sbjct: 427 YTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQME 486
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P I +Y + L +R+KEA ++ EM ++G+ N TY + GK+E
Sbjct: 487 QYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFE 546
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
EAL++ KM GV+PD N L C G+ +T I +L
Sbjct: 547 EALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLL 587
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 171/454 (37%), Gaps = 81/454 (17%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +TY +L + R+ + M KG D V+YT+V+ +S G V+ A
Sbjct: 179 GKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA 238
Query: 121 ----------VNIWE--------EMKLKECY------------PTIVSYTAYMKILFLND 150
V+++ E K+KE + P +++Y+ + L
Sbjct: 239 RELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIG 298
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
V+ A V+ +M RG PN YT+T LM+ G+ EAL I+++M E G +P+ A N
Sbjct: 299 NVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYN 358
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE--NDSLLWQVHPQF 268
LI C G+ + + M+ N + + + F A + S +W
Sbjct: 359 TLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWN----- 413
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
+ +T + + +V +L + SL+ + + ++
Sbjct: 414 -----------KMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTF 462
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+T I+ C R + A+ F + + Y ++ L+K N + E+V EM +
Sbjct: 463 NTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEE 522
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKAL 448
G L + TY + G + + G ++AL
Sbjct: 523 KGMELNL---------------------------------VTYNTIFGGFCNVGKFEEAL 549
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
K+ M G+ P T+N L G+V A
Sbjct: 550 KLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTA 583
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +LD + RI + M+EKG+ ++ VTY ++ N G + A+ + +M
Sbjct: 496 TYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKM 555
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGK 186
+ P ++Y + +VK A + ++ G P YT L+ +
Sbjct: 556 LVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIG 615
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILI 213
EEA+ KM G+ + A N L+
Sbjct: 616 VEEAVLYLDKMLNEGICLNAATWNALV 642
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 176/427 (41%), Gaps = 27/427 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +L + A R+ + +F+ M D VTY ++H G+++ AV + ++M
Sbjct: 264 SYNILLKVLCGAGRVEDARQLFDEMASPP---DVVTYGILIHGYCALGELENAVKLLDDM 320
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P YT+ + +L RV +A V ++M+ + + YT ++ G
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDL 380
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
A F +MQ G+ D LI C+AGE + +L+ M RL + Y V
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVL 440
Query: 245 KEA-LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + K+A+ +QVH ++ N +D L K+
Sbjct: 441 VDGYCKRGKMAEA-----FQVHNTMVQRGVAPNVVTYTALSD-------------GLCKQ 482
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
++ A + LL + +K ++L++ +++I C D A+ L + Y
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI L K + ++++EM G + +L++ + R K+ + E
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE 602
Query: 424 D--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
TY +L+ Y + +IYK MC + + P+ T+N+L+ G K + +
Sbjct: 603 KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662
Query: 482 AEIYRKE 488
A+ + E
Sbjct: 663 AQYFHNE 669
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 23/346 (6%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A +F+ + R +G D TYTT+++ A + + V + M + +++D VTYT ++
Sbjct: 383 ARRWFDEMQR-KGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLV 441
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
G + A + M + P +V+YTA L V+ A ++ EM +GL
Sbjct: 442 DGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLE 501
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
N TY L+ L +AG ++A+ + M AG++PD LI+ CK+GE +
Sbjct: 502 LNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDL 561
Query: 229 LRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
L+ M +N + + + F +V L W + P + N
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN-------- 613
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
L+ N+ + + G+ ++++ + + +I+ +C R A
Sbjct: 614 ----------SLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEA 663
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
++ L ++Y ALI +L K F + ++ +M K G
Sbjct: 664 QYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 136/328 (41%), Gaps = 14/328 (4%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + YT+++ + + R+S V E M + +D YT+V+ N GD+
Sbjct: 322 ARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLV 381
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++EM+ K V+YT + L +KEA V +EM+ R L + TYTVL+
Sbjct: 382 SARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLV 441
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + GK EA ++ + M + GV P+ L + CK G+ + +L M L
Sbjct: 442 DGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLE 501
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
L + + A D + ++D DA ++ + L+
Sbjct: 502 LNACTYNSLINGLCKAGYLDQAMRT---------MADMDAA-----GLKPDVYTYTTLID 547
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L K L LL ++D I+ + ++ C R +G E+ ++ +++
Sbjct: 548 ALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHP 607
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEM 386
T Y +L+ N EI + M
Sbjct: 608 NATTYNSLMKQYCIGNNMKSTTEIYKGM 635
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 173/442 (39%), Gaps = 44/442 (9%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
P +++S + F+ D ++ +L A + +++ GI+
Sbjct: 186 PSPHRHFVEHYISTYKAFSSDPASFDLLLLCLPSAP-------LLRRVRQYGISPSPEAC 238
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+V+ L +D A+ +++ + K + SY +K+L RV++A ++ EM
Sbjct: 239 NAVLSRLP----LDEAIELFQGLPDK----NVCSYNILLKVLCGAGRVEDARQLFDEMAS 290
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
PP+ TY +L+ G+ E A+++ M GV+P+ ++ C G
Sbjct: 291 ---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSD 347
Query: 225 IILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+ ++ M +++ L V+ L F D + W + + ++ D V + T
Sbjct: 348 ALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRW--FDEMQRKGLA-TDGVTYTT 404
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
L+ L + L + +L ++ + + +D + +++ C +
Sbjct: 405 ------------LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAE 452
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A V+ + Y AL L K E++ EM+ G L LI+
Sbjct: 453 AFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 512
Query: 404 R------LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L A R + L P+ TYT LI +G D+A + + M
Sbjct: 513 GLCKAGYLDQAMRTMADMDAAGLKPD----VYTYTTLIDALCKSGELDRAHDLLQEMLDN 568
Query: 458 GIHPSLGTFNVLLAGLEKLGRV 479
GI P++ T+NVL+ G GRV
Sbjct: 569 GIKPTIVTYNVLMNGFCMSGRV 590
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +++ F + R+ K + E M EK I+ +A TY S+M ++ I++ M
Sbjct: 576 TYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGM 635
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +Y +K +KEA + EMI++G +Y+ L+ L + K+
Sbjct: 636 CSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKF 695
Query: 188 EEALEIFSKMQEAG--VQPD 205
EA ++F M++ G +PD
Sbjct: 696 VEARKLFHDMRKEGFTAEPD 715
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 88/157 (56%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++Y T++ F +A+++ + +YV M + G + + VT+ +++ L G +D A ++
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMF 273
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E M + C PT V+YT + R+ +A D + +M++RG+ PN YTYT L+ L A
Sbjct: 274 EYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDA 333
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
K E+ALEI +M G +P+ +I CK G+
Sbjct: 334 NKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQ 370
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 149/405 (36%), Gaps = 56/405 (13%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F W +R F H FTY L+ + S + +F+ M K + TY V+ L
Sbjct: 24 FKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLC 83
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC- 171
+ D A+ + ++M+ K PT + L N +V A ++YK L C
Sbjct: 84 DDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKR-----LSDECS 138
Query: 172 ---YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
+Y +L L +A + + AL +F +M+E V P N L+ C+AG + +
Sbjct: 139 LDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTL 198
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
L M E + K +D P+ S N T I G
Sbjct: 199 LEEMIEGK---------------KGSD------------VVPDMYSYN-------TVISG 224
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
K + L +L ++ + +T+++ C + D A F
Sbjct: 225 -----------FCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMF 273
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
EY V+ + Y LI + K + +M + G VY LI L A
Sbjct: 274 EYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDA 333
Query: 409 RRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
+ A +I + + TYT +IG G ++A K++
Sbjct: 334 NKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLF 378
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + T+ T+LD ++ +FE M E+ AVTYT ++ + A +D A
Sbjct: 245 GCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKA 304
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +M + P + +YTA + L ++V++A ++ K M G PN TYT ++
Sbjct: 305 NDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGA 364
Query: 181 LVRAGKYEEALEIFSKM---QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L + G+ E A ++F+ + A +PD A + +I C+ + M E++L
Sbjct: 365 LCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKL 424
Query: 238 ALRYPVFKEALQTFKVADENDSL 260
+ ++K ++ E + +
Sbjct: 425 VAKPHIYKAMADGLELVQETEKV 447
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 149/387 (38%), Gaps = 57/387 (14%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP-TIVSYTAYMKILFLNDRVKEATDVYKE 161
T V+H L N A +++ +E + T+ +Y AY+ L +A ++ +
Sbjct: 3 TEDDVIHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDD 62
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M+ + PN YTY +++ L K + ALE+ M+ + P N+L+ CK G+
Sbjct: 63 MLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGK 122
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
++++ + S E D +
Sbjct: 123 VDAA------------------------------------YELYKRLSDECSLDRISYNM 146
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+T + ID+ L + ++N V + SLL+ + ++ C R
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEENAV-VPSLLT-------------YNGLLYGYCRAGRM 192
Query: 342 DGALLAFEYSVK----MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+ A+ E ++ D+ + +Y +I K P ++ M K+G S V
Sbjct: 193 EQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVT 252
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMC 455
L+ L + A +F + E + TYT LI + A DKA + M
Sbjct: 253 FNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDML 312
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA 482
R+G+ P++ T+ L+ GL +V DA
Sbjct: 313 RRGVEPNVYTYTALIGGLCDANKVEDA 339
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 32/141 (22%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + +TYT ++ +A ++ + + M G + VTYT V+ L G ++
Sbjct: 314 RGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIER 373
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ + + S TA K P+ Y Y+ ++
Sbjct: 374 ATKLFND--------AMGSRTAKCK------------------------PDSYAYSTIIY 401
Query: 180 YLVRAGKYEEALEIFSKMQEA 200
+L R K+ EA E F +M E+
Sbjct: 402 WLCRQSKFLEAYEYFLRMVES 422
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 177/410 (43%), Gaps = 36/410 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+GF D TY ++L F + +K + E M + G D +TY +++H G D
Sbjct: 332 SKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHD 391
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ +MKL P V+YT + L + +KEA +V EM+ + P T++ L+
Sbjct: 392 LAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALI 451
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+AGK EA E F M +G++PD A +++++ ++LR+ + +
Sbjct: 452 CGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLD------------ILLRFNESGKAM 499
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y + L +FK D L++V + + + D V V D+E ++ ++
Sbjct: 500 KLYQ--EMVLHSFK----PDHALYEVMLRVLGKENREED-VHKVVKDMEELCGMNSQVIC 552
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA-----FEYSVK 353
+L K D + + IS E++ + RD L FE +
Sbjct: 553 SILVKGE----------CFDHAANMLRLAISQGCELDQYGKARDFGLFCGTEELFEGLLS 602
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ L+R+ Y ++ + K +++ M +AG + LL+ + +P
Sbjct: 603 KECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEE 662
Query: 414 AAKIFSLLPEDQKCTAT--YTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
A K+ L + +T Y+++I Y G + A++ M + G+ P
Sbjct: 663 AEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEP 712
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/496 (20%), Positives = 197/496 (39%), Gaps = 62/496 (12%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYV----FELMQE---KGINIDAVTYTSVMHW 110
RSRG D ++ T+++ R+ S V EL+ E GI D +TY +++
Sbjct: 224 RSRGCEPDLVSFNTLIN-----ARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISA 278
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
S +++ AV ++ +M C P + +Y A + + +EA ++K++ +G P+
Sbjct: 279 CSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPD 338
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TY L+ R G ++ EI M + G D+ N +I K G+ +
Sbjct: 339 AVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYS 398
Query: 231 YMK---ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
MK + A+ Y V ++L + E + E +S E + ++
Sbjct: 399 DMKLSGRSPDAVTYTVLIDSLGKANMIKE------------AAEVMS-----EMLNARVK 441
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
L L+ K V + ++ I+ D S ++++ A+
Sbjct: 442 PTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKL 501
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK-AGHSLGVYLGALL----- 401
++ V + Y ++ +L K N V ++V++M + G + V L+
Sbjct: 502 YQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECF 561
Query: 402 ----------------IHRLGSARR---PVPAAKIF-SLLPEDQKCTAT-YTALIGVYFS 440
+ + G AR ++F LL ++ K + Y ++ ++ +
Sbjct: 562 DHAANMLRLAISQGCELDQYGKARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMFRN 621
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKD 500
+G+ KA K+ M G+ P++ T ++L+ G+ +AE K +++ + L
Sbjct: 622 SGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAE---KVLDNLKVEGLPLS 678
Query: 501 AVPMEEKICDLLYGGD 516
+P I L GD
Sbjct: 679 TLPYSSVIDAYLKNGD 694
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 83/430 (19%), Positives = 166/430 (38%), Gaps = 36/430 (8%)
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY-PTIVSYT 140
+ S ++V +++ ++ + + + V+ W+ + A+ ++E + L+ Y P
Sbjct: 109 LKSEEFVADVLDDRKVQMTPTDFCFVVKWVGQSS-WQRALEVYEWLNLRHWYSPNARMLA 167
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ +L ++ A +++ + Y +M R G++ + E+ M+
Sbjct: 168 TILSVLGKANQEALAVEIFAR-AEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSR 226
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA----------------LRYPVF 244
G +PD + N LI K+G T L + + E R + R
Sbjct: 227 GCEPDLVSFNTLINARLKSG-TMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNL 285
Query: 245 KEALQTFK--VADENDSLLWQVHPQFSPE---FISDNDAVEFVTTDIEG--PLSID-QGL 296
+EA++ + VA LW + S +S F + +G P ++ L
Sbjct: 286 EEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSL 345
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ ++ N+ + + ++ D +TII + + +R LAF+ M L
Sbjct: 346 LYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHM---YGKRGQHDLAFQLYSDMKL 402
Query: 357 ---NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ + Y LI L K N + AE++ EM A + + LI A + V
Sbjct: 403 SGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVE 462
Query: 414 AAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
A + F + + Y+ ++ + + KA+K+Y+ M P + V+L
Sbjct: 463 AEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLR 522
Query: 472 GLEKLGRVSD 481
L K R D
Sbjct: 523 VLGKENREED 532
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 73 LDIFGEAKRIS---SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
LD +G+A+ + +FE + K +D Y +M N+G+ A + MK
Sbjct: 578 LDQYGKARDFGLFCGTEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKE 637
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
PTI + M + + +EA V + GLP + Y+ +++ ++ G +
Sbjct: 638 AGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNV 697
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A++ +M++ G++PD + + T I++L+ +++ L + E +
Sbjct: 698 AIQKLMEMKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGFDLPIRLLTE--K 755
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+ + E D+ L ++ P + DN A FV
Sbjct: 756 SDSLVSEVDNCLEKLGP------LEDNAAFNFVN 783
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 201/484 (41%), Gaps = 44/484 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ A F + + R G + +TY ++ R+ V M+ G +AVTY
Sbjct: 133 LPSARRFLSSMLR-HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYN 191
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+++ AG++DGA + M+ + P +V++ + + L R++ A V+ EM++
Sbjct: 192 TLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
GL P+ +Y L+ + G E+L +FS+M + G+ PD LI CKAG
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ----FSPEFISDNDAVE 280
+ ++ M+E L + F + F D L V P + N +
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371
Query: 281 FVTTDIEGPLSIDQGLVLILLKKK---NLVAIDSLLSGI-----MDKSIQL--------- 323
G + + + L+ + K+ ++V +++SG +D + QL
Sbjct: 372 GYCK--LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429
Query: 324 --DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
D+ S++I C+ +R + A FE +++ + + Y LI K K
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK-IFSLLPED-----------QKCTA 429
+ +EM + G V ++LI+ L + R A + +F L ED C +
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549
Query: 430 -----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ AL+ + G +A K+Y++M + +++L+ G + G V A
Sbjct: 550 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 609
Query: 485 YRKE 488
+ K+
Sbjct: 610 FHKQ 613
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 168/420 (40%), Gaps = 55/420 (13%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
Y +V+ LS+A + A M P + +Y ++ L R++EA V +M
Sbjct: 120 AYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM 178
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKAGE 221
G PN TY L+ RAG+ + A + S M+E G +P+ N ++ CKAG
Sbjct: 179 RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGR 238
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVE 280
+ M LA + L + KV ++SL V + + + D V
Sbjct: 239 MEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESL--AVFSEMTQRGLVP-DVVT 295
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
F + L+ K NL +L++ + ++ ++++ + +I+ C
Sbjct: 296 FTS------------LIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM-------------- 386
D ALLA E K + Y ALI KL E++ EM
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 387 -----TKAGH------------SLGVYLGAL----LIHRLGSARRPVPAAKIFSLLPE-- 423
K G+ GV A+ LI L +R A ++F + +
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Q TYT LI + G+ +KAL ++ M RKG+ P + T++VL+ GL K R +A
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 98/251 (39%), Gaps = 55/251 (21%)
Query: 13 KYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEK--AWLFFNWVSRSRGFNHDRF 67
K D A++L++ + +K D T + ++ + + + N +G D
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY++++ E KR++ +FE M + G+ D TYT+++ G+V+ A+++ +EM
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 128 KLKECYPTIVSYT----------------------------------------------- 140
K P +V+Y+
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554
Query: 141 ---AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
A +K + +KEA VY+ M+ R + Y++L+ R G +AL +M
Sbjct: 555 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 614
Query: 198 QEAGVQPDKAA 208
+G P+ +
Sbjct: 615 LRSGFSPNSTS 625
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 127/337 (37%), Gaps = 53/337 (15%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ Y ++ L A A S M GV P+ NIL+ C G
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ ++ M+ A + + F A E D E V +
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD-------------------GAERVVS- 211
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
L ++G K NLV +S+++G+ C R +GA
Sbjct: 212 ----LMREEGNA-----KPNLVTFNSMVNGL-------------------CKAGRMEGAR 243
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ V+ L + +Y L+ K+ + + EMT+ G V LIH
Sbjct: 244 KVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303
Query: 406 GSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A A + + + E + T+TALI + G D AL + M + GI PS+
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363
Query: 464 GTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQADALS 498
+N L+ G KLGR+ A E+ R+ E K ++ D ++
Sbjct: 364 VCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 196/448 (43%), Gaps = 38/448 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI-------DAVTYTSVMHW 110
++RG + T+ +L + + F E+ + D+VTYT+++
Sbjct: 56 KARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDG 115
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L AG+ D + +E+M +C PT+++YT + L +V+ A DV++EMI++G P+
Sbjct: 116 LFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPD 175
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
Y+ L++ L +AG+ +EA ++ M G P A ++ CK G + + ++
Sbjct: 176 IIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 235
Query: 231 YMKE----------NRLALRYPVFKEALQTFKVADE-------NDSLLWQVHPQFSPEFI 273
M+ + + Y + + F V +E D++ + + +
Sbjct: 236 EMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIG 295
Query: 274 SDNDAVEFVTTDIEGPLSIDQ---GLVLILLKKKNLVAIDSLLSGIMDK-SIQLDSAVIS 329
+A + T +E D G+++ K+ +A + + +MDK +++ + + +
Sbjct: 296 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 355
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
I++ R + AL ++ +K + Y +I L KL + E++ EM +
Sbjct: 356 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 415
Query: 390 GHSL--GVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTA---TYTALIGVYFSAG 442
L + +++IH LG + F LL E D TYT+LI AG
Sbjct: 416 KEELEPSIVTYSMIIHGLGKVGME---ERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAG 472
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLL 470
+A+++ + M + GI P T+ L+
Sbjct: 473 KVSRAMELLEEMLKAGIFPDDHTYGTLV 500
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 4/202 (1%)
Query: 33 SYTV--NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
+YTV + + K H +E+A F + R +G D Y++++D +A R+ + + +
Sbjct: 143 TYTVLVDGLCKAHK-VERACDVFEEMIR-KGHKPDIIAYSSLIDGLSKAGRVDEARKLVD 200
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
LM +G AV YTS++ L G + AV +EM+ + P + +Y+ +
Sbjct: 201 LMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMG 260
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+V+EA V +EM R P+ +YT+ +E L G+ EEA ++F M E G +PD
Sbjct: 261 KVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYG 320
Query: 211 ILIEKCCKAGETRTIILILRYM 232
I+I+ CK G +LR M
Sbjct: 321 IIIDNFCKEGSMAAATHVLRLM 342
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+R+ YT ++D F ++ R+ +++ + + GI VTY +V++ L +D A+ +
Sbjct: 350 NRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELL 409
Query: 125 EEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
EM+ + E P+IV+Y+ + L + A D+ EMI G+ P+C+TYT L++ L
Sbjct: 410 REMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLA 469
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
AGK A+E+ +M +AG+ PD L++ C++
Sbjct: 470 GAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 506
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 164/400 (41%), Gaps = 31/400 (7%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY-------PTIVSYTAYMK 144
M+ +GI + T+ ++ L D+D AV+ + + C P V+YTA +
Sbjct: 55 MKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVD 114
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
LF + Y++M+ P TYTVL++ L +A K E A ++F +M G +P
Sbjct: 115 GLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKP 174
Query: 205 DKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
D A + LI+ KAG E R ++ ++ A+ Y L E +
Sbjct: 175 DIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTI 234
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
++ + + D F+ T G +++ +++ + D+
Sbjct: 235 QEMRRRRLRPRV---DTYSFIVTGYIGMGKVEEAF--------------AVMEEMADRDC 277
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
D+ + IE RR+ A FE V+ + Y +I K +
Sbjct: 278 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 337
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYF 439
++ M KA Y+ +++ + R A +++ + +D T TY +I
Sbjct: 338 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 397
Query: 440 SAGSADKALKIYKTMCRKG--IHPSLGTFNVLLAGLEKLG 477
D+AL++ + M R+ + PS+ T+++++ GL K+G
Sbjct: 398 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVG 437
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 21 QDLLKN--LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG-FNHDRFTYTTMLDIFG 77
Q +LK+ LP TV L M++A + R + TY+ ++ G
Sbjct: 375 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 434
Query: 78 EAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
++ + F+L+ E G+ D TYTS++ L+ AG V A+ + EEM +P
Sbjct: 435 ---KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFP 491
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
+Y ++IL +D V A D+ +EM++ G PN +T+
Sbjct: 492 DDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTF 530
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 374 NTFPKVAEIVEEM-----TKAGHSLGVYLGALLIHR-LGSA-----RRPVPAAKIFSLLP 422
+ F V ++ EM T G + GV L AL R L A R A ++F +
Sbjct: 43 DDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIE 102
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ TYTA++ F AG+ D L+ Y+ M P+L T+ VL+ GL K +V A
Sbjct: 103 APD--SVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERA 160
Query: 483 -----EIYRKEKK------SIQADALSKDA-VPMEEKICDLL 512
E+ RK K S D LSK V K+ DL+
Sbjct: 161 CDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLM 202
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR-LGSARRPVPAAKIFSL 420
AY +++ L K + + ++EM + V + ++ +G + + F++
Sbjct: 213 AYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK----VEEAFAV 268
Query: 421 LPE--DQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ E D+ C T +YT I +S G ++A K+++TM KG P + T+ +++ K
Sbjct: 269 MEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCK 328
Query: 476 LGRVSDA 482
G ++ A
Sbjct: 329 EGSMAAA 335
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 88/157 (56%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++Y T++ F +A+++ + +YV M + G + + VT+ +++ L G +D A ++
Sbjct: 214 DMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMF 273
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E M + C PT V+YT + R+ +A D + +M++RG+ PN YTYT L+ L A
Sbjct: 274 EYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDA 333
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
K E+ALEI +M G +P+ +I CK G+
Sbjct: 334 NKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQ 370
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 149/405 (36%), Gaps = 56/405 (13%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F W +R F H FTY L+ + S + +F+ M K + TY V+ L
Sbjct: 24 FKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLC 83
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC- 171
+ D A+ + ++M+ K PT + L N +V A ++YK L C
Sbjct: 84 DDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKR-----LSDECS 138
Query: 172 ---YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
+Y +L L +A + + AL +F +M+E V P N L+ C+AG + +
Sbjct: 139 LDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTL 198
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
L M E + K +D P+ S N T I G
Sbjct: 199 LEEMIEGK---------------KGSD------------VVPDMYSYN-------TVISG 224
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
K + L +L ++ + +T+++ C + D A F
Sbjct: 225 -----------FCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMF 273
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
EY V+ + Y LI + K + +M + G VY LI L A
Sbjct: 274 EYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDA 333
Query: 409 RRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAGSADKALKIY 451
+ A +I + + TYT +IG G ++A K++
Sbjct: 334 NKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLF 378
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + T+ T+LD ++ +FE M E+ AVTYT ++ + A +D A
Sbjct: 245 GCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKA 304
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +M + P + +YTA + L ++V++A ++ K M G PN TYT ++
Sbjct: 305 NDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGA 364
Query: 181 LVRAGKYEEALEIFSKM---QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L + G+ E A ++F+ + A +PD A + ++ C+ + M E++L
Sbjct: 365 LCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKL 424
Query: 238 ALRYPVFKEALQTFKVADENDSL 260
+ ++K ++ E + +
Sbjct: 425 VAKPHIYKAMADGLELVQETEKV 447
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 149/387 (38%), Gaps = 57/387 (14%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP-TIVSYTAYMKILFLNDRVKEATDVYKE 161
T V+H L N A +++ +E + T+ +Y AY+ L +A ++ +
Sbjct: 3 TEDDVIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDD 62
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M+ + PN YTY +++ L K + ALE+ M+ + P N+L+ CK G+
Sbjct: 63 MLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGK 122
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
++++ + S E D +
Sbjct: 123 VDAA------------------------------------YELYKRLSDECSLDRISYNM 146
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+T + ID+ L + ++N V + SLL+ + ++ C R
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEENAV-VPSLLT-------------YNGLLYGYCRAGRM 192
Query: 342 DGALLAFEYSVK----MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+ A+ E ++ D+ + +Y +I K P ++ M K+G S V
Sbjct: 193 EQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVT 252
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMC 455
L+ L + A +F + E + TYT LI + A DKA + M
Sbjct: 253 FNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDML 312
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA 482
R+G+ P++ T+ L+ GL +V DA
Sbjct: 313 RRGVEPNVYTYTALIGGLCDANKVEDA 339
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 32/141 (22%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + +TYT ++ +A ++ + + M G + VTYT V+ L G ++
Sbjct: 314 RGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIER 373
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ + + S TA K P+ Y Y+ ++
Sbjct: 374 ATKLFND--------AMGSRTAKCK------------------------PDSYAYSTIVY 401
Query: 180 YLVRAGKYEEALEIFSKMQEA 200
+L R K+ EA E F +M E+
Sbjct: 402 WLCRQSKFLEAYEYFLRMVES 422
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 170/416 (40%), Gaps = 24/416 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + T+L+ +A ++ + + M EKG+ D+ TY+ ++ ++ A
Sbjct: 350 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 409
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +EMK ++ PT+++Y+ + L ++ + +EM+ GL PN YT LM
Sbjct: 410 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 469
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+ EE+ I +M+E G+ PD N LI CKA L M E RL
Sbjct: 470 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 529
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + + A E + I+D E ++ + + I L+
Sbjct: 530 AHTYGAFIDGYSKAGEME--------------IADRYFNEMLSCGVLPNVGIYTALIEGH 575
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K+ N+ S+ I+ + + D S +I + + A F + L
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 635
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-- 418
Y +LI K K ++++EEM G + + +LI L A A +F
Sbjct: 636 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 695
Query: 419 ----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
L P TY A++ Y + + A ++ + M +G+ P +NV+L
Sbjct: 696 IEGRGLTPN----CVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 186/438 (42%), Gaps = 39/438 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D F Y +++ F +AKR+ + M E+ + +A TY + + S AG++
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + EM P + YTA ++ V EA V++ ++ R + + TY+VL
Sbjct: 547 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 606
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM---KE 234
+ L R GK EA IFS++QE G+ P+ N LI CK G +L M
Sbjct: 607 IHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGI 666
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSID 293
N + Y + + L + +L + + +P ++ V+
Sbjct: 667 NPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC---------- 716
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
K KN A LL ++ + + D+ + + I+ C + + AL F+ ++
Sbjct: 717 --------KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 768
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK----AGHSLGVYLGALLIHR----- 404
++ LI K + ++EEM + H V +L+ H
Sbjct: 769 KGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH---VTYTSLIDHNCKAGM 824
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
+G A+R + +++P + TYT+L+ Y + G+ + +++ M KGI P
Sbjct: 825 MGEAKRLWLEMQERNVMPTAK----TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKM 880
Query: 465 TFNVLLAGLEKLGRVSDA 482
T+ V++ + G V +A
Sbjct: 881 TYYVMIDAYCREGNVMEA 898
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 163/369 (44%), Gaps = 23/369 (6%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A+ F ++ SR D TY+ ++ ++ +F +QEKG+ +A TY S+
Sbjct: 583 EAFSVFRFI-LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSL 641
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ G+VD A + EEM +K P IV+Y + L ++ A +++ ++ RGL
Sbjct: 642 ISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGL 701
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
PNC TY +++ ++ A ++ +M GV PD N+++ CCK + +
Sbjct: 702 TPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761
Query: 228 ILRYMKENRLA--LRYPVFKEA-LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF-VT 283
+ + M E A + + E ++ K+ + N L + QF P ++ ++
Sbjct: 762 LFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821
Query: 284 TDIEGP-----LSIDQGLVLILLKK-----------KNLVAIDSLLSGIMDKSIQLDSAV 327
+ G L + + V+ K N+ + +L ++ K I+ D
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 881
Query: 328 ISTIIEVNC-DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+I+ C + + L E VK + + AY ALI L K F +V +++ E+
Sbjct: 882 YYVMIDAYCREGNVMEACKLKDEILVK-GMPMSVAAYDALIQALCKKEEFFEVLKLLNEI 940
Query: 387 TKAGHSLGV 395
++G LG+
Sbjct: 941 GESGFRLGL 949
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 182/495 (36%), Gaps = 94/495 (18%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +TYT M+ + + K V M EKG + + VTY ++ L A +D A+ +
Sbjct: 214 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELK 273
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR- 183
M K P + +Y + + R +EA + EMI GL P TY L++ +R
Sbjct: 274 RSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQ 333
Query: 184 ----------------------------------AGKYEEALEIFSKMQEAGVQPDKAAC 209
AGK E+ALEI +M E GV+PD
Sbjct: 334 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY 393
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL-QTFKVADENDSLLWQVH 265
++LIE C+ +L MK+ +LA L Y V L + + N L V
Sbjct: 394 SLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVM 453
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
P +AV + T L+ K+ + +L + ++ I D
Sbjct: 454 NGLKP------NAVVYTT------------LMTAHAKEGRVEESRMILERMREQGILPDV 495
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+++I C +R + A ++ L Y A I K E
Sbjct: 496 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 555
Query: 386 MTKAG--HSLGVYLG-------------ALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
M G ++G+Y A + R +RR + + +S+L
Sbjct: 556 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 615
Query: 431 YTALIGVY----------------------FSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
G++ G+ DKA ++ + MC KGI+P + T+N+
Sbjct: 616 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675
Query: 469 LLAGLEKLGRVSDAE 483
L+ GL K G + A+
Sbjct: 676 LIDGLCKAGEIERAK 690
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 115/239 (48%), Gaps = 7/239 (2%)
Query: 23 LLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
LL+ +P D++ N +L EKA F + +GF ++ T+++ + ++
Sbjct: 732 LLRGVPP--DAFIYNVILNFCCKEEKFEKALDLFQEM-LEKGF-ASTVSFNTLIEGYCKS 787
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
++ ++ E M EK + VTYTS++ AG + A +W EM+ + PT +Y
Sbjct: 788 GKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTY 847
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
T+ + + E + +++EM+ +G+ P+ TY V+++ R G EA ++ ++
Sbjct: 848 TSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILV 907
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
G+ AA + LI+ CK E ++ +L + E+ L P + F++A D
Sbjct: 908 KGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMD 966
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 114/540 (21%), Positives = 202/540 (37%), Gaps = 84/540 (15%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
I W++ +N V K MEKA + +G D TY+ +++ G R +M
Sbjct: 356 IIWNTL-LNGVCKAGK-MEKALEIMQEM-MEKGVEPDSQTYSLLIE--GHC-RGQNMARA 409
Query: 89 FEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
FEL M+++ + +TY+ +++ L G++ G I EM + P V YT M
Sbjct: 410 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 469
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTY-----------------TVLMEYLVR----- 183
RV+E+ + + M ++G+ P+ + Y T LME L R
Sbjct: 470 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 529
Query: 184 -------------AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
AG+ E A F++M GV P+ LIE CK G + R
Sbjct: 530 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 589
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS-----------PEFISDNDAV 279
++ R+ + +QT+ V S ++H F P + N +
Sbjct: 590 FILSRRVL-------QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLI 642
Query: 280 -----------------EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
E I + L+ L K + +L I + +
Sbjct: 643 SGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 702
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+ + +++ C + A E + + + Y ++ K F K ++
Sbjct: 703 PNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDL 762
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFS 440
+EM + G + V L+ S + A + + E Q TYT+LI
Sbjct: 763 FQEMLEKGFASTVSFNTLIEGYCKSGKLQ-EANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
AG +A +++ M + + P+ T+ LL G +G +S+ +E K I+ D ++
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 881
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 164/432 (37%), Gaps = 86/432 (19%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF+ M + D TYT+++ G+V A + EM K C P +V+Y + L
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ EA ++ + M+ +GL P+ YTY +L+ + EA + +M + G++P+
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
N LI+ + G+ Q F++ D
Sbjct: 322 TYNALIDGFMRQGDIE-------------------------QAFRIKD------------ 344
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
E V IE L I L+ + K + ++ +M+K ++ DS
Sbjct: 345 ------------EMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQT 392
Query: 328 ISTIIEVNC-------------DHRRRDGALLAFEYSVKMD-----LNLERT-------- 361
S +IE +C + ++R A YSV ++ NL+ T
Sbjct: 393 YSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV 452
Query: 362 ---------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
Y L+ K + I+E M + G V+ LI A+R
Sbjct: 453 MNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME 512
Query: 413 PAAK-IFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A + +L + A TY A I Y AG + A + + M G+ P++G + L+
Sbjct: 513 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 572
Query: 471 AGLEKLGRVSDA 482
G K G V++A
Sbjct: 573 EGHCKEGNVTEA 584
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ F + TYT+++D +A + K ++ MQE+ + A TYTS++H N G++
Sbjct: 803 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 862
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
++EEM K P ++Y + V EA + E++ +G+P + Y L++
Sbjct: 863 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQ 922
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L + ++ E L++ +++ E+G + C+++ AG +LR M
Sbjct: 923 ALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT++L + +S + +FE M KGI D +TY ++ G+V A + +E+
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 905
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+K ++ +Y A ++ L + E + E+ + G T +V+ AG
Sbjct: 906 LVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNM 965
Query: 188 EEALEIFSKMQEAG 201
+EA E+ M + G
Sbjct: 966 DEAAEVLRSMVKFG 979
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 126/329 (38%), Gaps = 30/329 (9%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN + +LM+ + G EA+ +F + +P +CN L+ K + +
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 229 LRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
M +++ + + V D LL SP ++ N
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYN-------- 254
Query: 285 DIEGPLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC-DHRRR 341
V+I L + + L L ++DK + D +I C + R R
Sbjct: 255 ------------VIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSR 302
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
+ L+ E + + L E Y ALI ++ + I +EM G + + L
Sbjct: 303 EAKLMLLEM-IDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTL 361
Query: 402 IHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
++ + A + A +I + E + + TY+ LI + + +A ++ M ++ +
Sbjct: 362 LNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 421
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
P++ T++V++ GL + G + +E
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILRE 450
>gi|255661012|gb|ACU25675.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 376
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ +G D F Y+ M++ + ++ V M + G +A Y ++++ L A
Sbjct: 119 IAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGAS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ AV + EM C PT+V+Y+ + L +R EA D+ KEM+Z+GL P+ TY+
Sbjct: 179 KFEDAVRVVREMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L K E AL++ +++ G +PD NILI C G+T+ +L+ M
Sbjct: 239 LLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQLALLLYLDMNRW 298
Query: 236 RLALRYPVFKEALQTFKVADE--NDSLLWQ--VHPQFSPEFISDN 276
A ++ F D+ N ++W + P+ IS N
Sbjct: 299 NCAPNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDIISYN 343
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W R + ++ M+ + ++ + + ELM++ G D++TY ++H
Sbjct: 48 WEMMGREGSRSVASFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKN 107
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G ++ ++++ E + K +Y+A + L ++ +A V MI+ G PN + Y
Sbjct: 108 GYINKSLHVLEIAERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVY 167
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
L+ LV A K+E+A+ + +M P + LI CK
Sbjct: 168 NALINGLVGASKFEDAVRVVREMGTTNCSPTLVTYSTLINGLCK 211
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 163/429 (37%), Gaps = 61/429 (14%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V++ + E ++ DAV Y ++++ G + +WE M +E ++
Sbjct: 2 ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGFFRVGRIKDCFELWEMMG-REGSRSVA 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF N +V E + + M + G + TY +L+ + G ++L +
Sbjct: 61 SFNIMMRGLFDNGKVDEVISILELMKKSGFIEDSITYGILVHGFCKNGYINKSLHVLEIA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
+ G D A + +I CK + + +L M ++ V+ + A +
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNALINGLVGASKF 180
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
+ + V E TT+ L L+ L K + L+ ++
Sbjct: 181 EDAVRVVR--------------EMGTTNCSPTLVTYSTLINGLCKVERFGEAYDLVKEML 226
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+K + S +++ C + V+M L L
Sbjct: 227 ZKGLNPSVITYSLLMKGLC-----------LGHKVEMALQLX------------------ 257
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTAL 434
++T G V + +LIH L S + A ++ L C T+ L
Sbjct: 258 ------NQVTSKGFKPDVQMHNILIHGLCSVGKTQLALLLY-LDMNRWNCAPNLVTHNTL 310
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
+ ++ AL I+ + R G+ P + ++N+ L GL R+SDA ++
Sbjct: 311 MEGFYKDDDIRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDAILFLH------- 363
Query: 495 DALSKDAVP 503
DA++K VP
Sbjct: 364 DAVTKKIVP 372
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+T+++ + +R + + M ZKG+N +TY+ +M L V+ A+ + ++
Sbjct: 201 TYSTLINGLCKVERFGEAYDLVKEMLZKGLNPSVITYSLLMKGLCLGHKVEMALQLXNQV 260
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + + + L + + A +Y +M + PN T+ LME +
Sbjct: 261 TSKGFKPDVQMHNILIHGLCSVGKTQLALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDDI 320
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
AL I++++ G+QPD + NI ++ C IL L
Sbjct: 321 RNALVIWARILRNGLQPDIISYNITLKGLCSCNRISDAILFLH 363
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/132 (18%), Positives = 61/132 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N TY+ ++ ++ + + KG D + ++H L + G
Sbjct: 228 KGLNPSVITYSLLMKGLCLGHKVEMALQLXNQVTSKGFKPDVQMHNILIHGLCSVGKTQL 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ +M C P +V++ M+ + +D ++ A ++ +++ GL P+ +Y + ++
Sbjct: 288 ALLLYLDMNRWNCAPNLVTHNTLMEGFYKDDDIRNALVIWARILRNGLQPDIISYNITLK 347
Query: 180 YLVRAGKYEEAL 191
L + +A+
Sbjct: 348 GLCSCNRISDAI 359
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 137/342 (40%), Gaps = 22/342 (6%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F + SR D TYT ++ F + + +F M +G+ D +T+T +M+
Sbjct: 796 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYC 855
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG + A + M C P +V+YT + L + A ++ EM + GL PN +
Sbjct: 856 KAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 915
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY ++ L ++G EEA+++ + + AG+ D L++ CK+GE IL M
Sbjct: 916 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975
Query: 233 KENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
L F + F + D L W + +P + N
Sbjct: 976 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN------------ 1023
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
LV + NL A ++ + + ++ D +++ +C+ R A F
Sbjct: 1024 ------CLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLF 1077
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ ++ + Y LI K F + EI ++M + G
Sbjct: 1078 QEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDG 1119
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 155/398 (38%), Gaps = 51/398 (12%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF E G+ + +Y V+H++ G ++ A ++ M+LK P ++SY+ +
Sbjct: 656 VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ + + ++M Q+GL PN YTY ++ L R K EA E FS+M G+ PD
Sbjct: 716 RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
L++ CK G+ R +++H +
Sbjct: 776 VYTTLVDGFCKRGDIRAA--------------------------------SKFFYEMHSR 803
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+T D+ +I G I ++V L ++ + ++ D
Sbjct: 804 -------------DITPDVLTYTAIISGFCQI----GDMVEAGKLFHEMLCRGLEPDIIT 846
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ ++ C A + ++ + Y LI L K E++ EM
Sbjct: 847 FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
K G ++ +++ L + A K+ T TYT L+ Y +G D
Sbjct: 907 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 966
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
KA +I M KG+ P++ TFNVL+ G G + D E
Sbjct: 967 KAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1004
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 167/413 (40%), Gaps = 28/413 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y ++ + RI+ ++ LM+ KG D ++Y++V++ G++D + E+M
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K P +Y + + +L ++ EA + + EMI +G+ P+ YT L++ + G
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
A + F +M + PD +I C+ G+ + M L F E
Sbjct: 791 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL 850
Query: 248 LQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ + K D+ ++VH S N V TT I+G L K+ +L
Sbjct: 851 MNGYCKAGHIKDA--FRVHNHMIQAGCSPN--VVTYTTLIDG-----------LCKEGDL 895
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL-LAFEYSVKMDLNLERTAYLA 365
+ + LL + +Q + ++I+ C + A+ L E+ LN + Y
Sbjct: 896 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTT 954
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGH-----SLGVYLGALLIH-RLGSARRPVPAAKIFS 419
L+ K K EI+ EM G + V + +H L + +
Sbjct: 955 LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1014
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ P T+ L+ Y + A IYK MC +G+ P T+ L+ G
Sbjct: 1015 IAPN----ATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKG 1063
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++K W + + +G + +TY +++ + +++ + F M +GI D + YT
Sbjct: 720 LDKVWKLIEKM-KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYT 778
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ GD+ A + EM ++ P +++YTA + + EA ++ EM+ R
Sbjct: 779 TLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCR 838
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GL P+ T+T LM +AG ++A + + M +AG P+ LI+ CK G+
Sbjct: 839 GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 894
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N D TYTT++D + ++ + + + M KG+ VT+ +M+ G ++
Sbjct: 944 GLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 1003
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN---------- 170
+ M K P ++ +K + + +K AT +YK+M RG+ P+
Sbjct: 1004 EKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKG 1063
Query: 171 -------------------------CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
TY+VL++ + K+ EA EIF +M+ G+ D
Sbjct: 1064 HCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAAD 1123
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRL 237
K + + K TI+ + + EN L
Sbjct: 1124 KEIFDFFSDTKYKGKRPDTIVDPIDEIIENYL 1155
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 141/354 (39%), Gaps = 29/354 (8%)
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK-AGETRTIILILRYM 232
+ V + LV G EA ++F KM G+ +CN+ + + K +T T I++ R
Sbjct: 601 FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF 660
Query: 233 KEN----RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS----DNDAVEFVTT 284
E +A V Q ++ + + LL ++P+ IS N F
Sbjct: 661 PEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGEL 720
Query: 285 D-----IE-------GPLSIDQGLVLILLKK-KNLVAIDSLLSGIMDKSIQLDSAVISTI 331
D IE P S G ++ LL + L + S ++ + I D+ V +T+
Sbjct: 721 DKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTL 780
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ C A F D+ + Y A+I ++ + ++ EM G
Sbjct: 781 VDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGL 840
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKAL 448
+ L++ A A ++ + + + C+ TYT LI G D A
Sbjct: 841 EPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSAN 899
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
++ M + G+ P++ T+N ++ GL K G + +A K +A L+ D V
Sbjct: 900 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA---VKLVGEFEAAGLNADTV 950
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +E NW+ ++G + T+ ++ + + + +++ M +G+ D
Sbjct: 997 HGMLEDGEKLLNWM-LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +++ NA ++ A +++EMK K ++ +Y+ +K F + EA +++ +M
Sbjct: 1056 TYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ GL + +E + FS + G +PD
Sbjct: 1116 RRDGLAAD-----------------KEIFDFFSDTKYKGKRPD 1141
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R + TY+ +LD F + ++ K +FE M I+ D VTY+S+++ L +D
Sbjct: 254 RKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ M K C+P +VSY + RV++ ++++M QRGL N TY L++
Sbjct: 314 ANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQ 373
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G ++A E FS+M GV PD NIL+ C G ++I M+++ + L
Sbjct: 374 GFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDL 433
Query: 240 RYPVFKEALQ----TFKVAD 255
+ +Q T KV D
Sbjct: 434 DIVTYTTVIQGMCKTGKVED 453
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 14/276 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D Y ++D + +R++ F+ + KGI + VTYT++++ L N+G + A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M ++ P +++Y+A + N +V EA ++++EM++ + P+ TY+ L+
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + +EA ++F M G PD + N LI CKA + + R M + L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ +Q F + D + EF S D+ V+ DI + GL
Sbjct: 365 TVTYNTLIQGFFQVGDVDK---------AQEFFSQMDSFG-VSPDIWTYNILLGGLCDNG 414
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
L +K LV + + MD LD +T+I+ C
Sbjct: 415 LLEKALVIFEDMQKSEMD----LDIVTYTTVIQGMC 446
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 2/215 (0%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ KY S ++ L I+ D YT N V+ + L + + + G+
Sbjct: 92 LSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGY 151
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
DR T ++++ F R+S + + M E G D V Y +++ L V+ A++
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALD 211
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++E+ K P +V+YTA + L + R +A + ++MI+R + PN TY+ L++ V
Sbjct: 212 FFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFV 271
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ GK EA EIF +M + PD + LI C
Sbjct: 272 KNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLC 306
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FF + R +G + TYT +++ + R + + M ++ I + +TY++++
Sbjct: 212 FFKEIGR-KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAF 270
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G V A I+EEM P IV+Y++ + L L+DR+ EA ++ M+ +G P+
Sbjct: 271 VKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDV 330
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+Y L+ +A + E+ +++F KM + G+ + N LI+ + G+
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGD 380
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F+ + S+G D +Y T+++ F +AKR+ +F M ++G+ + V
Sbjct: 308 HDRIDEANQMFDLMV-SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTV 366
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +++ GDVD A + +M P I +Y + L N +++A ++++M
Sbjct: 367 TYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDM 426
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ + + TYT +++ + + GK E+A +F + G++PD ++ C G
Sbjct: 427 QKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQ 486
Query: 223 RTIILILRYMKENRL 237
+ + MK+ L
Sbjct: 487 HEVEALYTKMKQEGL 501
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 171/433 (39%), Gaps = 52/433 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +D +T+ +++ F ++S V M + G D VT S+++ V A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V++ ++M P IV+Y A + L RV +A D +KE+ ++G+ PN TYT L+
Sbjct: 175 VSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNG 234
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +G++ +A + M + + P+ + L++ ++K ++
Sbjct: 235 LCNSGRWNDAARLLRDMIKRKITPNVITYSALLDA---------------FVKNGKVLEA 279
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+F+E V P+ ++ + S+ GL L
Sbjct: 280 KEIFEE----------------MVRMSIDPDIVTYS--------------SLINGLCL-- 307
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+ + + ++ K D +T+I C +R + + F + L
Sbjct: 308 --HDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNT 365
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI ++ K E +M G S ++ +L+ L A IF
Sbjct: 366 VTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFED 425
Query: 421 LPEDQK--CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ + + TYT +I G + A ++ ++ KG+ P + T+ +++GL G
Sbjct: 426 MQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 479 VSDAE-IYRKEKK 490
+ E +Y K K+
Sbjct: 486 QHEVEALYTKMKQ 498
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 150/385 (38%), Gaps = 30/385 (7%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+N++ EM +P+IV + + + + + K+M G+ + YT+ +++
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE----N 235
+ AL + KM + G +PD+ L+ C+ + ++ M E
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + +T +V D D P ++ V + G +
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCN--SGRWNDAAR 246
Query: 296 LVLILLKKK---NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L+ ++K+K N++ +LL + L++ I FE V
Sbjct: 247 LLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEI-------------------FEEMV 287
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+M ++ + Y +LI L + + ++ + M G V LI+ A+R
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347
Query: 413 PAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
K+F + + T TY LI +F G DKA + + M G+ P + T+N+LL
Sbjct: 348 DGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILL 407
Query: 471 AGLEKLGRVSDAEIYRKEKKSIQAD 495
GL G + A + ++ + + D
Sbjct: 408 GGLCDNGLLEKALVIFEDMQKSEMD 432
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FF+ + S G + D +TY +L + + +FE MQ+ +++D VTYT
Sbjct: 381 VDKAQEFFSQMD-SFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYT 439
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+V+ + G V+ A ++ + LK P IV+YT M L E +Y +M Q
Sbjct: 440 TVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQE 499
Query: 166 GLPPN 170
GL N
Sbjct: 500 GLMKN 504
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 204/479 (42%), Gaps = 71/479 (14%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRS-RGFN-HDRFTYTTMLDIFGEAKRISSMKYVF--E 90
TV +VL+ ++ + FF WV+RS RG + H+ FT +L +A+R +F E
Sbjct: 36 TVGRVLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDE 95
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
L+ + + + +TY +++ AGD++ A + EMK + P +V++++ ++ L
Sbjct: 96 LLGQH-CDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTG 154
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+ A ++E ++ P+ + +L+ L +A + EA ++ +M E G+ PD N
Sbjct: 155 NLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYN 212
Query: 211 ILIEKCCKA---GETRTII--LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
LI+ CK+ E R ++ ++ R ++ N + ++ +T + + +
Sbjct: 213 SLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYC-KTGCTGLAHQLIERMIQ 271
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK-----NLVAIDSLLSGIMD-- 318
P+ ++ N + + ID+ ++ L KK NLV + L+SG+ D
Sbjct: 272 SGTHPDVVTFNSLISGFCQKSK----IDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAG 327
Query: 319 --------------KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ I D +++I + C + + + A V+ + + +Y
Sbjct: 328 RANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYC 387
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
L L+K F + +++ M AG +P F+ L E
Sbjct: 388 TLAVALLKSERFDEAFALLDNMFDAG--------------------AIPNLFTFNSLMEG 427
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
C+ D+A + M R G P+ T+ VL+ GL K GRV DA+
Sbjct: 428 LCCSRRL-------------DEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAK 473
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D T+ +++ F + +I V LM++ + VTY ++ L +AG + A
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM + P I++Y + + I N ++++A + M++RG+ P+ +Y L
Sbjct: 333 CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVA 392
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK-CC--KAGETRTIILILRYMKENRL 237
L+++ +++EA + M +AG P+ N L+E CC + E R ++ ++R + +
Sbjct: 393 LLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPA 452
Query: 238 ALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSP 270
A Y V L + +V D + L+ V P
Sbjct: 453 ASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG D TY +++ IF +I + LM E+G+ D ++Y ++ L + D
Sbjct: 341 GRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFD 400
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + + M P + ++ + M+ L + R+ EA + M + G P TY VL+
Sbjct: 401 EAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLV 460
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L +AG+ ++A E+ M G+QP ++ ++ + G+ L L Y + A
Sbjct: 461 TGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQD---LALHYFDQVVAA 517
Query: 239 LRY---PVFKEALQTFKVADENDS 259
P +++ L+ KV E S
Sbjct: 518 ESKACDPSYQKLLEFVKVLREGKS 541
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRK 457
L+ L ARR A +IF Q C TY LIG + AG ++A ++ M +
Sbjct: 75 LLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKER 134
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADAL 497
G P + T + ++ L G +S A Y +E D++
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSV 174
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 170/415 (40%), Gaps = 20/415 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ +++D G+ R+ ++E M + +++ YTS++ N G + I+
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M + C P + YM +F ++ +++E+ R P+ +Y++L+ L++A
Sbjct: 506 KDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKA 565
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G E E+F M+E G D A NI+I+ CK G+ +L MK +
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS-IDQG-LVLILLK 302
+ D D + + + + I N + D G + ID+ L+L L
Sbjct: 626 GSVIDGLAKIDRLDE-AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+K L + ++D ++ + E+N AL+ F+ ++ +
Sbjct: 685 QKGLTPNVYTWNSLLDALVKAE--------EIN-------EALVCFQSMKELKCTPNQVT 729
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y LI L K+ F K +EM K G +I L A A +F
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 423 EDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ +A Y A+I + A A +++ R+G+H T VLL L K
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHK 844
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 171/421 (40%), Gaps = 24/421 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++D+ A ++ + + MQ+ G+ + T ++ L + +D A I+E+M
Sbjct: 379 TYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQM 438
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C P +++ + + L RV +A +Y++M+ N YT L++ G+
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
E+ +I+ M PD N ++ KAGE + +K R A Y +
Sbjct: 499 EDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSIL 558
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
L A+E L + + Q + D A V I+G K
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGC---VLDTRAYNIV---IDG-----------FCKCG 601
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ LL + K + ++I+ R D A + FE + + L Y
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
+LI K+ + I+EE+ + G + VY L+ L A A F + E
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE- 720
Query: 425 QKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
KCT TY LI +KA ++ M ++G+ PS ++ +++GL K G +++
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 482 A 482
A
Sbjct: 781 A 781
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S ++ ++K E LF++ + +G D Y ++D F + +++ + E M
Sbjct: 556 SILIHGLIKAGFANETYELFYSM--KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ KG VTY SV+ L+ +D A ++EE K K +V Y++ + R+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EA + +E++Q+GL PN YT+ L++ LV+A + EAL F M+E P++ IL
Sbjct: 674 DEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 213 IEKCCK 218
I CK
Sbjct: 734 INGLCK 739
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 198/480 (41%), Gaps = 41/480 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW FF+ + + G D TYT+M+ + +A R+ +FE +++ Y
Sbjct: 254 VDMAWKFFHEIE-ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +AG D A ++ E + K P++++Y + L +V EA V++EM ++
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KK 371
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEI---------FSKMQEAGVQPDK--------AA 208
PN TY +L++ L RAGK + A E+ F ++ + D+ A
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 209 CNILIE---KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ-- 263
C I + K C E LI K R+ Y ++++ L + +S+++
Sbjct: 432 CAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDS---DCRTNSIVYTSL 488
Query: 264 VHPQFSPEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
+ F+ D + + V + L + + + K ++ I +
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF 548
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVK-MDLNLERTAYLALIGILIKLNTFPKVA 380
D+ S +I + F YS+K L+ AY +I K K
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELF-YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC------TATYTAL 434
+++EEM G V +I L R A +F E+ K Y++L
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF----EEAKSKRIELNVVIYSSL 663
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
I + G D+A I + + +KG+ P++ T+N LL L K +++A + + K ++
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S + D Y +D FG+ ++ F ++ G+ D VTYTS++ L A +
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL 289
Query: 118 DGAVNIWEEM-----------------------KLKECY------------PTIVSYTAY 142
D AV ++E + K E Y P++++Y
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ L +V EA V++EM ++ PN TY +L++ L RAGK + A E+ MQ+AG+
Sbjct: 350 LTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGL 408
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYM 232
P+ NI++++ CK+ + I M
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAIFEQM 438
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 153/363 (42%), Gaps = 31/363 (8%)
Query: 39 VLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
+ K P EK F + +SR F D +Y+ ++ +A + +F M+E+G
Sbjct: 527 MFKAGEP-EKGRAMFEEI-KSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
+D Y V+ G V+ A + EEMK K PT+V+Y + + L DR+ EA +
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
++E + + N Y+ L++ + G+ +EA I ++ + G+ P+ N L++ K
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVK 704
Query: 219 AGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDS-LLWQVHPQ--FSPEF 272
A E ++ + MKE + + Y + L KV N + + WQ + P
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGL--CKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
IS TT I G L K N+ +L DSA + +I
Sbjct: 763 IS-------YTTMISG-----------LAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK---VAEIVEEMTKA 389
E + R A FE + + L++ + L+ L K + + V ++ E KA
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKA 864
Query: 390 GHS 392
H+
Sbjct: 865 RHA 867
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 102/528 (19%), Positives = 195/528 (36%), Gaps = 53/528 (10%)
Query: 2 RDTISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
R ++++ +L+ W SA++ L L K V VL+ + +A +F W R
Sbjct: 33 RQIVNDICNVLETGAWGPSAENALSALNFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRT 92
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN---------------------- 98
H +Y ++L + + ++ + M G
Sbjct: 93 ELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREG 152
Query: 99 IDAV-------------TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
D V YT+++ S D + ++++M+ PT+ +T ++
Sbjct: 153 FDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG 212
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
RV A + EM L + Y V ++ + GK + A + F +++ G++PD
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
+ +I CKA + + ++++NR + + + A + D +
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
Q + I A + T + +D+ L + KK+ S + ++D
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILID------- 385
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
++ +++C RD A + +N+ ++ L K + I E+
Sbjct: 386 -MLCRAGKLDCAFELRDSMQKAGLFPNVRTVNI-------MVDRLCKSQKLDEACAIFEQ 437
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKCTA-TYTALIGVYFSAGS 443
M + LI LG R A KI+ +L D + + YT+LI +F+ G
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ KIYK M + P L N + + K G +E KS
Sbjct: 498 KEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKS 545
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 136/353 (38%), Gaps = 58/353 (16%)
Query: 152 VKEATDVYKEMIQRGLPPNC-YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
V A + ++ +R P+C +Y L+ + R ++ +I +M AG P C
Sbjct: 78 VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCI 137
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL--WQVHPQF 268
++ C KA + R +++ M++ + + + + F + +D +L +Q +
Sbjct: 138 EMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 269 SPEFISDNDAVEFVTTDIEG---PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
E V TT I G +D L L+ D + S +D I L +
Sbjct: 198 GYE-----PTVHLFTTLIRGFAKEGRVDSALSLL----------DEMKSSSLDADIVLYN 242
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
I + +V + D A F L + Y ++IG+L K N + E+ E
Sbjct: 243 VCIDSFGKVG----KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
+ K R VP CT Y +I Y SAG D
Sbjct: 299 LEK--------------------NRRVP-------------CTYAYNTMIMGYGSAGKFD 325
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALS 498
+A + + KG PS+ +N +L L K+G+V +A +E K A LS
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLS 378
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 11/268 (4%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
W+SA+ LLK + +K SY +++L + +KA+ + S G DR Y
Sbjct: 355 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS-GVQPDRHFYN 413
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
M+D FG+ + VF M+ +GI D VT+ +++ G D A+ +++EM+
Sbjct: 414 VMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRES 473
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P +Y + +L +R + EM ++GL PN TYT L++ R+G+Y+EA
Sbjct: 474 NCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEA 533
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++ M+ G++P + L+ + G + +++ M+ + L V +
Sbjct: 534 IDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINA 593
Query: 251 F----KVADENDSLLWQVHPQFSPEFIS 274
F +V + L + F P+ I+
Sbjct: 594 FGEDRRVVEAFSVLQFMKENDFRPDVIT 621
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 159/398 (39%), Gaps = 25/398 (6%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+++ + DA ++ ++ + A D A+ + + P + TA + L + R
Sbjct: 224 LRDSRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGR 283
Query: 152 VKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
V EA ++ E G + P Y L++ V+ G + A + +M E GV PD+A +
Sbjct: 284 VPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYS 343
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ----VHP 266
+L++ +AG + ++L+ M+ + + VF L F+ D D WQ V
Sbjct: 344 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR--DRGD---WQKAFAVLR 398
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ + + V D G K L + + + + I+ D
Sbjct: 399 EMHASGVQPDRHFYNVMIDTFG-------------KYNCLGHAMDVFNRMRGEGIEPDVV 445
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+T+I+ +C R D A+ F+ + + T Y +I +L + + V ++ EM
Sbjct: 446 TWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEM 505
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSA 444
+ G + L+ G + R A + D + Y AL+ Y G A
Sbjct: 506 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 565
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D AL + K M G+ S N L+ + RV +A
Sbjct: 566 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEA 603
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 133/331 (40%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D + A R S + + + M+ G+ + ++ ++ + GD A
Sbjct: 334 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 393
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM P Y + + + A DV+ M G+ P+ T+ L++
Sbjct: 394 FAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDA 453
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+++ A+E+F +M+E+ P NI+I + + ++ MKE L
Sbjct: 454 HCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPN 513
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-LSIDQGLVLI 299
+ + + S + D +E + D P ++ LV
Sbjct: 514 IITYTTLVDVYGR---------------SGRYKEAIDCIEAMKADGLKPSPTMYHALVNA 558
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
++ +++ + ++ + V++++I + RR A ++ + D +
Sbjct: 559 YAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPD 618
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
Y L+ LI++ F KV I EEM +G
Sbjct: 619 VITYTTLMKALIRVEQFDKVPVIYEEMITSG 649
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + TYTT++D++G + R E M+ G+ Y ++++ + G
Sbjct: 506 KEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 565
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+N+ + M+ + V + + + RV EA V + M + P+ TYT L
Sbjct: 566 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTL 625
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M+ L+R ++++ I+ +M +G PD+ A +L LRYMK R+
Sbjct: 626 MKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSA-------------LRYMKHTRV 672
Query: 238 A 238
A
Sbjct: 673 A 673
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 177/455 (38%), Gaps = 27/455 (5%)
Query: 33 SYTVNQVLKTHPPMEKAWL--FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
S+ + +L T P + A L + SR D ++ ++ F A + +
Sbjct: 199 SHLLASLLNTRDPPDAAILERLLGDLRDSR-LEPDAPLFSDLISAFARAALPDAALELLA 257
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLN 149
Q G+ + T+++ L AG V A ++ E L E P +Y A +K
Sbjct: 258 SAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKI 317
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+K A V EM + G+ P+ TY++L++ RAG++E A + +M+ GV+P
Sbjct: 318 GSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF 377
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLAL-------------RYPVFKEALQTFKVAD- 255
+ ++ G+ + +LR M + + +Y A+ F
Sbjct: 378 SRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRG 437
Query: 256 ---ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG---PLSIDQGLVLILL-KKKNLVA 308
E D + W + + A+E E P + +++ LL +++ V
Sbjct: 438 EGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVG 497
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+++++S + ++ + + +T+++V R A+ E L T Y AL+
Sbjct: 498 VETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVN 557
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
+ +V+ M G + LI+ G RR V A + + E+ +
Sbjct: 558 AYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSVLQFMKENDFRP 617
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
TYT L+ DK IY+ M G P
Sbjct: 618 DVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAP 652
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 170/430 (39%), Gaps = 36/430 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G FTY M+D + + + +F M+E G D VTY S++ G +D
Sbjct: 49 AAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLD 108
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ I+E+MK +C P +++Y A + +R+ +A + EM GL PN TY+ +
Sbjct: 109 ECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFI 168
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + G +EA++ F M+ + P++ LI+ CKAG + ++ + + +
Sbjct: 169 DAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK 228
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
L + L D L + + + E + + LV
Sbjct: 229 LNVVTYTALL---------DGLCEEGRMKEAEEVFR-----AMLNAGVAPNQETYTALVH 274
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+K K + +L + +K I+ D + TI+ C+ R + A L + +N
Sbjct: 275 GFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINT 334
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y L+ K + ++EEM L+ L A K+F
Sbjct: 335 NAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGLCKNNCFEVAKKLF 382
Query: 419 ------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++P+ YTALI G+ +AL + M G+ L + L+ G
Sbjct: 383 DEMLDKGMMPD----KIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWG 438
Query: 473 LEKLGRVSDA 482
L G+V A
Sbjct: 439 LSHSGQVQKA 448
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 173/426 (40%), Gaps = 66/426 (15%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M KA+ F + + ++ G + TY+T +D F + + F M+ + + TYT
Sbjct: 142 MPKAFEFLHEM-KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 200
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ AG++ A+ + EE+ +V+YTA + L R+KEA +V++ M+
Sbjct: 201 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 260
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN TYT L+ ++A + E A +I +M+E ++PD ++ C
Sbjct: 261 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 320
Query: 226 ILILRYMKE---NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
L++ +KE N A+ Y +A FK ++L
Sbjct: 321 KLLIGEIKESGINTNAVIYTTLMDAY--FKSGQATEAL---------------------- 356
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
T +E L + GL K L ++DK + D + +I+ N H
Sbjct: 357 -TLLEEMLDLVDGLC----KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQ 411
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
AL + +++ + L+ AY ALI L K +++EM G
Sbjct: 412 EALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKG------------ 459
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
+LP++ Y LI Y++ G D+AL++ M ++G+
Sbjct: 460 -----------------VLPDE----VVYMCLIKKYYALGKVDEALELQNEMAKRGMITG 498
Query: 463 LGTFNV 468
L V
Sbjct: 499 LSDHAV 504
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 152/403 (37%), Gaps = 39/403 (9%)
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+++H LS G D + +++M ++ +Y + L ++ A ++ +M +
Sbjct: 25 NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKE 84
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
G P+ TY L++ + G +E + IF +M++A PD N LI CK
Sbjct: 85 AGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPK 144
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
L MK N L + TF A + +L Q + +F D V
Sbjct: 145 AFEFLHEMKANGLKPNVVTY----STFIDAFCKEGML-----QEAIKFFVDMRRVALTPN 195
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ ID K NL L+ I+ I+L+ + +++ C+ R A
Sbjct: 196 EFTYTSLIDAN-----CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEA 250
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F + + + Y AL+ IK +I++EM + + L ++
Sbjct: 251 EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 310
Query: 405 LGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKAL-------------- 448
L + R A + + E T YT L+ YF +G A +AL
Sbjct: 311 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLC 370
Query: 449 ---------KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
K++ M KG+ P + L+ G K G + +A
Sbjct: 371 KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA 413
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 140/376 (37%), Gaps = 62/376 (16%)
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
+P S A + L R + +K+M G+ + +TY ++++YL + G E A
Sbjct: 18 FPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARS 77
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+F++M+EAG PD N LI+ K G I I MK+
Sbjct: 78 LFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD------------------ 119
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
P+ I+ N L+ K + +
Sbjct: 120 -------------ADCDPDVITYN------------------ALINCFCKFERMPKAFEF 148
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
L + ++ + ST I+ C A+ F ++ L Y +LI K
Sbjct: 149 LHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK 208
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL------PEDQK 426
+ ++VEE+ +AG L V L+ L R A ++F + P +
Sbjct: 209 AGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQE- 267
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
TYTAL+ + A + A I K M K I P L + +L GL R+ +A++
Sbjct: 268 ---TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 324
Query: 487 KEKKSIQADALSKDAV 502
E I+ ++ +AV
Sbjct: 325 GE---IKESGINTNAV 337
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 8 VYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRG 61
V+ +K + A+D+LK + IK D +L +E+A L + S G
Sbjct: 273 VHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES-G 331
Query: 62 FNHDRFTYTTMLDIF---GEAKRISSM--------------------KYVFELMQEKGIN 98
N + YTT++D + G+A ++ K +F+ M +KG+
Sbjct: 332 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMM 391
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
D + YT+++ G++ A+N+ + M + +YTA + L + +V++A ++
Sbjct: 392 PDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNL 451
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
EMI +G+ P+ Y L++ GK +EALE+ ++M + G+
Sbjct: 452 LDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 19/222 (8%)
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K+ +L SL + + + D +++I+ + D + FE D + +
Sbjct: 66 LCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPD 125
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y ALI K PK E + EM G V + I A K F
Sbjct: 126 VITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFV 185
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+L P + TYT+LI AG+ +ALK+ + + + GI ++ T+ LL GL
Sbjct: 186 DMRRVALTPNE----FTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241
Query: 474 EKLGRVSDA-EIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
+ GR+ +A E++R L+ P +E L++G
Sbjct: 242 CEEGRMKEAEEVFRA--------MLNAGVAPNQETYTALVHG 275
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 169/433 (39%), Gaps = 60/433 (13%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME W ++ + G D +TY+T L+ +A+ + K VFE M+ + ++ VTY
Sbjct: 226 MELVWKLKGFMEGA-GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYN 284
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L +G V+ A EEM P +Y A M L R+KEA + EM
Sbjct: 285 VMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCS 344
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN Y L++ ++ GK EA +I ++M AGVQP+K + LI CK G+
Sbjct: 345 GLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 404
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+L M KV D+ + HP F D
Sbjct: 405 SKLLNEM------------------IKVGHRPDTFTY--HPLMQG---------HFQHYD 435
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
+G LL+ + + I ++ +I C + A
Sbjct: 436 KDGAF--------------------ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
E + L Y LI K E +E MTKA ++ LI L
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535
Query: 406 GSARRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ R A + ++ L+P++ TY+ LI Y + +KA ++ + M G+
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDE----FTYSGLIHGYCKTRNLEKADQLLQQMLNSGL 591
Query: 460 HPSLGTFNVLLAG 472
P+ T+ LL G
Sbjct: 592 KPNADTYTDLLEG 604
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 158/408 (38%), Gaps = 85/408 (20%)
Query: 81 RISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
R +M+ V++L M+ GI D TY++ + A D D A ++EEM+ ++C V
Sbjct: 222 RADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEV 281
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + L + V+EA +EM+ GL P+ +TY LM L + G+ +EA + +M
Sbjct: 282 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM 341
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
+G++P N+++ L+ +MKE + A + + E +
Sbjct: 342 SCSGLKP-----NVVV----------YATLVDGFMKEGKAAEAFDILNEMISA------- 379
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
V P + + DN L+ L K L LL+ ++
Sbjct: 380 -----GVQPN---KIMYDN-------------------LIRGLCKIGQLGRASKLLNEMI 412
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+ D+ +++ + H +DGA + Y +I L +
Sbjct: 413 KVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESK 472
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGV 437
+ ++EEM G ++ A LI +G ++
Sbjct: 473 EAGNLLEEMISEGLKPNAFMYAPLI--IGHSKE--------------------------- 503
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
G A + + M + + P L +N L+ GL +GR+ +AE Y
Sbjct: 504 ----GHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEY 547
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 81 RISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
R +M+ F ++ E G+ D Y+S++ L D++ AV + +EM + P IV
Sbjct: 642 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIV 701
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
Y A + + + A +V+ ++ +GL PNC TYT L++ + G +A +++ M
Sbjct: 702 CYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDM 761
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVA 254
+ G+ PD N+L C A + + + M NR +F ++ F
Sbjct: 762 LDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF-NRGYAHVSLFSTLVRGFCKRGRL 820
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
E + LL H E + + VE V T+
Sbjct: 821 QETEKLL---HVMMDREIVPNAQTVENVITEF 849
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 161/458 (35%), Gaps = 100/458 (21%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G ++ Y ++ + ++ + M + G D TY +M D D
Sbjct: 378 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKD 437
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL- 177
GA + EM+ P +Y + L N KEA ++ +EMI GL PN + Y L
Sbjct: 438 GAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 497
Query: 178 ---------------MEYLVRA-------------------GKYEEALEIFSKMQEAGVQ 203
+E + +A G+ EEA E ++++Q+ G+
Sbjct: 498 IGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLV 557
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD+ + LI CK TR + ++ D LL Q
Sbjct: 558 PDEFTYSGLIHGYCK---TRNL-----------------------------EKADQLLQQ 585
Query: 264 -VHPQFSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
++ P + D +E F + D E + S+L ++
Sbjct: 586 MLNSGLKPNADTYTDLLEGYFKSNDHE--------------------KVSSILQSMLGSG 625
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
+ D+ + +I + A + K L + Y +LI L K+ K
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAV 685
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTAL 434
+++EM K G G+ LI + A +F LLP TYTAL
Sbjct: 686 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPN----CVTYTAL 741
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
I G A +YK M +GI P +NVL G
Sbjct: 742 IDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG 779
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 30 KWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
+ D++T + +++ H + A+ N + R+ G + +TY M++ +
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEM-RNSGILPNAYTYGIMINGLCQNGESKEAG 475
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ E M +G+ +A Y ++ S G + A E M P + Y + +K L
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
R++EA + Y ++ +RGL P+ +TY+ L+ + E+A ++ +M +G++P+
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595
Query: 207 AACNILIEKCCKAGETRTIILILRYM 232
L+E K+ + + IL+ M
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSM 621
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 93/193 (48%), Gaps = 4/193 (2%)
Query: 32 DSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D + N ++K T +E+A ++ V + RG D FTY+ ++ + + + + +
Sbjct: 524 DLFCYNSLIKGLSTVGRIEEAEEYYAQVQK-RGLVPDEFTYSGLIHGYCKTRNLEKADQL 582
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+ M G+ +A TYT ++ + D + +I + M P Y ++ L
Sbjct: 583 LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
++ ++ A V E+ + GL P+ + Y+ L+ L + E+A+ + +M + G++P
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVC 702
Query: 209 CNILIEKCCKAGE 221
N LI+ C++G+
Sbjct: 703 YNALIDGFCRSGD 715
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 9/227 (3%)
Query: 18 DSAQDLL---KNLPIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D A +LL +N I ++YT +N + + E L +S G + F Y
Sbjct: 437 DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISE--GLKPNAFMYA 494
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
++ + IS E M + + D Y S++ LS G ++ A + +++ +
Sbjct: 495 PLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKR 554
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P +Y+ + +++A + ++M+ GL PN TYT L+E ++ +E+
Sbjct: 555 GLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKV 614
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
I M +G +PD I+I ++ ++L +++N L
Sbjct: 615 SSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 661
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 114/287 (39%), Gaps = 16/287 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA + S G + TYT +L+ + ++ + + + M G D Y
Sbjct: 576 LEKADQLLQQMLNS-GLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYG 634
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
V+ LS + +++ A + E++ P + Y++ + L +++A + EM +
Sbjct: 635 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKE 694
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P Y L++ R+G A +F + G+ P+ LI+ CK G+
Sbjct: 695 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDA 754
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ + M + +A V+ A + + L+ F+ + V +T
Sbjct: 755 FDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAH----VSLFSTL 810
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+ G K+ L + LL +MD+ I ++ + +I
Sbjct: 811 VRG-----------FCKRGRLQETEKLLHVMMDREIVPNAQTVENVI 846
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 16/191 (8%)
Query: 304 KNLVAIDSL-----LSGIMDKS-IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K+L+ D++ L G M+ + I D ST +E +C R D A FE + D
Sbjct: 218 KDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCA 277
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ Y +I L + + EEM G S + L++ L R A +
Sbjct: 278 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKAL 337
Query: 418 FSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
++ C+ Y L+ + G A +A I M G+ P+ ++ L+
Sbjct: 338 L----DEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIR 393
Query: 472 GLEKLGRVSDA 482
GL K+G++ A
Sbjct: 394 GLCKIGQLGRA 404
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 172/428 (40%), Gaps = 67/428 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y ++ F + RI + V M+ +G D VTY ++ L N + A+ +
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVL 195
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+++ L C PT+++YT ++ + + EA + +EM+ RGL P+ YTY ++ + +
Sbjct: 196 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 255
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA-----GETRTIILILRYMKENRLAL 239
G E A E+ + + G +PD + NIL+ GE + R + N++
Sbjct: 256 GMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT- 314
Query: 240 RYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y + +L F DE S+L + + +P+ S + L+
Sbjct: 315 -YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP------------------LIS 355
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQ----LDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L K+ L L GIMD I D +TI+ C + + AL F M
Sbjct: 356 ALCKEGRL----DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGM 411
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
++Y +I L + +V M G
Sbjct: 412 GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVD---------------------- 449
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
P++ TY +LI G ++A+ + M + G P++ ++N++L GL
Sbjct: 450 -------PDE----ITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498
Query: 475 KLGRVSDA 482
K+ R+ DA
Sbjct: 499 KVRRIDDA 506
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG ++ TY+ ++ RI V ++M EK + D +Y ++ L G +D
Sbjct: 305 SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLD 364
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I + M C P IV+Y + L N +A +++ ++ G PPN +Y ++
Sbjct: 365 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 424
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L G AL + M GV PD+ N LI C+ G I +L M+++
Sbjct: 425 SALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 481
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 141/367 (38%), Gaps = 58/367 (15%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKR-----------------------------------I 82
++RGF D TY M+ ++ I
Sbjct: 164 KARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGI 223
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+ + E M +G+ D TY +++ + G V+ A + + K C P ++SY
Sbjct: 224 NEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNIL 283
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
++ + E + EM RG PN TY++L+ L R G+ +EA+ + M E +
Sbjct: 284 LRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 343
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDS 259
PD + + LI CK G I I+ YM N + Y AL A++
Sbjct: 344 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 403
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK---KNLVAIDSLLS-- 314
+ ++ P +S + + G S G+V ++ K + + +SL+S
Sbjct: 404 IFNKLRGMGCPPNVSSYNTMISALWSC-GDRSRALGMVPAMISKGVDPDEITYNSLISCL 462
Query: 315 ---GIMDKSIQL-----DSAVISTIIEVN------CDHRRRDGALLAFEYSVKMDLNLER 360
G+++++I L S T+I N C RR D A+ F ++
Sbjct: 463 CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNE 522
Query: 361 TAYLALI 367
T Y+ LI
Sbjct: 523 TTYILLI 529
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D Y T+L + + +F ++ G + +Y +++ L + GD
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + M K P ++Y + + L + V+EA + +M Q G P +Y +++
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + + ++A+ +F++M E G +P++ +LIE AG RT + L +R
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG-WRTEAMELANSLFSRDV 553
Query: 239 LRYPVFKEALQTFKVAD 255
+ FK +TF + D
Sbjct: 554 ISQDSFKRLNKTFPMLD 570
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/505 (19%), Positives = 210/505 (41%), Gaps = 33/505 (6%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ K+ +ST S + + I + YT++ ++ + + + F+ +++ H
Sbjct: 68 LTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGH 127
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I ++F+ M +G D VTY ++++ L G+ A+
Sbjct: 128 QPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M K C P + +Y + L + +V EA +++ EM+ +G+ P+ +TY L+ L
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII--LILRYMKENRL 237
+++ + ++M ++ + PD + N +++ CK G E ++ +I R ++ N +
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVV 307
Query: 238 ALR-----YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND------AVEFVTTDI 286
+ + E + KV D V P IS N ++ + I
Sbjct: 308 TYTALMDGHCLLSEMDEAVKVFDT------MVCKGCMPNVISYNTLINGYCKIQRIDKAI 361
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
+D + + + V + G M I + T+I C +R D A+
Sbjct: 362 HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYN-----TLINGYCKIQRIDKAMY 416
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
F + +L + Y LI L + + EM + +L+ L
Sbjct: 417 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 476
Query: 407 SARRPVPAAKIFSLLPE---DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
R A + + D A+ G+ AG + A ++ + KG+ P +
Sbjct: 477 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC-RAGELEAARDLFSNLSSKGLQPDV 535
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKE 488
T+++++ GL + G + +A +E
Sbjct: 536 WTYSIMINGLCRRGLLDEASKLFRE 560
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +Y T+++ + + +RI Y+F M + + D VTY++++H L + +
Sbjct: 389 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 448
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ EM P +V+Y + L N + EA + K + L P+ + ++
Sbjct: 449 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 508
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ RAG+ E A ++FS + G+QPD +I+I C+ G + R M EN L
Sbjct: 509 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 568
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
++ + F +E + + + F +D
Sbjct: 569 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 604
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 130/304 (42%), Gaps = 23/304 (7%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT ++D + VF+ M KG + ++Y ++++ +D A+ ++ EM
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+E P V+Y+ + L +R+++A ++ EM+ PN TY +L++YL +
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 482
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---------- 238
EA+ + ++ + + PD NI I+ C+AGE + + L
Sbjct: 483 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542
Query: 239 ---LRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDND---AVEFVTTDIEGPLS 291
R + EA + F+ DEN L ++ + F+ +N+ A++ + + S
Sbjct: 543 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 602
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST------IIEVNCDHRRRDGAL 345
D + + +K + +D L I+ + S S+ I++ H R + L
Sbjct: 603 ADASTMTLFVKMLSDDGLDQSLKQILRNGCKWISTFDSSSSTGLHILQKGISHERNESDL 662
Query: 346 LAFE 349
+ E
Sbjct: 663 VQAE 666
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/163 (17%), Positives = 72/163 (44%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +LD + + ++ + + ++ ++ D + + AG+++ A +++ +
Sbjct: 467 TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 526
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + +Y+ + L + EA+ +++EM + G N Y + +R +
Sbjct: 527 SSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNET 586
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
A+++ +M G D + + ++ G +++ ILR
Sbjct: 587 SRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 185/467 (39%), Gaps = 48/467 (10%)
Query: 16 TWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDI 75
T + +D L+ L S VN V++ E + FF W +R R F T+ ++D+
Sbjct: 47 TVNPMEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVIDM 105
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ + + E ++ I I T++ ++ + +G + AV + +MK C P
Sbjct: 106 LAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPD 165
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ +Y + + ++ + A VY +M++ PN T+ +L+ L + GK ++AL++F
Sbjct: 166 VFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFD 225
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
+M + G+ P+ I++ C+A T + +L MK + L F
Sbjct: 226 EMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGF---- 281
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
L Q+ F+ + + + I+G S+ G L + K +
Sbjct: 282 ---CKLGQIDEAFALLQLFEKEG---YVLGIKGYSSLIDG----LFRAKRYDEVQEWCRK 331
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ I+ D + + +I C+ D AL + L+ + Y ALI +
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGL 391
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALI 435
K + E++K P + TYT LI
Sbjct: 392 LDKARSLQLEISKN-----------------------------DCFPT----SCTYTILI 418
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G D+A +I+ M G PS+ TFN L+ GL K G + +A
Sbjct: 419 CGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D YT ++ F E + + M ++G++ D Y +++ + G +D A
Sbjct: 336 GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKA 395
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ E+ +C+PT +YT + + N + EA ++ +M G P+ T+ L++
Sbjct: 396 RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455
Query: 181 LVRAGKYEEALEIFSKMQEAGVQP--------------DKAACNILIEKCCKAG 220
L +AG+ EEA +F KM E G P D A+ ++E+ C++G
Sbjct: 456 LCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESG 508
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D + TM++ E+ I + + + G+ D +TY +++ A +++GA ++
Sbjct: 493 DTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLF 552
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E++LK P V+Y + DR ++A V +M++ G P+ Y LM + R
Sbjct: 553 RELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRK 612
Query: 185 GKYEEALEIFSK 196
GK A ++ K
Sbjct: 613 GKLSVAFSLWLK 624
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 3/198 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D TY T++D F R V + M + G + Y +M W G +
Sbjct: 558 KGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSV 617
Query: 120 AVNIWEEMKLKECYPTIVSYTAYM-KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++W +K P+ T + + F +++A EM + YT+ +
Sbjct: 618 AFSLW--LKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWL 675
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L +A + EEAL+IF ++E + + +C +LI CK G + I Y E
Sbjct: 676 IGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFM 735
Query: 239 LRYPVFKEALQTFKVADE 256
L + + L++ + D+
Sbjct: 736 LMPRICNQLLRSLILQDK 753
>gi|226492862|ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
gi|194706478|gb|ACF87323.1| unknown [Zea mays]
gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein ZEAMMB73_571639 [Zea mays]
Length = 442
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +Y+ +D ++ + VF+ M+++GI ID V Y + +H + A VD
Sbjct: 206 RGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDS 265
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV ++ +M C P I +Y A +K+ R KE ++M + G P+ TY +
Sbjct: 266 AVRLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQ 325
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
YL R +E L +F KM E G QP +LI++ + G R + ++ + M+E L+
Sbjct: 326 YLSRP---QEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLS 381
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +L + +A + ++ ++ M +G+ D +Y+ M L+ +G A +++EM
Sbjct: 179 THNLLLRGWAKAHAWARLRQLWFDMDRRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEM 238
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + V+Y + + + V A +Y++M+ G PN TY +++ + G++
Sbjct: 239 KQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYRQMVDAGCKPNIATYNAIIKLFCKEGRF 298
Query: 188 EEALEIFSKMQEAGVQPDKAACNI-----------------LIEKCCKAGETRTIILILR 230
+E +M++ G +PD + ++E+ C+ ++LI R
Sbjct: 299 KEGYAFVQQMRKTGCKPDVLTYHCFFQYLSRPQEVLGLFEKMLERGCQPRMDTYVMLIKR 358
Query: 231 YMKENRLALRYPVF 244
+ R PVF
Sbjct: 359 F---GRWGFLRPVF 369
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ +F + R + M++ G D +TY +LS +V G ++E+M
Sbjct: 284 TYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQYLSRPQEVLG---LFEKM 340
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P + +Y +K ++ V+K M ++GL P+ + Y L++ L++ G
Sbjct: 341 LERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNALIDALLQKGMV 400
Query: 188 EEALEIFSKMQEAGVQP 204
+ A + KM G+ P
Sbjct: 401 DLARKYDEKMLAKGLSP 417
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 324 DSAVISTIIEVNCDHRRRDGA-LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D +++ CDHRR D A L F +T L L G K + + ++ ++
Sbjct: 141 DEVSFHILVDALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRG-WAKAHAWARLRQL 199
Query: 383 VEEMTKAG-----HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
+M + G HS +Y+ AL + +P A K+F + + + T Y I
Sbjct: 200 WFDMDRRGVAKDLHSYSIYMDAL-----AKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAI 254
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD--AEIYRKEKKSIQ 493
A D A+++Y+ M G P++ T+N ++ K GR + A + + K +
Sbjct: 255 HAVGMAQGVDSAVRLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCK 314
Query: 494 ADALS 498
D L+
Sbjct: 315 PDVLT 319
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 166/390 (42%), Gaps = 16/390 (4%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V+E M GI+ +A T+ + H L GD D ++M+ + P +V+Y +
Sbjct: 235 VYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYC 294
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
R+++A +YK M RG+ PN T+TVLM L GK +EA ++F +M G+ PD
Sbjct: 295 KKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVV 354
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+ N L+ C+ G+ + +L M N + + ++ F + LL +
Sbjct: 355 SYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFA---RDGKLLSAL--- 408
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
N VE I+ P + L++ L + A S L I
Sbjct: 409 --------NTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINT 460
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ ++E C + AL+ VK + L AY A+I L ++N + ++EEM
Sbjct: 461 YNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMV 520
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSAD 445
+G V + LI+ + A + + + T +Y A++ V+ G+
Sbjct: 521 SSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVVKVFCDVGNVA 580
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ L++ + + G + T ++ GL+K
Sbjct: 581 ELLELQDKLLKVGYVSNRLTCKYVIHGLQK 610
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 185/467 (39%), Gaps = 48/467 (10%)
Query: 16 TWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDI 75
T + +D L+ L S VN V++ E + FF W +R R F T+ ++D+
Sbjct: 47 TVNPMEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSF-RSWVTHNLVIDM 105
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ + + E ++ I I T++ ++ + +G + AV + +MK C P
Sbjct: 106 LAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPD 165
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ +Y + + ++ + A VY +M++ PN T+ +L+ L + GK ++AL++F
Sbjct: 166 VFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFD 225
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
+M + G+ P+ I++ C+A T + +L MK + L F
Sbjct: 226 EMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGF---- 281
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
L Q+ F+ + + + I+G S+ G L + K +
Sbjct: 282 ---CKLGQIDEAFALLQLFEKEG---YVLGIKGYSSLIDG----LFRAKRYDEVQEWCRK 331
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ I+ D + + +I C+ D AL + L+ + Y ALI +
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGL 391
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALI 435
K + E++K P + TYT LI
Sbjct: 392 LDKARSLQLEISKN-----------------------------DCFPT----SCTYTILI 418
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G D+A +I+ M G PS+ TFN L+ GL K G + +A
Sbjct: 419 CGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D YT ++ F E + + M ++G++ D Y +++ + G +D A
Sbjct: 336 GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKA 395
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ E+ +C+PT +YT + + N + EA ++ +M G P+ T+ L++
Sbjct: 396 RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455
Query: 181 LVRAGKYEEALEIFSKMQEAGVQP 204
L +AG+ EEA +F KM E G P
Sbjct: 456 LCKAGELEEARHLFYKM-EIGKNP 478
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 3/170 (1%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM-KIL 146
V + M + G + Y +M W G + A ++W +K P+ T + +
Sbjct: 510 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW--LKYLRSLPSQEDETLKLAEEH 567
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
F +++A EM + YT+ + L +A + EEAL+IF ++E + +
Sbjct: 568 FEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNP 627
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
+C +LI CK G + I Y E L + + L++ + D+
Sbjct: 628 PSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDK 677
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/492 (19%), Positives = 200/492 (40%), Gaps = 61/492 (12%)
Query: 7 NVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH-- 64
++ K+ YST S + + I + YT+N ++ + +++ F+ +++ H
Sbjct: 77 SITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQP 136
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ T+ T++ +I + ++F+ M +G + VTY ++++ L G A+ +
Sbjct: 137 NIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 196
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M+ C P +V YT+ + L + +V +A +++ EMI +G+ P+ +TY L+ L
Sbjct: 197 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 256
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+++ + ++M + + P+ + +++ CK G
Sbjct: 257 CEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEG------------------------ 292
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
KV + +D + + P ++ N ++ G L +
Sbjct: 293 -------KVMEAHDVVDMMIKRGVEPNVVTYNALMD--------------GHCLRSEMDE 331
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ D+++ K D ST+I C +R + A+ FE + +L Y
Sbjct: 332 AVKVFDTMVC----KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 387
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL--- 421
L+ L + + EM G +L+ L RR A + +
Sbjct: 388 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 447
Query: 422 ---PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P+ Q YT +I AG + A ++ + KG+HP++ T+ +++ GL + G
Sbjct: 448 NMDPDIQ----IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 503
Query: 479 VSDAEIYRKEKK 490
+++A E K
Sbjct: 504 LAEASKLFGEMK 515
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 131/328 (39%), Gaps = 14/328 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D YT+++D + ++++ +F M +GI+ TY S++H L N + +
Sbjct: 207 DVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALL 266
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P +V ++ + L +V EA DV MI+RG+ PN TY LM+
Sbjct: 267 NEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR 326
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+ +EA+++F M G PD + + LI CK + + M L +
Sbjct: 327 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTY 386
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ + H E ++ +FV+ I L+ L K +
Sbjct: 387 STLMHGLCHVGRLQDAIALFH-----EMVTRGQIPDFVSYCI---------LLDYLCKNR 432
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
L +LL I ++ D + + +I+ C + A F L+ Y
Sbjct: 433 RLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYT 492
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+I L + + +++ EM + G+S
Sbjct: 493 IMINGLCQQGLLAEASKLFGEMKRKGYS 520
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 82/171 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D +Y +LD + +R+ + + ++ ++ D YT V+ + AG+++
Sbjct: 411 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 470
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + K +P + +YT + L + EA+ ++ EM ++G PN TY ++
Sbjct: 471 AARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 530
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+R + +++ +M G D + +L+E G +++ IL
Sbjct: 531 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 581
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT ++D A + + + +F + KG++ + TYT +++ L G + A ++ EMK
Sbjct: 456 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K P +Y + N+ + +EM+ RG + T TVL+E L G +
Sbjct: 516 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQ 575
Query: 189 EALEIFSK 196
+I S+
Sbjct: 576 SVKQILSE 583
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 179/448 (39%), Gaps = 32/448 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F W+ + Y M+ + +I + +F MQE DA Y
Sbjct: 135 LQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYN 194
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++H + AG A+NI ++M P+ +Y + K+A ++ K+M +
Sbjct: 195 SLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRN 254
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ T+ +++ +Y +A+ F M+ A + PD NI+I K G+
Sbjct: 255 GVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEA 314
Query: 226 ILILRYMKENRLALRYPV--FKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAV 279
I +L M+E R V + + ++ KV D V P +S N
Sbjct: 315 IELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYN--- 371
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ + D + LLK+ L + D +T++
Sbjct: 372 ALLGAYASRGMHADALGIFKLLKQNGL---------------RPDVVSYTTLLNAYGRSG 416
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ + A AF+ K +Y ALI F + ++ EM K G V +
Sbjct: 417 QPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSIS 476
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQK-----CTATYTALIGVYFSAGSADKALKIYKTM 454
L+ G R+ KI ++L + Y + IG Y + G KAL++Y M
Sbjct: 477 TLLTACGRCRQ---ITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVM 533
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++P T+N+L++GL K+G+ +++
Sbjct: 534 MASNVNPDAVTYNILISGLCKVGKYAES 561
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 171/423 (40%), Gaps = 26/423 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ +L F + S FE+M+ I D T V+H L G A
Sbjct: 255 GVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEA 314
Query: 121 VNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + M+ K +C P +V+YT+ M ++ +V++ V+ M+ G+ PN +Y L+
Sbjct: 315 IELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALL 374
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G + +AL IF +++ G++PD + L+ ++G+ + M++N
Sbjct: 375 GAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCR 434
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ Y +A + + E SLL ++ P D V T
Sbjct: 435 PNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPP-----DVVSIST------------ 477
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ + + + ID++L + I+L+ ++ I + AL + + +
Sbjct: 478 LLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASN 537
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+N + Y LI L K+ + + + E+M L + + LI + A
Sbjct: 538 VNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAE 597
Query: 416 KIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
FS + E C TYTA+I Y GS A ++K M + P + L+
Sbjct: 598 STFSSMKE-SGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEA 656
Query: 473 LEK 475
L +
Sbjct: 657 LNR 659
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 179/459 (38%), Gaps = 72/459 (15%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + +Y +L + + +F+L+++ G+ D V+YT++++ +G +
Sbjct: 360 AEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPE 419
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++EM+ C P IVSY A + KEA + EM + G+PP+ + + L+
Sbjct: 420 KAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLL 479
Query: 179 EYLVRA-----------------------------------GKYEEALEIFSKMQEAGVQ 203
R G Y +ALE+++ M + V
Sbjct: 480 TACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVN 539
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD NILI CK G+ + E+ + LR P+ KE + + L +
Sbjct: 540 PDAVTYNILISGLCKVGKYAESLKFF----EDMVDLRIPLTKEVYSSLICSYVKQGKLTE 595
Query: 264 VHPQFS--------PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
FS P+ ++ +E D + D L
Sbjct: 596 AESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWD------------------LFKE 637
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ ++Q D+ + S+++E + + L E + + L + AY +I L
Sbjct: 638 MEGNTVQPDAIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRD 697
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT----ATY 431
+ +EI+E + + S+ V L+ LG + K+F + C+ +TY
Sbjct: 698 WKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMM--SSCSTVGVSTY 755
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF-NVL 469
T L+ + G K +++ + M G+ P+L + NVL
Sbjct: 756 TVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYMYQNVL 794
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 151/383 (39%), Gaps = 19/383 (4%)
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVS-YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG + AV+++ MK +E Y Y +++ + ++ +A ++ EM + P+
Sbjct: 132 AGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDAD 191
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
Y L+ RAG++ A+ I M A + P + N +I C AG + + + + M
Sbjct: 192 IYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKM 251
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
N + L FK + + + N A + T +I
Sbjct: 252 TRNGVGPDLVTHNIVLSAFKNGSQYSKAI-----AYFEMMKGANIAPDTFTLNI------ 300
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS--TIIEVNCDHRRRDGALLAFEY 350
++ L+K LL+ + +K Q V++ +I+ + + F+
Sbjct: 301 ---VIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDM 357
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
V + +Y AL+G I + + + G V L++ G + +
Sbjct: 358 MVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQ 417
Query: 411 PVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
P A + F + ++ + +Y ALI Y SAG +A+ + M + GI P + + +
Sbjct: 418 PEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSIST 477
Query: 469 LLAGLEKLGRVSDAEIYRKEKKS 491
LL + +++ + + KS
Sbjct: 478 LLTACGRCRQITKIDTILEAAKS 500
>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 913
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 205/491 (41%), Gaps = 61/491 (12%)
Query: 32 DSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDI---FGEAKRISSM 85
DS+ V +L K P A FFN + S GF HD TY ++ I +G K++ S+
Sbjct: 65 DSFKVVDILYNLKNQPI--SALSFFNQLKDS-GFKHDISTYAAIIRILCYWGLHKQLRSI 121
Query: 86 ------------------KYVFELMQEKGINIDAV--------TYTSVMHWLSNAGDVDG 119
+ + + + +++D+ Y +++ + G D
Sbjct: 122 FLDIIYVSCNDNDTPFEISHFLDTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDD 181
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+++ +M + P I M L N ++ A VYK++ + GL PN YTY ++++
Sbjct: 182 AIDVLFQMGRRRFVPHIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIK 241
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L G EEA+ + +M+E+G+ P A IE C + +L+ K + L
Sbjct: 242 ALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPL 301
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-----LSIDQ 294
+ A++ F + L + D E V D+E +
Sbjct: 302 DMYAYTVAVRGF-----CNELKF--------------DKAESVLRDMEKEGMVPDMHCYT 342
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ K NL+ + L+ +M K ++++ ++ +I+ C+ + F +
Sbjct: 343 ALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSL 402
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L L+ +Y ++ L KL + +++EM ++ V LI+ V A
Sbjct: 403 GLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDA 462
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+F + E+ + TY L+ + G A +AL + M + + P+ T+NV++
Sbjct: 463 FKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVES 522
Query: 473 LEKLGRVSDAE 483
L G+V +AE
Sbjct: 523 LCMGGKVKEAE 533
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 182/460 (39%), Gaps = 50/460 (10%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ F N + S+G + ++L E S + F + G+ +D V+Y +V
Sbjct: 356 KAYAFLNEM-MSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNV 414
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L G ++ A+ + +EMK+K+ ++ YT + V +A V++EM + G+
Sbjct: 415 VDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGI 474
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
+ TY VL+ R G EAL + MQ ++P+ N+++E C G+ +
Sbjct: 475 EIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEA 534
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
+ +++ L + + + A A F ++
Sbjct: 535 VFNSIEDKSLDNYFAMINGYCKANHTAGA---------------------AKLFFRLSVK 573
Query: 288 GPL--SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
G + S L+ L ++ + I LL +++ +++ + + C R GA
Sbjct: 574 GHVKRSCCYNLLKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLC---RAGGAA 630
Query: 346 LAFEYSVKMDLNLER------TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ D+ L+R AY +I ++N + ++ +M + G +
Sbjct: 631 GMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFT 690
Query: 400 LLI--HRLGSARRPVPAAK-------IFSLLP--------EDQKCTATYTALIGVYFSAG 442
+L+ H ++ AA IF L E + YT LI Y
Sbjct: 691 VLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVD 750
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
S A+ ++ M +G+ P + T+ LL+G + G V A
Sbjct: 751 SLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRA 790
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M KA F+ + + RG+ D YT M+ + + +F M+++GI D VT+T
Sbjct: 632 MRKAQSVFDMLLK-RGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFT 690
Query: 106 SVM-----------HWLSNAG----DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
++ + +NA D+ A+ IW EMK E P ++ YT + D
Sbjct: 691 VLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVD 750
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ +A V+ EMI+RGL P+ TYT L+ + G + A+ + +M G+ PD
Sbjct: 751 SLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPD 805
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 97/478 (20%), Positives = 186/478 (38%), Gaps = 78/478 (16%)
Query: 9 YKILKYSTWDSAQDLLKNLPIKWDSYTVN-QVLKTHPPMEKAWLFFNWVSRSRGFNHDRF 67
Y++L+ W A N+P+ +YTV + +KA + + G D
Sbjct: 288 YQVLQ--AWKGA-----NIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEK-EGMVPDMH 339
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
YT ++ F +A + M KG+ ++ V S++H L G V+ + +
Sbjct: 340 CYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQF 399
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + VSY + L +++EA + EM + + + YT L+ G
Sbjct: 400 KSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNV 459
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
+A ++F +M+E G++ D ++L+ C+ G + +L YM+ +L ++ Y V
Sbjct: 460 VDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVV 519
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL-LKK 303
E+L E +++ + + S+D +I K
Sbjct: 520 VESLCMGGKVKEAEAVFNSIEDK-----------------------SLDNYFAMINGYCK 556
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
N A + L + + + +++ C+ DG L+ E ++LN+E + +
Sbjct: 557 ANHTAGAAKLFFRLSVKGHVKRSCCYNLLKNLCEEGDNDGILMLLE--TMLNLNVEPSKF 614
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-- 421
+ ++ + +AG + G+ R+ A +F +L
Sbjct: 615 I--------------YGKLFTSLCRAGGAAGM-------------RK---AQSVFDMLLK 644
Query: 422 ----PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
P+ YT +I Y +A+ ++ M ++GI P L TF VLL G K
Sbjct: 645 RGWTPD----LIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHK 698
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
G A + + VF+++ ++G D + YT ++ + AV+++ +MK + P +
Sbjct: 627 GGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDL 686
Query: 137 VSYT--------AYMKILFL-------NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
V++T A++K ++ N+ + +A ++ EM + P+ YTVL++
Sbjct: 687 VTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGY 746
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ +A+ +F +M E G++PD L+ CC+ G+ + +L M
Sbjct: 747 CKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLLDQM 797
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 130/273 (47%), Gaps = 18/273 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
++ TY T+++ + +R ++ M+E+G + Y+S++ L G + AV +W
Sbjct: 313 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 372
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM K C P +V Y A++ L +++ EA D+ +EM+ +G PN +TY+ LM+ +
Sbjct: 373 KEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 432
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
G ++A+ ++ +M ++ + C++L+ C++G R + + +M L + Y
Sbjct: 433 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 492
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ L D+ L +++ Q P+ D VT +I L L
Sbjct: 493 SSMIKGLCDVGSVDKGLKLFYEMQCQ-EPKSRPD-----VVTYNI---------LFNALC 537
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
++ NL LL+ ++D+ DS + +E
Sbjct: 538 RQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET 570
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
N D FTY+T+++ + +R+ ++ + MQ +G + VT+ ++ LS GD+ A
Sbjct: 206 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 265
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ + M LK C P V+Y + L L ++ +A + ++M+ PN TY ++ LV
Sbjct: 266 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 325
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---AL 239
+ + E+ + I M+E G + ++ + LI K G++ + + + M E +
Sbjct: 326 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 385
Query: 240 RYPVFKEALQTFKVADENDSLLWQV 264
Y F + L + DE + +L ++
Sbjct: 386 VYGAFIDGLCRDEKPDEAEDILQEM 410
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 185/452 (40%), Gaps = 28/452 (6%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELM--QEKGI 97
K H P E A FF+ ++ ++ ++L++ + S + K+ + KG
Sbjct: 112 KAHLPGE-AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF 170
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
+ +TY ++ L G +D AV+ + EM LK C P + +Y+ M L RV EA
Sbjct: 171 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 230
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ EM G PN T+ VL++ L + G A ++ M G P++ N LI C
Sbjct: 231 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 290
Query: 218 KAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
G+ + +L M ++ + Y L + A++ +L + +
Sbjct: 291 LKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEER------- 343
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
A E++ + + L +G K +N V L + +K + + V I+
Sbjct: 344 GQKANEYIYSSLISGL-FKEG------KSENAV---RLWKEMAEKGCKPNVVVYGAFIDG 393
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C + D A + + Y +L+ K K + +EM
Sbjct: 394 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN 453
Query: 395 VYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKC-TATYTALIGVYFSAGSADKALKI-Y 451
V ++L++ L + R A +++ +L E K Y+++I GS DK LK+ Y
Sbjct: 454 VVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFY 513
Query: 452 KTMCRK-GIHPSLGTFNVLLAGLEKLGRVSDA 482
+ C++ P + T+N+L L + ++ A
Sbjct: 514 EMQCQEPKSRPDVVTYNILFNALCRQDNLTRA 545
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 3/178 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + Y +D ++ + + + M KG +A TY+S+M GD
Sbjct: 378 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 437
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +W+EM ++ +V + + L + R++EA V+ M+ GL P+ Y+ +++
Sbjct: 438 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 497
Query: 180 YLVRAGKYEEALEIFSKM--QEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYMKE 234
L G ++ L++F +M QE +PD NIL C+ TR I L+ + E
Sbjct: 498 GLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE 555
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 30/238 (12%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A+D+L+ + K +++T + ++K +KA L + + S+ H+ +
Sbjct: 401 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMM-SQDMRHNVVCCSV 459
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L+ E+ R+ V+ M +G+ D V Y+S++ L + G VD + ++ EM+ +E
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 519
Query: 132 --CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL-------- 181
P +V+Y L D + A D+ M+ G P+ T + +E L
Sbjct: 520 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQ 579
Query: 182 ----------VRAGKYEE---ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
VR K E AL I +M + P+ + + +I++ CK R I
Sbjct: 580 DGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 637
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/430 (19%), Positives = 149/430 (34%), Gaps = 55/430 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++ + ++ + V + M+ +G + + + A AVN + M
Sbjct: 67 TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRM 126
Query: 128 KLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI---QRGLPPNCYTYTVLMEYLVR 183
C T+ S+ + + ++ A Y + +G PN TY ++++ L +
Sbjct: 127 ANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCK 186
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
G+ + A++ F +M PD + L+ CK + +L M+ L PV
Sbjct: 187 LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG-CLPNPV 245
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
TF V L+ L K
Sbjct: 246 ------TFNV------------------------------------------LIDALSKN 257
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+L L+ + K + +T+I C + D AL E V + Y
Sbjct: 258 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 317
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+I L+K I+ M + G Y+ + LI L + A +++ + E
Sbjct: 318 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 377
Query: 424 D--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ Y A I D+A I + M KG P+ T++ L+ G K G
Sbjct: 378 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 437
Query: 482 AEIYRKEKKS 491
A + KE S
Sbjct: 438 AILVWKEMMS 447
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ +G D F Y+ M++ + ++ V M + G +A Y ++++ A
Sbjct: 119 IAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGAS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D A+ ++ EM +C PTIV+Y + L +R EA D+ KEM+++G P TY+
Sbjct: 179 KFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L + K E AL++++++ G +PD NILI C G+T+ +++ M
Sbjct: 239 LLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHW 298
Query: 236 RLALRYPVFKEALQTF-KVADENDSL-LWQ--VHPQFSPEFISDN 276
A ++ F K D ++L +W + P+ IS N
Sbjct: 299 NCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYN 343
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 161/393 (40%), Gaps = 62/393 (15%)
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+GD+DGA ++ EM + P V Y A + R+K+ D+++ M ++G N +
Sbjct: 3 SGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNVVS 61
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ ++M L G+ ++A+ I+ M+++G D I+I+ CK G
Sbjct: 62 FNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNG------------- 108
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
++L ++A+ +L DA + + I G
Sbjct: 109 ---------YINKSLHVLEIAEGKGGVL---------------DAFAY-SAMING----- 138
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L K+ L S+L+G++ + ++ V +T+I + D A+ F
Sbjct: 139 ------LCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGS 192
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
MD + Y LI L K F + ++V+EM + G V +LL+ L +
Sbjct: 193 MDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEM 252
Query: 414 AAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A ++++ + P+ Q + LI S G AL +Y M P+L T N
Sbjct: 253 ALQLWNQVLSKGFKPDVQ----MHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHN 308
Query: 468 VLLAGLEKLGRVSDAEIY--RKEKKSIQADALS 498
L+ G K G + +A + R + +Q D +S
Sbjct: 309 TLMEGFYKDGDIRNALVIWARILRSGLQPDIIS 341
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ + +R S + + M EKG +TY+ +M L V+ A+ +W ++
Sbjct: 201 TYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQV 260
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + + + L + + A +Y +M PN T+ LME + G
Sbjct: 261 LSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDI 320
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
AL I++++ +G+QPD + NI ++ C IL L
Sbjct: 321 RNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLH 363
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +N + K ++KA N + +S G + Y T+++ F A + VF M
Sbjct: 133 SAMINGLCK-EAKLDKAVSVLNGMIKS-GCKPNAHVYNTLINGFVGASKFDDAIRVFREM 190
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ VTY ++++ L A ++ +EM K P +++Y+ MK L +V
Sbjct: 191 GSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKV 250
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+ A ++ +++ +G P+ + +L+ L GK + AL ++ M P+ N L
Sbjct: 251 EMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTL 310
Query: 213 IEKCCKAGETRTIILI 228
+E K G+ R ++I
Sbjct: 311 MEGFYKDGDIRNALVI 326
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 36/190 (18%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y ML F RI ++ELM KG + + V++ +M L + G+VD A++IW
Sbjct: 24 DAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNVVSFNIMMRGLFDNGEVDKAISIW 82
Query: 125 EEMKLKE------CYPTIV-----------------------------SYTAYMKILFLN 149
E MK Y I+ +Y+A + L
Sbjct: 83 ELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKE 142
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
++ +A V MI+ G PN + Y L+ V A K+++A+ +F +M P
Sbjct: 143 AKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTY 202
Query: 210 NILIEKCCKA 219
+ LI CK
Sbjct: 203 HTLINGLCKG 212
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I K V+ M E ++ DAV Y +++ G + ++WE M K +V
Sbjct: 2 ESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNVV 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF N V +A +++ M + G + TY ++++ + G ++L +
Sbjct: 61 SFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
+ G D A + +I CK + + +L M ++ V+ + F A +
Sbjct: 121 EGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKF 180
Query: 258 D 258
D
Sbjct: 181 D 181
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/132 (16%), Positives = 61/132 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G+ TY+ ++ + ++ ++ + KG D + ++H L + G
Sbjct: 228 KGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQH 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ +M C P +V++ M+ + + ++ A ++ +++ GL P+ +Y + ++
Sbjct: 288 ALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLK 347
Query: 180 YLVRAGKYEEAL 191
L + A+
Sbjct: 348 GLCSCNRISFAI 359
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 89/162 (54%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
N D Y+T++D + +++ K VF M + G+ D Y+ +++ L VD A+N
Sbjct: 300 NLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALN 359
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++EE+ K P V+YT+ + L + R+ D++ EM+ RG PP+ TY L++ L
Sbjct: 360 LFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALC 419
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+ G + A+ +F+KM++ ++P+ IL++ CK G +
Sbjct: 420 KNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKN 461
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/472 (19%), Positives = 182/472 (38%), Gaps = 84/472 (17%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYT 70
+Y T S ++ ++ D +T+N ++ + L F+ VS+ G+ + T
Sbjct: 73 RYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLN 132
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T++ ++ + + +G + ++Y +++ + G+ A+ + ++
Sbjct: 133 TLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERW 192
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P +V Y+ + L + V EA D+Y EM+ +G+ P+ TY++L+ G+ A
Sbjct: 193 SIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRA 252
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+++ ++M + PD IL++ CK G+ + +L M + + L V+ +
Sbjct: 253 IDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
+ + +E +++ V + T +
Sbjct: 313 YCLVNE----------------VNNAKRVFYTMTQM------------------------ 332
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+ D S +I C +R D AL FE + ++ + Y +LI L
Sbjct: 333 ---------GVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCL 383
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
K V ++ +EM G P D T
Sbjct: 384 CKSGRISYVWDLFDEMLDRGQ------------------------------PPD---VIT 410
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y LI G D+A+ ++ M + I P++ TF +LL GL K+GR+ +A
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNA 462
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FN + + + + +T+T +LD + R+ + F+ + KG ++ TYT
Sbjct: 424 LDRAIALFNKM-KDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYT 482
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L G +D A+ + M+ C V++ ++ F D +A + +EMI R
Sbjct: 483 VMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIAR 542
Query: 166 GL 167
GL
Sbjct: 543 GL 544
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 35/155 (22%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY ++D + + +F M+++ I + T+T ++ L G
Sbjct: 402 RGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVG---- 457
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
R+K A + +++++ +G N TYTV++
Sbjct: 458 -------------------------------RLKNALEFFQDLLTKGYCLNVRTYTVMIN 486
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
L + G +EAL + S+M++ G D I+I
Sbjct: 487 GLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIR 521
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 130/273 (47%), Gaps = 18/273 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
++ TY T+++ + +R ++ M+E+G + Y+S++ L G + AV +W
Sbjct: 337 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 396
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM K C P +V Y A++ L +++ EA D+ +EM+ +G PN +TY+ LM+ +
Sbjct: 397 KEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 456
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
G ++A+ ++ +M ++ + C++L+ C++G R + + +M L + Y
Sbjct: 457 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 516
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ L D+ L +++ Q P+ D VT +I L L
Sbjct: 517 SSMIKGLCDVGSVDKGLKLFYEMQCQ-EPKSRPD-----VVTYNI---------LFNALC 561
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
++ NL LL+ ++D+ DS + +E
Sbjct: 562 RQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET 594
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
N D FTY+T+++ + +R+ ++ + MQ +G + VT+ ++ LS GD+ A
Sbjct: 230 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAK 289
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ + M LK C P V+Y + L L ++ +A + ++M+ PN TY ++ LV
Sbjct: 290 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLV 349
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---AL 239
+ + E+ + I M+E G + ++ + LI K G++ + + + M E +
Sbjct: 350 KQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVV 409
Query: 240 RYPVFKEALQTFKVADENDSLLWQV 264
Y F + L + DE + +L ++
Sbjct: 410 VYGAFIDGLCRDEKPDEAEDILQEM 434
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 185/452 (40%), Gaps = 28/452 (6%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELM--QEKGI 97
K H P E A FF+ ++ ++ ++L++ + S + K+ + KG
Sbjct: 136 KAHLPGE-AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF 194
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
+ +TY ++ L G +D AV+ + EM LK C P + +Y+ M L RV EA
Sbjct: 195 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 254
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ EM G PN T+ VL++ L + G A ++ M G P++ N LI C
Sbjct: 255 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 314
Query: 218 KAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
G+ + +L M ++ + Y L + A++ +L + +
Sbjct: 315 LKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEER------- 367
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
A E++ + + L +G K +N V L + +K + + V I+
Sbjct: 368 GQKANEYIYSSLISGL-FKEG------KSENAV---RLWKEMAEKGCKPNVVVYGAFIDG 417
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C + D A + + Y +L+ K K + +EM
Sbjct: 418 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN 477
Query: 395 VYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKC-TATYTALIGVYFSAGSADKALKI-Y 451
V ++L++ L + R A +++ +L E K Y+++I GS DK LK+ Y
Sbjct: 478 VVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFY 537
Query: 452 KTMCRK-GIHPSLGTFNVLLAGLEKLGRVSDA 482
+ C++ P + T+N+L L + ++ A
Sbjct: 538 EMQCQEPKSRPDVVTYNILFNALCRQDNLTRA 569
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 3/178 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + Y +D ++ + + + M KG +A TY+S+M GD
Sbjct: 402 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 461
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +W+EM ++ +V + + L + R++EA V+ M+ GL P+ Y+ +++
Sbjct: 462 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 521
Query: 180 YLVRAGKYEEALEIFSKM--QEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYMKE 234
L G ++ L++F +M QE +PD NIL C+ TR I L+ + E
Sbjct: 522 GLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE 579
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 30/238 (12%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A+D+L+ + K +++T + ++K +KA L + + S+ H+ +
Sbjct: 425 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM-MSQDMRHNVVCCSV 483
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L+ E+ R+ V+ M +G+ D V Y+S++ L + G VD + ++ EM+ +E
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 543
Query: 132 --CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL-------- 181
P +V+Y L D + A D+ M+ G P+ T + +E L
Sbjct: 544 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQ 603
Query: 182 ----------VRAGKYEE---ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
VR K E AL I +M + P+ + + +I++ CK R I
Sbjct: 604 DGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 661
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/430 (19%), Positives = 149/430 (34%), Gaps = 55/430 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++ + ++ + V + M+ +G + + + A AVN + M
Sbjct: 91 TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRM 150
Query: 128 KLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI---QRGLPPNCYTYTVLMEYLVR 183
C T+ S+ + + ++ A Y + +G PN TY ++++ L +
Sbjct: 151 ANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCK 210
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
G+ + A++ F +M PD + L+ CK + +L M+ L PV
Sbjct: 211 LGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG-CLPNPV 269
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
TF V L+ L K
Sbjct: 270 ------TFNV------------------------------------------LIDALSKN 281
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+L L+ + K + +T+I C + D AL E V + Y
Sbjct: 282 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 341
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+I L+K I+ M + G Y+ + LI L + A +++ + E
Sbjct: 342 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 401
Query: 424 D--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ Y A I D+A I + M KG P+ T++ L+ G K G
Sbjct: 402 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 461
Query: 482 AEIYRKEKKS 491
A + KE S
Sbjct: 462 AILVWKEMMS 471
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 194/492 (39%), Gaps = 74/492 (15%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH---DRFTYTTMLD 74
D A L+ ++P+ D+YT N VLK + K W + N + T+ T +
Sbjct: 175 DDALRLIASMPVAPDTYTYNTVLKGLC-IAKKWEEAEELMAEMIRNRCPPNEVTFATQIR 233
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
F + + + + M G D V Y+++++ S G VD A+++ M C P
Sbjct: 234 SFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKP 290
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
V Y A +K L + +R ++ ++ EM+++G PN T+++L+ L + + A+E+
Sbjct: 291 NTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVL 350
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+M++ G +PD NI+I + G + +L M AL F L+ F A
Sbjct: 351 EQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALG---FNAVLKGFCRA 407
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK----------KK 304
+ W + + D+ + +T +I + GLV +
Sbjct: 408 ER-----WHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTP 462
Query: 305 NLVAIDSLLSGIMDK-----SIQL--------DSAVISTIIEVNCDHRRRDGALLAFEYS 351
++V SLL+G ++ +IQL D + +++ C R + A
Sbjct: 463 DIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEM 522
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
V D + LI L + + E++E+M G + ++
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIF--------------- 567
Query: 412 VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
TY ALI + G D ALK+ TM P ++N L
Sbjct: 568 ------------------TYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLK 606
Query: 472 GLEKLGRVSDAE 483
GL + R DAE
Sbjct: 607 GLCRAERWQDAE 618
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAW-----LFFNWVSRSRGFNHDRFTYTTMLD 74
A L +++P K D ++ N VLK + W L V + N T+ +++
Sbjct: 483 AIQLFRSMPCKPDIFSYNAVLKGLCRAAR-WEDAGELIAEMVGKDCPPNE--VTFNILIN 539
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + V E M G D TY ++++ S G +D A+ + M C P
Sbjct: 540 SLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS---CKP 596
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV--RAG 185
+SY + +K L +R ++A ++ EM++ PN T+ L+ RAG
Sbjct: 597 DAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRAG 649
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 145/394 (36%), Gaps = 77/394 (19%)
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
N TYT L++ R+G+ ++AL + + M V PD N +++ C A + ++
Sbjct: 157 NVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELM 213
Query: 230 RYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEFVT--T 284
M NR F +++F + D LL Q+ P + D V + T
Sbjct: 214 AEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM-----PRYGCTPDVVIYSTLIN 268
Query: 285 DIEGPLSIDQGLVLI--LLKKKNLVAIDSLLSGI----------------MDKSIQLDSA 326
+DQ L L+ +L K N V ++ L G+ + K + A
Sbjct: 269 GFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEA 328
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
S +I C + D A+ E K + Y +I L + ++ M
Sbjct: 329 TFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM 388
Query: 387 TKAGHSLG---VYLGALLIHRLGSA--------RRPVP---------------------A 414
+LG V G R A R P A
Sbjct: 389 VCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYA 448
Query: 415 AKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
++F +P +CT TY++L+ + G + A++++++M P + ++N +L
Sbjct: 449 TQVFEQMPR-YRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLK 504
Query: 472 GLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
GL + R DA + A+ + KD P E
Sbjct: 505 GLCRAARWEDA-------GELIAEMVGKDCPPNE 531
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 179/449 (39%), Gaps = 55/449 (12%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E L + +SR D TY+T+L + +A ++ + + + + +G+ DA+ YT
Sbjct: 63 EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
V+ L + + A+ + EEM C PT++++ + ++ A + ++M G
Sbjct: 123 VVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASG 182
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ + TY LM+ L +AG+ +EA ++ +M+ +G PD A + + CK+G
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG------ 236
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
KV D + L P ++ N ++ +
Sbjct: 237 -------------------------KVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSG 271
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
+ ID L ++ + + + D L+ ST+++ C R A
Sbjct: 272 K----IDTALEMM----EQMASSD---------GCGLNVVGYSTVVDGLCKLGRTQEARS 314
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
E + + Y +L+ L K + E V EM G L+H L
Sbjct: 315 VMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLC 374
Query: 407 SARRPVPAAKIFSLL----PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
S R A ++ + C +TY ALIG AG D ALK ++ M +G
Sbjct: 375 SCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGC 434
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
P +++ ++ GL + GR AE+ E
Sbjct: 435 DPDGVSYSTIVEGLARSGRALQAEMILSE 463
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 179/453 (39%), Gaps = 67/453 (14%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M G ++VT+ ++++ S G + E M ++ P +VSY ++ L +R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 152 VKEATDVYKEMIQRG--LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD---- 205
EA ++ ++MI RG P+ TY+ L+ +AGK EE+ E+ ++ G++PD
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 206 ------------------------KAAC-------NILIEKCCKAGETRTIILILRYMKE 234
+A C N LI CC+ +L+ M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 235 NRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPL 290
+ + + Y + L E + LL ++ +P+ ++ +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS------------- 227
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
V L K ++ +L + D + +TI++ C + D AL E
Sbjct: 228 -----FVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQ 282
Query: 351 SVKMD-LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
D L Y ++ L KL + ++E M +AG V + L++ L A
Sbjct: 283 MASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 410 RPVPAAK-IFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKG-----IHPS 462
+ A + + + E K A TY +L+ S G +A ++ + M G PS
Sbjct: 343 KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPS 402
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
+ T+N L+ GL K GR+ DA + + +S D
Sbjct: 403 VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCD 435
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+++++ +A +I M +G +AVTY S++H L + G + A
Sbjct: 323 GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382
Query: 121 VNIWEEMKLKE-----CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ EEM C P++ +Y A + L R+ +A ++ M +G P+ +Y+
Sbjct: 383 ERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYS 442
Query: 176 VLMEYLVRAGKYEEALEIFSKMQ 198
++E L R+G+ +A I S+++
Sbjct: 443 TIVEGLARSGRALQAEMILSEVR 465
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/492 (19%), Positives = 200/492 (40%), Gaps = 61/492 (12%)
Query: 7 NVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH-- 64
++ K+ YST S + + I + YT+N ++ + +++ F+ +++ H
Sbjct: 68 SITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQP 127
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ T+ T++ +I + ++F+ M +G + VTY ++++ L G A+ +
Sbjct: 128 NIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL 187
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M+ C P +V YT+ + L + +V +A +++ EMI +G+ P+ +TY L+ L
Sbjct: 188 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNL 247
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+++ + ++M + + P+ + +++ CK G
Sbjct: 248 CEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEG------------------------ 283
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
KV + +D + + P ++ N ++ G L +
Sbjct: 284 -------KVMEAHDVVDMMIKRGVEPNVVTYNALMD--------------GHCLRSEMDE 322
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ D+++ K D ST+I C +R + A+ FE + +L Y
Sbjct: 323 AVKVFDTMVC----KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 378
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL--- 421
L+ L + + EM G +L+ L RR A + +
Sbjct: 379 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 438
Query: 422 ---PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P+ Q YT +I AG + A ++ + KG+HP++ T+ +++ GL + G
Sbjct: 439 NMDPDIQ----IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 494
Query: 479 VSDAEIYRKEKK 490
+++A E K
Sbjct: 495 LAEASKLFGEMK 506
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 131/328 (39%), Gaps = 14/328 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D YT+++D + ++++ +F M +GI+ TY S++H L N + +
Sbjct: 198 DVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALL 257
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P +V ++ + L +V EA DV MI+RG+ PN TY LM+
Sbjct: 258 NEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR 317
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+ +EA+++F M G PD + + LI CK + + M L +
Sbjct: 318 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTY 377
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ + H E ++ +FV+ I L+ L K +
Sbjct: 378 STLMHGLCHVGRLQDAIALFH-----EMVTRGQIPDFVSYCI---------LLDYLCKNR 423
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
L +LL I ++ D + + +I+ C + A F L+ Y
Sbjct: 424 RLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYT 483
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+I L + + +++ EM + G+S
Sbjct: 484 IMINGLCQQGLLAEASKLFGEMKRKGYS 511
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 82/171 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D +Y +LD + +R+ + + ++ ++ D YT V+ + AG+++
Sbjct: 402 TRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELE 461
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + K +P + +YT + L + EA+ ++ EM ++G PN TY ++
Sbjct: 462 AARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLIT 521
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+R + +++ +M G D + +L+E G +++ IL
Sbjct: 522 RGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQIL 572
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT ++D A + + + +F + KG++ + TYT +++ L G + A ++ EMK
Sbjct: 447 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 506
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K P +Y + N+ + +EM+ RG + T TVL+E L G +
Sbjct: 507 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQ 566
Query: 189 EALEIFSK 196
+I S+
Sbjct: 567 SVKQILSE 574
>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 369
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ +G D F Y+ M++ + ++ V M + G + Y +++ L A
Sbjct: 119 IAEQKGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGAS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+D A+ ++ EM P IV+Y + LF DR EA D+ KEM+++GL P+ TY+
Sbjct: 179 KLDDAIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L K E AL++++++ + G +PD NILI C G+T+ + + Y+ N
Sbjct: 239 LLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSL--YLDMN 296
Query: 236 R 236
R
Sbjct: 297 R 297
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ +VL + +E+A +++S GF D TY T+++ F + + I+ V E+ ++
Sbjct: 64 TMIRVLFDNGKVEEAMSIRELMAKS-GFVEDSKTYGTLVNGFCKNRYINKSLQVLEIAEQ 122
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
KG +DA Y+++++ L ++ AV + M C P Y A +K L ++ +
Sbjct: 123 KGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKLDD 182
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A V+ EM PP+ TY +L+ L + ++ EA ++ +M E G+ P ++L++
Sbjct: 183 AIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMK 242
Query: 215 KCC 217
C
Sbjct: 243 GLC 245
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 171/412 (41%), Gaps = 56/412 (13%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V+E + E+ ++ DAV Y ++++ AG ++ +WE M +E ++
Sbjct: 2 ESGNIDGAERVYEDIVERKVSPDAVVYNAMLNGFYRAGRIEDCFELWEMMG-REGRRSVA 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ +++LF N +V+EA + + M + G + TY L+ + ++L++
Sbjct: 61 SFNTMIRVLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKNRYINKSLQVLEIA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
++ G D A + +I CK + + +L M ++ V+ ++ A +
Sbjct: 121 EQKGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVYNALIKGLVGASKL 180
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
D + H E + + + VT +I L+ L K L+ ++
Sbjct: 181 DDAIRVFH-----EMGTTHSPPDIVTYNI---------LINGLFKGDRFGEAYDLVKEML 226
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM-DLNLERTAYLALIGILIKLNTF 376
+K LD +VI+ YS+ M L L +AL
Sbjct: 227 EKG--LDPSVIT--------------------YSLLMKGLCLGDKVEMAL---------- 254
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTA 433
++ ++TK G V + +LIH L S + A ++ L C T
Sbjct: 255 ----QLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLY-LDMNRWNCAPNLVTQNT 309
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
L+ ++ G+ AL I+ + R + P + ++N+ L GL R+SDA ++
Sbjct: 310 LMQGFYKDGNIRNALVIWARILRNELQPDIISYNITLKGLCSCNRISDAILF 361
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +N + K +EKA N + +S G + Y ++ A ++ VF M
Sbjct: 133 SAMINALCK-EAKLEKAVCVLNGMIKS-GCKPNTCVYNALIKGLVGASKLDDAIRVFHEM 190
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
D VTY +++ L A ++ +EM K P++++Y+ MK L L D+V
Sbjct: 191 GTTHSPPDIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKV 250
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+ A ++ ++ ++G P+ + +L+ L GK + AL ++ M P+ N L
Sbjct: 251 EMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTL 310
Query: 213 IEKCCKAGETRTIILILRYMKENRL 237
++ K G R ++I + N L
Sbjct: 311 MQGFYKDGNIRNALVIWARILRNEL 335
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W R ++ TM+ + + ++ + ELM + G D+ TY ++++
Sbjct: 48 WEMMGREGRRSVASFNTMIRVLFDNGKVEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKN 107
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
++ ++ + E + K +Y+A + L ++++A V MI+ G PN Y
Sbjct: 108 RYINKSLQVLEIAEQKGGVLDAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTCVY 167
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L++ LV A K ++A+ +F +M PD NILI
Sbjct: 168 NALIKGLVGASKLDDAIRVFHEMGTTHSPPDIVTYNILI 206
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +++ + R + + M EKG++ +TY+ +M L V+ A+ +W
Sbjct: 198 DIVTYNILINGLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQLW 257
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++ K P + + + L + + A +Y +M + PN T LM+ +
Sbjct: 258 NQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMQGFYKD 317
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
G AL I++++ +QPD + NI ++ C IL L
Sbjct: 318 GNIRNALVIWARILRNELQPDIISYNITLKGLCSCNRISDAILFLH 363
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/132 (15%), Positives = 61/132 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY+ ++ ++ ++ + +KG D + ++H L + G
Sbjct: 228 KGLDPSVITYSLLMKGLCLGDKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQL 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ +M C P +V+ M+ + + ++ A ++ +++ L P+ +Y + ++
Sbjct: 288 ALSLYLDMNRWNCAPNLVTQNTLMQGFYKDGNIRNALVIWARILRNELQPDIISYNITLK 347
Query: 180 YLVRAGKYEEAL 191
L + +A+
Sbjct: 348 GLCSCNRISDAI 359
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 197/439 (44%), Gaps = 38/439 (8%)
Query: 57 SRSRGFNHD-RFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLS 112
+R +GF D R + +L + KR +M+ E +++ GI I ++T+V+ L
Sbjct: 144 ARKKGFEIDERSCFEFLLAL----KRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLC 199
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G+V A + +E+ K P++++Y + V ++ M + + N
Sbjct: 200 KKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 259
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TYT+L+E+ R+ K EEA ++F +M + G++PD +I CK G + ++ M
Sbjct: 260 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 319
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
E RL + + A E + V+ S D + V F T ++G
Sbjct: 320 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV--DVNRVIF-NTLMDG--YC 374
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA---LLAFE 349
+G++ L+ +N+ + K ++D+ + I C RR+ A LL E
Sbjct: 375 KKGMIDEALRLQNI---------MQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME 425
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ + ++ LI I K F + + + M K G + V I R
Sbjct: 426 ---ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKG 482
Query: 410 RPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ A K+ + L+P+ T TYT+LI ++G+ D+AL+++ M + G++ ++
Sbjct: 483 KMEEAYKLINEMQERGLMPD----TYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNV 538
Query: 464 GTFNVLLAGLEKLGRVSDA 482
T+ V+++GL K GR +A
Sbjct: 539 VTYTVIISGLSKDGRADEA 557
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 169/423 (39%), Gaps = 57/423 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF TY T+L+ + E K + + + LM++ ++ + TYT ++ W S + ++
Sbjct: 217 KGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEE 276
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++EM K P + YT+ + +K A ++ EM +R L PN YTY L+
Sbjct: 277 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALIN 336
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+AG+ + A + + MQ GV ++ N L++ CK G + + M++
Sbjct: 337 GACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 396
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
A + +E LL + + +P +S SI
Sbjct: 397 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVS---------------FSI--- 438
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI-STIIEVNCDHRRRDGALLAFEYSVKM 354
L+ I K++N L +M+K + S V + IE C + + A +
Sbjct: 439 LIDIYCKEQNFAEARRLFK-VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER 497
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L + Y +LI + E+ EM + G + V
Sbjct: 498 GLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNV------------------- 538
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
TYT +I G AD+A K+Y M ++GI P G ++ L+A L
Sbjct: 539 --------------VTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLH 584
Query: 475 KLG 477
K+G
Sbjct: 585 KVG 587
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G + +R + T++D + + I + +MQ+KG IDA T + +
Sbjct: 355 QSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRR 414
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + M+ + P +VS++ + I EA ++K M ++G P+ TY
Sbjct: 415 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 474
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--- 234
+E + GK EEA ++ ++MQE G+ PD LI+ +G + + M +
Sbjct: 475 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
NR + Y V L ADE ++++ + + E I +D +
Sbjct: 535 NRNVVTYTVIISGLSKDGRADE----AFKLYDEMNKEGIVPDDGI 575
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 86/165 (52%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ + +GF D FT + F + R K + M+E+G+ + V+++ ++
Sbjct: 388 IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQ 447
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A +++ M+ K P++V+Y A+++ +++EA + EM +RGL P+ YTYT
Sbjct: 448 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 507
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L++ +G + ALE+F++M + G+ + ++I K G
Sbjct: 508 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 552
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A++ F+ ++ R + +TY +++ +A + + + + MQ KG++++ V +
Sbjct: 309 MKRAFVLFDEMTERR-LVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 367
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++M G +D A+ + M+ K + ++R +EA + M +R
Sbjct: 368 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEER 427
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN ++++L++ + + EA +F M++ G P N IE+ CK G+
Sbjct: 428 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 487
Query: 226 ILILRYMKENRL 237
++ M+E L
Sbjct: 488 YKLINEMQERGL 499
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ + + ++ + MQE+G+ D TYTS++ +G+VD A+ ++ EM
Sbjct: 470 TYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEM 529
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+V+YT + L + R EA +Y EM + G+ P+ Y+ L+ L + G
Sbjct: 530 PQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589
Query: 188 EEALE 192
LE
Sbjct: 590 VSGLE 594
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME+A+ N + + RG D +TYT+++D + + +F M + G+N + VTYT
Sbjct: 484 MEEAYKLINEM-QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYT 542
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
++ LS G D A +++EM + P
Sbjct: 543 VIISGLSKDGRADEAFKLYDEMNKEGIVP 571
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 98/195 (50%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+R+ G D F+Y++M++ F + R V++ M + G ++ Y ++++
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ A+ I+ EM C PTI++Y + L ++ +EA+ + KEM++RG P+ TY
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ L R K + AL I+ ++ +AG+Q D NILI C AG+ I MKE
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609
Query: 237 LALRYPVFKEALQTF 251
+ + + F
Sbjct: 610 CSPNLVTYNTLMDGF 624
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 177/425 (41%), Gaps = 54/425 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +L + +F ++ +G+ D VTY+++M L+ +D A+++ +EM
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGK 186
V Y A + F ++A V++++++ G PN TY V+++ L + G+
Sbjct: 220 PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGR 279
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++EA E++S+M Q D ILI C++G+ + + M + L L V+
Sbjct: 280 FKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNS 339
Query: 247 ALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
++ F +V ++ + FS + +TT
Sbjct: 340 LIKGFCEVGRTGEAWKFWDSTGFS--------GIRQITT--------------------- 370
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
IM K + LDS ++S E L + + ++ +
Sbjct: 371 --------YNIMTKGL-LDSGMVSEATE------------LLKQLENDASCSPDKVTFGT 409
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
LI L + + EI+E+ +G L V+ + +I+R R A +++ + +D
Sbjct: 410 LIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDG 469
Query: 425 -QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ + Y ALI + + A+KIY M G P++ T+N L+ GL K + +A
Sbjct: 470 CKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEAS 529
Query: 484 IYRKE 488
KE
Sbjct: 530 SLTKE 534
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 171/430 (39%), Gaps = 21/430 (4%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG DR TY+T++ + ++ + + + M G+ DAV Y +++ G
Sbjct: 185 RRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMF 244
Query: 118 DGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A+ +WE++ + P + +Y + L R KEA +V+ M+ + TY +
Sbjct: 245 EKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGI 304
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN- 235
L+ L R+G + A ++S M +AG+ D + N LI+ C+ G T +
Sbjct: 305 LIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSG 364
Query: 236 -RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
R Y + + L + E LL Q+ S D V F T
Sbjct: 365 IRQITTYNIMTKGLLDSGMVSEATELLKQLENDAS----CSPDKVTFGT----------- 409
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ L + +L + +LD S++I C R A ++ VK
Sbjct: 410 -LIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD 468
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
Y ALI +++ +I EMT G + LI L A + A
Sbjct: 469 GCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEA 528
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ + + E + TY +LI D AL+I+ + G+ + N+L+ G
Sbjct: 529 SSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHG 588
Query: 473 LEKLGRVSDA 482
L G+V +A
Sbjct: 589 LCSAGKVDEA 598
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 195/509 (38%), Gaps = 68/509 (13%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNH 64
+ K+ D+A DLL +P ++ D+ N +L EKA + + R G +
Sbjct: 203 LAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASP 262
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ TY MLD + R V+ M D VTY ++H L +GDVD A ++
Sbjct: 263 NLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVY 322
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M + Y + +K R EA + G+ TY ++ + L+ +
Sbjct: 323 SDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGI-RQITTYNIMTKGLLDS 381
Query: 185 GKYEEALEIFSKMQ-EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
G EA E+ +++ +A PDK LI C+ G IL + + L
Sbjct: 382 GMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFS 441
Query: 244 FKEALQTF----KVADENDSLLWQVHPQFSPE------FISD-------NDAVEF---VT 283
+ + F + D N+ V P I+ NDA++ +T
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMT 501
Query: 284 TDIEGPLSID-QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
++ P I L+ L K + SL ++++ + D +++I C ++ D
Sbjct: 502 SNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
AL I +E+ AG + V + +LI
Sbjct: 562 VAL-----------------------------------RIWDEILDAGLQVDVMVHNILI 586
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
H L SA + V A L +++ C+ TY L+ ++ GS DKA ++ + G+
Sbjct: 587 HGLCSAGK-VDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGL 645
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
P + T+N + GL R + + E
Sbjct: 646 KPDIVTYNTRIKGLCSCNRTPEGVLLLNE 674
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF D TY +++ K++ +++ + + G+ +D + + ++H L +AG VD
Sbjct: 538 RGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDE 597
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A I+ EMK K C P +V+Y M + + +A ++ ++ GL P+ TY ++
Sbjct: 598 AFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIK 657
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L + E + + +++ G+ P +IL+ K G
Sbjct: 658 GLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 195/476 (40%), Gaps = 35/476 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL---MQEKGINIDAV 102
+E A F + RSR + + G R+ + V L M+ + + +A
Sbjct: 59 LEDAIDLFGDMVRSRPLP----SVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAY 114
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
++T +M + + A++ + ++ +PT+V+++ + L + DR+ EA D++ +M
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ PN T+T LM L R G+ EA+ + +M E G+QP++ +++ CK G+T
Sbjct: 175 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230
Query: 223 RTIILILRYMKE-NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+ + +LR M+E + + ++ +T + S W Q E +
Sbjct: 231 VSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPD 290
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
V T L+ +K+ + L ++ + I + S++I+ C R
Sbjct: 291 VVT--------YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL 342
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D A F + + + LI + +++ EMT+AG L
Sbjct: 343 DAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 402
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCR--- 456
IH A + + C T L+ G AL+++K M +
Sbjct: 403 IHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 462
Query: 457 --------KGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALSKDAV 502
G+ P + T+N+L++GL G+ +AE +E + I D ++ ++V
Sbjct: 463 DIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSV 518
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 178/435 (40%), Gaps = 34/435 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+TT+++ R+ + + M E G+ + +TY +++ + GD A+N+ +M
Sbjct: 181 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 240
Query: 128 K-LKECYPTIVSYTAYMKILFLND-----RVKEATDVYKEMIQRG-LPPNCYTYTVLMEY 180
+ + P +V + + +N R EA + +EM++R + P+ TY L+
Sbjct: 241 EEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINA 300
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
V+ GK+ EA E++ +M G+ P + +I+ CK + M +
Sbjct: 301 FVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPD 360
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
F + + A D + +H +++ TT I G
Sbjct: 361 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITY---TTLIHG-----------F 406
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+ +L A LL ++ + + +T+++ CD+ + AL F+ K ++++
Sbjct: 407 CQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 466
Query: 361 T-----------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ Y LI LI F + E+ EEM G +IH L
Sbjct: 467 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQS 526
Query: 410 RPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
R A ++F + T+T LI Y AG D L+++ M R+GI + T+
Sbjct: 527 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 586
Query: 468 VLLAGLEKLGRVSDA 482
L+ G K+G ++ A
Sbjct: 587 TLIHGFRKVGNINGA 601
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 148/393 (37%), Gaps = 70/393 (17%)
Query: 17 WDSAQDLLKNL----PIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
W AQ LL+ + I D T +N +K E L+ + R G T
Sbjct: 271 WSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR--GIIPSTIT 328
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y++M+D F + R+ + +++F LM KG + D +T+ +++ A VD + + EM
Sbjct: 329 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 388
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++YT + + A D+ +EM+ G+ PN T L++ L GK +
Sbjct: 389 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLK 448
Query: 189 EALEIFSKMQEA-----------GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ALE+F MQ++ GV+PD NILI G ++++ L
Sbjct: 449 DALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG---------KFLEAEEL 499
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
P H P+ I+ N S+ GL
Sbjct: 500 YEEMP----------------------HRGIVPDTITYN--------------SVIHGLC 523
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K+ L + + KS + +T+I C R D L F + +
Sbjct: 524 ----KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIV 579
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
Y+ LI K+ +I +EM +G
Sbjct: 580 ANAITYITLIHGFRKVGNINGALDIFQEMMASG 612
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/473 (19%), Positives = 172/473 (36%), Gaps = 72/473 (15%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
M DT+S + + K + + P++ + +N + E L + R +
Sbjct: 227 MGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKK 286
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
+ D TY +++ F + + + +++ M +GI +TY+S++ +D A
Sbjct: 287 -ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAA 345
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ M K C P I+++ + RV + + EM + GL N TYT L+
Sbjct: 346 EHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 405
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G A ++ +M +GV P+ CN L++ C G+
Sbjct: 406 FCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK------------------- 446
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
K+AL+ FK ++ + HP +E + L+ L
Sbjct: 447 ---LKDALEMFKAMQKSKMDIDASHP----------------FNGVEPDVQTYNILISGL 487
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+ + + + L + + I D+ +++I C R D A F+ +
Sbjct: 488 INEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNV 547
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+ LI K E+ EM RR + A I
Sbjct: 548 VTFTTLINGYCKAGRVDDGLELFCEM---------------------GRRGIVANAI--- 583
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
TY LI + G+ + AL I++ M G++P T +L GL
Sbjct: 584 ---------TYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Query: 20 AQDLLKNLP---IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A++L + +P I D+ T N V L +++A F+ + S+ F+ + T+TT++
Sbjct: 496 AEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMG-SKSFSPNVVTFTTLI 554
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ + +A R+ +F M +GI +A+TY +++H G+++GA++I++EM Y
Sbjct: 555 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEM 162
P ++ + L+ + +K A + +++
Sbjct: 615 PDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/408 (19%), Positives = 156/408 (38%), Gaps = 32/408 (7%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E G +++ S H + D A++++ +M P+++ + M ++ R+
Sbjct: 39 ESGFGGESLKLRSGFHEIKGLED---AIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLD 95
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
++++M R +P N Y++T+LM+ K AL F K+ + G P + L+
Sbjct: 96 VVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLL 155
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
C + + M + + + + +V + L + P I
Sbjct: 156 HGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQI 215
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI----- 328
+ T ++G + K + V+ +LL + + S + VI
Sbjct: 216 T-------YGTIVDG-----------MCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLER 257
Query: 329 -STIIEVNCDHRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+ +I C R + L E + ++ + Y ALI +K F + E+ +EM
Sbjct: 258 RTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEM 317
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGS 443
G + +I R A +F L+ + C+ T+ LI Y A
Sbjct: 318 LPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPDIITFNTLIAGYCRAKR 376
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
D +K+ M G+ + T+ L+ G ++G ++ A+ +E S
Sbjct: 377 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVS 424
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 64/139 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY +++ + R+ +F+ M K + + VT+T++++ AG VD
Sbjct: 506 RGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 565
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y + + A D+++EM+ G+ P+ T ++
Sbjct: 566 GLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLT 625
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + + A+ + +Q
Sbjct: 626 GLWSKEELKRAVAMLEDLQ 644
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 109/218 (50%), Gaps = 2/218 (0%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ + YST S + +L I D YT+ V+ + + + F+ +++ H
Sbjct: 81 LTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGH 140
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I ++F+ M +G + VTY +++H L G+ A+
Sbjct: 141 QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIR 200
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M K C P +++Y + LF + +V EA +++ EMI +G+ PN TY ++ L
Sbjct: 201 LLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLC 260
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ +++ + ++M ++ + P+ L++ CK G
Sbjct: 261 KFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEG 298
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 185/448 (41%), Gaps = 27/448 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D +T +++ F R+ V + + G D T+T+++ L G +
Sbjct: 102 SLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIG 161
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A++++++M + P V+Y + L + A + + M+Q+ PN TY ++
Sbjct: 162 EALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTII 221
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L + + EAL IFS+M G+ P+ + N +I CK E + + ++ M ++++
Sbjct: 222 DCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIM 281
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+F + D+L + + + + D V D+ ++ G L
Sbjct: 282 PNVVIFTTLV---------DALCKEGMVTIAHDVV-DVMIQRGVEPDVVTYTALMDGHCL 331
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ + D + ++ K + ST+I C +R D A+ FE + +L
Sbjct: 332 ----RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVP 387
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y LI L + + EM +G + +L+ L R A +
Sbjct: 388 NIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAML 447
Query: 419 ------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+L P+ Q +Y +I G + A ++ ++ KG+HP + T+ +++ G
Sbjct: 448 KAIEGSNLAPDIQ----SYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMING 503
Query: 473 LEKLGRVSDAEIYRKEKKSIQADALSKD 500
L G +++A K + + D S D
Sbjct: 504 LCLQGLLAEAT---KLFREMNTDGCSPD 528
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++ ++ D T ++ H M++A F+ + R +G + +Y+T+++ + +
Sbjct: 308 DVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR-KGCAPNVISYSTLINGYCK 366
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+RI Y+FE M ++ + + VTY +++H L + G + A+ ++ EM P +V+
Sbjct: 367 IQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVT 426
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y + L + +A + K + L P+ +Y ++++ + R G+ E A ++FS +
Sbjct: 427 YRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLS 486
Query: 199 EAGVQPDKAACNILIEKCCKAG 220
G+ PD I+I C G
Sbjct: 487 SKGLHPDVWTYTIMINGLCLQG 508
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 153/411 (37%), Gaps = 94/411 (22%)
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
N +D A++ + M + P++V + + + + K+M G+P + Y
Sbjct: 51 NFNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVY 110
Query: 173 -----------------------------------TYTVLMEYLVRAGKYEEALEIFSKM 197
T+T L+ L GK EAL +F KM
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVA 254
G QP+ LI CK G +R I +LR M + + Y + L FK
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCL--FKDR 228
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
N++L N E + I +S ++ L K + +L++
Sbjct: 229 QVNEAL---------------NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMN 273
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++D I + + +T+++ C ++G + T ++ ++I+
Sbjct: 274 EMVDSKIMPNVVIFTTLVDALC----KEGMV---------------TIAHDVVDVMIQRG 314
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TY 431
P V M GH L + A K+F + + C +Y
Sbjct: 315 VEPDVVTYTALMD--GHCLRSEMDE--------------ADKVFDTMVR-KGCAPNVISY 357
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ LI Y DKA+ +++ MC++ + P++ T+N L+ GL +GR+ DA
Sbjct: 358 STLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDA 408
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 77/166 (46%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +LD + + + + + ++ + D +Y V+ + G+++ A +++
Sbjct: 423 DLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLF 482
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ K +P + +YT + L L + EAT +++EM G P+ TY ++ +R
Sbjct: 483 SSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRN 542
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
+ A+++ +M G D + +++E G +++ IL
Sbjct: 543 NETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILH 588
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 167/398 (41%), Gaps = 54/398 (13%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D V+YT+V++ GD A + + EM + P +V+Y++ + L + +A +V
Sbjct: 195 DVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
M++ G+ PNC TYT +M +G+ +EA+ K++ GV+PD +I
Sbjct: 255 TSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDI-------- 306
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
L+ Y + L V AL V + +HP D+
Sbjct: 307 --ATYCTLLQGYATKGAL-----VGMHALLDLMVRN-------GIHP--------DHYVY 344
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ +D+ +++ ++ + D++ G AVI + C
Sbjct: 345 NILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYG----------AVIGIL----CKSG 390
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
R + A+L FE + L+ Y +LI L N + + E++ EM G L
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 450
Query: 400 LLIHRLGSARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
+I R + + K+F L+ P+ TY+ LI Y AG D+A+K+
Sbjct: 451 SIIDSHCKEGRVIESEKLFDLMVRIGVKPD----IITYSTLIDGYCLAGKMDEAMKLLSG 506
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
M G+ P+ T+ L+ G K+ R+ DA + KE +S
Sbjct: 507 MVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMES 544
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/471 (19%), Positives = 183/471 (38%), Gaps = 60/471 (12%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
R G D +YTT+++ F + + M ++ I+ D VTY+S++ L
Sbjct: 187 GRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA 246
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE--------------- 161
+D A+ + M P +YT+ M + + KEA K+
Sbjct: 247 MDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDI 306
Query: 162 -------------------------MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
M++ G+ P+ Y Y +L+ + GK +EA+ +FSK
Sbjct: 307 ATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
M++ G+ PD +I CK+G +L M + L+ V+ + ++
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426
Query: 257 NDSLLWQVHPQFSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
W+ + E + + F + I+ K+ ++ + L
Sbjct: 427 -----WERAEELILEMLDRGICLNTIFFNSIIDSH-----------CKEGRVIESEKLFD 470
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++ ++ D ST+I+ C + D A+ V + L Y LI K++
Sbjct: 471 LMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKIS 530
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYT 432
+ +EM +G S + +++ L RR A +++ + E Q +TY
Sbjct: 531 RMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 590
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++ D AL++++ +C + TFN+++ L K+GR +A+
Sbjct: 591 IILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAK 641
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 7/226 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M A + F + S G + D TY +L + +R ++ K ++ + E G I+ TY
Sbjct: 532 MGDALVLFKEM-ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 590
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++H L D A+ +++ + L + ++ + L R EA D++
Sbjct: 591 IILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSN 650
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN +TY ++ E ++ G EE ++F M++ G D N ++ + + GE
Sbjct: 651 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 710
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L + E +L EA D +Q + +F PE
Sbjct: 711 GTYLSMIDEKHFSL------EASTASLFIDLLSGGKYQEYHRFLPE 750
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 145/342 (42%), Gaps = 35/342 (10%)
Query: 6 SNVYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPMEK---AWLFFNWVSRS 59
S ++ + + W+ A++L+ + I ++ N ++ +H + + F+ + R
Sbjct: 416 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 475
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G D TY+T++D + A ++ + M G+ + VTY ++++ +
Sbjct: 476 -GVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGD 534
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++EM+ P I++Y ++ LF R A ++Y + + G TY +++
Sbjct: 535 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 594
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + ++AL +F + ++ + NI+I+ K G + N L
Sbjct: 595 GLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVP 654
Query: 240 RYPVFKEALQTFKVADEN---DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
Y T+++ EN LL ++ F + DN ++D G+
Sbjct: 655 NY-------WTYRLMAENIIGQGLLEELDQLFLS--MEDNGC------------TVDSGM 693
Query: 297 ----VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
V LL++ + + LS I +K L+++ S I++
Sbjct: 694 LNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDL 735
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 176/420 (41%), Gaps = 25/420 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++D +A+ + VF+ M + G+ + TY ++H + G V + E+M
Sbjct: 209 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKM 268
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +Y + + L + D+ M++ GL P+ + + + + G
Sbjct: 269 SARGLKPDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKCGMI 325
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
++A++IF+KM++ G+ P+ LI+ CK G + M + VF
Sbjct: 326 DKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSL 385
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDN---DAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ D+ W+ + E + +AV F T L+ L
Sbjct: 386 VYGLCTVDK-----WERAEELVYEMLDQGICPNAVFFNT------------LICNLCNVG 428
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
++ L+ + ++ D+ + +I C R D A F+ V + L+ Y
Sbjct: 429 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYN 488
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPE 423
L+ + + EM + G + GV ++H L +R A +++ +++
Sbjct: 489 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 548
Query: 424 DQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KC TY ++ + D+A K+++++C KG+ ++ TF +++ L K GR DA
Sbjct: 549 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 608
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D F+YT ++ + A R + VF+ M G++ VTY +++H +A +D A
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM K P +V+Y + LF R EA ++Y MI G + YTY +++
Sbjct: 504 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 563
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--- 237
L ++ +EA ++F + G+Q + I+I K G + + + N L
Sbjct: 564 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 623
Query: 238 ALRYPVFKEALQTFKVADENDSLL 261
+ Y + E L +E DSL
Sbjct: 624 VVTYRLVAENLIEEGSLEEFDSLF 647
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 177/432 (40%), Gaps = 58/432 (13%)
Query: 78 EAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM---KLKECY 133
+ KR+ +M + + M E G D V+Y+ ++ N + A+ + M + C
Sbjct: 145 DGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCP 204
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P +V+YT + L A V+++MI G+ PN TY L+ + GK++E +++
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQM 264
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK---EALQT 250
KM G++PD L+ C E + L M EN L+ + +F A
Sbjct: 265 LEKMSARGLKPDCYTYGSLLNYLCALSEMHSF---LDLMVENGLSPDHHIFNIFFSAYAK 321
Query: 251 FKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVT-------TDIEGPLSIDQGLVLILLK 302
+ D+ + ++ SP ++ ++ + +++ I++G+
Sbjct: 322 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT----- 376
Query: 303 KKNLVAIDSLLSGI--MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
N+V +SL+ G+ +DK + + V + + C +
Sbjct: 377 -PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNA--------------------- 414
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-- 418
+ LI L + + +++ M G + LI A R A K+F
Sbjct: 415 VFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDG 474
Query: 419 ----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
L P + TY L+ Y SA D A +++ M RKG+ P + T+N +L GL
Sbjct: 475 MVSIGLSPTE----VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 530
Query: 475 KLGRVSDA-EIY 485
+ R S+A E+Y
Sbjct: 531 QTKRFSEAKELY 542
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 163/428 (38%), Gaps = 60/428 (14%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D +TY ++L+ +S M +LM E G++ D + + G +D
Sbjct: 270 ARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 326
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A++I+ +M+ P +V+Y A + L RV +A + +MI G+ PN + L+
Sbjct: 327 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKEN 235
L K+E A E+ +M + G+ P+ N LI C G E R +I ++ ++
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 446
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
A Y DE + + G
Sbjct: 447 PDAFSYTPLISGYCLAGRTDEAEKVF--------------------------------DG 474
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+V I L V ++LL G C R D A F ++
Sbjct: 475 MVSIGLSPTE-VTYNTLLHGY-------------------CSASRIDDAYCLFREMLRKG 514
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y ++ L + F + E+ M +G +Y ++++ L + A
Sbjct: 515 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 574
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
K+F L Q T+T +IG G + A+ ++ + G+ P++ T+ ++ L
Sbjct: 575 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 634
Query: 474 EKLGRVSD 481
+ G + +
Sbjct: 635 IEEGSLEE 642
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 7/226 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A+ F + R +G TY T+L + KR S K ++ M G D TY
Sbjct: 500 IDDAYCLFREMLR-KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 558
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L + VD A +++ + K I+++T + L R ++A D++ +
Sbjct: 559 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 618
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN TY ++ E L+ G EE +FS M++ G P+ N L+ + G+
Sbjct: 619 GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 678
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L + E ++ + F +DE +Q H + PE
Sbjct: 679 GAYLSKLDERNFSVEASTTSLLISIF-TSDE-----YQHHAKSLPE 718
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 8 VYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++ L W +L+ + +K D YT +L + + F + + + G +
Sbjct: 249 IHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVEN-GLSP 307
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D + + + I +F M++ G++ + V Y +++ L G VD A +
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKF 367
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M + P IV + + + L D+ + A ++ EM+ +G+ PN + L+ L
Sbjct: 368 NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 427
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
G+ E + M+ GV+PD + LI C AG T
Sbjct: 428 GRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRT 465
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FN + R G + + Y ++D + R+ + F M +G+ + V +
Sbjct: 325 IDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 383
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+++ L + A + EM + P V + + L RV E + M
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ ++YT L+ AG+ +EA ++F M G+ P + N L+ C A
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503
Query: 226 ILILRYM 232
+ R M
Sbjct: 504 YCLFREM 510
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 130/325 (40%), Gaps = 60/325 (18%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC---KAGETR 223
+ PN TY++L+ L R G+ + + F + + G + + N L++ C + GE
Sbjct: 94 VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
++L R P ++ D++ + + F ++N A E
Sbjct: 154 DVLL-----------QRMP---------ELGCTPDTVSYSI---LLKGFCNENRAEE--- 187
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
L LL+ +++ +S + +T+I+ C + D
Sbjct: 188 -------------ALELLR---------MMANDHGRSCPPNVVTYTTVIDGLCKAQLFDR 225
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A F+ + + Y LI + + + +V +++E+M+ G Y L++
Sbjct: 226 AEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLN 285
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSA----GSADKALKIYKTMCRKGI 459
L + L+ E+ + + ++FSA G DKA+ I+ M + G+
Sbjct: 286 YLCALSE---MHSFLDLMVENGLSPDHH--IFNIFFSAYAKCGMIDKAMDIFNKMRQHGL 340
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEI 484
P++ + L+ L KLGRV DAE+
Sbjct: 341 SPNVVNYGALIDALCKLGRVDDAEV 365
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 110/218 (50%), Gaps = 2/218 (0%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
++++ ++ YST S + + I ++YT+N ++ + + + F+ + G+
Sbjct: 61 LTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGY 120
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
T+TT++ +I +F+ M +G D +TY ++++ L G+ A+
Sbjct: 121 QPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIR 180
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
M+ + C PT+V Y+ + L + ++ EA ++ +M+ +G+ PN +TY+ L+ L
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLC 240
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G ++EA+ +F M + PD+ N L++ CK G
Sbjct: 241 ILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEG 278
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 4/202 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++ +K D T N ++ H M K F+ + R +G +YTT+++ + +
Sbjct: 288 DVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVR-KGCVPSVISYTTLINGYCK 346
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+ + +FE M ++G+ D VTY +++H L + G + A+ ++ EM + P +V+
Sbjct: 347 IQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 406
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y L N R+ EA + K + L P+ + Y+++M+ + RAG+ E A ++FSK+
Sbjct: 407 YRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLS 466
Query: 199 EAGVQPDKAACNILIEKCCKAG 220
G+ PD I+I C+ G
Sbjct: 467 SKGLHPDVRTYTIMINGLCQQG 488
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E LF+ + R D+ T+ T++D + + YV ++M + + D VTY S
Sbjct: 247 EAIRLFYAMIHRK--IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNS 304
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEM 162
+M ++ VN+++ M K C P+++SYT Y KI ++ +A +++EM
Sbjct: 305 LMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD----KAMGLFEEM 360
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
Q+GL P+ TY L+ L G+ +A+ +F +M G PD IL + CK
Sbjct: 361 SQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRL 420
Query: 223 RTIILILRYMKENRL 237
+++L+ ++ L
Sbjct: 421 AEAMVLLKVIEGTNL 435
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 150/408 (36%), Gaps = 88/408 (21%)
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV---YKEMIQRGLPP 169
N +D A++++ M P+IV ++ K+L R+K + V YK+M G+P
Sbjct: 31 NVNTIDDALSLFNRMLRMRPPPSIVDFS---KLLTSITRMKHYSTVLSLYKQMDSFGIPH 87
Query: 170 NCY-----------------------------------TYTVLMEYLVRAGKYEEALEIF 194
N Y T+T L+ L GK EAL++F
Sbjct: 88 NTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF 147
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
KM G QPD LI CK G T T I LR M++ V+ + +
Sbjct: 148 DKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLC-- 205
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
D L + FS F + S+ GL ++ K+ + L
Sbjct: 206 --KDRQLTEALSLFSDMLAKGISPNNFTYS------SLIHGLCILGHWKEAI----RLFY 253
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++ + I D +T+++ C A + ++ DL + Y +L+ +
Sbjct: 254 AMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRS 313
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTAL 434
K + + M + G VP+ +YT L
Sbjct: 314 EMGKTVNVFDTMVRKG--------------------CVPSV-------------ISYTTL 340
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I Y DKA+ +++ M ++G+ P T+N L+ GL +GR+ DA
Sbjct: 341 INGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 179/450 (39%), Gaps = 62/450 (13%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G H+ +T +++ F R+ V + + G T+T+++ L G +
Sbjct: 82 SFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIG 141
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++++M + P +++Y + L A + M QR P Y+ ++
Sbjct: 142 EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTII 201
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L + + EAL +FS M G+ P+ + LI C G
Sbjct: 202 DSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH----------------- 244
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+KEA++ F +H + P+ ++ N V+ + EG + +V
Sbjct: 245 -----WKEAIRLFYA---------MIHRKIMPDQLTFNTLVDALCK--EGMVVKAHYVVD 288
Query: 299 ILLK---KKNLVAIDSLLSGI-----MDKSIQLDSAVI-----------STIIEVNCDHR 339
++++ K ++V +SL+ G M K++ + ++ +T+I C +
Sbjct: 289 VMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQ 348
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
D A+ FE + L + Y LI L + + EM G +
Sbjct: 349 IMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYR 408
Query: 400 LLI------HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
+L HRL A + + +L P+ Y+ ++ AG + A ++
Sbjct: 409 ILFDYLCKNHRLAEAMVLLKVIEGTNLDPD----IHIYSIVMDGMCRAGELEAARDLFSK 464
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ KG+HP + T+ +++ GL + G +++A
Sbjct: 465 LSSKGLHPDVRTYTIMINGLCQQGLLAEAS 494
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 136/352 (38%), Gaps = 24/352 (6%)
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+R+ A V ++++ G P+ T+T L+ L GK EAL++F KM G QPD
Sbjct: 103 NRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTY 162
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
LI CK G T T I LR M++ V+ + + D L + FS
Sbjct: 163 GTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLC----KDRQLTEALSLFS 218
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
F + S+ GL ++ K+ + L ++ + I D +
Sbjct: 219 DMLAKGISPNNFTYS------SLIHGLCILGHWKEAI----RLFYAMIHRKIMPDQLTFN 268
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
T+++ C A + ++ DL + Y +L+ + K + + M +
Sbjct: 269 TLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGS 443
G V LI+ + A +F L+P+ T TY LI G
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPD----TVTYNTLIHGLCHVGR 384
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
A+ ++ M G P L T+ +L L K R+++A + K + D
Sbjct: 385 LRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLD 436
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 81/165 (49%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY + D + R++ + ++++ ++ D Y+ VM + AG+++ A +++
Sbjct: 403 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF 462
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++ K +P + +YT + L + EA+ ++ EM + G PN TY ++ +R
Sbjct: 463 SKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRN 522
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ A+++F +M G D + +L+E G +++ IL
Sbjct: 523 NETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQIL 567
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 197/439 (44%), Gaps = 38/439 (8%)
Query: 57 SRSRGFNHD-RFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLS 112
+R +GF D R + +L + KR +M+ E +++ GI I ++T+V+ L
Sbjct: 148 ARKKGFEIDERSCFEFLLAL----KRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLC 203
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G+V A + +E+ K P++++Y + V ++ M + + N
Sbjct: 204 KKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVT 263
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TYT+L+E+ R+ K EEA ++F +M + G++PD +I CK G + ++ M
Sbjct: 264 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 323
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
E RL + + A E + V+ S D + V F T ++G
Sbjct: 324 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGV--DVNRVIF-NTLMDG--YC 378
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA---LLAFE 349
+G++ L+ +N+ + K ++D+ + I C RR+ A LL E
Sbjct: 379 KKGMIDEALRLQNI---------MQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME 429
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ + ++ LI I K F + + + M K G + V I R
Sbjct: 430 ---ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKG 486
Query: 410 RPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ A K+ + L+P+ T TYT+LI ++G+ D+AL+++ M + G++ ++
Sbjct: 487 KMEEAYKLINEMQERGLMPD----TYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNV 542
Query: 464 GTFNVLLAGLEKLGRVSDA 482
T+ V+++GL K GR +A
Sbjct: 543 VTYTVIISGLSKDGRADEA 561
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 169/423 (39%), Gaps = 57/423 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF TY T+L+ + E K + + + LM++ ++ + TYT ++ W S + ++
Sbjct: 221 KGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEE 280
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++EM K P + YT+ + +K A ++ EM +R L PN YTY L+
Sbjct: 281 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALIN 340
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+AG+ + A + + MQ GV ++ N L++ CK G + + M++
Sbjct: 341 GACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 400
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
A + +E LL + + +P +S SI
Sbjct: 401 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVS---------------FSI--- 442
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI-STIIEVNCDHRRRDGALLAFEYSVKM 354
L+ I K++N L +M+K + S V + IE C + + A +
Sbjct: 443 LIDIYCKEQNFAEARRLFK-VMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER 501
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L + Y +LI + E+ EM + G + V
Sbjct: 502 GLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNV------------------- 542
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
TYT +I G AD+A K+Y M ++GI P G ++ L+A L
Sbjct: 543 --------------VTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLH 588
Query: 475 KLG 477
K+G
Sbjct: 589 KVG 591
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G + +R + T++D + + I + +MQ+KG IDA T + +
Sbjct: 359 QSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRR 418
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + M+ + P +VS++ + I EA ++K M ++G P+ TY
Sbjct: 419 EEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAF 478
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--- 234
+E + GK EEA ++ ++MQE G+ PD LI+ +G + + M +
Sbjct: 479 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 538
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
NR + Y V L ADE ++++ + + E I +D +
Sbjct: 539 NRNVVTYTVIISGLSKDGRADE----AFKLYDEMNKEGIVPDDGI 579
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 86/165 (52%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ + +GF D FT + F + R K + M+E+G+ + V+++ ++
Sbjct: 392 IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQ 451
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A +++ M+ K P++V+Y A+++ +++EA + EM +RGL P+ YTYT
Sbjct: 452 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 511
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L++ +G + ALE+F++M + G+ + ++I K G
Sbjct: 512 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 556
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A++ F+ ++ R + +TY +++ +A + + + + MQ KG++++ V +
Sbjct: 313 MKRAFVLFDEMTERR-LVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 371
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++M G +D A+ + M+ K + ++R +EA + M +R
Sbjct: 372 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEER 431
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN ++++L++ + + EA +F M++ G P N IE+ CK G+
Sbjct: 432 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 491
Query: 226 ILILRYMKENRL 237
++ M+E L
Sbjct: 492 YKLINEMQERGL 503
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ + + ++ + MQE+G+ D TYTS++ +G+VD A+ ++ EM
Sbjct: 474 TYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEM 533
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+V+YT + L + R EA +Y EM + G+ P+ Y+ L+ L + G
Sbjct: 534 PQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593
Query: 188 EEALE 192
LE
Sbjct: 594 VSGLE 598
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME+A+ N + + RG D +TYT+++D + + +F M + G+N + VTYT
Sbjct: 488 MEEAYKLINEM-QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYT 546
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
++ LS G D A +++EM + P
Sbjct: 547 VIISGLSKDGRADEAFKLYDEMNKEGIVP 575
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 199/462 (43%), Gaps = 24/462 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNH-DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
+++A + RS G D F+Y ++ + + S VF+ M ++G+ + +TY
Sbjct: 174 LDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITY 233
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+++ GD++ + ++M P +V+Y + L R+ E + EM
Sbjct: 234 NTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTS 293
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+ P+ +TY++L + L R G L +F + + GV C+IL+ CK G+
Sbjct: 294 YSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAK 353
Query: 225 IILILRYMKENRLALRYPVFKEALQTF-KVADEND--SLLWQVHPQ-FSPEFISDNDAV- 279
+L + L ++ + + +V D S+ Q+ + P+ I+ N +
Sbjct: 354 AEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALIN 413
Query: 280 -----EFVT-----------TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
E +T + ++ + L+ + L ++LS + DK I+
Sbjct: 414 GLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
+ ++++ C + + A+ + + D+ Y ++I I+ + +V
Sbjct: 474 NVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLV 533
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK-IFSLLPEDQKC-TATYTALIGVYFSA 441
E+M +G S ++ LL+ L + A + I++L + + +Y +I +
Sbjct: 534 EKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNK 593
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G D+AL++ + M + I P+L T++ LL+ L GRV D E
Sbjct: 594 GDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDME 635
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 35/200 (17%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T++D +G A ++ V MQ+KGI + +++ SV+ G + AV I ++M
Sbjct: 442 TFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDM 501
Query: 128 KLKECYP-----------------------------------TIVSYTAYMKILFLNDRV 152
K+ P +I +Y +K L N ++
Sbjct: 502 IHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQI 561
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EA ++ + +GL P+ +Y ++ G + ALE+ +M + ++P + L
Sbjct: 562 DEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPL 621
Query: 213 IEKCCKAGETRTIILILRYM 232
+ AG + + ++M
Sbjct: 622 LSALGSAGRVHDMECLYQHM 641
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+A+L + +S G + FTY +L + +I + + + +G+ D V+Y +
Sbjct: 527 EQAFLLVEKM-KSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNT 585
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ N GD D A+ + +EM + PT+ +Y + L RV + +Y+ M+ +
Sbjct: 586 IISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKN 645
Query: 167 LPPNCYTYTVLME 179
+ P+ Y E
Sbjct: 646 VEPSSSIYGTRCE 658
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/139 (20%), Positives = 57/139 (41%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +++D + E+ + E M+ G++ TY ++ L +D A + +
Sbjct: 513 YNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLT 572
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ P +VSY + A ++ +EM + + P TY L+ L AG+
Sbjct: 573 NQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVH 632
Query: 189 EALEIFSKMQEAGVQPDKA 207
+ ++ M V+P +
Sbjct: 633 DMECLYQHMVHKNVEPSSS 651
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 200/492 (40%), Gaps = 33/492 (6%)
Query: 20 AQDLLKNLPIKWDSYTVNQVL-----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
A LL LP D+ + N VL + H A L + + +YT ++
Sbjct: 64 ATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMR 123
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + M+ G+ D VTY +++ L +A +VD AV + EM P
Sbjct: 124 ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 183
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+V Y++ ++ + R ++ V+ EM ++G+ P+ YT L++ L + GK ++A +
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
M G++P+ N+LI CK G + I +L+ M E +A + ++
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 303
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID---QGLVLILLKKK-----NL 306
E D +W + + I + V F + I+G I Q + + ++ NL
Sbjct: 304 LEMDEAMWLLEEMVRGKNIVKPNVVTFNSV-IQGLCDIGRMRQAFQVRAMMEETGCMVNL 362
Query: 307 VAIDSLLSG------------IMDKSIQL----DSAVISTIIEVNCDHRRRDGALLAFEY 350
V + L+ G +MD+ L DS S +I+ C + D A
Sbjct: 363 VTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLST 422
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ E Y+ L+ + + + + EM L V + +IH A
Sbjct: 423 MRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGD 481
Query: 411 PVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A ++ S++ E A TY+ +I ++ +G + A + K M G P + F+
Sbjct: 482 LKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541
Query: 469 LLAGLEKLGRVS 480
L+ G G ++
Sbjct: 542 LIQGYSTKGEIN 553
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 4/219 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D FTY+ ++ F + ++ + + M+++GI + Y ++ + G ++
Sbjct: 390 SLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMME 449
Query: 119 GAVNIWEEMKLKECYP-TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A N++ EM +P +V+Y+ + +K A ++ K ++ GL P+ TY+++
Sbjct: 450 RARNLFNEMD--NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIV 507
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ ++G E A + +M +G PD A + LI+ GE ++ ++R M +
Sbjct: 508 INMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNI 567
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
AL + L T VA L Q P FS E N
Sbjct: 568 ALDSKIIS-TLSTSLVASNEGKALLQSLPDFSAEISKGN 605
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 128/309 (41%), Gaps = 52/309 (16%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI---DAVTYTSVMHWLSNAGD 116
+G D TY T++ + + ++ E M +G NI + VT+ SV+ L + G
Sbjct: 284 KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGR 342
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A + M+ C +V+Y + L +V++A ++ EM GL P+ +TY++
Sbjct: 343 MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQP-------------------------------- 204
L++ + + + A ++ S M++ G++P
Sbjct: 403 LIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNF 462
Query: 205 --DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
D A + +I CKAG+ +T +L+ + + L + + F + + ++
Sbjct: 463 PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANG 522
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ + F+ D +++ L+ K + + L+ ++ K+I
Sbjct: 523 VLKQMTASGFLPD--------------VAVFDSLIQGYSTKGEINKVLELIREMITKNIA 568
Query: 323 LDSAVISTI 331
LDS +IST+
Sbjct: 569 LDSKIISTL 577
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 90/215 (41%), Gaps = 4/215 (1%)
Query: 75 IFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+ G R+ ++ ELM E G+ D+ TY+ ++ VD A ++ M+ +
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P + Y + + ++ A +++ EM P + Y+ ++ +AG + A
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAK 486
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
E+ + + G+ PD +I+I K+G+ +L+ M + VF +Q +
Sbjct: 487 ELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY 546
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
E + +L + + D+ + ++T +
Sbjct: 547 STKGEINKVLELIREMITKNIALDSKIISTLSTSL 581
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 152/386 (39%), Gaps = 54/386 (13%)
Query: 123 IWEEMKLKECYPTI---VSYTAYMKILFLNDRVKEATDVYKEMIQRGLP---PNCYTYTV 176
+ E L + P++ VSY + L A + + M P PN +YTV
Sbjct: 61 LGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTV 120
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
LM L ++A+ + M+ AGV+ D LI C A E + ++ M E+
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ V+ LQ + S W+ V F VE IE + + G
Sbjct: 181 IEPNVVVYSSLLQGY-----CKSGRWEDVGKVF----------VEMSEKGIEPDVVMYTG 225
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQ--LDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L+ L K V G+MD ++ L+ V++ + +NC + E SVK
Sbjct: 226 LIDSLCK----VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINC---------MCKEGSVK 272
Query: 354 MDLN-LERTAYLALIGILIKLNTFPKVAEIVEEMTKA---------GHSL---GVYLGAL 400
+ L++ + + ++ NT K V EM +A G ++ V
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRK 457
+I L R A ++ +++ E+ C TY LIG KA+++ M
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMM-EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL 391
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ P T+++L+ G K+ +V AE
Sbjct: 392 GLEPDSFTYSILIKGFCKMWQVDRAE 417
>gi|356575965|ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 1 [Glycine max]
gi|356575967|ref|XP_003556107.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 2 [Glycine max]
Length = 480
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 7/232 (3%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+ N YK+++ W Q LL P D T N V+ + K F + GF
Sbjct: 238 VLNQYKLIE---WVYQQMLLDGFP--SDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGF 292
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ D T+ +L + G+ + + + M+E GI + +T+++ LS AG++D
Sbjct: 293 SPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKY 352
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++EM EC P +V+YT + + +++A ++Y++MI R PN +TY ++ L
Sbjct: 353 FFDEMIKNECRPDVVAYTVMITGYVVAGEIEKALEMYQDMISREQVPNVFTYNSIIRGLC 412
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AGK++EA + +M+ G P+ N L AG+T ++R M E
Sbjct: 413 MAGKFDEACSMLKEMETKGCSPNSVVYNTLASCLRNAGKTADAHEVIRQMTE 464
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A+ FF W S+ G+ H Y ++ I+ E + ++ + + M EKG+ A T+ ++
Sbjct: 139 AYKFFVWCSQQEGYQHTVNAYHLVMSIYAECEEFKALWRLVDEMIEKGLPATARTFNILI 198
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
AG V + + K P SY A + L + ++ K VY++M+ G P
Sbjct: 199 RTCGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQMLLDGFP 258
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
+ TY ++M R GK ++ + +M G PD NIL+ K + + +
Sbjct: 259 SDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNL 318
Query: 229 LRYMKE 234
L +M+E
Sbjct: 319 LNHMRE 324
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 25 KNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR---SRGFNHDRF--TYTTMLDIFGEA 79
K LP + T N +++T +A L N V R S+ FN F +Y +L
Sbjct: 185 KGLPAT--ARTFNILIRT---CGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILHGLLVL 239
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ +++V++ M G D +TY VM+ G +D + +EM P ++
Sbjct: 240 NQYKLIEWVYQQMLLDGFPSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTF 299
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+ +L D+ A ++ M + G+ P +T L++ L RAG + F +M +
Sbjct: 300 NILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIK 359
Query: 200 AGVQPDKAACNILIEKCCKAGE 221
+PD A ++I AGE
Sbjct: 360 NECRPDVVAYTVMITGYVVAGE 381
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 143/371 (38%), Gaps = 57/371 (15%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
T+ +Y M I + K + EMI++GLP T+ +L+ AG + +E F
Sbjct: 155 TVNAYHLVMSIYAECEEFKALWRLVDEMIEKGLPATARTFNILIRTCGEAGLAKNLVERF 214
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTF 251
K + +P K + N ++ + + I + + M + L Y + A
Sbjct: 215 IKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQMLLDGFPSDILTYNIVMYAKYRL 274
Query: 252 KVADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
D+ LL ++ FSP+F + N L+ +L K +A
Sbjct: 275 GKLDQFHRLLDEMGRNGFSPDFHTFNI------------------LLHVLGKGDKPLAAL 316
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+LL+ + + I+ +T+I+ D F+ +K + + AY +I
Sbjct: 317 NLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNECRPDVVAYTVMITGY 376
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
+ K E+ ++M +R VP +F T
Sbjct: 377 VVAGEIEKALEMYQDMI--------------------SREQVP--NVF-----------T 403
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK 489
Y ++I AG D+A + K M KG P+ +N L + L G+ +DA E+ R+
Sbjct: 404 YNSIIRGLCMAGKFDEACSMLKEMETKGCSPNSVVYNTLASCLRNAGKTADAHEVIRQMT 463
Query: 490 KSIQ-ADALSK 499
+ ++ AD S+
Sbjct: 464 EKVKHADIHSR 474
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTA 429
+L + +++EM + G S + +L+H LG +P+ A + + + E +
Sbjct: 273 RLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVL 332
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKE 488
+T LI AG+ D + M + P + + V++ G G + A E+Y+
Sbjct: 333 HFTTLIDGLSRAGNLDACKYFFDEMIKNECRPDVVAYTVMITGYVVAGEIEKALEMYQ-- 390
Query: 489 KKSIQADALSKDAVP 503
D +S++ VP
Sbjct: 391 ------DMISREQVP 399
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D YT M+ + A I +++ M + + TY S++ L AG D A ++
Sbjct: 365 DVVAYTVMITGYVVAGEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEACSML 424
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+EM+ K C P V Y L + +A +V ++M ++
Sbjct: 425 KEMETKGCSPNSVVYNTLASCLRNAGKTADAHEVIRQMTEK 465
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 120/522 (22%), Positives = 205/522 (39%), Gaps = 59/522 (11%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS-----RSRGFNHD 65
+ K W A +++ K D+ Q++ + +A LF +S R +
Sbjct: 252 LCKEGRWSDALVMIEREDFKLDTVLCTQMISG---LMEASLFDEAISFLHRMRCNSCIPN 308
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
TY T+L F + K++ K + +M +G N + + S++H NA D A +
Sbjct: 309 VVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLN 368
Query: 126 EMKLKECYPTIVSYTAYM------------KILFLNDRVKE------------------- 154
M C P V Y ++ +L L ++V E
Sbjct: 369 RMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFAR 428
Query: 155 ----------ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
A + K M+++G P+ TY+ ++ +L A K E+A +F +M+ GV P
Sbjct: 429 CLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIP 488
Query: 205 DKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEA-LQTFKVADENDSL 260
D ILI+ CK G + R+ + + + + Y A L+T +V +D
Sbjct: 489 DVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIF 548
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
V +P I+ + V+ + E + + + ++ + V D G S
Sbjct: 549 HRMVDAGCAPNTITYSALVDGLCKAGESQKACE--VYAKMIGTSDNVGSDFYFEGEHTDS 606
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I + +I+ C + A + Y ALI K+
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQ 666
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGV 437
E+ M+K G+ V+ LI + RR A K+ S + E CT TYTA+I
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE-SSCTPNVVTYTAMIDG 725
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
G KALK+ M ++G +P++ T+ L+ GL K G+V
Sbjct: 726 LCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKV 767
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 164/418 (39%), Gaps = 87/418 (20%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++D +A ++ + + ++M G + + Y +++ G +D A ++ M
Sbjct: 613 TYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRM 672
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
PT+ +YT+ + +F + R+ A V +M++ PN TYT +++ L R G+
Sbjct: 673 SKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGEC 732
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
++AL++ S M++ G P+ LI+ K+G+ + + M A Y ++
Sbjct: 733 QKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVL 792
Query: 248 LQTFKVA---DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ A DE SLL ++ + P++ ++G S+ QG K
Sbjct: 793 INHCCAAGLLDEAHSLLSEMKQTYWPKY-------------VQGYCSVVQGF------SK 833
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+A LL +L+S + +I V Y
Sbjct: 834 KFIASLGLLE-------ELESHGMVSIAPV----------------------------YG 858
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
LI K K E+ +EM + SL +
Sbjct: 859 LLIDSFSKAGRLEKALELHKEMMEVSSSLNI----------------------------- 889
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TYT+LI A +KA ++Y + RKG+ P L F L+ GL K+ + ++A
Sbjct: 890 -TSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEA 946
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 154/350 (44%), Gaps = 43/350 (12%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V S G + Y ++D F + ++ + + VF M + G TYTS++ +
Sbjct: 636 VMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDR 695
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+D A+ + +M C P +V+YTA + L ++A + M +RG PN TYT
Sbjct: 696 RLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYT 755
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L++ L ++GK + +L++F++M G P+ +LI CC AG +L MK+
Sbjct: 756 SLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQT 815
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+P + + + V FS +FI+ +E + + G +SI
Sbjct: 816 ----YWPKYVQGYCS-------------VVQGFSKKFIASLGLLEELES--HGMVSIAPV 856
Query: 296 LVLILLKKKNLVAIDSLL-SGIMDKSIQLDSAVI--------------STIIEVNCDHRR 340
L+ IDS +G ++K+++L ++ +++I+ C +
Sbjct: 857 YGLL---------IDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQ 907
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ A + + + E +A++ LI LIK+N + + ++ M G
Sbjct: 908 LEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 182/501 (36%), Gaps = 73/501 (14%)
Query: 8 VYKILKYSTWDSAQD---LLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRG 61
V K ++ W A + LK+ + T N QVL T M+ + +S G
Sbjct: 179 VRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE-LG 237
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D+FT + R S +++ + +D V T ++ L A D A+
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSD---ALVMIEREDFKLDTVLCTQMISGLMEASLFDEAI 294
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ M+ C P +V+Y + ++ + M+ G PN + L+
Sbjct: 295 SFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSY 354
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
A Y A ++ ++M G P NI I C E + L LAL
Sbjct: 355 CNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDL---------LALAE 405
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
V++E L + V ++ ++ F + G D+ +I L
Sbjct: 406 KVYEEMLASSCVLNKVNT-------------------ANFARC-LCGMGKFDKAFQIIKL 445
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
+M K D++ S +I C+ + + A L F+ + + +
Sbjct: 446 --------------MMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVY 491
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y LI K+ + +EM G S V L+H ++ A+ IF +
Sbjct: 492 TYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRM 551
Query: 422 PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMC----------------RKGIHPS 462
D C T TY+AL+ AG + KA ++Y M I P+
Sbjct: 552 V-DAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPN 610
Query: 463 LGTFNVLLAGLEKLGRVSDAE 483
+ T+ L+ GL K +V DA+
Sbjct: 611 VVTYGALIDGLCKAHKVVDAQ 631
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +++ F + K I+S+ + EL ++I A Y ++ S AG ++ A+ + +EM
Sbjct: 824 YCSVVQGFSK-KFIASLGLLEELESHGMVSI-APVYGLLIDSFSKAGRLEKALELHKEMM 881
Query: 129 LKECYPTIVS---YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
I S YT+ ++ L L ++++A ++Y E+ ++G+ P + L++ L++
Sbjct: 882 EVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVN 941
Query: 186 KYEEALEIFSKMQEAGVQ 203
K+ EAL++ M + GV
Sbjct: 942 KWNEALQLCYSMCDEGVN 959
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 185/465 (39%), Gaps = 69/465 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S G TY+ ++ +G+ S +F+ + K N++ + Y++++H +G++
Sbjct: 313 KSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNM 372
Query: 118 DGAVNIWEEM---------------------------------KLKEC--YPTIVSYTAY 142
D A + EM +LKEC PTI+SY
Sbjct: 373 DRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCL 432
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ + +V +A + KEM G+ N TY++L+ + + A IF M ++G+
Sbjct: 433 INLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGL 492
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN----D 258
QPD+A N+L+E CK G I I M++ R+ F+ ++ F VA + D
Sbjct: 493 QPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFD 552
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+L +P ++ N L+ L++K + S+L +
Sbjct: 553 TLDLMRRSGCAPTVMTYN------------------ALIHGLVRKHQVEKAVSVLDKMSI 594
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM---DLNLERTAYLALIGILIKLNT 375
I + + I+ + AFEY K+ L L+ Y L+ K
Sbjct: 595 AGIAPNEHTYTIIMR---GYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 651
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP--VPAAKIFSLLPED--QKCTATY 431
+ EM+ ++ +LI G ARR AA + + ED T+
Sbjct: 652 MQSALAVTREMSFQKIPRNTFIYNILID--GWARRGDVWEAADLLKQMKEDGIPPNIHTF 709
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
T+ I AG +A + + M G+ P++ TF L+ G ++
Sbjct: 710 TSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARV 754
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ +F + S G D + Y T+L ++ R+ S V M + I + Y +
Sbjct: 619 KAFEYFTKIKES-GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 677
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + GDV A ++ ++MK P I ++T+Y+ ++ A +V +EM GL
Sbjct: 678 IDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGL 737
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGET 222
PN T+T L++ R + AL+ F +M+ AG++PD+AA + L+ G T
Sbjct: 738 KPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRATVMEGST 797
Query: 223 RT-IILILRYMKENRLAL 239
T I + R M EN L +
Sbjct: 798 YTGIFSVCREMFENDLTV 815
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 165/423 (39%), Gaps = 64/423 (15%)
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ FE M+ +GI +A +TS++H + AGD+ GA++ EEMK + T+V+Y+ +
Sbjct: 271 RATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISG 330
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP- 204
+ + A +++KE + N Y+ ++ ++G + A E+ +M+E G+
Sbjct: 331 YGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAP 390
Query: 205 ---------------DKAACNILIEKCCKAGETRTII----LILRYMKENRLALRYPVFK 245
D+ C I+ E+ + G TII LI Y+K ++ + K
Sbjct: 391 IDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISK 450
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
E +++ + N + L+ + +
Sbjct: 451 E-MESHGIKHNNKTY---------------------------------SMLINGFIHLHD 476
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
S+ ++ +Q D A+ + ++E C D A+ FE K + +
Sbjct: 477 FANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRP 536
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------S 419
+I + + ++ M ++G + V LIH L + A +
Sbjct: 537 IIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAG 596
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ P + TYT ++ Y ++G KA + + + G+ + + LL K GR+
Sbjct: 597 IAPNEH----TYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRM 652
Query: 480 SDA 482
A
Sbjct: 653 QSA 655
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A F + + R +R T+ +++ F A + +LM+ G +TY
Sbjct: 512 MDRAIRIFERMQKERMQPSNR-TFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYN 570
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H L V+ AV++ ++M + P +YT M+ + + +A + + ++ +
Sbjct: 571 ALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 630
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL + Y Y L+ ++G+ + AL + +M + + NILI+ + G+
Sbjct: 631 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEA 690
Query: 226 ILILRYMKEN 235
+L+ MKE+
Sbjct: 691 ADLLKQMKED 700
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 133/340 (39%), Gaps = 36/340 (10%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A ++ M RG+ PN + +T L+ AG AL +M+ G++ +ILI
Sbjct: 270 ARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILIS 329
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND---SLLWQVHPQFSPE 271
Y K N +FKEA K+ + N S + H Q
Sbjct: 330 G---------------YGKTNDAQSADNLFKEA--KTKLDNLNGIIYSNIIHAHCQSGNM 372
Query: 272 FISDNDAVEFVTTDIEGPL----SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
++ E I+ P+ S+ G ++ +KK L+ + L +I +
Sbjct: 373 DRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCL 432
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
I+ ++V + A+ + + Y LI I L+ F I E+M
Sbjct: 433 INLYVKVG----KVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 488
Query: 388 KAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
K+G + LL+ ++G+ R A +IF + ++ Q T+ +I + AG
Sbjct: 489 KSGLQPDRAIYNLLVEAFCKMGNMDR---AIRIFERMQKERMQPSNRTFRPIIEGFAVAG 545
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+A M R G P++ T+N L+ GL + +V A
Sbjct: 546 DMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKA 585
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 176/414 (42%), Gaps = 51/414 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D +TY+T+++ + + + + S K V E M+E G +++ VTY +++ L AG ++ A
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+EM+ P +Y A + L R +A + EM GL PN Y+ L++
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+R G +EA +I +M AGVQP+K + LI CK G IL+ M
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMT------- 410
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
K+ D++ + + IEG L
Sbjct: 411 -----------KIGYMADTMTYNLV--------------------IEGHLRQHN------ 433
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K++ + ++ + G + ++ S +I+ + ++ + R G L E + L
Sbjct: 434 -KEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG-ESERASGLL---EQMIADGLKPNA 488
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI + +F E +++MT+ + +Y LI L + + A + +
Sbjct: 489 FVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ E Q TY LI Y AG+ +KA ++ M G++P+ + +L G
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 136/295 (46%), Gaps = 12/295 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y ++ + + + V ++++ G+ D++ Y S++ A D++
Sbjct: 622 KGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEK 681
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV + +EM K P I Y A + +D + A +++ +I +GLPPNC TYT L++
Sbjct: 682 AVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLID 741
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+AG +A++++++M GV PD ++L C +G+ + + I M A+
Sbjct: 742 GYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI 801
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI--EGPLSIDQGLV 297
F + F + + +H + + VE + + G LS + +
Sbjct: 802 -ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLS-EAHTI 859
Query: 298 LILLKKKNLVAID-----SLLSGIMDKS-IQLDSAVISTIIEVNCDHRRRDGALL 346
+ L++KN D SL + ++++ + LD VI +I+ +C D AL+
Sbjct: 860 FVELQQKNASHRDTDHLSSLFTDMINQGLVPLD--VIHNMIQSHCKQGYLDKALM 912
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 161/434 (37%), Gaps = 24/434 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G ++ TY ++ + R+ + + M + G D +TY V+ + + A
Sbjct: 378 GVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEA 437
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P + +Y+ + L + A+ + ++MI GL PN + Y L+
Sbjct: 438 FLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISG 497
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
R G + A E KM + PD N LI G+ I M E
Sbjct: 498 YCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPN 557
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI-EGPLSIDQGLVLI 299
+ + + +A + +H Q ++ ND F+ I EG
Sbjct: 558 DFTYGGLIHGYSMAGNLEKAEQLLH-QMLNSGLNPND---FIYAQILEG----------- 602
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K NL + S L +++K + D+ + +I A+ K L +
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y +LI K K +++EM K G G+ LI + A IF+
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFN 722
Query: 420 L-----LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
LP + TYT LI Y AG A+ +Y M +G+ P ++VL AG
Sbjct: 723 SIICKGLPPN---CVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCS 779
Query: 475 KLGRVSDAEIYRKE 488
G + A +E
Sbjct: 780 NSGDLQQALFITEE 793
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/443 (18%), Positives = 161/443 (36%), Gaps = 53/443 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + F Y ++ + S + M + + D Y S++ LSN G +D A
Sbjct: 483 GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++EM K P +Y + + +++A + +M+ GL PN + Y ++E
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
++ E+ M E G+ PD I+I +G + + +L +++N L
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
++ + F A + + + + E IE +S L+
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLD--------------EMAKKGIEPGISCYNALIDGF 708
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K ++ ++ + I+ K + + +T+I+ C A+ + + + +
Sbjct: 709 CKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDA 768
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y L + I EEM G+++
Sbjct: 769 FVYSVLAAGCSNSGDLQQALFITEEMIARGYAI--------------------------- 801
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+++ L+ + G + +K M K I PSL T ++ GL + G++S
Sbjct: 802 -------ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLS 854
Query: 481 DA-----EIYRKEKKSIQADALS 498
+A E+ +K D LS
Sbjct: 855 EAHTIFVELQQKNASHRDTDHLS 877
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V G D Y +++ F +A + + + M +KGI Y +++ +
Sbjct: 653 VIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSD 712
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D+ A NI+ + K P V+YT + +++A D+Y EM+ G+ P+ + Y+
Sbjct: 713 DISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYS 772
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
VL +G ++AL I +M G ++ N L+ CK G+ + + L M +
Sbjct: 773 VLAAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMD 830
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 13/197 (6%)
Query: 315 GIMDKS-IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
G M+ + I D ST+IE C R + A E + +L Y LIG L +
Sbjct: 232 GFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKC 427
+ +EM G + +I+ L RP A + L+P
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN---- 347
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
Y+ LI + G+AD+A KI K M G+ P+ T++ L+ GL KLGR+ A K
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407
Query: 488 EKKSI--QADALSKDAV 502
+ I AD ++ + V
Sbjct: 408 QMTKIGYMADTMTYNLV 424
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 26/330 (7%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ YTY+ L+E + E A ++ +M+E G + N LI C+AG
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ M++ L Y L D+ LL + S + N V
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLL----DEMSCAGLMPN--VVVY 351
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
+T I+G +++ N ++ + +Q + +I C R
Sbjct: 352 STLIDG-----------FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG 400
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A + K+ + Y +I ++ + + ++ EM K G S VY +++I
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460
Query: 403 H---RLGSARRPVPAAKIFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKG 458
+ ++G + R + + ++ + K A Y LI Y GS A + K M R+
Sbjct: 461 NGLCQIGESER--ASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTREN 518
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ P L +N L+ GL +G++ +A Y E
Sbjct: 519 LTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 190/475 (40%), Gaps = 34/475 (7%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
++NL D V VL + E A FF WV RS F H+R T+ +++I G A +++
Sbjct: 3 IRNLVPSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M +KG+ D + ++ AG V +V ++++M+ TI SY A
Sbjct: 63 HARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALF 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K++ R A + +M+ G+ P +T+ V+M +GK E A F M+ +
Sbjct: 123 KVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIM 182
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD N ++ C+ + MK + + ++ + D D
Sbjct: 183 PDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVD----- 237
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEG----PLSIDQGLVLI-LLKKKNLVAIDSLLSGIMD 318
DA+ FV +++G P +I +L L + + S+L ++D
Sbjct: 238 -------------DALRFV-EEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVD 283
Query: 319 KSIQ-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
K I D+++ +I C D A + +++ + E Y LI K +
Sbjct: 284 KYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYD 343
Query: 378 KVAEIVEEMTKAG---------HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
K ++++++ + H L+ + + + A + L+ +
Sbjct: 344 KAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDP 403
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEQSAYDSLVQSYLKKNEPADAK 458
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 145/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K DRV +A +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CKAG+ +L+ M
Sbjct: 263 PGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ + A E D + + + I + + + PL
Sbjct: 318 -IRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPL- 375
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ L ++L+ +M +Q D ++T+I + D A +
Sbjct: 376 -----IEYLCNNGQTAKAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + GH
Sbjct: 430 LRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIENGH 469
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G L L+I G A + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 351 SVKM-----DLNLERT--AYLALIGILIKLNTFPKVAEIVEEMTKAG-----HSLGVYL- 397
SVKM +L +ERT +Y AL ++++ + +M G H+ V +
Sbjct: 99 SVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMW 158
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
G L ++ +A R K ++P+ TY ++ Y ++A K + M +
Sbjct: 159 GFFLSGKVETANRFFEDMKSREIMPD----VVTYNTMVNGYCRVKKMEEAEKYFVEMKGR 214
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
I P++ T+ L+ G + RV DA + +E K
Sbjct: 215 NIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMK 247
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T++ ++DIF + + + V + M E G+ + +TY S+MH S +V A ++
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M + C P + SY+ + + R+ EA ++ EMI +GL PN +YT L+ +
Sbjct: 360 DVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQL 419
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
GK EA E+F M G PD ++L+E CK G + R M+ L
Sbjct: 420 GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYL 472
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/495 (20%), Positives = 201/495 (40%), Gaps = 67/495 (13%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSR--S 59
+S + ++ +Y +D+ L K + + ++ T+N ++ M+ L F+ +++
Sbjct: 97 LSAIVRMRQY--YDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIK 154
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G T+TT+++ +A + +F+ M +G D TYT++++ L G+
Sbjct: 155 LGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAA 214
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + ++M C P +V+Y+ + L + V EA D++ M +G+ P +YT L++
Sbjct: 215 AAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQ 274
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +++EA + ++M + PD ++LI+ CK G +L+ M E +
Sbjct: 275 GLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV-- 332
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
P I+ N + + +E
Sbjct: 333 -----------------------------EPNVITYNSLMHGYSLQME------------ 351
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+V L ++ + + D S +I C +R D A F + L
Sbjct: 352 ------VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR------LGSARRPVP 413
+Y LI +L + E+ ++M G+ + ++L+ LG A R
Sbjct: 406 TVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFR 465
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
A + L P YT LI +G+ + A K++ + G+ P + + ++ GL
Sbjct: 466 AMQGTYLKPN----LVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGL 521
Query: 474 EKLGRVSDA-EIYRK 487
K G + +A E +RK
Sbjct: 522 CKEGLLDEALEAFRK 536
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 89/177 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D F+Y+ +++ + KRI K +F M +G+ + V+YT+++H G +
Sbjct: 364 TRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLR 423
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++++M P + +Y+ ++ + +A +++ M L PN YT+L+
Sbjct: 424 EARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILI 483
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ + ++G A ++FS++ G+QPD +I CK G + R M+E+
Sbjct: 484 DSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEED 540
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FN + +G + +YTT++ F + ++ + +F+ M G D TY+
Sbjct: 387 IDEAKQLFNEMIH-QGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYS 445
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ G + A ++ M+ P +V YT + + + + A ++ E+
Sbjct: 446 VLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVH 505
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK-AGETRT 224
GL P+ YT ++ L + G +EALE F KM+E G P++ + N++I + E+R
Sbjct: 506 GLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRA 565
Query: 225 IILI 228
+ LI
Sbjct: 566 VQLI 569
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 74/150 (49%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G+ D TY+ +L+ F + + +F MQ + + V YT ++ + +G++
Sbjct: 433 HTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNL 492
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++ E+ + P + YT + L + EA + +++M + G PPN ++Y V+
Sbjct: 493 NHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVI 552
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ ++ A+++ +M++ G D+
Sbjct: 553 IRGFLQHKDESRAVQLIGEMRDKGFVADEG 582
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 2/172 (1%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
++ ++ +I C + D +K+ L + LI L K F + E+
Sbjct: 125 NTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELF 184
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSA 441
++M G VY +I+ L AA + + E Q TY+ LI
Sbjct: 185 DDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKD 244
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
++AL I+ M KGI P++ ++ L+ GL R +A E S+
Sbjct: 245 RLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 92/160 (57%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF ++ YT +LD + + + +++++ M+E+GI DAV +T+++ LS AG+V+
Sbjct: 521 KGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEE 580
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM P +Y + ++ L RV EA + KEM Q+GL + +T+ ++++
Sbjct: 581 AYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIID 640
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
R G+ + A+E F MQ G+ PD NILI CKA
Sbjct: 641 GFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKA 680
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 74/135 (54%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M EKG I+ V YT ++ +++GA +W+EMK + YP V++TA + L
Sbjct: 518 MLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGN 577
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V+EA +V+ EM G PN + Y L+ L G+ EAL++ +M++ G+ D NI
Sbjct: 578 VEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNI 637
Query: 212 LIEKCCKAGETRTII 226
+I+ C+ G+ + I
Sbjct: 638 IIDGFCRRGQMKFAI 652
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 164/405 (40%), Gaps = 25/405 (6%)
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
LM G+ T+T+++H L G+V A +++ ++ P Y M F
Sbjct: 306 HLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKA 365
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
V +A+ +Y+EM G+ P+C T+ +L+ + G+ E++ + + +G+ D +
Sbjct: 366 REVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLY 425
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL----WQVH 265
++++ C AG + +L+ + E L L F + + A D V
Sbjct: 426 DVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR 485
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
F+P + N L++ L +K L LL +++K ++
Sbjct: 486 CGFTPSSSTCNS------------------LLMGLCRKGWLQEARILLYRMLEKGFPINK 527
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ +++ +GA ++ + + + A+ ALI L K + E+ E
Sbjct: 528 VAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLE 587
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT--ALIGVYFSAGS 443
M+ G + LI L R A K+ + + + T+T +I + G
Sbjct: 588 MSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQ 647
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK-LGRVSDAEIYRK 487
A++ + M R G+ P + TFN+L+ G K V EI K
Sbjct: 648 MKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNK 692
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 195/471 (41%), Gaps = 70/471 (14%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T++D + +A+ ++ ++E M+ G++ D VT+ ++ G ++ + + +++
Sbjct: 355 YNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLI 414
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ + Y + L R+ EA + +E++++GL + + L+ RAG +
Sbjct: 415 VSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLED 474
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
+A E + M G P + CN L+ C+ G + ++L M E + + L
Sbjct: 475 KAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLL 534
Query: 249 QT-FKVAD-ENDSLLWQ------VHPQFSPEFISDNDAVEFVTTDIEG---PLSIDQGLV 297
FK+ + E LW+ ++P DAV F T I+G ++++
Sbjct: 535 DGYFKMNNLEGAQFLWKEMKERGIYP----------DAVAF-TALIDGLSKAGNVEEAYE 583
Query: 298 LILLKKK-----NLVAIDSLLSGIMD----------------KSIQLDSAVISTIIEVNC 336
+ L N A +SL+ G+ D K + D+ + II+ C
Sbjct: 584 VFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFC 643
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLA-------LIGILIKLNTFPKVAEIVEEMTKA 389
R G + +++++ L+++R L LIG K EIV +M
Sbjct: 644 ----RRGQM---KFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSC 696
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATY-TALIGVYFSAG 442
G + +H R+ A I ++P+ T TY T L G+ +
Sbjct: 697 GLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPD----TVTYNTMLSGI--CSD 750
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
D+A+ + + + G P++ T N+LL+ K G A I+ ++ + I
Sbjct: 751 ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREIS 801
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 146/350 (41%), Gaps = 31/350 (8%)
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII-----LILRY 231
L+ + G EALE+ M+ GV+P ++ IL+ + G+ ++ +I +
Sbjct: 183 LLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKG 242
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF--SPEFISDNDAVE--------- 280
+ + L + Q V E+ L + P+F SP+ ++ N +
Sbjct: 243 PRPSNLTFNAMICGFCRQHRVVVGES---LLHLMPKFMCSPDVVTFNILINACCIGGRTW 299
Query: 281 --------FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
V + +E ++ ++ L ++ N+V L GI D I ++A+ +T++
Sbjct: 300 VAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLM 359
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ R A L +E ++ + + L+ K +++++ +G
Sbjct: 360 DGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLF 419
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKI 450
L L +++ L A R A K+ L E + +LIG Y AG DKA +
Sbjct: 420 LDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEA 479
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI--YRKEKKSIQADALS 498
Y+ M R G PS T N LL GL + G + +A I YR +K + ++
Sbjct: 480 YRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVA 529
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNA 114
R +G D FT+ ++D F R MK+ E MQ G+ D T+ ++ A
Sbjct: 624 RQKGLLSDTFTFNIIIDGFC---RRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKA 680
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
D+ GA I +M P I +Y YM ++ +A + ++I G+ P+ TY
Sbjct: 681 FDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTY 740
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
++ + + + A+ + +K+ + G P+ N+L+ CK G
Sbjct: 741 NTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQG 785
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/506 (21%), Positives = 201/506 (39%), Gaps = 73/506 (14%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
LKT + FF+ ++ S F H TY M++ G + ++Y+ + M+ GIN
Sbjct: 48 LKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINC 107
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ +++ G + A+ ++ + C PT+ Y + L ++ + +Y
Sbjct: 108 CEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLY 167
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
M + GL PN +TY +L++ L + + + A ++F +M G PD ++ CKA
Sbjct: 168 TNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKA 227
Query: 220 G---ETRTI------------ILILRYMKENRLALRYPVFKEALQTFKVADEN------- 257
G + R + LI KE R+ + + E + D N
Sbjct: 228 GKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN--GVDPNVVSYSCI 285
Query: 258 -DSLLWQVHPQ-----FSPEFISDNDA-VEFVTTDIEGPL---SIDQGLVLILLK----- 302
+SL + + F+ F+ DA + T I+G + + L L L
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF-EYSVKMD------ 355
+ N+VA ++L+ G+ + + ++V CD +R G L YS+ +D
Sbjct: 346 EPNVVAYNTLIHGL------CSNGSLEEALQV-CDQMQRSGCLPNVTTYSILIDGFAKSG 398
Query: 356 ----------------LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
Y ++ +L K + F + +VE+MT G +
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFN 458
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCR 456
I L R A K+ + + C TY L+ F ++A +++ +
Sbjct: 459 TFIKGLCGNGRVEWAMKLLERM-QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + P+L T+N +L G + G + +A
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEA 543
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TYT M+D+ + + E M +G + +T+ + + L G V+
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + E M+ C P I +Y + LF ++ +EA +++E+ R L PN TY ++
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
RAG EAL++F K G PD N +I CK G+ +
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+A+ F + +R + TY T+L F A + +F +G D++TY +
Sbjct: 506 EEAFGLFQEI-EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564
Query: 107 VMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++H G V A + E + +KE +P I++YT+ + ++EA + I +
Sbjct: 565 MIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQ 624
Query: 166 GLPPNCYTYTVLME 179
G+ PN T+ L+
Sbjct: 625 GICPNFATWNALVR 638
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 89/210 (42%), Gaps = 6/210 (2%)
Query: 11 ILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN--HD 65
+ K S +D A L++ + ++ ++ T N +K + + R +G +
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
TY +LD + +F+ ++ + + + VTY +V++ S AG + A+ ++
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-RGLPPNCYTYTVLMEYLVRA 184
+ ++ P ++Y + +VK A + + + + P+ TYT L+
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNW 608
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIE 214
EEA+ K G+ P+ A N L+
Sbjct: 609 MNIEEAMAFLDKAINQGICPNFATWNALVR 638
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVS 57
M + + N K L+ A DLL +P I D N V +++ N
Sbjct: 399 MLEVLCNAEKTLE------AIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFD 452
Query: 58 R--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ + G D FTY M+ +G + +FE+M+ D VTY S+++ L G
Sbjct: 453 KMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHG 512
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D+D A +++EM+ K P + +Y+ ++ +++V+ A ++ EMI G PN TY
Sbjct: 513 DLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYN 572
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+L++ L R GK EEA +++ M++ G+ PD +IL
Sbjct: 573 ILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSIL 609
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 185/433 (42%), Gaps = 28/433 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +TY ++ ++ +S V+E M+ KG +D Y ++ L+ AG VD A
Sbjct: 181 GLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQA 240
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++E+MK K C P +YT +++ R + + EM+ +G N + ++E
Sbjct: 241 FQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEA 300
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL----RYMKENR 236
L + ++ + + SKM E QP++ +I ++ G+ + +L R+M NR
Sbjct: 301 LGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFM--NR 358
Query: 237 LALRYPVFKEALQTFKVADENDSL--LWQVHPQFSPE-FIS----------DNDAVEFVT 283
Y V K ++ ++ ++ +W H + + F+S +A++ +
Sbjct: 359 SIYSYLV-KSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLH 417
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK----SIQLDSAVISTIIEVNCDHR 339
E + D G+ ++ + S +S + DK I D + +I
Sbjct: 418 MMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVG 477
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
D A FE + Y +LI L K + + +EM + G+ V+ +
Sbjct: 478 LVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYS 537
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCR 456
+LI G + + A +F + + CT TY L+ G ++A K+Y+TM +
Sbjct: 538 ILIECFGKSNKVEMACSLFDEMIS-EGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQ 596
Query: 457 KGIHPSLGTFNVL 469
+G+ P T+++L
Sbjct: 597 QGLIPDSITYSIL 609
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y + G+ K++S + +F+ M+ GI D TY ++ G VD
Sbjct: 422 KGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDK 481
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E M+ C P +V+Y + + L + + EA ++KEM ++G P+ +TY++L+E
Sbjct: 482 ASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIE 541
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ K E A +F +M G P+ NIL++ + G+T + MK+ L
Sbjct: 542 CFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGL 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 174/458 (37%), Gaps = 54/458 (11%)
Query: 61 GFNHDRFTYTTMLDIF--------------------GEAKRISSMKY------------- 87
GF HD F+Y +L + G A IS++
Sbjct: 113 GFRHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEMER 172
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
EL + G+ + TY ++ + +V ++EEM+ K I +Y + L
Sbjct: 173 CLELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALA 232
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
V +A V+++M Q+ P+ YTYT+L+ +AG+ + L F +M G +
Sbjct: 233 KAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLI 292
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
A N +IE K +I +L M EN + L + L
Sbjct: 293 AFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRL------- 345
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
N+ ++ + + SI LV L K + ++ + + + D
Sbjct: 346 --------NEVLDICSRFMN--RSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDA 395
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++EV C+ + A+ + + + Y + L KL ++ + ++M
Sbjct: 396 FVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMK 455
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSA 444
G V+ ++I G A+++F ++ E C TY +LI G
Sbjct: 456 TNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM-EASSCKPDVVTYNSLINCLGKHGDL 514
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D+A ++K M KG P + T+++L+ K +V A
Sbjct: 515 DEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMA 552
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 185/402 (46%), Gaps = 30/402 (7%)
Query: 24 LKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+++ I+ D T N +L + +E+A + F ++ S G D TY +++D F +
Sbjct: 179 MRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNES-GVVADAVTYKSLVDTFAGSN 237
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
++ ++ + M+++G + D Y S++ ++AG+V GA ++++M+ C P + +Y+
Sbjct: 238 QLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYS 297
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
++I ++ ++ +M + PP TY L++ G ++E++ +F M ++
Sbjct: 298 TLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDS 357
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDS 259
GV+PD A + L+ C + G TR I ++M N + ++ K+A D+
Sbjct: 358 GVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDA 417
Query: 260 LL--WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA----IDSLL 313
L+ +++ +S DA+ + +G L ++ G L + K A ++S++
Sbjct: 418 LVSYYRIREAGLDPQVSAYDAL--IQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVM 475
Query: 314 S-----GIMDKSI------------QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
G+ D+++ ++D T++ V CD + A F +
Sbjct: 476 EAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSK 535
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
Y L+ + ++ + + ++++EM AG V +G
Sbjct: 536 VPGARVYCLLLSLCVRRSKWDYATQLLDEMIAAGGLHQVVVG 577
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG-DVDGAVNIWE 125
+ +T +++ +G + + ++ M+++ + + +TY +V++ S G D +G +N++
Sbjct: 118 YAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNLFA 177
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+M+ + P +++Y + V++A V+K M + G+ + TY L++ +
Sbjct: 178 QMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSN 237
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+ E+ +M++ G PD A N LIE AG + + M+ A +
Sbjct: 238 QLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYS 297
Query: 246 EALQTFKVADENDSLLWQVHPQFS 269
L+ + N QV FS
Sbjct: 298 TLLRIYG----NQGCFEQVRSLFS 317
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 165/395 (41%), Gaps = 32/395 (8%)
Query: 120 AVNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ +++ M+ ++ C PT YT + I+ +++ ++++++M + + N Y +T L+
Sbjct: 65 ALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALI 124
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
R G+YE +L + ++M++ V+P+ N ++ C K G +L L
Sbjct: 125 NAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACSKGGLDWEGLLNL------FAQ 178
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQG 295
+R+ + L T+ ++LL S + + A+ F T + G ++ +
Sbjct: 179 MRHEGIQPDLITY------NTLL----SACSSRGLVEQAAMVFKTMNESGVVADAVTYKS 228
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
LV L ++ LL + D+ D A +++IE D GA F+ +
Sbjct: 229 LVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGG 288
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y L+ I F +V + +M + V LI G +
Sbjct: 289 CAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESI 348
Query: 416 KIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
+F + P+D ATY+AL+ V G +A KI++ M PSL L
Sbjct: 349 NLFHDMVDSGVKPDD----ATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGL 404
Query: 470 LAGLEKLGRVSDAEI--YRKEKKSIQADALSKDAV 502
++ K+ DA + YR + + + DA+
Sbjct: 405 ISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDAL 439
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVS 57
M + + N K L+ A DLL +P I D N V +++ N
Sbjct: 341 MLEVLCNAEKTLE------AIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFD 394
Query: 58 R--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ + G D FTY M+ +G + +FE+M+ D VTY S+++ L G
Sbjct: 395 KMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHG 454
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D+D A +++EM+ K P + +Y+ ++ +++V+ A ++ EMI G PN TY
Sbjct: 455 DLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYN 514
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+L++ L R GK EEA +++ M++ G+ PD +IL
Sbjct: 515 ILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 185/433 (42%), Gaps = 28/433 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +TY ++ ++ +S V+E M+ KG +D Y ++ L+ AG VD A
Sbjct: 123 GLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQA 182
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++E+MK K C P +YT +++ R + + EM+ +G N + ++E
Sbjct: 183 FQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEA 242
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL----RYMKENR 236
L + ++ + + SKM E QP++ +I ++ G+ + +L R+M NR
Sbjct: 243 LGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFM--NR 300
Query: 237 LALRYPVFKEALQTFKVADENDSL--LWQVHPQFSPE-FIS----------DNDAVEFVT 283
Y V K ++ ++ ++ +W H + + F+S +A++ +
Sbjct: 301 SIYSYLV-KSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLH 359
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK----SIQLDSAVISTIIEVNCDHR 339
E + D G+ ++ + S +S + DK I D + +I
Sbjct: 360 MMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVG 419
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
D A FE + Y +LI L K + + +EM + G+ V+ +
Sbjct: 420 LVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYS 479
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCR 456
+LI G + + A +F + + CT TY L+ G ++A K+Y+TM +
Sbjct: 480 ILIECFGKSNKVEMACSLFDEMIS-EGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQ 538
Query: 457 KGIHPSLGTFNVL 469
+G+ P T+++L
Sbjct: 539 QGLIPDSITYSIL 551
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y + G+ K++S + +F+ M+ GI D TY ++ G VD
Sbjct: 364 KGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDK 423
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E M+ C P +V+Y + + L + + EA ++KEM ++G P+ +TY++L+E
Sbjct: 424 ASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIE 483
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ K E A +F +M G P+ NIL++ + G+T + MK+ L
Sbjct: 484 CFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGL 541
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 179/458 (39%), Gaps = 54/458 (11%)
Query: 61 GFNHDRFTYTTMLDIF--------------------GEAKRISSMKYV------------ 88
GF HD F+Y +L + G A IS++ +
Sbjct: 55 GFRHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEVER 114
Query: 89 -FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
EL + G+ + TY ++ + +V ++EEM+ K I +Y + L
Sbjct: 115 CLELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALA 174
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
V +A V+++M Q+ P+ YTYT+L+ +AG+ + L F +M G +
Sbjct: 175 KAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLI 234
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
A N +IE K +I +L M EN + L +A E Q+H
Sbjct: 235 AFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDI--LATEG-----QLHRL 287
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
N+ ++ + + SI LV L K + ++ + + + D
Sbjct: 288 --------NEVLDICSRFMN--RSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDA 337
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++EV C+ + A+ + + + Y + L KL ++ + ++M
Sbjct: 338 FVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMK 397
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSA 444
G V+ ++I G A+++F ++ E C TY +LI G
Sbjct: 398 TNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM-EASSCKPDVVTYNSLINCLGKHGDL 456
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D+A ++K M KG P + T+++L+ K +V A
Sbjct: 457 DEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMA 494
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/506 (21%), Positives = 201/506 (39%), Gaps = 73/506 (14%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
LKT + FF+ ++ S F H TY M++ G + ++Y+ + M+ GIN
Sbjct: 48 LKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINC 107
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ +++ G + A+ ++ + C PT+ Y + L ++ + +Y
Sbjct: 108 CEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLY 167
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
M + GL PN +TY +L++ L + + + A ++F +M G PD ++ CKA
Sbjct: 168 TNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKA 227
Query: 220 G---ETRTI------------ILILRYMKENRLALRYPVFKEALQTFKVADEN------- 257
G + R + LI KE R+ + + E + D N
Sbjct: 228 GKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN--GVDPNVVSYSCI 285
Query: 258 -DSLLWQVHPQ-----FSPEFISDNDA-VEFVTTDIEGPL---SIDQGLVLILLK----- 302
+SL + + F+ F+ DA + T I+G + + L L L
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF-EYSVKMD------ 355
+ N+VA ++L+ G+ + + ++V CD +R G L YS+ +D
Sbjct: 346 EPNVVAYNTLIHGL------CSNGSLEEALQV-CDQMQRSGCLPNVTTYSILIDGFAKSG 398
Query: 356 ----------------LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
Y ++ +L K + F + +VE+MT G +
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFN 458
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCR 456
I L R A K+ + + C TY L+ F ++A +++ +
Sbjct: 459 TFIKGLCGNGRVEWAMKLLERM-QGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEA 517
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + P+L T+N +L G + G + +A
Sbjct: 518 RNLQPNLVTYNTVLYGFSRAGMMGEA 543
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + TYT M+D+ + + E M +G + +T+ + + L G V+
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + E M+ C P I +Y + LF ++ +EA +++E+ R L PN TY ++
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
RAG EAL++F K G PD N +I CK G+ +
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+A+ F + +R + TY T+L F A + +F +G D++TY +
Sbjct: 506 EEAFGLFQEI-EARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNT 564
Query: 107 VMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++H G V A + E + +KE +P I++YT+ + ++EA + I +
Sbjct: 565 MIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQ 624
Query: 166 GLPPNCYTYTVLME 179
G+ PN T+ L+
Sbjct: 625 GICPNFATWNALVR 638
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 89/210 (42%), Gaps = 6/210 (2%)
Query: 11 ILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN--HD 65
+ K S +D A L++ + ++ ++ T N +K + + R +G +
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
TY +LD + +F+ ++ + + + VTY +V++ S AG + A+ ++
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-RGLPPNCYTYTVLMEYLVRA 184
+ ++ P ++Y + +VK A + + + + P+ TYT L+
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNW 608
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIE 214
EEA+ K G+ P+ A N L+
Sbjct: 609 MNIEEAMAFLDKAINQGICPNFATWNALVR 638
>gi|224133904|ref|XP_002327708.1| predicted protein [Populus trichocarpa]
gi|222836793|gb|EEE75186.1| predicted protein [Populus trichocarpa]
Length = 58
Score = 97.8 bits (242), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
MQEAGVQPDKAACNIL+E+CCKAGET T+ IL+YMK+N L LRYPVF EAL+T K A
Sbjct: 1 MQEAGVQPDKAACNILVERCCKAGETTTMTHILQYMKQNHLVLRYPVFMEALETLKDA 58
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 107/196 (54%), Gaps = 4/196 (2%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK D YT N ++ M++ F+ + + +G + TY +++D + K ++
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK-QGIKPNFVTYNSLMDGYCLVKEVNKA 349
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
K +F M + G+N D +Y+ +++ D A+N+++EM K P +V+Y++ +
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + R+ A + +M RG+PPN TY +++ L + + ++A+ + +K ++ G QPD
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPD 469
Query: 206 KAACNILIEKCCKAGE 221
+ +ILI+ C++G+
Sbjct: 470 ISTYSILIKGLCQSGK 485
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 168/423 (39%), Gaps = 82/423 (19%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D T+TT+ +I + + G + D ++Y +++H L G+ A
Sbjct: 150 GYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ + + P +V Y + + V EA D++ EM+ +G+ P+ TY+ L+
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISG 269
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
GK ++A+++F+KM ++PD NIL+ CK G+ MKE +
Sbjct: 270 FCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK----------MKEGKTVF- 318
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
D ++ Q P F++ N S+ G L+
Sbjct: 319 -----------------DMMMKQ---GIKPNFVTYN--------------SLMDGYCLVK 344
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K +++ G ++ IQ S +I+ C ++ D A+ F+ + ++ +
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGF----CKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y +LI L K ++V++M H GV
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQM----HDRGV------------------------- 431
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
P + TY +++ DKA+ + KG P + T+++L+ GL + G++
Sbjct: 432 -PPN---ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLE 487
Query: 481 DAE 483
DA
Sbjct: 488 DAR 490
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 4/240 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++ IK + T N ++ + + KA FN +++ G N D +Y+ M++ F +
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG-GVNPDIQSYSIMINGFCK 377
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
K+ +F+ M K I D VTY+S++ LS +G + A+ + ++M + P I +
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICT 437
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y + + L +V +A + + +G P+ TY++L++ L ++GK E+A ++F +
Sbjct: 438 YNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLL 497
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
G D A I+I+ C G + +L M++N ++ + + DEND
Sbjct: 498 VKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEND 557
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 91/177 (51%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY++++D ++ RIS + + M ++G+ + TY S++ L VD A+ +
Sbjct: 399 DVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALL 458
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ K K P I +Y+ +K L + ++++A V+++++ +G + Y YT++++
Sbjct: 459 TKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVE 518
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
G + EAL + SKM++ G PD I+I K E +LR M L L +
Sbjct: 519 GLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF 575
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 154/376 (40%), Gaps = 34/376 (9%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+SY++ N+ V +A ++ +++R P + + ++ LV++ Y L +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ----- 249
KM+ G++P+ CNILI C+ G + + VF + L+
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLG---------------LIPFAFSVFAKILKMGYVP 153
Query: 250 ---TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
TF + L Q+ F F A+ F I I GL + +
Sbjct: 154 DTITFTTLSKGLCLKGQIQQAFL--FHDKVVALGFHFDQISYGTLI-HGLCKV---GETR 207
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
A+D LL + +Q + + +TII+ C + + A F V ++ + Y AL
Sbjct: 208 AALD-LLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL 266
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED-- 424
I L ++ +M VY +L++ + +F ++ +
Sbjct: 267 ISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ TY +L+ Y +KA I+ TM + G++P + ++++++ G K+ + +A
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 485 YRKE--KKSIQADALS 498
KE +K+I D ++
Sbjct: 387 LFKEMHRKNIIPDVVT 402
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 76/163 (46%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + D TY+ ++ F ++ +F M + I D T+ +++ G +
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ M + P V+Y + M L V +A ++ M Q G+ P+ +Y++++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ K++EA+ +F +M + PD + LI+ K+G
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +GF D TY+ ++ ++ ++ + VFE + KG N+D YT ++ G
Sbjct: 462 KDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLF 521
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ A+ + +M+ C P +Y + LF D A + +EMI RGLP N Y
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 187/451 (41%), Gaps = 34/451 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + ++T +L KR S +M V + G D +YT ++ L + +
Sbjct: 43 GLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEE 102
Query: 120 AVNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV++ M C P +VSYT + F D V +A ++ EM+ RG+PP+ T +
Sbjct: 103 AVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSI 162
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L + ++A E+ +M + + PD N L+ +G+ + + IL+ M +
Sbjct: 163 IDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQ 222
Query: 238 ---ALRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ Y + + L F E +L + + +P + + T +G L
Sbjct: 223 PPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYAT--KGDLVEM 280
Query: 294 QGLVLILLKKKNLVAIDSLLSGIM----DKSIQLDSAVIS-----------------TII 332
L+ +++ +N V D + I K +LD A+++ T+I
Sbjct: 281 NNLIDLMV--QNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMI 338
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C R D A+ F + L+ + + LI + K E+ EM G
Sbjct: 339 DGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIR 398
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKI 450
V + +I +L + A +F L+P + +Y A+I YF AG D+ LK+
Sbjct: 399 PTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKL 458
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
M G+ P+ TFN LL + +G D
Sbjct: 459 LDDMLSVGLKPNAVTFNTLLDDMLSMGLKPD 489
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A L FN + R +G D +Y TM+D + R+ + F M + G++ D V +T
Sbjct: 312 LDEAMLTFNKM-RQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFT 370
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H S G + A ++ EM + PT+V +T + LF +V EA ++ M
Sbjct: 371 NLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIA 430
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA-------------------GVQPDK 206
+ PN +Y ++ AGK +E L++ M G++PD
Sbjct: 431 SVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDV 490
Query: 207 AACNILIEKCCKAGETRTIILILRYM 232
A CN LI+ CC+ G ++ + R M
Sbjct: 491 ATCNTLIDSCCEDGRIEDVLTLFREM 516
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 1/190 (0%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ F + RG D T +++D + + + + V M +K I D TY S+
Sbjct: 139 KAYTLFCEM-LDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSL 197
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H ++G + AV I ++M P V+Y+ + L EA ++ MIQ
Sbjct: 198 VHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRG 257
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
PN TY L+ G E + M + GV+PD NI I K G +L
Sbjct: 258 NPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAML 317
Query: 228 ILRYMKENRL 237
M++ L
Sbjct: 318 TFNKMRQQGL 327
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 64/356 (17%), Positives = 128/356 (35%), Gaps = 50/356 (14%)
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K+ PT V+YT + + A ++I+ GL N ++T ++ L + +
Sbjct: 7 KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66
Query: 190 ALEIFSK-MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A+ I + + G PD + +L++ C + + ++ M E+
Sbjct: 67 AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAED------------- 113
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
P +S TT I G K+ +
Sbjct: 114 ----------------GDHCPPNVVS-------YTTVIHG-----------FFKEDEVGK 139
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+L ++D+ I D ++II+ C + D A + + T Y +L+
Sbjct: 140 AYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVH 199
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--K 426
+ + I+++M++ G ++LI L A +I + + + +
Sbjct: 200 GYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNP 259
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
ATY L+ Y + G + + M + G+ P FN+ + K GR+ +A
Sbjct: 260 NVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEA 315
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 175/464 (37%), Gaps = 54/464 (11%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTY 69
+Y D+A+ L+ ++P+ D+YT +++ + A + + R R TY
Sbjct: 117 RYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR-RECQPSVVTY 175
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
T +L+ ++ V + M+ KG + VTY +++ + VD A I +
Sbjct: 176 TVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSS 235
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
P VSYT +K L R ++ ++ EM++ PN T+ +L+ + R G E
Sbjct: 236 YGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVER 295
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A+E+ +M E G + CNI+I CK G L M + + L+
Sbjct: 296 AIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLK 355
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
A W+ + E + N VT + + IL +K +
Sbjct: 356 GLCRAGR-----WEDAKELLNEMVRKNCPPNEVTFNT---------FICILCQKGLIDQA 401
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
L+ + + + + ++ C R D AL F S+ + N Y L+
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFN-SLPCEPNT--ITYTTLLTG 458
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA 429
L AE++ EM + L V
Sbjct: 459 LCHAERLDAAAELLAEMMQNDCPLNV---------------------------------V 485
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
T+ L+ + G ++A+++ + M G P+L TFN LL G+
Sbjct: 486 TFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGI 529
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/488 (20%), Positives = 197/488 (40%), Gaps = 39/488 (7%)
Query: 2 RDTISNVYKILKYSTWDS-------AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFN 54
RD ++ ++++ ST L++NL + + +VL+T
Sbjct: 48 RDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRT------------ 95
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
+ G D F Y T++ + R+ + + L+ + DA TYT ++ L +
Sbjct: 96 --AEGSGAPVDVFAYNTLVAGYCRYGRLDAAR---RLIASMPVPPDAYTYTPLIRGLCDR 150
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G V A+++ ++M +EC P++V+YT ++ + + +A V EM +G PN TY
Sbjct: 151 GRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTY 210
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
V++ + R + ++A +I +++ G QPD + +++ C A + ++ M E
Sbjct: 211 NVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE 270
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
N F ++ F + + + ++ V I +D
Sbjct: 271 NNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDD 330
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ + D+ +T+++ C R + A V+
Sbjct: 331 AF--------------EFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRK 376
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + I IL + + ++E+M + G S+G+ L++ R A
Sbjct: 377 NCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSA 436
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
++F+ LP + T TYT L+ A D A ++ M + ++ TFNVL++
Sbjct: 437 LELFNSLPCEPN-TITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFC 495
Query: 475 KLGRVSDA 482
+ G V +A
Sbjct: 496 QKGFVEEA 503
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 85/169 (50%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TYTT+L A+R+ + + M + ++ VT+ ++ + G V+ A+ + ++
Sbjct: 450 ITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQ 509
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M C P ++++ + + + +EA ++ ++ +G+ + TY+ +++ L R +
Sbjct: 510 MMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDR 569
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
EEA+++F +Q+ G++P N ++ CK ET I +M N
Sbjct: 570 IEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSN 618
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + T+ T+LD E + + KGI++D +TY+S++ LS ++ A
Sbjct: 514 GCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEA 573
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++ ++ P V Y + L A D + M+ PN TY +L+E
Sbjct: 574 VQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEG 633
Query: 181 LVRAGKYEEALEIFSKMQEAGV 202
L R G +EA + S++ GV
Sbjct: 634 LAREGLLKEARYVLSELCSRGV 655
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + D TY++++D+ RI +F +Q+ G+ AV Y ++ L + D
Sbjct: 547 SKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETD 606
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
A++ + M C P +Y ++ L +KEA V E+ RG+
Sbjct: 607 RAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 91/207 (43%), Gaps = 6/207 (2%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEK----AWLFFNWVSRSRGFNHDRFTYTTML 73
DSA +L +LP + ++ T +L E+ A L + N T+ ++
Sbjct: 434 DSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLN--VVTFNVLV 491
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
F + + + + M E G + +T+ +++ ++ + + A+ + + K
Sbjct: 492 SFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGIS 551
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
++Y++ + +L DR++EA ++ + G+ P Y ++ L + + + A++
Sbjct: 552 LDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDF 611
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAG 220
F+ M P+++ ILIE + G
Sbjct: 612 FAHMVSNSCMPNESTYVILIEGLAREG 638
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 11/118 (9%)
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-----SLLPED 424
LI + + A +VE T G + VYL LI L R AA++ S P D
Sbjct: 45 LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVD 104
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y L+ Y G D A ++ +M + P T+ L+ GL GRV DA
Sbjct: 105 ---VFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDA 156
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
E Q TYT L+ + +A+K+ M KG P++ T+NV++ G+ + RV DA
Sbjct: 167 ECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDA 226
Query: 483 E--IYRKEKKSIQADALSKDAV 502
+ R Q D +S V
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTV 248
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 196/465 (42%), Gaps = 28/465 (6%)
Query: 29 IKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNH-DRFTYTTMLDIFGEAKRISS 84
+ +D+ TVN L +E A + R R + D + +LD + ++ + +
Sbjct: 160 VPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEA 219
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+ M+ +G+ +D V Y +++ L AG+ D A + E MK P +V+YT ++
Sbjct: 220 ALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIA 279
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+ V +A +Y+EM++ G+ P+ T + L++ L RAG++ EA +F +M++ G P
Sbjct: 280 ECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAP 339
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV 264
+ LI+ KA +L + + + ++ + + D +
Sbjct: 340 NHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMF 399
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
H +SDN VT + L+ L + N+ + +L + DKS+ +
Sbjct: 400 HCA-----LSDNHTPNGVTYTV---------LIDALCRAGNVDGAEQMLLEMEDKSVHPN 445
Query: 325 SAVISTIIEVNCDHRRRDGAL-LAFEYSVKM---DLNLERTAYLALIGILIKLNTFPKVA 380
S+II + + G L A +Y KM ++ Y ++ K
Sbjct: 446 VVTFSSII----NGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESAL 501
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVY 438
++ EM G + ++ LL++ L + A +F + + YT LI
Sbjct: 502 DLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGL 561
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
F G+ A K+ + + + + P +NV + L LG+ +AE
Sbjct: 562 FKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAE 606
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG + + TY T++D F + + S ++ M +G+ ++ +++ L G +
Sbjct: 473 KERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKM 532
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A ++ +M + V+YT + LF + A V +E+ +R L P+ Y V
Sbjct: 533 EEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVF 592
Query: 178 MEYLVRAGKYEEALEIF 194
+ L GK +EA I
Sbjct: 593 VNCLCMLGKSKEAESIL 609
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 128/343 (37%), Gaps = 24/343 (6%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV--QPDKAACNIL 212
A + EM +RG+P + T + L R G+ E A + M + D N L
Sbjct: 148 APALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNAL 207
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
++ CK+G+ + + M+ + + + + A E D+ +
Sbjct: 208 LDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETM----- 262
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID---SLLSGIMDKSIQLDSAVIS 329
D VE P + + + N A+D SL ++ + D +S
Sbjct: 263 --KGDGVE--------PNVVTYTTFIAECCRTN--AVDDAFSLYEEMVRMGVLPDVVTLS 310
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
+++ C R A F K+ Y LI L K + ++ E+
Sbjct: 311 ALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSR 370
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKA 447
G + + + L+ LG + +F D TYT LI AG+ D A
Sbjct: 371 GVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGA 430
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
++ M K +HP++ TF+ ++ GL K G + A Y ++ K
Sbjct: 431 EQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMK 473
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 185/443 (41%), Gaps = 27/443 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SR F D Y T++ +A++ + +M G + VTYT+++ L +GD+D
Sbjct: 3 SRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLD 62
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + ++M C P +V+YTA + L R +A K M++ G P+ TY L+
Sbjct: 63 AAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLI 122
Query: 179 EYLVRAGKYEEALEIFSK-MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A + ++A + + M E+G PD N I CKAG+ + +L M +
Sbjct: 123 HGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGI 182
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG---PLSIDQ 294
+ F + A+ D DA + +E P S+
Sbjct: 183 SPDVVTFCSIISGLCKANRID------------------DAFQVFKGMLERGCVPDSLTY 224
Query: 295 GLVLILLKKKN-LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
++L L + N L ++ +L ++ SA + +I + A A+E +++
Sbjct: 225 SIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAME 284
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+E + A IG L + FP I+ M ++G + +I L +
Sbjct: 285 AGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDD 344
Query: 414 AAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIH-PSLGTFNVL 469
A K+ + + C + LI + AG +A ++ K M K I P + T+N +
Sbjct: 345 AWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTM 404
Query: 470 LAGLEKLGRVSDAEIYRKEKKSI 492
+ G K G + A++ +E +++
Sbjct: 405 IDGQSKFGSLKQAKLLLEEMQAV 427
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M+ A L + G D TY T + +A ++ + E M GI+ D VT+
Sbjct: 131 MDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFC 190
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L A +D A +++ M + C P ++Y+ + L +R+ +V + M++
Sbjct: 191 SIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS 250
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
G TY L+ L+RAG E A + + EAG + N I C++G+
Sbjct: 251 GHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGK 306
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVS 57
M + + N K L+ A DLL +P I D N V +++ N
Sbjct: 341 MLEVLCNAEKTLE------AIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFD 394
Query: 58 R--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ + G D FTY M+ +G + +FE+M+ D VTY S+++ L G
Sbjct: 395 KMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHG 454
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D+D A +++EM+ K P + +Y+ ++ +++V+ A ++ EMI G PN TY
Sbjct: 455 DLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYN 514
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+L++ L R GK EEA +++ M++ G+ PD +IL
Sbjct: 515 ILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSIL 551
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 185/433 (42%), Gaps = 28/433 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +TY ++ ++ +S V+E M+ KG +D Y ++ L+ AG VD A
Sbjct: 123 GLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQA 182
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++E+MK K C P +YT +++ R + + EM+ +G N + ++E
Sbjct: 183 FQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEA 242
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL----RYMKENR 236
L + ++ + + SKM E QP++ +I ++ G+ + +L R+M NR
Sbjct: 243 LGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEVLDICSRFM--NR 300
Query: 237 LALRYPVFKEALQTFKVADENDSL--LWQVHPQFSPE-FIS----------DNDAVEFVT 283
Y V K ++ ++ ++ +W H + + F+S +A++ +
Sbjct: 301 SIYSYLV-KSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLH 359
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK----SIQLDSAVISTIIEVNCDHR 339
E + D G+ ++ + S +S + DK I D + +I
Sbjct: 360 MMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVG 419
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
D A FE + Y +LI L K + + +EM + G+ V+ +
Sbjct: 420 LVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYS 479
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCR 456
+LI G + + A +F + + CT TY L+ G ++A K+Y+TM +
Sbjct: 480 ILIECFGKSNKVEMACSLFDEMI-SEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQ 538
Query: 457 KGIHPSLGTFNVL 469
+G+ P T+++L
Sbjct: 539 QGLIPDSITYSIL 551
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y + G+ K++S + +F+ M+ GI D TY ++ G VD
Sbjct: 364 KGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDK 423
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E M+ C P +V+Y + + L + + EA ++KEM ++G P+ +TY++L+E
Sbjct: 424 ASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIE 483
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ K E A +F +M G P+ NIL++ + G+T + MK+ L
Sbjct: 484 CFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYETMKQQGL 541
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 178/458 (38%), Gaps = 54/458 (11%)
Query: 61 GFNHDRFTYTTMLDIF--------------------GEAKRISSMKY------------- 87
GF HD F+Y +L + G A IS++
Sbjct: 55 GFRHDAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEMER 114
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
EL + G+ + TY ++ + +V ++EEM+ K I +Y + L
Sbjct: 115 CLELASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLLDALA 174
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
V +A V+++M Q+ P+ YTYT+L+ +AG+ + L F +M G +
Sbjct: 175 KAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCVLNLI 234
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
A N +IE K +I +L M EN + L +A E Q+H
Sbjct: 235 AFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDI--LATEG-----QLHRL 287
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
N+ ++ + + SI LV L K + ++ + + + D
Sbjct: 288 --------NEVLDICSRFMN--RSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDA 337
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++EV C+ + A+ + + + Y + L KL ++ + ++M
Sbjct: 338 FVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMK 397
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSA 444
G V+ ++I G A+++F ++ E C TY +LI G
Sbjct: 398 TNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM-EASSCKPDVVTYNSLINCLGKHGDL 456
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D+A ++K M KG P + T+++L+ K +V A
Sbjct: 457 DEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMA 494
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/500 (22%), Positives = 202/500 (40%), Gaps = 33/500 (6%)
Query: 12 LKYSTWDSAQDLLKNLPIKWDSYTVNQVL-----KTHPPMEKAWLFFNWVSRSRGFNHDR 66
L+ A LL LP D+ + N VL + H A L + +
Sbjct: 56 LRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNA 115
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+YT ++ + + M+ G+ D VTY +++ L +A +VD AV + E
Sbjct: 116 VSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGE 175
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M P +V Y++ ++ + R ++ V+ EM ++G+ P+ YT L++ L + GK
Sbjct: 176 MCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK 235
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++A + M G++P+ N+LI CK G + I +L+ M E +A +
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID---QGLVLILLKK 303
++ E D +W + + I + V F + I+G I Q + + +
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV-IQGLCDIGRMRQAFQVRAMME 354
Query: 304 K-----NLVAIDSLLSG------------IMDKSIQL----DSAVISTIIEVNCDHRRRD 342
+ NLV + L+ G +MD+ L DS S +I+ C + D
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A + E Y+ L+ + + + + EM L V + +I
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMI 473
Query: 403 HRLGSARRPVPAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
H A A ++ S++ E A TY+ +I ++ +G + A + K M G
Sbjct: 474 HGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFL 533
Query: 461 PSLGTFNVLLAGLEKLGRVS 480
P + F+ L+ G G ++
Sbjct: 534 PDVAVFDSLIQGYSTKGEIN 553
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 112/242 (46%), Gaps = 6/242 (2%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+ +L+ H + KA + ++ S G D FTY+ ++ F + ++ + + M+++
Sbjct: 369 IGGLLRVHK-VRKAMELMDEMT-SLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP-TIVSYTAYMKILFLNDRVKE 154
GI + Y ++ + G ++ A N++ EM +P +V+Y+ + +K
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEMD--NNFPLDVVAYSTMIHGACKAGDLKT 484
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A ++ K ++ GL P+ TY++++ ++G E A + +M +G PD A + LI+
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
GE ++ ++R M +AL + L T VA L Q P FS E
Sbjct: 545 GYSTKGEINKVLELIREMITKNIALDSKIIS-TLSTSLVASNEGKALLQSLPDFSAEISK 603
Query: 275 DN 276
N
Sbjct: 604 GN 605
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 128/309 (41%), Gaps = 52/309 (16%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI---DAVTYTSVMHWLSNAGD 116
+G D TY T++ + + ++ E M +G NI + VT+ SV+ L + G
Sbjct: 284 KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVIQGLCDIGR 342
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A + M+ C +V+Y + L +V++A ++ EM GL P+ +TY++
Sbjct: 343 MRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSI 402
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQP-------------------------------- 204
L++ + + + A ++ S M++ G++P
Sbjct: 403 LIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNF 462
Query: 205 --DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
D A + +I CKAG+ +T +L+ + + L + + F + + ++
Sbjct: 463 PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANG 522
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ + F+ D +++ L+ K + + L+ ++ K+I
Sbjct: 523 VLKQMTASGFLPD--------------VAVFDSLIQGYSTKGEINKVLELIREMITKNIA 568
Query: 323 LDSAVISTI 331
LDS +IST+
Sbjct: 569 LDSKIISTL 577
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 90/215 (41%), Gaps = 4/215 (1%)
Query: 75 IFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+ G R+ ++ ELM E G+ D+ TY+ ++ VD A ++ M+ +
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P + Y + + ++ A +++ EM P + Y+ ++ +AG + A
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAK 486
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
E+ + + G+ PD +I+I K+G+ +L+ M + VF +Q +
Sbjct: 487 ELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY 546
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
E + +L + + D+ + ++T +
Sbjct: 547 STKGEINKVLELIREMITKNIALDSKIISTLSTSL 581
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 152/386 (39%), Gaps = 54/386 (13%)
Query: 123 IWEEMKLKECYPTI---VSYTAYMKILFLNDRVKEATDVYKEMIQRGLP---PNCYTYTV 176
+ E L + P++ VSY + L A + + M P PN +YTV
Sbjct: 61 LGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTV 120
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
LM L ++A+ + M+ AGV+ D LI C A E + ++ M E+
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ V+ LQ + S W+ V F VE IE + + G
Sbjct: 181 IEPNVVVYSSLLQGY-----CKSGRWEDVGKVF----------VEMSEKGIEPDVVMYTG 225
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQ--LDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L+ L K V G+MD ++ L+ V++ + +NC + E SVK
Sbjct: 226 LIDSLCK----VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINC---------MCKEGSVK 272
Query: 354 MDLN-LERTAYLALIGILIKLNTFPKVAEIVEEMTKA---------GHSL---GVYLGAL 400
+ L++ + + ++ NT K V EM +A G ++ V
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRK 457
+I L R A ++ +++ E+ C TY LIG KA+++ M
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMM-EETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL 391
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ P T+++L+ G K+ +V AE
Sbjct: 392 GLEPDSFTYSILIKGFCKMWQVDRAE 417
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 164/372 (44%), Gaps = 46/372 (12%)
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+R T +Y +MIQ G+ P YT+ +L++ L + + A E+F KM E G QP+K
Sbjct: 130 NRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTV 189
Query: 210 NILIEKCCKAGETRTII-LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ- 267
IL+ C+AG T+ + + M N + Y + + DE + L+ ++ +
Sbjct: 190 GILVRGFCRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKG 249
Query: 268 FSPEFISDNDAVE--------FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
P+ ++ N + F + I + +D L L K N+V + +L G +
Sbjct: 250 LLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELG---LPKPNVVTFNLMLKGFCQE 306
Query: 320 SIQLDS-AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ ++ +++ T+ ++ G ++ E +Y + L++ +
Sbjct: 307 GMMEEARSLVETM--------KKGGNFVSLE------------SYNTWLLGLLRNGKLLE 346
Query: 379 VAEIVEEMTKAGHSLGVYL------GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT 432
+++EM + G +Y G H + ARR + + P+ T TYT
Sbjct: 347 GRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPD----TVTYT 402
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKK 490
L+ Y S G +A I M RKG HP+ T N LL L K GR S+AE + + +K
Sbjct: 403 TLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEK 462
Query: 491 SIQADALSKDAV 502
S Q D ++ + V
Sbjct: 463 SYQLDTVTCNIV 474
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 173/449 (38%), Gaps = 57/449 (12%)
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ V + M E GI + +Y VM L + A + + M YP V+YT +
Sbjct: 348 RSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHG 407
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+V EA + EMI++G PN YT L+ L + G+ EA E+ KM E Q D
Sbjct: 408 YCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLD 467
Query: 206 KAACNILIEKCCKAGETRTIILILRYM---------KENRLA----------------LR 240
CNI++ C+ GE ++ M KEN +A +
Sbjct: 468 TVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVIT 527
Query: 241 YPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFIS-DNDAVEF-----------VTTDIE 287
Y L + K+ + + + P+ ++ D + F V D+E
Sbjct: 528 YTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDME 587
Query: 288 -----GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD-HRRR 341
L L+L L K + + L+ + ++ I D + +I C+ + +
Sbjct: 588 RNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTK 647
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE-EMTKAGHSLGVYLGAL 400
D L E K ++ +++ LI K F E+ + ++ GH +Y +L
Sbjct: 648 DATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALY--SL 705
Query: 401 LIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
+ + L + + A ++F SLL ++ Y LI G D A + + +
Sbjct: 706 MFNELLAGGKLSDAKELFEASLERSLLSKN----FMYEDLIDKLCKDGRLDDAHGLLQKL 761
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
KG +F ++ GL K G A+
Sbjct: 762 IDKGYCFDHSSFIPVIDGLSKRGNKQQAD 790
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 98/195 (50%), Gaps = 4/195 (2%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TYTT+++ + ++ K F M K ++ D+VTY + + G + A+ +
Sbjct: 524 DVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVL 583
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M+ C T+ +Y + + L ++ E + EM +RG+ P+ TY ++ L
Sbjct: 584 KDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEG 643
Query: 185 GKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKAGETRT---IILILRYMKENRLALR 240
GK ++A + +M + G V P+ ++ ILI+ CK+G+ + + + + ++ AL
Sbjct: 644 GKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALY 703
Query: 241 YPVFKEALQTFKVAD 255
+F E L K++D
Sbjct: 704 SLMFNELLAGGKLSD 718
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 109/532 (20%), Positives = 201/532 (37%), Gaps = 71/532 (13%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
+ + + + D A++L + K + +TV +++ + +V G N
Sbjct: 158 IQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDGKMGGNV 217
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV------- 117
+R Y T++ F + + + E M EKG+ D VT+ S + L AG V
Sbjct: 218 NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIF 277
Query: 118 -----DG---------------------------AVNIWEEMKLKECYPTIVSYTAYMKI 145
DG A ++ E MK + ++ SY ++
Sbjct: 278 RDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLG 337
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L N ++ E V EM++ G+ PN Y+Y ++M+ L R +A + M GV PD
Sbjct: 338 LLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPD 397
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRL--------ALRYPVFKEALQTFKVADEN 257
L+ C G+ IL M L ++KE ++ E
Sbjct: 398 TVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKS-----EA 452
Query: 258 DSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL-------LKKKNLVAI 309
+ +L +++ + + + ++ N V + + G L +V + L K+N VA
Sbjct: 453 EEMLQKMNEKSYQLDTVTCNIVVNGLCRN--GELEKASEVVSEMWTDGTNSLGKENPVA- 509
Query: 310 DSLLSGIMDKSIQL-DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
L++ I + S + D +T+I C + + A F + +L+ + Y +
Sbjct: 510 -GLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVL 568
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
K ++++M + G S + LI LGS + + + E
Sbjct: 569 NFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHP 628
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKG-IHPSLGTFNVLLAGLEKLG 477
TY +I G A + M KG + P++ +F +L+ K G
Sbjct: 629 DICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSG 680
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++ + D TY T + F + +ISS V + M+ G + TY S++ L + G +
Sbjct: 553 AKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIF 612
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVL 177
+ +EM+ + +P I +Y + L + K+AT + EM+ +G + PN ++ +L
Sbjct: 613 EMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKIL 672
Query: 178 MEYLVRAGKYEEALEIF 194
++ ++G ++ A E+F
Sbjct: 673 IKAFCKSGDFKVACELF 689
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 170/449 (37%), Gaps = 42/449 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N + +T+ ++ E+ + + +F+ M EKG + T ++ AG A
Sbjct: 146 GVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQA 205
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + + K+ +V Y + D EA + + M ++GL P+ T+ +
Sbjct: 206 LE-FVDGKMGGNVNRVV-YNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISA 263
Query: 181 LVRAGKYEEALEIFSKMQEAG----VQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L RAGK EA IF MQ G +P+ N++++ C+ G ++ MK+
Sbjct: 264 LCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGG 323
Query: 237 LALRYPVFKE----ALQTFKVADENDSLLWQVHPQFSPEFISDN-------------DAV 279
+ + L+ K+ + L V P S N DA
Sbjct: 324 NFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDAR 383
Query: 280 EFVTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ + + D LL K + ++L+ ++ K ++ +T++
Sbjct: 384 RLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSL 443
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM-TKAGHSLG 394
R+ A + + L+ ++ L + K +E+V EM T +SLG
Sbjct: 444 WKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLG 503
Query: 395 VYLG-ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
A L++ + + VP TYT LI G ++A K +
Sbjct: 504 KENPVAGLVNSIHNVSTNVPDV-------------ITYTTLINGLCKVGKLEEAKKKFIE 550
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M K +HP T++ + K G++S A
Sbjct: 551 MMAKNLHPDSVTYDTFVLNFCKQGKISSA 579
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGD 116
R RG + D TY M++ E + + M +KG ++ + ++ ++ +GD
Sbjct: 622 RERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGD 681
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
A ++ ++ L C Y+ L ++ +A ++++ ++R L + Y
Sbjct: 682 FKVACELF-DVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYED 740
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
L++ L + G+ ++A + K+ + G D ++ +I+ K G + + R M+
Sbjct: 741 LIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIME 797
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 188/464 (40%), Gaps = 35/464 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY TM+ + + ++ F L++E G+ +D T +++ GD+ A
Sbjct: 178 GLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKA 237
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ M L C SYT ++ L V+EA + M+Q G PN +TYT+L+
Sbjct: 238 CWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRG 297
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
L + G+ +A + +M GV P N +I+ CK+G + + I M+ N
Sbjct: 298 LCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPD 357
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS-------------DNDAVEFVTT 284
Y L K + + L + FSP I+ +DA+ +
Sbjct: 358 DWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSI 417
Query: 285 DIEGPLSIDQG----LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
I +D L+ +L+KK L L+ I + + + ++II+ C +
Sbjct: 418 MISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGK 477
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
AL F+ + Y +LI LI+ K ++ +M + G + GV
Sbjct: 478 VGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTT 537
Query: 401 LI------HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
LI H +A R + L P++Q Y L +G A++A Y +
Sbjct: 538 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ----AYNVLTDALCKSGRAEEA---YSFL 590
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRV--SDAEIYRKEKKSIQADA 496
+KG+ + T+ L+ G K G + A I + + +AD+
Sbjct: 591 VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADS 634
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 162/422 (38%), Gaps = 56/422 (13%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RGF+ T+T +++ + +A++I V +M +D Y ++ L +
Sbjct: 385 ARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLK 444
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + E+ P +V YT+ + +V A +V+K G PN +TY+ L+
Sbjct: 445 EAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLI 504
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L++ K +A+ + +KMQE G+ P LI+ CK E + M++N L
Sbjct: 505 YGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLT 564
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y V +AL A+E S L + + VT
Sbjct: 565 PDEQAYNVLTDALCKSGRAEEAYSFL-----------VKKGVVLTKVTY---------TS 604
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
LV K N +L+ ++++ + DS S +++ C ++ + AL +
Sbjct: 605 LVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRG 664
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ AY +I +IK + EM +GH P+A
Sbjct: 665 VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHK--------------------PSA 704
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
TYT I Y G ++A + M R G+ P + T+NV + G
Sbjct: 705 -------------ITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGH 751
Query: 476 LG 477
+G
Sbjct: 752 MG 753
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 148/349 (42%), Gaps = 12/349 (3%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
+ A+ F + ++ G D Y + D ++ R + + +KG+ + VTYTS
Sbjct: 549 DNAFRLFEMMEQN-GLTPDEQAYNVLTDALCKSGRAEE---AYSFLVKKGVVLTKVTYTS 604
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ S AG+ + A + E+M + C +Y+ ++ L ++ EA + +M RG
Sbjct: 605 LVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRG 664
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ N YT+++ +++ GK++ A +F++M +G +P + I CK G
Sbjct: 665 VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAG 724
Query: 227 LILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVE-F 281
++ M+ N +A + Y VF D S L + + P + + ++ F
Sbjct: 725 HLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHF 784
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+ + +D + +K L + LL ++ + + S+II C R
Sbjct: 785 LKMSLANAHYVDTSGMWNWIK---LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRL 841
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ A + ++ + D++ Y LI + F K A V M + G
Sbjct: 842 EEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECG 890
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 94/503 (18%), Positives = 192/503 (38%), Gaps = 52/503 (10%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPME--KAWLFFNWVSRSR 60
D ++ + +++ W+ + + P ++ + P++ A FF WV+R
Sbjct: 25 DIVAELGRVISTRRWNKGRAYKRLAPFVTAAHVADLFRAPVAPLDPATALAFFEWVARRP 84
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSM-KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
GF H ++ +L + + ++ K V ++ G D + + AG
Sbjct: 85 GFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMREAVDAIQAIRRAGGKRL 144
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++ +CY ++ L D + +Y +++Q GL P+ TY ++
Sbjct: 145 ALS-------PKCY------NLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIM 191
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT---IILILRYMKENR 236
+ G A F ++E+G++ D CN L+ C+ G+ R +++++ M R
Sbjct: 192 AYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRR 251
Query: 237 LALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y + + L +T V + LL + SP + + + EG + D
Sbjct: 252 NEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCK--EGRIH-DAR 308
Query: 296 LVLILLKKKNLV----AIDSLLSGIMDKSIQLDSAVISTIIEVN-CD------------- 337
++L + ++ +V ++++ G D+ I T++E N C+
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL 368
Query: 338 -HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ D A ++ + + +I K + M + L +
Sbjct: 369 CGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQ 428
Query: 397 LGALLI------HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
+LI HRL A+ + L P YT++I Y G AL++
Sbjct: 429 AYGVLISVLIKKHRLKEAKDTLNEIFANGLSPN----VVIYTSIIDAYCKVGKVGAALEV 484
Query: 451 YKTMCRKGIHPSLGTFNVLLAGL 473
+K +G P+ T++ L+ GL
Sbjct: 485 FKLTEHEGCRPNAWTYSSLIYGL 507
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ G + +TY++++ + +++ + MQE GI +TYT+++
Sbjct: 487 LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 546
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ D A ++E M+ P +Y L + R +EA Y ++++G+ TYT
Sbjct: 547 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVKKGVVLTKVTYT 603
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L++ +AG E A + KM G + D ++L++ CK + + IL M
Sbjct: 604 SLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQM 660
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
++ ++ + E M + G+N AVTY+S++ A ++ A + + M K+ P YT
Sbjct: 805 KLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYT 864
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+K ++A MI+ G P+ +Y L+ L G Y++A +F + E
Sbjct: 865 MLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEM 924
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
++ A IL + KAG +L M ENR
Sbjct: 925 DYNHNEVAWKILNDGLLKAGHVDICSQLLSAM-ENR 959
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 7/223 (3%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
W+SA+ LLK + +K SY +++L + +KA+ + S G DR Y
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQAS-GVRPDRHFYN 408
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
M+D FG+ + F M+E+GI D VT+ +++ G D A ++EEM+
Sbjct: 409 VMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRES 468
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P +Y + +L + + + EM ++GL PN TYT L++ R+G+Y+EA
Sbjct: 469 NCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEA 528
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
++ M+ G++P + L+ + G +I MK
Sbjct: 529 IDCIEAMKADGLKPSPTMYHALVNAYAQRGLRPDVITYTTLMK 571
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 167/425 (39%), Gaps = 61/425 (14%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
++E + DA ++ ++ + A D A+ + + P + TA + L R
Sbjct: 219 LRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGR 278
Query: 152 VKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
V EA ++ E G + P Y L++ VR + A ++ +M + GV PD+A +
Sbjct: 279 VAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYS 338
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ----VHP 266
+L++ +AG + ++L+ M+ + + VF L F+ D D WQ V
Sbjct: 339 LLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR--DRGD---WQKAFAVLR 393
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLD 324
+ + + V D G K N + A+D+ + + ++ I+ D
Sbjct: 394 EMQASGVRPDRHFYNVMIDTFG--------------KYNCLGHAMDA-FNKMREEGIEPD 438
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+T+I+ +C R D A FE + + T Y +I +L + + V ++
Sbjct: 439 VVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLS 498
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSA 444
EM + G L+P TYT L+ VY +G
Sbjct: 499 EMKEQG-----------------------------LVPN----IITYTTLVDVYGRSGRY 525
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS-IQADALSKDAVP 503
+A+ + M G+ PS ++ L+ + G D Y K+ I+ + K V
Sbjct: 526 KEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVI 585
Query: 504 MEEKI 508
EE I
Sbjct: 586 YEEMI 590
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D + A R S + + + M+ G+ + ++ ++ + GD A
Sbjct: 329 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKA 388
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P Y + + + A D + +M + G+ P+ T+ L++
Sbjct: 389 FAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDA 448
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ G+++ A E+F +M+E+ P NI+I + + +L MKE L
Sbjct: 449 HCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGL 505
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 4/206 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWL--FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
S+ + +L T P + A L + SR D ++ ++ F A + +
Sbjct: 194 SHLLASLLNTRDPPDAALLERLLGDLRESR-LEPDAPLFSDLISAFARAALPDAALELLA 252
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLN 149
Q G+ + T+++ L AG V A ++ E L E P +Y A +K
Sbjct: 253 SAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRI 312
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+K A V EM Q G+ P+ TY++L++ RAG++E A + +M+ GV+P
Sbjct: 313 ASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVF 372
Query: 210 NILIEKCCKAGETRTIILILRYMKEN 235
+ ++ G+ + +LR M+ +
Sbjct: 373 SRILAGFRDRGDWQKAFAVLREMQAS 398
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 159/402 (39%), Gaps = 37/402 (9%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M KG D TY+ V+ L NA VD A ++EEMK P + +YT +
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+++A + EM++ G PN TYT L+ ++A K A E+F M G P+
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
LI+ CK+G+ I M+ N + FK+ D N
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGN------ADIPDVDMYFKIDDGN-------------- 630
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
I D + + LV L K + LL + + + + V +
Sbjct: 631 -IRDPNIFTY------------GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ C + D A + F + Y +LI L K +++ M +
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKAL 448
+ V + +I L + A ++ S++ E++ C TYTA+I + AG DK L
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMM-EEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
++ + M KG P+ T+ VL+ G + DA E K
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 161/398 (40%), Gaps = 17/398 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ R TY ++ +F EA R+ + V M + G N+D T +H L AG A
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + E+ + K T++ YT + L +EA D M PN TY +L+
Sbjct: 287 LALIEKEEFK--LDTVI-YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+R + I S M G P + N LI C++G+ +L+ M +
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403
Query: 241 YPVFKEALQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y V+ + ++ SL + ++ + E + + + V L
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNV---------SNLARC 454
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L S++ +M K D++ S +I + C+ + D A L FE + +
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI K+ + + +EM + G + V LIH AR+ A ++F
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574
Query: 420 LLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTM 454
++ + C TYTALI + +G +KA +IY M
Sbjct: 575 MMLS-EGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 204/538 (37%), Gaps = 85/538 (15%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLF---FNWVSRSRGFNH 64
V+ + K W A L++ K D+ Q++ + +A LF +++SR R +
Sbjct: 274 VHLLCKAGRWREALALIEKEEFKLDTVIYTQMISG---LCEASLFEEAMDFLSRMRSSSC 330
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ TY +L +++ K + +M +G + S++H +GD A
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKE------ATDVYKEMIQRGLPPNCYTYTV 176
+ ++M C P V Y + + N+++ A Y EM+ + N +
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L L AGK+E+A I +M G PD + + +I C A + L+ MK N
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 237 LALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + + +F KV LL Q F E + D A VT
Sbjct: 511 VVPDVFTYTILIDSFCKVG-----LLQQARKWFD-EMVRDGCAPNVVTY---------TA 555
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC------------------- 336
L+ LK + + + + L ++ + + + +I+ +C
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615
Query: 337 ------------DHRRRD------GAL---LAFEYSVKMDLNL-----------ERTAYL 364
D RD GAL L + VK +L Y
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
ALI K+ + + +M++ G+ VY + LI RL +R A K+ S + E+
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735
Query: 425 QKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
C YT +I G D+A ++ M KG HP++ T+ ++ G K G+V
Sbjct: 736 S-CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y ++D F + ++ + VF M E+G + TY+S++ L +D A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + M C P ++ YT + L + EA + M ++G PN TYT +++
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AGK ++ LE+ +M G P+ +LI CC AG +L MK+
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 241 YPVFKEALQTF 251
+++ ++ F
Sbjct: 846 MAGYRKVIEGF 856
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY ++D +A ++ + + ++M +G + + Y +++ G +D A ++ +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + P + +Y++ + LF + R+ A V M++ PN YT +++ L + GK
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+EA + S M+E G P+ +I+ KAG+ + ++R M A + ++
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816
Query: 247 ALQTFKVA---DENDSLLWQVHPQFSPEFIS 274
+ A D+ LL ++ + P+ ++
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A + F +S RG+ + +TY++++D + KR+ V M E + + YT
Sbjct: 687 LDEAQMVFTKMSE-RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G D A + M+ K C+P +V+YTA + +V + ++ ++M +
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY VL+ + AG ++A ++ +M++ A +IE G R
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE-----GFNREF 860
Query: 226 IL---ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
I+ +L + EN P ++ + +F A + L ++H + S
Sbjct: 861 IISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLE-LALELHKEMS 906
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Query: 81 RISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
R M+ VFEL E +GI+ D +TY++V++ LS G+V+ A+ + +M L+ C P +
Sbjct: 255 REHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVH 314
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
++T+ MK F+ R+ EA D++ MIQ G PN Y L+ L GK EA+ + KM
Sbjct: 315 TFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKM 374
Query: 198 QEAGVQPDKAACNILIEKCCKAGE 221
+ GV P++ + LI+ KAG+
Sbjct: 375 ERNGVFPNETTYSTLIDGFAKAGD 398
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 112/517 (21%), Positives = 216/517 (41%), Gaps = 58/517 (11%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
+T + Q+ K+L + +S +N+ LK P + A FF ++ S F H TYTTM+
Sbjct: 23 NTINPLQNEQKDLNLLKESEVLNK-LKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIK 81
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
G + I ++Y+ +LM+ +GI+ + + V++ AG + A+ + + C P
Sbjct: 82 RLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKP 141
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
++ Y + L ++ + +Y M + G+ N YTY +L++ L + + + A ++
Sbjct: 142 SVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLL 201
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEALQTF 251
++M G PD + ++ C+ G E R + + R+ PV+ + F
Sbjct: 202 AEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSM--------RIKSFVPVYNALINGF 253
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT--------DIEGPLSIDQGLVLILLK- 302
+ ++++ + + E I D D + + T ++E L++ L + L+
Sbjct: 254 -CREHKMEEVFELFNEMAVEGI-DPDVITYSTVINTLSEMGNVEMALAV---LAKMFLRG 308
Query: 303 -KKNLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
N+ SL+ G ++ + + ++ +T+I C + + +
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGK---MV 365
Query: 346 LAFEYSVKMDLN---LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A S KM+ N T Y LI K +EI +M G V + ++
Sbjct: 366 EAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMV 425
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L A + + + C T T+ I +G + A+K+ M + G
Sbjct: 426 DVLCRNSMFNHALHLIENMA-NGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGC 484
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA-----EIYRKEKKS 491
P++ T+N +L GL R +A EI E KS
Sbjct: 485 APNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKS 521
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y T++ ++ V + M+ G+ + TY++++ + AGD+ GA
Sbjct: 343 GSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGA 402
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
IW +M C P +V YT + +L N A + + M PPN T+ ++
Sbjct: 403 SEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKG 462
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +GK E A+++ ++M++ G P+ N +++ A TR + I+ ++E +
Sbjct: 463 LCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSN 522
Query: 241 YPVFKEALQTF 251
+ L F
Sbjct: 523 LVTYNTILSGF 533
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT M+D+ + ++ E M + +T+ + + L +G + A+ + +M+
Sbjct: 421 YTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMR 480
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
C P + +Y + LF R +EA + E+ + + N TY ++ AG ++
Sbjct: 481 QYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFK 540
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
AL+I K+ G +PD N +I CK GE +T I
Sbjct: 541 GALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAI 578
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+T++D F +A + ++ M G + V YT ++ L + A+++ E M
Sbjct: 385 TYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENM 444
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C P +++ ++K L + + + A V +M Q G PN TY +++ L A +
Sbjct: 445 ANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRT 504
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
EAL+I +++E ++ + N ++ C AG
Sbjct: 505 REALQIVGEIEEMEIKSNLVTYNTILSGFCHAG 537
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + TY +LD AKR + ++E I + VTY +++ +AG
Sbjct: 480 RQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMF 539
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP-PNCYTYTV 176
GA+ I ++ + P ++Y + VK A + + ++G P+ +TYT
Sbjct: 540 KGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTS 599
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L+ + +EA+ KM G+ P++A N L+
Sbjct: 600 LLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALV 636
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 117/521 (22%), Positives = 202/521 (38%), Gaps = 53/521 (10%)
Query: 3 DTISNVYKILKYSTWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
DTIS +++ W + Q+ ++NL +D V VL E A FF WV R+
Sbjct: 81 DTIS---RMMANRPWTTRLQNSIRNLVPHFDHSLVYNVLHAARNSEHALQFFRWVERAGL 137
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F +DR T+ +++I G A +++ + + M +KG+ D + ++ AG V AV
Sbjct: 138 FKNDRDTHMKIIEILGRASKLNHARCILLDMPKKGVEWDEYMFVVLIESYGKAGIVQEAV 197
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
I+ +M +I SY A K++ R A V+ +M+ G+ P +TY +++
Sbjct: 198 KIFNKMNELGVERSIKSYDALFKVILRRGRYMMAKRVFNKMLNDGIQPTRHTYNIMLWGF 257
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+ + E A+ + M+ G+ PD N +I + + + MK +A
Sbjct: 258 FLSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTV 317
Query: 242 PVFKEALQTFKVADENDSLL--------WQVHPQ---FSPEFISDNDA----------VE 280
+ ++ + D D L + + P +S DA +E
Sbjct: 318 ISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIE 377
Query: 281 FVTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
V + D + L LL K +L A + +L+ +M I ++ +IE C
Sbjct: 378 MVARHLAPK---DNSIFLRLLSCQCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFC 434
Query: 337 DHRRRDGALLAFEYSVKMD--------LNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
D A+ + ++ + L +E AY +I L K ++ K
Sbjct: 435 KAEEYDRAVKYLDKLIEKEIILRPQSTLEIESNAYNPMIQYLCSHGQTGKAEIFFRQLMK 494
Query: 389 AGHSLGVYLGALLIHRLGSARRPVP--AAKIFSLL-----PEDQKCTATYTALIGVYFSA 441
G + L+ G A+ P A +IF ++ P D Y +I Y
Sbjct: 495 KGVQDPLAFNNLIC---GHAKEGYPDSAFEIFKIMGKRGVPRD---ADAYRLIIESYLRK 548
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G A M G P F ++ L + GRV A
Sbjct: 549 GEPADAKTALDGMLEDGHVPDPSVFRSVMESLFEDGRVQTA 589
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 175/426 (41%), Gaps = 47/426 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G R TY ML F + R+ + ++ M+ +GI+ D VTY ++++ ++ A
Sbjct: 242 GIQPTRHTYNIMLWGFFLSLRLETAMRFYDDMKNRGISPDVVTYNTMINGFYRFKKMEEA 301
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EMK K PT++SYT +K DRV + + +EM + PN +TY+ L+
Sbjct: 302 EKLFVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPG 361
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC-CKAGETRTIILILRYMKENRLAL 239
L A K EA +I +M + P + + + C CKAG+ R +L M +
Sbjct: 362 LCDAWKMTEAKDILIEMVARHLAPKDNSIFLRLLSCQCKAGDLRAAEDVLNTMMRLHIPT 421
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ ++ F A+E D AV+++ IE I
Sbjct: 422 EAGHYGVLIENFCKAEEYDR------------------AVKYLDKLIEKE---------I 454
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+L+ ++ +++++S + +I+ C H + A + F +K + +
Sbjct: 455 ILRPQS--------------TLEIESNAYNPMIQYLCSHGQTGKAEIFFRQLMKKGVQ-D 499
Query: 360 RTAYLALIGILIKLNTFPKVA-EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
A+ LI K +P A EI + M K G L+I P A
Sbjct: 500 PLAFNNLICGHAK-EGYPDSAFEIFKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTAL 558
Query: 419 SLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ ED + + +++ F G A ++ K+M KG+ ++ +L L
Sbjct: 559 DGMLEDGHVPDPSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMR 618
Query: 477 GRVSDA 482
G V +A
Sbjct: 619 GHVEEA 624
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 194/492 (39%), Gaps = 74/492 (15%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH---DRFTYTTMLD 74
D A L+ ++P+ D+YT N VLK + K W + N + T+ T +
Sbjct: 175 DDALRLIASMPVAPDTYTYNTVLKGLC-IAKKWEEAEELMAEMIRNRCPPNEVTFATQIR 233
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
F + + + + M G D V Y+++++ S G VD A+++ M C P
Sbjct: 234 SFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKP 290
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
V Y A +K L + +R ++ ++ EM+++G PN T+++L+ L + + A+E+
Sbjct: 291 NTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVL 350
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+M++ G +PD NI+I + G + +L M AL F L+ F A
Sbjct: 351 EQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALG---FNAVLKGFCRA 407
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK----------KK 304
+ W + + D+ + +T +I GLV +
Sbjct: 408 ER-----WHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTP 462
Query: 305 NLVAIDSLLSGIMDK-----SIQL--------DSAVISTIIEVNCDHRRRDGALLAFEYS 351
++V SLL+G ++ +IQL D + +++ C R + A
Sbjct: 463 DIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEM 522
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
V D + LI L + + E++E+M G + ++
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIF--------------- 567
Query: 412 VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
TY ALI + G D ALK+ TM K P ++N L
Sbjct: 568 ------------------TYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLK 606
Query: 472 GLEKLGRVSDAE 483
GL + R DAE
Sbjct: 607 GLCRAERWQDAE 618
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAW-----LFFNWVSRSRGFNHDRFTYTTMLD 74
A L +++P K D ++ N VLK + W L V + N T+ +++
Sbjct: 483 AIQLFRSMPCKPDIFSYNAVLKGLCRAAR-WEDAGELIAEMVGKDCPPNE--VTFNILIN 539
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + V E M G D TY ++++ S G +D A+ + M C P
Sbjct: 540 SLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS---CKP 596
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV--RAG 185
+SY + +K L +R ++A ++ EM++ PN T+ L+ RAG
Sbjct: 597 DAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRAG 649
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 146/394 (37%), Gaps = 77/394 (19%)
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
N TYT L++ R+G+ ++AL + + M V PD N +++ C A + ++
Sbjct: 157 NVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELM 213
Query: 230 RYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEFISDNDAVEFVT--T 284
M NR F +++F + D LL Q+ P + D V + T
Sbjct: 214 AEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQM-----PRYGCTPDVVIYSTLIN 268
Query: 285 DIEGPLSIDQGLVLI--LLKKKNLVAIDSLLSGI----------------MDKSIQLDSA 326
+DQ L L+ +L K N V ++ L G+ + K + A
Sbjct: 269 GFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEA 328
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
S +I C + D A+ E K + Y +I L + ++ M
Sbjct: 329 TFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSM 388
Query: 387 TKAGHSLG---VYLGALLIHRLGSA--------RRPVP---------------------A 414
+LG V G R A R P A
Sbjct: 389 VCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYA 448
Query: 415 AKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
++F +P +CT TY++L+ + G + A++++++M K P + ++N +L
Sbjct: 449 TQVFEQMPR-YRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLK 504
Query: 472 GLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
GL + R DA + A+ + KD P E
Sbjct: 505 GLCRAARWEDA-------GELIAEMVGKDCPPNE 531
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 191/444 (43%), Gaps = 26/444 (5%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+T M+ + ++ V M+++ + D VT+ ++ AGDVD A+ + +
Sbjct: 158 YTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDS 217
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K P IV++ + +K L + R +A +V++ M Q + P+ ++ +L+ R G+
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGE 277
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEA++ + +MQ+ GV PD + + LI G+ LR MK L ++
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ F A L + E + + VT + L+ L K+ L
Sbjct: 338 VIGGFCRAGSMSEAL-----RVRDEMVGLGCLPDVVTYNT---------LLNGLCKQHRL 383
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+ + LL+ + ++ + D +T+I C + AL F+ + L + AY +L
Sbjct: 384 LDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSL 443
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL-GSARRPVPAAKIFSLLPE-- 423
I + + K E+ ++M H+ ++ + L S + F L E
Sbjct: 444 IDGMCRKGDLAKANELWDDM----HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMV 499
Query: 424 ---DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+ TY ++I Y +G+ K + + M + I P L TFN L+ G K +
Sbjct: 500 SKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMH 559
Query: 481 DA-EIYR-KEKKSIQADALSKDAV 502
A ++ EK+ +Q DA++ + +
Sbjct: 560 GAFNVFNIMEKEMVQPDAVTYNMI 583
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 112/225 (49%), Gaps = 8/225 (3%)
Query: 4 TISNVYK-ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTH---PPMEKAWLFFNWV 56
T ++V K + K+ +D A+++ + + + D + N ++ +E+A F+ +
Sbjct: 229 TFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEM 288
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+ RG D +++ ++ +F ++ M+ G+ D V YT V+ AG
Sbjct: 289 QQ-RGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A+ + +EM C P +V+Y + L R+ +A ++ EM +RG+ P+ T+T
Sbjct: 348 MSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTT 407
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L+ R G +E+AL++F + ++PD A N LI+ C+ G+
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 175/439 (39%), Gaps = 42/439 (9%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G T+ ++L + +R K VF M + + D ++ ++ G+V+
Sbjct: 220 NKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVE 279
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++EM+ + P +VS++ + + ++ A +EM GL P+ YT+++
Sbjct: 280 EAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVI 339
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
RAG EAL + +M G PD N L+ CK +L MKE +
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Query: 239 -------------LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
R F++ALQ F D+LL H + P+ ++ N
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLF------DTLL---HQRLRPDVVAYNS-------- 442
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
L+ + +K +L + L + + I + S +I+ +C+ + + A
Sbjct: 443 ----------LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+ V Y ++I + K + +++M + + LIH
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552
Query: 406 GSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A +F+++ ++ Q TY +I + G+ ++A +++K M GI P
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDR 612
Query: 464 GTFNVLLAGLEKLGRVSDA 482
T+ L+ G G +A
Sbjct: 613 YTYMSLINGHVTAGNSKEA 631
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG D T+TT++ + +F+ + + + D V Y S++ + GD+
Sbjct: 394 KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDL 453
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +W++M +E +P V+Y+ + +V+EA EM+ +G PN TY +
Sbjct: 454 AKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
++ R+G ++ + KM + + PD N LI
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIH 550
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Query: 31 WDSYTVNQVLKTH-------------PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
WD ++ H +E+A+ F + + S+G + TY +++ +
Sbjct: 460 WDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMV-SKGNLPNIMTYNSIIKGYC 518
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ + + + M + I D +T+ +++H ++ GA N++ M+ + P V
Sbjct: 519 RSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAV 578
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + ++EA V+K+M G+ P+ YTY L+ V AG +EA ++ +M
Sbjct: 579 TYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEM 638
Query: 198 QEAGVQPD 205
G PD
Sbjct: 639 MHRGFAPD 646
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 186/461 (40%), Gaps = 30/461 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D TY +++ F + R+ + F M+ +G+ + VT+++ + G V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ ++ +M+++ +YT + R+ +A + EM+++G+P N TYTVL
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L + K EA ++ M++AGV+ ++ LI + + +L MK L
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429
Query: 238 ALR---YPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSID 293
L Y + L DE SLL ++ P +I ++ + P +I
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI- 488
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
++L I+D Q + +I+ C D A+ F
Sbjct: 489 -----------------AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG-VYLGALLIHRLGSARR-- 410
+ L+ AY AL+ L K + ++ EM G SL V ALL L
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591
Query: 411 --PVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
+ A I S L D C YT I + + +A +++ M GI P +N
Sbjct: 592 AFALKAKMIDSGLQLDLFC---YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648
Query: 469 LLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKIC 509
L++ +KLG + +A + E + + D +C
Sbjct: 649 LISKYQKLGNLEEAISLQDEMERVLPSCTDSDTATDAGSVC 689
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 178/423 (42%), Gaps = 26/423 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FT+ ++D + ++ + +F M+E G D VT+ S++ G++D + EE
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M+ C +V+Y A + R++ A + M + G+ N T++ ++ + G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR---YPV 243
EA+++F++M+ G+ ++ LI+ CKAG I++L M + L Y V
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 244 FKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+ L + KVA+ D L + N+ + TT I G
Sbjct: 369 LVDGLCKERKVAEAEDVLRM-----MEKAGVRANELL--YTTLIHGH-----------FM 410
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
KN LLS + +K ++LD ++ +I+ C+ + D A + L
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++ K P+ +++++ +G V LI L A A F+ +
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530
Query: 423 E---DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ D A YTAL+ G ++A++++ M KG+ + LL G K G +
Sbjct: 531 DLGLDPNVQA-YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589
Query: 480 SDA 482
DA
Sbjct: 590 HDA 592
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 100/503 (19%), Positives = 199/503 (39%), Gaps = 72/503 (14%)
Query: 44 PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINID--- 100
P A L + ++R R + H R + ++ + +R + +L+ + +
Sbjct: 63 PSTAHACLAAHLLARDRLYAHSRRVLSRLVAL----RRPHLAASLVDLLHRAALALGPRR 118
Query: 101 ---AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
A +++ L++ G +D AV ++ P + ++ + DR +
Sbjct: 119 SALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCN-HILLRLARDR---SGR 174
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE--- 214
+ + + ++ PN +T+ +++++L + G+ EA +FS+M+E G PD N LI+
Sbjct: 175 LVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234
Query: 215 KC-----------------CKAGETRTIILILRYMKENRLALRYPVFKE----------- 246
KC CKA LI + K R+ Y F
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV-TTDIEG----------------- 288
TF A + L+ + F+ + EF T I+G
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354
Query: 289 -----PLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
PL++ VL+ L K++ + + +L + ++ + + +T+I + ++
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG-VYLGAL 400
+ AL L L+ + Y ALI L ++ + ++ +M ++G + +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474
Query: 401 LIHRLGSARRPVPAAKIFSLLPED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ S + P A + +L Q TY ALI AGS D+A+ + M G+
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA 482
P++ + L+ GL K G +++A
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEA 557
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 174/441 (39%), Gaps = 28/441 (6%)
Query: 45 PMEKAWLFFNWVS-----RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
P+ KA L + +SRG N + ++ A R+ V+ M +
Sbjct: 89 PLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPP- 147
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D +TYT ++H LS AG + AV + +EM P + T ++ L L DRV +A ++
Sbjct: 148 DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 207
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE-IFSKMQEAGVQPDKAACNILIEKCCK 218
+EM+ RG+ N TY+ L++ L + + +EA+ + ++ G PD + +I+ CK
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCK 267
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
AG R + I M A+ Y DE LL ++ + DN A
Sbjct: 268 AGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM--------VDDNCA 319
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+ +T L+ K L L ++ + D +++++ C
Sbjct: 320 PDVITYTT---------LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 370
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R + AL E + Y ++ K N K E+V + G
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSA----GSADKALKIYKTM 454
+L+ A R A + L + T A+ + A G D A++ Y+ M
Sbjct: 431 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490
Query: 455 CRKGIHPSLGTFNVLLAGLEK 475
++G P+ TF ++ L K
Sbjct: 491 IQRGYVPAAATFATVVFALCK 511
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A ++R RG +TY ++D + ++ ++ + + + +G + VTY
Sbjct: 373 MEDALELLEEITR-RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYN 431
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
++ AG D A+ +++ + C ++ Y + L + R +A Y+EMI
Sbjct: 432 ILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 491
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
QRG P T+ ++ L +A + ++A E+ +M + G P C+ ++ C+AG
Sbjct: 492 QRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 548
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 183/450 (40%), Gaps = 36/450 (8%)
Query: 61 GFNHDRFTYTTML-DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G+ D T+ +L + AK + + ++++G++ D V +++ L +A D
Sbjct: 5 GYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTT 64
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK---EATDVYKEMIQRGLPPNCYTYTV 176
A+ ++++M V++T Y ++ + + EA + +M RG+ P + V
Sbjct: 65 AMALFDKMA----ELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
++ L RAG+ AL ++ +M +A PD L+ KAG R + +L+ M R
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR 179
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+Q+ + D D V E + A +T L
Sbjct: 180 HVPDNTTLTVVVQSLCLGDRVDDARELVE-----EMLHRGMAANAITY---------SAL 225
Query: 297 VLILLKKKNL-VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
V L K + L A+ LL + + D ST+I+ C R A+ FE +M
Sbjct: 226 VDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMS 282
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
Y +LIG + + ++ +M + V L+ R A
Sbjct: 283 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAY 342
Query: 416 KIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++F + ++ T+T+L+ G + AL++ + + R+G P++ T+N ++ G
Sbjct: 343 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 402
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
K +V AE + AD S+ VP
Sbjct: 403 CKSNQVRKAE-------ELVADFRSRGFVP 425
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVT-YTSVMHWLSNAG 115
RSRGF + TY ++ A R +++Y+ +L E G +V Y ++ L G
Sbjct: 419 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 478
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D AV +EEM + P ++ + L + ++A ++ +EMI+ G P T
Sbjct: 479 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 538
Query: 176 VLMEYLVRAGKYEEALEIFSKMQ 198
++ RAG ++A E+ S+++
Sbjct: 539 AVVSAYCRAGMIQKADELASELR 561
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 159/402 (39%), Gaps = 37/402 (9%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M KG D TY+ V+ L NA VD A ++EEMK P + +YT +
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+++A + EM++ G PN TYT L+ ++A K A E+F M G P+
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
LI+ CK+G+ I M+ N + FK+ D N
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGN------ADIPDVDMYFKIDDGN-------------- 630
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
I D + + LV L K + LL + + + + V +
Sbjct: 631 -IRDPNIFTY------------GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ C + D A + F + Y +LI L K +++ M +
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKAL 448
+ V + +I L + A ++ S++ E++ C TYTA+I + AG DK L
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMM-EEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
++ + M KG P+ T+ VL+ G + DA E K
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 161/398 (40%), Gaps = 17/398 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ R TY ++ +F EA R+ + V M + G N+D T +H L AG A
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + E+ + K T++ YT + L +EA D M PN TY +L+
Sbjct: 287 LALIEKEEFK--LDTVI-YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+R + I S M G P + N LI C++G+ +L+ M +
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403
Query: 241 YPVFKEALQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y V+ + ++ SL + ++ + E + + + V L
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNV---------SNLARC 454
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L S++ +M K D++ S +I + C+ + D A L FE + +
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI K+ + + +EM + G + V LIH AR+ A ++F
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574
Query: 420 LLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTM 454
++ + C TYTALI + +G +KA +IY M
Sbjct: 575 MMLS-EGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 204/538 (37%), Gaps = 85/538 (15%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLF---FNWVSRSRGFN- 63
V+ + K W A L++ K D+ Q++ + +A LF +++SR R +
Sbjct: 274 VHLLCKAGRWREALALIEKEEFKLDTVIYTQMISG---LCEASLFEEAMDFLSRMRSSSC 330
Query: 64 -HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ TY +L +++ K + +M +G + S++H +GD A
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKE------ATDVYKEMIQRGLPPNCYTYTV 176
+ ++M C P V Y + + N+++ A Y EM+ + N +
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L L AGK+E+A I +M G PD + + +I C A + L+ MK N
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 237 LALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + + +F KV LL Q F E + D A VT
Sbjct: 511 VVPDVFTYTILIDSFCKVG-----LLQQARKWFD-EMVRDGCAPNVVTY---------TA 555
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC------------------- 336
L+ LK + + + + L ++ + + + +I+ +C
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615
Query: 337 ------------DHRRRD------GAL---LAFEYSVKMDLNL-----------ERTAYL 364
D RD GAL L + VK +L Y
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
ALI K+ + + +M++ G+ VY + LI RL +R A K+ S + E+
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735
Query: 425 QKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
C YT +I G D+A ++ M KG HP++ T+ ++ G K G+V
Sbjct: 736 S-CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y ++D F + ++ + VF M E+G + TY+S++ L +D A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + M C P ++ YT + L + EA + M ++G PN TYT +++
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AGK ++ LE+ +M G P+ +LI CC AG +L MK+
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 241 YPVFKEALQTF 251
+++ ++ F
Sbjct: 846 MAGYRKVIEGF 856
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY ++D +A ++ + + ++M +G + + Y +++ G +D A ++ +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + P + +Y++ + LF + R+ A V M++ PN YT +++ L + GK
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+EA + S M+E G P+ +I+ KAG+ + ++R M A + ++
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816
Query: 247 ALQTFKVA---DENDSLLWQVHPQFSPEFIS 274
+ A D+ LL ++ + P+ ++
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A + F +S RG+ + +TY++++D + KR+ V M E + + YT
Sbjct: 687 LDEAQMVFTKMSE-RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G D A + M+ K C+P +V+YTA + +V + ++ ++M +
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
G PN TY VL+ + AG ++A ++ +M++
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 33/165 (20%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT M+D + + + +M+EKG + + VTYT+++ AG VD + + +M
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP-------------------- 168
K C P V+Y + + +A + EM Q P
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIIS 863
Query: 169 -------------PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
P Y +L++ +AG+ E ALE+ M
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSC 908
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 186/434 (42%), Gaps = 36/434 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFG---EAKRISSMKYVFEL---MQEKGINIDAVTYTSVMHWL 111
+S G TY+ ++ F ++ + +M+ EL M+E GI+ Y S+MH
Sbjct: 359 KSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGY 418
Query: 112 SNAGDVDGAVNIWEEMKLKEC--YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
+ + + + ++E +LKEC P+I+SY + + +V +A + KEM G+
Sbjct: 419 TIIQNENKCLVVFE--RLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKH 476
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
N TY++L+ + + A IF +M +G+QPD+A N+LIE CK G I IL
Sbjct: 477 NNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICIL 536
Query: 230 RYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
M++ R+ F+ ++ + VA + S L + + + + V V T
Sbjct: 537 EKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTL------DLMRRSGCVPTVMT----- 585
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
L+ L++K + S+L + I + + I+ + AFE
Sbjct: 586 ---YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMR---GYAASGDIGKAFE 639
Query: 350 YSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
Y K+ L L+ Y L+ K + EM+ ++ +LI G
Sbjct: 640 YFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILID--G 697
Query: 407 SARRP--VPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
ARR A + + ED TYT+ I AG +A K+ + M G+ P+
Sbjct: 698 WARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPN 757
Query: 463 LGTFNVLLAGLEKL 476
+ T+ L+ G ++
Sbjct: 758 VKTYTTLIKGWARV 771
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +N + H A+ F + RS G DR Y +++ F + + + E M
Sbjct: 482 SMLINGFIHLHD-FANAFAIFEEMLRS-GLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 539
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
Q++ + + ++ + AGD+ A++ + M+ C PT+++Y A + L +V
Sbjct: 540 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 599
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+ A V +M G+ PN +TYT++M +G +A E F+K++E+G++ D L
Sbjct: 600 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 659
Query: 213 IEKCCKAGETRTIILILRYM 232
+ CCK+G ++ + + R M
Sbjct: 660 LRACCKSGRMQSALAVTREM 679
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ +F + S G D + Y T+L ++ R+ S V M + I + Y +
Sbjct: 636 KAFEYFTKIKES-GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 694
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + GDV A ++ ++MK P I +YT+Y+ ++ A V +EM+ GL
Sbjct: 695 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 754
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGET 222
PN TYT L++ R + AL+ F +M+ AG++PD+A+ + L+ G T
Sbjct: 755 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGST 814
Query: 223 RT-IILILRYMKENRLAL 239
T II + R M EN L +
Sbjct: 815 YTGIISVCREMSENDLTV 832
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 186/437 (42%), Gaps = 52/437 (11%)
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK- 144
+ FE M+ +GI +A +TS++H + A D+ GA++ EEMK + TIV+Y+ +
Sbjct: 317 RATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISG 376
Query: 145 ILFLND-----RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+ND ++ A ++ +EM + G+ Y +M + L +F +++E
Sbjct: 377 FAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKE 436
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
G +P +I C L+ Y+K ++A + KE +++ + N +
Sbjct: 437 CGFKPS------IISYGC---------LLNLYVKIGKVAKALSISKE-MESCGIKHNNKT 480
Query: 260 LLWQVHPQFSPEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
++ ++ A+ E + + ++ +I L+ K N+ +L +
Sbjct: 481 YSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQ 540
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD-LNLERTA--------YLALIG 368
+ +Q + IIE G +A + +D L+L R + Y ALI
Sbjct: 541 KERMQPSNRAFRPIIE---------GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIH 591
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
L++ + + ++++M+ AG + + +++ ++ A + F+ + E +
Sbjct: 592 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKL 651
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
Y L+ +G AL + + M + I + +N+L+ G + G V +AE
Sbjct: 652 DVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLM 711
Query: 487 KEKKSIQADALSKDAVP 503
K+ K +D VP
Sbjct: 712 KQMK--------EDGVP 720
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 123/323 (38%), Gaps = 24/323 (7%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ + +++ Y + G A F M+ G++P+ L+ A + R +
Sbjct: 295 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 354
Query: 229 LRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
+ MK L L + + F K+ D + S + + E D + I+
Sbjct: 355 VEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDG-----IDAPID 409
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
S+ G +I + K LV + L SI +++ +++ A
Sbjct: 410 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIG-------KVAKA 462
Query: 348 FEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH- 403
S +M+ + Y LI I L+ F I EEM ++G + LLI
Sbjct: 463 LSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEA 522
Query: 404 --RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
++G+ R A I + ++ Q + +I Y AG AL M R G
Sbjct: 523 FCKMGNMDR---AICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGC 579
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA 482
P++ T+N L+ GL + +V A
Sbjct: 580 VPTVMTYNALIHGLVRKHKVQRA 602
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 126/349 (36%), Gaps = 29/349 (8%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A ++ M RG+ PN + +T L+ A AL +M+ G++ +ILI
Sbjct: 316 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILIS 375
Query: 215 KCCK------AGETRTIILILRYMKENRLALRYPVFKEALQTFKV-ADENDSLLWQVHPQ 267
K +G ++R M+E+ + V+ + + + +EN L+
Sbjct: 376 GFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLV------ 429
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK-SIQLDSA 326
E + P I G +L L K VA +S M+ I+ ++
Sbjct: 430 ----------VFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNK 479
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
S +I A FE ++ L +R Y LI K+ + I+E+M
Sbjct: 480 TYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 539
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGS 443
K +I A A L+ C T Y ALI
Sbjct: 540 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLM-RRSGCVPTVMTYNALIHGLVRKHK 598
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
+A+ + M GI P+ T+ +++ G G + A E + K K+S
Sbjct: 599 VQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 647
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 194/476 (40%), Gaps = 41/476 (8%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N +++ P E+A +FN + RG T+ +L + ++ VF + K
Sbjct: 102 INAHVRSQLP-EQALFYFNQMI-GRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN--ETK 157
Query: 96 G-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G + +D ++ ++ G +D + +M+ P +V YT + N ++
Sbjct: 158 GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIER 217
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
++ +M + + N YTYTVL+ + G ++ +E++ KM+ G+ P+ N +I
Sbjct: 218 GKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMIC 277
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEAL----QTFKVADENDSLLWQVHPQFSP 270
+CC G+ + M+E +A + + Q +V + + SP
Sbjct: 278 RCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSP 337
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
IS N T I+G SI NL SL + + A +
Sbjct: 338 NLISYN-------TLIDGYCSIG-----------NLDKASSLFNQMKSSGQSPSLATYNI 379
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I + + G L+ + Y L+ L++ + K +I M KAG
Sbjct: 380 LIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAG 439
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKAL 448
+Y+ +LIH L A+K+F L E + Y +I Y GS+ +AL
Sbjct: 440 LVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRAL 499
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPM 504
++ K M G+ P++ ++N S +I K++K +A+ L KD + +
Sbjct: 500 RLLKEMGENGMVPNVASYN------------STIQILCKDEKWTEAEVLLKDMIEL 543
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + + TYT ++D + I ++ M++ G+ D Y ++H L GD+
Sbjct: 402 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 461
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + P V Y + A + KEM + G+ PN +Y +
Sbjct: 462 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 521
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+ L + K+ EA + M E G++P + N++
Sbjct: 522 QILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 6/206 (2%)
Query: 21 QDLLKNLPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
Q LLKN IK D YT N + L M+KA V + + D TY +++D +
Sbjct: 179 QMLLKN--IKPDIYTFNILVDGLCKEGEMKKARNVL-AVMIKQSVDPDVITYNSLMDGYF 235
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
K+ + +VF M +G+ D +Y+ +++ L VD AVN+ +EM K P V
Sbjct: 236 LVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTV 295
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y++ + L + R+ +A D+ EM RG P + TY L++ L + + ++A+ + +K+
Sbjct: 296 TYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKI 355
Query: 198 QEAGVQPDKAACNILIEKCCKAGETR 223
++ G+QPD IL++ CK G +
Sbjct: 356 KDQGIQPDIYTYTILVDGLCKNGRLK 381
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 176/426 (41%), Gaps = 44/426 (10%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ------EKGINIDAVTYTSVMHWLSN 113
RG D +++ F ++ V E + KG ++ V+Y +++ L
Sbjct: 37 RGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCK 96
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
AG+ A+ + + P +V Y+ + L + V +A D+Y +M+ + + P+ T
Sbjct: 97 AGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVIT 156
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
Y LM + G+ +EA+ +F++M ++PD NIL++ CK GE + +L M
Sbjct: 157 YNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMI 216
Query: 234 ENRLALRYPVFKEALQT-FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ + + + F V EN + F+ + A VT D+ +
Sbjct: 217 KQSVDPDVITYNSLMDGYFLVKQENKA-----------TFVFNTMARRGVTPDVHSYSVM 265
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL-AFEYS 351
GL K K + +LL + KS+ ++ S++I D + G + A++
Sbjct: 266 INGLC----KTKMVDEAVNLLKEMHSKSMAPNTVTYSSLI----DGLHKSGRIFDAWDLV 317
Query: 352 VKMDLNLERTA----YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+M N + A Y +L+ L K + K ++ ++ G +Y +L+ L
Sbjct: 318 NEMH-NRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCK 376
Query: 408 ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
R A +++ +L LI Y DKAL + M G P+ TF
Sbjct: 377 NGRLKDAQEVYQIL------------LIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFE 424
Query: 468 VLLAGL 473
+L+ L
Sbjct: 425 ILIRAL 430
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/421 (19%), Positives = 172/421 (40%), Gaps = 44/421 (10%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
K L F+ ++GF ++ +Y T++D +A + V + + + V Y+++
Sbjct: 66 KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
++ L V A +++ +M LK P +++Y M + R+KEA ++ +M+ + +
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ YT+ +L++ L + G+ ++A + + M + V PD N L++ +
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245
Query: 228 ILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVT 283
+ M + Y V L K+ DE +LL ++H + +P ++ +
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVT-------YS 298
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ I+G L K + L++ + ++ D +++++ C + + D
Sbjct: 299 SLIDG-----------LHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDK 347
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+ + + Y L+ L K E+ + + G+ L
Sbjct: 348 AITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFD----- 402
Query: 404 RLGSARRPVPAAKIFSLLP--EDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKG 458
K SLL ED CT T+ LI F DKA+++ + M +G
Sbjct: 403 ------------KALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARG 450
Query: 459 I 459
+
Sbjct: 451 L 451
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 158/370 (42%), Gaps = 49/370 (13%)
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+V+ ++ + LND+VKE + ++I +G N +Y L++ L +AG+ A+++
Sbjct: 49 LVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLR 108
Query: 196 KMQEAGVQPDKAACNILIEKCCK------AGETRTIILILRYMKE----NRL---ALRYP 242
+ VQP+ + +I CK A + + +L+ R + N L L
Sbjct: 109 NIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVG 168
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
KEA+ F N LL + P+ + N V+ + EG + K
Sbjct: 169 RLKEAVGLF-----NQMLLKNI----KPDIYTFNILVDGLCK--EGEMK----------K 207
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+N++A+ ++ +S+ D +++++ ++ + A F + + + +
Sbjct: 208 ARNVLAV------MIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHS 261
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL- 421
Y +I L K + +++EM + + LI L + R A + + +
Sbjct: 262 YSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMH 321
Query: 422 ----PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
P D TY +L+ DKA+ + + +GI P + T+ +L+ GL K G
Sbjct: 322 NRGQPAD---VITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNG 378
Query: 478 RVSDA-EIYR 486
R+ DA E+Y+
Sbjct: 379 RLKDAQEVYQ 388
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
TY +L+ YF +KA ++ TM R+G+ P + +++V++ GL K V +A KE
Sbjct: 226 TYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEM 285
Query: 490 KS 491
S
Sbjct: 286 HS 287
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 173/428 (40%), Gaps = 67/428 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y ++ F + +I + V M+ +G D VTY ++ L N + A+ +
Sbjct: 146 DVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVL 205
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+++ L C PT+++YT ++ + + EA + +EM+ RGL P+ YTY ++ + +
Sbjct: 206 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 265
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA-----GETRTIILILRYMKENRLAL 239
G E A E+ + + G +PD + NIL+ GE + R + N++
Sbjct: 266 GMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT- 324
Query: 240 RYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
Y + +L F DE S+L + + +P+ S + L+
Sbjct: 325 -YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP------------------LIS 365
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQ----LDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L K+ L L GIMD I D +TI+ C + + AL F M
Sbjct: 366 ALCKEGRL----DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGM 421
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
++Y +I L + +V M G
Sbjct: 422 GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG------------------------ 457
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ P++ TY +LI G ++A+ + M + G P++ ++N++L GL
Sbjct: 458 -----IDPDE----ITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 508
Query: 475 KLGRVSDA 482
K+ R+ DA
Sbjct: 509 KVRRIDDA 516
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG ++ TY+ ++ RI V ++M EK + D +Y ++ L G +D
Sbjct: 315 SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLD 374
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I + M C P IV+Y + L N +A +++ ++ G PPN +Y ++
Sbjct: 375 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 434
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L G AL + M G+ PD+ N LI C+ G I +L M+++
Sbjct: 435 SALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 491
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 141/367 (38%), Gaps = 58/367 (15%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKR-----------------------------------I 82
++RGF D TY M+ ++ I
Sbjct: 174 KARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGI 233
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+ + E M +G+ D TY +++ + G V+ A + + K C P ++SY
Sbjct: 234 NEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNIL 293
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
++ + E + EM RG PN TY++L+ L R G+ +EA+ + M E +
Sbjct: 294 LRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 353
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDS 259
PD + + LI CK G I I+ YM N + Y AL A++
Sbjct: 354 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 413
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK---KNLVAIDSLLS-- 314
+ ++ P +S + + G S G+V ++ K + + +SL+S
Sbjct: 414 IFNKLRGMGCPPNVSSYNTMISALWSC-GDRSRALGMVPAMISKGIDPDEITYNSLISCL 472
Query: 315 ---GIMDKSIQL-----DSAVISTIIEVN------CDHRRRDGALLAFEYSVKMDLNLER 360
G+++++I L S T+I N C RR D A+ F ++
Sbjct: 473 CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNE 532
Query: 361 TAYLALI 367
T Y+ LI
Sbjct: 533 TTYILLI 539
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D Y T+L + + +F ++ G + +Y +++ L + GD
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + M K P ++Y + + L + V+EA + +M Q G P +Y +++
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + + ++A+ +F++M E G +P++ +LIE AG RT + L +R
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG-WRTEAMELANSLFSRDV 563
Query: 239 LRYPVFKEALQTFKVAD 255
+ FK +TF + D
Sbjct: 564 ISQDSFKRLNKTFPMLD 580
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-- 419
AY A+I K+N +++ M G + ++I L + R+ A +
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
LL TYT LI G ++A+K+ + M +G+ P + T+N ++ G+ K G V
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268
Query: 480 SDAE--IYRKEKKSIQADALS 498
A I K + D +S
Sbjct: 269 ERAAELITSLTSKGCEPDVIS 289
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 159/402 (39%), Gaps = 37/402 (9%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M KG D TY+ V+ L NA VD A ++EEMK P + +YT +
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+++A + EM++ G PN TYT L+ ++A K A E+F M G P+
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
LI+ CK+G+ I M+ N + FK+ D N
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGN------ADIPDVDMYFKIDDGN-------------- 630
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
I D + + LV L K + LL + + + + V +
Sbjct: 631 -IRDPNIFTY------------GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDAL 677
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ C + D A + F + Y +LI L K +++ M +
Sbjct: 678 IDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSC 737
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKAL 448
+ V + +I L + A ++ S++ E++ C TYTA+I + AG DK L
Sbjct: 738 APNVIIYTEMIDGLCKVGKTDEAYRLMSMM-EEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
++ + M KG P+ T+ VL+ G + DA E K
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 161/398 (40%), Gaps = 17/398 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ R TY ++ +F EA R+ + V M + G N+D T +H L AG A
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + E+ + K T++ YT + L +EA D M PN TY +L+
Sbjct: 287 LALIEKEEFK--LDTVI-YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCG 343
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+R + I S M G P + N LI C++G+ +L+ M +
Sbjct: 344 CLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403
Query: 241 YPVFKEALQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y V+ + ++ SL + ++ + E + + + V L
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNV---------SNLARC 454
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L S++ +M K D++ S +I + C+ + D A L FE + +
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI K+ + + +EM + G + V LIH AR+ A ++F
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574
Query: 420 LLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTM 454
++ + C TYTALI + +G +KA +IY M
Sbjct: 575 MMLS-EGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 204/538 (37%), Gaps = 85/538 (15%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLF---FNWVSRSRGFNH 64
V+ + K W A L++ K D+ Q++ + +A LF +++SR R +
Sbjct: 274 VHLLCKAGRWREALALIEKEEFKLDTVIYTQMISG---LCEASLFEEAMDFLSRMRSSSC 330
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ TY +L +++ K + +M +G + S++H +GD A
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKE------ATDVYKEMIQRGLPPNCYTYTV 176
+ ++M C P V Y + + N+++ A Y EM+ + N +
Sbjct: 391 LLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSN 450
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L L AGK+E+A I +M G PD + + +I C A + L+ MK N
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510
Query: 237 LALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + + +F KV LL Q F E + D A VT
Sbjct: 511 VVPDVFTYTILIDSFCKVG-----LLQQARKWFD-EMVRDGCAPNVVTY---------TA 555
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC------------------- 336
L+ LK + + + + L ++ + + + +I+ +C
Sbjct: 556 LIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNA 615
Query: 337 ------------DHRRRD------GAL---LAFEYSVKMDLNL-----------ERTAYL 364
D RD GAL L + VK +L Y
Sbjct: 616 DIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYD 675
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
ALI K+ + + +M++ G+ VY + LI RL +R A K+ S + E+
Sbjct: 676 ALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN 735
Query: 425 QKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
C YT +I G D+A ++ M KG HP++ T+ ++ G K G+V
Sbjct: 736 S-CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y ++D F + ++ + VF M E+G + TY+S++ L +D A
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + M C P ++ YT + L + EA + M ++G PN TYT +++
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AGK ++ LE+ +M G P+ +LI CC AG +L MK+
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 241 YPVFKEALQTF 251
+++ ++ F
Sbjct: 846 MAGYRKVIEGF 856
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY ++D +A ++ + + ++M +G + + Y +++ G +D A ++ +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + P + +Y++ + LF + R+ A V M++ PN YT +++ L + GK
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+EA + S M+E G P+ +I+ KAG+ + ++R M A + ++
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816
Query: 247 ALQTFKVA---DENDSLLWQVHPQFSPEFIS 274
+ A D+ LL ++ + P+ ++
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A + F +S RG+ + +TY++++D + KR+ V M E + + YT
Sbjct: 687 LDEAQMVFTKMSE-RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G D A + M+ K C+P +V+YTA + +V + ++ ++M +
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
G PN TY VL+ + AG ++A ++ +M++
Sbjct: 806 GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 194/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + S+L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMTEARSILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I C+ D A + +++ + E Y LI K + +
Sbjct: 287 APTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ AAK +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K +DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAK 458
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 143/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI C +G +L+ M
Sbjct: 263 PGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F A + D + + + I + + P+
Sbjct: 318 -IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPM- 375
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ L ++L+ ++ +Q D ++T+I + D A +
Sbjct: 376 -----IEYLCNNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 430 LRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDH 469
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 194/466 (41%), Gaps = 44/466 (9%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A FF ++ S F H T+ M+ ++ S++Y+ + M+ +G + + SV+
Sbjct: 58 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 117
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
G + AV ++ +K C P++ Y + L +R++ VY++M + G
Sbjct: 118 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 177
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN +TY VL++ L + K + A ++ +M G P+ + +I C+ G
Sbjct: 178 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVG-------- 229
Query: 229 LRYMKENR-LALRY-PVFK--EALQTFKVADEN-----DSLLWQVHPQFSPEFISDNDAV 279
+KE R LA R+ PV AL + + + + V SP IS + +
Sbjct: 230 --MVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLI 287
Query: 280 EFVTTDIEGPLSIDQGLVLILLKK---KNLVAIDSLLSGIMDKSIQLDS----------- 325
++ G + + L+ +LK+ N+ + SL+ G + D+
Sbjct: 288 NELSNS--GQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGF 345
Query: 326 ------AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+T+++ C H D A+ F + ++ + Y +LI K +
Sbjct: 346 GLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGA 405
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGV 437
I +M +G V + ++ L + A + ++ ++ T+ A I
Sbjct: 406 VYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 465
Query: 438 YFSAGSADKALKIYKTMCRK-GIHPSLGTFNVLLAGLEKLGRVSDA 482
AG D A K+++ M ++ P++ T+N LL GL K R+ +A
Sbjct: 466 LCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEA 511
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
YT+M++ + + + E+M ++ T+ + + L +AG +D A ++ +M
Sbjct: 423 VYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482
Query: 128 KLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ + C P IV+Y + L +R++EA + +E+ RG+ + TY L+ AG
Sbjct: 483 EQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGL 542
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
AL++ KM G PD+ N++I CK G+ + +L + R R
Sbjct: 543 PGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWR 596
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 6/206 (2%)
Query: 21 QDLLKNLPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
Q LLKN IK D YT N + L M+KA V +G + + TY +++D +
Sbjct: 264 QMLLKN--IKPDVYTFNILVDGLCKEGEMKKARNVL-AVMIKQGVDSNIVTYNSLMDGYF 320
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
K+ + +VF M +G+ D +Y+ +++ L VD AVN+++EM K P V
Sbjct: 321 LVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTV 380
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + + L R+ +A D+ EM RG P + TY+ L++ L + + ++A+ + +K+
Sbjct: 381 TYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKI 440
Query: 198 QEAGVQPDKAACNILIEKCCKAGETR 223
++ G+QP+ IL++ CK G +
Sbjct: 441 KDQGIQPNIYTYTILVDGLCKNGRLK 466
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 192/483 (39%), Gaps = 55/483 (11%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S++ K+ + T S ++ I+ D +T N ++ + F+ +++ GF
Sbjct: 71 LSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGF 130
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ D T TT++ ++ + + + KG ++D V+Y ++++ L G+ A+
Sbjct: 131 HPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQ 190
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ ++ P +V Y + L + V A+D+ EMI + + P+ TYT L+ +
Sbjct: 191 VLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCL 250
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
G+ +EA+ +F++M ++PD NIL++ CK GE + +L M + +
Sbjct: 251 IVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIV 310
Query: 243 VFKEALQT-FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ + F V EN + F+ + A VT D++
Sbjct: 311 TYNSLMDGYFLVKQENKA-----------TFVFNTMARRGVTPDVQS------------- 346
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
S +I C + D A+ F+ +
Sbjct: 347 --------------------------YSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTV 380
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y +LI L+K ++V EM G V + L+ L + A + + +
Sbjct: 381 TYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKI 440
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ Q TYT L+ G A +Y+ + KG H + +NV++ GL K G
Sbjct: 441 KDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLF 500
Query: 480 SDA 482
+A
Sbjct: 501 DEA 503
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +N + KT E LF S+S N TY +++D + RIS + M
Sbjct: 348 SIMINGLCKTKMVDEAVNLFKEMHSKSMAPN--TVTYNSLIDGLLKYGRISDAWDLVNEM 405
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+G D +TY+S++ L VD A+ + ++K + P I +YT + L N R+
Sbjct: 406 HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRL 465
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
K+A VY++++ +G + Y V++ L + G ++EAL + SKM++ G PD L
Sbjct: 466 KDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETL 525
Query: 213 IEKCCKAGETRTIILILRYM 232
+ + + + +LR M
Sbjct: 526 VRALFENDKNDKAVKLLREM 545
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
TY +L+ YF +KA ++ TM R+G+ P + ++++++ GL K V +A KE
Sbjct: 310 VTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKE 369
Query: 489 KKS 491
S
Sbjct: 370 MHS 372
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 204/466 (43%), Gaps = 36/466 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + ++++Y +++ F +A +F M G + + T+ +++ +G
Sbjct: 373 KEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQS 432
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ +E MK K P + + A + L + R+ A V+ E+ G+ P+ TYT++
Sbjct: 433 LKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMM 492
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +A K +EA+ FS M E+G PD A N LI+ K G+ + +KE ++
Sbjct: 493 IKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKI 552
Query: 238 ALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ L KV + L + P I+ N ++ ++ + E +ID
Sbjct: 553 EPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAID 612
Query: 294 QGLVLILLKKK----NLVAIDSLLSGI---------------MDKSIQLDSAVISTIIEV 334
+L + +K +L + ++++ G+ M K + D A + TI+
Sbjct: 613 ---MLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPS 669
Query: 335 NCDHRRRDGALLAF-EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
+ AL EY +K N++++++ +L+ ++K K E E + G L
Sbjct: 670 FVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILL 729
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSL---LPEDQKCTATYTALIGVYFSAGSADKALKI 450
+ LI L ++ + A ++F+ L K T +Y +LI D A +
Sbjct: 730 NDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLK-TGSYNSLIRGLVDENLIDIAEDL 788
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD-----AEIYRKEKKS 491
+ M R G P T+N++L + K RV + E++RK +S
Sbjct: 789 FTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYES 834
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 114/534 (21%), Positives = 205/534 (38%), Gaps = 132/534 (24%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ- 93
+V +L++ P +A F +R H + ML++ R+ M VF+LMQ
Sbjct: 70 SVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQK 129
Query: 94 ----------------------------------EKGINIDAVTYTSVMHWLSNAGDVDG 119
E G++++A TY ++++L +G
Sbjct: 130 QVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAE 189
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++ M P++ +Y+ M V + EM RG+ PN Y+YT+ +
Sbjct: 190 AMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIR 249
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +A +++EA I KM+++G +PD ++I+ C AG RL+
Sbjct: 250 VLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAG---------------RLSD 294
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT-TDIEGPLSIDQGLVL 298
VF + K +D+ D V ++T D G Q +V
Sbjct: 295 AKAVFWK----MKASDQKP------------------DRVTYITLLDKCGDSGDSQSVVE 332
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ +++++ + +I +AV+ + +V R D AL F+ + ++
Sbjct: 333 VW---------NAMVADGYNDNIVSYTAVVDALCQVG----RVDEALAVFDEMKEKGMSP 379
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH--------------- 403
E+ +Y +LI +K + F + E+ M G S Y L I+
Sbjct: 380 EQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRY 439
Query: 404 --------------------------RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGV 437
RLG A+R K + P+ T TYT +I
Sbjct: 440 EHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPD----TITYTMMIKC 495
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKK 490
A AD+A+ + M G P + N L+ L K G+ ++A +++ K K+
Sbjct: 496 CSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKE 549
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FTY +LD G++ R+ M V + M KG VTY +++ L + ++ A
Sbjct: 796 GCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQA 855
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ + + PT +Y + L + ++ +A +++ EM++ G PNC Y +L+
Sbjct: 856 IDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNG 915
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
AG E ++F KM E G+ PD + ILI+ C AG + R + E
Sbjct: 916 HRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHE 969
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 194/485 (40%), Gaps = 90/485 (18%)
Query: 33 SYTVN-QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
SYT+ +VL ++A+ + S G D T+T ++ + +A R+S K VF
Sbjct: 243 SYTICIRVLGQAARFDEAYHILGKMEDS-GCKPDVVTHTVIIQVLCDAGRLSDAKAVFWK 301
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ D VTY +++ ++GD V +W M IVSYTA + L R
Sbjct: 302 MKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGR 361
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V EA V+ EM ++G+ P Y+Y L+ ++A ++ ALE+F+ M G P+ +
Sbjct: 362 VDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVL 421
Query: 212 LIEKCCKAGETRTIILILRYMK--------------------ENRLALRYPVFKEALQTF 251
I K+G++ I +MK RL + VF E L+
Sbjct: 422 FINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYE-LKAM 480
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
V+ D++ + + + + ++A+ F + +E G V +L +L ID+
Sbjct: 481 GVSP--DTITYTMMIKCCSKASKADEAMNFFSDMVE------SGCVPDVLALNSL--IDT 530
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
L G + + A F +M + Y L+ L
Sbjct: 531 LYKG-----------------------GKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLG 567
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATY 431
+ +V +++EEMT+ +Y L+ TY
Sbjct: 568 REGKVKEVMQLLEEMTRT-----IYPPNLI----------------------------TY 594
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKK 490
++ G + A+ + +M KG P L ++N ++ GL K R+ +A ++ + KK
Sbjct: 595 NTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKK 654
Query: 491 SIQAD 495
+ D
Sbjct: 655 ILAPD 659
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 199/469 (42%), Gaps = 46/469 (9%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+AW F+ + + TY T+L G ++ + + E M + +TY +V
Sbjct: 539 EAWQLFHKLKEMK-IEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTV 597
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ LS G+V+ A+++ M K C P + SY M L +R++EA ++ +M ++ L
Sbjct: 598 LDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKIL 656
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSK-MQEAGVQPDKAACNILIEKCCK-AG----- 220
P+ T ++ V+ G +EAL + + +AG DK++ + L+E K AG
Sbjct: 657 APDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSI 716
Query: 221 ------ETRTIIL-------ILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHP 266
+R I+L ++R++ +++ AL EA Q F K SL +
Sbjct: 717 EFAENIASRGILLNDFFLCPLIRHLCKHKKAL------EAHQLFNKFKGLGVSLKTGSYN 770
Query: 267 QFSPEFISDN--DAVEFVTTDIE----GPLSIDQGLVLILLKKKNLVAIDSLLS---GIM 317
+ +N D E + T+++ GP L+L + K + ++ +L +
Sbjct: 771 SLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKS--MRVEEMLKVQKEMH 828
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
K + +TII +R + A+ + + + Y L+ L+K
Sbjct: 829 RKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMV 888
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLI--HRLGSARRPVPAAKIFSLLPED--QKCTATYTA 433
+ EM + G + +L+ HR+ V ++F + E +YT
Sbjct: 889 DAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENV--CQLFEKMVEQGINPDIKSYTI 946
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
LI +AG + L ++ + G+ P L +N+L+ GL K R+ +A
Sbjct: 947 LIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEA 995
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 18 DSAQDL---LKNLPIKWDSYTVNQVLKTHPPMEKA--WLFFNWVSRSRGFNHDRFTYTTM 72
D A+DL +K L D +T N +L + L +G+ TY T+
Sbjct: 783 DIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTI 842
Query: 73 LDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+ ++KR+ ++ + LM E G + TY ++ L +G + A N++ EM
Sbjct: 843 ISGLVKSKRLEQAIDLYYNLMSE-GFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYG 901
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C P Y + + + ++++M+++G+ P+ +YT+L++ L AG+ + L
Sbjct: 902 CEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGL 961
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
F ++ E G++PD N+LI+ K+ + + MK+
Sbjct: 962 CYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKK 1004
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
L++N +S GF+ TY +LD ++ ++ + +F M E G + Y +++
Sbjct: 858 LYYNLMSE--GFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNG 915
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
AG+ + ++E+M + P I SYT + L R+ + ++++ + GL P+
Sbjct: 916 HRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPD 975
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
Y +L++ L ++ + EEA+ +F++M++ G+ P+ N LI
Sbjct: 976 LIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLI 1018
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N D +YT ++D A R++ F + E G+ D + Y ++ L + ++
Sbjct: 935 QGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEE 994
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV+++ EMK K P + +Y + + L + EA +Y+E++++G P+ +TY L+
Sbjct: 995 AVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIR 1054
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+G + A + +M G QP+ +
Sbjct: 1055 GYSVSGSTDNAYAAYGQMIVGGCQPNSS 1082
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 166/423 (39%), Gaps = 52/423 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EK+ F ++ SRG + F ++ + K+ +F + G+++ +Y
Sbjct: 712 VEKSIEFAENIA-SRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYN 770
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L + +D A +++ EMK C P +Y + + + RV+E V KEM ++
Sbjct: 771 SLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRK 830
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G TY ++ LV++ + E+A++++ + G P C G
Sbjct: 831 GYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP----------CTYG----- 875
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
P+ L++ K+ D ++N E +
Sbjct: 876 ----------------PLLDGLLKSGKMVD------------------AENLFNEMLEYG 901
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
E +I L+ N + L ++++ I D + +I+ C R + L
Sbjct: 902 CEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGL 961
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F ++ L + Y LI L K + + EM K G +Y LI L
Sbjct: 962 CYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHL 1021
Query: 406 GSARRPVPAAKIFS-LLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
G A + AA+++ LL + K + TY ALI Y +GS D A Y M G P+
Sbjct: 1022 GKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNS 1081
Query: 464 GTF 466
T+
Sbjct: 1082 STY 1084
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D Y ++D G+++RI +F M++KGI + TY S++ L AG A
Sbjct: 971 GLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEA 1030
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
++EE+ K P++ +Y A ++ ++ A Y +MI G PN TY L
Sbjct: 1031 AQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 166/405 (40%), Gaps = 24/405 (5%)
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
++ V E + + G N+D ++ S+M + V+ ++ E + + +
Sbjct: 679 ALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLI 738
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+ L + + EA ++ + G+ +Y L+ LV + A ++F++M+ G
Sbjct: 739 RHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCG 798
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK---EALQTFKVADENDSL 260
PD+ N++++ K+ ++ + + M Y + L K ++ L
Sbjct: 799 PDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDL 858
Query: 261 LWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+ + + FSP T GPL +D LLK +V ++L + +++
Sbjct: 859 YYNLMSEGFSP------------TPCTYGPL-LDG-----LLKSGKMVDAENLFNEMLEY 900
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ + + + ++ + + FE V+ +N + +Y LI L
Sbjct: 901 GCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDG 960
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALIGV 437
++ + G + + LLI LG + R A +F+ + + TY +LI
Sbjct: 961 LCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILH 1020
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
AG A +A ++Y+ + RKG PS+ T+N L+ G G +A
Sbjct: 1021 LGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNA 1065
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y ++ F +A RI S K V + M+ KG + D VT+ ++ G +D A+ ++
Sbjct: 43 DVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVF 102
Query: 125 EE-MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
EE +K C PT+++YT ++ L + EA + EM+ RGL P+ +TY V+ L +
Sbjct: 103 EELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCK 162
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK + A E + G +PD NIL+ G+
Sbjct: 163 EGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGK 200
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 122/287 (42%), Gaps = 12/287 (4%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG D FTY + + ++ + +G D +TY ++ L N G D
Sbjct: 143 SRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWD 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
E+ + C P +V+Y+ + L + +++E+ ++ K M ++GL P+ Y Y L+
Sbjct: 203 EGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLI 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
R GK + A+E M G PD N ++ CK G + I + E
Sbjct: 263 AAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCP 322
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFS----PEFISDNDAVEFVTTDIEGPLSIDQ 294
+ L + + L + S P+ I+ N + + D G +
Sbjct: 323 PNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRD--GMVDEAI 380
Query: 295 GLVLILLKKK---NLVAIDSLLSGIMDKSIQLDSA--VISTIIEVNC 336
GL+ +L + N+V+ ++L G+ K+ ++D A V++ +IE C
Sbjct: 381 GLLADMLSGRFQPNIVSYKTVLLGLC-KAHRIDDAIEVLAAMIENGC 426
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 55 WVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
W+S SRG + TY+ ++ +I + ++M+EKG+ DA Y ++
Sbjct: 207 WMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFC 266
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G +D A+ + M P IV+Y M L N A +++ ++ + G PPN
Sbjct: 267 REGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVS 326
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+Y ++ L +G AL + S+M G+ PD N LI C+ G I +L M
Sbjct: 327 SYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADM 386
Query: 233 KENRLALRYPVFKEAL 248
R +K L
Sbjct: 387 LSGRFQPNIVSYKTVL 402
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT +++ + I + + M +G+ D TY + L G VD A +
Sbjct: 117 TYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTL 176
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P +++Y ++ L + E E+ RG PN TY++L+ L R GK
Sbjct: 177 NSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKI 236
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
EE++ + M+E G+ PD + LI C+ G+ I L M
Sbjct: 237 EESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V + +G D + Y ++ F ++ + M G D V Y ++M L G
Sbjct: 245 VMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNG 304
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ D AV I+ ++ C P + SY + L+ + A + +M+ +G+ P+ TY
Sbjct: 305 NGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYN 364
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ L R G +EA+ + + M QP+ + ++ CKA I +L M EN
Sbjct: 365 SLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIEN 424
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 68 TYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+Y TML ++ R ++ + +++ KGI+ D +TY S++ L G VD A+ + +
Sbjct: 327 SYNTMLSALWSSGDRYRALGMISQMLS-KGIDPDVITYNSLISCLCRDGMVDEAIGLLAD 385
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M P IVSY + L R+ +A +V MI+ G PN TYT+L+E + +G
Sbjct: 386 MLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGS 445
Query: 187 YEEALEIFSKM 197
+A+E+ + +
Sbjct: 446 RTQAMELANSL 456
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 1/195 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D Y T++ + +F + E G + +Y +++ L ++GD A
Sbjct: 285 GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRA 344
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +M K P +++Y + + L + V EA + +M+ PN +Y ++
Sbjct: 345 LGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLG 404
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +A + ++A+E+ + M E G QP++ +LIE +G +RT + L A+
Sbjct: 405 LCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSG-SRTQAMELANSLYIMNAIS 463
Query: 241 YPVFKEALQTFKVAD 255
FK +TF + D
Sbjct: 464 EDSFKRLNKTFPLLD 478
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
AY A+I K N +++ M + G S V ++I + A K+F L
Sbjct: 46 AYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEEL 105
Query: 422 PEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+D C T YT LI Y G D+ALK+ M +G+ P T+NV+ GL K G+
Sbjct: 106 LKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGK 165
Query: 479 VSDA 482
V A
Sbjct: 166 VDRA 169
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 154/388 (39%), Gaps = 41/388 (10%)
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K+ P ++ T +K F + + +AT V + + G P+ + Y ++ +A +
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL-RYMKENRLA---LRYP 242
E A + +M+ G PD NI+I C G+ + + +K+N + Y
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119
Query: 243 VFKEAL-------QTFKVAD-------ENDSLLWQVHPQFSPEFISDNDAVEFVTT-DIE 287
+ EA + K+ D E D+ + V + + + A EFV T +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179
Query: 288 G--PLSIDQGLVL-ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
G P I ++L LL + + +S I + + + S +I C RDG
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLC----RDGK 235
Query: 345 LLAFEYSVKM-------DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+ E SV + L + Y LI + E ++ M G +
Sbjct: 236 I---EESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVN 292
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTM 454
++ L A +IF L E C ++Y ++ +S+G +AL + M
Sbjct: 293 YNTIMAALCKNGNGDHAVEIFGKLDE-VGCPPNVSSYNTMLSALWSSGDRYRALGMISQM 351
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KGI P + T+N L++ L + G V +A
Sbjct: 352 LSKGIDPDVITYNSLISCLCRDGMVDEA 379
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 206/491 (41%), Gaps = 51/491 (10%)
Query: 30 KWDSYTVNQVLKTHPPMEKAWLFFNWVS---------RSRGFNHDRFTYTTMLDIFGEAK 80
+ D Y + + +H + + F + + R RG D +TYT + F +
Sbjct: 101 RMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTA 160
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R + + M E G + +AV Y +V+ L ++G+ D A +++EM + P +V++
Sbjct: 161 RPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFN 220
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE---------EAL 191
+ +L V E+ + ++++RG+ PN +T+ + ++ L R G + EA
Sbjct: 221 KLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAE 280
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE-ALQT 250
E KM G +PD N +I+ CK G + NR+ L+ VFK
Sbjct: 281 EYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQ---------DANRV-LKDAVFKGFKPDE 330
Query: 251 FKVADENDSLLWQVHPQFSPEFISDN------DAVEFVTTDIEGPLSIDQGLVLILLKKK 304
F + P + D ++ T I+G LS QGL+L L+
Sbjct: 331 FTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKG-LS-QQGLILPALQLM 388
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
N +A + L I ++ VI+ + ++ C D + L + ++ + Y
Sbjct: 389 NEMAENGCLPNIWTYNL-----VINGLCKMGC---VSDASHLV-DDAIAKGCPPDIFTYN 439
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
LI K E+V M G + V L++ L A + +IF + E+
Sbjct: 440 TLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM-EE 498
Query: 425 QKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ CT TY ++ A ++A+ + M KG+ P + +F L G K+G +
Sbjct: 499 KGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDG 558
Query: 482 A-EIYRKEKKS 491
A +++R+ +K
Sbjct: 559 AYQLFRRMEKQ 569
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 189/507 (37%), Gaps = 78/507 (15%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
V V+K KA FN GF H TY ++ G M+ + M+E
Sbjct: 10 VAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN 69
Query: 96 GIN-IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
N + Y M G V AV+ +E M C P++ S+ A M IL +
Sbjct: 70 VNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQ 129
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVR------------------------------- 183
A VY M RG+ + YTYT+ ++ +
Sbjct: 130 AHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVA 189
Query: 184 ----AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII--LILRYMKE 234
+G+++ A E+F +M + PD A N L+ CK G E+ ++ ++ R +
Sbjct: 190 GLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCP 249
Query: 235 NRLAL--------RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
N R A++ +V + + L V+ F P+ ++ N ++
Sbjct: 250 NLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCK-- 307
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
+G+V + N V D++ G + D ++I C D A+
Sbjct: 308 -------KGMV----QDANRVLKDAVFKG-----FKPDEFTYCSLINGFCKDGDPDRAMA 351
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL- 405
F+ + L Y LI L + +++ EM + G ++ L+I+ L
Sbjct: 352 VFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLC 411
Query: 406 -----GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
A V A I P D TY LI Y D A ++ M +G+
Sbjct: 412 KMGCVSDASHLVDDA-IAKGCPPD---IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMT 467
Query: 461 PSLGTFNVLLAGLEKLGRVSDA-EIYR 486
P + T+N LL GL K G+ + EI++
Sbjct: 468 PDVITYNTLLNGLCKAGKSEEVMEIFK 494
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 124/305 (40%), Gaps = 48/305 (15%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D FTY T++D + + ++ S + M +G+ D +TY ++++ L AG +
Sbjct: 428 AKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSE 487
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ I++ M+ K C P I++Y + L +V EA D+ EM +GL P+ ++ L
Sbjct: 488 EVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLF 547
Query: 179 EYLVRAGKYEEA------------------------------------LEIFSKMQEAGV 202
+ G + A +++FS M+ +G
Sbjct: 548 TGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGC 607
Query: 203 QPDKAACNILIEKCCKAGE-TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
PD ++I+ CK G T+ +L M E R F L V D+ +
Sbjct: 608 DPDNYTYRVVIDGFCKMGNITQGYKFLLENM-EKRFIPSLTTFGRVLNCLCVKDKVHEAV 666
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGP---LSIDQGLVLILLKKKNLV--AIDSLLSGI 316
+H + E V T E ++ + LV LLKK ++ + L GI
Sbjct: 667 GIIHLMLQKGIVP-----ETVNTIFEADKKVVAAPKILVEDLLKKGHIAYYTYELLYDGI 721
Query: 317 MDKSI 321
DK I
Sbjct: 722 RDKKI 726
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A+ F + + H TY ++ F E ++ +F +M+ G + D TY
Sbjct: 556 IDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYR 615
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
V+ G++ E K P++ ++ + L + D+V EA + M+Q+
Sbjct: 616 VVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQK 675
Query: 166 GLPP 169
G+ P
Sbjct: 676 GIVP 679
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 150/416 (36%), Gaps = 50/416 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TYT +L+ ++ V + M+ KG + VTY +++ + G VD
Sbjct: 181 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 240
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A I + P IVSYT +K L R + ++ EM+ + PN T+ +L+
Sbjct: 241 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 300
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ R G E A+++ +M + G P+ CNI+I CK G L M
Sbjct: 301 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 360
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L+ A W+ + PE + N VT + + I
Sbjct: 361 DTISYTTVLRGLCRAGR-----WEHAKELLPEMVRKNCPPNEVTFNT---------FICI 406
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L +K + L+ + + + + ++ C R D AL F +
Sbjct: 407 LCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPN 463
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y L+ L AE++ EM + L
Sbjct: 464 TITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNA------------------------ 499
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
T+ L+ + G ++A+++ M G P+L TFN LL G+ K
Sbjct: 500 ---------VTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITK 546
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 169/436 (38%), Gaps = 24/436 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF D +YTT+L A+R +K +F M +K + VT+ ++ + G V+
Sbjct: 250 SYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVE 309
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + ++M C P + + RV +A D M G P+ +YT ++
Sbjct: 310 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVL 369
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L RAG++E A E+ +M P++ N I C+ G I ++ M E +
Sbjct: 370 RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCS 429
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ + + F V DS L + + + + + T L+
Sbjct: 430 VGIVTYNALVHGFCVQGRVDSAL-----ELFNNLPCEPNTITYTT------------LLT 472
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L + L A LL+ ++ K L++ + ++ C + A+ ++
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ L+ + K + E++ + G SL + ++ L R A ++
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 592
Query: 419 SLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ + + Y ++ D+A+ + M G P+ T+ +L+ GL
Sbjct: 593 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 652
Query: 477 GRVSDA-----EIYRK 487
G + +A E+Y K
Sbjct: 653 GLLKEARYVLSELYAK 668
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 165/431 (38%), Gaps = 41/431 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R++G + TY +++ R+ K + + G D V+YT+V+ L A
Sbjct: 214 RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRW 273
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D ++ EM K+C P V++ ++ V+ A V ++M Q G PN ++
Sbjct: 274 DDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIV 333
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + + G+ ++A + + M G PD + ++ C+AG +L M
Sbjct: 334 INAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNC 393
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHP--QFSPEFISDNDAVEFVTTD-------IEG 288
P + TF L+ Q + PE+ +V VT + ++G
Sbjct: 394 ----PPNEVTFNTFICILCQKGLIEQAIKLIELMPEY---GCSVGIVTYNALVHGFCVQG 446
Query: 289 PLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
+D L L L + N + +LL+G+ C R D A
Sbjct: 447 --RVDSALELFNNLPCEPNTITYTTLLTGL-------------------CHAERLDAAAE 485
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
++ D L + L+ + + E+V +M + G + + L+ +
Sbjct: 486 LLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGIT 545
Query: 407 SARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
A ++ L T TY++++ V ++A+++ + G+ P +G
Sbjct: 546 KDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVG 605
Query: 465 TFNVLLAGLEK 475
+N +L L K
Sbjct: 606 MYNKILFALCK 616
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE- 483
Q TYT L+ + +A+ + M KG P++ T+NV++ G+ + GRV DA+
Sbjct: 184 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKE 243
Query: 484 -IYRKEKKSIQADALSKDAV 502
+ R Q D +S V
Sbjct: 244 ILNRLSSYGFQPDIVSYTTV 263
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 206/487 (42%), Gaps = 63/487 (12%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ K+ YST S + + + + YT+N ++ + + + F+ +++ H
Sbjct: 72 LTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGH 131
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I ++F+ M ++G + VTY ++++ L G+ A+
Sbjct: 132 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 191
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M+ C P +V YT+ + L + +V EA +++ +M+ +G+ P+ +TYT L+ L
Sbjct: 192 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 251
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+++ + ++M + + PD + +++ CK G+ I+ M + +
Sbjct: 252 NLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV 311
Query: 243 VFKEALQTFKVADENDSLL----WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ + + E D + V F+P+ IS TT I G I +
Sbjct: 312 TYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS-------YTTLINGYCKIHK---- 360
Query: 299 ILLKKKNLVAIDS---LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
ID L + K D+ +T++ C R A+ F V
Sbjct: 361 ----------IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVA-- 408
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
R L+ I L++ K + E M ALL A
Sbjct: 409 ----RGQMPDLVTYSILLDSLCKNRHLEEAM------------ALL-----------KAI 441
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ +L P+ Q Y +I AG + A ++ + KG+HPS+ T+N+++ GL K
Sbjct: 442 EASNLNPDIQ----VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCK 497
Query: 476 LGRVSDA 482
G +++A
Sbjct: 498 RGLLNEA 504
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 39/249 (15%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++ ++ D T ++ H M++A F+ + R +GF D +YTT+++ + +
Sbjct: 299 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR-KGFAPDVISYTTLINGYCK 357
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+I Y+FE M K D TY ++M+ L + G + A+ ++ EM + P +V+
Sbjct: 358 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVT 417
Query: 139 YTAYMKILFLNDRVKEAT-----------------------------------DVYKEMI 163
Y+ + L N ++EA D++ +
Sbjct: 418 YSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 477
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+GL P+ +TY +++ L + G EA ++F +M PD N + + ET
Sbjct: 478 SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 537
Query: 224 TIILILRYM 232
I +L M
Sbjct: 538 RAIQLLEEM 546
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D TY+ +LD + + + + + ++ +N D Y ++ + AG+++
Sbjct: 408 ARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELE 467
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + K +P++ +Y + L + EA ++ EM P+ TY +
Sbjct: 468 AARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIA 527
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
++ + A+++ +M G D +C +++
Sbjct: 528 RGFLQNNETLRAIQLLEEMLARGFSAD--SCFLML 560
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 191/486 (39%), Gaps = 63/486 (12%)
Query: 10 KILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPME-----KAWLFFNWVSRSR--GF 62
K +KY S + + + DS+ VN +L + K F R+ GF
Sbjct: 57 KFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGF 116
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ +L + M++V+ M ++ I ++ +++ V++ L G ++ A +
Sbjct: 117 KLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGD 176
Query: 123 IWEEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ E+MK+ P +++Y Y K+ + ++ +A + KEM+ +G+ PN TY +L+
Sbjct: 177 VIEDMKVWGVSPNVITYNTLIDGYCKMGRIG-KMYKADAILKEMVAKGICPNEVTYNILI 235
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + A+ +F +MQ G++P+ NILI C G+ + +A
Sbjct: 236 DGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKV-----------DEAVA 284
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
LR + V++D+E + L+
Sbjct: 285 LRD--------------------------------------QMVSSDLEPNVVTHNVLIN 306
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
K K + +L + + + + ++ +T+I+ C R + A + + +
Sbjct: 307 GFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP 366
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
E + Y LI L + ++ EM S V +LI L A K+
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLL 426
Query: 419 SLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ E TY L+ Y G+ AL + M RKG ++ T NVL+ G
Sbjct: 427 DEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLK 486
Query: 477 GRVSDA 482
GR+ DA
Sbjct: 487 GRLEDA 492
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
TVN+ + MEK +G + + TYTT++D + + R+ ++ +M +
Sbjct: 313 TVNEAINLFNDMEK-----------QGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMID 361
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+GI + TY ++ L GDV A ++ EM K+ +V+Y + L ++
Sbjct: 362 RGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRK 421
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A + EM ++GL P+ TY LM+ R G AL + ++M+ G Q + N+LI+
Sbjct: 422 AVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIK 481
Query: 215 KCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL 248
C G +L M E L Y + KE +
Sbjct: 482 GFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEM 518
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 59 SRGFNHDRFTYTTMLDIF---GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
S+ + D TY ++D GE+++ + + M EKG+N VTY ++M G
Sbjct: 396 SKKLSADVVTYNILIDSLCKKGESRKAVKL---LDEMFEKGLNPSHVTYNTLMDGYCREG 452
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++ A+ + M+ K +V++ +K L R+++A + EM++RGL PN TY
Sbjct: 453 NLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYE 512
Query: 176 VLMEYLVRAG 185
++ E ++ G
Sbjct: 513 IIKEEMMEKG 522
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A+ +N + RG + TY ++ + + + + M K ++ D VTY
Sbjct: 349 MEDAFALYNMMI-DRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYN 407
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G+ AV + +EM K P+ V+Y M ++ A V M ++
Sbjct: 408 ILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERK 467
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G N T+ VL++ G+ E+A + ++M E G+ P++ I+ E+ + G
Sbjct: 468 GKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 123/330 (37%), Gaps = 31/330 (9%)
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
VR K E F + + G + +CN L+ K E + + R M + ++ L
Sbjct: 95 FVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELN 154
Query: 241 YPVFKEALQTF-KVADEN-------DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
F + KV N D +W V SP I+ N T I+G +
Sbjct: 155 VISFNIVVNGLCKVGKLNRAGDVIEDMKVWGV----SPNVITYN-------TLIDGYCKM 203
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
+ + D++L ++ K I + + +I+ C GA+ F
Sbjct: 204 G--------RIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQ 255
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ L Y LI L + + ++M + V +LI+ +
Sbjct: 256 RQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN 315
Query: 413 PAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A +F+ + + TYT LI Y G + A +Y M +GI P + T+N L+
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375
Query: 471 AGLEKLGRVSDAEIYRKE--KKSIQADALS 498
AGL + G V A E K + AD ++
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVT 405
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 173/428 (40%), Gaps = 24/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + YT+ + + A ++ VF LM +G A TYT+++H L AG V A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ M+ C P Y + L R +EA + +E + G PN Y L++
Sbjct: 162 MTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
AG+ E AL++F M P+ LI CK+G+ +++ M E L
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ +Q N+ H Q + + + V D + ID L
Sbjct: 282 VVTYTALIQ----GQCNEG-----HLQCAFRLLHLMETNGLVPNDWTFSVLIDA-----L 327
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K++ + L ++ K ++++ V +++I+ C + D A + + +
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+Y +LI L + + ++E+M + G ++I L KIF
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 421 L------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ P+ TYT + Y G + A + M +G+ P+L T+N L+ G
Sbjct: 448 MIATGINPD----IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 475 KLGRVSDA 482
LG VS A
Sbjct: 504 NLGLVSQA 511
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 171/422 (40%), Gaps = 24/422 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT+++ + A I + K + G+ D+ YTS + AG + A ++ M
Sbjct: 74 TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L+ C T +YTA + L V+EA V+ M P+ + Y ++ L AG+
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EEA + + G +P+ N LI+ C AGE + + M NR + + E
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253
Query: 248 LQTFKVAD--ENDSLLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + E +L+ V P ++ T I+G ++G + +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVT-------YTALIQG--QCNEGHLQCAFRL 304
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+L+ + L+ + S +I+ C + + A L VK + + Y
Sbjct: 305 LHLMETNGLVP---------NDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+LI L K E++++M G + + LI L ++ A + + E
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415
Query: 424 D--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
Q TYT +I ++ KI+ M GI+P + T+ V + + GR+ D
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMED 475
Query: 482 AE 483
AE
Sbjct: 476 AE 477
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF D +Y++++D K++S + E M EKGI VTYT ++ L +
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
G I+++M P IV+YT +++ R+++A + +M+ RG+ PN TY L+
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G +A F M G +P++ + +L+
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 85/162 (52%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + +T++ ++D + +++ + + +KG+ ++ V YTS++ L G +D
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + ++M + P SY++ + L ++ +AT + ++M+++G+ + TYT+++
Sbjct: 370 AADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ LVR E +IF KM G+ PD + + C+ G
Sbjct: 430 DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEG 471
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF + Y ++D + A + VFE M + + TYT ++H L +G V+
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++ M P +V+YTA ++ ++ A + M GL PN +T++VL+
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ L + K EEA + + GV+ ++ LI+ CK G+
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N D TYT + + E R+ + + M ++G+ + VTY +++ +N G V A
Sbjct: 452 GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK------------EMIQRGLP 168
+ +E M K P SYT ++++ + D++K ++ +R LP
Sbjct: 512 FSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLP 571
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
Y+ + L R + EEA F MQ A + P + +I+ C
Sbjct: 572 LAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCC 619
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 98/176 (55%), Gaps = 2/176 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE-AKRISSMKYVFELMQEKGINIDAVTY 104
+++AW F + + +G + + TY T+++ + A R+ + +FE M++ G+ + +TY
Sbjct: 81 LKEAWALFEAM-KEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITY 139
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+++ D A I +EMK C P ++SYT + L + R+ EA ++++EM +
Sbjct: 140 NCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKE 199
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G PN +TY L++ R G+YE+A+ +F M++ G PD N +I+ C + G
Sbjct: 200 LGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGG 255
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 82/166 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+YTTM++ G + R+ +FE M+E G + ++ TY S++ + G + A+ ++ M
Sbjct: 173 SYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGM 232
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ + C P + +Y + + EA V+ EM ++G P+ TY +++ + +
Sbjct: 233 EDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRR 292
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
A ++ M+ AG PD NIL++ KAG + I +K
Sbjct: 293 GRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELK 338
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 5/193 (2%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+K L +S+T N +LK + EKA F + G D +TY T++D+ G
Sbjct: 197 MKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGME-DEGCIPDLYTYNTVIDMCGRGG 255
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+ + VF MQ KG D VTY +++ S A ++ + MK C P + +Y
Sbjct: 256 LFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYN 315
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ EA ++ E+ G PN +++ L+ R G +EEA + +M+
Sbjct: 316 ILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRAT 375
Query: 201 GVQPDKAA-CNIL 212
G P+ A C ++
Sbjct: 376 GCVPNATAYCGLM 388
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + +TY ++L + R +F M+++G D TY +V+ G A
Sbjct: 201 GRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEA 260
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM+ K C P V+Y + R A D+ K M + G P+ +TY +L++
Sbjct: 261 EGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDA 320
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+AG EA++IF +++ AG P+ + + LI
Sbjct: 321 AGKAGSASEAMQIFHELKAAGHSPNLVSFSALI 353
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G DR TY TMLD + + R + + + M+ G D TY ++ AG
Sbjct: 268 QRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSA 327
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ I+ E+K P +VS++A + + +EA + EM G PN Y L
Sbjct: 328 SEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGL 387
Query: 178 MEYLVRAGKYE 188
M G Y+
Sbjct: 388 MNSYSHHGMYK 398
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 36/200 (18%)
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T++ I G ++ + +FE M + G+ YT+++ + G + A ++E MK K
Sbjct: 35 TIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEK 94
Query: 131 ECYPTIVSYTAYMK-----------ILFLNDRVKE------------------------- 154
C P +++Y + ++ L + +K+
Sbjct: 95 GCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDT 154
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A+ + KEM PN +YT ++ L R+G+ +EA+E+F +M+E G P+ N L++
Sbjct: 155 ASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLK 214
Query: 215 KCCKAGETRTIILILRYMKE 234
+ G + + M++
Sbjct: 215 AYAREGRYEKAMCLFVGMED 234
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 131/362 (36%), Gaps = 63/362 (17%)
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
E+K C TI+S IL ++ A ++++ M + G+ P+ + YT L+ + G
Sbjct: 27 ELKEHNCV-TIIS------ILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSGYAKQG 79
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+EA +F M+E G P+ N LI C K A R P
Sbjct: 80 LLKEAWALFEAMKEKGCSPNVLTYNTLINACTKR------------------AYRLPDLV 121
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+ K A V P DI ++ + L L +
Sbjct: 122 GLFEEMKQAG--------VQPN-----------------DITYNCMVNACVCLSLFDTAS 156
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR--RRDGALLAFEYSVKMDLNLERTAY 363
+ + K++ VIS +N R R D A+ FE ++ + Y
Sbjct: 157 QILKEM-------KAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTY 209
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+L+ + + K + M G +Y +I G A +F L +
Sbjct: 210 NSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVF-LEMQ 268
Query: 424 DQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+ CT TY ++ Y +A + KTM R G P L T+N+LL K G S
Sbjct: 269 RKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSAS 328
Query: 481 DA 482
+A
Sbjct: 329 EA 330
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++ + L+ F ++I++EM V +I+ LG + R A ++F +
Sbjct: 139 YNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMK 198
Query: 423 EDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
E + + TY +L+ Y G +KA+ ++ M +G P L T+N ++ + G +
Sbjct: 199 ELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFA 258
Query: 481 DAE 483
+AE
Sbjct: 259 EAE 261
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 188/451 (41%), Gaps = 61/451 (13%)
Query: 61 GFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G D+ TY T +D + +S++ + ++ + I + V Y++++ L G
Sbjct: 212 GLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ N++ EM+ K +P IV+Y + ++ R A + +EM++R + PN TY L+
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
V+ GK+ EA E++ +M G+ P+ N +I+ CK + M +
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 391
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
F + + A D + +H +++ VT + ++ G L+
Sbjct: 392 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT-----VTYN-----TLIHGFCLV 441
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+L A L ++ + D +T+++ CD+ + AL F+ K ++L+
Sbjct: 442 ----GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 360 RT-----------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ Y LI LI F + E+ EEM G
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG------------------ 539
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
++P+ T TY+++I D+A +++ +M K P++ TFN
Sbjct: 540 -----------IVPD----TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNT 584
Query: 469 LLAGLEKLGRVSDA-EIY-RKEKKSIQADAL 497
L+ G K GRV D E++ ++ I ADA+
Sbjct: 585 LINGYCKAGRVDDGLELFCEMGRRGIVADAI 615
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 182/415 (43%), Gaps = 36/415 (8%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+++ M+ K I D ++T ++ + + A++ + ++ +P +V++T + L
Sbjct: 103 LYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLC 162
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
L+ RV EA D++ ++ + P+ T+T LM L R G+ EA+ + +M E G+QPD+
Sbjct: 163 LDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQI 218
Query: 208 ACNILIEKCCKAGETRTIILILRYMKE-----NRLALRYPVFKEALQTFKVADENDSLLW 262
++ CK G+T + + +LR M+E + + + + + +D ++ +
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK---NLVAIDSLLSGIMDK 319
P ++ N + I G S Q L+ +L++K N+V ++L++ + +
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFC--ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
++A + ++ + + Y ++I K +
Sbjct: 337 GKFFEAAEL-------------------YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGV 437
++ M G S V+ LI A+R ++ +P T TY LI
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
+ G + AL + + M G+ P + T N LL GL G++ DA E+++ +KS
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 189/490 (38%), Gaps = 76/490 (15%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A F+ + R D T+TT+++ R+ + + M E G+ D +TY
Sbjct: 167 VSEALDLFHQICRP-----DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYG 221
Query: 106 SVMHWLSNAGD---------------------------VDGAV---------NIWEEMKL 129
+ + + GD +DG N++ EM+
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD 281
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K +P IV+Y + ++ R A + +EM++R + PN TY L+ V+ GK+ E
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A E++ +M G+ P+ N +I+ CK + M + F +
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
+ A D + +H +++ VT + ++ G L+ +L A
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANT-----VTYN-----TLIHGFCLV----GDLNAA 447
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT-------- 361
L ++ + D +T+++ CD+ + AL F+ K ++L+ +
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507
Query: 362 ---AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y LI LI F + E+ EEM G + +I L R A ++F
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 419 ------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
S P T+ LI Y AG D L+++ M R+GI + L+ G
Sbjct: 568 VSMGSKSFSPN----VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 473 LEKLGRVSDA 482
K+G ++ A
Sbjct: 624 FRKVGNINGA 633
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 17 WDSAQDLLKNLPIKWDSYTV-------NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
W +AQ LL+ + + S V N +K E A L+ + R G + TY
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR--GIIPNTITY 361
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+M+D F + R+ + + +F LM KG + D T+T+++ A +D + + EM
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ V+Y + L + A D+ ++MI G+ P+ T L++ L GK ++
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481
Query: 190 ALEIFSKMQEA-----------GVQPDKAACNILI 213
ALE+F MQ++ GV+PD NILI
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILI 516
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEAKRISSMKYVFE 90
D+ + L+ M+K+ + + G D TY ++ + E K + + + ++E
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA-EELYE 533
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M +GI D +TY+S++ L +D A ++ M K P +V++ +
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
RV + +++ EM +RG+ + Y L+ + G AL+IF +M +GV PD
Sbjct: 594 RVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 648
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 157/401 (39%), Gaps = 50/401 (12%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ A++++ +M P+++ + M + +R +Y++M ++ + + Y++T+
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ K AL F K+ + G+ PD L+ C L +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLC-----------LDHRVSEA 170
Query: 237 LALRYPVFKEALQTF-----------KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT- 284
L L + + + + TF +V + L V P+ I+ V+ +
Sbjct: 171 LDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230
Query: 285 -DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS----------AVISTIIE 333
D L++ + + I K N+V +++ G+ DS + I+
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290
Query: 334 VNCDHRRRDGALLAFEYSVKMDL---NLER------TAYLALIGILIKLNTFPKVAEIVE 384
NC G ++ +S L LER Y ALI +K F + AE+ +
Sbjct: 291 YNC---MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSA 441
EM G +I R A +F L+ + C+ T+T LI Y A
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTTLIDGYCGA 406
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D +++ M R+G+ + T+N L+ G +G ++ A
Sbjct: 407 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M+D + R+ +F M K + + VT+ ++++ AG VD
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + + Y + + A D+++EMI G+ P+ T ++
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657
Query: 180 YLVRAGKYEEALEIFSKMQ 198
+ E A+ + +Q
Sbjct: 658 GFWSKEELERAVAMLEDLQ 676
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 20 AQDLLKNLP---IKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTM 72
A++L + +P I D+ T ++ + K E +F + S+S F+ + T+ T+
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS--FSPNVVTFNTL 585
Query: 73 LDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
++ + +A R+ +F M +GI DA+ Y ++++ G+++GA++I++EM
Sbjct: 586 INGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGV 645
Query: 133 YPTIVS 138
YP ++
Sbjct: 646 YPDTIT 651
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/498 (20%), Positives = 213/498 (42%), Gaps = 27/498 (5%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNH-DRFT 68
+++ +A LL + D++ N+V++ ++ A + RS G D F+
Sbjct: 137 RHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFS 196
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ + + S VF+ M + G+ + +TY +++ GD++ + ++M
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +V+Y + L R+ E + EM + P+ +TY++L + L R G+ +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
L +F++ + GV C+IL+ CK G+ + + L ++ +
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376
Query: 249 QTF-KVADENDS--LLWQVHPQ-FSPEFISDNDAV------EFVT-----------TDIE 287
+ +V D + + Q+ + P+ I+ N + E VT + ++
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
+ L+ L ++LS + K I+ D ++++ C + + A+
Sbjct: 437 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 496
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+ + D+ Y ++I I+ + +VE+M +G S + LL+ L
Sbjct: 497 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCR 556
Query: 408 ARRPVPAAK-IFSLLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+ + A + I++L + + +Y +I + G DKAL++ + M + GI P+L T
Sbjct: 557 SSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616
Query: 466 FNVLLAGLEKLGRVSDAE 483
+ L++ L GRV D E
Sbjct: 617 CHTLVSALASAGRVHDME 634
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 40/292 (13%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPME---KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+K+ I+ D T N ++ +E KA + +S G + T+ T++D +G A
Sbjct: 395 MKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKS-GVDPSVETFNTLIDAYGTAG 453
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP------ 134
++ V MQ+KGI D +++ SV+ G + AV I ++M K+ P
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513
Query: 135 -----------------------------TIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+IV+Y +K L + ++ EA ++ + +
Sbjct: 514 SIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ +Y ++ G ++ALE+ +M + G++P C+ L+ AG +
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDM 633
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
+ + M + ++ + + V ENDS + + + S + I+ +D
Sbjct: 634 ECLYQQMLHKNVEPSSSIYGIMVDAY-VRCENDSKVASLKKEMSEKGIAFDD 684
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 189/462 (40%), Gaps = 39/462 (8%)
Query: 44 PPMEKAWLFFNWVSRSRGFN---------------HDRFTYTTMLDIFGEAKRISSMKYV 88
P + FF+ V+ ++ FN H+ +T M++ F + V
Sbjct: 63 PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+ + G D T+ ++++ L V AV + M C P +V+Y + + +
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ A D+ ++M +R + + +TY+ +++ L R G + A+ +F +M+ G++
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQV 264
N L+ CKAG+ + +L+ M ++ F + F K+ + N+ +
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
SP I+ N S+ G + + L +++L ++ + D
Sbjct: 303 TKGISPNTITYN--------------SLMDGYCM----QNRLSEANNMLDLMVRNNCSPD 344
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+++I+ C +R D + F K L Y L+ + E+ +
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ 404
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAG 442
EM G V +L+ L + A +IF L + + YT +I G
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGG 464
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ A ++ ++ KG+ P++ T+ V+++GL K G +S+A I
Sbjct: 465 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 506
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 190/446 (42%), Gaps = 61/446 (13%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + TY ++++ ++ S + M E+ + D TY++++ L G +D A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++++EM+ K ++V+Y + + L + + + K+M R + PN T+ VL++
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
V+ GK +EA E++ +M G+ P+ N L++ Y +NRL
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDG---------------YCMQNRL--- 326
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQGLV 297
++ N+ L V SP+ ++ T+ I+G +D+G+
Sbjct: 327 -------------SEANNMLDLMVRNNCSPDIVT-------FTSLIKGYCKVKRVDEGMK 366
Query: 298 LIL-LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
L + K+ LVA ++ S +++ C + + A F+ V + +
Sbjct: 367 LFRKISKRGLVA---------------NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGV 411
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y L+ L K EI E++ K+ +L + + ++I + + A
Sbjct: 412 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWN 471
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+F LP + TYT +I GS +A + + M G P+ T+N L+
Sbjct: 472 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHL 531
Query: 475 KLGRVSDAEIYRKEKKS--IQADALS 498
+ G ++ + +E KS ADA S
Sbjct: 532 RDGDLTASAKLIEEMKSCGFSADASS 557
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 108/225 (48%), Gaps = 6/225 (2%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++ F +S+ RG + TY+ ++ F ++ ++ + +F+ M G+ D +TY
Sbjct: 361 VDEGMKLFRKISK-RGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYG 419
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L + G ++ A+ I+E+++ + IV YT ++ + +V++A +++ + +
Sbjct: 420 ILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCK 479
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN TYTV++ L + G EA + KM+E G +P+ N LI + G+
Sbjct: 480 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTAS 539
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
++ MK + K + A + W P+ SP
Sbjct: 540 AKLIEEMKSCGFSADASSIKMVIDMLSSA-----VWWFKEPRRSP 579
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 136/365 (37%), Gaps = 82/365 (22%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+++++EM P++V ++ + + + D K+M G+ N YT ++
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ R K A + K+ + G +PD N LI C + ++++ M EN
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN-- 164
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
P ++ N V + S D L
Sbjct: 165 -----------------------------GCQPNVVTYNSIVNGICK------SGDTSLA 189
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L LL+K + +++++ D STII+ C D A+ F+ +
Sbjct: 190 LDLLRKMD------------ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 237
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y +L+G L K + +++++MT +R+ +P
Sbjct: 238 SSLVTYNSLVGGLCKAGKWNDGVQLLKDMT--------------------SRKIIPNV-- 275
Query: 418 FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
T+ LI V+ G +A ++YK M KGI P+ T+N L+ G
Sbjct: 276 -----------ITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQN 324
Query: 478 RVSDA 482
R+S+A
Sbjct: 325 RLSEA 329
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 176/413 (42%), Gaps = 53/413 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + TY +L + ++ + + + M+E+ I +DAV Y+ ++ L G +D A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N++ EM++K I+ YT ++ R + + ++MI+R + P+ ++ L++
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
V+ GK EA E+ +M + G+ PD LI+ CK EN+L
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK---------------ENQLD-- 369
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQGLVLI 299
N L V P + N + + ++ ID GL L
Sbjct: 370 --------------KANHMLDLMVSKGCGPNIRTFNILINGYCKANL-----IDDGLEL- 409
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+K +L + + D+ +T+I+ C+ + + A F+ V + +
Sbjct: 410 -FRKMSL------------RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+Y L+ L K EI E++ K+ L + + ++IH + +A + A +F
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 420 LLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
LP + TY +IG GS +A +++ M G P+ T+N+L+
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 200/456 (43%), Gaps = 32/456 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G H+ +T + M++ +++S + + G D VT++++++ L G V
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + + M PT+++ A + L LN +V +A + M++ G PN TY +++
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ ++G+ A+E+ KM+E ++ D +I+I+ CK G + M+
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 240 RYPVFKEALQTFKVA---DENDSLLWQ-VHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQ 294
++ ++ F A D+ LL + + +P+ ++ + ++ FV EG L +
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK---EGKLREAE 337
Query: 295 GLVLILLKKK---NLVAIDSLLSGIMDKSIQLDSA--VISTIIEVNCDHRRRDGALL--- 346
L ++++ + V SL+ G K QLD A ++ ++ C R +L
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFC-KENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 347 ---------AFEYSVKMDLN---LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
E KM L + Y LI +L E+ +EM
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAGSADKALKIYK 452
+ +L+ L P A +IF + + + Y +I +A D A ++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRK 487
++ KG+ P + T+N+++ GL K G +S+A+ ++RK
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + D TYT+++D F + ++ ++ +LM KG + T+ +++ A +D
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ +M L+ V+Y ++ +++ A ++++EM+ R + P+ +Y +L++
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 180 YLVRAGKYEEALEIFSKMQEA-----------------------------------GVQP 204
L G+ E+ALEIF K++++ GV+P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKEN 235
D NI+I CK G L+ R M+E+
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 79/154 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY T++ F E ++ K +F+ M + + D V+Y ++ L + G+ +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+E+++ + I Y + + +V +A D++ + +G+ P+ TY +++
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L + G EA +F KM+E G P+ NILI
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 156/393 (39%), Gaps = 34/393 (8%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV++++EM P ++ ++ ++ + D+ K+M +G+ N YT +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ R K A K+ + G +PD + LI C G + ++ M E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG- 172
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG---PLSIDQ 294
K L T L +V +DAV + +E P +
Sbjct: 173 ------HKPTLITLNALVNGLCLNGKV-----------SDAVLLIDRMVETGFQPNEVTY 215
Query: 295 GLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
G VL ++ K A+ LL + ++ I+LD+ S II+ C D A F
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RLGSARR 410
+ Y LI + A+++ +M K + V + LI + G R
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 411 PVPAAKIF---SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
K + P+ T TYT+LI + DKA + M KG P++ TFN
Sbjct: 336 AEELHKEMIQRGISPD----TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 468 VLLAGLEKLGRVSDA-EIYRKEK-KSIQADALS 498
+L+ G K + D E++RK + + AD ++
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 207/506 (40%), Gaps = 84/506 (16%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY-------VFELMQEKGIN---ID 100
LF + R+R + F +L + SS ++ +F M + G+N D
Sbjct: 36 LFDELLPRARSASVHAFN--RVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNKLATD 93
Query: 101 AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE------------CYPTIVSYTAYMKILFL 148
A T+ ++ N G +D A+ EE + C P ++SY + LF
Sbjct: 94 ACTFGILIRCFCNVGLLDFALE--EESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFK 151
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA----------------GKYEEALE 192
V +A ++ EM+ +G PPN TY +++ L +A G+ EEA+
Sbjct: 152 EGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVR 211
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEALQ 249
+ KM G+QPD ++LI+ CK G E R I + +N A Y
Sbjct: 212 LLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYA 271
Query: 250 T-FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
T + D +D L + D + PL +LI KN
Sbjct: 272 TKGALVDMHDLLALMIQ-----------DGI---------PLEDHVFNILIRAYAKN-ET 310
Query: 309 IDSLLSGIMD---KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+D ++ ++ K + +T+I++ C R + A+ F V L+ + + +
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTS 370
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKIFSLL--- 421
LI L + + KV ++ EM G H ++L ++ L R + A F +
Sbjct: 371 LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIM-DSLCKEGRVLEAHDFFDQIIHV 429
Query: 422 ---PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P+ +YT LI Y G D+++K+ M G+ P T++ LL G K GR
Sbjct: 430 GVKPD----VVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGR 485
Query: 479 VSDA-EIYRKE-KKSIQADALSKDAV 502
V DA +YR+ K ++ +A++ + +
Sbjct: 486 VDDALALYREMFSKDVKPNAITYNII 511
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 161/396 (40%), Gaps = 51/396 (12%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M++KG + + VTYT+V+ L AG V+ AV+ + +M + P I+++T+ + L
Sbjct: 321 MRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGE 380
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
K+ + EMI RG+ PN +M+ L + G+ EA + F ++ GV+PD + I
Sbjct: 381 WKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTI 440
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
LI+ C G+ I +L M L + L + D L FS +
Sbjct: 441 LIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKD 500
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLI-LLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
P +I ++L L +VA I+D IQL +
Sbjct: 501 V---------------KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNI 545
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLE-RTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
++ C++ D AL F+ + LE RT + ++G+L K
Sbjct: 546 VLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLL-----------------KV 588
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALK 449
G R+G A+ A L+P+ Y +I + G +++ +
Sbjct: 589 G-------------RIGDAKSLFSAILPSGLVPD----AIIYGLMIQSHIEEGLLEESDE 631
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
++ +M + G + T N ++ L + G V A Y
Sbjct: 632 LFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTY 667
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/481 (20%), Positives = 192/481 (39%), Gaps = 42/481 (8%)
Query: 26 NLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
N P SY +N + K ++KA+ F+ + +GF + TY +++D +A+ +
Sbjct: 134 NCPPNVLSYNMVINGLFK-EGEVDKAYTLFHEM-LGQGFPPNIVTYNSVIDGLCKAQAMD 191
Query: 84 SMKYVFELMQEKG----------------INIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+ V + M +KG + D VTY+ ++ + G A NI++ M
Sbjct: 192 KAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSM 251
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +Y + + + D+ MIQ G+P + + +L+ +
Sbjct: 252 VRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETL 311
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
++A+ F +M++ G P+ +I+ CKAG + M L+ F
Sbjct: 312 DKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSL 371
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDN---DAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ E W+ + S E I+ +A+ F+ T ++ L K+
Sbjct: 372 IHGLCTIGE-----WKKVEKLSFEMINRGIHPNAI-FLNTIMDS-----------LCKEG 414
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
++ I+ ++ D + +I+ C + D ++ V + L + Y
Sbjct: 415 RVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYS 474
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
AL+ K + EM +++H L A R V A + + + +
Sbjct: 475 ALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS 534
Query: 425 --QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Q TY ++G D+AL++++ + K + TFN+++ GL K+GR+ DA
Sbjct: 535 GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDA 594
Query: 483 E 483
+
Sbjct: 595 K 595
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 77/165 (46%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+ + TY +L A R+ + + + + + GI + TY V+ L VD
Sbjct: 498 SKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVD 557
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ +++ ++ KE + ++ + L R+ +A ++ ++ GL P+ Y +++
Sbjct: 558 EALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMI 617
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ + G EE+ E+F M++ G + N ++ K + G+ R
Sbjct: 618 QSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVR 662
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 184/449 (40%), Gaps = 17/449 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ + RSR + ++ + +R + +++ M+ K I D ++
Sbjct: 60 LEDAIDLFSDMLRSRPL-PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFN 118
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + + A++ + ++ +P +V++T + L + DRV EA D + +M +
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFET 178
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN T+T LM L R G+ EA+ + +M E G+QP + +++ CK G+T +
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ +LR M+E + V A+ D S + N E
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS-------------DAQNLFTEMQEKG 285
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I L +++ + LL ++++ I D + +I + A
Sbjct: 286 IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAA 345
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
++ + + Y ++I K + ++ M G S V+ LI
Sbjct: 346 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 405
Query: 406 GSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A+R ++ +P T TY LI + G + AL + + M G+ P +
Sbjct: 406 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 465
Query: 464 GTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
T N LL GL G++ DA E+++ +KS
Sbjct: 466 VTCNTLLDGLCDNGKLKDALEMFKAMQKS 494
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 173/443 (39%), Gaps = 97/443 (21%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++D + R S + +F MQEKGI D TY S++ ++G A + +EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++ P +V+Y A + + EA ++Y EM+ RG+ PN TY +++ + + +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLD 377
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A ++F M G PD LI+ C A + +L M L + +
Sbjct: 378 AAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437
Query: 249 QTFK-VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
F V D N +L S + IS V DI V
Sbjct: 438 HGFCLVGDLNAAL------DLSQQMISSG-----VCPDI--------------------V 466
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT------ 361
++LL G+ CD+ + AL F+ K ++L+ +
Sbjct: 467 TCNTLLDGL-------------------CDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 507
Query: 362 -----AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y LI LI F + E+ EEM G
Sbjct: 508 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRG-------------------------- 541
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
++P+ T TY+++I D+A +++ +M K P++ TFN L+ G K
Sbjct: 542 ---IVPD----TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 594
Query: 477 GRVSDA-EIY-RKEKKSIQADAL 497
GRV D E++ ++ I ADA+
Sbjct: 595 GRVDDGLELFCEMGRRGIVADAI 617
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 129/535 (24%), Positives = 217/535 (40%), Gaps = 90/535 (16%)
Query: 29 IKWDSYTVNQVLKTHPPMEK---AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
I+ D Y+ N ++K K A F +++ G + D T+TT+L R+S
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITK-LGLHPDVVTFTTLLHGLCVEDRVSEA 168
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
F M E + VT+T++M+ L G + AV + + M PT ++Y +
Sbjct: 169 LDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDG 228
Query: 146 LFLNDRVKEATDVYKEMIQ-RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+ A ++ ++M + + PN Y+ +++ L + G++ +A +F++MQE G+ P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRL--------ALRYPVFKEALQTFKVADE 256
D N +I C +G +L+ M E ++ AL KE + F+ A+
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG-KFFEAAEL 347
Query: 257 NDSLLWQVHPQFSPEFISDN------------DAVE----------------FVTTDIEG 288
D +L + P I+ N DA E TT I+G
Sbjct: 348 YDEMLPR---GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 404
Query: 289 PLS---IDQGLVLIL-LKKKNLVA----IDSLLSGI---------MDKSIQL-DSAVIST 330
ID G+ L+ + ++ LVA ++L+ G +D S Q+ S V
Sbjct: 405 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 464
Query: 331 IIEVN------CDHRRRDGALLAFEYSVKMDLNLERT-----------AYLALIGILIKL 373
I+ N CD+ + AL F+ K ++L+ + Y LI LI
Sbjct: 465 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 524
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKC 427
F + E+ EEM G + +I L R A ++F S P
Sbjct: 525 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN---- 580
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T+ LI Y AG D L+++ M R+GI + L+ G K+G ++ A
Sbjct: 581 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 635
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEAKRISSMKYVFE 90
D+ + L+ M+K+ + + G D TY ++ + E K + + + ++E
Sbjct: 477 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA-EELYE 535
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M +GI D +TY+S++ L +D A ++ M K P +V++ +
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 595
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
RV + +++ EM +RG+ + Y L+ + G AL+IF +M +GV PD
Sbjct: 596 RVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 157/413 (38%), Gaps = 63/413 (15%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E G +++ S H + D A++++ +M P++V + M ++ +R
Sbjct: 40 EAGFGGESLKLQSGFHEIKGLED---AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD 96
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+Y++M ++ + + Y++ +L++ K AL F K+ + G+ PD L+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLL 156
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
C E+R++ EAL F H F E
Sbjct: 157 HGLC---------------VEDRVS-------EALDFF-------------HQMF--ETT 179
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ V F T L+ L ++ +V +LL +M+ +Q TI++
Sbjct: 180 CRPNVVTFTT------------LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
Query: 334 VNCDHRRRDGALLAFEYSVKMD----LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
C ++ + A KM+ + Y A+I L K + EM +
Sbjct: 228 GMC---KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKA 447
G ++ +I S+ R A ++ + E + TY ALI + G +A
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
++Y M +GI P+ T+N ++ G K R+ AE Y K D +
Sbjct: 345 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 397
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M+D + R+ +F M K + + VT+ ++++ AG VD
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 599
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + + Y + + A D+++EMI G+ P+ T ++
Sbjct: 600 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 180 YLVRAGKYEEALEIFSKMQ 198
+ E A+ + +Q
Sbjct: 660 GFWSKEELERAVAMLEDLQ 678
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E +F + S+S F+ + T+ T+++ + +A R+ +F M +GI DA+ Y +
Sbjct: 564 EATQMFVSMGSKS--FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 621
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+++ G+++GA++I++EM YP ++
Sbjct: 622 LIYGFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE-- 488
Y+A+I G A ++ M KGI P L T+N ++ G GR SDAE +E
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEML 317
Query: 489 KKSIQADALSKDAV 502
++ I D ++ +A+
Sbjct: 318 ERKISPDVVTYNAL 331
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 188/451 (41%), Gaps = 61/451 (13%)
Query: 61 GFNHDRFTYTTMLDIFGE-AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G D+ TY T +D + +S++ + ++ + I + V Y++++ L G
Sbjct: 212 GLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ N++ EM+ K +P IV+Y + ++ R A + +EM++R + PN TY L+
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
V+ GK+ EA E++ +M G+ P+ N +I+ CK + M +
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 391
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
F + + A D + +H +++ VT + ++ G L+
Sbjct: 392 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT-----VTYN-----TLIHGFCLV 441
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+L A L ++ + D +T+++ CD+ + AL F+ K ++L+
Sbjct: 442 ----GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 360 RT-----------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ Y LI LI F + E+ EEM G
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG------------------ 539
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
++P+ T TY+++I D+A +++ +M K P++ TFN
Sbjct: 540 -----------IVPD----TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNT 584
Query: 469 LLAGLEKLGRVSDA-EIY-RKEKKSIQADAL 497
L+ G K GRV D E++ ++ I ADA+
Sbjct: 585 LINGYCKAGRVDDGLELFCEMGRRGIVADAI 615
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 182/415 (43%), Gaps = 36/415 (8%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+++ M+ K I D ++T ++ + + A++ + ++ +P +V++T + L
Sbjct: 103 LYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLC 162
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
L+ RV EA D++ ++ + P+ T+T LM L R G+ EA+ + +M E G+QPD+
Sbjct: 163 LDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQI 218
Query: 208 ACNILIEKCCKAGETRTIILILRYMKE-----NRLALRYPVFKEALQTFKVADENDSLLW 262
++ CK G+T + + +LR M+E + + + + + +D ++ +
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK---NLVAIDSLLSGIMDK 319
P ++ N + I G S Q L+ +L++K N+V ++L++ + +
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFC--ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
++A + ++ + + Y ++I K +
Sbjct: 337 GKFFEAAEL-------------------YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGV 437
++ M G S V+ LI A+R ++ +P T TY LI
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
+ G + AL + + M G+ P + T N LL GL G++ DA E+++ +KS
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 189/490 (38%), Gaps = 76/490 (15%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A F+ + R D T+TT+++ R+ + + M E G+ D +TY
Sbjct: 167 VSEALDLFHQICRP-----DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYG 221
Query: 106 SVMHWLSNAGD---------------------------VDGAV---------NIWEEMKL 129
+ + + GD +DG N++ EM+
Sbjct: 222 TFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD 281
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K +P IV+Y + ++ R A + +EM++R + PN TY L+ V+ GK+ E
Sbjct: 282 KGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFE 341
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A E++ +M G+ P+ N +I+ CK + M + F +
Sbjct: 342 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 401
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
+ A D + +H +++ VT + ++ G L+ +L A
Sbjct: 402 GYCGAKRIDDGMELLHEMPRRGLVANT-----VTYN-----TLIHGFCLV----GDLNAA 447
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT-------- 361
L ++ + D +T+++ CD+ + AL F+ K ++L+ +
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507
Query: 362 ---AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y LI LI F + E+ EEM G + +I L R A ++F
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 419 ------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
S P T+ LI Y AG D L+++ M R+GI + L+ G
Sbjct: 568 VSMGSKSFSPN----VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 473 LEKLGRVSDA 482
K+G ++ A
Sbjct: 624 FRKVGNINGA 633
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 17 WDSAQDLLKNLPIKWDSYTV-------NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
W +AQ LL+ + + S V N +K E A L+ + R G + TY
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR--GIIPNTITY 361
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+M+D F + R+ + + +F LM KG + D T+T+++ A +D + + EM
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ V+Y + L + A D+ ++MI G+ P+ T L++ L GK ++
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481
Query: 190 ALEIFSKMQEA-----------GVQPDKAACNILI 213
ALE+F MQ++ GV+PD NILI
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILI 516
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEAKRISSMKYVFE 90
D+ + L+ M+K+ + + G D TY ++ + E K + + + ++E
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA-EELYE 533
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M +GI D +TY+S++ L +D A ++ M K P +V++ +
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
RV + +++ EM +RG+ + Y L+ + G AL+IF +M +GV PD
Sbjct: 594 RVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 648
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 153/390 (39%), Gaps = 28/390 (7%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ A++++ +M P+++ + M + +R +Y++M ++ + + Y++T+
Sbjct: 62 LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ K AL F K+ + G+ PD L+ C + + +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT--DIEGPLSIDQ 294
+ + + +V + L V P+ I+ V+ + D L++ +
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDS----------AVISTIIEVNCDHRRRDGA 344
+ I K N+V +++ G+ DS + I+ NC G
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC---MIGGF 298
Query: 345 LLAFEYSVKMDL---NLER------TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
++ +S L LER Y ALI +K F + AE+ +EM G
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYK 452
+I R A +F L+ + C+ T+T LI Y A D +++
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M R+G+ + T+N L+ G +G ++ A
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M+D + R+ +F M K + + VT+ ++++ AG VD
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + + Y + + A D+++EMI G+ P+ T ++
Sbjct: 598 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 657
Query: 180 YLVRAGKYEEALEIFSKMQ 198
+ E A+ + +Q
Sbjct: 658 GFWSKEELERAVAMLEDLQ 676
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E +F + S+S F+ + T+ T+++ + +A R+ +F M +GI DA+ Y +
Sbjct: 562 EATQMFVSMGSKS--FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYIT 619
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
+++ G+++GA++I++EM YP ++
Sbjct: 620 LIYGFRKVGNINGALDIFQEMISSGVYPDTIT 651
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y T+L G+ K+ S + ++E M++ G + D +Y ++ AG V+ AV I+
Sbjct: 436 DTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIF 495
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EE++ C P I+S+ + + L N + EA +KEM + GL P+ TY+ L+E +
Sbjct: 496 EELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT 555
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
K E A +F +M G P+ NIL++ ++G T + + +K+ L ++ Y
Sbjct: 556 DKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 615
Query: 242 PVFKE----ALQTFKVADENDSLLWQVHP 266
V + + Q +V +N W V P
Sbjct: 616 AVLERLQSGSHQKVRVRRKNPITGWVVSP 644
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 104/198 (52%), Gaps = 5/198 (2%)
Query: 20 AQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR--GFNHDRFTYTTMLD 74
A DLL + I D+ N VL ++K + + + G + D F+Y ++
Sbjct: 421 ALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILIS 480
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
FG A R+ +FE ++ D +++ S+++ L GD+D A ++EM+ + P
Sbjct: 481 SFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSP 540
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+V+Y+ ++ D+V+ A ++ EM+ G PN TY +L++ L R+G+ EA++++
Sbjct: 541 DVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLY 600
Query: 195 SKMQEAGVQPDKAACNIL 212
+K+++ G+ PD +L
Sbjct: 601 AKLKQQGLTPDSITYAVL 618
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 120/544 (22%), Positives = 226/544 (41%), Gaps = 78/544 (14%)
Query: 2 RDTISNVYKILKYSTWDSAQDL---LKNLPIKWDSYTVNQVLK--THPPMEKAWLFFNWV 56
RD I V KIL +S+ D DL L+ L + +++LK HP + + FF +
Sbjct: 85 RDLICKVTKIL-HSSSDPFPDLSEYLQTLNLTITPSEASEILKCLNHPHL--SLEFFRFC 141
Query: 57 SRS-RGFNHDRFTYTTMLDIFG------EAKRISSMKYVFELMQEKGI------------ 97
S + F H+ FTY +L I +++R+ ++ + + M+ G+
Sbjct: 142 SSNIPKFQHNSFTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGSISTINILIG 201
Query: 98 --------------------NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
++ TY ++ + + + A ++ E++ + I
Sbjct: 202 IFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIF 261
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y + L +++V + V+K+M ++ P+ YTYT+++ + GK +E+L +F +M
Sbjct: 262 AYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEM 321
Query: 198 QEAGVQPDKAACNILIEKCCKAGET-RTIILILRYMKE--NRLALR--YPVFKEALQTFK 252
E G P+ A N +I+ +TI L + + E N+ + Y L
Sbjct: 322 TEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLG 381
Query: 253 VADENDSL---LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
A E L +W H + D DA + + D G K A+
Sbjct: 382 HASEAHRLFCNMWSFHDE------GDRDAYMSMLESL-----CDAG--------KTTEAL 422
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
D LLS I +K I D+ + +T++ ++ +E + + + +Y LI
Sbjct: 423 D-LLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISS 481
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKC 427
+ + +I EE+ + + LI+ LG A F + E+
Sbjct: 482 FGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPD 541
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYR 486
TY+ LI + + A +++ M +G P++ T+N+LL LE+ GR ++A ++Y
Sbjct: 542 VVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYA 601
Query: 487 KEKK 490
K K+
Sbjct: 602 KLKQ 605
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 9/217 (4%)
Query: 20 AQDLLKNLP---IKWDSYTVNQVLKTHPPMEKA----WLFFNWVSRSRGFNHDRFTYTTM 72
A ++ + +P K D YT N ++ +++ WL + +S G + TY T+
Sbjct: 472 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE--GVVANTVTYNTL 529
Query: 73 LDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
++ F I + + M +G +D +TY S++ L AG+VD A +++E+M
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P+ +S + L + V+EA + KEM+ RG P+ T+ L+ L RAG+ E+ L
Sbjct: 590 VPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 649
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+F K+Q G+ PD N L+ CK G L+L
Sbjct: 650 MFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLL 686
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 193/476 (40%), Gaps = 44/476 (9%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
D L+N K + + ++L+ + + F+W +G+ H Y ++ G
Sbjct: 61 DSLRNSFHKITPFQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGE 120
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK-LKECYPTIVSYT 140
++ + M+++GI + S+M AG + EM+ + C PT SY
Sbjct: 121 FKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYN 180
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
++IL + K A +V+ +M+ R +PP +T+ V+M+ L + + AL + M +
Sbjct: 181 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKH 240
Query: 201 GVQPDKAACNILIE---KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
G P+ LI KC + E L+ ++E L P +TF N
Sbjct: 241 GCVPNSVIYQTLIHSLSKCNRVNEA------LQLLEEMFLMGCVP----DAETF-----N 285
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTD-IEG--PLSIDQGLVLILLKKKNLV-AIDSLL 313
D +L +F N+A + V I G P I G ++ L K V A L
Sbjct: 286 DVILGLC------KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF 339
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL-----LAFEYSVKMDLNLERTAYLALIG 368
I + S + +T+I H R D A + Y + D+ Y +LI
Sbjct: 340 YRIPKPT----SVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV----CTYNSLIY 391
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
K E++ +M G VY +L+ + A + + + D +
Sbjct: 392 GYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKP 451
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T + LI + +A++I++ M RKG P + TFN L++GL ++ + A
Sbjct: 452 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 166/424 (39%), Gaps = 52/424 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF D TY +++ + R+ + K +F + + +V + +++H G +D
Sbjct: 310 RGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----TSVIFNTLIHGFVTHGRLDD 365
Query: 120 AVNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +M P + +Y + + + V A +V ++M +G PN Y+YT+L+
Sbjct: 366 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILV 425
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + GK +EA + ++M G++P+ N LI CK + I R M
Sbjct: 426 DGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 485
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
F + DE LW + + IS+ VT + L+
Sbjct: 486 PDVYTFNSLISGLCEVDEIKHALWLLR-----DMISEGVVANTVTYNT---------LIN 531
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L++ + L++ ++ + LD +++I+ C D A FE ++ L
Sbjct: 532 AFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVP 591
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ LI L + + E +EM G +
Sbjct: 592 SSISCNILINGLCRSGMVEEAVEFQKEMVLRGST-------------------------- 625
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
P+ T+ +LI AG + L +++ + +GI P T+N L++ L K G
Sbjct: 626 ---PD----IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGF 678
Query: 479 VSDA 482
V DA
Sbjct: 679 VYDA 682
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 187/510 (36%), Gaps = 71/510 (13%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A +F++ +SR FT+ ++ + S V M + G ++V Y +++
Sbjct: 196 ANVFYDMLSRK--IPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLI 253
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
H LS V+ A+ + EEM L C P ++ + L DR+ EA + M+ RG
Sbjct: 254 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFT 313
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA---------------------------- 200
P+ TY LM L + G+ + A ++F ++ +
Sbjct: 314 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDM 373
Query: 201 ----GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKV 253
G+ PD N LI K G + +LR M+ Y + +
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK 433
Query: 254 ADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
DE +LL ++ P + N + + P +++ +
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE------------------I 475
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+ K + D +++I C+ AL + + Y LI ++
Sbjct: 476 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 535
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQK 426
+ ++V EM G L LI L A A +F L+P
Sbjct: 536 RGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSIS 595
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIY 485
C LI +G ++A++ K M +G P + TFN L+ GL + GR+ D ++
Sbjct: 596 CNI----LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 651
Query: 486 RKEKKSIQADALSKDAVPMEEKICDLLYGG 515
RK +QA+ + D V + L GG
Sbjct: 652 RK----LQAEGIPPDTVTYNTLMSWLCKGG 677
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A+ N +S + G + + ++ F + RI +F M KG D T+
Sbjct: 434 IDEAYNLLNEMS-ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 492
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L ++ A+ + +M + V+Y + +KEA + EM+ +
Sbjct: 493 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 552
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G + TY L++ L RAG+ ++A +F KM G+ P +CNILI C++G
Sbjct: 553 GSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSG 607
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRF 67
+ K D+A+DL +P K S N ++ TH ++ A + + S G D
Sbjct: 326 LCKIGRVDAAKDLFYRIP-KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 384
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +++ + + + V M+ KG + +YT ++ G +D A N+ EM
Sbjct: 385 TYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM 444
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P V + + R+ EA ++++EM ++G P+ YT+ L+ L +
Sbjct: 445 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 504
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ AL + M GV + N LI + GE +
Sbjct: 505 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 540
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 76/150 (50%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +++ A + + +FE M G+ +++ +++ L +G V+ AV
Sbjct: 557 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ 616
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM L+ P IV++ + + L R+++ +++++ G+PP+ TY LM +L +
Sbjct: 617 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKG 676
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIE 214
G +A + + E G P+ +IL++
Sbjct: 677 GFVYDACLLLDEGIEDGFVPNDRTWSILLQ 706
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 148/372 (39%), Gaps = 64/372 (17%)
Query: 190 ALEIFS-KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
++E+FS + G + +LI K GE +TI +L MK+ + + +F +
Sbjct: 88 SMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIM 147
Query: 249 QTFKVAD---ENDSLLWQVHPQFS--PEFISDNDAVEFVTT------------DIEG--- 288
+ + A + L+ ++ +S P F S N +E + + D+
Sbjct: 148 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 207
Query: 289 -PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ---LDSAVISTIIEVNCDHRRRDGA 344
P G+V+ L N +DS LS + D + +S + T+I R + A
Sbjct: 208 PPTLFTFGVVMKALCAVN--EVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 265
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS-----LGVYLGA 399
L E M + + +I L K + + A++V M G + G +
Sbjct: 266 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNG 325
Query: 400 LL-IHRLGSA-----RRPVPAAKIFSLLP---------EDQKCT--------------AT 430
L I R+ +A R P P + IF+ L +D K T
Sbjct: 326 LCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 385
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
Y +LI Y+ G AL++ + M KG P++ ++ +L+ G KLG++ +A E
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNE-- 443
Query: 491 SIQADALSKDAV 502
+ AD L + V
Sbjct: 444 -MSADGLKPNTV 454
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M +G D VT+ S+++ L AG ++ + ++ +++ + P V+Y M L
Sbjct: 619 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGF 678
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
V +A + E I+ G PN T+++L++ LV
Sbjct: 679 VYDACLLLDEGIEDGFVPNDRTWSILLQSLV 709
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 199/472 (42%), Gaps = 50/472 (10%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
++A L F+ + + G + TY+ ++D+F ++ + M + G+ Y S
Sbjct: 384 DEAELLFDRMGKI-GLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNS 442
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+++ GD+ A ++ EM K+ PT+V+YT+ M ++ +A +Y EM +G
Sbjct: 443 LINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ P+ YT+T L+ L RAG +A+++F++M E V+P++ N++IE C+ G
Sbjct: 503 IVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAF 562
Query: 227 LILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
L M E + Y L A E + +H + + E
Sbjct: 563 EFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK-------GNCELNEICY 615
Query: 284 TD----------IEGPLSI--DQGL-----------VLI--LLKKKNLVAIDSLLSGIMD 318
T +E LS+ D GL VLI LK K+ LL + D
Sbjct: 616 TGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHD 675
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ ++ D + +++I+ A ++ + Y A+I L K F
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG-FVN 734
Query: 379 VAEIVEEMTKAGHSL------GVYLGALLIHRLGSARRPVP--AAKIFSLLPEDQKCTAT 430
AEI+ + G+S+ G +L +L +G ++ V A + LL TAT
Sbjct: 735 EAEILCSKMRPGNSVPNQVTYGCFL-DILTKGVGDMKKAVELHNAILKGLLAN----TAT 789
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y LI + G ++A ++ M G+ P T+ +++ L + V A
Sbjct: 790 YNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 35/197 (17%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D YT+M+D + +++LM +G + VTYT+V++ L AG V+
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKIL--------------------------------- 146
A + +M+ P V+Y ++ IL
Sbjct: 736 AEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIR 795
Query: 147 --FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
R++EA+++ MI G+ P+C TYT ++ L R ++A+E+++ M E G++P
Sbjct: 796 GFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 205 DKAACNILIEKCCKAGE 221
D+ A N LI CC AGE
Sbjct: 856 DRVAYNTLIHGCCVAGE 872
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 186/460 (40%), Gaps = 52/460 (11%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEA------------------KRISSMKYVFELMQ 93
FFN++ RGF+H ++ ++ +A K +F +
Sbjct: 90 FFNFLGLHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYE 149
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
+ ++ + + H++ + +DG + M P + + +A + L
Sbjct: 150 KCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFG 209
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
A +++ +MI G+ P+ Y YT ++ L A E+ +M+ G + N+LI
Sbjct: 210 LAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLI 269
Query: 214 EKCCKAGETRTIILILRYMKENRL---ALRYPVFKEAL---QTFKVADENDSLLWQVHPQ 267
+ CK + + I + + L + Y L Q F+V E + ++ +
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRL--R 327
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
FSP + V++ +EG L K+ + +L+ + + + + V
Sbjct: 328 FSPSEAA-------VSSLVEG-----------LRKRGKVEEALNLVKRVAEFGVSPNIFV 369
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I+ C R D A L F+ K+ L Y LI + + + EM
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429
Query: 388 KAGHSLGVYLGALLIH---RLG--SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAG 442
G VY LI+ + G SA + A I L + TYT+L+G Y S G
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKL---EPTVVTYTSLMGGYCSKG 486
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+KAL++Y M KGI PS+ TF LL+GL + G + DA
Sbjct: 487 KINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDA 526
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 169/432 (39%), Gaps = 29/432 (6%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F+ M GI D YT V+ L D+ A + +M+ C IV Y + L
Sbjct: 214 LFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLC 273
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+V EA + K++ + L P+ TY L+ L + ++E LE+ +M P +A
Sbjct: 274 KKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEA 333
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
A + L+E K G+ + +++ + E ++ V+ + + D
Sbjct: 334 AVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDE-------- 385
Query: 268 FSPEFISDN-DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
E + D + D+ + ID + ++ L S L ++D ++
Sbjct: 386 --AELLFDRMGKIGLCPNDVTYSILID-----MFCRRGKLDTALSFLGEMIDMGLKPSVY 438
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+++I +C A + L Y +L+G K + EM
Sbjct: 439 PYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSA 444
T G +Y L+ L A A K+F+ + E + TY +I Y G+
Sbjct: 499 TGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNM 558
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPM 504
KA + M KGI P ++ L+ GL G+ S+A+++ D L K +
Sbjct: 559 SKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVF--------VDGLHKGNCEL 610
Query: 505 EEKIC--DLLYG 514
E IC LL+G
Sbjct: 611 NE-ICYTGLLHG 621
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 184/462 (39%), Gaps = 77/462 (16%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + YT ++ E K +S K + M+ G +++ V Y ++ L V A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 121 VNIWEEMKLKECYPTIVSY-----------------------------------TAYMKI 145
V I +++ KE P +V+Y ++ ++
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L +V+EA ++ K + + G+ PN + Y L++ L + ++EA +F +M + G+ P+
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN 401
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALR-YPVFKEALQTFKVAD--ENDSLLW 262
+ILI+ C+ G+ T + L M + L YP K D +SL+
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMA 461
Query: 263 Q-VHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQGLVLIL-LKKKNLV----AIDSLL 313
+ ++ + P ++ T+ + G S I++ L L + K +V +LL
Sbjct: 462 EMINKKLEPTVVT-------YTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLL 514
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
SG+ + D+ + T + E++VK + R Y +I +
Sbjct: 515 SGLFRAGLIRDAVKLFTEMA---------------EWNVKPN----RVTYNVMIEGYCEE 555
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT--- 430
K E + EM + G Y LIH L + AK+F C
Sbjct: 556 GNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQ-ASEAKVFVDGLHKGNCELNEIC 614
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
YT L+ + G ++AL + + M +G+ L + VL+ G
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG 656
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M KA+ F N + +G D ++Y ++ + S K + + + ++ + YT
Sbjct: 558 MSKAFEFLNEMIE-KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++H G ++ A+++ ++M L+ +V Y + + K + KEM R
Sbjct: 617 GLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR 676
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
GL P+ YT +++ + G ++EA I+ M G P++ +I CKAG
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQE--KGINIDAVTYTSVMHWLSNAGDVDGAVN 122
++ TY LDI K + MK EL KG+ + TY ++ G ++ A
Sbjct: 751 NQVTYGCFLDIL--TKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASE 808
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M P ++YT + L + VK+A +++ M ++G+ P+ Y L+
Sbjct: 809 LITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Query: 183 RAGKYEEALEIFSKMQEAGVQPD 205
AG+ +A E+ ++M G++P+
Sbjct: 869 VAGEMGKATELRNEMLRQGLKPN 891
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M+KA N + + G + TY ++ F R+ + M G++ D +TYT
Sbjct: 769 MKKAVELHNAILK--GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYT 826
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L DV A+ +W M K P V+Y + + + +AT++ EM+++
Sbjct: 827 TMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Query: 166 GLPPNCYT 173
GL PN T
Sbjct: 887 GLKPNTET 894
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 165/424 (38%), Gaps = 59/424 (13%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y +++ F + RI V + M+ K + D VTY ++ L + G +D A+ +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++ C PT+++YT ++ L V EA + EM+ RGL P+ +TY ++ + +
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G + A E+ ++ G +PD + NIL+ G+
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK----------------------- 313
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
W+ + + S+ VT I L+ L +
Sbjct: 314 -----------------WEEGEKLMTKMFSEKCDPNVVTYSI---------LITTLCRDG 347
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ +LL + +K + D+ +I C R D A+ E + + Y
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------ 418
++ L K + EI ++ + G S + L S+ + A +
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ P++ TY ++I G D+A ++ M HPS+ T+N++L G K R
Sbjct: 468 GIDPDE----ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 479 VSDA 482
+ DA
Sbjct: 524 IEDA 527
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAG 115
SRG D FTY T+ I G K + FE+++ KG D ++Y ++ L N G
Sbjct: 256 SRGLKPDMFTYNTI--IRGMCKE-GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ + +M ++C P +V+Y+ + L + +++EA ++ K M ++GL P+ Y+Y
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ R G+ + A+E M G PD N ++ CK G+ + I + E
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 61 GFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + + +Y TM ++ +I ++ + E+M GI+ D +TY S++ L G VD
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS-NGIDPDEITYNSMISCLCREGMVDE 491
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M+ E +P++V+Y + R+++A +V + M+ G PN TYTVL+E
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Query: 180 YLVRAGKYEEALEI 193
+ AG EA+E+
Sbjct: 552 GIGFAGYRAEAMEL 565
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D ++Y ++ F R+ E M G D V Y +V+ L G
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I+ ++ C P SY L+ + A + EM+ G+ P+ TY +
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ L R G +EA E+ M+ P NI++ CKA I +L M N
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS+ F+ D TY M+ ++ V + +TYT ++ G V
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ + +EM + P + +Y ++ + V A ++ + + +G P+ +Y +L
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L+ GK+EE ++ +KM P+ +ILI C+ G+ + +L+ MKE L
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 238 A 238
Sbjct: 365 T 365
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
AY ALI K+N +++ M S ++I L S + A K+ + L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
D Q TYT LI G D+ALK+ M +G+ P + T+N ++ G+ K G V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 480 SDA-EIYRK-EKKSIQADALS 498
A E+ R E K + D +S
Sbjct: 280 DRAFEMVRNLELKGCEPDVIS 300
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 162/431 (37%), Gaps = 63/431 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG FTY +L A + VF M G D+ Y+ ++H L AG
Sbjct: 138 RGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGE 197
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV + + K P + Y A + ++ A D++K M +G PN TYT L+
Sbjct: 198 AVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLIC 257
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++GK E A+ ++S+M EAG+ P+ LI+ C G +L M+ LA
Sbjct: 258 GFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLA- 316
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
N+ V D
Sbjct: 317 -----------------------------------PNEWTCLVLID-------------A 328
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K + L ++ K I+++ + +++I+ C + DGA + + +
Sbjct: 329 LCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPD 388
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y +LI L + N + ++ +M ++G + V L+ L R P K+
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSP--KMI 446
Query: 419 SLLPEDQKCTA-------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
S D+ A TYT I Y G + A + M G+ P+L T+N L+
Sbjct: 447 S----DRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIK 502
Query: 472 GLEKLGRVSDA 482
G LG VS A
Sbjct: 503 GYANLGLVSQA 513
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 195/465 (41%), Gaps = 47/465 (10%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G + TYT ++ F ++ ++ ++ M E G+ + VTYT+++ + G +
Sbjct: 241 QSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHL 300
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + M+ P + + L + R++EA ++Q+G+ N YT +
Sbjct: 301 EHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSM 360
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L ++GK++ A + K+ G PD + LI+ C+ + I +L M E+ +
Sbjct: 361 IDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGV 420
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI----------- 286
F + +D SP+ ISD A V D+
Sbjct: 421 QANAVPFTILIDKHLREFRSD----------SPKMISDRMAAAGVKPDVVTYTVFIRSYC 470
Query: 287 -EGPLSIDQGLVLILLK---KKNLVAIDSLLSGIMDKSIQLDS-AVISTIIEVNCDHRRR 341
+G + + +++ ++ + NL ++L+ G + + + + + +I+ C
Sbjct: 471 QDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDE 530
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIG---ILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
Y+V + L L++ +Y L+ L K+ + E++EE+ K S Y+
Sbjct: 531 -------SYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVY 583
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMC 455
I L R + AK F + + T + YT +I + +AL+ +M
Sbjct: 584 DCFIRCLSKVDR-LEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMV 642
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKD 500
++ P L ++ ++ L + G A KSI D LSK+
Sbjct: 643 KRNYLPRLESYRFIICALCEEGSFHTA-------KSIFGDILSKE 680
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--- 419
Y AL+ L + + M G + ++ ++++H L A R A + +
Sbjct: 147 YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAM 206
Query: 420 ---LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+P A Y ALI Y S G + A+ I+K M KG P++ T+ L+ G K
Sbjct: 207 GKGFVPN----VAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKS 262
Query: 477 GRVSDAEI 484
G+V A +
Sbjct: 263 GKVERAMV 270
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Query: 81 RISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+I MK + EL++E + + Y + LS ++ A + M+ P+
Sbjct: 557 KIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSED 616
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
YT ++ + +KEA M++R P +Y ++ L G + A IF +
Sbjct: 617 VYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDI 676
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
D+ A ILI+ + G T +L +M+E
Sbjct: 677 LSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQ 714
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
+ AWL + + R G + T+T ++D F + +I K ++++M + + D TYT+
Sbjct: 240 DAAWLLRDMMKR--GIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTA 297
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+++ L G +D A ++ M+ YP V+YT + + RV++ T ++ EM Q+G
Sbjct: 298 LINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKG 357
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L N TYTVL++ G+ + A E+F++M PD N+L++ C G +
Sbjct: 358 LVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKAL 417
Query: 227 LILRYMKENRLALRYPVFKEALQTF-KVADENDSL 260
+I +YM++ + + + +Q KV D+
Sbjct: 418 MIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAF 452
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L T+ +++A F ++ S G+ + TYTT++ F ++KR+ +F M +KG+
Sbjct: 302 LCTYGRLDEARQMF-YLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVA 360
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ +TYT ++ G D A ++ +M + P I +Y + L N V++A ++
Sbjct: 361 NTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIF 420
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
K M +R + N TYT++++ + + GK E+A ++F + G++P+ +I C+
Sbjct: 421 KYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 480
Query: 220 GETRTIILILRYMKEN 235
G + + MKE+
Sbjct: 481 GFIHEADALFKKMKED 496
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSR---------------GFNHDRFTYTTMLDIFGEAKRI 82
Q+L P + + N V RS GF D T+T++L F RI
Sbjct: 109 QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRI 168
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+F+ + G + VTYT+++H L ++ AV I+ +M P +V+Y +
Sbjct: 169 EDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSL 228
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ L R +A + ++M++RG+ PN T+T L++ V+ GK EA E++ M + V
Sbjct: 229 VSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSV 288
Query: 203 QPDKAACNILIEKCCKAGE 221
PD LI C G
Sbjct: 289 YPDVFTYTALINGLCTYGR 307
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + TYTT++ + + ++ +F M + GI + VTY S++ L G A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M + P ++++TA + ++ EA ++YK MIQ + P+ +TYT L+
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L G+ +EA ++F M+ G P++ LI CK+
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS 340
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 163/419 (38%), Gaps = 57/419 (13%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+T +L + + KR + +FE MQ GI+ T VM+ + + A +M
Sbjct: 85 FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM 144
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +V++T+ + +R+++A ++ +++ G PN TYT L+ L +
Sbjct: 145 KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLN 204
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A+EIF++M + G++P+ N L+ C+ G +LR M K +
Sbjct: 205 HAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDM-----------MKRGI 253
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
Q P I+ L+ +K ++
Sbjct: 254 Q--------------------PNVITFT------------------ALIDAFVKVGKIME 275
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
L ++ S+ D + +I C + R D A F Y LI
Sbjct: 276 AKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIH 335
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-----PE 423
K +I EM++ G +LI RP A ++F+ + P
Sbjct: 336 GFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPP 395
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D + TY L+ G +KAL I+K M ++ + ++ T+ +++ G+ K+G+V DA
Sbjct: 396 DIR---TYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDA 451
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 152/392 (38%), Gaps = 38/392 (9%)
Query: 136 IVSYTAYMKIL---FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
I +++ Y KIL N + EA D++ M+ P+ +T L+ + + +++ +
Sbjct: 44 IRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVIS 103
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF- 251
+F +MQ G+ P CNI++ C++ + L M + F L F
Sbjct: 104 LFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFC 163
Query: 252 ---KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI-------DQGLVLILL 301
++ D V F P ++ + + + ++ D G+
Sbjct: 164 HWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGI----- 218
Query: 302 KKKNLVAIDSLLSGI----------------MDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
+ N+V +SL+SG+ M + IQ + + +I+ + A
Sbjct: 219 -RPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAK 277
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
++ ++M + + Y ALI L + ++ M G+ LIH
Sbjct: 278 ELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGF 337
Query: 406 GSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
++R KIF + + T TYT LI Y G D A +++ M + P +
Sbjct: 338 CKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDI 397
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
T+NVLL GL G V A + K + + D
Sbjct: 398 RTYNVLLDGLCYNGYVEKALMIFKYMRKREMD 429
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 5/166 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN-----IDAVTYTSVMHWLSNAG 115
G + TY +L F + ++ F M+ +G N D V+YT+V+H L AG
Sbjct: 239 GIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAG 298
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+D A +++EM ++ C P+ +Y A +++ +++A V+ +M+++G PN TYT
Sbjct: 299 QLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYT 358
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
VL+ L AGK A+++ +M+ G +P+ N+LI + GE
Sbjct: 359 VLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGE 404
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 7/174 (4%)
Query: 46 MEKAWLFFNWVSRSRGFNH-----DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINID 100
++ AW FF + R RG N D +YTT+L G A ++ + VF+ M +G
Sbjct: 260 LQHAWDFFLQMKR-RGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPS 318
Query: 101 AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK 160
TY +++ G+++ AV ++++M K P +V+YT ++ L +V A +
Sbjct: 319 TATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLD 378
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILI 213
M G PN TY VL+ Y + G+ E+ L++F M + P++ NI+I
Sbjct: 379 RMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIII 432
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 5/177 (2%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D TY T+ D + K S + M E GI TY ++ +G + A
Sbjct: 205 FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAW 264
Query: 122 NIWEEMKLK-----ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ + +MK + C P +VSYT + L + ++ +A V+ EM G P+ TY
Sbjct: 265 DFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNA 324
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
L++ + G E+A+ +F M G P+ +LI C AG+ + +L MK
Sbjct: 325 LIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMK 381
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ + R +G+ + TYT ++ A ++ + + M+ +G + TY
Sbjct: 335 LEDAVAVFDDMVR-KGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYN 393
Query: 106 SVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKE---ATDVYKE 161
++ + G+++ ++++E M K +EC P +Y + +F+ R ++ A + E
Sbjct: 394 VLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVE 453
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
M+ RG P + + ++ L+ G E + E+ +MQE
Sbjct: 454 MVDRGYLPRKFMFNRVLNGLMLTGNQELSRELL-RMQE 490
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
++H LG A + A K+F + + + TATY ALI V G+ + A+ ++ M RKG
Sbjct: 290 VLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKG 349
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
P++ T+ VL+ GL G+V A
Sbjct: 350 YIPNVVTYTVLIRGLCHAGKVVRA 373
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ + + L + R +A + + + QR PP+ TY L + R AL+I +M
Sbjct: 178 FNSLLDALVKSRRASKAASLVRALEQR-FPPDAVTYNTLADGWCRVKDTSRALDILRQMV 236
Query: 199 EAGVQPDKAACNILIEKCCKAGE 221
E+G+ P KA NI+++ ++G+
Sbjct: 237 ESGIAPTKATYNIILKGFFRSGQ 259
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 184/459 (40%), Gaps = 43/459 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G D +L ++ R+ K VF ++ G++ D +TYT ++ S A
Sbjct: 467 KSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF 526
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV I+ +M C P +++ + + L+ R EA ++ ++ + L P TY L
Sbjct: 527 DEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 586
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM----- 232
+ L R GK +E + + +M + P+ N +++ CK G + +L M
Sbjct: 587 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 646
Query: 233 ---------------KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF--------S 269
KE R + +F Q KV + + L + P F +
Sbjct: 647 IPDLSSYNTVIYGLVKEERYNEAFSIF---CQMKKVLIPDYATLCTILPSFVKIGLMKEA 703
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
I D TD S+ +G+ LKK + I I LD +
Sbjct: 704 LHIIKDYFLQPGSKTDRSSCHSLMEGI----LKKAGIEKSIEFAEIIASSGITLDDFFLC 759
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKM---DLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+I+ C ++ AL A E K ++L+ Y +LI L+ N + EM
Sbjct: 760 PLIKHLCKQKK---ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM 816
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSA 444
+ G + LL+ +G + R K+ + + TY +I +
Sbjct: 817 KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRL 876
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++A+ +Y + +G P+ T+ LL GL K GR+ DAE
Sbjct: 877 EQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 915
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 185/444 (41%), Gaps = 87/444 (19%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W + DR TY T+LD FG+ S+ ++ M+ G N + V YT+V+ L
Sbjct: 324 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 383
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G V A+ +++EMK K P SY + + DR +A +++K M G PN YT+
Sbjct: 384 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 443
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ + Y ++G+ +A++ + M+ G+ PD A N ++ K+G
Sbjct: 444 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG-------------- 489
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
RL + VF E L+ V+ D++ + + + + ++AV+ IE D
Sbjct: 490 -RLGMAKRVFHE-LKAMGVSP--DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD- 544
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++A++SL I T+ + R D A F Y +K
Sbjct: 545 -----------VLAVNSL---------------IDTLYKAG----RGDEAWRIF-YQLK- 572
Query: 355 DLNLERT--AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++NLE T Y L+ L + +V ++EEM + +
Sbjct: 573 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY--------------------- 611
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
P I TY ++ G+ + AL + +M KG P L ++N ++ G
Sbjct: 612 PPNLI------------TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 659
Query: 473 LEKLGRVSDA-EIYRKEKKSIQAD 495
L K R ++A I+ + KK + D
Sbjct: 660 LVKEERYNEAFSIFCQMKKVLIPD 683
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 188/445 (42%), Gaps = 39/445 (8%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ + G + S +M+E GI ++A TY ++++L +G A+ ++ M
Sbjct: 162 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 221
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P++ +Y+ M V+ + +EM G+ PN Y+YT+ + L +A ++
Sbjct: 222 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 281
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+EA I +KM+ G +PD +LI+ C AG + MK++ +
Sbjct: 282 DEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 341
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDN--------DAVEFVTTDIEGPLSIDQGLVLI 299
L F ++ S++ ++ + +DN DA+ V E D+
Sbjct: 342 LDKFGDNGDSQSVM-EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE----- 395
Query: 300 LLKKKNLV----AIDSLLSGIMDKSIQLDSAVISTIIEVN------------CDHRRRDG 343
+K+K +V + +SL+SG + D+ + ++++ ++ + G
Sbjct: 396 -MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 454
Query: 344 ----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
A+ +E + + A A++ L K + E+ G S
Sbjct: 455 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 514
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA---LIGVYFSAGSADKALKIYKTMCR 456
++I A + A KIF + E+ C A LI + AG D+A +I+ +
Sbjct: 515 MMIKCCSKASKFDEAVKIFYDMIENN-CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKE 573
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSD 481
+ P+ GT+N LLAGL + G+V +
Sbjct: 574 MNLEPTDGTYNTLLAGLGREGKVKE 598
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D T+T ++ + +A RIS K VF M++ D VTY +++ + GD
Sbjct: 293 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 352
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ IW MK +V+YTA + L RV EA +++ EM Q+G+ P Y+Y L+
Sbjct: 353 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 412
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
++A ++ +ALE+F M G +P+ + I K+GE +I I RY
Sbjct: 413 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE--SIKAIQRY 463
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 181/434 (41%), Gaps = 56/434 (12%)
Query: 55 WVSR---SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
W+ R + G + ++YT + + G+AKR + M+ +G D +T+T ++ L
Sbjct: 251 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 310
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+AG + A +++ +MK + P V+Y + N + +++ M G N
Sbjct: 311 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 370
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
YT +++ L + G+ EALE+F +M++ G+ P++ + N LI +
Sbjct: 371 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG---------------F 415
Query: 232 MKENRLALRYPVFKEALQTFKVAD-ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+K +R F +AL+ FK D H F + ++++ + L
Sbjct: 416 LKADR-------FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ---RYEL 465
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+G+V ++VA +++L G+ KS +L A +R F
Sbjct: 466 MKSKGIV------PDVVAGNAVLFGLA-KSGRLGMA------------KR------VFHE 500
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
M ++ + Y +I K + F + +I +M + V LI L A R
Sbjct: 501 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGR 560
Query: 411 PVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A +IF L E + TY L+ G + + + + M P+L T+N
Sbjct: 561 GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 620
Query: 469 LLAGLEKLGRVSDA 482
+L L K G V+DA
Sbjct: 621 ILDCLCKNGAVNDA 634
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FTY +LD G++ RI M V E M KG VTY +++ L + ++ A
Sbjct: 820 GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 879
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ + + PT +Y + L R+++A +++ EM++ G NC Y +L+
Sbjct: 880 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 939
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
AG E+ +F M + G+ PD + I+I+
Sbjct: 940 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 194/464 (41%), Gaps = 32/464 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G ++++Y +++ F +A R +F+ M G + T+ +++ +G+
Sbjct: 397 KQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 456
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ +E MK K P +V+ A + L + R+ A V+ E+ G+ P+ TYT++
Sbjct: 457 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 516
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +A K++EA++IF M E PD A N LI+ KAG I +KE L
Sbjct: 517 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 576
Query: 238 ALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFIS-------------DNDAVE 280
+ L KV + L H + P I+ NDA++
Sbjct: 577 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 636
Query: 281 FV----TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ T LS ++ L+K++ S+ M K + D A + TI+
Sbjct: 637 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ-MKKVLIPDYATLCTILPSFV 695
Query: 337 DHRRRDGAL-LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
AL + +Y ++ +R++ +L+ ++K K E E + +G +L
Sbjct: 696 KIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDD 755
Query: 396 YLGALLIHRLGSARRPVPA---AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
+ LI L ++ + A K F K T Y +LI D A ++
Sbjct: 756 FFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK-TGLYNSLICGLVDENLIDIAEGLFA 814
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSD-----AEIYRKEKKS 491
M G P T+N+LL + K R+ + E++RK +S
Sbjct: 815 EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 858
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F M+E G D TY ++ + + ++ + + EEM K T V+Y + L
Sbjct: 812 LFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLV 871
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ R+++A D+Y ++ +G P TY L++ L++AG+ E+A +F++M E G + +
Sbjct: 872 KSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT 931
Query: 208 ACNILIEKCCKAGETRTIILILRYM 232
NIL+ AG T + + + M
Sbjct: 932 IYNILLNGHRIAGNTEKVCHLFQDM 956
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 176/446 (39%), Gaps = 59/446 (13%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F +R H + ML++ R+ M VF++MQ + + + T+ ++ L
Sbjct: 112 FRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 171
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G + A MK + G+ N Y
Sbjct: 172 VEGGLRSAPVALPVMK-----------------------------------EAGIVLNAY 196
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY L+ +LV++G EALE++ M GV P ++L+ K + T++ +LR M
Sbjct: 197 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 256
Query: 233 KENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEG 288
+ + + Y + L K DE +L ++ + P+ I+ ++ + G
Sbjct: 257 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCD--AG 314
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+S D V +KK + ++DK D+ +++E+ + + DG
Sbjct: 315 RIS-DAKDVFWKMKKSDQKPDRVTYITLLDKF--GDNGDSQSVMEI-WNAMKADG----- 365
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
N AY A+I L ++ + E+ +EM + G Y LI A
Sbjct: 366 -------YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 418
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTAL--IGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
R A ++F + YT + I Y +G + KA++ Y+ M KGI P +
Sbjct: 419 DRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAG 478
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKSI 492
N +L GL K GR+ A+ E K++
Sbjct: 479 NAVLFGLAKSGRLGMAKRVFHELKAM 504
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 75/168 (44%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F + S G D F ++ + K+ + + + G+++ Y S++ L
Sbjct: 742 FAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLV 801
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ +D A ++ EMK C P +Y + + + R++E V +EM ++G
Sbjct: 802 DENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYV 861
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
TY ++ LV++ + E+A++++ + G P L++ KAG
Sbjct: 862 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 909
>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
Length = 440
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY T++ +A+ + V M + G+ D +TY S++H ++G
Sbjct: 235 RGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKE 294
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I E+M P V+YT+ M L N R EA + MI+RGL PN TY+ L+
Sbjct: 295 AIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLH 354
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
G E ++ M G+QPD+ +ILI C K + + M++ RL
Sbjct: 355 GYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRL 412
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVDGAVNIW 124
F+Y +L R + +M + G + D V+Y++++ L GD D A + +
Sbjct: 170 FSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTY 229
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P +V+Y + L + +A DV M++ G+ P+C TY ++ +
Sbjct: 230 HEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSS 289
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII--LILRYMKEN 235
G+ +EA+ I KM GV+PD L++ CK G E R I+ +I R +K N
Sbjct: 290 GQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPN 345
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 14 YSTWDSAQDLLKN--LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
YST+ ++L+ LP T+ L M+KA N + ++ G D TY +
Sbjct: 226 YSTY---HEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKN-GVMPDCITYNS 281
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + + + + E M G+ DAVTYTS+M +L G A I + M +
Sbjct: 282 IVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRG 341
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P +++Y+ + + E D+ M++ G+ P+ + +++L+ + + A+
Sbjct: 342 LKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAM 401
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+FSKM++ + PD LI+ CK+G +L L
Sbjct: 402 FVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAMLNL 439
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 65 DRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D +Y+T++D +F E + E++ E+GI D VTY +++ L A +D A+++
Sbjct: 205 DVVSYSTIIDGLFKEGDSDKAYSTYHEML-ERGILPDVVTYNTIVAALCKAQAMDKAMDV 263
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
M P ++Y + + + + KEA + ++M G+ P+ TYT LM+YL +
Sbjct: 264 LNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCK 323
Query: 184 AGKYEEALEIFSKMQEAGVQPD 205
G+ EA +I M + G++P+
Sbjct: 324 NGRCIEARKILDSMIKRGLKPN 345
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 135/364 (37%), Gaps = 62/364 (17%)
Query: 53 FNWVSRSR--GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
FN ++RS TY ++ A R+ + +KG ++ + +T ++
Sbjct: 83 FNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKS 142
Query: 111 LSNAGDVDGAVNI-WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV----------- 158
L A+NI M C P + SY +K L R +EA ++
Sbjct: 143 LCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDC 202
Query: 159 --------------------------YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
Y EM++RG+ P+ TY ++ L +A ++A++
Sbjct: 203 PPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMD 262
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEAL- 248
+ ++M + GV PD N ++ C +G+++ I IL M + + A+ Y + L
Sbjct: 263 VLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLC 322
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+ + + L + P I+ + + T K LV
Sbjct: 323 KNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYAT------------------KGALVE 364
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ LL ++ IQ D V S +I H+ D A+ F + L + Y LI
Sbjct: 365 MRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLID 424
Query: 369 ILIK 372
L K
Sbjct: 425 GLCK 428
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 148/389 (38%), Gaps = 62/389 (15%)
Query: 103 TYTSVMHWLSNAGDVD----GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD- 157
TY ++ AG +D G N+ ++ E P I +T +K L R A +
Sbjct: 100 TYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVE--PII--FTPLLKSLCAEKRTSNAMNI 155
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG--VQPDKAACNILIEK 215
V + M + G P+ ++Y +L++ L + +EALE+ M + G PD + + +I+
Sbjct: 156 VLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDG 215
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
K G++ Y + E L+ P+ ++
Sbjct: 216 LFKEGDSDKA---------------YSTYHEMLER----------------GILPDVVTY 244
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N +V L K + + +L+ ++ + D ++I+
Sbjct: 245 NT------------------IVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGY 286
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C + A+ E + + Y +L+ L K + +I++ M K G V
Sbjct: 287 CSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNV 346
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKT 453
+ L+H + V + L+ + Q ++ LI + D A+ ++
Sbjct: 347 ITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSK 406
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M ++ + P + T+ L+ GL K GRV DA
Sbjct: 407 MRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 87/224 (38%), Gaps = 27/224 (12%)
Query: 313 LSGIMDKSIQLDSAVISTI------IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+SG + D AV T+ I C R D +K +E + L
Sbjct: 80 VSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPL 139
Query: 367 IGILIKLNTFPKVAEIV-EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
+ L IV MT+ G + V+ +L+ L R A ++ ++ +D
Sbjct: 140 LKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDG 199
Query: 426 -KC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
C +Y+ +I F G +DKA Y M +GI P + T+N ++A L K +
Sbjct: 200 GDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDK 259
Query: 482 AE--IYRKEKKSIQADAL--------------SKDAVPMEEKIC 509
A + R K + D + SK+A+ + EK+C
Sbjct: 260 AMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMC 303
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 184/459 (40%), Gaps = 43/459 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G D +L ++ R+ K VF ++ G++ D +TYT ++ S A
Sbjct: 557 KSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF 616
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV I+ +M C P +++ + + L+ R EA ++ ++ + L P TY L
Sbjct: 617 DEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 676
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM----- 232
+ L R GK +E + + +M + P+ N +++ CK G + +L M
Sbjct: 677 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 736
Query: 233 ---------------KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF--------S 269
KE R + +F Q KV + + L + P F +
Sbjct: 737 IPDLSSYNTVIYGLVKEERYNEAFSIF---CQMKKVLIPDYATLCTILPSFVKIGLMKEA 793
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
I D TD S+ +G+ LKK + I I LD +
Sbjct: 794 LHIIKDYFLQPGSKTDRSSCHSLMEGI----LKKAGIEKSIEFAEIIASSGITLDDFFLC 849
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKM---DLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+I+ C ++ AL A E K ++L+ Y +LI L+ N + EM
Sbjct: 850 PLIKHLCKQKK---ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM 906
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSA 444
+ G + LL+ +G + R K+ + + TY +I +
Sbjct: 907 KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRL 966
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++A+ +Y + +G P+ T+ LL GL K GR+ DAE
Sbjct: 967 EQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 1005
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 185/444 (41%), Gaps = 87/444 (19%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W + DR TY T+LD FG+ S+ ++ M+ G N + V YT+V+ L
Sbjct: 414 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 473
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G V A+ +++EMK K P SY + + DR +A +++K M G PN YT+
Sbjct: 474 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 533
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ + Y ++G+ +A++ + M+ G+ PD A N ++ K+G
Sbjct: 534 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG-------------- 579
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
RL + VF E L+ V+ D++ + + + + ++AV+ IE D
Sbjct: 580 -RLGMAKRVFHE-LKAMGVSP--DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD- 634
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++A++SL I T+ + R D A F Y +K
Sbjct: 635 -----------VLAVNSL---------------IDTLYKAG----RGDEAWRIF-YQLK- 662
Query: 355 DLNLERT--AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++NLE T Y L+ L + +V ++EEM + +
Sbjct: 663 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY--------------------- 701
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
P I TY ++ G+ + AL + +M KG P L ++N ++ G
Sbjct: 702 PPNLI------------TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 749
Query: 473 LEKLGRVSDA-EIYRKEKKSIQAD 495
L K R ++A I+ + KK + D
Sbjct: 750 LVKEERYNEAFSIFCQMKKVLIPD 773
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FTY +LD G++ RI M V E M KG VTY +++ L + ++ A
Sbjct: 910 GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 969
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ + + PT +Y + L R+++A +++ EM++ G NC Y +L+
Sbjct: 970 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 1029
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
AG E+ +F M + G+ PD + I+I+ CKAG+ + R + E L
Sbjct: 1030 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1089
Query: 239 -LRYPVFKEALQTFKVADENDSLL 261
+ Y + + L K +E SL
Sbjct: 1090 LITYNLLIDGLGKSKRLEEAVSLF 1113
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 185/445 (41%), Gaps = 39/445 (8%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ + G + S +M+E GI ++A TY ++++L +G A+ ++ M
Sbjct: 252 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 311
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P++ +Y+ M V+ + +EM G+ PN Y+YT+ + L +A ++
Sbjct: 312 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 371
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+EA I +KM+ G +PD +LI+ C AG + MK++ +
Sbjct: 372 DEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 431
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDN--------DAVEFVTTDIEGPLSIDQGLVLI 299
L F ++ S++ ++ + +DN DA+ V E D+
Sbjct: 432 LDKFGDNGDSQSVM-EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE----- 485
Query: 300 LLKKKNLV----AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+K+K +V + +SL+SG + D+ + ++++ +L Y K
Sbjct: 486 -MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 544
Query: 356 LN---LERTAYLALIGI-------------LIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ ++R + GI L K + E+ G S
Sbjct: 545 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 604
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA---LIGVYFSAGSADKALKIYKTMCR 456
++I A + A KIF + E+ C A LI + AG D+A +I+ +
Sbjct: 605 MMIKCCSKASKFDEAVKIFYDMIENN-CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKE 663
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSD 481
+ P+ GT+N LLAGL + G+V +
Sbjct: 664 MNLEPTDGTYNTLLAGLGREGKVKE 688
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D T+T ++ + +A RIS K VF M++ D VTY +++ + GD
Sbjct: 383 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 442
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ IW MK +V+YTA + L RV EA +++ EM Q+G+ P Y+Y L+
Sbjct: 443 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 502
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
++A ++ +ALE+F M G +P+ + I K+GE +I I RY
Sbjct: 503 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE--SIKAIQRY 553
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 181/434 (41%), Gaps = 56/434 (12%)
Query: 55 WVSR---SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
W+ R + G + ++YT + + G+AKR + M+ +G D +T+T ++ L
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+AG + A +++ +MK + P V+Y + N + +++ M G N
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 460
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
YT +++ L + G+ EALE+F +M++ G+ P++ + N LI +
Sbjct: 461 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG---------------F 505
Query: 232 MKENRLALRYPVFKEALQTFKVAD-ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+K +R F +AL+ FK D H F + ++++ + L
Sbjct: 506 LKADR-------FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ---RYEL 555
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+G+V ++VA +++L G+ KS +L A +R F
Sbjct: 556 MKSKGIV------PDVVAGNAVLFGLA-KSGRLGMA------------KR------VFHE 590
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
M ++ + Y +I K + F + +I +M + V LI L A R
Sbjct: 591 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGR 650
Query: 411 PVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A +IF L E + TY L+ G + + + + M P+L T+N
Sbjct: 651 GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 710
Query: 469 LLAGLEKLGRVSDA 482
+L L K G V+DA
Sbjct: 711 ILDCLCKNGAVNDA 724
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 194/464 (41%), Gaps = 32/464 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G ++++Y +++ F +A R +F+ M G + T+ +++ +G+
Sbjct: 487 KQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 546
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ +E MK K P +V+ A + L + R+ A V+ E+ G+ P+ TYT++
Sbjct: 547 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 606
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +A K++EA++IF M E PD A N LI+ KAG I +KE L
Sbjct: 607 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 666
Query: 238 ALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFIS-------------DNDAVE 280
+ L KV + L H + P I+ NDA++
Sbjct: 667 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 726
Query: 281 FV----TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ T LS ++ L+K++ S+ M K + D A + TI+
Sbjct: 727 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ-MKKVLIPDYATLCTILPSFV 785
Query: 337 DHRRRDGAL-LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
AL + +Y ++ +R++ +L+ ++K K E E + +G +L
Sbjct: 786 KIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDD 845
Query: 396 YLGALLIHRLGSARRPVPA---AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
+ LI L ++ + A K F K T Y +LI D A ++
Sbjct: 846 FFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK-TGLYNSLICGLVDENLIDIAEGLFA 904
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSD-----AEIYRKEKKS 491
M G P T+N+LL + K R+ + E++RK +S
Sbjct: 905 EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 948
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 194/495 (39%), Gaps = 70/495 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G + D TYT M+ +A + +F M E D + S++ L AG
Sbjct: 592 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 651
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A I+ ++K PT +Y + L +VKE + +EM PPN TY +
Sbjct: 652 DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 711
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--- 234
++ L + G +AL++ M G PD ++ N +I K I MK+
Sbjct: 712 LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI 771
Query: 235 ---NRLALRYPVF------KEALQTFK-----VADEND-----SLLWQVHPQFSPEFISD 275
L P F KEAL K + D SL+ + + E
Sbjct: 772 PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE---- 827
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLK-----KKNLVA------------------IDSL 312
++EF +++D + L+K KK L A +SL
Sbjct: 828 -KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSL 886
Query: 313 LSGIMDKS-IQLDSAVISTIIEVNCDHRRRD--------GALLAFEYSVKMDLNLERTAY 363
+ G++D++ I + + + + E+ C G + E +K+ + R Y
Sbjct: 887 ICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGY 946
Query: 364 LA-------LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ +I L+K + ++ + G S L+ L A R A
Sbjct: 947 ESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAEN 1006
Query: 417 IFSLLPE---DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+F+ + E CT Y L+ + AG+ +K +++ M +GI+P + ++ +++ L
Sbjct: 1007 LFNEMLEYGCKANCT-IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 1065
Query: 474 EKLGRVSDAEIYRKE 488
K G+++D Y ++
Sbjct: 1066 CKAGQLNDGLTYFRQ 1080
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
L++N +S+ GF+ TY +LD +A RI + +F M E G + Y +++
Sbjct: 972 LYYNLMSQ--GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 1029
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
AG+ + +++++M + P I SYT + L ++ + ++++++ GL P+
Sbjct: 1030 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1089
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
TY +L++ L ++ + EEA+ +F++MQ+ G+ P+ N LI KAG+
Sbjct: 1090 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKA 1141
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 157/429 (36%), Gaps = 51/429 (11%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F + S G D F ++ + K+ + + + G+++ Y S++ L
Sbjct: 832 FAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLV 891
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ +D A ++ EMK C P +Y + + + R++E V +EM ++G
Sbjct: 892 DENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYV 951
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY ++ LV++ + E+A++++ + G P L++ KAG + M
Sbjct: 952 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 1011
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
E ++ L ++A
Sbjct: 1012 LEYGCKANCTIYNILLNGHRIAG------------------------------------- 1034
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
N + L ++D+ I D + II+ C + + L F +
Sbjct: 1035 ------------NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL 1082
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+M L + Y LI L K + + EM K G +Y LI LG A +
Sbjct: 1083 EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAA 1142
Query: 413 PAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A K++ LL + K TY ALI Y +GS D A Y M G P+ T +
Sbjct: 1143 EAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNC 1202
Query: 471 AGLEKLGRV 479
+ E +G V
Sbjct: 1203 SSPEAVGTV 1211
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 158/427 (37%), Gaps = 58/427 (13%)
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA---YM-KILFLNDRVKEATDVYKEM 162
V+H L +A DG E + P + TA YM +++ + RV + +V+ M
Sbjct: 185 VIHALRSA---DGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVM 241
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++ + N T+ + L G A M+EAG+ + N L+ K+G
Sbjct: 242 QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFD 301
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
R + + R M + + + + F + +++LW + + + N V
Sbjct: 302 REALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLR-EMEAHGVKPN--VYSY 358
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
T I +L + K +L+ + ++ + D + +I+V CD R
Sbjct: 359 TICIR-----------VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRIS 407
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A F K D +R Y+ L+ V EI M G++ V +I
Sbjct: 408 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 467
Query: 403 HRLGSARRPVPAAKIF------SLLPEDQKCTA--------------------------- 429
L R A ++F ++PE +
Sbjct: 468 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPK 527
Query: 430 ----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
T+ I Y +G + KA++ Y+ M KGI P + N +L GL K GR+ A+
Sbjct: 528 PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 587
Query: 486 RKEKKSI 492
E K++
Sbjct: 588 FHELKAM 594
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 186/431 (43%), Gaps = 35/431 (8%)
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYT 140
ISS + VF+ M + G++++ T+ +++ G ++ A+ + E M + + P V+Y
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+K + R+ + ++ +M + GL PN TY L+ + G +EA +I M++
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE----------ALQT 250
V PD NILI C AG R + ++ MK +L + +L+
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 251 FKVAD--ENDSL-LWQVHPQFSPEFISDNDAVEFVT------TDIEGPLSID----QGLV 297
K+ + END + QV S +++ + E VT D+ G S D L+
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG-FSPDIVTYHTLI 423
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
LK +L ++ + K I++++ ++TI++ C R+ D A + K
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
++ Y LI + K E+ +EM K + V LI L + A +
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 418 F------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
F LLP+D +T+ ++I Y G +KA + Y + P T N+LL
Sbjct: 544 FDELAESGLLPDD----STFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 472 GLEKLGRVSDA 482
GL K G A
Sbjct: 600 GLCKEGMTEKA 610
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 87/177 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + T T+LD + +++ + ++G +D VTY +++ V+
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +W+EMK + PT+ ++ + + L + + + A + + E+ + GL P+ T+ ++
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
+ G+ E+A E +++ + +PD CNIL+ CK G T + + E R
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 180/434 (41%), Gaps = 28/434 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF---ELMQEKGINIDAVTYTSVMHWLSNA 114
+ G +R TY + ++G K + S+K F ELM++ + D TY +++ L NA
Sbjct: 267 KKNGLVPNRVTYNNL--VYGYCK-LGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G + + + + MK + P +V+Y + F EA + ++M G+ N T+
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ +++L + K E ++ + G PD + LI+ K G+ + ++R M
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 234 ENRLALRYPVFK---EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+ + + +AL + DE +LL H + FI D V + T
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR---GFIVDE--VTYGT------- 491
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
L++ +++ + + + I + +++I C H + + A+ F+
Sbjct: 492 -----LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ L + + + ++I K K E E K Y +L++ L
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 411 PVPAAKIFSLLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A F+ L E+++ T TY +I + +A + M KG+ P T+N
Sbjct: 607 TEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 470 LAGLEKLGRVSDAE 483
++ L + G++S+ +
Sbjct: 667 ISLLMEDGKLSETD 680
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 8/246 (3%)
Query: 29 IKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK ++ T+N +L +++A N + RGF D TY T++ F +++
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHK-RGFIVDEVTYGTLIMGFFREEKVEKA 505
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+++ M++ I T+ S++ L + G + A+ ++E+ P ++ + +
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
RV++A + Y E I+ P+ YT +L+ L + G E+AL F+ + E + D
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVD 624
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLW 262
N +I CK + + +L M+E L Y F L E D LL
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Query: 263 QVHPQF 268
+ +F
Sbjct: 685 KFSGKF 690
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 184/459 (40%), Gaps = 43/459 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G D +L ++ R+ K VF ++ G++ D +TYT ++ S A
Sbjct: 432 KSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF 491
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV I+ +M C P +++ + + L+ R EA ++ ++ + L P TY L
Sbjct: 492 DEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 551
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM----- 232
+ L R GK +E + + +M + P+ N +++ CK G + +L M
Sbjct: 552 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 611
Query: 233 ---------------KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF--------S 269
KE R + +F Q KV + + L + P F +
Sbjct: 612 IPDLSSYNTVIYGLVKEERYNEAFSIF---CQMKKVLIPDYATLCTILPSFVKIGLMKEA 668
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
I D TD S+ +G+ LKK + I I LD +
Sbjct: 669 LHIIKDYFLQPGSKTDRSSCHSLMEGI----LKKAGIEKSIEFAEIIASSGITLDDFFLC 724
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKM---DLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+I+ C ++ AL A E K ++L+ Y +LI L+ N + EM
Sbjct: 725 PLIKHLCKQKK---ALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM 781
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSA 444
+ G + LL+ +G + R K+ + + TY +I +
Sbjct: 782 KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRL 841
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
++A+ +Y + +G P+ T+ LL GL K GR+ DAE
Sbjct: 842 EQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 880
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 3/208 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FTY +LD G++ RI M V E M KG VTY +++ L + ++ A
Sbjct: 785 GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 844
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ + + PT +Y + L R+++A +++ EM++ G NC Y +L+
Sbjct: 845 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 904
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
AG E+ +F M + G+ PD + I+I+ CKAG+ + R + E L
Sbjct: 905 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 964
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVH 265
+ Y + + L K +E SL ++
Sbjct: 965 LITYNLLIDGLGKSKRLEEAVSLFNEMQ 992
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 185/444 (41%), Gaps = 87/444 (19%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W + DR TY T+LD FG+ S+ ++ M+ G N + V YT+V+ L
Sbjct: 289 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQV 348
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G V A+ +++EMK K P SY + + DR +A +++K M G PN YT+
Sbjct: 349 GRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTH 408
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ + Y ++G+ +A++ + M+ G+ PD A N ++ K+G
Sbjct: 409 VLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSG-------------- 454
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
RL + VF E L+ V+ D++ + + + + ++AV+ IE D
Sbjct: 455 -RLGMAKRVFHE-LKAMGVSP--DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD- 509
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++A++SL I T+ + R D A F Y +K
Sbjct: 510 -----------VLAVNSL---------------IDTLYKAG----RGDEAWRIF-YQLK- 537
Query: 355 DLNLERT--AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++NLE T Y L+ L + +V ++EEM + +
Sbjct: 538 EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY--------------------- 576
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
P I TY ++ G+ + AL + +M KG P L ++N ++ G
Sbjct: 577 PPNLI------------TYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 624
Query: 473 LEKLGRVSDA-EIYRKEKKSIQAD 495
L K R ++A I+ + KK + D
Sbjct: 625 LVKEERYNEAFSIFCQMKKVLIPD 648
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 187/446 (41%), Gaps = 41/446 (9%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ + G + S +M+E GI ++A TY ++++L +G A+ ++ M
Sbjct: 127 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVM 186
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P++ +Y+ M V+ + +EM G+ PN Y+YT+ + L +A ++
Sbjct: 187 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRF 246
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+EA I +KM+ G +PD +LI+ C AG + MK++ +
Sbjct: 247 DEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 306
Query: 248 LQTFKVADENDSL-LWQVHPQFSPEFISDN--------DAVEFVTTDIEGPLSIDQGLVL 298
L F D DS + ++ + +DN DA+ V E D+
Sbjct: 307 LDKF--GDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE---- 360
Query: 299 ILLKKKNLV----AIDSLLSGIMDKSIQLDSAVISTIIEVN------------CDHRRRD 342
+K+K +V + +SL+SG + D+ + ++++ ++ +
Sbjct: 361 --MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKS 418
Query: 343 G----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
G A+ +E + + A A++ L K + E+ G S
Sbjct: 419 GESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITY 478
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA---LIGVYFSAGSADKALKIYKTMC 455
++I A + A KIF + E+ C A LI + AG D+A +I+ +
Sbjct: 479 TMMIKCCSKASKFDEAVKIFYDMIENN-CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 537
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ P+ GT+N LLAGL + G+V +
Sbjct: 538 EMNLEPTDGTYNTLLAGLGREGKVKE 563
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D T+T ++ + +A RIS K VF M++ D VTY +++ + GD
Sbjct: 258 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQ 317
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ IW MK +V+YTA + L RV EA +++ EM Q+G+ P Y+Y L+
Sbjct: 318 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 377
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
++A ++ +ALE+F M G +P+ + I K+GE +I I RY
Sbjct: 378 SGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE--SIKAIQRY 428
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 181/434 (41%), Gaps = 56/434 (12%)
Query: 55 WVSR---SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
W+ R + G + ++YT + + G+AKR + M+ +G D +T+T ++ L
Sbjct: 216 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 275
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+AG + A +++ +MK + P V+Y + N + +++ M G N
Sbjct: 276 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNV 335
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
YT +++ L + G+ EALE+F +M++ G+ P++ + N LI +
Sbjct: 336 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG---------------F 380
Query: 232 MKENRLALRYPVFKEALQTFKVAD-ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+K +R F +AL+ FK D H F + ++++ + L
Sbjct: 381 LKADR-------FGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ---RYEL 430
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+G+V ++VA +++L G+ KS +L A +R F
Sbjct: 431 MKSKGIV------PDVVAGNAVLFGLA-KSGRLGMA------------KR------VFHE 465
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
M ++ + Y +I K + F + +I +M + V LI L A R
Sbjct: 466 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGR 525
Query: 411 PVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A +IF L E + TY L+ G + + + + M P+L T+N
Sbjct: 526 GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 585
Query: 469 LLAGLEKLGRVSDA 482
+L L K G V+DA
Sbjct: 586 ILDCLCKNGAVNDA 599
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 194/464 (41%), Gaps = 32/464 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G ++++Y +++ F +A R +F+ M G + T+ +++ +G+
Sbjct: 362 KQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGES 421
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ +E MK K P +V+ A + L + R+ A V+ E+ G+ P+ TYT++
Sbjct: 422 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 481
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +A K++EA++IF M E PD A N LI+ KAG I +KE L
Sbjct: 482 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 541
Query: 238 ALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFIS-------------DNDAVE 280
+ L KV + L H + P I+ NDA++
Sbjct: 542 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 601
Query: 281 FV----TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ T LS ++ L+K++ S+ M K + D A + TI+
Sbjct: 602 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ-MKKVLIPDYATLCTILPSFV 660
Query: 337 DHRRRDGAL-LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
AL + +Y ++ +R++ +L+ ++K K E E + +G +L
Sbjct: 661 KIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDD 720
Query: 396 YLGALLIHRLGSARRPVPA---AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
+ LI L ++ + A K F K T Y +LI D A ++
Sbjct: 721 FFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK-TGLYNSLICGLVDENLIDIAEGLFA 779
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSD-----AEIYRKEKKS 491
M G P T+N+LL + K R+ + E++RK +S
Sbjct: 780 EMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 823
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
L++N +S+ GF+ TY +LD +A RI + +F M E G + Y +++
Sbjct: 847 LYYNLMSQ--GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 904
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
AG+ + +++++M + P I SYT + L ++ + ++++++ GL P+
Sbjct: 905 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 964
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
TY +L++ L ++ + EEA+ +F++MQ+ G+ P+ N LI KAG+
Sbjct: 965 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKA 1016
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 194/495 (39%), Gaps = 70/495 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G + D TYT M+ +A + +F M E D + S++ L AG
Sbjct: 467 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 526
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A I+ ++K PT +Y + L +VKE + +EM PPN TY +
Sbjct: 527 DEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 586
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--- 234
++ L + G +AL++ M G PD ++ N +I K I MK+
Sbjct: 587 LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI 646
Query: 235 ---NRLALRYPVF------KEALQTFK-----VADEND-----SLLWQVHPQFSPEFISD 275
L P F KEAL K + D SL+ + + E
Sbjct: 647 PDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIE---- 702
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLK-----KKNLVA------------------IDSL 312
++EF +++D + L+K KK L A +SL
Sbjct: 703 -KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSL 761
Query: 313 LSGIMDKS-IQLDSAVISTIIEVNCDHRRRD--------GALLAFEYSVKMDLNLERTAY 363
+ G++D++ I + + + + E+ C G + E +K+ + R Y
Sbjct: 762 ICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGY 821
Query: 364 LA-------LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ +I L+K + ++ + G S L+ L A R A
Sbjct: 822 ESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAEN 881
Query: 417 IFSLLPE---DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+F+ + E CT Y L+ + AG+ +K +++ M +GI+P + ++ +++ L
Sbjct: 882 LFNEMLEYGCKANCT-IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 940
Query: 474 EKLGRVSDAEIYRKE 488
K G+++D Y ++
Sbjct: 941 CKAGQLNDGLTYFRQ 955
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 152/416 (36%), Gaps = 51/416 (12%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F + S G D F ++ + K+ + + + G+++ Y S++ L
Sbjct: 707 FAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLV 766
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ +D A ++ EMK C P +Y + + + R++E V +EM ++G
Sbjct: 767 DENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYV 826
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY ++ LV++ + E+A++++ + G P L++ KAG + M
Sbjct: 827 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 886
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
E ++ L ++A
Sbjct: 887 LEYGCKANCTIYNILLNGHRIAG------------------------------------- 909
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
N + L ++D+ I D + II+ C + + L F +
Sbjct: 910 ------------NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL 957
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+M L + Y LI L K + + EM K G +Y LI LG A +
Sbjct: 958 EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAA 1017
Query: 413 PAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A K++ LL + K TY ALI Y +GS D A Y M G P+ T+
Sbjct: 1018 EAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++D G++KR+ +F MQ+KGI + TY S++ L AG A
Sbjct: 960 GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1019
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
++EE+ K P + +Y A ++ ++ A Y MI G PN TY L
Sbjct: 1020 GKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 176/446 (39%), Gaps = 59/446 (13%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F +R H + ML++ R+ M VF++MQ + + + T+ ++ L
Sbjct: 77 FRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 136
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G + A MK + G+ N Y
Sbjct: 137 VEGGLRSAPVALPVMK-----------------------------------EAGIVLNAY 161
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY L+ +LV++G EALE++ M GV P ++L+ K + T++ +LR M
Sbjct: 162 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 221
Query: 233 KENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEG 288
+ + + Y + L K DE +L ++ + P+ I+ ++ + G
Sbjct: 222 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCD--AG 279
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+S D V +KK + ++DK D+ +++E+ + + DG
Sbjct: 280 RIS-DAKDVFWKMKKSDQKPDRVTYITLLDKF--GDNGDSQSVMEI-WNAMKADG----- 330
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
N AY A+I L ++ + E+ +EM + G Y LI A
Sbjct: 331 -------YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKA 383
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTAL--IGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
R A ++F + YT + I Y +G + KA++ Y+ M KGI P +
Sbjct: 384 DRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAG 443
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKSI 492
N +L GL K GR+ A+ E K++
Sbjct: 444 NAVLFGLAKSGRLGMAKRVFHELKAM 469
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 179/438 (40%), Gaps = 55/438 (12%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+TY ++D + R VF + G+ D +Y +++ S G+VD A ++ +
Sbjct: 123 YTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYK 182
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + P +V+Y + + L + ++ V ++M+ G+ PN TY L+ AG
Sbjct: 183 MIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGM 242
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++E++ +F +M +G+ P CN I C + NR+ KE
Sbjct: 243 WKESVRVFKEMSSSGLIPCVVNCNSFIHALC---------------RHNRI-------KE 280
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK-- 304
A F DS++ + P+ P IS + + EG + LV +++ K
Sbjct: 281 AKDIF------DSMVLK-GPK--PNIISYSTLLHGYAA--EGCFANMNSLVNLMVSKGIV 329
Query: 305 ------NLVAIDSLLSGIMDKSIQL-----------DSAVISTIIEVNCDHRRRDGALLA 347
N++ G+MDK++ + D+ +T+I C R D AL
Sbjct: 330 PNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHK 389
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE-MTKAGHSLGVYLGALLIHRLG 406
F + V + + Y LI K E++ E M K GV + +I+ L
Sbjct: 390 FNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLF 449
Query: 407 SARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
R I L+ + + T+ +L+ Y G+ ++A + M GI P+
Sbjct: 450 KEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCY 509
Query: 465 TFNVLLAGLEKLGRVSDA 482
+ L+ G K GR+ DA
Sbjct: 510 IYGTLVDGYCKNGRIDDA 527
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 204/487 (41%), Gaps = 75/487 (15%)
Query: 46 MEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
++KA+ LF+ + +S + D TY +++D + K + + V E M + GI + TY
Sbjct: 173 VDKAYELFYKMIEQS--VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTY 230
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
S+++ S AG +V +++EM P +V+ +++ L ++R+KEA D++ M+
Sbjct: 231 NSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVL 290
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+G PN +Y+ L+ G + + + M G+ P+ NILI + G
Sbjct: 291 KGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDK 350
Query: 225 IILILRYMKENRLALRYPVFKEALQTF-KVADENDSL--------------------LWQ 263
+LI M+ + F + + ++ +D+L L Q
Sbjct: 351 AMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQ 410
Query: 264 ---VHPQF--SPEFISD-------NDAVEFVTTDI-----EGPLSIDQGLVLILL---KK 303
H + + E IS+ V++ ++ I EG ++ + ++ +++ ++
Sbjct: 411 GCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQR 470
Query: 304 KNLVAIDSLLSGI-----MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
N+V +SL+ G M+++ L A+ S IE NC
Sbjct: 471 PNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNC---------------------- 508
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y L+ K + +M G L +++H L ARR A K+F
Sbjct: 509 --YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMF 566
Query: 419 SLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ E + TY ++G D+A + + + + + TFN++++ + K+
Sbjct: 567 HEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKV 626
Query: 477 GRVSDAE 483
GR +A+
Sbjct: 627 GRRQEAK 633
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G Y +L +A+R ++ K +F M E G + TY V+ L D
Sbjct: 537 KGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDE 596
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + E++ I+++ + + R +EA +++ + GL P +TY +++
Sbjct: 597 ANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMIS 656
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L++ YEEA +F ++++G PD N ++ K E L + EN L L
Sbjct: 657 NLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTL 716
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRG 61
I+N++K + + DL+ + + T N +++ + ME+A+ + ++ S G
Sbjct: 445 INNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA-SIG 503
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
+ + Y T++D + + RI VF M KG+ +V Y ++H L A A
Sbjct: 504 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAK 563
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
++ EM +I +Y + L N+ EA + +++ + + T+ +++ +
Sbjct: 564 KMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 623
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
++ G+ +EA E+F+ + G+ P N++I K
Sbjct: 624 LKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIK 660
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 184/428 (42%), Gaps = 42/428 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG+ D TYTT++ RIS +F MQ+ G +A+TY ++M L G++
Sbjct: 160 RGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISI 219
Query: 120 AVNIWEEMKLKECY------PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
A+ + +EM P ++SY+ + L + R EA D+++EM +G+ P +
Sbjct: 220 ALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVIS 279
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
YT LM +EEA +F++M GVQP+ N+LI+ CK G+ +L M
Sbjct: 280 YTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMI 331
Query: 234 ENRLALRYPVFKEALQTFKVADENDSL--LWQVHPQ--FSPEFISDNDAVE--FVTTDIE 287
+ + + ++ F + + +S L+ P P+ I + T+ +E
Sbjct: 332 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 391
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
+ + G+ L + K+ ++ +LL+G+ D+ + +++V
Sbjct: 392 EAMKLYNGM-LQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV------------- 437
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
Y + DL + Y + L K + E+ ++ L + LI L
Sbjct: 438 --YGIPGDLYI----YGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 491
Query: 408 ARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
A + A ++F LP++ Q TY +I + G KA +++ M + G P T
Sbjct: 492 AGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKIT 551
Query: 466 FNVLLAGL 473
+ L+ G
Sbjct: 552 YATLIRGF 559
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
D A+DL + + ++ + TV + T E+A FN + ++G + T+ ++D+
Sbjct: 259 DEARDLFEEMKVQGMTPTV--ISYTSLMWEEAKRLFNEMV-NQGVQPNVVTFNVLIDVLC 315
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ ++ K + E+M ++GI + +TY S++ GD++ A ++ M K C P ++
Sbjct: 316 KEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVI 375
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
YT + +V+EA +Y M+Q G P+ TY L+ L + GK +A ++F M
Sbjct: 376 CYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM 435
Query: 198 QEAGVQPDKAACNILIEKCCKAG 220
+ G+ D I + CK G
Sbjct: 436 KVYGIPGDLYIYGIFLNGLCKNG 458
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 175/419 (41%), Gaps = 74/419 (17%)
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
G I + ++ F LM ++T ++ L+ ++ +M+L P
Sbjct: 73 GNITAIQAFQF-FHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDC 131
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+ + L +RV E V +++RG P+ TYT L++ L + +A +F++
Sbjct: 132 CTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTR 191
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
MQ+ G P+ L++ C+ G +++ + +E L
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGN---------------ISIALKLHQEML-------- 228
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID-------QGLVLILLKKKNLV-- 307
NDS L+ ++ F P IS + ++ + D + D QG+ ++ +L+
Sbjct: 229 NDSSLYGIN--FKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWE 286
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
L + ++++ +Q + + +I+V C ++G ++ E +++ ++R
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLC----KEGKVI--EAKDLLEVMIQR------- 333
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
GI+ L T+ + E G L+ L SAR ++F +P + C
Sbjct: 334 GIVPNLLTYNSLIE----------------GFCLVGDLNSAR------ELFVSMP-SKGC 370
Query: 428 ---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
YT LI Y ++A+K+Y M + G P + T+ LL GL + G+V DA+
Sbjct: 371 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 429
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 184/467 (39%), Gaps = 49/467 (10%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
++T +L + K S + Y++ M+ GI+ D T +++ L N V + + +
Sbjct: 98 SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGI 157
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P IV+YT +K L + R+ +A ++ M + G PN TY LM+ L R G
Sbjct: 158 LRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNI 217
Query: 188 EEALEIFSKMQE------AGVQPDKAACNILIEKCCK---AGETRTIILILRYMKENRLA 238
AL++ +M +P + +I+I+ CK E R + ++
Sbjct: 218 SIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTV 277
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ Y SL+W+ + E ++ VT ++ L+
Sbjct: 278 ISY----------------TSLMWEEAKRLFNEMVNQGVQPNVVTFNV---------LID 312
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+L K+ ++ LL ++ + I + +++IE C + A F
Sbjct: 313 VLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEP 372
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV-YLGALLI-----HRLGSARRPV 412
+ Y LI K + + ++ M + G V GALL ++G A++
Sbjct: 373 DVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLF 432
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K++ +P D Y + G +A++++ + I + FN L+ G
Sbjct: 433 GVMKVYG-IPGD---LYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDG 488
Query: 473 LEKLGRVSDA-EIYRKEKKSIQADALSKDAVPMEEKICDLLYGGDGV 518
L K G++ A E++ K + + L D V I + GG V
Sbjct: 489 LCKAGKLETAWELFEK----LPQEELQPDVVTYNIMIHEFCRGGQVV 531
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 9/236 (3%)
Query: 18 DSAQDLLKNLPIKWD-----SYTV--NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
+SA++L ++P K YTV N KT +E+A +N + + G D TY
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSK-VEEAMKLYNGMLQV-GKRPDVKTYG 413
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+L + ++ K +F +M+ GI D Y ++ L G + A+ ++ ++K
Sbjct: 414 ALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSY 473
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
I + + L +++ A ++++++ Q L P+ TY +++ R G+ +A
Sbjct: 474 NIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 533
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+F KM++ G PDK LI ++ + ++ +L M + ++L + +
Sbjct: 534 NILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNILRH 589
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 204/482 (42%), Gaps = 63/482 (13%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTML----------DIFG------EAKRISSMKYV---- 88
A F++W + GF+H FT ++L D G +SS +
Sbjct: 79 ALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNVSSFNILLRGF 138
Query: 89 -----FEL-------MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
FE+ M+ +GI + T+ ++ L D+D AV+ + + +C PT+
Sbjct: 139 AARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTL 198
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+YT + L +V+ A DV++EMI++G P+ Y+ L++ L +AG+ +EA ++
Sbjct: 199 FTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDL 258
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR----------LALRYPVFKE 246
M G P A ++ CK G + + ++ M+ R + Y +
Sbjct: 259 MVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK 318
Query: 247 ALQTFKVADE-------NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ---GL 296
+ F V +E D++ + + + +A + T +E D G+
Sbjct: 319 VEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGI 378
Query: 297 VLILLKKKNLVAIDSLLSGIMDK-SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
++ K+ +A + + +MDK +++ + + + I++ R + AL ++ +K
Sbjct: 379 IIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG 438
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL--GVYLGALLIHRLGSARRPVP 413
+ Y +I L KL + E++ EM + L + +++IH LG
Sbjct: 439 ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGME-- 496
Query: 414 AAKIFSLLPE--DQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
+ F LL E D TYT+LI AG +A+++ + M + GI P T+
Sbjct: 497 -ERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGT 555
Query: 469 LL 470
L+
Sbjct: 556 LV 557
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 4/202 (1%)
Query: 33 SYTV--NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
+YTV + + K H +E+A F + R +G+ D Y++++D +A R+ + + +
Sbjct: 200 TYTVLVDGLCKAHK-VERACDVFEEMIR-KGYKPDIIAYSSLIDGLSKAGRVDEARKLVD 257
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
LM +G AV YTS++ L G + AV +EM+ + P + +Y+ +
Sbjct: 258 LMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMG 317
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+V++A V +EM R P+ +YT+ +E L G+ EEA ++F M E G +PD
Sbjct: 318 KVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYG 377
Query: 211 ILIEKCCKAGETRTIILILRYM 232
I+I+ CK G +LR M
Sbjct: 378 IIIDNFCKEGSMAAATHVLRLM 399
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
TY+ ++ G ++ + F+L+ E G+ D TYTS++ L+ AG V A+ +
Sbjct: 482 TYSMIIHGLG---KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELL 538
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
EEM +P +Y ++IL +D V A D+ +EM++ G PN +T+
Sbjct: 539 EEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTF 587
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 126/326 (38%), Gaps = 33/326 (10%)
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G +T L+ LVR G +AL F Q + +P+ ++ NIL+ + +
Sbjct: 91 GFSHTLFTRNSLLLALVRGGHLSDALGFF---QSSISEPNVSSFNILLRGFAARDDFEVV 147
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+LR MK + + V AL + D+ S V P
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPN--------------- 192
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
E L LV L K + + ++ K + D S++I+ R D
Sbjct: 193 --KCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVD 250
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A + V AY +++ L K + + ++EM + V + ++
Sbjct: 251 EARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIV 310
Query: 403 HR-LGSARRPVPAAKIFSLLPE--DQKC---TATYTALIGVYFSAGSADKALKIYKTMCR 456
+G + K F+++ E D+ C T +YT I +S G ++A K+++TM
Sbjct: 311 TGYIGMGK----VEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVE 366
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
KG P + T+ +++ K G ++ A
Sbjct: 367 KGCKPDMHTYGIIIDNFCKEGSMAAA 392
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/470 (20%), Positives = 187/470 (39%), Gaps = 24/470 (5%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
++NL D V VL + E A FF WV RS F H+R T+ +++I G A +++
Sbjct: 3 IRNLVPSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M +KG+ D + ++ AG V +V ++++M+ TI SY A
Sbjct: 63 HARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALF 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K++ R A + +M+ G+ P +T+ V+M +GK E A F M+ +
Sbjct: 123 KVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIM 182
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD N ++ C+ + MK + + ++ + D D L
Sbjct: 183 PDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRL 242
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ- 322
V F +A+ + T L+ L + + S+L +++K I
Sbjct: 243 VEEMKG--FGMKPNAITYST------------LLPGLCNAEKMSEARSILKEMVEKYIAP 288
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D+++ +I C D A + +++ + E Y LI K + K ++
Sbjct: 289 TDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKL 348
Query: 383 VEEMTKAG---------HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA 433
++++ + H L+ + + + A + L+ +
Sbjct: 349 LDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNT 408
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI + GS D A ++ K M R+ + +++ L+ K +DA+
Sbjct: 409 LIRGHSQEGSPDSAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAK 458
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G L L+I G A + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 184/471 (39%), Gaps = 61/471 (12%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKAW+ + + R R T+ M+++ + ++ K LM+ GI + VTY +
Sbjct: 173 EKAWVLYAEMFRMR-IKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNT 231
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++H + G V+GA I++ MK + P +Y +++ + +++EA+ + ++M + G
Sbjct: 232 IIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIG 291
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC---CKAGETR 223
L P TY L++ G E A + KM G+ P + N+LI CK E
Sbjct: 292 LRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEAD 351
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
II + M E L T+ + V F+ + D E ++
Sbjct: 352 GII---KEMSEKGLV-------PDSVTYNILINGYCRCGNVKKAFT---LHD----EMIS 394
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
I+ L+ +L K+ + D L I+ K I D + + +I+ +C + D
Sbjct: 395 KGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDR 454
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A + +M + + + L+ + E++EEM G
Sbjct: 455 AFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG------------- 501
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ P+ +Y LI Y G A ++ M G +P+L
Sbjct: 502 ----------------IKPDH----ISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTL 541
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
T+N L+ GL K AE KE +SK P + L+ G
Sbjct: 542 LTYNALIQGLCKNEEGDHAEQLLKE-------MISKGITPNDNTYLSLIEG 585
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 23 LLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
L++ L IK + T N ++ + +E A + F+ + + RG D +TY + + +
Sbjct: 216 LMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLM-KCRGVKPDSYTYGSFISGMCKE 274
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
++ + E M+E G+ AVTY +++ N G+++ A + ++M + PT+ +Y
Sbjct: 275 GKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTY 334
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+ LFL+ ++ EA + KEM ++GL P+ TY +L+ R G ++A + +M
Sbjct: 335 NMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMIS 394
Query: 200 AGVQPDKAACNILIEKCCKAGETR 223
G+QP + LI K G +
Sbjct: 395 KGIQPTRVTYTSLIYVLSKRGRMK 418
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A ++K + K DS T N ++ + ++KA+ + + S+G R TYT+
Sbjct: 348 DEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMI-SKGIQPTRVTYTS 406
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + + R+ +FE + KGI D + + +++ G++D A + +EM +
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P V++ M+ +V+ A ++ +EM RG+ P+ +Y L+ + G ++A
Sbjct: 467 VVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAF 526
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ +M G P N LI+ CK E
Sbjct: 527 RVRDEMLSIGFNPTLLTYNALIQGLCKNEE 556
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 164/421 (38%), Gaps = 24/421 (5%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E KR F++M+ KG+ ++ + + A ++ EM ++V
Sbjct: 133 ELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVV 192
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
++ + +L ++K+A + M G+ PN TY ++ G+ E A IF M
Sbjct: 193 TFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLM 252
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
+ GV+PD I CK G+ +L MKE + LR A
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKE--IGLR-----------PTAVTY 299
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
++L+ + + E D + V + +S L+ L + D ++ +
Sbjct: 300 NTLIDGYCNKGNLEMAFDYRD-KMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMS 358
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+K + DS + +I C A + + + R Y +LI +L K
Sbjct: 359 EKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMK 418
Query: 378 KVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE-DQKCT----ATY 431
+ ++ E++ + G + AL+ + + F++L E DQ T+
Sbjct: 419 QADDLFEKIVRKGIFPDLIMFNALIDGHCANGN----MDRAFAMLKEMDQMKVVPDEVTF 474
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
L+ G + A ++ + M +GI P ++N L++G K G + DA R E S
Sbjct: 475 NTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS 534
Query: 492 I 492
I
Sbjct: 535 I 535
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPP---MEKAWLFFNWVSRS 59
S +Y + K A DL + + K D N ++ H M++A+ + +
Sbjct: 406 SLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQM 465
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ D T+ T++ ++ + + + E M+ +GI D ++Y +++ S GD+
Sbjct: 466 K-VVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKD 524
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +EM PT+++Y A ++ L N+ A + KEMI +G+ PN TY L+E
Sbjct: 525 AFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 140/363 (38%), Gaps = 63/363 (17%)
Query: 148 LNDRVKEATDVYKEM-IQRGLPPNCYTYTVLMEYLVRA----GKYEEALEIFSKMQEAGV 202
+N V +V+ E+ + RG+ TY VL + L+RA + ++A E F M+ GV
Sbjct: 95 INSGVYSIREVFNELGVARGVL-GIKTY-VLYDLLIRACCELKRGDDAFECFDMMKGKGV 152
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
P ACN ++ K+ T ++ M R+ K ++ TF + + L
Sbjct: 153 IPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRI-------KSSVVTFNIMI--NVLCK 203
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG------- 315
+ + + EFI GL+ L K N+V ++++ G
Sbjct: 204 EGKLKKAKEFI---------------------GLMEALGIKPNVVTYNTIIHGYCSRGRV 242
Query: 316 -----IMD----KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
I D + ++ DS + I C + + A E ++ L Y L
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH------RLGSARRPVPAAKIFSL 420
I + ++M + G V +LIH ++ A + L
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+P+ + TY LI Y G+ KA ++ M KGI P+ T+ L+ L K GR+
Sbjct: 363 VPD----SVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMK 418
Query: 481 DAE 483
A+
Sbjct: 419 QAD 421
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 179/459 (38%), Gaps = 50/459 (10%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E AW V RS G + +T M++ + + +K M+ GI D VTY
Sbjct: 99 VELAWEVHREVVRS-GIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYN 157
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G ++ A I M K P++ +Y A + L R A + EM+
Sbjct: 158 TLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI 217
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ TY L+ R + EA EIF +M GV PD + + LI +
Sbjct: 218 GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQA 277
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
++ R MK+ L ++ + + N ++L + I D + D
Sbjct: 278 LVYFRDMKKFGLVPDNVIYTVLMHGYC---RNGNMLEALK-------IRDEMLEQGCVLD 327
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
+ +I GL K+K L D L ++++ D +T+I +C AL
Sbjct: 328 VIAYNTILNGLC----KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F + ++ + AY LI K+ K +E+ + M
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI------------------ 425
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+R+ P TY LI Y S G +A +++ M KGI P+L T
Sbjct: 426 --SRKIFPNH-------------ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVT 470
Query: 466 FNVLLAGLEKLGRVSDAEIY--RKEKKSIQADALSKDAV 502
N ++ G + G S A+ + R K + D +S + +
Sbjct: 471 CNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 509
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 156/355 (43%), Gaps = 23/355 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D ++++++ +F + + F M++ G+ D V YT +MH G++
Sbjct: 252 QGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE 311
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I +EM + C +++Y + L + +A ++ EM++RG P+ YT+T L+
Sbjct: 312 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 371
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G +AL +F M + ++PD A N LI+ CK GE + M ++
Sbjct: 372 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 431
Query: 240 RYPVFKEALQTF-KVADENDSL-LWQVHPQ--FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + + + V +++ LW V + P ++ N ++ + + D+
Sbjct: 432 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKA-DEF 490
Query: 296 LVLILLK--KKNLVAIDSLLSGI-----MDKSI-----QLDSAVISTIIEVN------CD 337
L ++ K + ++ ++L++G MDK+ ++ II N C
Sbjct: 491 LGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
R A L ++ +N +R+ Y ALI + + + +EM + G +
Sbjct: 551 QGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFA 605
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 139/339 (41%), Gaps = 24/339 (7%)
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
D V+ A +V++E+++ G+ N YT +++ L + GK+++ S+M+ G+ D
Sbjct: 97 DWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTY 156
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVH 265
N LI C+ G I+ M + L + + + A L+ ++
Sbjct: 157 NTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN 216
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
SP D + T +E ++ N + ++ + + D
Sbjct: 217 IGLSP------DTTTYNTLLVES------------CRRDNFSEAKEIFGEMLRQGVVPDL 258
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
S++I V +R D AL+ F K L + Y L+ + + +I +E
Sbjct: 259 VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDE 318
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALIGVYFSAGS 443
M + G L V +++ L + A K+F + E T+T LI + G+
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN 378
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
KAL ++ TM ++ I P + +N L+ G K+G + A
Sbjct: 379 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D YT ++ H M KA F +++ R D Y T++D F + + +
Sbjct: 362 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQ-RNIKPDIVAYNTLIDGFCKVGEMEKASEL 420
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
++ M + I + +TY +++ + G V A +W+ M K PT+V+ +K
Sbjct: 421 WDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 480
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ +A + MI +G+ P+ +Y L+ VR ++A +KM++ G+ PD
Sbjct: 481 SGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIIT 540
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ- 267
N+++ C+ G + L+LR M E + + AL V +N + ++ H +
Sbjct: 541 YNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYT-ALINGHVTQDNLNEAFRFHDEM 599
Query: 268 ----FSPE 271
F+P+
Sbjct: 600 LQRGFAPD 607
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 4/198 (2%)
Query: 290 LSIDQGLVLILLKKKNL--VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
LS Q L+L ++++ + V + L M + ++ V +I R+ A
Sbjct: 11 LSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEA 70
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F + A +L+G L+K++ E+ E+ ++G L VY ++++ L
Sbjct: 71 FRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCK 130
Query: 408 ARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+ S + + TY LIG Y G ++A +I +M KG+ PSL T
Sbjct: 131 DGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFT 190
Query: 466 FNVLLAGLEKLGRVSDAE 483
+N ++ GL K GR + A+
Sbjct: 191 YNAIINGLCKKGRYARAK 208
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y T+L G+ K+ S + ++E M++ G + D +Y ++ AG V+ AV I+
Sbjct: 500 DTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIF 559
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EE++ C P I+S+ + + L N + EA +KEM + GL P+ TY+ L+E +
Sbjct: 560 EELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT 619
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
K E A +F +M G P+ NIL++ ++G T + + +K+ L ++ Y
Sbjct: 620 DKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 679
Query: 242 PVFKE----ALQTFKVADENDSLLWQVHP 266
V + + Q +V +N W V P
Sbjct: 680 AVLERLQSGSHQKVRVRRKNPITGWVVSP 708
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 104/198 (52%), Gaps = 5/198 (2%)
Query: 20 AQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR--GFNHDRFTYTTMLD 74
A DLL + I D+ N VL ++K + + + G + D F+Y ++
Sbjct: 485 ALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILIS 544
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
FG A R+ +FE ++ D +++ S+++ L GD+D A ++EM+ + P
Sbjct: 545 SFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSP 604
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+V+Y+ ++ D+V+ A ++ EM+ G PN TY +L++ L R+G+ EA++++
Sbjct: 605 DVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLY 664
Query: 195 SKMQEAGVQPDKAACNIL 212
+K+++ G+ PD +L
Sbjct: 665 AKLKQQGLTPDSITYAVL 682
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 202/479 (42%), Gaps = 33/479 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFN-WVS-RSRGFNHDRFTYTTMLDIFGEA 79
DL+K ++ + YT +L+ H + F +V R RG+ D F Y +LD +
Sbjct: 214 DLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKD 273
Query: 80 KRIS-----SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+++ + EL+ + +D SV +VD ++++MK K C P
Sbjct: 274 NKLTWNLLLVCLQIAELLDCLTVALDNDKIISV--------EVDQVYMVFKDMKRKHCEP 325
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+YT +++ + E+ +++EM ++G PN Y +++ L ++ + +F
Sbjct: 326 DEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLF 385
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
SKM E +P+ ++++ G+ + ++ + Y L A
Sbjct: 386 SKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHA 445
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
E LL H Q+ F + D +++ +E D G K A+D LLS
Sbjct: 446 SEAHRLL---HLQYDWSFHDEGDRDAYMSM-LES--LCDAG--------KTTEALD-LLS 490
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
I +K I D+ + +T++ ++ +E + + + +Y LI +
Sbjct: 491 KIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAG 550
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYT 432
+ +I EE+ + + LI+ LG A F + E+ TY+
Sbjct: 551 RVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYS 610
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKK 490
LI + + A +++ M +G P++ T+N+LL LE+ GR ++A ++Y K K+
Sbjct: 611 TLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQ 669
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 173/415 (41%), Gaps = 19/415 (4%)
Query: 74 DIFGEAKRISSMKYVFEL---MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
++F R+ K V L M+ GI+ D ++ T +++ VD ++ ++
Sbjct: 96 ELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKL 155
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
P +++++ + + ++ A +++ M+ RG PN ++Y+++++ L R GK E
Sbjct: 156 GLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEV 215
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+++ M+ G +PD N ++++ CK + I MK + + +
Sbjct: 216 IKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHG 275
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
+ W+ E N + V + L+ I+ K+ +
Sbjct: 276 LRNLGR-----WKEAFGLLNEMKGGNIMPDLVAFSV---------LIDIMCKEGEVSEAR 321
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+L + + ++ D A +T++ C A FE + + ++ L+
Sbjct: 322 VILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGY 381
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCT 428
K + ++ +EMT G LI L ARRP+ A ++F + +
Sbjct: 382 CKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNL 441
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TY+ L+ G D+A+ +++ M G+ P L T+N+++ G+ K G+ DA
Sbjct: 442 VTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAR 496
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 87/161 (54%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY T+++ + + + VFE+M KG D +++ +++ A +D A
Sbjct: 331 GVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEA 390
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++EM + P VSY + L R EA +++K+M G PPN TY++L++
Sbjct: 391 KQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDC 450
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L + G ++A+ +F M+ +G++PD NI+I+ CK G+
Sbjct: 451 LSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 90/162 (55%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G D F+++ +++ + +AKRI K +F+ M +G+ D V+Y +++ L A
Sbjct: 364 SKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPL 423
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++++M P +V+Y+ + L + +A +++ M GL P+ TY +++
Sbjct: 424 EAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMI 483
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ + + GK+++A E+F+++ G+QP+ C I+ CK G
Sbjct: 484 DGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGG 525
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 87/174 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + T++T+++ F +I +F++M +G + +Y+ ++ L G
Sbjct: 156 GLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEV 215
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + E MK+ C P +V Y + L + V EA ++ +M G+ P TYT L+
Sbjct: 216 IKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHG 275
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L G+++EA + ++M+ + PD A ++LI+ CK GE +IL+ M E
Sbjct: 276 LRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTE 329
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D Y T++D + + ++ ++F M+ GI VTYTS++H L N G A
Sbjct: 226 GCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEA 285
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EMK P +V+++ + I+ V EA + K M + G+ P+ TY LM
Sbjct: 286 FGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNG 345
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ EA ++F M G PD + +IL+ CKA
Sbjct: 346 YCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKA 384
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG+ + +Y+ ++ + + + + E M+ G D V Y +++ L V+
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV+I+ +MK PT+V+YT+ + L R KEA + EM + P+ ++VL+
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ + + G+ EA I M E GV+PD A N L+ C
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYC 347
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +Y T++ +A+R + +F+ M G + VTY+ ++ LS G +D
Sbjct: 400 RGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQ 459
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ M+ P +V+Y + + + K+A +++ E+ +GL PN + T ++
Sbjct: 460 AMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTID 519
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+ + G +EA + F +M++ P + N
Sbjct: 520 GVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 151/389 (38%), Gaps = 38/389 (9%)
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+++ A++ + M P+IV + L K + K+M G+ + + T
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET-RTI----ILILR 230
+L+ R + + K+ + G++P+ + LI C G+ R I +++ R
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGP 289
K N Y + + L E LL + P+ + N V+ + D
Sbjct: 191 GYKPN--VHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKD---- 244
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL--A 347
+ V I K K +GI+ + S + H R+ A
Sbjct: 245 -RLVNEAVHIFCKMKG--------TGILPTVVTYTSLI----------HGLRNLGRWKEA 285
Query: 348 FEYSVKM---DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F +M ++ + A+ LI I+ K + I++ MT+ G V L++
Sbjct: 286 FGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNG 345
Query: 405 LGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
V A K+F ++ + +++ L+ Y A D+A +++ M +G+ P
Sbjct: 346 YCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPD 405
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
++N L++GL + R +AE K+ S
Sbjct: 406 TVSYNTLISGLCQARRPLEAEELFKDMHS 434
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 173/428 (40%), Gaps = 24/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + YT+ + + A ++ VF LM +G A TYT+++H L AG V A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ M+ C P Y + L R +EA + +E + G PN Y L++
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
AG+ E AL++F M P+ LI CK+G+ +++ M E L
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ +Q N+ H Q + + + V D + ID L
Sbjct: 282 VVTYTALIQ----GQCNEG-----HLQCAFRLLHLMETNGLVPNDWTFSVLIDA-----L 327
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K++ + L ++ K ++++ V +++I+ C + D A + + +
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+Y +LI L + + ++E+M + G ++I L KIF
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 421 L------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ P+ TYT + Y G + A + M +G+ P+L T+N L+ G
Sbjct: 448 MIATGINPD----IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 475 KLGRVSDA 482
LG VS A
Sbjct: 504 NLGLVSQA 511
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 171/422 (40%), Gaps = 24/422 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT+++ + A I + K + G+ D+ YTS + AG + A ++ M
Sbjct: 74 TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L+ C T +YTA + L V+EA V+ M P+ + Y ++ L AG+
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EEA + + G +P+ N LI+ C AGE + + M NR + + E
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253
Query: 248 LQTFKVAD--ENDSLLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + E +L+ V P ++ T I+G ++G + +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVT-------YTALIQG--QCNEGHLQCAFRL 304
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+L+ + L+ + S +I+ C + + A L VK + + Y
Sbjct: 305 LHLMETNGLVP---------NDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+LI L K E++++M G + + LI L ++ A + + E
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415
Query: 424 D--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
Q TYT +I ++ KI+ M GI+P + T+ V + + GR+ D
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMED 475
Query: 482 AE 483
AE
Sbjct: 476 AE 477
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 176/429 (41%), Gaps = 31/429 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + +T++ ++D + +++ + + +KG+ ++ V YTS++ L G +D
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + ++M + P SY++ + L ++ +AT + ++M+++G+ + TYT+++
Sbjct: 370 AADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG-----ETRTIILILRYMK 233
+ LVR E +IF KM G+ PD + + C+ G E+ + ++ R +
Sbjct: 430 DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF 489
Query: 234 EN--------RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
N R + +A TF+V V + P S + V
Sbjct: 490 PNLVTYNTLIRGYANLGLVSQAFSTFEV---------MVGKGWKPNEDSYTVLLRLVVKK 540
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
S+D + K ++ + LL I ++ + L + + S I C R + A
Sbjct: 541 SSSDNSVD------IWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAK 594
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F +L Y ++I +L +++ MTK+G+ + ++I L
Sbjct: 595 HFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSL 654
Query: 406 GSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A ++F LL E + LI GS + + M G PS
Sbjct: 655 CEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS- 713
Query: 464 GTFNVLLAG 472
T N ++ G
Sbjct: 714 NTINAMITG 722
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF + Y ++D + A + VFE M + + TYT ++H L +G V+
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++ M P +V+YTA ++ ++ A + M GL PN +T++VL+
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ L + K EEA + + GV+ ++ LI+ CK G+
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 138/287 (48%), Gaps = 20/287 (6%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKWD--SYT--VNQVLKTHPPMEKAWLFFNWVSRSRG 61
S + + K D A+ L +P+ D SYT +N + K+ ++ A + +S +RG
Sbjct: 187 SFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKS-GDLDSASRMLDHMS-NRG 244
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D TY++++D F + + + + M + G + V Y S++ L G + A
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 304
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT-------- 173
++ EM+ + P +VSY A + L +RVK+A V+ M++RG PN +
Sbjct: 305 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDI 364
Query: 174 --YTVLMEYLVRAGKYEEALEIFSK-MQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
YTVL++ L + G+++EA +FSK + E +PD N++++ CK + + I +
Sbjct: 365 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 424
Query: 231 YMKENRLA--LRYPVFKEALQT-FKVADENDSLLWQVHPQFSPEFIS 274
M E + + + L +++D LL V F P+F++
Sbjct: 425 QMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 471
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 165/459 (35%), Gaps = 102/459 (22%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVT----------------- 103
G+ H+ FTY +L R VF+ M +K DA T
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 104 ------------------YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
Y +++ S A D A EM C PT+V+YT +
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L +R ++A + EM +G PN YTY V++E L K +EA ++ +M G PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
N I+ CK R + + R PV
Sbjct: 182 VVTYNSFIKGLCKCD---------RVDEARKFLARMPV---------------------- 210
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
+P+ +S TT I G L K +L + +L + ++ D
Sbjct: 211 ---TPDVVS-------YTTVING-----------LCKSGDLDSASRMLDHMSNRGCTPDV 249
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
S++I+ C + A+ + +K+ AY +L+G L +L K +++ E
Sbjct: 250 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT-------------YT 432
M + G + V I L A R A +F + E + CT YT
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE-RGCTPNASSYSMLIVDILLYT 368
Query: 433 ALIGVYFSAGSADKALKIY-KTMCRKGIHPSLGTFNVLL 470
L+ G D+A ++ K + K P + +NV+L
Sbjct: 369 VLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVML 407
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 156/370 (42%), Gaps = 28/370 (7%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
D A+ +L+ + ++ D T N +K ++ +++R D +YTT+++
Sbjct: 164 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM-PVTPDVVSYTTVIN 222
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
++ + S + + M +G D VTY+S++ G+V+ A+ + + M C P
Sbjct: 223 GLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP 282
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+V+Y + + L + +A D+ EM +RG P+ +Y ++ L +A + ++A +F
Sbjct: 283 NMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVF 342
Query: 195 SKMQEAGVQPDKAACNILI----------EKCCKAGETRTIILILRYMKENRLALRYPVF 244
+M E G P+ ++ ++LI + CK G + + + ++ F
Sbjct: 343 DRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFF 402
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ Q+H Q + + + VT +I LV L
Sbjct: 403 YNVMLDSHCKRRQIDKALQIHKQ-----MLEKNCCNVVTWNI---------LVHGLCVDD 448
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
L +++L ++D+ D T+++ C + AL FE +VK + Y
Sbjct: 449 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 508
Query: 365 ALIGILIKLN 374
ALI L+ N
Sbjct: 509 ALITGLVHEN 518
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
++A F+ V + D F Y MLD + ++I + + M EK + VT+
Sbjct: 381 DEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNI 439
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++H L + A + M + P V+Y + + + A ++++E ++ G
Sbjct: 440 LVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 499
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
P+ TY+ L+ LV EEA +F+K+ E PD +L K
Sbjct: 500 CVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRK 548
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 51/101 (50%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R+S + + M ++G D VTY +++ + G A+ ++EE C P +V+Y+
Sbjct: 449 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 508
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
A + L + +EA ++ ++++R P+ T +L L
Sbjct: 509 ALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKL 549
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 4/193 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+L L ++ ++ ++DKS Q D+ + ++ C + + A +M
Sbjct: 13 LLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMG 72
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y ALI K F + + + EM K V ++ L A R A
Sbjct: 73 CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAV 132
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+ + D+ C+ TY ++ D+A K+ + M +G P + T+N + G
Sbjct: 133 KLLDEM-RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKG 191
Query: 473 LEKLGRVSDAEIY 485
L K RV +A +
Sbjct: 192 LCKCDRVDEARKF 204
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 198/481 (41%), Gaps = 78/481 (16%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEK--- 95
LK P + AW FF + S GF H+ TY ++ + + ++ + E++ K
Sbjct: 73 LKNEPNL--AWSFFTQLKES-GFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESV 129
Query: 96 -GINIDAV-------------TYTSVMHWLSN--------AGDVDGAVNIWEEMKLKECY 133
G +I A+ ++SV+ + + G D A++ + K +
Sbjct: 130 LGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFV 189
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P I+S M L + ++ A +Y+ + + GL PN YTY + ++ L R G +EEA+++
Sbjct: 190 PHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDV 249
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-- 251
F +M+EAGV P+ C+ IE C + LR ++ + + ++ F
Sbjct: 250 FREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCS 309
Query: 252 --KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
K+ + D + V+ +P+ I L+ K NL+
Sbjct: 310 EMKLKEAEDVFIDMVNEGIAPDGY------------------IYGALIHAYCKAGNLL-- 349
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVN-CDHRR--RDGALLAFEYSVKMDLNLERTAYLAL 366
+++ L + ++S I+ N D + RD + L+ Y +
Sbjct: 350 ---------QAVALHNDMVSNGIKTNLVDQFKEFRDSGIF-----------LDEVLYNIV 389
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED-- 424
+ L KL + E++ EM SL V LI + V A +F + E
Sbjct: 390 VDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGI 449
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ TY L+G + G +AL++ + +G+ P+ T N ++ GL G+V +AE
Sbjct: 450 EPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEA 509
Query: 485 Y 485
+
Sbjct: 510 F 510
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 199/485 (41%), Gaps = 64/485 (13%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
++ +N++++ H ++ A + + R G N + +TY + VF M
Sbjct: 196 NFLMNRLIE-HGKIDMAVAIYRHLKRL-GLNPNDYTYGIFIKALCRKGNFEEAVDVFREM 253
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+E G+N +AVT ++ + L + D ++ +YTA ++ ++
Sbjct: 254 EEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKL 313
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI----------------FSK 196
KEA DV+ +M+ G+ P+ Y Y L+ +AG +A+ + F +
Sbjct: 314 KEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKE 373
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----K 252
+++G+ D+ NI+++ CK G+ + +L MK R++L + + + K
Sbjct: 374 FRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGK 433
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
+ D + P+ ++ N V G S + LKK+ L L
Sbjct: 434 LVDAKNMFEEMKERGIEPDIVTYNILV--------GGFSRNG------LKKEAL----EL 475
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
L I + ++ +SA + IIE C + A AF +++ D LE Y A++ K
Sbjct: 476 LDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA-EAFLNTLE-DKCLEN--YSAMVDGYCK 531
Query: 373 LNTFPKVAEIVEEMTKAG-------------HSLGVYLGALLIHRLGSARRPVPAAKIFS 419
N K E+ ++K G G +GA R G +R A +F
Sbjct: 532 ANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFC--RDGDMKR---AQLVFD 586
Query: 420 LLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+L E TYT +I Y +A I+ M +GI P + T+ V+L G K
Sbjct: 587 MLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTN 646
Query: 478 RVSDA 482
+ DA
Sbjct: 647 NLQDA 651
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 62/114 (54%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
++ Y ++ F + + VF+++ E+GI D +TYT +++ + A +I+
Sbjct: 561 NQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIF 620
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+MK + P +++YT + + +++A ++Y EMI RGL P+ TYT L+
Sbjct: 621 NDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A L F+ + RG D TYT M++ + + + +F M+E+GI D +TYT
Sbjct: 578 MKRAQLVFDMLV-ERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 636
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
V+ S ++ A+N+++EM + P IV+YTA +
Sbjct: 637 VVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGI--------NIDAVTYTSVMHWLSNAGDVDG 119
Y+ M+D + +A +F + ++GI + + Y ++ GD+
Sbjct: 521 NYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKR 580
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ + + P +++YT + + ++EA D++ +M +RG+ P+ TYTV+++
Sbjct: 581 AQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLD 640
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ ++A+ ++ +M G+QPD L+ C G
Sbjct: 641 GHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFG 681
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y T+L G+ K+ S + ++E M++ G + D +Y ++ AG V+ AV I+
Sbjct: 283 DTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIF 342
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EE++ C P I+S+ + + L N + EA +KEM + GL P+ TY+ L+E +
Sbjct: 343 EELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT 402
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
K E A +F +M G P+ NIL++ ++G T + + +K+ L ++ Y
Sbjct: 403 DKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 462
Query: 242 PVFKE----ALQTFKVADENDSLLWQVHP 266
V + + Q +V +N W V P
Sbjct: 463 AVLERLQSGSHQKVRVRRKNPITGWVVSP 491
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 88/155 (56%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G + D F+Y ++ FG A R+ +FE ++ D +++ S+++ L GD+
Sbjct: 311 KQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDI 370
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++EM+ + P +V+Y+ ++ D+V+ A ++ EM+ G PN TY +L
Sbjct: 371 DEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNIL 430
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++ L R+G+ EA+++++K+++ G+ PD +L
Sbjct: 431 LDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 465
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 194/474 (40%), Gaps = 64/474 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T ++ IFG + ++ F+L+++ + ++ TY ++ + + + A ++ E+
Sbjct: 12 TINILIGIFGGG---ADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVEL 68
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ + I +Y + L +++V + V+K+M ++ P+ YTYT+++ + GK
Sbjct: 69 RRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKA 128
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+E+L +F +M E G P+ A N +I+ I + M EN F
Sbjct: 129 DESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVI 188
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
L VA+ L +V + S +F++ SI LV L K +
Sbjct: 189 LNVL-VAEGQLGRLDEV-VEVSNKFMNK---------------SIYAYLVRTLSKLGHAS 231
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
L + + D +++E CD + AL + ++ + Y ++
Sbjct: 232 EAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVL 291
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L KL + ++ E+M + G S ++ +LI G A R A KIF L E+ C
Sbjct: 292 SALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEEL-ENSSC 350
Query: 428 --------------------------------------TATYTALIGVYFSAGSADKALK 449
TY+ LI + + A +
Sbjct: 351 KPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACR 410
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAV 502
++ M +G P++ T+N+LL LE+ GR ++A ++Y K K+ L+ D++
Sbjct: 411 LFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQ----QGLTPDSI 460
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 38/293 (12%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFN-WVS-RSRGFNHDRFTYTTMLDIFGEA 79
DL+K ++ + YT +L+ H + F +V R RG+ D F Y +LD +
Sbjct: 31 DLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKD 90
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
++ + VF+ M+ K D TYT ++ G D ++ +++EM K P +++Y
Sbjct: 91 NKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAY 150
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME-------------------- 179
++ L N V + ++ +M++ PN +T++V++
Sbjct: 151 NTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNK 210
Query: 180 --------YLVRA----GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
YLVR G EA +F M + D+ A ++E C AG+T +
Sbjct: 211 FMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALD 270
Query: 228 ILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDN 276
+L + E R++ ++ L K +D +D SP+ S N
Sbjct: 271 LLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYN 323
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 202/522 (38%), Gaps = 67/522 (12%)
Query: 9 YKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH---- 64
+ + K W A D+++ K D+ VL TH M + ++ + F H
Sbjct: 252 HALCKEGRWADALDMIEREDFKLDT-----VLCTH--MISGLMEASYFDEAMSFLHRMRC 304
Query: 65 -----DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD--- 116
+ TY T+L F + K++ K + +M +G N + + S++H N D
Sbjct: 305 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 364
Query: 117 --------------------------------------VDGAVNIWEEMKLKECYPTIVS 138
+D A I+ EM C V+
Sbjct: 365 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 424
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ + L + +A + KEM+++G P+ TY+ ++ +L A K E+A +F +M+
Sbjct: 425 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 484
Query: 199 EAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEA-LQTFKVA 254
GV PD ILI+ CKAG + + + +R + + + Y A L+ +V
Sbjct: 485 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 544
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
ND V P ++ V+ + G +S + L+ + D
Sbjct: 545 QANDIFHRMVDAGCRPNDVTYGALVDGLCK--AGNISKAFEVYAKLIGTSDSADSDFYFP 602
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++ + +++ C + D A + + Y ALI K
Sbjct: 603 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 662
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATY 431
E+ +MTK G+ V+ LI R+ R A K+ S + +D CT TY
Sbjct: 663 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS-CTPNVVTY 721
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
TA+I G ++KALK+ M KG P++ T+ L+ GL
Sbjct: 722 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/506 (19%), Positives = 177/506 (34%), Gaps = 48/506 (9%)
Query: 8 VYKILKYSTWDSAQDLLKNL------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
V + + W+ A + L L P K + QVL + ++ + +S S G
Sbjct: 181 VRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSES-G 239
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F DRFT + R + ++++ + +D V T ++ L A D A+
Sbjct: 240 FCMDRFTVGCFAHALCKEGRWAD---ALDMIEREDFKLDTVLCTHMISGLMEASYFDEAM 296
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ M+ C P +V+Y + ++ + M+ G PN + L+
Sbjct: 297 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY 356
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE--TRTIILILRYMKENRLAL 239
Y A ++ ++M G P NI I C + + ++ + + LA
Sbjct: 357 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAA 416
Query: 240 RYPVFKEALQTFKVA----DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ K + F + D + F+ D V T + +++
Sbjct: 417 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 476
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+L K V D + +I +DS + +IE A FE +
Sbjct: 477 FLLFQEMKMVGVTPD-----VYTYTILIDSFCKAGLIE---------QAQWLFEEMRSVG 522
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y ALI +K P+ +I M AG L+ L A A
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582
Query: 416 KIFSLL--------------PEDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCRK 457
++++ L ED+ A TY AL+ A D A ++ M
Sbjct: 583 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 642
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAE 483
G P+ ++ L+ G K G++ A+
Sbjct: 643 GCEPNHIVYDALIDGFCKAGKIDSAQ 668
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 146/442 (33%), Gaps = 73/442 (16%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ + TY ++ + A ++ V + M E G +D T H L G A
Sbjct: 204 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 263
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ E K V T + L EA M PN TY L+
Sbjct: 264 LDMIEREDFK---LDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 320
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
++ + I + M G P+ + N L+ C + +L M
Sbjct: 321 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 380
Query: 241 YPVFKEALQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y V+ + + ++ S L + + E ++ N
Sbjct: 381 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAAN----------------------C 418
Query: 300 LLKKKNLVAIDSLLSGI--MDKSIQL-----------DSAVISTIIEVNCDHRRRDGALL 346
+L K N+ L G+ DK+ QL D++ S +I C + + A L
Sbjct: 419 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 478
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
F+ + + + Y LI K + + EEM G S V
Sbjct: 479 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV----------- 527
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
TYTALI Y A +A I+ M G P+ T+
Sbjct: 528 ----------------------VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 565
Query: 467 NVLLAGLEKLGRVSDA-EIYRK 487
L+ GL K G +S A E+Y K
Sbjct: 566 GALVDGLCKAGNISKAFEVYAK 587
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 186/457 (40%), Gaps = 60/457 (13%)
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
D G+A+R+ L + +G D+V +V+ + +A ++ +W E ++ +
Sbjct: 87 DFDGKAERV--------LRRCRGFLTDSVV-VAVLGAVRDAPELCARFFLWAERQVGYSH 137
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
T Y A L + R ++A + +E+ + VL+ R G + EALE
Sbjct: 138 -TGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEE 196
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL-RYPV--FKEAL-Q 249
++++ G +P K N L++ AG+ + + M E+ + R+ V F AL +
Sbjct: 197 LGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCK 256
Query: 250 TFKVADENDSLL---WQVHPQFSPEFISD-------NDAVEFV-----TTDIEGPLSIDQ 294
+ AD D + +++ IS ++A+ F+ + I ++ +
Sbjct: 257 EGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY-R 315
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ LKKK L +++ +M + + ++ ++++ C+ + + Y+ K+
Sbjct: 316 TLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD-------YAYAYKL 368
Query: 355 DLNLERTA--------YLALIGILIKLNTFPK------VAEIVEEMTKAGHSLGVYLGAL 400
LN T Y IG + P +I EM A L A
Sbjct: 369 -LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 427
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALKIYKTMC 455
L + K F L+ E + T+TY+ +I A +KA +++ M
Sbjct: 428 FARCLCGVGK---FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 484
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
G+ P + T+ +L+ K G + A+ +E +S+
Sbjct: 485 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 521
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 11/219 (5%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQ-------VLKTHPPMEKAWLFFNWVSRSRGFN 63
+ K + ++A DLL+ L ++ TV+ LK PM L RG
Sbjct: 181 LCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVL---KEMVQRGIE 237
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
TY TML + + +I + M+++ ID V+YT+V+H AG+V A +
Sbjct: 238 PTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRV 297
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL-PPNCYTYTVLMEYLV 182
++EM + P + +Y A +++ D V+ A V++EM++ G+ PN T+ V++ L
Sbjct: 298 FDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLC 357
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
G E AL +M E G++ N++I C AGE
Sbjct: 358 HVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGE 396
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
Query: 35 TVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N +LK + +++AW F+ + + R D +YTT++ FGEA + K VF+
Sbjct: 242 TYNTMLKGYFRSNQIKEAWEFYLEMKK-RKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDE 300
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE--CYPTIVSYTAYMKILFLN 149
M ++G+ + TY +++ V AV ++EEM ++E C P +V++ ++ L
Sbjct: 301 MVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEM-VREGVCSPNVVTFNVVIRGLCHV 359
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
++ A + M + GL + TY V++ Y AG+ E+ LE+F KM + P+
Sbjct: 360 GDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTY 419
Query: 210 NILI 213
N+LI
Sbjct: 420 NVLI 423
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 8/193 (4%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D +Y + + + KR V + M ++GI VTY +++ + + A
Sbjct: 201 FRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAW 260
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EMK ++C +VSYT + VK+A V+ EM++ G+ PN TY L++
Sbjct: 261 EFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVF 320
Query: 182 VRAGKYEEALEIFSKMQEAGV-QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ + A+ +F +M GV P+ N++I C G+ + + M E+ L
Sbjct: 321 CKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGL--- 377
Query: 241 YPVFKEALQTFKV 253
+ ++QT+ V
Sbjct: 378 ----RASVQTYNV 386
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 40/261 (15%)
Query: 29 IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRS-RGFNHDRFTYTTMLDIFGEAKRISS 84
I W VN+ LK H P KA LFF + R + H ++ +DI + +S
Sbjct: 62 IHWTPELVNKTLKRLWNHGP--KALLFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNS 119
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+ M+ + T + ++ G AV + M + + S+ +
Sbjct: 120 AWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLD 179
Query: 145 ILFLNDRVKEATD----------------------------------VYKEMIQRGLPPN 170
IL ++RV+ A D V KEM+QRG+ P
Sbjct: 180 ILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPT 239
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
TY +++ R+ + +EA E + +M++ + D + +I +AGE + +
Sbjct: 240 MVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFD 299
Query: 231 YMKENRLALRYPVFKEALQTF 251
M + +A + +Q F
Sbjct: 300 EMVKEGVAPNVATYNALIQVF 320
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
E M E G+ TY V+ + +AG+++ + ++ +M C P + +Y + +F+
Sbjct: 370 ERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVR 429
Query: 150 DRVKE---ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ ++ A + EM++RG P +T+ ++ LV G + A +I G
Sbjct: 430 KKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGNQDFAKDILRMQSRCG 484
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 3/189 (1%)
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+L +L K N V L + + D+ + + C +R AL + V+ +
Sbjct: 177 LLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGI 236
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y ++ + N + E EM K + V +IH G A A +
Sbjct: 237 EPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKR 296
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI-HPSLGTFNVLLAGL 473
+F + ++ ATY ALI V+ S A+ +++ M R+G+ P++ TFNV++ GL
Sbjct: 297 VFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGL 356
Query: 474 EKLGRVSDA 482
+G + A
Sbjct: 357 CHVGDMERA 365
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T N +L E+A LFF + R G D +Y +++D++ + + + V E M+E
Sbjct: 212 TFNILLSGWKQSEEAELFFEEM-RELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMRE 270
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+ I+ D +TYTS++ L G D A +I EMK CYP + +Y A ++ + R+ +
Sbjct: 271 EDISPDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGD 330
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
A+++ EM +GL PN TY + + + ++ +M E+G P+ +C LI
Sbjct: 331 ASNLMDEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLI 389
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 14/246 (5%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLK----THPPMEKAWLFF 53
+ D + VY+I+ S+ S Q+L ++L I + +++VLK +H +A FF
Sbjct: 35 LNDDVEVVYRIITSSS--SVQNLKQSLTSTGIFLSNDLIDKVLKRVRFSHGNPLQALEFF 92
Query: 54 NWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLS 112
+ +GF H ++ T+L I G +++ + V M+ K I T V+ ++
Sbjct: 93 YYTDNRKGFYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVA 152
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
V V + + K + A ++ L + +A +VY + ++ PN
Sbjct: 153 KLCSVRQTVESFRKFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYHRL-KKEFKPNLQ 211
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T+ +L+ ++ EEA F +M+E G++PD + N LI+ CK E ++ M
Sbjct: 212 TFNILLSGWKQS---EEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKM 268
Query: 233 KENRLA 238
+E ++
Sbjct: 269 REEDIS 274
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT---SVMHWLSNAGDVDGAVNIWE 125
Y ++ + AKR+ + + M KG++ +A TY V +W + D+ + +++
Sbjct: 315 YNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFRVFYW---SNDLRNSWSLYR 371
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
M C P S +++ +++V+ A ++ +M+++G VL + L G
Sbjct: 372 RMMESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMG 431
Query: 186 KYEEALEIFSKMQEAGVQPDKAA 208
K EA + F +M E G +P +
Sbjct: 432 KLVEAEKCFLQMIEKGHKPSNVS 454
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 167/418 (39%), Gaps = 16/418 (3%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+D + + + + +F M+E G++ D VTY S++ G ++ +++ E
Sbjct: 290 FTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNE 349
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P I++Y + +++ A + + EM GL PN TY+ L++ + G
Sbjct: 350 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 409
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A+++F M+ G+ P++ LI+ CKAG +L M + + L +
Sbjct: 410 MQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 469
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
L A +V + IS N V LV +K + +
Sbjct: 470 LLDGLCKAGRMIE-AEEVFRSMLKDGISPNQQVY-------------TALVHGYIKAERM 515
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+L + + +I+ D + +II +C R+ + L E ++ +
Sbjct: 516 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 575
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--D 424
I K +EM G + +LI L A A F +
Sbjct: 576 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGL 635
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Q A YT+LI + A K++ M +G+ P + F L+ G K G + +A
Sbjct: 636 QPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 693
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 193/448 (43%), Gaps = 34/448 (7%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHDRFTYTTMLDIFGEAKR 81
+K++ D T N ++ + EK F + S ++ G + TY+T++D F +
Sbjct: 350 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 409
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
+ +F M+ G+ + TYTS++ AG++ A + +M IV+YTA
Sbjct: 410 MQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 469
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ L R+ EA +V++ M++ G+ PN YT L+ ++A + E+A++I +M E
Sbjct: 470 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 529
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL--QTFKVADENDS 259
++PD +I C + LIL MK ++ PV + FK +D+
Sbjct: 530 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISAN-PVISTTIIDAYFKAGKSSDA 588
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIM 317
L F + V T + + ID L K +V A+D ++
Sbjct: 589 L----------NFFQEMQDVGVEATIVTYCVLIDG------LCKAGIVELAVDYFCR-ML 631
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+Q + AV +++I+ C + + A F+ + + TA+ ALI +K
Sbjct: 632 SLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQ 691
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCTATY 431
+ ++ MT+ +++ L+ A K F+ +LPE+ C
Sbjct: 692 EALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLC---- 747
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGI 459
L+ Y+ G D+A+++ M R G+
Sbjct: 748 ICLLREYYKRGQLDEAIELKNEMERMGL 775
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 181/460 (39%), Gaps = 36/460 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + D TY +++D +G+ + + +F M++ G D +TY +++ +
Sbjct: 316 REMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKM 375
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + EMK P +V+Y+ + ++ A ++ +M + GL PN +TYT L
Sbjct: 376 PRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSL 435
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +AG EA ++ + M +AGV+ + L++ CKAG + R M ++ +
Sbjct: 436 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 495
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV--EFVTTDIEGPLSIDQG 295
+ V+ VH E + D + + +I+ L +
Sbjct: 496 SPNQQVYTAL----------------VHGYIKAERMEDAMKILKQMTECNIKPDLILYGS 539
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
++ ++ L +L + + I + + +TII+ + AL F+ +
Sbjct: 540 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y LI L K + M G V + LI L A
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAK 659
Query: 416 KIFSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
K+F ++ +C +TALI G+ +AL + M I L + L
Sbjct: 660 KLF----DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 715
Query: 470 LAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKIC 509
++G + G + A + E + K +P EE +C
Sbjct: 716 VSGFSQCGELHQARKFFNE-------MIEKGILP-EEVLC 747
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 112/494 (22%), Positives = 202/494 (40%), Gaps = 54/494 (10%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGI- 97
L+ P + A FF W GF H +Y ++ + A+ + + V E++ +
Sbjct: 139 LREDPKL--ALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMD 196
Query: 98 ------NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL----KECYPTIVSYTAYMKIL- 146
NI + +++ +S +G D +++ E+ L EC+ + ++ K
Sbjct: 197 MGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARS 256
Query: 147 --FLNDRVKEATD------VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
FL R+ ++ + + +MI G+ P+ +TY V+++YL + G E + +F +M+
Sbjct: 257 CNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR 316
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE----------NRLALRYPVFKEAL 248
E G+ PD N LI+ K G + + MK+ N L Y F++
Sbjct: 317 EMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMP 376
Query: 249 QTFKVADE--NDSLLWQVHP------QFSPEFISDNDAVEFVTTDIEGPLSID---QGLV 297
+ F+ E N+ L V F E + FV G L + L+
Sbjct: 377 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLI 436
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K NL LL+ ++ ++L+ + +++ C R A F +K ++
Sbjct: 437 DANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 496
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ Y AL+ IK +I+++MT+ + L +I S R+
Sbjct: 497 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEET--- 553
Query: 418 FSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
L+ E+ K T +I YF AG + AL ++ M G+ ++ T+ VL+
Sbjct: 554 -KLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 612
Query: 472 GLEKLGRVSDAEIY 485
GL K G V A Y
Sbjct: 613 GLCKAGIVELAVDY 626
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + YT+++D + I S K +F+ MQ +G+ D +T+++ G++
Sbjct: 632 SLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQ 691
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVL 177
A+ + M + YT+ + + +A + EMI++G LP +L
Sbjct: 692 EALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLL 751
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
EY R G+ +EA+E+ ++M+ G+ + A
Sbjct: 752 REYYKR-GQLDEAIELKNEMERMGLITESAT 781
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 105/514 (20%), Positives = 217/514 (42%), Gaps = 42/514 (8%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSR 58
D + + + L+ + A LL LP D+ + N VL + + +A +SR
Sbjct: 46 DAAALLNRRLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSR 105
Query: 59 SR--GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
+ +YT ++ ++R + MQ G+ D VTY +++ L +A +
Sbjct: 106 EAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAE 165
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+DGA+ + EM +P ++ Y+ ++ + R ++ + V++EM + G+ P+ +T
Sbjct: 166 LDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTG 225
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
++ L + G+ +A+++ M + G++P+ N+LI CK G R + + M +
Sbjct: 226 FIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKG 285
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+A + + E D + + + + + D V F + I G I +
Sbjct: 286 VAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTF-NSVIHGLCKIGRMR 344
Query: 297 VLILLKKK--------NLVAIDSLLSGIM-----DKSIQLDSAVISTIIE---------V 334
I +++ NLV + L+ G + + ++ L S +IS+ +E +
Sbjct: 345 QAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILI 404
Query: 335 NCDHR--RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM------ 386
N + D A + + + E Y+ L+ L +L + + EM
Sbjct: 405 NGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL 464
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
+S +Y GA + +A++ + L P+ TY+ LI ++ G ++
Sbjct: 465 DAVAYSTMMY-GACKSGDIKAAKQLLQDMLDEGLAPD----AVTYSILINMFAKLGDLEE 519
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
A ++ K M G P + F+ L+ G G+++
Sbjct: 520 AERVLKQMAASGFVPDVAVFDSLIKGYSAEGQIN 553
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 7/209 (3%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
+Y + L+ H K + N +S S G D FTY+ +++ F + + +
Sbjct: 366 NYLIGGFLRVH----KVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLR 421
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M ++GI + Y ++ L G ++ A+ ++ EM + C V+Y+ M +
Sbjct: 422 TMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGACKSG 480
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+K A + ++M+ GL P+ TY++L+ + G EEA + +M +G PD A +
Sbjct: 481 DIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFD 540
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLAL 239
LI+ G+ I+ ++ M+ +A+
Sbjct: 541 SLIKGYSAEGQINKILDLIHEMRAKNVAI 569
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 156/395 (39%), Gaps = 57/395 (14%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+AV+YT VM L + D AV + M+ +V+Y ++ L + A ++
Sbjct: 114 NAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELL 173
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
EM G+ PN Y+ L+ R+G++++ ++F +M GV+PD I+ CK
Sbjct: 174 GEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKK 233
Query: 220 GETRTI-----ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFI 273
G I++ R ++ N + Y V L E +L ++ + +P+ +
Sbjct: 234 GRIGKAVKVKDIMVQRGLEPN--VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVV 291
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ N + + G L +D + L+ + ++ G D ++ D +++I
Sbjct: 292 TYNTLI----AGLSGVLEMDGAMGLL----------EEMIQG--DTLVEPDVVTFNSVIH 335
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C R A+ E + Y LIG ++++ ++ E+ +G
Sbjct: 336 GLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSG--- 392
Query: 394 GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
L P+ + TY+ LI + D+A +T
Sbjct: 393 --------------------------LEPD----SFTYSILINGFSKLWEVDRAEMFLRT 422
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
M ++GI L + LLA L +LG + A + E
Sbjct: 423 MTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNE 457
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 12 LKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHD 65
L+ + A +L+ L ++ DS+T + ++ + ++A +F +++ RG +
Sbjct: 373 LRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQ-RGIRAE 431
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN--IDAVTYTSVMHWLSNAGDVDGAVNI 123
F Y +L + + M+ L E +N +DAV Y+++M+ +GD+ A +
Sbjct: 432 LFHYIPLLAALCQ---LGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQL 488
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
++M + P V+Y+ + + ++EA V K+M G P+ + L++
Sbjct: 489 LQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSA 548
Query: 184 AGKYEEALEIFSKMQEAGVQPD 205
G+ + L++ +M+ V D
Sbjct: 549 EGQINKILDLIHEMRAKNVAID 570
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 98/236 (41%), Gaps = 16/236 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGD 116
RG + TY ++ F R+ + LM E G+ D+ TY+ +++ S +
Sbjct: 356 RGCMCNLVTYNYLIGGF---LRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM-IQRGLPPNCYTYT 175
VD A M + + Y + L +++A ++ EM + GL + Y+
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYS 470
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+M ++G + A ++ M + G+ PD +ILI K G+ +L+ M +
Sbjct: 471 TMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAAS 530
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE--FVTTDIEGP 289
VF ++ + + + +L +H E + N A++ F+ T + P
Sbjct: 531 GFVPDVAVFDSLIKGYSAEGQINKILDLIH-----EMRAKNVAIDPKFICTLVRLP 581
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 174/408 (42%), Gaps = 32/408 (7%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELM---QEKGINIDAVTYTSVMHWLSNAGDVD 118
F DR +Y T+++ G K I K +LM +E+ I D V Y ++ L V
Sbjct: 170 FQLDRISYGTLIN--GLCK-IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVG 226
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A N++ EM K+ YP +V+YT + + + EA + EM + + P+ YT+++L+
Sbjct: 227 EACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILI 286
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L + GK + A + + M +A V+PD N L++ E + + M ++ +
Sbjct: 287 DALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVT 346
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
Y + + L K+ DE SL ++ H P I+ N I+G
Sbjct: 347 PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSL-------IDG------ 393
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L K + + L+ + D+S D S++I+ C + D A+ F+ +
Sbjct: 394 -----LCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQ 448
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
++ + Y LI L K E+ + + G+ L + ++I A A
Sbjct: 449 EIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEA 508
Query: 415 AKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ S + ED C T+ +I F DKA K+ + M +G+
Sbjct: 509 LALLSKM-EDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 114/233 (48%), Gaps = 4/233 (1%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+K D T N ++ + ++ A FN +++S G +YT M+D + K +
Sbjct: 310 VKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQS-GVTPGVQSYTIMIDGLCKTKMVDEA 368
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+FE M+ K + + +T+ S++ L +G + ++ ++M+ + +++Y++ +
Sbjct: 369 ISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDA 428
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L N + +A ++K+MI + + P+ YTYT+L++ L + G+ + A E+F + G D
Sbjct: 429 LCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLD 488
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
++I CKAG + +L M++N F + DEND
Sbjct: 489 IRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDEND 541
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 35/199 (17%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS------------- 106
+ N D +T++ ++D G+ ++ + K V +M + + D VTY S
Sbjct: 273 KNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKH 332
Query: 107 ---VMHWLSNAGD-------------------VDGAVNIWEEMKLKECYPTIVSYTAYMK 144
V + ++ +G VD A++++EEMK K P +++ + +
Sbjct: 333 AKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLID 392
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L + R+ D+ +M R + TY+ L++ L + ++A+ +F KM +QP
Sbjct: 393 GLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQP 452
Query: 205 DKAACNILIEKCCKAGETR 223
D ILI+ CK G +
Sbjct: 453 DMYTYTILIDGLCKGGRLK 471
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/446 (19%), Positives = 181/446 (40%), Gaps = 37/446 (8%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
F + +L + +R + + + + KGI D VT +++ + G + + ++
Sbjct: 70 FQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLAT 129
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ + +P +++ T +K L L VK+A + +++ + +Y L+ L + G+
Sbjct: 130 ILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGE 189
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A+++ ++E ++PD NI+I+ CK + M ++ +
Sbjct: 190 TKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTT 249
Query: 247 ALQTF--------KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ F VA N+ L ++P ++ + D EG + + ++
Sbjct: 250 LIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILID-------ALGKEGKMKAAKIVL 302
Query: 298 LILLK---KKNLVAIDSLLSG------------IMDKSIQ--LDSAVISTIIEVN--CDH 338
+++K K ++V +SL+ G + + Q + V S I ++ C
Sbjct: 303 AVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKT 362
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
+ D A+ FE ++ + +LI L K V ++V++M V
Sbjct: 363 KMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITY 422
Query: 399 ALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
+ LI L A +F + E Q TYT LI G A ++++ +
Sbjct: 423 SSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLI 482
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
KG H + T+ V+++G K G +A
Sbjct: 483 KGYHLDIRTYTVMISGFCKAGLFDEA 508
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 72/389 (18%), Positives = 142/389 (36%), Gaps = 57/389 (14%)
Query: 101 AVTYTSVM-----HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
A T S M H+ +N D + AV ++ M L P + + L R A
Sbjct: 30 ACTRASAMLHSQSHY-NNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTA 88
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ K + +G+ + T +L+ G+ + + + + + G PD LI+
Sbjct: 89 ISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKG 148
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
C GE + + K D+ +L +Q+
Sbjct: 149 LCLRGEVK-------------------------KALKFHDDVVALEFQL----------- 172
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
D + + T I G I + I L+ + ++SI+ D + + II+
Sbjct: 173 -DRISYGTL-INGLCKIGETKAAI-----------QLMRNLEERSIKPDVVMYNIIIDSL 219
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C ++ A + + Y LI + + ++ EM + V
Sbjct: 220 CKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDV 279
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKT 453
Y ++LI LG + A + +++ + + TY +L+ YF A ++ +
Sbjct: 280 YTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNS 339
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M + G+ P + ++ +++ GL K V +A
Sbjct: 340 MAQSGVTPGVQSYTIMIDGLCKTKMVDEA 368
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 9/217 (4%)
Query: 20 AQDLLKNLP---IKWDSYTVNQVLKTHPPMEKA----WLFFNWVSRSRGFNHDRFTYTTM 72
A ++ + +P K D YT N ++ +++ WL + +S G + TY T+
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE--GVVANTVTYNTL 535
Query: 73 LDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
++ F I + + M +G +D +TY S++ L AG+VD A +++E+M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P+ +S + L + V+EA + KEM+ RG P+ T+ L+ L RAG+ E+ L
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+F K+Q G+ PD N L+ CK G L+L
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/467 (20%), Positives = 181/467 (38%), Gaps = 26/467 (5%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
D L+N K + + ++L+ + + F+W G+ H Y ++ G
Sbjct: 67 DSLRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGE 126
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK-LKECYPTIVSYT 140
++ + M+++GI + S+M AG + EM+ + C PT SY
Sbjct: 127 FKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYN 186
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
++IL + K A +V+ +M+ R +PP +T+ V+M+ + + AL + M +
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
G P+ LI K + +L M F + + D +
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL-LKKKNLVAIDSLLSGIMDK 319
V+ F D+ ++ + +D L + K +V ++L+ G +
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH 366
Query: 320 SIQLDS--AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+LD AV+S ++ Y + D+ Y +LI K
Sbjct: 367 G-RLDDAKAVLSDMVT---------------SYGIVPDV----CTYNSLIYGYWKEGLVG 406
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
E++ +M G VY +L+ + A + + + D + T + LI
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ +A++I++ M RKG P + TFN L++GL ++ + A
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 163/424 (38%), Gaps = 52/424 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF D TY +++ + R+ + K +F + + I V + +++H G +D
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLDD 371
Query: 120 AVNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +M P + +Y + + + V A +V +M +G PN Y+YT+L+
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + GK +EA + ++M G++P+ N LI CK + I R M
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
F + DE LW + + IS+ VT + L+
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLR-----DMISEGVVANTVTYNT---------LIN 537
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L++ + L++ ++ + LD +++I+ C D A FE ++
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ LI L + + E +EM G + +
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI----------------------- 634
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
T+ +LI AG + L +++ + +GI P TFN L++ L K G
Sbjct: 635 ----------VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 479 VSDA 482
V DA
Sbjct: 685 VYDA 688
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/492 (21%), Positives = 192/492 (39%), Gaps = 35/492 (7%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A +F++ +SR FT+ ++ F I S + M + G ++V Y +++
Sbjct: 202 ANVFYDMLSRK--IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
H LS V+ A+ + EEM L C P ++ + L DR+ EA + M+ RG
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ TY LM L + G+ + A ++F ++ +P+ N LI G +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 229 LRYMKENRL---------ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDN-- 276
L M + +L Y +KE L + +D P +S + D
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 277 ---------DAVEFVTTDIEGPLSID-QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ + ++ D P ++ L+ K+ + + + K + D
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+++I C+ AL + + Y LI ++ + ++V EM
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA--LIGVYFSAGSA 444
G L LI L A A +F + D + + LI +G
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAVP 503
++A++ K M +G P + TFN L+ GL + GR+ D ++RK +QA+ + D V
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK----LQAEGIPPDTVT 671
Query: 504 MEEKICDLLYGG 515
+ L GG
Sbjct: 672 FNTLMSWLCKGG 683
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A+ N +S + G + + ++ F + RI +F M KG D T+
Sbjct: 440 IDEAYNVLNEMS-ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L ++ A+ + +M + V+Y + +KEA + EM+ +
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G P + TY L++ L RAG+ ++A +F KM G P +CNILI C++G
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRF 67
+ K D+A+DL +P K + N ++ TH ++ A + + S G D
Sbjct: 332 LCKIGRVDAAKDLFYRIP-KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +++ + + + V M+ KG + +YT ++ G +D A N+ EM
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P V + + R+ EA ++++EM ++G P+ YT+ L+ L +
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ AL + M GV + N LI + GE +
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 145/372 (38%), Gaps = 64/372 (17%)
Query: 190 ALEIFS-KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
++E+FS + G + +LI K GE +TI +L MK+ + + +F +
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 249 QTFKVA---DENDSLLWQVHPQFS--PEFISDNDAVEFVTT------------DIEG--- 288
+ + A + L+ ++ +S P F S N +E + + D+
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213
Query: 289 -PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ---LDSAVISTIIEVNCDHRRRDGA 344
P G+V+ N IDS LS + D + +S + T+I R + A
Sbjct: 214 PPTLFTFGVVMKAFCAVN--EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH-----SLGVYLGA 399
L E M + + +I L K + + A++V M G + G +
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 400 LL-IHRLGSA-----RRPVPAAKIFSLLP---------EDQKC--------------TAT 430
L I R+ +A R P P IF+ L +D K T
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
Y +LI Y+ G AL++ M KG P++ ++ +L+ G KLG++ +A E
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE-- 449
Query: 491 SIQADALSKDAV 502
+ AD L + V
Sbjct: 450 -MSADGLKPNTV 460
>gi|302758538|ref|XP_002962692.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
gi|300169553|gb|EFJ36155.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
Length = 495
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 8 VYKILKYSTWDSAQDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
V + KY +D A +L + + P+ +N + ME+A F +
Sbjct: 60 VCGLAKYGYFDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKMEGEY 119
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + Y +L + R+ M+ +F M+EKG + VTY + + L AG VD A
Sbjct: 120 GCPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDDA 179
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +EM K C P V Y+ + ++ E + EM+++ L P+ ++ L++
Sbjct: 180 MVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDC 239
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L +AG+Y +A +F +M E G +PD +++++ K GE
Sbjct: 240 LDKAGRYGDAYRLFRRMMEQGCKPDAVIASVILDSFTKRGEV 281
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 180/427 (42%), Gaps = 30/427 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +++ G R+ +F+ + +G A +Y+ ++ L+ G D AV ++EEM
Sbjct: 20 TYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIVCGLAKYGYFDEAVELFEEM 79
Query: 128 KLKECYPTIVSYTAYMKILFLND--RVKEATDVYKEMI-QRGLPPNCYTYTVLMEYLVRA 184
++ P + S + + D ++++A ++++M + G PPN Y Y VL+ L +
Sbjct: 80 IRRKVAPPLGSCIGILNG-YCQDGGKMEQAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKK 138
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+ EE E+F +M+E G +P+ I CKAG +++ + M + + V+
Sbjct: 139 DRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGRVDDAMVVKKEMIQKSCSPDNVVY 198
Query: 245 KEALQTF-KVAD--ENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ F KV E + LL + + + P D V F + LV L
Sbjct: 199 SILINAFCKVGKIYEGEKLLAEMLEKKLQP------DVVCFSS------------LVDCL 240
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K L +M++ + D+ + S I++ AL V DL L
Sbjct: 241 DKAGRYGDAYRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELVNEFVDRDLPLPS 300
Query: 361 TAYL-ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+ L+ ++ + +++ M G A L+ L + V A ++
Sbjct: 301 AGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRPLQCSYATLLRELCRRKNAVEALELVK 360
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM---CRKGIHPSLGTFNVLLAGLEKL 476
+ + + +I + D+A +Y+ M ++ + PS+ T+N+LL L
Sbjct: 361 EMRAAGYTSVDLSCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSVSTYNILLERLCGE 420
Query: 477 GRVSDAE 483
GR+ DA+
Sbjct: 421 GRLGDAK 427
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 25 KNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
++LP+ + ++NQ++K +E ++ SRG + +Y T+L E R
Sbjct: 294 RDLPLP-SAGSINQLVKRIVVGDKVEDGVRLLKTMA-SRGSRPLQCSYATLLR---ELCR 348
Query: 82 ISSMKYVFELMQE-KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK---LKECYPTIV 137
+ EL++E + +V + V+ L VD A ++EEMK +E P++
Sbjct: 349 RKNAVEALELVKEMRAAGYTSVDLSCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSVS 408
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y ++ L R+ +A D+++EMI+ G P+ +Y +L+E L +AGK + E+F ++
Sbjct: 409 TYNILLERLCGEGRLGDAKDLFQEMIESGRIPDVNSYEILVEALCKAGKIFQGHELFKQL 468
Query: 198 QEAGVQPDKAACNILIEKCCK 218
G P C +++ CK
Sbjct: 469 ISLGFIPSSEMCATIVDGLCK 489
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +++++D +A R +F M E+G DAV + ++ + G+V A+ +
Sbjct: 229 DVVCFSSLVDCLDKAGRYGDAYRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELV 288
Query: 125 EEMKLKEC-YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
E ++ P+ S +K + + D+V++ + K M RG P +Y L+ L R
Sbjct: 289 NEFVDRDLPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRPLQCSYATLLRELCR 348
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK---AGETRTI--------------- 225
EALE+ +M+ AG +C +IE CK E R +
Sbjct: 349 RKNAVEALELVKEMRAAGYTSVDLSC--VIEMLCKMKMVDEARGLYEEMKSSQQQELLPS 406
Query: 226 -----ILILRYMKENRLALRYPVFKEALQTFKVADEN 257
IL+ R E RL +F+E +++ ++ D N
Sbjct: 407 VSTYNILLERLCGEGRLGDAKDLFQEMIESGRIPDVN 443
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + EM+ + P + +Y ++ L + RVKEA D+++E+ RG +Y+ ++
Sbjct: 2 AIGVLREMQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIVC 61
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAAC-NILIEKCCKAGETRTIILILRYMK 233
L + G ++EA+E+F +M V P +C IL C G+ I + R M+
Sbjct: 62 GLAKYGYFDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKME 116
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ + M +G +Y +++ L + A+ + +EM+ T V + +++L
Sbjct: 323 LLKTMASRGSRPLQCSYATLLRELCRRKNAVEALELVKEMRAAG--YTSVDLSCVIEMLC 380
Query: 148 LNDRVKEATDVYKEM---IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
V EA +Y+EM Q+ L P+ TY +L+E L G+ +A ++F +M E+G P
Sbjct: 381 KMKMVDEARGLYEEMKSSQQQELLPSVSTYNILLERLCGEGRLGDAKDLFQEMIESGRIP 440
Query: 205 DKAACNILIEKCCKAGE 221
D + IL+E CKAG+
Sbjct: 441 DVNSYEILVEALCKAGK 457
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT--KAGHSLG 394
DHR ++ A F+ + ++Y ++ L K F + E+ EEM K LG
Sbjct: 31 DHRVKE-AFDLFQEIHARGFTAKASSYSYIVCGLAKYGYFDEAVELFEEMIRRKVAPPLG 89
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIY 451
+G +L + A ++F + + C T Y L+ ++ +++
Sbjct: 90 SCIG-ILNGYCQDGGKMEQAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKKDRVEEMREMF 148
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQAD 495
M KG P+L T+ + GL K GRV DA + +KE +KS D
Sbjct: 149 LEMKEKGCEPNLVTYCTYILGLCKAGRVDDAMVVKKEMIQKSCSPD 194
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 193/462 (41%), Gaps = 38/462 (8%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQ 93
TV +VL+ KA FFNW GF H+ +Y ML+I G A+ ++ + ++F + +
Sbjct: 88 TVFEVLRLIKTPSKALQFFNWAP-ELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 146
Query: 94 EKG--INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ ++ + S++ AG +V ++ MK P++V++ + + IL R
Sbjct: 147 RSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGR 206
Query: 152 VKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
A V+ EM+ G+ P+ YT+ +L+ + +E F +M PD N
Sbjct: 207 TNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYN 266
Query: 211 ILIEKCCKAGETRTIILILRYM--KENRLALRYPVFKEALQTFKVADENDSLL----WQV 264
L++ C+AG+ ++ M K L + ++ + + E D L V
Sbjct: 267 TLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMV 326
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL- 323
P I+ N T I+G L + + + I + G + +
Sbjct: 327 SKGLKPNEITYN-------TLIKG-----------LCEVQKIDKIKQIFEGALGGGGFIP 368
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D+ ++T++ +C+ + AL FE + +++ + Y LI L + F + ++
Sbjct: 369 DTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLF 428
Query: 384 EEMTKA-------GHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTALI 435
+E+++ G + V + L + A ++F L+ + ++ LI
Sbjct: 429 DELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLSFKILI 488
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ G+ + ++ M R+ P L T+ L+ GL + G
Sbjct: 489 KGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKG 530
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 13/241 (5%)
Query: 11 ILKYSTWDSAQ----DLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFN 63
+LK + AQ ++L + D+YT N +++ + +++ + FF +SR + +
Sbjct: 201 LLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFK-CD 259
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVDGAV 121
D TY T++D A +++ V M +K N+ D VTYT+++ ++D A+
Sbjct: 260 PDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEAL 319
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG--LPPNCYTYTVLME 179
++EEM K P ++Y +K L ++ + +++ + G +P C T LM
Sbjct: 320 VVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTC-TLNTLMN 378
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
AG +ALE+F KM V+PD A ++LI C+ G + + E + L
Sbjct: 379 AHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILL 438
Query: 240 R 240
R
Sbjct: 439 R 439
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D T T+++ A ++ VFE M + D+ TY+ ++ L G+ + A
Sbjct: 365 GFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERA 424
Query: 121 VNIWEEMKLKE-------CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+++E+ KE C P + +Y + + L N + +A V++++++RG + +
Sbjct: 425 EQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG-TQDPLS 483
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ +L++ R G +E E+ M PD LI+ + GE
Sbjct: 484 FKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGE 531
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/460 (20%), Positives = 191/460 (41%), Gaps = 28/460 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTYTT+L F +A + VF M+ G + T+ +++ N G
Sbjct: 363 KGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAE 422
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +++++KL C P IV++ + + N + + ++KEM + G T+ L+
Sbjct: 423 MMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLIS 482
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G +++A+ ++ M EAGV PD + N ++ + G +L M++ R
Sbjct: 483 AYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKP 542
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L + E + + + A E + +E + + LVL+
Sbjct: 543 NELSYSSLLHAYANGKEIERM--------------NAFAEEIYSGSVETHAVLLKTLVLV 588
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA--LLAFEYSVKMDLN 357
K L+ + + + I D ++ ++ + + A +L F + + +
Sbjct: 589 NSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPS 648
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
L T Y +L+ + + F K EI+ E+ + G +I+ R A++I
Sbjct: 649 L--TTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRI 706
Query: 418 FS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
FS L+P+ TY I Y + +A+ + + M ++G P T+N ++
Sbjct: 707 FSEMKDSALVPD----VVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVD 762
Query: 472 GLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDL 511
KL + +A + K ++ ++ + E+I +
Sbjct: 763 WYCKLDQRHEANSFVKNLSNLDPHVSKEEESRLLERIAKM 802
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 5/191 (2%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTM---LDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
A F+WV R+ N + F+ + + + I G+A R+SS + +Q G++ID YT
Sbjct: 139 ALAVFHWV-RTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHIDVYAYT 197
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF-LNDRVKEATDVYKEMIQ 164
+++ S++G AVN++ +M+ C PT+++Y + + + T + + M
Sbjct: 198 CLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRS 257
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
RG+ P+ YTY L+ R YEEA+ +F +M+ G PDK N L++ K+ +
Sbjct: 258 RGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQE 317
Query: 225 IILILRYMKEN 235
+ +L+ M+ N
Sbjct: 318 AMKVLQEMEAN 328
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWV---SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N VL + M W + RSRG D +TY T++ ++F+
Sbjct: 230 TYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQ 289
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ +G D VTY +++ + A+ + +EM+ PT V+Y + +
Sbjct: 290 MKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGL 349
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
++EA D+ +M+ +G+ P+ +TYT L+ +AGK + A+++F +M+ G +P+ N
Sbjct: 350 LEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNA 409
Query: 212 LIE 214
LI+
Sbjct: 410 LIK 412
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 61 GFNHDRFTYTTMLDIFGE-AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G N TY +L+++G+ S++ + E M+ +G+ D TY +++ +
Sbjct: 223 GCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEE 282
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV+++++MKL+ P V+Y A + + + R +EA V +EM G P TY L+
Sbjct: 283 AVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLIS 342
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ G EEAL++ ++M G++PD L+ KAG+ I + M+
Sbjct: 343 AYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMR 396
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R RG + D T ML I+G + ++ + M E TY S+M+ S + +
Sbjct: 606 RRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENF 665
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ I E+ K P +SY + N R+KEA+ ++ EM L P+ TY
Sbjct: 666 QKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTF 725
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ + EA+++ M + G +PD+ N +++ CK
Sbjct: 726 IATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCK 766
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y LI + + + + + ++M G + L+ G +RRP A K+ +
Sbjct: 267 YNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEME 326
Query: 423 ED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ + TY +LI Y G ++AL + M KGI P + T+ LL+G EK G+
Sbjct: 327 ANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGK 384
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 189/459 (41%), Gaps = 46/459 (10%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE----KGINIDAVTYTSVMHWLSNAGD 116
G N ++ +LD F A+R S F + + I + TY V+ L GD
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D AV +++ ++ ++ P ++Y+ M L DR+ A D+ EM + + P+ Y
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233
Query: 177 LMEYLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ +AG++E+ + ++ K+ ++ G +P+ A N++++ CK G + + + M N
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293
Query: 236 RL---ALRYPVFKEAL--------------QTFKVADENDSLLWQVHPQFSPEFISDNDA 278
L + Y + L + K D+ ++ + + +A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL------------DSA 326
+F D G + L+ N++ SG++D++I+L D+
Sbjct: 354 WKF--WDSAGFAGLRN------LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTV 405
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
T+I C + + A FE + L+ +Y ++I L + ++ E+M
Sbjct: 406 TFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGS 443
K G ++ LI R A +I+S + D C+ TY LI A
Sbjct: 466 DKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKM-ADNGCSPTVITYNTLIDGLCKAEK 524
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+A + + M G P + T+ L+ GL ++ DA
Sbjct: 525 YQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDA 563
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 198/472 (41%), Gaps = 36/472 (7%)
Query: 35 TVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
T N VL++ +++A F+ + R R DR TY+T++ + R+ + +
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRR-RQVAPDRITYSTLMCGLAKQDRLDHALDLLDE 218
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLND 150
M + D V Y +++ AG+ + + +W+++ K P + +Y + L
Sbjct: 219 MPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
R KE +V++ M+ L P+ TY +L+ L R+G + A ++S++ + G+ D A N
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLA-LR----YPVFKEALQTFKVADENDSLLWQVH 265
L++ C+AG + ++ A LR Y + + L + DE LW +
Sbjct: 339 SLVKGFCQAGRVQE---AWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIE-LWDL- 393
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI-DSLLSGIMDKSIQLD 324
+ D V F T + GL K ++ +SG QLD
Sbjct: 394 --LEKDVACIPDTVTFGT--------LIHGLCQNGFANKAFTIFEEARVSG-----KQLD 438
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S++I C+ R A+ +E K Y ALI ++ I
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
+M G S V LI L A + A+ + + E+ TY +LI FS
Sbjct: 499 KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYR--KEKKS 491
D AL I+K + KG+ + N+L+ GL G+V +A ++ KEKK+
Sbjct: 559 KIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN 610
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 186/481 (38%), Gaps = 27/481 (5%)
Query: 13 KYSTWDSAQDLLKNLP---IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDR 66
K D A DLL +P ++ D N +L EK ++ + + G +
Sbjct: 205 KQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNL 264
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY MLD + R + V+E M + D +TY ++H L +GDVDGA ++ E
Sbjct: 265 ATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSE 324
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ Y + +K RV+EA + GL N TY ++++ L +G
Sbjct: 325 IIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGM 383
Query: 187 YEEALEIFSKMQ-EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+EA+E++ ++ + PD LI C+ G I +E R++
Sbjct: 384 VDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF---EEARVS------G 434
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS-IDQGLVLILLKKK 304
+ L F + + L + E + D P S I L+ +
Sbjct: 435 KQLDVFSYSSMINGLC------NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ S + D +T+I+ C + A V+ + T Y
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
+LI L I +++ G + V + +LIH L SA + A +FS + E
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608
Query: 425 QKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ C TY L+ + G DKA ++ ++ G+ P + ++N + GL R+ +
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668
Query: 482 A 482
Sbjct: 669 G 669
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D TY +++ K+I +++ + KG+ +D + + ++H L +AG VD A
Sbjct: 539 GFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598
Query: 121 VNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
++++ +MK K+ C P +V+Y M L+ + +A ++ + + GL P+ +Y ++
Sbjct: 599 LHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIK 658
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L + E +++ ++ G+ P NIL+ K G
Sbjct: 659 GLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++D +A++ V M E G D TY S++ L + +D A++IW+++
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGK 186
K ++ + + L +V EA V+ +M ++ PPN TY LM+ L G
Sbjct: 571 LYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGY 630
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
++A +++ + E G++PD + N I+ C I +L
Sbjct: 631 IDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLL 673
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK-GINIDAVTYTSVMHWLSNAGDVD 118
+G D + ++ A ++ +VF M+EK + VTY ++M L G +D
Sbjct: 573 KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID 632
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +W + P I+SY +K L DR+ E + E++ RG+ P T+ +L+
Sbjct: 633 KAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Query: 179 EYLVRAGKYE 188
+++ G +
Sbjct: 693 RAVIKYGPIQ 702
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 188/421 (44%), Gaps = 20/421 (4%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQE-KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY +++ +A+ S V + M++ K + D VTY++V++ G++D A I E
Sbjct: 43 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 102
Query: 127 MKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
M ++ P +V+YT+ + L + ++ A ++ +EM +G+ P+ +T++ L+ A
Sbjct: 103 MVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 162
Query: 186 KYEEALEIFSK-MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
K +EAL+++ + + + +PD LI+ CK+G + +L M+ + +
Sbjct: 163 KVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 222
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
L A + D L S + + V TT I G L
Sbjct: 223 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPN---VVTYTTLIHG-----------LCAAH 268
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ A L+ + D+ + +++ C R + A F+ +R Y
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYT 328
Query: 365 ALIGILIKLNTFPKVAEIVEEM-TKAGHSLGVYLGALLIHRLGSARRPVPAAK-IFSLLP 422
L+ + + ++E M T AG V ++++ A+R V AA+ I ++
Sbjct: 329 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 388
Query: 423 EDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+ A TY++LI AG D A+++ K M K + PS+GTFN ++ L +LG + +
Sbjct: 389 RNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDE 448
Query: 482 A 482
A
Sbjct: 449 A 449
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 101/497 (20%), Positives = 198/497 (39%), Gaps = 73/497 (14%)
Query: 6 SNVYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLK---THPPMEKAWLFFNWVSRS 59
S V + + D A ++++ + +K D +T + ++ +++A + + S
Sbjct: 118 SVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTS 177
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ D TYT ++D F ++ + + +M+ + + VTY+S++H L AGD+D
Sbjct: 178 SSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 237
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ M K C P +V+YT + L +V A + EM PP+ +Y L++
Sbjct: 238 ALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLD 297
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G+ EEA ++F +M PD+ L+ C A ++E R L
Sbjct: 298 GYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASR----------LEEARFLL 347
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
EN + P + VT I +V
Sbjct: 348 ----------------ENMKTAAGIDP-------------DVVTYSI---------VVAG 369
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ K V + ++ +++ ++ S++I+ C R D A+ + V +
Sbjct: 370 YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPS 429
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
+ ++IG L +L + +++ M G G+ L+ R A ++F
Sbjct: 430 VGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 489
Query: 419 -------------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+L+PE ++ALI A DKA+ + + + + P+
Sbjct: 490 VMRKKAKKSSSAANLVPEQ-----AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 544
Query: 466 FNVLLAGLEKLGRVSDA 482
++ GL + GR +A
Sbjct: 545 CLAIVDGLLRAGRTEEA 561
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 179/445 (40%), Gaps = 29/445 (6%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIF---GEAKRISSMKYVFELMQEKGINIDAVTY 104
KA+ + + D TY+T+++ F GE R + + + E++ GI D VTY
Sbjct: 59 KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDR--ACEILREMVTRDGIAPDVVTY 116
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI- 163
TSV+ L G +D A + EMKLK P +++A + +V EA +YKE++
Sbjct: 117 TSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILT 176
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
P+ TYT L++ ++G E+A+++ M+ P+ + L+ CKAG+
Sbjct: 177 SSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 236
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDS---LLWQVHPQFSPEFISDNDAVE 280
+ + R M + + A + D+ L+ ++ P D V
Sbjct: 237 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPP-----DTVS 291
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+ L+ + + L + KS D + ++ C+ R
Sbjct: 292 Y------------NALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASR 339
Query: 341 RDGALLAFE-YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ A E ++ + Y ++ + F + AE ++EM + +
Sbjct: 340 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 399
Query: 400 LLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
LI L A R A ++ + + T+ ++IG G D+A K+ M
Sbjct: 400 SLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 459
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA 482
G+ P + T+ LL G + GR+ A
Sbjct: 460 GLEPGMVTYTTLLEGFSRTGRMEIA 484
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 149/375 (39%), Gaps = 38/375 (10%)
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
EC PT+V++T + +++K+A +++M + + PN TY V++ L +A +A
Sbjct: 2 ECQPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKA 60
Query: 191 LEIFSKMQEA-GVQPDKAACNILIEKCCKAGETRTIILILRYM-KENRLALRYPVFKEAL 248
E+ +M++ V PD + +I CK GE ILR M + +A + +
Sbjct: 61 YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL---ILLK--- 302
+ D V D + T +D+ L L IL
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
K ++V +L+ G KS L+ A+ +L K N+
Sbjct: 181 KPDVVTYTALIDGFC-KSGNLEKAM----------------KMLGVMEGRKCVPNV--VT 221
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF---- 418
Y +L+ L K + ++ MT G V LIH L +A + V AA++
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHK-VDAARLLMDEM 280
Query: 419 --SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ P D T +Y AL+ Y G ++A +++K M K P T+ L+ G
Sbjct: 281 TATCCPPD---TVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNA 337
Query: 477 GRVSDAEIYRKEKKS 491
R+ +A + K+
Sbjct: 338 SRLEEARFLLENMKT 352
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 14/170 (8%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNH 64
+ K D A ++LKN+ ++ T N V L M++AW ++ + G
Sbjct: 405 LCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA-AHGLEP 463
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN-------IDAVTYTSVMHWLSNAGDV 117
TYTT+L+ F R+ +FE+M++K + +++++ L A ++
Sbjct: 464 GMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREI 523
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
D A+ + EE++ +EC P A + L R +EA + + + GL
Sbjct: 524 DKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 25/333 (7%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+D + + + + +FE M+ +G+ D VTY S++ G +D V +EE
Sbjct: 96 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEE 155
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P +++Y A + ++ + + ++EM + GL PN +Y+ L++ + G
Sbjct: 156 MKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGM 215
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPV 243
++A++ + M+ G+ P++ LI+ CK G + M + + + Y
Sbjct: 216 MQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTA 275
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI-LLK 302
+ L ++ E LL E V DI+ +++ VLI L
Sbjct: 276 LIDGLCGWENPTEGLHLL-----------------DEMVELDIK--VTVVTFCVLIDGLC 316
Query: 303 KKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K LV AID D +Q ++A+ + +I+ C + + A FE + L +R
Sbjct: 317 KNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDR 376
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
TAY +L+ K + + ++M + G L
Sbjct: 377 TAYTSLMDGNFKQGNVLEALALRDKMVETGMKL 409
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 139/334 (41%), Gaps = 19/334 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY +M+D FG+ R+ FE M++ D +TY ++++ G +
Sbjct: 124 RGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPK 183
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + EMK P +VSY+ + +++A Y +M + GL PN YTYT L++
Sbjct: 184 GLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 243
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ G +A + ++M + GV+ + LI+ C + +L M E +
Sbjct: 244 AYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKV 303
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ + V + L K+ + ++ F + N A+ T I+G
Sbjct: 304 TVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFG---LQANAAI--YTAMIDG-------- 350
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
L K + A +L + K + D +++++ N AL + V+ +
Sbjct: 351 ---LCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGM 407
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
L+ AY +L+ L N K +EEM G
Sbjct: 408 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 441
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 173/446 (38%), Gaps = 53/446 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F+ + R R F R + +L F + + +K F+ M G TY
Sbjct: 41 VEEAIQCFSKMKRFRVFPKTR-SCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYN 99
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + GDV+ A ++EEMK + P V+Y + + R+ + ++EM
Sbjct: 100 IMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 159
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
P+ TY L+ + GK + LE F +M+ G++P+ + + L++ CK G +
Sbjct: 160 CCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQA 219
Query: 226 ILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
I M+ L + + + K+ + +D+ A E +
Sbjct: 220 IKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRL---------------ANEMLQV 264
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+E + L+ L +N LL +++ I++ +I+ C ++ A
Sbjct: 265 GVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKA 324
Query: 345 LLAFEYSVKMDLNLERTA--YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
+ F + D L+ A Y A+I L K N + E+M + G
Sbjct: 325 IDYFG-RISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKG------------ 371
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L+P+ YT+L+ F G+ +AL + M G+
Sbjct: 372 -----------------LVPD----RTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLD 410
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKE 488
L + L+ GL ++ A + +E
Sbjct: 411 LLAYTSLVWGLSHCNQLQKARSFLEE 436
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 1/171 (0%)
Query: 68 TYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+ ++D + K +S ++ Y + + G+ +A YT+++ L V+ A ++E+
Sbjct: 307 TFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQ 366
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K P +YT+ M F V EA + +M++ G+ + YT L+ L +
Sbjct: 367 MAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQ 426
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++A +M G+ PD+ C +++K + G + + Y+ +++L
Sbjct: 427 LQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQL 477
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA +F +S G + YT M+D + ++ + +FE M +KG+ D YT
Sbjct: 321 VSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYT 380
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+M G+V A+ + ++M +++YT+ + L +++++A +EMI
Sbjct: 381 SLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 440
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFS---KMQEAGVQPDKAACNILIE 214
G+ P+ +++ G EA+E+ S K Q D A NI ++
Sbjct: 441 GIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQLLTSDNDNALPNIYLD 492
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P + L L+ G EEA++ FSKM+ V P +CN L+ K K G+T +
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82
Query: 229 LRYM 232
+ M
Sbjct: 83 FKDM 86
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 193/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + V++ + E Y LI K + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ AAK +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D ++ K M R+ + +N L+ K +DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSXFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAK 458
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 197/472 (41%), Gaps = 67/472 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL---MQEKGINIDAV 102
++ A F ++ RSR + + G R+ V L M+ + +A
Sbjct: 62 LDDAIDLFGYMVRSRPLP----SVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAY 117
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
++T +M + + A++ + ++ +PT+V++ + L + DR+ EA D++ +M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ PN T+T LM L R G+ EA+ + +M E G+QP++ +++ CK G+T
Sbjct: 178 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 223 RTIILILRYMKE-----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN- 276
+ + +LR M+E + + + + + +D ++ + + P+ ++ N
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293
Query: 277 ------------DAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKS 320
DA + + +E ++ D L+ +K+ + L ++ +S
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I + S++I+ C R D A F + + + + LI +
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI 413
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFS 440
+++ EMT+AG L+ T TYT LI +
Sbjct: 414 KLLHEMTEAG----------LVAN-----------------------TITYTTLIHGFCQ 440
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
G + A + + M G+ P++ T N LL GL G++ DA E+++ +KS
Sbjct: 441 VGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 172/446 (38%), Gaps = 101/446 (22%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T++D + R S +F MQEK I D VTY +++ +G A + +EM
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEML 315
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
++ P +V+++A + + EA ++Y EM+ R + P+ TY+ +++ + + +
Sbjct: 316 ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLD 375
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A +F G PD N LI C+A I +L M E L + +
Sbjct: 376 AAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 435
Query: 249 QTF-KVADEN--DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
F +V D N LL ++ I G+ N
Sbjct: 436 HGFCQVGDLNAAQDLLQEM---------------------------ISSGVC------PN 462
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE--YSVKMDLNLER--- 360
+V ++LL G+ CD+ + AL F+ KMD++ R
Sbjct: 463 VVTCNTLLDGL-------------------CDNGKLKDALEMFKAMQKSKMDIDASRPFN 503
Query: 361 ------TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
Y LI LI F + E+ EEM G
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG------------------------ 539
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
++P+ T TY+++I D+A +++ +M K P + TFN L+ G
Sbjct: 540 -----IVPD----TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590
Query: 475 KLGRVSDA-EIY-RKEKKSIQADALS 498
K G V D E++ ++ I ADA++
Sbjct: 591 KAGMVDDGLELFCEMGQRGIVADAIT 616
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 17 WDSAQDLLKNL---PIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
W A+ LL+ + I D T +N +K E L+ + RS TY
Sbjct: 304 WSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS--IIPSTVTY 361
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
++M+D F + R+ + +++F L KG + D +T+ +++ A VD + + EM
Sbjct: 362 SSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 421
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
++YT + + A D+ +EMI G+ PN T L++ L GK ++
Sbjct: 422 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKD 481
Query: 190 ALEIFSKMQEA-----------GVQPDKAACNILI 213
ALE+F MQ++ GV+PD NILI
Sbjct: 482 ALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILI 516
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/414 (19%), Positives = 154/414 (37%), Gaps = 71/414 (17%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R N D T++ +++ F + + + +++ M + I VTY+S++ +D
Sbjct: 317 RKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDA 376
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ K C P I+++ + RV + + EM + GL N TYT L+
Sbjct: 377 AEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 436
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G A ++ +M +GV P+ CN L++ C G+ + + + + M+++++ +
Sbjct: 437 GFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDI 496
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+A + F V P I L+
Sbjct: 497 ------DASRPFN----------GVEPDVQTYNI----------------------LICG 518
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L+ + + + L + + I D+ S++I+ C R D A F+ + +
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPD 578
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+ LI K E+ EM +R + A I
Sbjct: 579 VVTFNTLITGYCKAGMVDDGLELFCEM---------------------GQRGIVADAI-- 615
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
TY LI + + D AL I++ M G++P T +L GL
Sbjct: 616 ----------TYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGL 659
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEAKRISSMKYVFE 90
D+ + L+ M+K+ + + G D TY ++ + E K + + + ++E
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEA-EELYE 533
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M +GI D +TY+S++ L +D A +++ M K P +V++ +
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAG 593
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
V + +++ EM QRG+ + TY L+ + + AL+IF +M +GV PD
Sbjct: 594 MVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPD 648
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/416 (18%), Positives = 157/416 (37%), Gaps = 25/416 (6%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E G +++ S H + +D A++++ M P+++ + M ++ R
Sbjct: 42 EAGFGGESLKLQSGFHEIKG---LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPD 98
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
++K+M +P N Y++T+LM+ K AL F K+ + G P N L+
Sbjct: 99 VVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLL 158
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
C + + M + + + + +V + L + P I
Sbjct: 159 HGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQI 218
Query: 274 SDNDAVEFVTT--DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI--------------- 316
+ V+ + D L++ + + + N+V ++++ G+
Sbjct: 219 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIE 278
Query: 317 -MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+K I D + +I C R A + ++ +N + + ALI +K
Sbjct: 279 MQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGK 338
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYT 432
F + E+ +EM + +I R A +F L P + C+ T+
Sbjct: 339 FFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPT-KGCSPDIITFN 397
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
LI Y A D +K+ M G+ + T+ L+ G ++G ++ A+ +E
Sbjct: 398 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQE 453
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M+D + R+ +F+ M K + D VT+ +++ AG VD
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDD 597
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y + D + A D+++EMI G+ P+ T ++
Sbjct: 598 GLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLT 657
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + E A+ + +Q
Sbjct: 658 GLWSKEELERAVAMLEDLQ 676
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 20 AQDLLKNLP---IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A++L + +P I D+ T + + L +++A F+ + S+ F+ D T+ T++
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG-SKSFSPDVVTFNTLI 586
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ +A + +F M ++GI DA+TY ++++ ++DGA++I++EM Y
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVY 646
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEM 162
P ++ + L+ + ++ A + +++
Sbjct: 647 PDTITIRNMLTGLWSKEELERAVAMLEDL 675
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 173/428 (40%), Gaps = 24/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + YT+ + + A ++ VF LM +G A TYT+++H L AG V A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ M+ C P Y + L R +EA + +E + G PN Y L++
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
AG+ E AL++F M P+ LI CK+G+ +++ M E L
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ +Q N+ H Q + + + V D + ID L
Sbjct: 282 VVTYTALIQ----GQCNEG-----HLQCAFRLLHLMETNGLVPNDWTFSVLIDA-----L 327
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K++ + L ++ K ++++ V +++I+ C + D A + + +
Sbjct: 328 CKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+Y +LI L + + ++E+M + G ++I L KIF
Sbjct: 388 HSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDK 447
Query: 421 L------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ P+ TYT + Y G + A + M +G+ P+L T+N L+ G
Sbjct: 448 MIATGINPD----IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 475 KLGRVSDA 482
LG VS A
Sbjct: 504 NLGLVSQA 511
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 171/422 (40%), Gaps = 24/422 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT+++ + A I + K + G+ D+ YTS + AG + A ++ M
Sbjct: 74 TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L+ C T +YTA + L V+EA V+ M P+ + Y ++ L AG+
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EEA + + G +P+ N LI+ C AGE + + M NR + + E
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253
Query: 248 LQTFKVAD--ENDSLLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + E +L+ V P ++ T I+G ++G + +
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVT-------YTALIQG--QCNEGHLQCAFRL 304
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+L+ + L+ + S +I+ C + + A L VK + + Y
Sbjct: 305 LHLMETNGLVP---------NDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+LI L K E++++M G + + LI L ++ A + + E
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415
Query: 424 D--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
Q TYT +I ++ KI+ M GI+P + T+ V + + GR+ D
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMED 475
Query: 482 AE 483
AE
Sbjct: 476 AE 477
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 176/430 (40%), Gaps = 35/430 (8%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y TM+ EA R + + E G + V Y +++ NAG+++ A+ ++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E M C P + +YT + L + +V+ A ++ M++ GL PN TYT L++
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G + A + M+ G+ P+ ++LI+ CK + L L + + + + V+
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 245 KEAL----QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ +T K+ D D L+ ++ S F+ D + ++ I+G L
Sbjct: 356 TSLIDGLCKTGKI-DAADELMQKM---ISEGFVPDAHSY---SSLIDG-----------L 397
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
++K L +L +M+K IQ + II+ +G F+ + +N +
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y + + ++ +M G + LI + A F +
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517
Query: 421 L------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG---TFNVLLA 471
+ P + +YT L+ + S+D ++ I+K K + S + +L+
Sbjct: 518 MVGKGWKPNED----SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIY 573
Query: 472 GLEKLGRVSD 481
GL + G V++
Sbjct: 574 GLLQKGSVAE 583
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF D +Y++++D K++S + E M EKGI VTYT ++ L +
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
G I+++M P IV+YT +++ R+++A + +M+ RG+ PN TY L+
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G +A F M G +P++ + +L+
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 85/162 (52%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + +T++ ++D + +++ + + +KG+ ++ V YTS++ L G +D
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + ++M + P SY++ + L ++ +AT + ++M+++G+ + TYT+++
Sbjct: 370 AADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ LVR E +IF KM G+ PD + + C+ G
Sbjct: 430 DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEG 471
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF + Y ++D + A + VFE M + + TYT ++H L +G V+
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++ M P +V+YTA ++ ++ A + M GL PN +T++VL+
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ L + K EEA + + GV+ ++ LI+ CK G+
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N D TYT + + E R+ + + M ++G+ + VTY +++ +N G V A
Sbjct: 452 GINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY---TYTVL 177
+ +E M K P SYT ++++ + D++K + L + Y + +L
Sbjct: 512 FSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKIL 571
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ L++ G E + S M+E G QP
Sbjct: 572 IYGLLQKGSVAEFSSLLSVMKEHGYQPSN 600
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D+ ++ ++ I +R + + F+ +++K D + YT+++ AG++ A ++
Sbjct: 211 DKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGNIPEAERVF 269
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EMK+ C P + +YT + L ++ A DV+ EM+ G PN T+ L+ V+A
Sbjct: 270 TEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKA 329
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
G+ E+ L+++++M+ G PD N LIE CK G + +L M
Sbjct: 330 GRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSM 377
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
P +A FFNW + GF H Y M+D+ G+ + V +LM+ + + I T+
Sbjct: 121 PFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETF 180
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR------------- 151
+ ++ AG AV+ + M+ C P ++++ + IL R
Sbjct: 181 SILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKD 240
Query: 152 ---------------------VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+ EA V+ EM G PN YTYT++++ L R G+ A
Sbjct: 241 KFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRA 300
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
++F++M + G +P+ N L+ KAG T ++ + MK
Sbjct: 301 HDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMK 343
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D YT ++ + A I + VF M+ G + TYT V+ L G + A
Sbjct: 242 FEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAH 301
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+++ EM C P +++ +++ R ++ VY +M + G PP+ TY L+E
Sbjct: 302 DVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESH 361
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ G +EAL++ + M + G P+ + N L K + + MKE
Sbjct: 362 CKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKE 414
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+TYT ++D +I+ VF M + G +++T+ +++ AG + + ++ +
Sbjct: 282 YTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQ 341
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P V+Y ++ + + EA V M+++G PN T+ L + +
Sbjct: 342 MKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRD 401
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
A +++KM+E + + NIL+ T ++ + + M E+
Sbjct: 402 VNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDED 450
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 3/198 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + T+ +L + +A R + V+ M+ G D VTY ++ G++D A
Sbjct: 311 GCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEA 370
Query: 121 VNIWEEMKLKECYPTIVSYTA-YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + M K C P ++ + I L D V A +Y +M + N TY +LM
Sbjct: 371 LKVLNSMVKKGCSPNASTFNGLFGSIAKLRD-VNGAHRLYAKMKELKCKANTVTYNILMR 429
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR-LA 238
V + L++ +M E V+P+ +LI C G R M E + L
Sbjct: 430 MFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLK 489
Query: 239 LRYPVFKEALQTFKVADE 256
PV+++ LQ + A +
Sbjct: 490 PSLPVYEKVLQQLRKAGQ 507
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 139/356 (39%), Gaps = 56/356 (15%)
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T+++L+ VRAG EA+ F++M++ +PDK A +ILI C+
Sbjct: 179 TFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRK------------- 225
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVE------------ 280
+ A E S + +F P+ I + V
Sbjct: 226 -------------------RRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAE 266
Query: 281 --FVTTDIEGPLSIDQGLVLI---LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
F + G + ++ L + + + + ++D + +S + ++ V+
Sbjct: 267 RVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVH 326
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R + L + +M + Y LI K + +++ M K G S
Sbjct: 327 VKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNA 386
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYK 452
L + R A ++++ + E KC T TY L+ ++ S D LK+ K
Sbjct: 387 STFNGLFGSIAKLRDVNGAHRLYAKMKE-LKCKANTVTYNILMRMFVDTKSTDMVLKLKK 445
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
M + P++ T+ VL+A +G ++A Y+ ++ ++ L K ++P+ EK+
Sbjct: 446 EMDEDDVEPNVNTYCVLIAMYCGMGHWNNA--YKFFREMVEEKCL-KPSLPVYEKV 498
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/182 (17%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+K + D+ T N ++++H +++A N + + +G + + T+ + + +
Sbjct: 342 MKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVK-KGCSPNASTFNGLFGSIAKLR 400
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
++ ++ M+E + VTY +M + D + + +EM + P + +Y
Sbjct: 401 DVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYC 460
Query: 141 AYMKILFLNDRVKEATDVYKEMI-QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+ + A ++EM+ ++ L P+ Y +++ L +AG+ ++ E+ + M +
Sbjct: 461 VLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVD 520
Query: 200 AG 201
G
Sbjct: 521 RG 522
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 199/470 (42%), Gaps = 28/470 (5%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
+K ++ ++ ++K++ + K++ F+ + R G D +TY T ++ + + +I +
Sbjct: 206 LKSCNFLMSSLVKSNE-LHKSFRVFDAMCRG-GVLIDVYTYATAINAYCKGGKIDEAVGL 263
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F M E G+ + VTY +++ L +G ++ A+ M + P++V+Y + L
Sbjct: 264 FLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVK 323
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
++ EA V EM +G PN + + L++ R G ++AL + M G++P+
Sbjct: 324 FEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVT 383
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
N L++ C+ + +L Y+ N L++ L + + DS L V
Sbjct: 384 HNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALL 443
Query: 269 SPEFISDNDAVE--------------------FVTTDIEG---PLSIDQGLVLILLKKKN 305
I ND++ F D +G + L+ L ++ N
Sbjct: 444 LRN-IKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGN 502
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+ + + ++++ + LD +T+I C + + A E +K + Y
Sbjct: 503 MEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNF 562
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED- 424
L+ L V ++ E G +Y AL++ +A R A +F+ L +
Sbjct: 563 LMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNK 622
Query: 425 -QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ Y LI + AG+ +A K+ M IHP++ T++ ++ G+
Sbjct: 623 VELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGM 672
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
++ G + +TY ML+ + A RI + +F + + + V Y ++ S AG+
Sbjct: 583 AKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGN 642
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
A + + M+ +PTI +Y++ + + ND V+EA +++EM GL PN + YT
Sbjct: 643 FTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTA 702
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ + G+ ++ I +M +QP+K I+I+ CK G T+ +L M N
Sbjct: 703 LIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANG 762
Query: 237 LA 238
++
Sbjct: 763 IS 764
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 168/380 (44%), Gaps = 32/380 (8%)
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K +P++ S M L ++ + ++ V+ M + G+ + YTY + + GK +E
Sbjct: 200 KGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDE 259
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKE 246
A+ +F KM E GV P+ N LI+ CK+G ++ M EN++ + Y +
Sbjct: 260 AVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVN 319
Query: 247 ALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTT--DIEGPLSIDQGLVLILLKK 303
L F+ DE +S+L +++ + FSP N ++ + +++ L + + L L K
Sbjct: 320 GLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGL-K 378
Query: 304 KNLVAIDSLLSGI-----MDKSIQLDSAVISTIIEVN-----------CDHRRRDGALLA 347
N V ++LL G M+++ Q+ ++S ++ VN C + D AL
Sbjct: 379 PNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKI 438
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT-KAGHSLGVYLGALLIHRL- 405
+ + ++ + + L+ L K + ++ + K G + L++ L
Sbjct: 439 VKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLC 498
Query: 406 --GSARRPVPAAK--IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
G+ P K + L D +Y LI +G ++A K+ + M ++G P
Sbjct: 499 ERGNMEEVFPVCKEMVERGLVLDG---ISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKP 555
Query: 462 SLGTFNVLLAGLEKLGRVSD 481
T+N L+ GL G++ D
Sbjct: 556 DTYTYNFLMKGLADKGKMDD 575
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 168/452 (37%), Gaps = 67/452 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK--GINIDAVTYTSVMHWLSNAGDV 117
+G + T+ T+L F ++ + V E + +N DA +Y V+H L +
Sbjct: 375 KGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--VLHLLCKSSKF 432
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI-QRGLPPNCYTYTV 176
D A+ I + + L+ T + L + EA D++ + ++GL N T
Sbjct: 433 DSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNA 492
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ L G EE + +M E G+ D + N LI CCK+G+ E
Sbjct: 493 LLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKI-----------EEA 541
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
L+ + K+ F P+ + N L
Sbjct: 542 FKLKEKMMKQG--------------------FKPDTYTYN------------------FL 563
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ L K + + +L D + + + ++E C+ R D A+ F V +
Sbjct: 564 MKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKV 623
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
L Y LI K F + ++ + M + ++ + +IH + A
Sbjct: 624 ELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKG 683
Query: 417 IF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
IF L+P YTALIG Y G D+ I + M I P+ T+ +++
Sbjct: 684 IFEEMRNEGLMPN----VFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMI 739
Query: 471 AGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
G K+G +A E + A+ +S D V
Sbjct: 740 DGYCKMGNTKEATKLLNE---MIANGISPDTV 768
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS + FTY++++ + K +FE M+ +G+ + YT+++ G +
Sbjct: 654 RSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQM 713
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D +I +EM P ++YT + KEAT + EMI G+ P+ TYTVL
Sbjct: 714 DQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVL 773
Query: 178 MEYLVRAGKYEEALE 192
+ + + EE L+
Sbjct: 774 QKGYCKENELEETLQ 788
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
TY I Y G D+A+ ++ M G+ P++ T+N L+ GL K GR+ +A +++
Sbjct: 243 TYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFK 299
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 119/280 (42%), Gaps = 22/280 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DRF++ T++ ++ V E M+ +G+ D VT+ S++H L V A
Sbjct: 302 GVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEA 361
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM + P V+YT + ++EA + EM G+ P TY ++
Sbjct: 362 SQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRK 421
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L GK +E + ++M E VQ D CN LI CK G+ + + + R M E+ L L
Sbjct: 422 LCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLD 481
Query: 241 YPVFKEALQTFKVADEND----SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+K + F A E D +L + FSP + S+ +
Sbjct: 482 QFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNY------------------SVLSWI 523
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
V L K N VA+ ++ +M + D AV ++I C
Sbjct: 524 VDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLC 563
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 157/377 (41%), Gaps = 23/377 (6%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F+ ++R+ G + Y ML + +A + + + M G+ +D ++ +V+
Sbjct: 260 FDQMTRA-GVAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYC 318
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G A+ + E M+ + +V++ + + L RVKEA+ + +EM G+ P+
Sbjct: 319 RKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHV 378
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TYT L++ RAG EEA+++ +M+ G+ P A N ++ K C+ G+ + + ++L M
Sbjct: 379 TYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEM 438
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
E ++ + + + + S A++ +E L +
Sbjct: 439 DERKVQADHVTCNTLINAYCKRGDMTS------------------ALKVKRRMMESGLQL 480
Query: 293 DQ----GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
DQ LV K K L L +M + +V+S I++ C+ L
Sbjct: 481 DQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIP 540
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ +K ++ Y +LI L K + EM G + A L +A
Sbjct: 541 DELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTA 600
Query: 409 RRPVPAAKIFSLLPEDQ 425
+PV A I + + + Q
Sbjct: 601 GKPVAALDILNEMAKKQ 617
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/366 (18%), Positives = 142/366 (38%), Gaps = 29/366 (7%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +++ M+ +E P + +A + L + A V+ +M + G+ N + Y ++
Sbjct: 221 ALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLH 280
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++AG A + ++M AGV D+ + N +I C+ G + + M+ +
Sbjct: 281 VCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKA 340
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVE--FVTTDIEGPLSID 293
+ + +V + + L +P+ ++ V+ D+E + +
Sbjct: 341 DVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLR 400
Query: 294 ---------------QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
++ L + + ++ LL+ + ++ +Q D +T+I C
Sbjct: 401 GEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKR 460
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
AL ++ L L++ Y AL+ K + E + EM AG S +
Sbjct: 461 GDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVL 520
Query: 399 ALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
+ ++ L + V I L P D+ A Y +LI G D A ++
Sbjct: 521 SWIVDGLCNKNNAVAVLAIPDELMKRGFPPDK---AVYRSLIRRLCKKGFIDLAGNVFNE 577
Query: 454 MCRKGI 459
M KG+
Sbjct: 578 MQGKGL 583
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 6/181 (3%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R D T T+++ + + ++S V M E G+ +D TY +++H A ++D
Sbjct: 441 RKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDE 500
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A EM P + + L + + E+++RG PP+ Y L+
Sbjct: 501 AKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIR 560
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK---AGETRTIILILRYMKENR 236
L + G + A +F++MQ G++ D C + C AG+ + IL M + +
Sbjct: 561 RLCKKGFIDLAGNVFNEMQGKGLEAD---CLVYATLACAYLTAGKPVAALDILNEMAKKQ 617
Query: 237 L 237
L
Sbjct: 618 L 618
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 344 ALLAFEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
A LA +MD + L+R ++ +I + + + + E M G V
Sbjct: 288 AALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNS 347
Query: 401 LIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
LIH L RR A+++ + P+ TYT L+ Y AG ++A+K+ M
Sbjct: 348 LIHGLCKERRVKEASQLLREMAMAGVAPDH----VTYTTLVDGYCRAGDLEEAVKLRGEM 403
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
G+ P + T+N +L L + G++ + + E ++ +QAD ++
Sbjct: 404 EAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVT 449
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 187/469 (39%), Gaps = 38/469 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG + TY ++ + I +F+ M++KGI + Y S+++ G +D
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + M + PT SY+ + L N + ++++EM +RG+ N YT+T L+
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 485
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ K +EA +F KM ++ V P++ N++IE C G R + M E L
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545
Query: 239 LRYPVFKEALQ----TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
++ + T V+ N EF++D + V +
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKAN-------------EFVADLENSYAVLNNFS-----LT 587
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ ++ L + + ++LD + I+ ++ + + F +
Sbjct: 588 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR------LGSA 408
+ + Y +I L K + ++M G+S +LI+ LGSA
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
++LP TY + + + G +KA ++ M +G S+ +FN+
Sbjct: 708 ELLCKEMLAGNVLPN----KFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 762
Query: 469 LLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
L+ GL K G++ +A ++ K I S D + I +L GD
Sbjct: 763 LIKGLCKAGKIQEAIDLMSK----ITESGFSPDCISYSTIIHELCKMGD 807
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 188/479 (39%), Gaps = 59/479 (12%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+S S G +++T + +L + ++ + + +F+ M + G+++D YT+ + +
Sbjct: 153 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 212
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++DGA + M+ + + V Y M L N RV+EA +V M+ G+ + TY
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK-------------CCKAGET 222
L+ R + E AL I M G P +A C+ +I++ CK G+
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ + Y + F +A + FK E
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFK---------------------------EMA 365
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+E P + +++ L K+ ++ L + DK I++ +++I C
Sbjct: 366 GRGLE-PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D A VK L +Y LI L + E+ EM + G + Y L
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 484
Query: 402 IHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
I+ ++ AA++F +++P + T+ +I Y G+ KA ++Y M
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNE----VTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
G+ P T+ L++GL VS A AD + AV + LLYG
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKA-------NEFVADLENSYAVLNNFSLTALLYG 592
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 14 YSTWDSAQDLLKNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
Y WD ++ + + S+T V LK H EK+ + F + + +G D YT
Sbjct: 603 YHLWDEMA--VRGVKLDLVSFTIIVYAALKQHDK-EKSCVLFREM-KEQGVKPDDIFYTC 658
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
M+D + + + ++ M G + + VT+T +++ L +G + A + +EM
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P +Y ++ +++A D++ M+Q G + ++ +L++ L +AGK +EA+
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAI 777
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ SK+ E+G PD + + +I + CK G+
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGD 807
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G++ + T+T +++ ++ + S + + + M + + TY + + + GD++ A
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M L+ +IVS+ +K L +++EA D+ ++ + G P+C +Y+ ++
Sbjct: 743 KDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHE 801
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L + G +A E++++M G++PD A NI I C GE+
Sbjct: 802 LCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGES 843
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 182/444 (40%), Gaps = 34/444 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + +T+T +++ F + K++ +F+ M + + + VT+ ++ G++
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++++M P +Y + + L L V +A + ++ N ++ T L+
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
R G++ E ++ +M GV+ D + I++ K + ++ R MKE +
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Query: 239 --LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y +AL +EN I + + + D P ++ +
Sbjct: 652 DDIFYTCMIDALSK----EEN--------------MIQALNCWDQMVVDGYSPNTVTHTV 693
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC--DHRRRDGALLAFE--YSV 352
++ L K + LL M L V+ NC D+ +G + + +S
Sbjct: 694 LINNLCKSGYLGSAELLCKEM-----LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 748
Query: 353 KMDLNLER-TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
+ +L ++ LI L K + +++ ++T++G S + +IH L
Sbjct: 749 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 412 VPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A ++++ L + Y I G +DKAL IY M R G+ P+ T+ L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868
Query: 470 LAGLEKLGRVSDAEIYRKEKKSIQ 493
L+G+ + D +R K+ IQ
Sbjct: 869 LSGISLMLHY-DFSCFRGTKQYIQ 891
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 154/398 (38%), Gaps = 63/398 (15%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P + +Y A + L N+R +A ++KEM RGL PN TY +L+ L + G E+AL +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395
Query: 194 FSKMQEAGVQ-----------------------------------PDKAACNILIEKCCK 218
F KM++ G++ P A+ + LI C+
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQ-VHPQFSPEFIS 274
G+ + + + R M E +A F + F K DE L + + P ++
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Query: 275 DNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
N +E + +I + +V + LK N SL+SG+ L S V S
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDN-YTYRSLISGLC-----LTSGV-SKAN 568
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
E D L Y+V + +L AL+ + F + + +EM G
Sbjct: 569 EFVAD--------LENSYAVLNNFSLT-----ALLYGFFREGRFTETYHLWDEMAVRGVK 615
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKI 450
L + ++++ + +F + E + YT +I + +AL
Sbjct: 616 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 675
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ M G P+ T VL+ L K G + AE+ KE
Sbjct: 676 WDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 713
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 29 IKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
I W++YT +N K E A LF + + N T+ M++ + I
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN--EVTFNVMIEGYCLVGNIRK 531
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+++ M E G+ D TY S++ L V A +++ S TA +
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
F R E ++ EM RG+ + ++T+++ ++ E++ +F +M+E GV+P
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Query: 205 D 205
D
Sbjct: 652 D 652
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 165/424 (38%), Gaps = 59/424 (13%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y +++ F + RI V + M+ K + D VTY ++ L + G +D A+ +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++ C PT+++YT ++ L V EA + EM+ RGL P+ +TY ++ + +
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G + A E+ ++ G +PD + NIL+ G+
Sbjct: 277 GMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGK----------------------- 313
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
W+ + + S+ VT I L+ L +
Sbjct: 314 -----------------WEEGEKLMTKMFSEKCDPNVVTYSI---------LITTLCRDG 347
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ +LL + +K + D+ +I C R D A+ E + + Y
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------ 418
++ L K + EI ++ + G S + L S+ + A +
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ P++ TY ++I G D+A ++ M HPS+ T+N++L G K R
Sbjct: 468 GIDPDE----ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 479 VSDA 482
+ DA
Sbjct: 524 IEDA 527
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAG 115
SRG D FTY T+ I G K + FE+++ KG D ++Y ++ L N G
Sbjct: 256 SRGLKPDMFTYNTI--IRGMCKE-GMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQG 312
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ + +M ++C P +V+Y+ + L + +++EA ++ K M ++GL P+ Y+Y
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ R G+ + A+E M G PD N ++ CK G+ + I + E
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 61 GFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + + +Y TM ++ +I ++ + E+M GI+ D +TY S++ L G VD
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS-NGIDPDEITYNSMISCLCREGMVDE 491
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M+ E +P++V+Y + R+++A +V + M+ G PN TYTVL+E
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Query: 180 YLVRAGKYEEALEI 193
+ AG EA+E+
Sbjct: 552 GIGFAGYRAEAMEL 565
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 73/178 (41%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D ++Y ++ F R+ E M G D V Y +V+ L G
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I+ ++ C P SY L+ + A + EM+ G+ P+ TY +
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ L R G +EA E+ M+ P NI++ CKA I +L M N
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS+ F+ D TY M+ ++ V + +TYT ++ G V
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ + +EM + P + +Y ++ + V A ++ + + +G P+ +Y +L
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNIL 304
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L+ GK+EE ++ +KM P+ +ILI C+ G+ + +L+ MKE L
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 238 A 238
Sbjct: 365 T 365
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
AY ALI K+N +++ M S ++I L S + A K+ + L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
D Q TYT LI G D+ALK+ M +G+ P + T+N ++ G+ K G V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 480 SDA-EIYRK-EKKSIQADALS 498
A E+ R E K + D +S
Sbjct: 280 DRAFEMVRNLELKGSEPDVIS 300
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 198/471 (42%), Gaps = 27/471 (5%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYTTMLDIFGEAKRISSMK 86
I+ D YT+ ++ + +K F+ + R+ G+ D T++T+++ F R+S
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ + M E D VT +++++ L G V A+ + + M P V+Y + L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ A D++++M +R + + Y+++++ L + G +++AL +F++M+ G++ D
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLW 262
+ LI C G+ +LR M + F + F K+ + +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ +P+ I+ N ++ K+ L + + ++ K +
Sbjct: 341 MITRGIAPDTITYNSLIDG------------------FCKENCLHEANQMFDLMVSKGCE 382
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D S +I C +R D + F L Y L+ + E+
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFS 440
+EM G V +L+ L A +IF + + + Y +I +
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRKEKK 490
A D A ++ ++ KG+ P + T+NV++ GL K G +S+A+ ++RK K+
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 35/212 (16%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D TY +++D F + + +F+LM KG D VTY+ +++ A VD
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ ++ E+ K P ++Y + + ++ A ++++EM+ RG+PP+ TY +L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 179 EYLVRAGKYEEALEIFSKMQEA-----------------------------------GVQ 203
+ L G+ +ALEIF KMQ++ GV+
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKEN 235
PD N++I CK G ++ R MKE+
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 82/155 (52%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY T++ F ++ ++++ K +F+ M +G+ VTY ++ L + G+++
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I+E+M+ I Y + + +V +A ++ + +G+ P+ TY V++
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L + G EA +F KM+E G PD NILI
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG TY +LD + ++ +FE MQ+ + + Y ++H + NA VD
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + K P +V+Y + L + EA ++++M + G P+ +TY +L+
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ ++E+ +M+ G D + ++I+
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/394 (18%), Positives = 152/394 (38%), Gaps = 31/394 (7%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
V+ A++++E M PT + + + + K M G+ + YT T+
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
++ R K A + + + G +PD + L+ C G + ++ M E +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 237 ----LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
L + +V++ + V F P+ ++ + + L++
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 293 DQGLVLILLKKKNL--------VAIDSLL-SGIMD-----------KSIQLDSAVISTII 332
D + ++++N+ + IDSL G D K I+ D S++I
Sbjct: 231 D---LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C+ + D + ++ + + ALI + +K + E+ EM G +
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALK 449
LI A ++F L+ + C TY+ LI Y A D ++
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVS-KGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+++ + KG+ P+ T+N L+ G + G+++ A+
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 178/417 (42%), Gaps = 30/417 (7%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++ ++ + + + M+E GI+ Y S+MH + + + + ++E +
Sbjct: 372 YSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFE--R 429
Query: 129 LKEC--YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
LKEC P+I+SY + + +V +A + KEM G+ N TY++L+ +
Sbjct: 430 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHD 489
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A IF +M +G+QPD+A N+LIE CK G I IL M++ R+ F+
Sbjct: 490 FANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRP 549
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
++ + VA + S L + + + + V V T L+ L++K +
Sbjct: 550 IIEGYAVAGDMKSALDTL------DLMRRSGCVPTVMT--------YNALIHGLVRKHKV 595
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD---LNLERTAY 363
S+L + I + + I+ + AFEY K+ L L+ Y
Sbjct: 596 QRAVSVLDKMSIAGITPNEHTYTIIMR---GYAASGDIGKAFEYFTKIKESGLKLDVYIY 652
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP--VPAAKIFSLL 421
L+ K + EM+ ++ +LI G ARR A + +
Sbjct: 653 ETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILID--GWARRGDVWEAEDLMKQM 710
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
ED TYT+ I AG +A K+ + M G+ P++ T+ L+ G ++
Sbjct: 711 KEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARV 767
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 7/231 (3%)
Query: 7 NVY-KILKYSTWDSAQDLLKNLPIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRG 61
N+Y KI K + S +++ IK ++ T +N + H A+ F + RS G
Sbjct: 447 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHD-FANAFAIFEEMLRS-G 504
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
DR Y +++ F + + + E MQ++ + + ++ + AGD+ A+
Sbjct: 505 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSAL 564
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ + M+ C PT+++Y A + L +V+ A V +M G+ PN +TYT++M
Sbjct: 565 DTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 624
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+G +A E F+K++E+G++ D L+ CCK+G ++ + + R M
Sbjct: 625 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 675
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ +F + S G D + Y T+L ++ R+ S V M + I + Y +
Sbjct: 632 KAFEYFTKIKES-GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 690
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + GDV A ++ ++MK P I +YT+Y+ ++ A V +EM+ GL
Sbjct: 691 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 750
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGET 222
PN TYT L++ R + AL+ F +M+ AG++PD+A+ + L+ G T
Sbjct: 751 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGST 810
Query: 223 RT-IILILRYMKENRLAL 239
T II + R M EN L +
Sbjct: 811 YTGIISVCREMSENDLTV 828
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G H+ TY+ +++ F ++ +FE M G+ D Y ++ G++D
Sbjct: 467 SCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMD 526
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I E+M+ + P+ ++ ++ + +K A D M + G P TY L+
Sbjct: 527 RAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALI 586
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
LVR K + A+ + KM AG+ P++ I++ +G+ +KE+ L
Sbjct: 587 HGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 646
Query: 239 LRYPVFKEALQT 250
L +++ L+
Sbjct: 647 LDVYIYETLLRA 658
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ ++ V + M GI + TYT +M + +GD+ A + ++
Sbjct: 581 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 640
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + Y ++ + R++ A V +EM + +P N + Y +L++ R G
Sbjct: 641 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 700
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
EA ++ +M+E GV P+ I CCKAG+
Sbjct: 701 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGD 734
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 97/487 (19%), Positives = 204/487 (41%), Gaps = 55/487 (11%)
Query: 54 NWVSRSRGFNH----DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMH 109
NW + F R + M+ + + + FE M+ +GI +A +TS++H
Sbjct: 248 NWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVH 307
Query: 110 WLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
+ A D+ GA++ EEMK + TIV+Y+ + + + A +++KE +
Sbjct: 308 AYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSL 367
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP----------------DKAACNILI 213
N Y+ ++ ++G E A E+ +M+E G+ ++ C ++
Sbjct: 368 NGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVF 427
Query: 214 EKCCKAGETRTII----LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
E+ + G +II L+ Y+K ++A + KE +++ + N + ++
Sbjct: 428 ERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKE-MESCGIKHNNKTYSMLINGFIH 486
Query: 270 PEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
++ A+ E + + ++ +I L+ K N+ +L + + +Q +
Sbjct: 487 LHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA 546
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMD-LNLERTA--------YLALIGILIKLNTFPK 378
IIE G +A + +D L+L R + Y ALI L++ + +
Sbjct: 547 FRPIIE---------GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 597
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIG 436
++++M+ AG + + +++ ++ A + F+ + E + Y L+
Sbjct: 598 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 657
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADA 496
+G AL + + M + I + +N+L+ G + G V +AE K+ K
Sbjct: 658 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK------ 711
Query: 497 LSKDAVP 503
+D VP
Sbjct: 712 --EDGVP 716
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 187/469 (39%), Gaps = 38/469 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG + TY ++ + I +F+ M++KGI + Y S+++ G +D
Sbjct: 366 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 425
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + M + PT SY+ + L N + ++++EM +RG+ N YT+T L+
Sbjct: 426 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 485
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ K +EA +F KM ++ V P++ N++IE C G R + M E L
Sbjct: 486 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 545
Query: 239 LRYPVFKEALQ----TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
++ + T V+ N EF++D + V +
Sbjct: 546 PDNYTYRSLISGLCLTSGVSKAN-------------EFVADLENSYAVLNNFS-----LT 587
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ ++ L + + ++LD + I+ ++ + + F +
Sbjct: 588 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 647
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR------LGSA 408
+ + Y +I L K + ++M G+S +LI+ LGSA
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
++LP TY + + + G +KA ++ M +G S+ +FN+
Sbjct: 708 ELLCKEMLAGNVLPNK----FTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 762
Query: 469 LLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
L+ GL K G++ +A ++ K I S D + I +L GD
Sbjct: 763 LIKGLCKAGKIQEAIDLMSK----ITESGFSPDCISYSTIIHELCKMGD 807
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 188/479 (39%), Gaps = 59/479 (12%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+S S G +++T + +L + ++ + + +F+ M + G+++D YT+ + +
Sbjct: 153 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 212
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++DGA + M+ + + V Y M L N RV+EA +V M+ G+ + TY
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 272
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK-------------CCKAGET 222
L+ R + E AL I M G P +A C+ +I++ CK G+
Sbjct: 273 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 332
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ + Y + F +A + FK E
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFK---------------------------EMA 365
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+E P + +++ L K+ ++ L + DK I++ +++I C
Sbjct: 366 GRGLE-PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D A VK L +Y LI L + E+ EM + G + Y L
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 484
Query: 402 IHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
I+ ++ AA++F +++P + T+ +I Y G+ KA ++Y M
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNE----VTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
G+ P T+ L++GL VS A AD + AV + LLYG
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKA-------NEFVADLENSYAVLNNFSLTALLYG 592
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 14 YSTWDSAQDLLKNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
Y WD ++ + + S+T V LK H EK+ + F + + +G D YT
Sbjct: 603 YHLWDEMA--VRGVKLDLVSFTIIVYAALKQHDK-EKSCVLFREM-KEQGVKPDDIFYTC 658
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
M+D + + + ++ M G + + VT+T +++ L +G + A + +EM
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P +Y ++ +++A D++ M+Q G + ++ +L++ L +AGK +EA+
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAI 777
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ SK+ E+G PD + + +I + CK G+
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGD 807
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G++ + T+T +++ ++ + S + + + M + + TY + + + GD++ A
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M L+ +IVS+ +K L +++EA D+ ++ + G P+C +Y+ ++
Sbjct: 743 KDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHE 801
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L + G +A E++++M G++PD A NI I C GE+
Sbjct: 802 LCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGES 843
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 182/444 (40%), Gaps = 34/444 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + +T+T +++ F + K++ +F+ M + + + VT+ ++ G++
Sbjct: 472 RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRK 531
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++++M P +Y + + L L V +A + ++ N ++ T L+
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
R G++ E ++ +M GV+ D + I++ K + ++ R MKE +
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Query: 239 --LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y +AL +EN I + + + D P ++ +
Sbjct: 652 DDIFYTCMIDALSK----EEN--------------MIQALNCWDQMVVDGYSPNTVTHTV 693
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC--DHRRRDGALLAFE--YSV 352
++ L K + LL M L V+ NC D+ +G + + +S
Sbjct: 694 LINNLCKSGYLGSAELLCKEM-----LAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSA 748
Query: 353 KMDLNLER-TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
+ +L ++ LI L K + +++ ++T++G S + +IH L
Sbjct: 749 MLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808
Query: 412 VPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A ++++ L + Y I G +DKAL IY M R G+ P+ T+ L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868
Query: 470 LAGLEKLGRVSDAEIYRKEKKSIQ 493
L+G+ + D +R K+ IQ
Sbjct: 869 LSGISLMLHY-DFSCFRGTKQYIQ 891
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 154/398 (38%), Gaps = 63/398 (15%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P + +Y A + L N+R +A ++KEM RGL PN TY +L+ L + G E+AL +
Sbjct: 336 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 395
Query: 194 FSKMQEAGVQ-----------------------------------PDKAACNILIEKCCK 218
F KM++ G++ P A+ + LI C+
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQ-VHPQFSPEFIS 274
G+ + + + R M E +A F + F K DE L + + P ++
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Query: 275 DNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
N +E + +I + +V + LK N SL+SG+ L S V S
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT-YRSLISGLC-----LTSGV-SKAN 568
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
E D L Y+V + +L AL+ + F + + +EM G
Sbjct: 569 EFVAD--------LENSYAVLNNFSLT-----ALLYGFFREGRFTETYHLWDEMAVRGVK 615
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKI 450
L + ++++ + +F + E + YT +I + +AL
Sbjct: 616 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 675
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ M G P+ T VL+ L K G + AE+ KE
Sbjct: 676 WDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 713
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 6/194 (3%)
Query: 29 IKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
I W++YT +N K E A LF + + N T+ M++ + I
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE--VTFNVMIEGYCLVGNIRK 531
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+++ M E G+ D TY S++ L V A +++ S TA +
Sbjct: 532 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 591
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
F R E ++ EM RG+ + ++T+++ ++ E++ +F +M+E GV+P
Sbjct: 592 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 651
Query: 205 DKAACNILIEKCCK 218
D +I+ K
Sbjct: 652 DDIFYTCMIDALSK 665
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 120/545 (22%), Positives = 209/545 (38%), Gaps = 82/545 (15%)
Query: 11 ILKYSTWDSAQDLLKNL--------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
+LK D+A L+ + P+ +D + V+ MEKA F+ + + G
Sbjct: 325 LLKGRNADAANGLVHEMVSHGFSIDPMMYDYFIC--VMSKEGAMEKAKALFDGMI-TFGV 381
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
Y ++++ F K + + ++++ I I TY + + + ++GD+DGA N
Sbjct: 382 TPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYN 441
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK---------------------- 160
I +EM C P +V YT +K R +A V K
Sbjct: 442 IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLS 501
Query: 161 -------------EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
EM++ G P+ +TY + + AG++ A + +M E GV P+K
Sbjct: 502 KAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKV 561
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEAL-QTFKVADENDSLLWQ 263
C LI + CK G+ R M E + A Y V L + KV D +
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621
Query: 264 VHPQFSPEFISDNDAVEFVTT--DIEGPLSIDQGLVLILLKKKNLVAIDSLL-----SGI 316
+P+ S ++ + +++ SI +V L N++ + LL SG
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL-TSNVIIYNMLLGGFCRSGE 680
Query: 317 MDKSIQL-----------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
++K+ +L ++ TII+ C A F+ L + Y
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT 740
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL---- 421
L+ +LN + I E K S AL+ + + I L+
Sbjct: 741 LVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSF 800
Query: 422 -----PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
P D TY +I G+ + A +++ M + + P++ T+ LL G +K+
Sbjct: 801 DKFGKPND----VTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKM 856
Query: 477 GRVSD 481
GR S+
Sbjct: 857 GRRSE 861
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 185/484 (38%), Gaps = 64/484 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G R +Y ++D + KR+ K + M G+ D V Y+ ++ L + D
Sbjct: 274 KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADA 333
Query: 120 AVNIWEEM--------------------------KLKECY---------PTIVSYTAYMK 144
A + EM K K + P +Y + ++
Sbjct: 334 ANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIE 393
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
F V++ ++ E+ +R + + YTY ++ + +G + A I +M +G +P
Sbjct: 394 GFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRP 453
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLL 261
+ LI+ + + +L+ M+E +A Y L K DE S L
Sbjct: 454 NVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFL 513
Query: 262 WQ-VHPQFSPE------FISDN-DAVEFVTTD------IEGPLSIDQ----GLVLILLKK 303
+ V F P+ FIS +A EF + D +E + ++ GL+ KK
Sbjct: 514 LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
++ S ++++ I D+ + ++ + + + A F + + +Y
Sbjct: 574 GKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSY 633
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI KL K + I +EM +AG + V + +L LG R K LL E
Sbjct: 634 GTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNML---LGGFCRSGEIEKAKELLDE 690
Query: 424 DQK-----CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
TY +I Y +G +A +++ M KG+ P + L+ G +L
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND 750
Query: 479 VSDA 482
V A
Sbjct: 751 VERA 754
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D F YTT++D + +FE EKG + + ++++W+ G +
Sbjct: 729 KGLVPDSFVYTTLVDGCCRLNDVERAITIFE-TNEKGCASSSAPFNALINWVFKFGKTEL 787
Query: 120 AVNIWEEMKL----KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++ + K P V+Y + L ++ A +++ M + L P TYT
Sbjct: 788 TTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYT 847
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L+ + G+ E +F ++ AG++PD +++I K G T +++L M
Sbjct: 848 SLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 173/477 (36%), Gaps = 89/477 (18%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+LD + R+ V++ M E+ + D +Y L A DG V + +++ LK
Sbjct: 195 LLDALLKRNRLDLFWDVYKGMVERNVVFDVQSY----EMLIGAHCRDGNVQLAKDVLLKT 250
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+ LN V EA ++ K M +GL P+ +Y +L++ L + + E+A
Sbjct: 251 --------EEELGTATLN--VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAK 300
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+ +M G+ D A +ILI+ K + A
Sbjct: 301 SLLVEMNSVGLFADNVAYSILIDGLLKG-------------------------RNADAAN 335
Query: 252 KVADENDSLLWQVHPQFSPEFI---SDNDAVEFVTTDIEGPLSID--------QGLVLIL 300
+ E S + + P FI S A+E +G ++ L+
Sbjct: 336 GLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGF 395
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
++KN+ LL I ++I + T ++ C DGA +
Sbjct: 396 FREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNV 455
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI ++ + F +++EM + G + + LI L A++ A
Sbjct: 456 VIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLE 515
Query: 421 LPED--QKCTATYTALIGVYFSAG---SADK----------------------------- 446
+ E+ + TY A I Y AG SADK
Sbjct: 516 MVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGK 575
Query: 447 ---ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
A +++M +GI T+ VL+ GL K G+V+DAE + K I D S
Sbjct: 576 VIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFS 632
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
VTY ++ +L G+++ A ++ M+ PT+++YT+ + R E V+ E
Sbjct: 809 VTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDE 868
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM-----QEAGVQPDKAACNILIEKC 216
+I G+ P+ Y+V++ ++ G +AL + +M + G + + C L+
Sbjct: 869 VIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGF 928
Query: 217 CKAGETRTIILILRYMKENRLALRY 241
K GE + + EN + L+Y
Sbjct: 929 AKVGEME----VAEKVVENMVRLKY 949
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 146/396 (36%), Gaps = 22/396 (5%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M KG+ +Y ++ L ++ A ++ EM + V+Y+ + L
Sbjct: 271 MSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRN 330
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
A + EM+ G + Y + + + G E+A +F M GV P A
Sbjct: 331 ADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYAS 390
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
LIE + R +L +K+ + + + A++ + + D
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDG------------ 438
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ N E + + I L+ L+K +L + ++ I D+ +++
Sbjct: 439 --AYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSL 496
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I ++ D A V+ + Y A I I+ F + V+EM + G
Sbjct: 497 IIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGV 556
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADK 446
L LI+ + + A F + E D K TYT L+ G +
Sbjct: 557 IPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAK---TYTVLMNGLVKNGKVND 613
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A +I+ M KGI P + ++ L+ G KLG + A
Sbjct: 614 AEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA 649
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 162/400 (40%), Gaps = 25/400 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y+T++ + RI + + + M G+ D Y +++ LS AG ++ A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
E++ + P V++ A++ ++ EA + EM+ GL PN YTVL+
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AG EAL IF + GV PD C+ I K G + + + +KE L
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F E + +++H + + I+ N + I LV L
Sbjct: 360 VFTYSSLISGFCKQGEVEK-AFELHDEMCLKGIAPN-------------IFIYNALVDGL 405
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K ++ L G+ +K ++ DS ST+I+ C A F +
Sbjct: 406 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 465
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-- 418
Y AL+ K K + EM + G + + L+ S + A+++F
Sbjct: 466 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQ-EASQLFQE 524
Query: 419 ----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
++P+ TYT +I + AG ++A ++K M
Sbjct: 525 MIAKQIMPDH----VTYTTVIDWHCKAGKMEEANLLFKEM 560
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 179/408 (43%), Gaps = 22/408 (5%)
Query: 21 QDLLKNLPIKWDSYTV--NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
L+ N P+ YTV N K ME +F + + G D T + + +
Sbjct: 284 HGLMPNNPL----YTVLINGHFKAGNLMEALSIFRHL--HALGVLPDVQTCSAFIHGLLK 337
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
R+ VF ++EKG+ D TY+S++ G+V+ A + +EM LK P I
Sbjct: 338 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 397
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y A + L + ++ A ++ M ++GL P+ TY+ +++ ++ EA +F +M
Sbjct: 398 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA--LRYPVFKEA-LQTFKVAD 255
GVQP N L+ CCK G+ + + R M + A L + + ++ K+ +
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQE 517
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLL 313
+ + Q P+ ++ +++ G + + L+ ++++NL+ + +L
Sbjct: 518 ASQLFQEMIAKQIMPDHVTYTTVIDWHCK--AGKME-EANLLFKEMQERNLIVDTVFALF 574
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS---VKMDLNLERTAYLALIGIL 370
++ K ++ D +I +C + D + AF+ V + + T + LI L
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHC---KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 631
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
K + +++++EM + G + + L+ A + A ++F
Sbjct: 632 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF 679
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 151/324 (46%), Gaps = 38/324 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A F+ + +G D TY+TM+D + +++ ++ +F M KG+ + Y
Sbjct: 411 IQRARKLFDGMPE-KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYN 469
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H GD++ A+N++ EM L++ + T +S+ + + +++EA+ +++EMI +
Sbjct: 470 ALVHGCCKEGDMEKAMNLFREM-LQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAK 528
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK--AACNILIEKCCKAGETR 223
+ P+ TYT ++++ +AGK EEA +F +MQE + D A ++ K K E
Sbjct: 529 QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVT 588
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
++I + KE+ L ++ FK+ DE V
Sbjct: 589 YGLVIYAHCKEDNL----------VEAFKLRDE------------------------VVG 614
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ +I L+ L K+++L LL + + ++ A ST++ + + D
Sbjct: 615 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 674
Query: 344 ALLAFEYSVKMDLNLERTAYLALI 367
A FE + L + T + L+
Sbjct: 675 ATRVFEGVKSLGLVPDTTTLIDLV 698
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 173/448 (38%), Gaps = 25/448 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +TYT + AKR++ K FE MQ+ G+ D ++++ GD+D
Sbjct: 4 KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 63
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ I + M +++Y + L ++++A ++ K MI G PN T+ +L+E
Sbjct: 64 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 123
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R ALE+ +M++ + P + +I C + +L M + L
Sbjct: 124 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 183
Query: 240 RYPVFKEALQTFKVA---DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
V+ + + +E LL D + V DI +
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLL-------------DGMSCSGVAPDI----FCYNAI 226
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ L K + + L I + ++ D+ I + A F+ + L
Sbjct: 227 ISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGL 286
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
Y LI K + I + G V + IH L R A K
Sbjct: 287 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 346
Query: 417 IFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+FS L E TY++LI + G +KA +++ MC KGI P++ +N L+ GL
Sbjct: 347 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 406
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAV 502
K G + A RK + L D+V
Sbjct: 407 KSGDIQRA---RKLFDGMPEKGLEPDSV 431
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME+A + + + RG D T+ + + + +++ F+ M + G+ + YT
Sbjct: 236 MEEASTYLLEI-QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 294
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ AG++ A++I+ + P + + +A++ L N RV+EA V+ E+ ++
Sbjct: 295 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 354
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ +TY+ L+ + G+ E+A E+ +M G+ P+ N L++ CK+G+ +
Sbjct: 355 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 414
Query: 226 ILILRYMKENRL 237
+ M E L
Sbjct: 415 RKLFDGMPEKGL 426
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 174/460 (37%), Gaps = 53/460 (11%)
Query: 26 NLPIKWDSYTV-NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
+PI +Y V L MEKA + + G + T+ +++ + +
Sbjct: 75 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIEGYCREHNMGR 133
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+ + M+++ + AV+Y ++++ L + D+ A + E+M P +V Y+ +
Sbjct: 134 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIM 193
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
R++EA + M G+ P+ + Y ++ L +AGK EEA ++Q G++P
Sbjct: 194 GYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKP 253
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV 264
D IL Y K ++ F E L D L
Sbjct: 254 DAVTFG---------------AFILGYSKTGKMTEAAKYFDEML---------DHGLMPN 289
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+P + T I G K NL+ S+ + + D
Sbjct: 290 NPLY--------------TVLINGH-----------FKAGNLMEALSIFRHLHALGVLPD 324
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S I + R AL F + L + Y +LI K K E+ +
Sbjct: 325 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 384
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
EM G + +++ L+ L + A K+F +PE + + TY+ +I Y +
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ +A ++ M KG+ P +N L+ G K G + A
Sbjct: 445 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKA 484
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 129/333 (38%), Gaps = 59/333 (17%)
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M ++GL PN YTYT++ L RA + EA F +MQ+ G++PD AC+ LI+ + G+
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
++ I M +S +
Sbjct: 61 IDEVLRIKDVM----------------------------------------VSCGIPINL 80
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+T ++ L+ L K + +L G++ + +S +IE C
Sbjct: 81 ITYNV---------LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNM 131
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
AL + K +L +Y A+I L +++E+MT +G V + + L
Sbjct: 132 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 191
Query: 402 I------HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
I R+ ARR + + P D C Y A+I AG ++A +
Sbjct: 192 IMGYASEGRIEEARRLLDGMSCSGVAP-DIFC---YNAIISCLSKAGKMEEASTYLLEIQ 247
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+G+ P TF + G K G++++A Y E
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 280
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 157/396 (39%), Gaps = 48/396 (12%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F+ M + GI DA TY ++HWL + A+N+WE+M P IV+Y + +
Sbjct: 374 LFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+N + EA +Y EM +G PN TYT LM+ + +++A + ++M++ GV +
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
N LI C G + +L+ + + + F A S + V+ Q
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS-AFAVYQQ 551
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+ I N + T+ I+G + LK +L+ + K ++ D A
Sbjct: 552 MCAKGIPPN--IVTYTSFIDG--YCKTSCCDLALK---------MLNDVRCKGLRPDIAA 598
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++I C AL +K L + Y + I L + + E+M
Sbjct: 599 YNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMI 658
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
K G L TATYT LI + G+ A
Sbjct: 659 KEGIDLD---------------------------------TATYTTLIDGFSKDGNVTFA 685
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LK+Y M KG P TF L GL + G + DA
Sbjct: 686 LKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 171/431 (39%), Gaps = 35/431 (8%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY ++ + ++I ++E M E G+ VTY S++ G +D AV ++
Sbjct: 385 DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLY 444
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM K P +V+YT MK +A + EM Q G+ N YTY L+ L
Sbjct: 445 TEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVV 504
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRY 241
G+ E E+ + + G P N +I KAG + + + M + + Y
Sbjct: 505 GRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTY 564
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
F + D +L V + P+ + N + EG +S +++++
Sbjct: 565 TSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQ--EGNMSHALQVLVLM 622
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
LK D LL I +V ++ I + + + AL +E +K ++L+
Sbjct: 623 LK-------DGLLPNI---------SVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDT 666
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL------GSARRPVPA 414
Y LI K ++ EM G+ L H L AR+ +
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ P Y LI Y G +A +++ M + I P T+++L+ G++
Sbjct: 727 MNRLDIRPN----VLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV-GMK 781
Query: 475 KLGRVS--DAE 483
LG S DAE
Sbjct: 782 SLGSDSPIDAE 792
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 190/447 (42%), Gaps = 52/447 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF FT+ +++D+ + R+ ++ + + G + V T++MH +V A
Sbjct: 242 GFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKA 301
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++I+EE PT V+YT ++ ++A ++ ++M GL P+ + ++++
Sbjct: 302 LDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG 361
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L+ +++A+ +F +M ++G+ PD NILI C+ + R + + M E +
Sbjct: 362 LLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420
Query: 241 YPVFKEALQTFKV---ADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPL---SID 293
+ L + V DE L ++ + F+P ++ TT ++G + + D
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVT-------YTTLMKGHINKAAFD 473
Query: 294 QGLVLILLKKKNLVAI-----DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA- 347
+ L+ K+N V+ ++L++G+ V+ + EV G +L
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGL---------CVVGRVCEV--------GEMLKR 516
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
FE + + Y ++I IK + ++M G + I
Sbjct: 517 FETEGFVPTAM---TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573
Query: 408 ARRPVPAAKIFSLLPEDQKC------TATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
A K+ + D +C A Y +LI + G+ AL++ M + G+ P
Sbjct: 574 TSCCDLALKMLN----DVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLP 629
Query: 462 SLGTFNVLLAGLEKLGRVSDA-EIYRK 487
++ +N + G + L + +A +Y K
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRLYEK 656
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME+A + + + G + D TYTT++D F + ++ ++ M KG D +T+T
Sbjct: 647 MEEALRLYEKMIKE-GIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFT 705
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ H L GD+D A + +EM + P ++ Y + N +++EA ++ EM++R
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765
Query: 166 GLPPNCYTYTVLM 178
+ P+ TY +L+
Sbjct: 766 KIMPDDTTYDILV 778
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ GF TY ++++ F +A + S V++ M KGI + VTYTS + D
Sbjct: 519 TEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD 578
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +++ K P I +Y + + + A V M++ GL PN Y +
Sbjct: 579 LALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
EEAL ++ KM + G+ D A LI+ K G
Sbjct: 639 TGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDG 680
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 165/452 (36%), Gaps = 54/452 (11%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D + T +L + + + + M+ KG +DA + VM G D
Sbjct: 135 ARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYD 194
Query: 119 GAVNIWEEMKLKECYP-TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV +++EM E P V A + L D A V ++M G P +T+ +
Sbjct: 195 DAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD-ANRALLVLRKMQDAGFVPWDFTFNSV 253
Query: 178 MEYLVRAGKYEE-----------------------------------ALEIFSKMQEAGV 202
++ LV+ G+ EE AL+IF + G+
Sbjct: 254 VDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGL 313
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
P +LI C + G + R M+++ L F ++ ND LW
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL----NDK-LW 368
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ E ++D+ + T +I L+ L +++ + +L + + ++
Sbjct: 369 KDAVSLFKE-MADSGIPDAFTYNI---------LIHWLCQRRKIREALNLWEKMNETGVK 418
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+++ C + D A+ + Y L+ I F K +
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYAL 478
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFS 440
+ EM + G S Y LI+ L R ++ + TY ++I +
Sbjct: 479 LAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIK 538
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
AG A +Y+ MC KGI P++ T+ + G
Sbjct: 539 AGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 7/202 (3%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A L +P K + T ++K H +KA+ + + G + + +TY T
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEM-KQNGVSCNDYTYNT 496
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+++ R+ + + + + +G A+TY S+++ AG + A ++++M K
Sbjct: 497 LINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P IV+YT+++ A + ++ +GL P+ Y L+ + G AL
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHAL 616
Query: 192 EIFSKMQEAGVQPDKAACNILI 213
++ M + G+ P+ + N I
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFI 638
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D Y +++ F + +S V LM + G+ + Y S + N +
Sbjct: 588 RCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ ++E+M + +YT + + V A +Y EM+ +G P+ T+T L
Sbjct: 648 EEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L R G ++A ++ +M ++P+ N+LI + G+ + + M E ++
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 10/159 (6%)
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I+ D V S I C R + ALL + +++ +L+K +
Sbjct: 208 IEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEAL 267
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTAL 434
I +E+ G + V L L+H R A IF L+P D TYT L
Sbjct: 268 HIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTD----VTYTVL 323
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
I G +KA ++ + M G+ PS FN+++ GL
Sbjct: 324 IRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 193/467 (41%), Gaps = 46/467 (9%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A FF ++ S F H T+ M+ ++ S++Y+ + M+ +G + + SV+
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
G + AV ++ +K C P++ Y + L +R++ VY++M + G
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN +TY VL++ L + K + A ++ +M G PD + +I C+ G
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG-------- 230
Query: 229 LRYMKENR-LALRY-PVFK--EALQTFKVADENDS------LLWQVHPQFSPEFISDNDA 278
+KE R LA R+ PV AL + E+D + V SP IS +
Sbjct: 231 --LVKEGRELAERFEPVVSVYNALIN-GLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKK---KNLVAIDSLLSGIMDKSIQLDS---------- 325
+ + G + + + +LK+ N+ + SL+ G + D+
Sbjct: 288 INVLCNS--GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 326 -------AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+T+++ C H A+ F + ++ + Y +LI K +
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALIG 436
I +M +G V + ++ L + A + ++ ++ + T+ A I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 437 VYFSAGSADKALKIYKTMCRKG-IHPSLGTFNVLLAGLEKLGRVSDA 482
AG D A K+++ M ++ P++ T+N LL GL K R+ +A
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
YT M++ + + + E+M ++ T+ + + L +AG +D A ++ +M
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 128 KLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ + C P IV+Y + L +R++EA + +E+ RG+ + TY L+ AG
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
AL++ KM G PD+ N++I CK G+
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +LD +A RI + + +G+ + TY +++H NAG A+ + +M
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYK--EMIQRGLPPNCYTYTVLMEYLVRAG 185
+ P ++ + + + A + +R P+ +YT ++ L R+
Sbjct: 555 MVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSN 614
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILI 213
E+ + + +M AG+ P A ++LI
Sbjct: 615 CREDGVILLERMISAGIVPSIATWSVLI 642
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ +LD F + ++ K +FE M I+ D VTY+S+++ L +D A +++ M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C +VSY + RV++ +++EM QRGL N TY L++ +AG
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++A E FS+M G+ PD NIL+ C GE ++I M++ + L
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ KY S ++ L I+ D YT N V+ + L + + + G+
Sbjct: 92 LSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGY 151
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
DR T ++++ F R+S + + M E G D V Y +++ L V+ A +
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++E++ K P +V+YTA + L + R +A + +MI++ + PN TY+ L++ V
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ GK EA E+F +M + PD + LI C
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D Y ++D + KR++ F+ ++ KGI + VTYT++++ L N+ A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M K+ P +++Y+A + N +V EA ++++EM++ + P+ TY+ L+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + +EA ++F M G D + N LI CKA + + R M + L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 241 YPVFKEALQTFKVADEND 258
+ +Q F A + D
Sbjct: 365 TVTYNTLIQGFFQAGDVD 382
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F+ + S+G D +Y T+++ F +AKR+ +F M ++G+ + V
Sbjct: 308 HDRIDEANQMFDLMV-SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +++ AGDVD A + +M P I +Y + L N +++A ++++M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+R + + TYT ++ + + GK EEA +F + G++PD ++ C G
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 223 RTIILILRYMKENRL 237
+ + MK+ L
Sbjct: 487 HEVEALYTKMKQEGL 501
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 9/214 (4%)
Query: 15 STWDSAQDLLKNLPIKWDSYTV-------NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRF 67
S W A LL ++ K + V + +K +E LF V S + D
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS--IDPDIV 296
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+++++ RI +F+LM KG D V+Y ++++ A V+ + ++ EM
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ V+Y ++ F V +A + + +M G+ P+ +TY +L+ L G+
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
E+AL IF MQ+ + D +I CK G+
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/433 (20%), Positives = 172/433 (39%), Gaps = 52/433 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +D +T+ +++ F ++S + M + G D VT S+++ V A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V++ ++M P IV+Y A + L RV +A D +KE+ ++G+ PN TYT L+
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + ++ +A + S M + + P+ + L++ ++K ++
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA---------------FVKNGKVLEA 279
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+F+E V P+ ++ + S+ GL L
Sbjct: 280 KELFEE----------------MVRMSIDPDIVTYS--------------SLINGLCL-- 307
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+ + + ++ K D +T+I C +R + + F + L
Sbjct: 308 --HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI + K E +M G S ++ +L+ L A IF
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 421 LPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ + + TYT +I G ++A ++ ++ KG+ P + T+ +++GL G
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 479 VSDAE-IYRKEKK 490
+ + E +Y K K+
Sbjct: 486 LHEVEALYTKMKQ 498
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 150/385 (38%), Gaps = 24/385 (6%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ A++++ +M +P+IV + + + + + K+M G+ + YT+ +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE-- 234
++ + AL I KM + G +PD+ L+ C+ + ++ M E
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 235 --NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ + +T +V D D P ++ T + G
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT-------YTALVNG---- 234
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L LLS ++ K I + S +++ + + A FE V
Sbjct: 235 -------LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+M ++ + Y +LI L + + ++ + M G V LI+ A+R
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 413 PAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
K+F + + T TY LI +F AG DKA + + M GI P + T+N+LL
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 471 AGLEKLGRVSDAEIYRKEKKSIQAD 495
GL G + A + ++ + + D
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMD 432
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FF+ + G + D +TY +L + + +FE MQ++ +++D VTYT
Sbjct: 381 VDKAQEFFSQMDFF-GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+V+ + G V+ A +++ + LK P IV+YT M L + E +Y +M Q
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
GL N T + G + E+ KM G P
Sbjct: 500 GLMKNDCTLS--------DGDITLSAELIKKMLSCGYAP 530
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 2/225 (0%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMK 86
I+ D+YT + ++ + W R S G D TY +++D++G R++
Sbjct: 174 IQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAV 233
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
++E ++ +D VTY ++ + + AGD + + +EM+ P V M L
Sbjct: 234 ELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTL 293
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+V +A V+ EM G+ P T ++L+E R G Y++A E++ ++ G + D
Sbjct: 294 SKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDV 353
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
A N L++ C + G IL+ MK + ++ A+ T+
Sbjct: 354 AVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTY 398
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +T++T+++ ++ FE M+ +GI D VTY SV+ G V+
Sbjct: 172 RGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNE 231
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV ++E++K V+Y A + + + +EM G PN LM
Sbjct: 232 AVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMG 291
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L +AGK +A ++F++M+ +GV P +IL+E + G
Sbjct: 292 TLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVG 332
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 47 EKAWLFFNWV-SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
EKA FF W+ +R + +R+TY ML I +++ + + E M +GI D T++
Sbjct: 123 EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFS 182
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ + A+ +E MK + P V+Y + + + RV EA ++Y+++
Sbjct: 183 TLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSV 242
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ TY + RAG Y+ +++ +M+++G P+ N L+ KAG+
Sbjct: 243 NWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQA 302
Query: 226 ILILRYMK 233
+ M+
Sbjct: 303 KKVFNEMR 310
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + + T++ +A +++ K VF M+ G++ VT + ++ + G
Sbjct: 275 RDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAY 334
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++E +K + + Y + MK RV++A D+ KEM + G P+ TY
Sbjct: 335 DQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTA 394
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
M G + A +F K+ +PD ++I C AGE I M E+
Sbjct: 395 MNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMES 452
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G + T + +++++ V+E ++ +G D Y S+M G V
Sbjct: 310 RTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRV 369
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A +I +EMK C P ++Y M V A ++ +++ P+ +TV+
Sbjct: 370 EQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVM 429
Query: 178 MEYLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILI 213
+ AG+ E+A +IF +M E+G PD+ +L+
Sbjct: 430 IRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLL 466
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ I D +++I++ R + A+ +E ++ L+ Y A+ + + +
Sbjct: 207 EGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQS 266
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIG 436
+ ++V+EM +G S + L+ L A + A K+F+ + T + L+
Sbjct: 267 IIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVE 326
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
+Y G+ D+A ++Y+T+ +G + +N L+ + GRV AE KE K
Sbjct: 327 MYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMK 380
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 178/417 (42%), Gaps = 30/417 (7%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+ ++ ++ + + + M+E GI+ Y S+MH + + + + ++E +
Sbjct: 350 YSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFE--R 407
Query: 129 LKEC--YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
LKEC P+I+SY + + +V +A + KEM G+ N TY++L+ +
Sbjct: 408 LKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHD 467
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A IF +M +G+QPD+A N+LIE CK G I IL M++ R+ F+
Sbjct: 468 FANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRP 527
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
++ + VA + S L + + + + V V T L+ L++K +
Sbjct: 528 IIEGYAVAGDMKSALDTL------DLMRRSGCVPTVMT--------YNALIHGLVRKHKV 573
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD---LNLERTAY 363
S+L + I + + I+ + AFEY K+ L L+ Y
Sbjct: 574 QRAVSVLDKMSIAGITPNEHTYTIIMR---GYAASGDIGKAFEYFTKIKESGLKLDVYIY 630
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP--VPAAKIFSLL 421
L+ K + EM+ ++ +LI G ARR A + +
Sbjct: 631 ETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILID--GWARRGDVWEAEDLMKQM 688
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
ED TYT+ I AG +A K+ + M G+ P++ T+ L+ G ++
Sbjct: 689 KEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARV 745
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 2/200 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +N + H A+ F + RS G DR Y +++ F + + + E M
Sbjct: 456 SMLINGFIHLHD-FANAFAIFEEMLRS-GLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 513
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
Q++ + + ++ + AGD+ A++ + M+ C PT+++Y A + L +V
Sbjct: 514 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKV 573
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+ A V +M G+ PN +TYT++M +G +A E F+K++E+G++ D L
Sbjct: 574 QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETL 633
Query: 213 IEKCCKAGETRTIILILRYM 232
+ CCK+G ++ + + R M
Sbjct: 634 LRACCKSGRMQSALAVTREM 653
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ +F + S G D + Y T+L ++ R+ S V M + I + Y +
Sbjct: 610 KAFEYFTKIKES-GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 668
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + GDV A ++ ++MK P I +YT+Y+ ++ A V +EM+ GL
Sbjct: 669 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 728
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGET 222
PN TYT L++ R + AL+ F +M+ AG++PD+A+ + L+ G T
Sbjct: 729 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGST 788
Query: 223 RT-IILILRYMKENRLAL 239
T II + R M EN L +
Sbjct: 789 YTGIISVCREMSENDLTV 806
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G H+ TY+ +++ F ++ +FE M G+ D Y ++ G++D
Sbjct: 445 SCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMD 504
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I E+M+ + P+ ++ ++ + +K A D M + G P TY L+
Sbjct: 505 RAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALI 564
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
LVR K + A+ + KM AG+ P++ I++ +G+ +KE+ L
Sbjct: 565 HGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 624
Query: 239 LRYPVFKEALQT 250
L +++ L+
Sbjct: 625 LDVYIYETLLRA 636
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY ++ ++ V + M GI + TYT +M + +GD+ A + +
Sbjct: 558 MTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK 617
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+K + Y ++ + R++ A V +EM + +P N + Y +L++ R G
Sbjct: 618 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 677
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
EA ++ +M+E GV P+ I CCKAG+
Sbjct: 678 VWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGD 712
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 194/451 (43%), Gaps = 51/451 (11%)
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ FE M+ +GI +A +TS++H + A D+ GA++ EEMK + TIV+Y+ +
Sbjct: 262 RATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISG 321
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP- 204
+ + A +++KE + N Y+ ++ ++G E A E+ +M+E G+
Sbjct: 322 FAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAP 381
Query: 205 ---------------DKAACNILIEKCCKAGETRTII----LILRYMKENRLALRYPVFK 245
++ C ++ E+ + G +II L+ Y+K ++A + K
Sbjct: 382 IDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISK 441
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKK 303
E +++ + N + ++ ++ A+ E + + ++ +I L+ K
Sbjct: 442 E-MESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKM 500
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD-LNLERTA 362
N+ +L + + +Q + IIE G +A + +D L+L R +
Sbjct: 501 GNMDRAICILEKMQKERMQPSNRAFRPIIE---------GYAVAGDMKSALDTLDLMRRS 551
Query: 363 --------YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
Y ALI L++ + + ++++M+ AG + + +++ ++ A
Sbjct: 552 GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKA 611
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ F+ + E + Y L+ +G AL + + M + I + +N+L+ G
Sbjct: 612 FEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG 671
Query: 473 LEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
+ G V +AE K+ K +D VP
Sbjct: 672 WARRGDVWEAEDLMKQMK--------EDGVP 694
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 79/437 (18%), Positives = 165/437 (37%), Gaps = 71/437 (16%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF +Y +L+++ + +++ + + M+ GI + TY+ +++ + D A
Sbjct: 412 GFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANA 471
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
I+E EM++ GL P+ Y +L+E
Sbjct: 472 FAIFE-----------------------------------EMLRSGLQPDRAIYNLLIEA 496
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G + A+ I KMQ+ +QP A +IE AG+ ++ + L M+ +
Sbjct: 497 FCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPT 556
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + L + H + D ++ +T + I +G
Sbjct: 557 VMTYNALIHG----------LVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYA--- 603
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
++ + I + ++LD + T++ C R AL +V +++ ++
Sbjct: 604 -ASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSAL-----AVTREMSFQK 657
Query: 361 TA-----YLALIGILIKLNTFPKVAEIVEEMTKAG-----HSLGVYLGALLIHRLGSARR 410
Y LI + + +++++M + G H+ Y+ A + G +R
Sbjct: 658 IPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACC--KAGDMQR 715
Query: 411 PVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A K+ + + + TYT LI + D+ALK ++ M G+ P +++
Sbjct: 716 ---AEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHC 772
Query: 469 LLAGLEKLGRVSDAEIY 485
L+ L V + Y
Sbjct: 773 LVTSLLSRATVMEGSTY 789
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 129/340 (37%), Gaps = 36/340 (10%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A ++ M RG+ PN + +T L+ A AL +M+ G++ +ILI
Sbjct: 261 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILIS 320
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
K ++++ + + K +L ++ S + H Q +
Sbjct: 321 GFAKINDSQSADNLFKEAKTKLSSLNGIIY--------------SNIIHAHCQSGNMERA 366
Query: 275 DNDAVEFVTTDIEGPL----SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ E I+ P+ S+ G +I + K LV + L SI +++
Sbjct: 367 EELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNL 426
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++ A S +M+ + Y LI I L+ F I EEM
Sbjct: 427 YVKIG-------KVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 479
Query: 388 KAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
++G + LLI ++G+ R A I + ++ Q + +I Y AG
Sbjct: 480 RSGLQPDRAIYNLLIEAFCKMGNMDR---AICILEKMQKERMQPSNRAFRPIIEGYAVAG 536
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
AL M R G P++ T+N L+ GL + +V A
Sbjct: 537 DMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRA 576
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 195/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A+ + +++ + E Y LI K + K
Sbjct: 287 APTDNSIFLRLISSHCKSGNLDAAVDVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ A+K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K +DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAK 458
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 145/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G + +L+ M
Sbjct: 263 PGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAVDVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F A + D + + + I + + P
Sbjct: 318 -IRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP-- 374
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
++ L ++L+ +M +Q D ++T+I + D A +
Sbjct: 375 ----MIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 430 LRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDSMIENDH 469
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 211/494 (42%), Gaps = 46/494 (9%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FF+ + RS G + + T++T+++++ + R+ ++ LM EKGI D V Y+ +++ L
Sbjct: 262 FFDMMVRS-GPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGL 320
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
AG ++ +++ + +V +++ M + +A +VY M++ G+ PN
Sbjct: 321 FRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNV 380
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR------TI 225
TY++L+ L R G+ EA +F ++ + G++P + LI+ CK+ R I
Sbjct: 381 VTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGI 440
Query: 226 IL--------ILRYMKENRLALRYPVFKEALQTFKVADEN----DSLLWQVHPQFSPEFI 273
+L ++ M N L+ R + EAL+ F A + ++ L+
Sbjct: 441 MLRKGHVPDVVVCSMLINGLS-RQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499
Query: 274 SDNDAVEF--------VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
D ++ V D+ + +GL ++ L +L ++ K D
Sbjct: 500 RTRDGLKMYILMGMYKVIPDVVTYTVLVKGLA----EQGRLDEALALFFQLLKKGFSPDH 555
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ T+I+ C R L F+ + + Y LI + + V E++ E
Sbjct: 556 IIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLRE 615
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP--EDQKCTATYTALIGVYFSAGS 443
+ K G + +I S + A K+F +L Q T+T LI Y G
Sbjct: 616 IIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGR 675
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKE----------KKSI 492
D A+ I+ +M +G P++ T++ L+ G K A E+Y K SI
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735
Query: 493 QADALSKDAVPMEE 506
D L K + MEE
Sbjct: 736 LIDGLCKKGL-MEE 748
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 104/492 (21%), Positives = 209/492 (42%), Gaps = 31/492 (6%)
Query: 4 TISNVY-KILKYSTWDSAQDLLKNLPIKWD----SYTVNQVLKTHPPMEKAWLFFNWVSR 58
T+ NVY K L+ S +L+ I D S +N + + E LF ++
Sbjct: 280 TLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLF--SMAL 337
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D +++++D + + V+ M ++GI+ + VTY+ +++ L G V
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ ++ + P++++Y++ + ++ +++ +Y M+++G P+ ++L+
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
L R G +EAL F + + G+ + N LI+ C + TR + + M ++
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI 517
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y V + L DE +L +Q+ + FSP+ I T I+G
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI-------IYCTLIDG------ 564
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
KK++ + + I D + + +I + + L +K
Sbjct: 565 -----FCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKY 619
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L + Y +I L F K ++ E + +LI R A
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679
Query: 415 AKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
IFS + E + TY+ LI YF + + A ++Y+ M + P++ ++++L+ G
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDG 739
Query: 473 LEKLGRVSDAEI 484
L K G + +A +
Sbjct: 740 LCKKGLMEEASL 751
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 103/495 (20%), Positives = 202/495 (40%), Gaps = 78/495 (15%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F W+S+ G + + + MLD+ ++ RI + +E M KG+ + Y V +
Sbjct: 163 FAWMSK-MGVSISHYAASEMLDLLIDSDRIDVILENYEEMC-KGLGV----YEFVFNSFL 216
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G+V+ +N + + P IV +K L + +++ A+D + M++ G PN
Sbjct: 217 KRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLV 276
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T++ L+ + + +EA +++ M E G+ PD +ILI +AG+ +
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA 336
Query: 233 KENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDN--------------- 276
+ + +F + + +V D ++ +V+ + E IS N
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAI--EVYTRMLKEGISPNVVTYSILINGLCRNG 394
Query: 277 ------------------DAVEFVTTDIEGPLSIDQ-----GLVLILLKKKNL--VAIDS 311
+V ++ I+G + GL I+L+K ++ V + S
Sbjct: 395 RVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCS 454
Query: 312 LL------SGIMDKSIQ-----------LDSAVISTIIEVNCDH--RRRDGA---LLAFE 349
+L G+MD++++ L++ + + +I+ C R RDG +L
Sbjct: 455 MLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID-GCFRLKRTRDGLKMYILMGM 513
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
Y V D+ Y L+ L + + + ++ K G S + LI R
Sbjct: 514 YKVIPDV----VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKR 569
Query: 410 RPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
P +IF L+ + Y LI ++F G + L++ + + + G+ P + T+N
Sbjct: 570 DPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYN 629
Query: 468 VLLAGLEKLGRVSDA 482
++ G L S A
Sbjct: 630 TMICGYCSLKIFSKA 644
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY TM+ + K S +FE+++ +A+T+T ++ G +D A
Sbjct: 620 GLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDA 679
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I+ M + P I++Y+ + F + + A ++Y++M+ + PN +Y++L++
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDG 739
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L + G EEA F + PD A ILI CK G +++ +M N
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 68/138 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+T ++D + + R+ +F M E+G + +TY+ ++ + + A ++E+M
Sbjct: 662 TFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM 721
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P IVSY+ + L ++EA+ ++ I R L P+ Y +L+ + G+
Sbjct: 722 LGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRL 781
Query: 188 EEALEIFSKMQEAGVQPD 205
EA+ ++ M G+ PD
Sbjct: 782 AEAMMLYDHMLVNGIMPD 799
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 87/159 (54%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY+T++D + + ++VF M G+ D TYT +++ VD A+N++
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM K P IV+Y++ + L + R+ D+ EM RG P N TY+ L++ L +
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKN 422
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G + A+ +F+KM++ G++P+ IL++ CK G +
Sbjct: 423 GHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 461
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/477 (20%), Positives = 198/477 (41%), Gaps = 53/477 (11%)
Query: 10 KILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRF 67
K+ YST S L+ I+ D T+N ++ M + F+ +++ RG+ D
Sbjct: 71 KMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTV 130
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T T++ ++ + + + +G ++ V+Y ++++ + GD A+ + +++
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKI 190
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P +V Y+ + L V EA ++ EM +G+ + TY+ L+ GK
Sbjct: 191 DGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKL 250
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+EA+ + ++M + P+ NIL++ CK G
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEG--------------------------- 283
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
KV + L + P+ I+ +T ++G LV + K +++
Sbjct: 284 ----KVKEAKSVLAVMLKACVKPDVIT-------YSTLMDGYF-----LVYEVKKAQHVF 327
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
SL+ + D + +I C ++ D AL F+ + ++ Y +LI
Sbjct: 328 NAMSLMG------VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--Q 425
L K P V ++++EM G V + LI L A +F+ + + +
Sbjct: 382 DGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIR 441
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T T+T L+ G A ++++ + KG H ++ T+NV++ G K G + +A
Sbjct: 442 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEA 498
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 111/225 (49%), Gaps = 7/225 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FN +S G D TYT +++ F + K + +F+ M +K + VTY+
Sbjct: 320 VKKAQHVFNAMSL-MGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L +G + ++ +EM + +++Y++ + L N + A ++ +M +
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN +T+T+L++ L + G+ ++A E+F + G + N++I+ CK G
Sbjct: 439 GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEA 498
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADEN------DSLLWQV 264
+ +L M++N F+ + DEN D +W++
Sbjct: 499 LTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEI 543
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 121/256 (47%), Gaps = 4/256 (1%)
Query: 14 YSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTT 71
YST S L+ I+ D +T+N ++ M + F+ +++ RG++ D T+TT
Sbjct: 942 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+++ +++ + + + +G ++ V+Y ++++ + GD A+ + ++ +
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P +V Y + L + V +A ++ EM +G+ + TY L+ GK +EA+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGET--RTIILILRYMKENRLALRYPVFKEALQ 249
+ +KM + P+ NIL++ CK G+ + +L M++N F+ +
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181
Query: 250 TFKVADENDSLLWQVH 265
DEND + +H
Sbjct: 1182 ALFEKDENDKVEKLLH 1197
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 177/439 (40%), Gaps = 60/439 (13%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ +LD F + K S+ + ++ KGI D +T +++ + G + ++ ++
Sbjct: 62 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI- 120
Query: 129 LKECYPT-IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
LK YP V+ +K L L +VK+A + +++ +G N +Y L+ + + G
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDT 180
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
A+++ K+ +P+ + +I+ CK + M ++ +
Sbjct: 181 RAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 240
Query: 248 LQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK- 302
+ F K+ + L V +P + N V+ + EG + + ++ ++LK
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK--EGKVKEAKSVLAVMLKA 298
Query: 303 --KKNLVAIDSLLSG----------------IMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
K +++ +L+ G + + D + +I C ++ D A
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
L F+ + ++ Y +LI L K P V ++++EM G
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQ------------- 405
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
PA I TY++LI G D+A+ ++ M +GI P+
Sbjct: 406 --------PANVI------------TYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTF 445
Query: 465 TFNVLLAGLEKLGRVSDAE 483
TF +LL GL K GR+ DA+
Sbjct: 446 TFTILLDGLCKGGRLKDAQ 464
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 35 TVNQVLKTHPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ 93
T+ L H + KA+ LFF +G + D TY T++ F ++ + M
Sbjct: 1071 TIIDALCKHQLVSKAYGLFFEM--NVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMV 1128
Query: 94 EKGINIDAVTYTSVMHWLSNAGD--VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
K IN + TY ++ L G +D ++++ +M+ C V++ + LF D
Sbjct: 1129 LKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDE 1188
Query: 152 VKEATDVYKEMIQRGL 167
+ + EMI RGL
Sbjct: 1189 NDKVEKLLHEMIARGL 1204
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/488 (21%), Positives = 183/488 (37%), Gaps = 63/488 (12%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N + K++ LF V R G + D TY T++D +A + + + M +
Sbjct: 88 INGLCKSNELGAGMELFEELVKR--GHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSR 145
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC--YPTIVSYTAYMKILFLNDRVK 153
G + VTY+ +++ L G +D A + +EM K C P I++Y +++ L
Sbjct: 146 GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 205
Query: 154 EATDVYK-----------------------------------EMIQRGLPPNCYTYTVLM 178
EA ++ + +MI G PN TY L+
Sbjct: 206 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALV 265
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L +A K E A + M + GV PD ++L++ CKA + +L M
Sbjct: 266 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 325
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
F + +D + ++ + D VT +I L+
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDK-----VTFNI---------LIA 371
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
K N +L ++ K++Q D +I+ C + + A + + +
Sbjct: 372 GACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 431
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y L+ L K + E +EEM +G L++ L A R A ++
Sbjct: 432 NVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLV 491
Query: 419 SLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
S L P+ T TY L+ + +G ++A+ + + M KG P TF G
Sbjct: 492 SKLKSFGWDPD----TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGG 547
Query: 473 LEKLGRVS 480
L + G ++
Sbjct: 548 LHRSGNLA 555
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 176/443 (39%), Gaps = 83/443 (18%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ ++ + + +FE + ++G + D VTY +++ L AGD++ A + M
Sbjct: 83 TYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGM 142
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP--PNCYTYTVLMEYLVRAG 185
+ C P +V+Y+ + L R+ EA ++ +EM ++ PN TY ++ L +
Sbjct: 143 SSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQS 202
Query: 186 KYEEALEIFSKMQEAG--VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
EA E+ +++ V PD + LI+ CK G+T
Sbjct: 203 MTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQT--------------------- 241
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
EA ND ++ + P ++ N LV L K
Sbjct: 242 -DEAC--------NDDMIAG---GYVPNVVTYN------------------ALVNGLCKA 271
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+ +++ ++DK + D S +++ C R D AL E
Sbjct: 272 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL-------------ELLHG 318
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA-------------LLIHRLGSARR 410
+A G + TF + + + + ++G + + L +LI A
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378
Query: 411 PVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A+ +F + Q T+ ALI AG + A I M G+ P++ T+NV
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 469 LLAGLEKLGRVSDAEIYRKEKKS 491
L+ GL K GR+ + + +E S
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVS 461
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 168/394 (42%), Gaps = 39/394 (9%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWE-EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
Y V+ L AG+ A+ I+ EM PTIV+Y + L ++ + ++++E+
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG-- 220
++RG P+ TY L++ L +AG EEA + M G P+ ++LI CK G
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 221 -ETRTIILILRYMKENRLA--LRYPVFKEALQTFKVADENDSLLWQVHP---QFSPEFIS 274
E R +I + + L + Y F + L + E L+ + + SP
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP---- 223
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
D V F +T I+G L + + D +++G ++ +A+++ + +
Sbjct: 224 --DTVTF-STLIDG---------LCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKA 271
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
D R A++ E V + + Y L+ K + + E++ M G +
Sbjct: 272 --DKMERAHAMI--ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 327
Query: 395 VYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKAL 448
V +I L + R A +I L+P+ T+ LI AG+ ++A
Sbjct: 328 VVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDK----VTFNILIAGACKAGNFEQAS 383
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+++ M K + P + TF L+ GL K G+V A
Sbjct: 384 ALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAA 417
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 85/203 (41%), Gaps = 37/203 (18%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
+ + LF V+++ D T+ ++D +A ++ + + + +LM G+ + VTY
Sbjct: 381 QASALFEEMVAKN--MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++H L +G ++ EEM C P ++Y + + L R +A + ++ G
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD--------------------- 205
P+ TY +L++ L ++GK E+A+ + +M G QPD
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTM 558
Query: 206 --------------KAACNILIE 214
C+ +++
Sbjct: 559 ELLRVVLAKGMLPDATTCSSILD 581
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 214/498 (42%), Gaps = 27/498 (5%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNH-DRFT 68
+++ +A LL + D++ N+V++ ++ A + RS G D F+
Sbjct: 137 RHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFS 196
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ + + S VF+ M + G+ + +TY +++ GD++ + ++M
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P IV+Y + L R+ E + EM + P+ +TY++L + L R G+
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
L +F++ + GV C+IL+ CK G+ +L + L ++ +
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376
Query: 249 QTF-KVADENDS--LLWQVHPQ-FSPEFISDNDAV------EFVT-----------TDIE 287
+ +V D + + Q+ + P+ I+ N + E VT + ++
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
+ L+ L ++LS + K I+ D ++++ C + + A+
Sbjct: 437 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 496
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+ + D+ Y ++I I+ + +VE+M +G S + LL+ L
Sbjct: 497 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 556
Query: 408 ARRPVPAAK-IFSLLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+ + A + I++L + + +Y +I + G DKAL++ + M + GI P+L T
Sbjct: 557 SSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616
Query: 466 FNVLLAGLEKLGRVSDAE 483
++ L++ L GRV D E
Sbjct: 617 YHTLVSALASAGRVHDME 634
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 103/245 (42%), Gaps = 36/245 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T++D +G A ++ V MQ+KGI D +++ SV+ G + AV I ++M
Sbjct: 441 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 500
Query: 128 KLKECYP-----------------------------------TIVSYTAYMKILFLNDRV 152
K+ P +IV+Y +K L + ++
Sbjct: 501 IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQI 560
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EA ++ + +GL P+ +Y ++ G ++ALE+ +M + G++P + L
Sbjct: 561 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTL 620
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
+ AG + + + M + ++ + + V ENDS + + + S +
Sbjct: 621 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY-VRCENDSKVASLKKEMSEKG 679
Query: 273 ISDND 277
I+ +D
Sbjct: 680 IAFDD 684
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
TY +I + G + ++ M G P++ T+NVLL+GL + GR+ + + E
Sbjct: 231 TYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEM 290
Query: 490 KS 491
S
Sbjct: 291 AS 292
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 35/212 (16%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D TY +++D F + + +F+LM KG D VTY+ +++ A VD
Sbjct: 372 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 431
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ ++ E+ K P ++Y + + ++ A ++++EM+ RG+PP+ TY +L+
Sbjct: 432 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 491
Query: 179 EYLVRAGKYEEALEIFSKMQEA-----------------------------------GVQ 203
+ L G+ +ALEIF KMQ++ GV+
Sbjct: 492 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 551
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKEN 235
PD N++I CK G ++ R MKE+
Sbjct: 552 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 583
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 200/467 (42%), Gaps = 19/467 (4%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYTTMLDIFGEAKRISSMK 86
I+ D YT+ ++ + +K F+ + R+ G+ D T++T+++ F R+S
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 189
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ + M E D VT +++++ L G V A+ + + M P V+Y + L
Sbjct: 190 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ A D++++M +R + + Y+++++ L + G +++AL +F++M+ G++ D
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 309
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
+ LI C G+ +LR M + F + F + L +
Sbjct: 310 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV----KEGKLLEAKE 365
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
++ E I+ A + +T + L+ K+ L + + ++ K + D
Sbjct: 366 LYN-EMITRGIAPDTITYN---------SLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 415
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
S +I C +R D + F L Y L+ + E+ +EM
Sbjct: 416 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 475
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSA 444
G V +L+ L A +IF + + + Y +I +A
Sbjct: 476 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 535
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRKEKK 490
D A ++ ++ KG+ P + T+NV++ GL K G +S+A+ ++RK K+
Sbjct: 536 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 82/155 (52%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY T++ F ++ ++++ K +F+ M +G+ VTY ++ L + G+++
Sbjct: 442 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 501
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I+E+M+ I Y + + +V +A ++ + +G+ P+ TY V++
Sbjct: 502 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 561
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L + G EA +F KM+E G PD NILI
Sbjct: 562 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 74/156 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG TY +LD + ++ +FE MQ+ + + Y ++H + NA VD
Sbjct: 477 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 536
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + K P +V+Y + L + EA ++++M + G P+ +TY +L+
Sbjct: 537 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ ++E+ +M+ G D + ++I+
Sbjct: 597 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 632
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/394 (18%), Positives = 152/394 (38%), Gaps = 31/394 (7%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
V+ A++++E M PT + + + + K M G+ + YT T+
Sbjct: 80 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 139
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
++ R K A + + + G +PD + L+ C G + ++ M E +
Sbjct: 140 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199
Query: 237 ----LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
L + +V++ + V F P+ ++ + + L++
Sbjct: 200 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259
Query: 293 DQGLVLILLKKKNL--------VAIDSLL-SGIMD-----------KSIQLDSAVISTII 332
D + ++++N+ + IDSL G D K I+ D S++I
Sbjct: 260 D---LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 316
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C+ + D + ++ + + ALI + +K + E+ EM G +
Sbjct: 317 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 376
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALK 449
LI A ++F L+ + C TY+ LI Y A D ++
Sbjct: 377 PDTITYNSLIDGFCKENCLHEANQMFDLMVS-KGCEPDIVTYSILINSYCKAKRVDDGMR 435
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+++ + KG+ P+ T+N L+ G + G+++ A+
Sbjct: 436 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 179/434 (41%), Gaps = 30/434 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D TY +++ F + R+ + F M+ +G+ + VT+++ + G V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ ++ +M+++ +YT + R+ +A + EM+++G+P N TYTVL
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L + K EA ++ M++AGV+ ++ LI + + +L MK L
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429
Query: 238 ALR---YPVFKEALQTFKVADENDSLLWQV-HPQFSPEFISDNDAVEFVTTDIEGPLSID 293
L Y + L DE SLL ++ P +I ++ + P +I
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI- 488
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
++L I+D Q + +I+ C D A+ F
Sbjct: 489 -----------------AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG-VYLGALLIHRLGSARR-- 410
+ L+ AY AL+ L K + ++ EM G SL V ALL L
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591
Query: 411 --PVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
+ A I S L D C YT I + + +A +++ M GI P +N
Sbjct: 592 AFALKAKMIDSGLQLDLFC---YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648
Query: 469 LLAGLEKLGRVSDA 482
L++ +KLG + +A
Sbjct: 649 LISKYQKLGNLEEA 662
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 178/423 (42%), Gaps = 26/423 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FT+ ++D + ++ + +F M+E G D VT+ S++ G++D + EE
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M+ C +V+Y A + R++ A + M + G+ N T++ ++ + G
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR---YPV 243
EA+++F++M+ G+ ++ LI+ CKAG I++L M + L Y V
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 244 FKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+ L + KVA+ D L + N+ + TT I G
Sbjct: 369 LVDGLCKERKVAEAEDVLRM-----MEKAGVRANELL--YTTLIHGH-----------FM 410
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
KN LLS + +K ++LD ++ +I+ C+ + D A + L
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y ++ K P+ +++++ +G V LI L A A F+ +
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530
Query: 423 E---DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ D A YTAL+ G ++A++++ M KG+ + LL G K G +
Sbjct: 531 DLGLDPNVQA-YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589
Query: 480 SDA 482
DA
Sbjct: 590 HDA 592
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 100/503 (19%), Positives = 199/503 (39%), Gaps = 72/503 (14%)
Query: 44 PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINID--- 100
P A L + ++R R + H R + ++ + +R + +L+ + +
Sbjct: 63 PSTAHACLAAHLLARDRLYAHSRRVLSRLVAL----RRPHLAASLVDLLHRAALALGPRR 118
Query: 101 ---AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
A +++ L++ G +D AV ++ P + ++ + DR +
Sbjct: 119 SALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCN-HILLRLARDR---SGR 174
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE--- 214
+ + + ++ PN +T+ +++++L + G+ EA +FS+M+E G PD N LI+
Sbjct: 175 LVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYG 234
Query: 215 KC-----------------CKAGETRTIILILRYMKENRLALRYPVFKE----------- 246
KC CKA LI + K R+ Y F
Sbjct: 235 KCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVV 294
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV-TTDIEG----------------- 288
TF A + L+ + F+ + EF T I+G
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354
Query: 289 -----PLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
PL++ VL+ L K++ + + +L + ++ + + +T+I + ++
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG-VYLGAL 400
+ AL L L+ + Y ALI L ++ + ++ +M ++G + +
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474
Query: 401 LIHRLGSARRPVPAAKIFSLLPED-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ S + P A + +L Q TY ALI AGS D+A+ + M G+
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA 482
P++ + L+ GL K G +++A
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEA 557
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA + N + + G + Y ++ +G IS V + M+ GI VTY
Sbjct: 598 IQKANEYLNEL-MACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYC 656
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+MHW+ +AG VD A ++E+ + +V YT ++ L ++ EA + ++EM R
Sbjct: 657 SLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSR 716
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+PPN TYT LM ++G EEA ++F +M +G+ PD + N L+
Sbjct: 717 SIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLV 764
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/438 (19%), Positives = 172/438 (39%), Gaps = 25/438 (5%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI--NIDAVTYTSVMHW 110
F+ + + + ++YT+M+ + ++ + + G+ + AV Y +M
Sbjct: 216 FDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDA 275
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L +G VD A+ + M+ P++V++ + L +DR E + +EM G+ PN
Sbjct: 276 LCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPN 335
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
L+++ R G + EA+ +F +M ++ N++ CK GE IL
Sbjct: 336 EVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILE 395
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
M + + +F + + ++ + + NDA+ T
Sbjct: 396 EMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQG 455
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
Q V I LK +++K + ++ A + +I C+ + GA
Sbjct: 456 RRHQEAVGIWLK-------------MLEKGLCINIATSNALIHGLCEGKNMKGATEVLRT 502
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH------R 404
V + L+ Y +I K + + ++ ++M + G Y+ +IH +
Sbjct: 503 MVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGK 562
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
+ A + KI + P+ +Y +I Y A KA + + G+ P+
Sbjct: 563 MEEALHLLGQMKIEGVQPD----VVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAV 618
Query: 465 TFNVLLAGLEKLGRVSDA 482
+N L+ G + G +S A
Sbjct: 619 IYNALIGGYGRNGNISGA 636
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 30 KWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SM 85
K D+Y N ++ + ME+A + + G D +Y T++D + +AK I +
Sbjct: 544 KPDAYMFNSIIHAYCDLGKMEEALHLLGQM-KIEGVQPDVVSYGTIIDGYCKAKDIQKAN 602
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+Y+ ELM G+ +AV Y +++ G++ GA+ + + M+ PT V+Y + M
Sbjct: 603 EYLNELMA-CGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHW 661
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ V EA ++++ + + YT++++ L + GK +EA+ F +M+ + P+
Sbjct: 662 MCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPN 721
Query: 206 KAACNILIEKCCKAG 220
K L+ CK+G
Sbjct: 722 KITYTTLMYAYCKSG 736
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 164/397 (41%), Gaps = 30/397 (7%)
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-RGLPPN 170
S G + AV+ + + + P++ + A ++ L + V+ EM + + PN
Sbjct: 169 SARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPN 228
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC--NILIEKCCKAGETRTIILI 228
Y+YT +++ L + GK ++ +I S + AG+Q A N+L++ CK+G I +
Sbjct: 229 GYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRL 288
Query: 229 LRYMKENRLALRYPVFKEALQTFKVAD---ENDSLLWQVHP-QFSPEFISDNDAVEFVTT 284
M+E+R+A F + K +D E +LL ++ +P + N+ +++
Sbjct: 289 KGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHC- 347
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+K + L ++ K ++ + + I C + A
Sbjct: 348 -----------------RKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERA 390
Query: 345 LLAFEYSVKMDLNLERTAYLALI-GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
E + + + + +++ G+L + V ++ EM K G L
Sbjct: 391 ERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTK 450
Query: 404 RLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
+L RR A I+ + E C AT ALI + A ++ +TM KG+
Sbjct: 451 QLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL 510
Query: 462 SLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADA 496
T+N+++ G K ++ +A R + +K + DA
Sbjct: 511 DNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDA 547
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D TY M+ + +I + + M KG DA + S++H + G ++
Sbjct: 505 NKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKME 564
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+++ +MK++ P +VSY + +++A + E++ GL PN Y L+
Sbjct: 565 EALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALI 624
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
R G A+ + M+ G+QP L+ C AG
Sbjct: 625 GGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAG 666
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G TY +++ A + K +FE ++ I + V YT ++ L G +D
Sbjct: 645 SIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMD 704
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+N +EEM+ + P ++YT M + +EA+ ++ EM+ G+ P+ +Y L+
Sbjct: 705 EAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLV 764
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAAC--NILIEK 215
+ ++A+E +++ Q D C N+L+ +
Sbjct: 765 TGFSQVDSLDKAIEKAAEISSIMTQND---CLDNVLVNR 800
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF D + + +++ + + ++ ++ M+ +G+ D V+Y +++ A D+
Sbjct: 541 KGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQK 600
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A E+ P V Y A + N + A V M G+ P TY LM
Sbjct: 601 ANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMH 660
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ AG +EA +F + ++ ++ I+I+ CK G+
Sbjct: 661 WMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGK 702
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 181/464 (39%), Gaps = 84/464 (18%)
Query: 27 LPIKWDSYTVNQVLKTHP-PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+PI+ + +V++ P +E++W + V S G+ + + ++ F +A + +
Sbjct: 209 VPIRGCENLLRRVVRLRPVEIERSWALYLEVLDS-GYPPKIYFFNVLMHGFCKAGDVGNA 267
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ VF+ + ++G+ V++ +++ +GDV+ + M+ + P + +++A +
Sbjct: 268 RLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALING 327
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L R+ E + ++ EM RGL PN T+T L++ + GK + AL+ F M GV+PD
Sbjct: 328 LCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPD 387
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
N LI CK G+ +KE R + N+ +
Sbjct: 388 LVTYNALINGLCKVGD----------LKEARRLV-----------------NEMTASGLK 420
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
P D + F TT I+G K ++ + + ++++ I+LD
Sbjct: 421 P----------DKITF-TTLIDG-----------CCKDGDMESALEIKRRMVEEGIELDD 458
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ +I C R A + + Y +I K ++++E
Sbjct: 459 VAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKE 518
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
M GH GV TY AL+ G
Sbjct: 519 MQSDGHVPGV---------------------------------VTYNALMNGLCKQGQMK 545
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
A + M G+ P+ T+N+LL G K G D +I+ EK
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSEK 589
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T+T LI G D ALK ++ M +G+ P L T+N L+ GL K+G + +A R+
Sbjct: 355 TFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA---RRLV 411
Query: 490 KSIQADALSKDAV 502
+ A L D +
Sbjct: 412 NEMTASGLKPDKI 424
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 194/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E Y LI K + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ A+K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N+L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAK 458
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 143/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G +L+ M
Sbjct: 263 PGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F A + D + + + I + + P
Sbjct: 318 -IRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP-- 374
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
++ L ++L+ +M +Q D ++T+I + D A +
Sbjct: 375 ----MIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY L+ +K N ++ M + H
Sbjct: 430 LRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDH 469
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ +LD F + ++ K +FE M I+ D VTY+S+++ L +D A +++ M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C +VSY + RV++ +++EM QRGL N TY L++ +AG
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++A E FS+M G+ PD NIL+ C GE ++I M++ + L
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D Y ++D + KR++ F+ ++ KGI + VTYT++++ L N+ A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M K+ P +++Y+A + N +V EA ++++EM++ + P+ TY+ L+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + +EA ++F M G D + N LI CKA + + R M + L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 241 YPVFKEALQTFKVADEND 258
+ +Q F A + D
Sbjct: 365 TVTYNTLIQGFFQAGDVD 382
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+S + K+ KY S ++ L I+ D YT N V+ + L + + + G+
Sbjct: 92 LSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGY 151
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
DR T ++++ F R+S + + M E G D V Y +++ L V+ A +
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++E++ K P +V+YTA + L + R +A + +MI++ + PN TY+ L++ V
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ GK EA E+F +M + PD + L+ C
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLC 306
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H +++A F+ + S+G D +Y T+++ F +AKR+ +F M ++G+ + V
Sbjct: 308 HDRIDEANQMFDLMV-SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY +++ AGDVD A + +M P I +Y + L N +++A ++++M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+R + + TYT ++ + + GK EEA +F + G++PD ++ C G
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 223 RTIILILRYMKENRL 237
+ + MK+ L
Sbjct: 487 HEVEALYTKMKQEGL 501
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 9/214 (4%)
Query: 15 STWDSAQDLLKNLPIKWDSYTV-------NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRF 67
S W A LL ++ K + V + +K +E LF V S + D
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS--IDPDIV 296
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+++++ RI +F+LM KG D V+Y ++++ A V+ + ++ EM
Sbjct: 297 TYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ V+Y ++ F V +A + + +M G+ P+ +TY +L+ L G+
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
E+AL IF MQ+ + D +I CK G+
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/433 (20%), Positives = 171/433 (39%), Gaps = 52/433 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +D +T+ +++ F ++S + M + G D VT S+++ V A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V++ ++M P IV+Y A + L RV +A D +KE+ ++G+ PN TYT L+
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + ++ +A + S M + + P+ + L++ ++K ++
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA---------------FVKNGKVLEA 279
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+F+E V P+ ++ + V GL L
Sbjct: 280 KELFEE----------------MVRMSIDPDIVTYSSLV--------------NGLCL-- 307
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+ + + ++ K D +T+I C +R + + F + L
Sbjct: 308 --HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI + K E +M G S ++ +L+ L A IF
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 421 LPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ + + TYT +I G ++A ++ ++ KG+ P + T+ +++GL G
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 479 VSDAE-IYRKEKK 490
+ + E +Y K K+
Sbjct: 486 LHEVEALYTKMKQ 498
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 150/385 (38%), Gaps = 24/385 (6%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ A++++ +M +P+IV + + + + + K+M G+ + YT+ +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE-- 234
++ + AL I KM + G +PD+ L+ C+ + ++ M E
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 235 --NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ + +T +V D D P ++ T + G
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT-------YTALVNG---- 234
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L LLS ++ K I + S +++ + + A FE V
Sbjct: 235 -------LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+M ++ + Y +L+ L + + ++ + M G V LI+ A+R
Sbjct: 288 RMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 413 PAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
K+F + + T TY LI +F AG DKA + + M GI P + T+N+LL
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 471 AGLEKLGRVSDAEIYRKEKKSIQAD 495
GL G + A + ++ + + D
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMD 432
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FF+ + G + D +TY +L + + +FE MQ++ +++D VTYT
Sbjct: 381 VDKAQEFFSQMDFF-GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+V+ + G V+ A +++ + LK P IV+YT M L + E +Y +M Q
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
GL N T + G + E+ KM G P
Sbjct: 500 GLMKNDCTLS--------DGDITLSAELIKKMLSCGYAP 530
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 180/437 (41%), Gaps = 46/437 (10%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ FTY ++D + R+ + M+ KG+ +D V Y++++ + G +D ++
Sbjct: 44 NSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALF 103
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM K P +V Y+ + +EAT V M +RG+ P+ YTYT ++ L +
Sbjct: 104 DEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKD 163
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM--KENRL-ALRY 241
G+ +AL++F M E G +P N+LI CK G I M K RL + Y
Sbjct: 164 GRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSY 223
Query: 242 PVFKEALQTFKVADENDSL---LWQVHPQFSPEFISDNDAVEFVTTDIEGPLS------- 291
L DE L L + P+ I+ N ++ + EG L
Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCK--EGRLDKAVEIYD 281
Query: 292 --IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
I++G L L+ + + SGI+DK+++L V H
Sbjct: 282 TMIERGSFGNLFTCHILIG-EYIKSGIIDKAMELWKRV----------H----------- 319
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
K+ L T Y +I K++ + M +G S ++ L+ L
Sbjct: 320 ---KLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376
Query: 410 RPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A ++F + E C T ++ +I AG A ++ M + G+ P T+
Sbjct: 377 SLEQARRLFQEMKE-SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTY 435
Query: 467 NVLLAGLEKLGRVSDAE 483
+ + L KLG++ +A+
Sbjct: 436 SSFINRLSKLGQMEEAK 452
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 175/455 (38%), Gaps = 49/455 (10%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +Y T+++ + KR+ + M+ ++ TY +M L G V+ A+ +
Sbjct: 9 DIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLL 68
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EMK K +V Y+ + + ++ EM+++G+ PN Y+ L+ +
Sbjct: 69 GEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKK 128
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G + EA + M E G+QPD +I CK G R + + M E
Sbjct: 129 GLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK--------- 179
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID----QGLVLIL 300
+E ++ + V + DA + T +E ++ L++ L
Sbjct: 180 ---------GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230
Query: 301 LKKKNLVAIDSLLSGIMDKS--IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L L S +++ ++ D +T+I+ C R D A+ + D +
Sbjct: 231 CNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIY------DTMI 284
Query: 359 ERTAYLALIGILIKLNTFPKVAEI--VEEMTKAGHSLGVYL----------GALLIHRLG 406
ER ++ L I + + K I E+ K H LG+ G +H L
Sbjct: 285 ERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLN 344
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A+ KI L P Y L+ S ++A ++++ M P +F
Sbjct: 345 FAKGLFSRMKISGLSPT----LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDA 501
N+++ G K G + A ++ +Q L+ DA
Sbjct: 401 NIMIDGTLKAGDIHSA---KELLNDMQQMGLTPDA 432
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ M+D F + ++ K +F M+ G++ Y ++M L ++ A +++EM
Sbjct: 329 TYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEM 388
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C P +S+ + + A ++ +M Q GL P+ YTY+ + L + G+
Sbjct: 389 KESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQM 448
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EEA F M +G+ PD + LI+ E +I +LR M + + L +
Sbjct: 449 EEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSI 508
Query: 248 LQTFKVADENDSLLWQVHPQFSPE 271
L TF + ++ P FS E
Sbjct: 509 L-TFLCNSAEHLHVMELLPNFSSE 531
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 104/214 (48%), Gaps = 9/214 (4%)
Query: 13 KYSTWDSAQDLLKNLP---IKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDR 66
K W A +L + I+ D YT + L KA F+ ++ +G
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE-KGEEPST 185
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY +++ + I +FE M EKG ++ V+Y +++ L N G +D A+ ++
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245
Query: 127 MKLKECY--PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ Y P ++++ ++ L R+ +A ++Y MI+RG N +T +L+ +++
Sbjct: 246 LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKS 305
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G ++A+E++ ++ + G+ P +++I+ CK
Sbjct: 306 GIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCK 339
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + + Y+ +++ F + V M E+GI D TYT ++ L G
Sbjct: 109 KGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARK 168
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+++++ M K P+ V+Y + L + +A +++ M+++G +Y L+
Sbjct: 169 ALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIM 228
Query: 180 YLVRAGKYEEALEIFSKMQEAG--VQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L GK +EA+++FS + E G V+PD N +I+ CK G + I M E
Sbjct: 229 GLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 143/358 (39%), Gaps = 26/358 (7%)
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK P IVSY + L R+++A D+ EM PN +TY +LM+ L + G+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEA+ + +M+ G++ D + LI C G + M E ++ V+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID----QGLVLILLK 302
+ F LW+ +A + T E + D ++ L K
Sbjct: 121 LINGFCKKG-----LWR-------------EATAVLHTMTERGIQPDVYTYTCMIGGLCK 162
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
L + +K + + + +I C A FE ++ LE +
Sbjct: 163 DGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS 222
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSL--GVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI L + ++ + + G+ + V +I L R A +I+
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDT 282
Query: 421 LPEDQKCTATYTA--LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ E +T LIG Y +G DKA++++K + + G+ PS T++V++ G K+
Sbjct: 283 MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM 340
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 1/188 (0%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
P +D T+ L +E+A F + S D ++ M+D +A I S K
Sbjct: 360 PTLFDYNTLMASLCKESSLEQARRLFQEMKESN-CEPDTISFNIMIDGTLKAGDIHSAKE 418
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ MQ+ G+ DA TY+S ++ LS G ++ A ++ M P Y + +K
Sbjct: 419 LLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFG 478
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
LND ++E ++ ++M G+ + ++ +L + ++ +E+
Sbjct: 479 LNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSI 538
Query: 208 ACNILIEK 215
+C+ L+ K
Sbjct: 539 SCDKLLMK 546
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 77/169 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + F Y T++ + + + +F+ M+E D +++ ++ AGD+ A
Sbjct: 357 GLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSA 416
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M+ P +Y++++ L +++EA + MI G+ P+ + Y L++
Sbjct: 417 KELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG 476
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ EE + + +M + GV D N ++ C + E ++ +L
Sbjct: 477 FGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 99/222 (44%), Gaps = 1/222 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
TV Q L ++KA ++ + RG + FT ++ + ++ I +++ + +
Sbjct: 262 TVIQGLCKEGRLDKAVEIYDTMIE-RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHK 320
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G+ + TY+ ++ ++ A ++ MK+ PT+ Y M L +++
Sbjct: 321 LGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQ 380
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A +++EM + P+ ++ ++++ ++AG A E+ + MQ+ G+ PD + I
Sbjct: 381 ARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFIN 440
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
+ K G+ M + + V+ ++ F + DE
Sbjct: 441 RLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDE 482
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 119/280 (42%), Gaps = 22/280 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DRF++ T++ ++ V E M+ +G+ D VT+ S++H L V A
Sbjct: 210 GVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEA 269
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM + P V+YT + ++EA + EM G+ P TY ++
Sbjct: 270 SQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRK 329
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L GK +E + ++M E VQ D CN LI CK G+ + + + R M E+ L L
Sbjct: 330 LCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLD 389
Query: 241 YPVFKEALQTFKVADEND----SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+K + F A E D +L + FSP + S+ +
Sbjct: 390 QFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNY------------------SVLSWI 431
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
V L K N VA+ ++ +M + D AV ++I C
Sbjct: 432 VDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLC 471
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 157/377 (41%), Gaps = 23/377 (6%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F+ ++R+ G + Y ML + +A + + + M G+ +D ++ +V+
Sbjct: 168 FDQMTRA-GVAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYC 226
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G A+ + E M+ + +V++ + + L RVKEA+ + +EM G+ P+
Sbjct: 227 RKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHV 286
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TYT L++ RAG EEA+++ +M+ G+ P A N ++ K C+ G+ + + ++L M
Sbjct: 287 TYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEM 346
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
E ++ + + + + S A++ +E L +
Sbjct: 347 DERKVQADHVTCNTLINAYCKRGDMTS------------------ALKVKRRMMESGLQL 388
Query: 293 DQ----GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
DQ LV K K L L +M + +V+S I++ C+ L
Sbjct: 389 DQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIP 448
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ +K ++ Y +LI L K + EM G + A L +A
Sbjct: 449 DELMKRGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTA 508
Query: 409 RRPVPAAKIFSLLPEDQ 425
+PV A I + + + Q
Sbjct: 509 GKPVAALDILNEMAKKQ 525
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 11/211 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R D T T+++ + + ++S V M E G+ +D TY +++H A ++D
Sbjct: 349 RKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDE 408
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A EM P + + L + + E+++RG PP+ Y L+
Sbjct: 409 AKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIR 468
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK---AGETRTIILILRYMKENR 236
L + G + A +F++MQ G++ D C + C AG+ + IL M + +
Sbjct: 469 RLCKKGFIDLAGNVFNEMQGKGLEAD---CLVYATLACAYLTAGKPVAALDILNEMAKKQ 525
Query: 237 LALRYPVFKEALQTFKVADENDSL--LWQVH 265
L + ++ ++ ADE SL LW VH
Sbjct: 526 LYITPQIYNCMCTSY--ADEKGSLNMLW-VH 553
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/374 (18%), Positives = 144/374 (38%), Gaps = 29/374 (7%)
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
S + A+ +++ M+ +E P + +A + L + A V+ +M + G+ N
Sbjct: 121 SQSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNT 180
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
+ Y ++ ++AG A + ++M AGV D+ + N +I C+ G + +
Sbjct: 181 HVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRER 240
Query: 232 MKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVE--FVTTD 285
M+ + + + +V + + L +P+ ++ V+ D
Sbjct: 241 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD 300
Query: 286 IEGPLSID---------------QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+E + + ++ L + + ++ LL+ + ++ +Q D +T
Sbjct: 301 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 360
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I C AL ++ L L++ Y AL+ K + E + EM AG
Sbjct: 361 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG 420
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTALIGVYFSAGSAD 445
S + + ++ L + V I L P D+ A Y +LI G D
Sbjct: 421 FSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDK---AVYRSLIRRLCKKGFID 477
Query: 446 KALKIYKTMCRKGI 459
A ++ M KG+
Sbjct: 478 LAGNVFNEMQGKGL 491
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 344 ALLAFEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
A LA +MD + L+R ++ +I + + + + E M G V
Sbjct: 196 AALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNS 255
Query: 401 LIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
LIH L RR A+++ + P+ TYT L+ Y AG ++A+K+ M
Sbjct: 256 LIHGLCKERRVKEASQLLREMAMAGVAPDH----VTYTTLVDGYCRAGDLEEAVKLRGEM 311
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALS 498
G+ P + T+N +L L + G++ + + E ++ +QAD ++
Sbjct: 312 EAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVT 357
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
+A L F+ + + G + TY+ ++D+F ++ + M + G+ + Y S
Sbjct: 384 HEAELLFDRMGKI-GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+++ GD+ A EM K+ PT+V+YT+ M ++ +A +Y EM +G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ P+ YT+T L+ L RAG +A+++F++M E V+P++ N++IE C+ G+
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 227 LILRYMKE 234
L+ M E
Sbjct: 563 EFLKEMTE 570
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 37/208 (17%)
Query: 51 LFFNWVS--RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
LFF + RG D YT+M+D + +++LM +G + VTYT+V+
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND------------------ 150
+ L AG V+ A + +M+ P V+Y ++ IL +
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL 784
Query: 151 -----------------RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
R++EA+++ MI G+ P+C TYT ++ L R ++A+E+
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ M E G++PD+ A N LI CC AGE
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 197/463 (42%), Gaps = 58/463 (12%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI---SSMKYVFELMQEKGINIDAVTYTS-- 106
FFN++ RGF+H ++ ++ +A SS+ L K ++ V ++
Sbjct: 90 FFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYE 149
Query: 107 -------------VMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRV 152
+ H++ + +DG + +++ M K P + + +A + L
Sbjct: 150 KCKLSSSSSFDLLIQHYVRSRRVLDGVL-VFKMMITKVSLLPEVRTLSALLHGLVKFRHF 208
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
A +++ +M+ G+ P+ Y YT ++ L A E+ + M+ G + N+L
Sbjct: 209 GLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVL 268
Query: 213 IEKCCKAGETRTIILILRYMKENRL--------ALRYPVFKEALQTFKVADEN-DSLLWQ 263
I+ CK + + I + + L L Y + K +Q F++ E D +L
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK--VQEFEIGLEMMDEMLCL 326
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
+FSP + V++ +EG L K+ + +L+ ++D +
Sbjct: 327 ---RFSPSEAA-------VSSLVEG-----------LRKRGKIEEALNLVKRVVDFGVSP 365
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
+ V + +I+ C R+ A L F+ K+ L Y LI + + +
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSAR-RPVPAAKIFSLLPEDQK---CTATYTALIGVYF 439
EM G L VY LI+ G + + AA+ F ++K TYT+L+G Y
Sbjct: 426 GEMVDTGLKLSVYPYNSLIN--GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
S G +KAL++Y M KGI PS+ TF LL+GL + G + DA
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 177/460 (38%), Gaps = 62/460 (13%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D + YT ++ E K +S K + M+ G +++ V Y ++ L V
Sbjct: 220 SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW 279
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV I +++ K+ P +V+Y + L + ++ EM+ P+ + L+
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
E L + GK EEAL + ++ + GV P+ N LI+ CK + L+ M ++
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM--GKIG 397
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
LR ND VT I L+
Sbjct: 398 LR---------------PND-----------------------VTYSI---------LID 410
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ ++ L S L ++D ++L +++I +C A + L
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y +L+G K + EMT G + +Y L+ L A A K+F
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 419 SLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ + E + TY +I Y G KA + K M KGI P ++ L+ GL
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 477 GRVSDAEIYRKEKKSIQADALSKDAVPMEEKIC--DLLYG 514
G+ S+A+++ D L K + E IC LL+G
Sbjct: 591 GQASEAKVF--------VDGLHKGNCELNE-ICYTGLLHG 621
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 168/408 (41%), Gaps = 20/408 (4%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++D + +++ + + + K + D VTY ++++ L + + + + +EM
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P+ + ++ ++ L +++EA ++ K ++ G+ PN + Y L++ L + K+
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR-YPVFKEA 247
EA +F +M + G++P+ +ILI+ C+ G+ T + L M + L L YP
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY---- 440
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ L H +F ++ E + +E + L+ K +
Sbjct: 441 -----------NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
L + K I +T++ A+ F + ++ R Y +I
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
+ K E ++EMT+ G Y LIH L + AK+F C
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ-ASEAKVFVDGLHKGNC 608
Query: 428 TAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
YT L+ + G ++AL + + M ++G+ L + VL+ G
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 166/424 (39%), Gaps = 51/424 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y ++++ + IS+ + M K + VTYTS+M + G ++ A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ EM K P+I ++T + LF +++A ++ EM + + PN TY V++E
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
G +A E +M E G+ PD + LI C G+ + + + + L
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ L F + + L E V ++ L L+
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQ--------------EMVQRGVDLDLVCYGVLIDGS 657
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
LK K+ LL + D+ ++ D + +++I+ A ++ +
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y A+I L K F AE+ L S +PV S
Sbjct: 718 VTYTAVINGLCKAG-FVNEAEV----------------------LCSKMQPV------SS 748
Query: 421 LPEDQKCTATYTALIGVYFSAGSAD--KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+P TY + + + G D KA++++ + KG+ + T+N+L+ G + GR
Sbjct: 749 VPNQ----VTYGCFLDI-LTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGR 802
Query: 479 VSDA 482
+ +A
Sbjct: 803 IEEA 806
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 88/213 (41%), Gaps = 41/213 (19%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGD 116
RG + D Y ++D G K K F L++E +G+ D V YTS++ S GD
Sbjct: 641 RGVDLDLVCYGVLID--GSLKH-KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKIL------------------------------ 146
A IW+ M + C P V+YTA + L
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 147 FLNDRVKEATDVYKEM-----IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
FL+ K D+ K + I +GL N TY +L+ R G+ EEA E+ ++M G
Sbjct: 758 FLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
V PD +I + C+ + + I + M E
Sbjct: 818 VSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G +T+TT+L A I +F M E + + VTY ++ GD+
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC----YTY 174
A +EM K P SY + L L + EA V+ + + +G NC Y
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKG---NCELNEICY 615
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
T L+ R GK EEAL + +M + GV D +LI+ K + + +L+ M +
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 235 NRL 237
L
Sbjct: 676 RGL 678
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M+KA N + + G + TY ++ F RI + M G++ D +TYT
Sbjct: 769 MQKAVELHNAILK--GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ L DV A+ +W M K P V+Y + + + +AT++ EM+++
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Query: 166 GLPPN 170
GL PN
Sbjct: 887 GLIPN 891
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQE--KGINIDAVTYTSVMHWLSNAGDVDGAVN 122
++ TY LDI + + M+ EL KG+ + TY ++ G ++ A
Sbjct: 751 NQVTYGCFLDILTKGE--VDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M P ++YT + L + VK+A +++ M ++G+ P+ Y L+
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Query: 183 RAGKYEEALEIFSKMQEAGVQPD 205
AG+ +A E+ ++M G+ P+
Sbjct: 869 VAGEMGKATELRNEMLRQGLIPN 891
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 190/452 (42%), Gaps = 37/452 (8%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG N D ++Y T++D + ++ ++M G +TY ++++ + G +D
Sbjct: 334 RGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDD 393
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +W M + P +S + + F + ++A +++KE + RGL N T ++
Sbjct: 394 ALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVIN 453
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + + EA E+F +M+E D LI+ CK G+ I M+
Sbjct: 454 GLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVP 513
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG-LVL 298
+F + +A ++ + ND ++ P ++ G L+
Sbjct: 514 SVEMFNSFITGLFIAKQSGKV---------------NDIRVEMSAKGLSPNTVTYGALIA 558
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
K+ NL L +++K ++ + + S ++ + D A L + D+
Sbjct: 559 GWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQ 618
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG------VYLGALLIHRLGSARRPV 412
+ +A IG KVA I+E + H V LG + R+ AR
Sbjct: 619 DCSASTLNIG---------KVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLF 669
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
K+ +P++ TY++LI ++GS D A + M + P++ T+N L+ G
Sbjct: 670 EDLKVKGFIPDN----FTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYG 725
Query: 473 LEKLGRVSDA-EIYRK-EKKSIQADALSKDAV 502
L K VS A ++ K + K I +A++ + +
Sbjct: 726 LCKSCNVSRAVSLFNKLQSKGISPNAITYNTL 757
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAK--RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G NH + I G K R++ + +FE ++ KG D TY+S++H S +G +D
Sbjct: 639 GGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSID 698
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +EM P IV+Y + + L + V A ++ ++ +G+ PN TY L+
Sbjct: 699 LAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLI 758
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + G EA ++ KM + G+QP ILI C G I +L M EN +
Sbjct: 759 DGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVD 818
Query: 239 LRYPVFKEALQTF 251
+ + +Q +
Sbjct: 819 PNFITYWTLIQGY 831
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 185/455 (40%), Gaps = 58/455 (12%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
LF + V + F+ ++ +L +A ++ YVF+ M + G + +++
Sbjct: 79 LFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQ 138
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L AGD+ AV ++++M+ P + K + RV A D KEM + GL N
Sbjct: 139 LVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVN 198
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
Y +M+ R G+ E A ++ +Q G+ P+ +L++ CK G +++
Sbjct: 199 LVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVK 258
Query: 231 YMKENRLALRYPVFKEAL-----QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+KEN + V AL Q ++ D N + D E +
Sbjct: 259 EIKENEKIVIDEVAYGALINGYCQRGRMEDANR--------------VRD----EMIDAG 300
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
++ + + ++ K + ++ LL + + LD +T+++ C R+
Sbjct: 301 VQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYC---RKGFMT 357
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
AFE M N G + NT + S G AL + L
Sbjct: 358 KAFETCDMMVRN-------GFTGTTLTYNT----------LLNGFCSRGAIDDALKLWFL 400
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
R ++P + C + L+ +F AG ++AL ++K +G+ ++ T
Sbjct: 401 MLKR---------GVVPNEISC----STLLDGFFKAGKTEQALNLWKETLARGLARNVVT 447
Query: 466 FNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
N ++ GL K R+++AE +R ++ S D+L+
Sbjct: 448 INTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLT 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 89/176 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + T T+++ + +R++ + +F M+E D++TY +++ GD+
Sbjct: 438 ARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLG 497
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A I EM+ P++ + +++ LF+ + + D+ EM +GL PN TY L+
Sbjct: 498 RATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALI 557
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ G +A ++ +M E G++P+ C++L+ + G+ L+L+ + +
Sbjct: 558 AGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLAD 613
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +GF D FTY++++ + I + + M + + VTY S+++ L + +V
Sbjct: 673 KVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNV 732
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV+++ +++ K P ++Y + + EA + ++MI+ G+ P +TYT+L
Sbjct: 733 SRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTIL 792
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ L G EEA+++ +M E V P+ LI+ + G + I
Sbjct: 793 IHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAI 840
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 4/197 (2%)
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
I + ++ E + + + V+ L G V A N++E++K+K P +Y++
Sbjct: 627 IGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSS 686
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ + + A + EM+ L PN TY L+ L ++ A+ +F+K+Q G
Sbjct: 687 LIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKG 746
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADEND 258
+ P+ N LI+ CK G T + + M + + Y + L T +E
Sbjct: 747 ISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAI 806
Query: 259 SLLWQ-VHPQFSPEFIS 274
LL Q + P FI+
Sbjct: 807 KLLDQMIENNVDPNFIT 823
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 70/137 (51%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +++ ++ +S +F +Q KGI+ +A+TY +++ G+ A + ++M
Sbjct: 718 TYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKM 777
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ PT+ +YT + L ++EA + +MI+ + PN TY L++ R G
Sbjct: 778 IKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNM 837
Query: 188 EEALEIFSKMQEAGVQP 204
+ +++++M G+ P
Sbjct: 838 KAITKLYNEMHICGLLP 854
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAV 102
+ +A FN + +S+G + + TY T++D G K ++ + F+L Q+ +GI
Sbjct: 732 VSRAVSLFNKL-QSKGISPNAITYNTLID--GHCKDGNTTE-AFKLKQKMIKEGIQPTVF 787
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TYT ++H L G ++ A+ + ++M P ++Y ++ +K T +Y EM
Sbjct: 788 TYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847
Query: 163 IQRGLPPNCYT 173
GL P +T
Sbjct: 848 HICGLLPANWT 858
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 190/467 (40%), Gaps = 32/467 (6%)
Query: 31 WDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE 90
+D V VL + E A+ FF WV RS F H+R T+ +++I G A +++ + +
Sbjct: 2 FDHELVYNVLHSSKTSEHAFHFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 61
Query: 91 LMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLND 150
M +KG+ D + ++ G V +V ++++M+ TI SY A K++
Sbjct: 62 DMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRG 121
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
R + +M+ G+ P +T+ V++ +GK E A+ F M+ + PD N
Sbjct: 122 RYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYN 181
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSP 270
+I + + MK + + ++ + D+ D L V
Sbjct: 182 TMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM--K 239
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ-LDSAVIS 329
F + +A+ + T L+ L + + +L +MDK + D+++
Sbjct: 240 GFGTKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFM 287
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
+I +C D A + +++ + E Y LI K + K ++++++ +
Sbjct: 288 RLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEK 347
Query: 390 GHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKCTATYTALIG 436
L +H SA P+ A+K +L+ + Q TA T + G
Sbjct: 348 DIMLR---PQSTLHLEPSAHNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRG 404
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 405 -HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 450
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 135 SEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKME 194
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G PN TY+ L+
Sbjct: 195 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLL 254
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G +L+ M
Sbjct: 255 PGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAM----- 309
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F A + D + + + + + + P+
Sbjct: 310 -IRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQSTLHLEPSAHNPM- 367
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ L ++L+ +M +Q D ++T+I + D A +
Sbjct: 368 -----IEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 421
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 422 LRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDH 461
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 37 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 96
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G + + M +GI P+ TFNV++ G G
Sbjct: 97 KMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 156
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 157 KVETAIRFFEDMKS 170
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++D + + + V E M E G D +TYT+V++ G +D AV +
Sbjct: 356 DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 415
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M C P VSYT +K L +R +A ++ +MIQ+G PPN T+ L+ +L +
Sbjct: 416 RSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 475
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
G E+A+E+ +M G PD + + +I+ KAG T + +L M
Sbjct: 476 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVM 523
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 175/464 (37%), Gaps = 58/464 (12%)
Query: 26 NLPIKWDSYT---VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI 82
++P+ ++YT + + L + A + ++R RG Y L+ A
Sbjct: 104 SVPVAPNAYTYFPLVRALCARGRIADALAVLDDMAR-RGCAPTPPMYHVTLEAACRASGF 162
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTA 141
V + +G +D V+ + + G VD AV + ++ C P +VSY A
Sbjct: 163 RGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNA 222
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
++ L + R D+ +EM+ G PPN T++ L+ +L R G +E E+ ++M E G
Sbjct: 223 VLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHG 282
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
PD +I+ CK IL M L+ + L+ AD
Sbjct: 283 CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR----- 337
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
W+ + EG LL+ + DK
Sbjct: 338 WE---------------------EAEG-----------------------LLAEMFDKDC 353
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
LD + +++ C + D + E ++ + Y +I K +
Sbjct: 354 PLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 413
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVY 438
++ M G +++ L SA R V A ++ S + + Q C T+ LI
Sbjct: 414 LLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQ-QGCPPNPVTFNTLINFL 472
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G ++A+++ K M G P L +++ ++ GL K G +A
Sbjct: 473 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEA 516
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 134/336 (39%), Gaps = 22/336 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + + Y T+L A R + + M +K +D VT+ ++ +L G VD
Sbjct: 315 SYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVD 374
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + E+M C P +++YT + + EA + + M G PN +YT+++
Sbjct: 375 RVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVL 434
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L A ++ +A E+ S+M + G P+ N LI CK G I +L+ M N +
Sbjct: 435 KGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 494
Query: 239 ---LRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y + L DE LL V SP I + + I LS
Sbjct: 495 PDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTI--------IYSSIASALS--- 543
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ + + + I D +++ D+ + + +I C D A+ Y V
Sbjct: 544 -------GEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSS 596
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ Y LI L + EI+ E+ G
Sbjct: 597 GCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 176/471 (37%), Gaps = 61/471 (12%)
Query: 21 QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR---SRGFNHDRFTYTTMLDIFG 77
+DLL + + D + N VL+ M + W + + G + T++T++
Sbjct: 205 RDLLPSFGCEPDVVSYNAVLRGLC-MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLC 263
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ V M E G D Y +++ + ++ A I M P +V
Sbjct: 264 RNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVV 323
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
Y +K L DR +EA + EM + P + T+ +L+++L + G + +E+ +M
Sbjct: 324 CYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQM 383
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVA 254
E G PD +I CK G +++LR M + Y + + L + +
Sbjct: 384 LEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERW 443
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSL 312
+ + L+ Q+ Q P + V F T ++ L KK LV AI+ L
Sbjct: 444 VDAEELMSQMIQQGCPP-----NPVTFNT-------------LINFLCKKGLVEQAIE-L 484
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
L ++ D ST+I+ D AL VK ++ Y ++ L
Sbjct: 485 LKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSG 544
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT 432
KV ++ E + V A+L Y
Sbjct: 545 EGRINKVIQMFENI----QDTTVRSDAVL-----------------------------YN 571
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
A+I G D+A++ M G P+ T+ +L+ GL G V +A+
Sbjct: 572 AVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 622
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 156/396 (39%), Gaps = 48/396 (12%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F+ M + GI DA TY ++HWL + A+N+WE+M P IV+Y + +
Sbjct: 374 LFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+N + EA +Y EM +G PN TYT LM+ + +++A + ++M++ GV +
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
N LI C G + +L+ + + + F A S + V+ Q
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS-AFAVYQQ 551
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+ I N + T+ I+G + LK +L+ + K ++ D A
Sbjct: 552 MCAKGIPPN--IVTYTSFIDG--YCKTSCCDLALK---------MLNDVRCKGLRPDIAA 598
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++I C AL +K L + Y + I L + E+M
Sbjct: 599 YNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMI 658
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
K G L TATYT LI + G+ A
Sbjct: 659 KEGIDLD---------------------------------TATYTTLIDGFSKDGNVTFA 685
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LK+Y M KG P TF L GL + G + DA
Sbjct: 686 LKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 171/431 (39%), Gaps = 35/431 (8%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY ++ + ++I ++E M E G+ VTY S++ G +D AV ++
Sbjct: 385 DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLY 444
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM K P +V+YT MK +A + EM Q G+ N YTY L+ L
Sbjct: 445 TEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVV 504
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRY 241
G+ E E+ + + G P N +I KAG + + + M + + Y
Sbjct: 505 GRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTY 564
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
F + D +L V + P+ + N + EG +S +++++
Sbjct: 565 TSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQ--EGNMSHALQVLVLM 622
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
LK D LL I +V ++ I + + + AL +E +K ++L+
Sbjct: 623 LK-------DGLLPNI---------SVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDT 666
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL------GSARRPVPA 414
Y LI K ++ EM G+ L H L AR+ +
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ P Y LI Y G +A +++ M + I P T+++L+ G++
Sbjct: 727 MNRLDIRPN----VLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV-GMK 781
Query: 475 KLGRVS--DAE 483
LG S DAE
Sbjct: 782 SLGSDSPIDAE 792
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME+A F+ + + G + D TYTT++D F + ++ ++ M KG D +T+T
Sbjct: 647 MEEALRFYEKMIK-EGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFT 705
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ H L GD+D A + +EM + P ++ Y + N +++EA ++ EM++R
Sbjct: 706 ALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLER 765
Query: 166 GLPPNCYTYTVLM 178
+ P+ TY +L+
Sbjct: 766 KIMPDDTTYDILV 778
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 187/441 (42%), Gaps = 51/441 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF FT+ +++D+ + R+ ++ + + G + V T++MH +V A
Sbjct: 242 GFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKA 301
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++I+EE PT V+YT ++ ++A ++ ++M GL P+ + ++++
Sbjct: 302 LDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKG 361
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L+ +++A+ +F +M ++G+ PD NILI C+ + R + + M E +
Sbjct: 362 LLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420
Query: 241 YPVFKEALQTFKV---ADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPL---SID 293
+ L + V DE L ++ + F+P ++ TT ++G + + D
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVT-------YTTLMKGHINKAAFD 473
Query: 294 QGLVLILLKKKNLVAI-----DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA- 347
+ L+ K+N V+ ++L++G+ V+ + EV G +L
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGL---------CVVGRVCEV--------GEMLKR 516
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
FE + + Y ++I IK + ++M G + I
Sbjct: 517 FETEGFVPTAM---TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCK 573
Query: 408 ARRPVPAAKIFSLLPEDQKC------TATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
A K+ + D +C A Y +LI + G+ AL++ M + G+ P
Sbjct: 574 TSCCDLALKMLN----DVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLP 629
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
++ +N + G + L + +A
Sbjct: 630 NISVYNSFITGYKNLKMMEEA 650
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ GF TY ++++ F +A + S V++ M KGI + VTYTS + D
Sbjct: 519 TEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCD 578
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +++ K P I +Y + + + A V M++ GL PN Y +
Sbjct: 579 LALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
EEAL + KM + G+ D A LI+ K G
Sbjct: 639 TGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDG 680
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 165/452 (36%), Gaps = 54/452 (11%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D + T +L + + + + M+ KG +DA + VM G D
Sbjct: 135 ARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYD 194
Query: 119 GAVNIWEEMKLKECYP-TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV +++EM E P V A + L D A V ++M G P +T+ +
Sbjct: 195 DAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD-ANRALLVLRKMQDAGFVPWDFTFNSV 253
Query: 178 MEYLVRAGKYEE-----------------------------------ALEIFSKMQEAGV 202
++ LV+ G+ EE AL+IF + G+
Sbjct: 254 VDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGL 313
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
P +LI C + G + R M+++ L F ++ ND LW
Sbjct: 314 VPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL----NDK-LW 368
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ E ++D+ + T +I L+ L +++ + +L + + ++
Sbjct: 369 KDAVSLFKE-MADSGIPDAFTYNI---------LIHWLCQRRKIREALNLWEKMNETGVK 418
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+++ C + D A+ + Y L+ I F K +
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYAL 478
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFS 440
+ EM + G S Y LI+ L R ++ + TY ++I +
Sbjct: 479 LAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIK 538
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
AG A +Y+ MC KGI P++ T+ + G
Sbjct: 539 AGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 7/202 (3%)
Query: 18 DSAQDLLKNLPIKW---DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A L +P K + T ++K H +KA+ + + G + + +TY T
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEM-KQNGVSCNDYTYNT 496
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+++ R+ + + + + +G A+TY S+++ AG + A ++++M K
Sbjct: 497 LINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P IV+YT+++ A + ++ +GL P+ Y L+ + G AL
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHAL 616
Query: 192 EIFSKMQEAGVQPDKAACNILI 213
++ M + G+ P+ + N I
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFI 638
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D Y +++ F + +S V LM + G+ + Y S + N +
Sbjct: 588 RCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ +E+M + +YT + + V A +Y EM+ +G P+ T+T L
Sbjct: 648 EEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L R G ++A ++ +M ++P+ N+LI + G+ + + M E ++
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 10/159 (6%)
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I+ D V S I C R + ALL + +++ +L+K +
Sbjct: 208 IEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEAL 267
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTAL 434
I +E+ G + V L L+H R A IF L+P D TYT L
Sbjct: 268 HIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTD----VTYTVL 323
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
I G +KA ++ + M G+ PS FN+++ GL
Sbjct: 324 IRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/472 (20%), Positives = 188/472 (39%), Gaps = 24/472 (5%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++I +I +C D A + +++ + E Y LI K + K
Sbjct: 287 APTDNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAV 346
Query: 381 EIVEEMTKAG---------HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATY 431
++++++ + H +++ + + + + L+ +
Sbjct: 347 KLLDKLIEKDIILRPQSTLHLEPSAYNSMIEYLCNNGQASKAETLVRQLMKLGVQDPTAL 406
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI + GS D A ++ K M R+ + +N+L+ K DA+
Sbjct: 407 NTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAK 458
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 146/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G +L+ M
Sbjct: 263 PGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F A + D + + + + + D + + + S
Sbjct: 318 -IRLSVPTEAGHYGLLIENFCKAGQYDKAVKLL------DKLIEKDIILRPQSTLHLEPS 370
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
++ L ++L+ +M +Q D ++T+I + D A +
Sbjct: 371 AYNSMIEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY L+ +K N ++ M + H
Sbjct: 430 LRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDSMIENDH 469
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 185/466 (39%), Gaps = 34/466 (7%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQE 94
V V++ KA FN + + GF H TY ++++ G + +M+ V ++ Q
Sbjct: 10 VTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQN 69
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G ++ Y M G V AVN++E M +C PT+ SY A M IL + +
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQ 129
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A VY M RG+ P+ Y++T+ M+ R + AL + + M G + + A ++
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVAD--ENDSLLWQVHPQ-FSP 270
+ + M + ++L F + L K D E + LL +V + P
Sbjct: 190 GFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 271 EFISDNDAVEFVTTDIE--------GPLSIDQG----------LVLILLKKKNLVAIDSL 312
+ N ++ + E G L IDQG L+ L K +
Sbjct: 250 NLFTYNFFIQGLCQKGELDAAVRMVGRL-IDQGPKPDVVTYNYLIYGLCKNSKFQEAEVY 308
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
L ++++ ++ DS +T+I C A +V + Y +LI L
Sbjct: 309 LGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCH 368
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQK 426
+ + E G V L LI L + + AA++ S L+PE Q
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQ- 427
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
T+ L+ G A + K M KG P + TFN+L+ G
Sbjct: 428 ---TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 111/502 (22%), Positives = 185/502 (36%), Gaps = 96/502 (19%)
Query: 8 VYKILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGF 62
+Y + K S + A+ L L ++ DS+T N ++ + L + + GF
Sbjct: 293 IYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGF 352
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D FTY +++D + +F KGI + + Y +++ LSN G + A
Sbjct: 353 VPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQ 412
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ EM K P + ++ + L V +A + K MI +G P+ +T+ +L+
Sbjct: 413 LASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
K E ALEI M + GV PD N L+ CK + ++ + M E A
Sbjct: 473 TQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCA---- 528
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
L TF + E+ L + H +D+ L
Sbjct: 529 ---PNLFTFNILLES---LCRYH-------------------------KLDKAL------ 551
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
LL + +KS+ D+ T+I+ C + DGA F KM
Sbjct: 552 --------GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR---KM-------- 592
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
EE+ S Y ++IH A K+F +
Sbjct: 593 ---------------------EEVYMVSCSTPTY--NIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 423 EDQKCTA----TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ +C TY ++ + G+ D K M G PSL T ++ L R
Sbjct: 630 D--RCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 479 VSDAE--IYRKEKKSIQADALS 498
V +A I+R +K + +A++
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAVN 709
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 175/434 (40%), Gaps = 34/434 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D FTYT ML F + S VFE M+ G + T+ +++ N G
Sbjct: 203 RGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAE 262
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++EE+K+ C P IV++ + + N E + V+KEM + G P TY L+
Sbjct: 263 MMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLIS 322
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G +++A+ ++ +M + G+ PD + N ++ + G IL M++
Sbjct: 323 AYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKP 382
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
L + E +L A E + IE + + LVL+
Sbjct: 383 NELTHCSLLHAYANGKEIGRMLAL--------------AEEICSGVIEPHAVLLKTLVLV 428
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD-----GALLAFEYSVKM 354
K L+ + + K D + ++ +I + + RR +L F
Sbjct: 429 NSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAI---YGRRQMVTKTNEILNFMKESGF 485
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+L Y +L+ + + F + E+++E+ G + +I R A
Sbjct: 486 TPSL--ATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEA 543
Query: 415 AKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
+ IFS L+P+ TY + Y + ++A+ + M + G P+ T+N
Sbjct: 544 SHIFSEMRESGLIPD----VITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNS 599
Query: 469 LLAGLEKLGRVSDA 482
++ G KL R DA
Sbjct: 600 VIDGYCKLNRRDDA 613
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 180/454 (39%), Gaps = 75/454 (16%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++++ G+ ++S + + + G D YTS++ + G AV ++++M+ +
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 132 CYPTIVSYTAYMKILF-LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C PT+++Y + + + + T +++ M G+ P+ YTY L+ R YEEA
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEA 123
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
+F M+ G PDK N L++ K+ + I +LR M+ N
Sbjct: 124 AAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGC------------- 170
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
SP ++ N + D GL+ ++ KN
Sbjct: 171 ------------------SPSIVTYNSLISAYARD---------GLLEEAMELKN----- 198
Query: 311 SLLSGIMDKSIQLD----SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
++++ I+LD +A++S + D + A+ FE + AL
Sbjct: 199 ----QMVERGIKLDVFTYTAMLSGFVRTGKD----ESAMRVFEEMRTAGCKPNICTFNAL 250
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SL 420
I + F ++ ++ EE+ + L+ G + +F
Sbjct: 251 IKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGF 310
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+PE TY LI Y GS D+A+ +YK M GI P L T+N +LA L + G
Sbjct: 311 VPERD----TYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWE 366
Query: 481 DAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
+E E + D + K P E C LL+
Sbjct: 367 QSEKILAEMQ----DGMCK---PNELTHCSLLHA 393
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 7/185 (3%)
Query: 35 TVNQVLKTHPPMEKAW-----LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
T N +L + M W LF ++ G D +TY T++ VF
Sbjct: 70 TYNVILNVYGKMGMPWNKITGLFEGM--KNAGILPDEYTYNTLITCCRRGSLYEEAAAVF 127
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
E M+ G D VTY +++ + + A+ + EM++ C P+IV+Y + + +
Sbjct: 128 EDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARD 187
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
++EA ++ +M++RG+ + +TYT ++ VR GK E A+ +F +M+ AG +P+
Sbjct: 188 GLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTF 247
Query: 210 NILIE 214
N LI+
Sbjct: 248 NALIK 252
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +GF+ D T M+ I+G + ++ + M+E G TY S+M+ S + +
Sbjct: 446 KRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENF 505
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + + +E+ K P I+SY + N R+KEA+ ++ EM + GL P+ TY
Sbjct: 506 ERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTF 565
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ +EEA+++ M + G +P++ N +I+ CK
Sbjct: 566 VASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCK 606
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 1/202 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG-DVDG 119
GF D + YT+++ R VF+ M+E+G +TY +++ G +
Sbjct: 28 GFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNK 87
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
++E MK P +Y + +EA V+++M G P+ TY L++
Sbjct: 88 ITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLD 147
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
++ + +EA+E+ +M+ G P N LI + G + + M E + L
Sbjct: 148 VYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKL 207
Query: 240 RYPVFKEALQTFKVADENDSLL 261
+ L F +++S +
Sbjct: 208 DVFTYTAMLSGFVRTGKDESAM 229
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
A++I+ LG + AA + + L +D + YT+LI S G +A+ ++K M
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 457 KGIHPSLGTFNVLLAGLEKLG 477
+G P+L T+NV+L K+G
Sbjct: 62 EGCKPTLITYNVILNVYGKMG 82
>gi|242046988|ref|XP_002461240.1| hypothetical protein SORBIDRAFT_02g043430 [Sorghum bicolor]
gi|241924617|gb|EER97761.1| hypothetical protein SORBIDRAFT_02g043430 [Sorghum bicolor]
Length = 551
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 185/475 (38%), Gaps = 44/475 (9%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
DS + L+ L + D + VN+VL++ E A F+ W GF+H +F ++ +
Sbjct: 80 DSVELELERLHVDLDPFVVNRVLRSVSDSETAVQFYWWAESRPGFDHTQFAIAYIVSLLF 139
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ E ++ +G+ + Y ++ AG D + ++EM C V
Sbjct: 140 IDSNFFLLSEFLERVRSQGVTLHRSLYRILLSGYVRAGKFDSVIQTFDEMVTSGCREFGV 199
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
Y ++ +L N Y + +G +TY+ + L ++ + E + + M
Sbjct: 200 DYNRFIGVLVKNCCFDLVEKYYGVALDKGFCLTSFTYSRWISALCQSDRIELVERLLADM 259
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL---QTF 251
+ G PD ACNI ++ CK +++L M+ + Y L + F
Sbjct: 260 DKFGCFPDIWACNIYVDYLCKQNRLHDALMMLENMEMRGTGPDVVTYTTIVGCLCDNKQF 319
Query: 252 KVADENDSLLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
A E LW+ + P+ IS VLI KN + +
Sbjct: 320 AEAVE----LWEEMMRRGVKPDIISCG--------------------VLIFGLCKNHMEV 355
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
D + +I+ C ++ AL F+ + + Y LI
Sbjct: 356 GGF----------CDIVSCNILIDAFCKAKKVTSALKLFKEMGYKGIQADAVTYGTLING 405
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC-- 427
L + EI E+M KA V L +++H L A + A KIF + + +
Sbjct: 406 LYGVGYCNLAEEIFEQMLKAQVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPD 465
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T+ LI + A +A+ +++ M +G+ P TF L++GL + G+ + A
Sbjct: 466 VITFNTLIYWLGKSSRAIEAVDLFRDMRARGVEPDSLTFRYLISGLLEEGKATLA 520
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D + ++D F +AK+++S +F+ M KGI DAVTY ++++ L G + A I+
Sbjct: 360 DIVSCNILIDAFCKAKKVTSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYCNLAEEIF 419
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+M + P + Y + L + ++A ++ +MIQ+ + P+ T+ L+ +L ++
Sbjct: 420 EQMLKAQVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDVITFNTLIYWLGKS 479
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ EA+++F M+ GV+PD LI + G+ + YM EN + L
Sbjct: 480 SRAIEAVDLFRDMRARGVEPDSLTFRYLISGLLEEGKATLAYEVWEYMMENGIIL 534
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 25/173 (14%)
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH---- 391
C R AL+ E + Y ++G L F + E+ EEM + G
Sbjct: 279 CKQNRLHDALMMLENMEMRGTGPDVVTYTTIVGCLCDNKQFAEAVELWEEMMRRGVKPDI 338
Query: 392 -SLGVYLGAL------------------LIHRLGSARRPVPAAKIFSLLPED--QKCTAT 430
S GV + L LI A++ A K+F + Q T
Sbjct: 339 ISCGVLIFGLCKNHMEVGGFCDIVSCNILIDAFCKAKKVTSALKLFKEMGYKGIQADAVT 398
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y LI + G + A +I++ M + + P++ +N++L L K G+ A+
Sbjct: 399 YGTLINGLYGVGYCNLAEEIFEQMLKAQVVPNVNLYNIMLHNLCKAGQFEQAQ 451
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM--HWLSNAGD-------- 116
+T++ ++D F + ++ K VF +M ++ + + VTY S+M H L N
Sbjct: 223 YTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNT 282
Query: 117 ----VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
VD A+N++EEM K+ YP +V Y + + L + R A EM RG PP+ +
Sbjct: 283 MIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIF 342
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
TY L++ L + ++A+E+ +K+++ G+QP NILI CK+G +
Sbjct: 343 TYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLK 393
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 65 DRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
D Y +++D ++ R ++K++ E M +G D TY S++ L VD A+ +
Sbjct: 305 DMVIYNSLIDGLCKSGRTPYALKFIGE-MHYRGQPPDIFTYNSLLDALCKNYHVDKAIEL 363
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
++K + P++ +Y + L + R+K+A V+++++ +G + YTY +++ +
Sbjct: 364 LTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCK 423
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC------KAGETRTIILILRYMKE--- 234
G ++E L + SKM+++G PD C I+I KAG+ R +I+ + +E
Sbjct: 424 KGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGKFREMIVRGKCHREAPA 483
Query: 235 NRLALRYPVFKEALQTFKVADE--NDSLLWQ 263
+ + R+P+ V D N LWQ
Sbjct: 484 STIRKRHPLVTVIANRSTVVDRSFNGIDLWQ 514
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 155/365 (42%), Gaps = 37/365 (10%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA F + V ++GF ++ +Y T+++ + + + + K + D V Y
Sbjct: 98 IHKALHFHDKVV-AQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYN 156
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L V+ A N++ EM K P++V+Y + L + ++K+A + +MI
Sbjct: 157 TIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILE 216
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ P YT+++L++ + GK +EA +F+ M + V+P+ N L+ + +
Sbjct: 217 DINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLM-------DGHHL 269
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH-PQFSPEFISDNDAVEFVTT 284
+ +++ K +F + K+ DE +L ++H Q P+ + N ++ +
Sbjct: 270 VNVVKKAKS--------IFNTMI---KMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCK 318
Query: 285 DIEGPLSID-----------------QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
P ++ L+ L K ++ LL+ + D+ IQ
Sbjct: 319 SGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCT 378
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I C R A FE + N + Y A+I K F + +V +M
Sbjct: 379 YNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMK 438
Query: 388 KAGHS 392
+G S
Sbjct: 439 DSGCS 443
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 172/427 (40%), Gaps = 53/427 (12%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
F + +L +A S + + M+ G+ + VT + +++ S G + +++
Sbjct: 13 FEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFAN 72
Query: 127 MKLKECYPT-IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+ LK+ Y + +++T +K L L + +A + +++ +G N +Y L+ L + G
Sbjct: 73 I-LKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVG 131
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+ ALE ++ VQPD N +I+ CK + M R+ +
Sbjct: 132 QTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYN 191
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI-----EGPLSIDQGLVLIL 300
+ + + + +H + N V + I EG + + + ++
Sbjct: 192 TLICGLCIMAQLKDAIGLLHKMILEDI---NPTVYTFSILIDAFCKEGKMKEAKNVFAVM 248
Query: 301 LK---KKNLVAIDSLLSGI-MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+K K N+V +SL+ G + ++ ++ +T+I++ D A+ FE +
Sbjct: 249 MKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKM------VDEAMNLFEEMHFKQI 302
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y +LI L K P + + EM G ++
Sbjct: 303 YPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIF-------------------- 342
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
TY +L+ DKA+++ + +GI PS+ T+N+L+ GL K
Sbjct: 343 -------------TYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKS 389
Query: 477 GRVSDAE 483
GR+ DAE
Sbjct: 390 GRLKDAE 396
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 183/402 (45%), Gaps = 30/402 (7%)
Query: 24 LKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+++ I+ D T N +L + +E+A + F ++ S G D TY +++D F +
Sbjct: 179 MRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNES-GVVADAVTYKSLVDTFAGSN 237
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
++ ++ + M+++G D Y S++ ++AG+V GA ++++M+ C P + +Y+
Sbjct: 238 QLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYS 297
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
++I ++ ++ +M PP TY L++ G ++E++ +F M ++
Sbjct: 298 TLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDS 357
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDS 259
GV+PD A + L+ C + G TR I ++M N + ++ K+A D+
Sbjct: 358 GVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDA 417
Query: 260 LL--WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA----IDSLL 313
L+ +++ +S DA+ + +G L ++ G L + K A ++S++
Sbjct: 418 LVSYYRIREAGLDPQVSAYDAL--IQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVM 475
Query: 314 S-----GIMDKSI------------QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
G+ D+++ ++D T++ V CD + A F +
Sbjct: 476 EAYSKVGLHDEALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSK 535
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
Y L+ + ++ + + ++++EM AG V +G
Sbjct: 536 VPGARVYCLLLSLCVRRSKWDYATQLLDEMIAAGGLHQVVVG 577
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG-DVDGAVNIWE 125
+ +T +++ +G + + ++ M+++ + + +TY +V++ S G D +G +N++
Sbjct: 118 YAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACSKGGLDWEGLLNLFA 177
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+M+ + P +++Y + V++A V+K M + G+ + TY L++ +
Sbjct: 178 QMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSN 237
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+ E+ +M++ G PD A N LIE AG + + M+ A +
Sbjct: 238 QLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYS 297
Query: 246 EALQTFKVADENDSLLWQVHPQFS 269
L+ + N QV FS
Sbjct: 298 TLLRIYG----NQGCFEQVRSLFS 317
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A F ++ R + YT M+ I G + +FE M E + + +T++
Sbjct: 64 RALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTAL 123
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD------VYKE 161
++ G + ++++ MK ++ P +++Y LN K D ++ +
Sbjct: 124 INAYGRNGQYEASLHLLARMKKEQVEPNLITYNT-----VLNACSKGGLDWEGLLNLFAQ 178
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M G+ P+ TY L+ G E+A +F M E+GV D L++ + +
Sbjct: 179 MRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQ 238
Query: 222 TRTIILILRYMKE 234
+ +LR M++
Sbjct: 239 LGRVEELLREMED 251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 137/373 (36%), Gaps = 42/373 (11%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q+ P + YT+++ + R G E+ EIF M E V+ + A LI + G+
Sbjct: 75 QQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTALINAYGRNGQYE 134
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ---------VHPQFSPEFIS 274
+ +L MK+ ++ + L A L W+ H P+ I+
Sbjct: 135 ASLHLLARMKKEQVEPNLITYNTVLN----ACSKGGLDWEGLLNLFAQMRHEGIQPDLIT 190
Query: 275 DND--------------AVEFVTTDIEGPLS---IDQGLVLILLKKKNLVAIDSLLSGIM 317
N A+ F T + G ++ + LV L ++ LL +
Sbjct: 191 YNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREME 250
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
D+ D A +++IE D GA F+ + + Y L+ I F
Sbjct: 251 DEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFE 310
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATY 431
+V + +M V LI G + +F + P+D ATY
Sbjct: 311 QVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDD----ATY 366
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI--YRKEK 489
+AL+ V G +A KI++ M PSL L++ K+ DA + YR +
Sbjct: 367 SALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIRE 426
Query: 490 KSIQADALSKDAV 502
+ + DA+
Sbjct: 427 AGLDPQVSAYDAL 439
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 182/446 (40%), Gaps = 35/446 (7%)
Query: 51 LFFNWVSRSRG-FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMH 109
LF R G + D TYT ++D F ++ + + +M+ + + VTY+S++H
Sbjct: 173 LFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLH 232
Query: 110 WLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
L AGD+D A++++ M K C P +V+YT + L +V A + EM P
Sbjct: 233 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPA 292
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ +Y L++ R G+ EEA ++F +M PD+ L+ C A +L
Sbjct: 293 DTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLL 352
Query: 230 RYMKE----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
MK + + Y + VA + + + +F E I+ N A VT
Sbjct: 353 ENMKTAAGIDPDVVTYSIV--------VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY- 403
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
L+ L K + +L + DK D + +IE C R + AL
Sbjct: 404 --------SSLIDGLCKAGRVNHAMEVLKNV-DKP---DVVTYTIVIEGLCGTDRTEEAL 451
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
E V + + ++IG L +L + +++ M G G+ L+
Sbjct: 452 TLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGF 511
Query: 406 GSARRPVPAAKIFSLLPEDQKCTAT---------YTALIGVYFSAGSADKALKIYKTMCR 456
R A ++F ++ K +++ ++ALI A DKA+ + + +
Sbjct: 512 SRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRS 571
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ P+ ++ GL + GR +A
Sbjct: 572 RECEPAEEDCLAIVDGLLRAGRTEEA 597
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 193/466 (41%), Gaps = 38/466 (8%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIF---GEAKRISSMKYVFELMQEKGINIDAVTY 104
KA+ + + D TY+T+++ F GE R + + + E++ G+ D VTY
Sbjct: 27 KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDR--ACEILREMVTRDGMAPDVVTY 84
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
TSV+ L G +D A + EMKLK P +++A + +V EA +YKE++
Sbjct: 85 TSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILT 144
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ--EAGV-QPDKAACNILIEKCCKAGE 221
+ + + L+ L R + EA E+F +M+ E G +PD LI+ CK+G
Sbjct: 145 SSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGN 204
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+ +L M+ + + L A + D L S + + V
Sbjct: 205 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN---VVT 261
Query: 282 VTTDIEGPLS---IDQGLVLI-----LLKKKNLVAIDSLLSG----------------IM 317
TT I G + +D +L+ + V+ ++LL G +
Sbjct: 262 YTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMA 321
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFE-YSVKMDLNLERTAYLALIGILIKLNTF 376
KS D + ++ C+ R + A E ++ + Y ++ + F
Sbjct: 322 AKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRF 381
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIG 436
+ AE ++EM + + LI L A R A ++ + D+ TYT +I
Sbjct: 382 VEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV--DKPDVVTYTIVIE 439
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++AL + + M K + PS+GTFN ++ L +LG + +A
Sbjct: 440 GLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 189/443 (42%), Gaps = 62/443 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQE-KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY +++ +A+ S V + M++ K + D VTY++V++ G++D A I E
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 127 MKLKECY-PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
M ++ P +V+YT+ + L + ++ A ++ +EM +G+ P+ +T++ L+ A
Sbjct: 71 MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
K +EAL+++ ++ + + D + + LI C +E R+ Y +F+
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLC---------------RERRIGEAYELFQ 175
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK- 304
E + + W+ P+ ++ ++ G L ++ ++ +K
Sbjct: 176 E-------MEMREDGAWK------PDVVTYTALIDGFCKS--GNLEKAMKMLGVMEGRKC 220
Query: 305 --NLVAIDSLLSGI-----MDKSIQL-----------DSAVISTIIEVNCDHRRRDGALL 346
N+V SLL G+ +D+++ L + +T+I C + D A L
Sbjct: 221 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARL 280
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
+ + +Y AL+ +L + ++ +EM L+
Sbjct: 281 LMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFC 340
Query: 407 SARRPVPAAKIFSLLPEDQKCTA-------TYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+A R A L E+ K A TY+ ++ Y A +A + + M + +
Sbjct: 341 NASRLEEA----RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 396
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA 482
P+ T++ L+ GL K GRV+ A
Sbjct: 397 APNAVTYSSLIDGLCKAGRVNHA 419
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A + + G + D TY+ ++ + AKR + M + + +AVTY+
Sbjct: 345 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 404
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L AG V+ A+ + + + P +V+YT ++ L DR +EA + +EM+ +
Sbjct: 405 SLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ P+ T+ ++ L R G +EA ++ M G++P L+E + G
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 515
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 137/345 (39%), Gaps = 58/345 (16%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILIEKCCKAGETRTI 225
+ PN TY V++ L +A +A E+ +M++ V PD + +I CK GE
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
ILR M V ++ + +P+ ++ V+ + D
Sbjct: 65 CEILREM----------VTRDGM--------------------APDVVTYTSVVDGLCRD 94
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
+ +D+ ++ K K ++ D S +I C+ R+ D AL
Sbjct: 95 GK----MDRACEMVREMKL--------------KGVEPDKFTFSALITGWCNARKVDEAL 136
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT---KAGHSLGVYLGALLI 402
++ + L+ + ALI L + + E+ +EM V LI
Sbjct: 137 KLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALI 196
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ A K+ ++ E +KC TY++L+ AG D+AL +++ M KG
Sbjct: 197 DGFCKSGNLEKAMKMLGVM-EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 255
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS--IQADALSKDAV 502
P++ T+ L+ GL +V A + E + AD +S +A+
Sbjct: 256 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVT-- 103
M++AW ++ + G TYTT+L+ F R+ +FE+M+ K +
Sbjct: 482 MDEAWKLLVAMA-AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANL 540
Query: 104 -----YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
+++++ L A ++D A+ + EE++ +EC P A + L R +EA +
Sbjct: 541 VPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 600
Query: 159 YKEMIQRGL 167
+ + GL
Sbjct: 601 INSISKVGL 609
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 198/460 (43%), Gaps = 34/460 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEKA F+ + S G F T++ + + ++ +F+ E G+ +
Sbjct: 389 MEKALEFYKKM-ESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFICN 446
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ WL G +D A + +M+ + P +VSY M + A V+ M+++
Sbjct: 447 TILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEK 506
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET-RT 224
GL PN YTY++L++ + + LE+ ++M + ++ + +I CK G+T +
Sbjct: 507 GLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKA 566
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
L+ ++E R + + + F E D + + + IS N V T+
Sbjct: 567 RELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAV-AAYEEMCANGISPN--VITYTS 623
Query: 285 DIEGPLS---IDQGL-------------------VLI--LLKKKNLVAIDSLLSGIMDKS 320
++G +DQ L LI KK N+ + +L S ++++
Sbjct: 624 LMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEG 683
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
+ V +++I + AL ++ +K L + Y LI L+K +
Sbjct: 684 LNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILAS 743
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT--YTALIGVY 438
++ EM G + ++++ L + V K+F + ++ Y A+I +
Sbjct: 744 DLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 803
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ G+ D+A +++ M KGI P TF++L++G K+G+
Sbjct: 804 YREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--KVGK 841
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 182/426 (42%), Gaps = 53/426 (12%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M GI+++ V TS++ D+ A++++ +M+ + P V+++ ++ N
Sbjct: 329 MVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGE 388
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+++A + YK+M GL P+ + +++ ++ K+EEAL++F + E G+ + CN
Sbjct: 389 MEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFICNT 447
Query: 212 LIEKCCKAG------------ETRTI--------ILILRYMKENRLALRYPVFKEALQ-- 249
++ CK G E+R I ++L + ++ + L VF L+
Sbjct: 448 ILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKG 507
Query: 250 --------------TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
FK DE + L +V Q + I N V T I G + Q
Sbjct: 508 LKPNNYTYSILIDGCFKNHDEQNVL--EVVNQMTSSNIEVNGVV--YQTIINGLCKVGQ- 562
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K + L+A + I +K + ++II+ D A+ A+E
Sbjct: 563 ----TSKARELLA-----NMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANG 613
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
++ Y +L+ L K N + E+ +EM G L + LIH A+
Sbjct: 614 ISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESAS 673
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+FS L E+ Y +LI + + G+ AL +YK M + G+ LGT+ L+ GL
Sbjct: 674 ALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 733
Query: 474 EKLGRV 479
K G +
Sbjct: 734 LKEGNL 739
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 207/511 (40%), Gaps = 71/511 (13%)
Query: 30 KWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDI-------FGEAKRI 82
K D+ ++ +L E A F+NW RG D + ++ I +G A +
Sbjct: 69 KDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVTSPETYGRASDL 128
Query: 83 SSMKYV----------------FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
++YV + + G +++ + +++ S D AV+I +
Sbjct: 129 L-IRYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQ 187
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M P + + L + + EA ++Y M+ G+ + T +LM +R K
Sbjct: 188 MLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEK 247
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL--RYPVF 244
EALE+FS+ E G +PD ++ ++ CCK +LR MKE +L + +
Sbjct: 248 PAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYT 307
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV--TTDIEGPL-SIDQGLVLILL 301
L + K + D++ W+ E +SD ++ V T+ I G + D G L L
Sbjct: 308 SVILASVKQGNMEDAIRWK------DEMVSDGISMNVVAATSLITGHCKNNDLGSALDLF 361
Query: 302 KK-------KNLVAIDSLL-----SGIMDKSIQ---------LDSAV--ISTIIEVNCDH 338
K N V L+ +G M+K+++ L +V + TII+
Sbjct: 362 YKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKG 421
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLA--LIGILIKLNTFPKVAEIVEEMTKAGHSLGV- 395
++ + AL F+ S + L ++ ++ L K K E++ +M G V
Sbjct: 422 QKHEEALKLFDESFETGL---ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVV 478
Query: 396 -YLGALLIHRLGSARRPVPAAK-IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
Y +L H ++ + A+ +FS + E + TY+ LI F L++
Sbjct: 479 SYNNVMLAH---CRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVV 535
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M I + + ++ GL K+G+ S A
Sbjct: 536 NQMTSSNIEVNGVVYQTIINGLCKVGQTSKA 566
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 6/202 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGD 116
+G + + FTY T+ I+G + ++K F L+ E K IN D T+ ++ L G
Sbjct: 262 KGISPNVFTYNTL--IYGFC-IMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGK 318
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D A++++EEMK K +P IV+YT+ + L N ++ A + K+M ++G+ P+ Y+YT+
Sbjct: 319 IDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 378
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ L + G+ E A + F + G + N++I CKAG ++ + M+
Sbjct: 379 LLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKG 438
Query: 237 LALRYPVFKEALQTFKVADEND 258
FK + DEND
Sbjct: 439 CMPDAITFKTIICALFEKDEND 460
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG++ D T T++ I Y + + +G +D V+Y ++++ L AG+
Sbjct: 157 RGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKA 216
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +++ P +V YT + L N RV +A D+Y EMI +G+ PN +TY L+
Sbjct: 217 VARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIY 276
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
G +EA + ++M+ + PD NILI+ K G+ I + MK +
Sbjct: 277 GFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNM 334
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D YTT++ + KR+ ++ M KGI+ + TY ++++ G++ A ++
Sbjct: 232 DVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLL 291
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EMKLK P + ++ + L ++ EA +++EM + + PN TYT L++ L +
Sbjct: 292 NEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKN 351
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
E A+ + KM+E G+QPD + IL++ CK G
Sbjct: 352 HHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 388
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 94/187 (50%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
K L+F+ ++GF D+ +Y T+++ +A ++ + ++ + D V YT++
Sbjct: 180 KRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTI 239
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H L V A +++ EM +K P + +Y + + +KEA + EM + +
Sbjct: 240 IHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNI 299
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ YT+ +L++ L + GK +EA+ +F +M+ + P+ LI+ CK I
Sbjct: 300 NPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIA 359
Query: 228 ILRYMKE 234
+ + MKE
Sbjct: 360 LCKKMKE 366
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 132/340 (38%), Gaps = 24/340 (7%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A V+ +++RG P+ T L++ L G+ + AL K+ G Q D+ + LI
Sbjct: 147 AFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLIN 206
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSP 270
CKAGET+ + +LR ++ + + ++ + +V D D + SP
Sbjct: 207 GLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISP 266
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIST 330
+ N + G ++ NL SLL+ + K+I D +
Sbjct: 267 NVFTYNTLI--------------YGFCIM----GNLKEAFSLLNEMKLKNINPDVYTFNI 308
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I+ + D A+ FE ++ Y +LI L K + + + ++M + G
Sbjct: 309 LIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 368
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKAL 448
VY +L+ L R A + F L+ TY +I AG +
Sbjct: 369 IQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 428
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ M KG P TF ++ L + AE + +E
Sbjct: 429 DLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLRE 468
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 135/372 (36%), Gaps = 59/372 (15%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV + M L P + + L N ++K+ G+ PN T +L+
Sbjct: 77 AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
A +F+ + + G PD N LI+ C GE + + Y + +A
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRAL----YFHDKVVA- 191
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Q F++ D V + T L+
Sbjct: 192 ---------QGFQL-----------------------DQVSYGT------------LING 207
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K A+ LL + S++ D + +TII C ++R A + + ++
Sbjct: 208 LCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPN 267
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y LI + + ++ EM + VY +LI LG + A +F
Sbjct: 268 VFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFE 327
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
++ P TYT+LI ++A+ + K M +GI P + ++ +LL L
Sbjct: 328 EMKHKNMFPN----IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDAL 383
Query: 474 EKLGRVSDAEIY 485
K GR+ +A+ +
Sbjct: 384 CKGGRLENAKQF 395
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D ++YT +LD + R+ + K F+ + KG +++ TY +++ L AG
Sbjct: 365 KEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 424
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+++ +M+ K C P +++ + LF D +A +EMI RGL
Sbjct: 425 GDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 78/446 (17%), Positives = 158/446 (35%), Gaps = 85/446 (19%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
F + +L + K ++ +F+ Q G+ + T +++ + + A +++
Sbjct: 94 FHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFAN 153
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ + +P ++ +K L +K A + +++ +G + +Y L+ L +AG+
Sbjct: 154 ILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGE 213
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ + K++ V+PD +I CK N+
Sbjct: 214 TKAVARLLRKLEGHSVKPDVVMYTTIIHCLCK----------------NK---------- 247
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+V D D + SP + N + G ++ NL
Sbjct: 248 -----RVGDACDLYSEMIVKGISPNVFTYNTLI--------------YGFCIM----GNL 284
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
SLL+ + K+I D + +I+ + D A+ FE ++ Y +L
Sbjct: 285 KEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSL 344
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I L K + + + ++M + G VY
Sbjct: 345 IDGLCKNHHLERAIALCKKMKEQGIQPDVY------------------------------ 374
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
+YT L+ G + A + ++ + KG H ++ T+NV++ GL K G D
Sbjct: 375 ---SYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDV---M 428
Query: 487 KEKKSIQADALSKDAVPMEEKICDLL 512
K ++ DA+ + IC L
Sbjct: 429 DLKSKMEGKGCMPDAITFKTIICALF 454
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 41/185 (22%)
Query: 24 LKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
LKN I D YT N L +++A F + F + TYT+++D +
Sbjct: 296 LKN--INPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFP-NIVTYTSLIDGLCKNH 352
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+ + + M+E+GI D +YT ++ L G
Sbjct: 353 HLERAIALCKKMKEQGIQPDVYSYTILLDALCKGG------------------------- 387
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
R++ A ++ ++ +G N TY V++ L +AG + + +++ SKM+
Sbjct: 388 ----------RLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGK 437
Query: 201 GVQPD 205
G PD
Sbjct: 438 GCMPD 442
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 188/477 (39%), Gaps = 60/477 (12%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
AW + V RS G + +T M++ + ++I + K M+EKG+ D VTY +++
Sbjct: 342 AWEIYQEVVRS-GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 400
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSY----------------------------- 139
+ G ++ A + + M K P + +Y
Sbjct: 401 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 460
Query: 140 --TAYMKILFL----NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
TA IL + ND + +A ++ EM +G+ P+ +++ L+ L + G ++AL+
Sbjct: 461 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 520
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL---RYPVFKEALQT 250
F M+ AG+ PD ILI C+ G + + M E L Y L
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK 580
Query: 251 FKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
K+ E D L ++ + P+F + TT I G K N+
Sbjct: 581 EKMLSEADELFTEMTERGVFPDFYT-------FTTLING-----------YXKDGNMNKA 622
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+L ++ ++++ D +T+I+ C + + + + +Y LI
Sbjct: 623 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 682
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKC 427
+ + + +EM + G + ++ A V A + S LL
Sbjct: 683 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 742
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY LI + + D+A + M G+ P + T+NV+L G + GR+ +AE+
Sbjct: 743 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 799
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 151/356 (42%), Gaps = 27/356 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G D +++ ++ + + + F M+ G+ D V YT ++ G +
Sbjct: 491 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 550
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +EM + C +V+Y + L + EA +++ EM +RG+ P+ YT+T L+
Sbjct: 551 EALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 610
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
+ G +A+ +F M + ++PD N LI+ CK E + + M R+
Sbjct: 611 NGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 670
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ Y + E LW V F I+ N V+ + D
Sbjct: 671 PNHISYGILINGYCNMGCVSE-AFRLWDEMVEKGFEATIITCNTIVKGYCR-AGNAVKAD 728
Query: 294 QGLVLILLKK--KNLVAIDSLLSGI-----MDKSIQL-----DSAVISTIIEVNC----- 336
+ L +LLK + + ++L++G MD++ L +S ++ +I N
Sbjct: 729 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 788
Query: 337 --DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
R ++ L+ + ++ +N +R+ Y +LI + N + + +EM + G
Sbjct: 789 SRQGRMQEAELIMLKM-IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 843
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 167/411 (40%), Gaps = 51/411 (12%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ ++ + +A+++ F +++ KG+ + S++ L G VD A I++E
Sbjct: 289 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 348
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ + + + L N +++ +M ++G+ P+ TY L+ R G
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEA E+ M G++P N +I CK G +Y++ V E
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTG---------KYLRAK------GVLDE 453
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
L K+ D+ + + E +++ ++ E P QG+V +L
Sbjct: 454 ML---KIGMSPDTATYNI---LLVECCRNDNMMDAERIFDEMP---SQGVV------PDL 498
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
V+ +L+ G++ K+ LD AL F L + Y L
Sbjct: 499 VSFSALI-GLLSKNGCLDQ------------------ALKYFRDMKNAGLAPDNVIYTIL 539
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
IG + + ++ +EM + G L V +++ L + A ++F+ + E
Sbjct: 540 IGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599
Query: 427 CTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
T+T LI Y G+ +KA+ +++ M ++ + P + T+N L+ G K
Sbjct: 600 FPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 650
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF T T++ + A M KGI D +TY ++++ ++D
Sbjct: 702 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 761
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M+ P +++Y + R++EA + +MI+RG+ P+ TYT L+
Sbjct: 762 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 821
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPD 205
V +EA + +M + G PD
Sbjct: 822 GHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 143/377 (37%), Gaps = 76/377 (20%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLP------------PNCYTYTVLMEYL 181
++ S++A + IL + R+ +A V M+++ G+ NC + ++ + L
Sbjct: 235 SLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLL 294
Query: 182 VR----AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
VR A K E E F ++ G+ ACN L+ K G
Sbjct: 295 VRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV--------------- 339
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
L W+++ E + V T +I ++
Sbjct: 340 ---------------------DLAWEIYQ----EVVRSGVQVNVYTLNI---------MI 365
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL-AFEYSVKMD- 355
L K + + S LS + +K + D +T+I C R G L AFE M
Sbjct: 366 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC----RQGLLEEAFELMDSMSG 421
Query: 356 --LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
L Y A+I L K + + +++EM K G S +L+ +
Sbjct: 422 KGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD 481
Query: 414 AAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
A +IF +P +++ALIG+ G D+ALK ++ M G+ P + +L+
Sbjct: 482 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 541
Query: 472 GLEKLGRVSDAEIYRKE 488
G + G +S+A R E
Sbjct: 542 GFCRNGVMSEALKVRDE 558
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 87/156 (55%)
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
R + +L F A ++ F M+++ ID VTYT+V+H AG+V A ++
Sbjct: 199 RGRFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFN 258
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
EM + P++ +Y A++++L D V+ A V++EM+++G PN TY V++ L G
Sbjct: 259 EMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVG 318
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ E+A+E ++M++ +P+ N++I C A E
Sbjct: 319 RMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEE 354
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++AW FF + + R D TYTT++ FG A + + VF M +G+ TY
Sbjct: 215 LKEAWEFFLQMKK-RKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYN 273
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ + L +V+ A++++EEM K P +Y ++ L R+++A + M
Sbjct: 274 AFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDD 333
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
PN Y V++ Y A + E+ L +F KM +A P+ NILI
Sbjct: 334 ECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILI 381
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 33/240 (13%)
Query: 24 LKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
L+ P++W V++VLK H P KA FF + + H ++ +DI G +
Sbjct: 58 LEKYPVEWTPNLVDRVLKLLWNHGP--KALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLR 115
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
++ + + M+ + + + T+ + +AG D A+ I+ M C + S+
Sbjct: 116 DYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFN 175
Query: 141 AYMKILFLNDRV----------------------------KEATDVYKEMIQRGLPPNCY 172
+ +L + RV KEA + + +M +R +
Sbjct: 176 TILDVLCKSKRVEMADNKLFKVFRGRFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVV 235
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TYT ++ AG+ +A +F++M GV P A N I+ CK I + M
Sbjct: 236 TYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEM 295
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
QVL +E A F + R +G+ + TY ++ R+ M++
Sbjct: 277 QVLCKKDNVENAISVFEEMLR-KGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDEC 335
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL---NDRVKE 154
+ Y V+ + +A +++ +N++E+M +C P + +Y + +F+ +D +
Sbjct: 336 EPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLT 395
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
A + EM++RG P +T+ +++ L+ G + A EI G P +
Sbjct: 396 AGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQDFAKEILRLQSRCGRLPRR 447
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 17/165 (10%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D +TI++V C +R E + + R + L+ + + E
Sbjct: 170 DLNSFNTILDVLCKSKR-------VEMADNKLFKVFRGRFRILLKGFFRAGQLKEAWEFF 222
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCTATYTALIGV 437
+M K + V ++H G A A ++F+ +LP ATY A I V
Sbjct: 223 LQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPS----VATYNAFIQV 278
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ + A+ +++ M RKG P+ T+NV++ GL +GR+ A
Sbjct: 279 LCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKA 323
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 196/464 (42%), Gaps = 54/464 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FN + F +D TY+ ++D F + ++ + M E GI Y+
Sbjct: 371 LDEAESLFNNMGHKGLFPND-VTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ G + A ++++EM P +V YT+ + + A +Y EM +
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN YT+T L+ L A + EA ++F +M E V P++ N+LIE CK G T
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549
Query: 226 ILILRYMKENRLA----LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+L M E L P+ T +V++ + EF++D +
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE-------------AREFMNDLQGEQQ 596
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS-----GIMDKSIQLDSAVISTIIEVN- 335
+IEG L N+V +L++ G+MDK+ L ++++ N
Sbjct: 597 KLNEIEGCL-------------PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 643
Query: 336 ----C--DHRRRDGALLAFEYSVKM-DLNLE-----RTAYLALIGILIKLNTFPKVAEIV 383
C D+ +G + E ++++ D+ LE Y LI KL + AE++
Sbjct: 644 NTYACFLDYLTSEGNI---EKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVL 700
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPED-QKCTATYTALIGVYFSA 441
M +G S + +I+ A K++ S+L T Y LI
Sbjct: 701 VNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVT 760
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
G KA ++ M R+G+ P+ T+N L+ G + VS Y
Sbjct: 761 GELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADY 804
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 170/417 (40%), Gaps = 32/417 (7%)
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
++F+ + G+ D YT+V+ L D A + M+ C ++ +Y +++ L
Sbjct: 201 HLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGL 260
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
N RV EA ++ + +GL + TY L+ L + ++E E+ ++M E G P +
Sbjct: 261 CKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSE 320
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQ 263
AA + L++ K G + ++ +K+ +A V+ + + DE +SL
Sbjct: 321 AAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNN 380
Query: 264 V-HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ H P D+ + ID K+ L L + + I+
Sbjct: 381 MGHKGLFP-------------NDVTYSILIDS-----FCKRGKLDVALHFLGKMTEVGIK 422
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
S++I +C + A F+ + L Y +LI K +
Sbjct: 423 ATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIG 436
EMT G S Y LI L A R A K+F +++P + TY LI
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE----VTYNVLIE 538
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
+ G+ +A ++ M KG+ P T+ L++GL GRVS+A + + + Q
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQ 595
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/437 (19%), Positives = 173/437 (39%), Gaps = 33/437 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY T++ + + + + + M E G ++++ L G++
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ ++K P++ Y A + + + ++ EA ++ M +GL PN TY++L++
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ GK + AL KM E G++ + LI CK G+ R + M N L
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
++ + + E + ++++ + + + IS N T I G
Sbjct: 459 NVVIYTSLISGYCKEGELHN-AFRLYHEMTGKGISPNTYT--FTALISG----------- 504
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + + L +++ ++ + + +IE +C A + V+ L +
Sbjct: 505 LCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPD 564
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL--------LIHRL------ 405
Y LI L + E + ++ L G L LI+ L
Sbjct: 565 TYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLM 624
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
A + LP TY + S G+ +KA++++ + +G + T
Sbjct: 625 DKAELLCREMLASNSLPNQN----TYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVT 679
Query: 466 FNVLLAGLEKLGRVSDA 482
+N+L+ G KLGR+ +A
Sbjct: 680 YNILIRGFCKLGRIQEA 696
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 174/462 (37%), Gaps = 51/462 (11%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK--------------RISSMKYVFELMQE 94
A FFN++ + F+H ++ ++ ++ R + + +FE +
Sbjct: 76 ALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLD 135
Query: 95 KGINIDAVTYTS----VMHWLSNAGDVDGAVNIWEEMKLKEC--YPTIVSYTAYMKILFL 148
+ T + ++ N ++DG V + M +C P I + + + L
Sbjct: 136 SYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMM---DCGILPQIRTLSGVLNGLIR 192
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ + A ++ E++ GL P+ Y YT ++ L + A E+ +M+ +G A
Sbjct: 193 IRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVAT 252
Query: 209 CNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
N+ I CK E I +L Y Y L + + + ++
Sbjct: 253 YNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM---- 308
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
N+ +EF E +S LV L KK N+ + L++ + +
Sbjct: 309 ----------NEMIEFGFVPSEAAVS---NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
V + +I C + D A F L Y LI K + +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 386 MTKAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFS 440
MT+ G VY + LI +LG R A +F + + + YT+LI Y
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLR---AAKSLFDEMIANGLKPNVVIYTSLISGYCK 472
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G A ++Y M KGI P+ TF L++GL R+++A
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 193/454 (42%), Gaps = 25/454 (5%)
Query: 18 DSAQDLLKNLPIKWDS---YTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
+ A +L+ +P K S YT N V+ H E+A F + RS G + D TY +
Sbjct: 277 EEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRS 335
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + + +F M+ + + D V ++S+M + +G++D A+ + +K
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P V YT ++ + EA ++ EM+Q+G + TY ++ L + EA
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
++F++M E G+ PD ILI+ CK G + + + + MKE R+ L + L F
Sbjct: 456 KLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGF 515
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
+ D+ + E +D + E + T I + LV L K +L
Sbjct: 516 GKVGDIDT---------AKEIWADMVSKEILPTPISFSI-----LVNALCSKGHLSEAFR 561
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+ ++ KSI+ + +++I+ C + E + + +Y LI +
Sbjct: 562 VWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFV 621
Query: 372 KLNTFPKVAEIVEEM--TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKC 427
K K +V++M + G V+ ++H + A + + E
Sbjct: 622 KEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPD 681
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
+TYT+LI + S + +A + + M ++G P
Sbjct: 682 RSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 172/437 (39%), Gaps = 30/437 (6%)
Query: 58 RSRGFNHDRFTYTTMLD----IFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHW 110
RS+G YT +D + G RI ++ + + QE G+ ++ T +++
Sbjct: 182 RSKG-------YTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNA 234
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L G ++ E++ K YP IV+Y + ++EA ++ M +G P
Sbjct: 235 LCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPG 294
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
YTY ++ L + GKYE A E+F++M +G+ PD L+ + CK G+ I
Sbjct: 295 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFS 354
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
M+ + F + F + D L + I DN T I+G
Sbjct: 355 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN---VIYTILIQG-- 409
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+K + +L + ++ + +D +TI+ C + A F
Sbjct: 410 ---------YCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ L + LI KL E+ ++M + L V L+ G
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520
Query: 411 PVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A +I++ + + +++ L+ S G +A +++ M K I P++ N
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580
Query: 469 LLAGLEKLGRVSDAEIY 485
++ G + G SD EI+
Sbjct: 581 MIKGYCRSGNASDGEIF 597
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 172/437 (39%), Gaps = 58/437 (13%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ ++ F +A+++ F L++ KG + +++ L G V+ A I++E+
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ + + L + ++++ E+ ++G+ P+ TY L+ G E
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA E+ M G P N +I CK G +Y + VF E L
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHG---------KYERAKE------VFAEML 322
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
++ SP D+ + + L++ KK + V
Sbjct: 323 RS----------------GLSP------DSTTY------------RSLLMEACKKGDAVE 348
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+++ S + + + D S+++ + D AL+ F + L + Y LI
Sbjct: 349 TENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 408
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
+ + + EM + G ++ V ++H L + A K+F+ + E
Sbjct: 409 GYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFP 468
Query: 429 ATY--TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
+Y T LI + G+ A++++K M K I + T+N LL G K+G + A
Sbjct: 469 DSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTA---- 524
Query: 487 KEKKSIQADALSKDAVP 503
K I AD +SK+ +P
Sbjct: 525 ---KEIWADMVSKEILP 538
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+M+ + + S + E M +G D ++Y ++++ ++ A + ++M+
Sbjct: 579 NSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEE 638
Query: 130 KE--CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K+ P + +Y + + +++KEA V ++MI+RG+ P+ TYT L+ V
Sbjct: 639 KQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNL 698
Query: 188 EEALEIFSKMQEAGVQPD 205
EA +M + G PD
Sbjct: 699 TEAFRFHDEMLQRGFSPD 716
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 26/244 (10%)
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS-IQLDSAVISTIIEVNCDHRRRDGALL 346
G LS Q VL ++++ + ++ + S + S + +V +I R+ A
Sbjct: 117 GRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYE 176
Query: 347 AFE------YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
AF Y+V +D A ALIG L+++ I +E++++G + VY +
Sbjct: 177 AFTLLRSKGYTVSID------ACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNI 230
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALKIYKTMC 455
+++ L + K+ + L E Q+ TY LI Y S G ++A ++ M
Sbjct: 231 MVNALCKDGK---MEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMP 287
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
KG P + T+N ++ GL K G+ A E++ + +S LS D+ + +
Sbjct: 288 SKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS----GLSPDSTTYRSLLMEACKK 343
Query: 515 GDGV 518
GD V
Sbjct: 344 GDAV 347
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 188/477 (39%), Gaps = 60/477 (12%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
AW + V RS G + +T M++ + ++I + K M+EKG+ D VTY +++
Sbjct: 81 AWEIYQEVVRS-GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 139
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSY----------------------------- 139
+ G ++ A + + M K P + +Y
Sbjct: 140 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 199
Query: 140 --TAYMKILFL----NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
TA IL + ND + +A ++ EM +G+ P+ +++ L+ L + G ++AL+
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL---RYPVFKEALQT 250
F M+ AG+ PD ILI C+ G + + M E L Y L
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319
Query: 251 FKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
K+ E D L ++ + P+F + TT I G K N+
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYT-------FTTLING-----------YSKDGNMNKA 361
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
+L ++ ++++ D +T+I+ C + + + + +Y LI
Sbjct: 362 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 421
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKC 427
+ + + +EM + G + ++ A V A + S LL
Sbjct: 422 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 481
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY LI + + D+A + M G+ P + T+NV+L G + GR+ +AE+
Sbjct: 482 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 538
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 151/356 (42%), Gaps = 27/356 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G D +++ ++ + + + F M+ G+ D V YT ++ G +
Sbjct: 230 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 289
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +EM + C +V+Y + L + EA +++ EM +RG+ P+ YT+T L+
Sbjct: 290 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 349
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
+ G +A+ +F M + ++PD N LI+ CK E + + M R+
Sbjct: 350 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 409
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ Y + E LW V F I+ N V+ + D
Sbjct: 410 PNHISYGILINGYCNMGCVSE-AFRLWDEMVEKGFEATIITCNTIVKGYCR-AGNAVKAD 467
Query: 294 QGLVLILLKK--KNLVAIDSLLSGI-----MDKSIQL-----DSAVISTIIEVNC----- 336
+ L +LLK + + ++L++G MD++ L +S ++ +I N
Sbjct: 468 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 527
Query: 337 --DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
R ++ L+ + ++ +N +R+ Y +LI + N + + +EM + G
Sbjct: 528 SRQGRMQEAELIMLKM-IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 582
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 167/411 (40%), Gaps = 51/411 (12%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ ++ + +A+++ F +++ KG+ + S++ L G VD A I++E
Sbjct: 28 LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ + + + L N +++ +M ++G+ P+ TY L+ R G
Sbjct: 88 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEA E+ M G++P N +I CK G +Y++ V E
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTG---------KYLRAK------GVLDE 192
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
L K+ D+ + + E +++ ++ E P QG+V +L
Sbjct: 193 ML---KIGMSPDTATYNI---LLVECCRNDNMMDAERIFDEMP---SQGVV------PDL 237
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
V+ +L+ G++ K+ LD AL F L + Y L
Sbjct: 238 VSFSALI-GLLSKNGCLDQ------------------ALKYFRDMKNAGLAPDNVIYTIL 278
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
IG + + ++ +EM + G L V +++ L + A ++F+ + E
Sbjct: 279 IGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338
Query: 427 CTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
T+T LI Y G+ +KA+ +++ M ++ + P + T+N L+ G K
Sbjct: 339 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 389
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF T T++ + A M KGI D +TY ++++ ++D
Sbjct: 441 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 500
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M+ P +++Y + R++EA + +MI+RG+ P+ TYT L+
Sbjct: 501 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 560
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPD 205
V +EA + +M + G PD
Sbjct: 561 GHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 122/329 (37%), Gaps = 63/329 (19%)
Query: 170 NCYTYTVLMEYLVR----AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
NC + ++ + LVR A K E E F ++ G+ ACN L+ K G
Sbjct: 22 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV--- 78
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
L W+++ E + V T +
Sbjct: 79 ---------------------------------DLAWEIYQ----EVVRSGVQVNVYTLN 101
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I ++ L K + + S LS + +K + D +T+I C R G L
Sbjct: 102 I---------MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC----RQGLL 148
Query: 346 L-AFEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
AFE M L Y A+I L K + + +++EM K G S +L
Sbjct: 149 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ + A +IF +P +++ALIG+ G D+ALK ++ M G+
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 268
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
P + +L+ G + G +S+A R E
Sbjct: 269 APDNVIYTILIGGFCRNGVMSEALKVRDE 297
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 188/442 (42%), Gaps = 23/442 (5%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F+Y ++ + + S VF+ M + G+ + +TY +++ GD++ +
Sbjct: 15 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M P IV+Y + L R+ E + EM + P+ +TY++L + L R
Sbjct: 75 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ L +F++ + GV C+IL+ CK G+ +L + L ++
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194
Query: 245 KEALQTF-KVADENDS--LLWQVHPQ-FSPEFISDNDAV------EFVT----------- 283
+ + +V D + + Q+ + P+ I+ N + E VT
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+ ++ + L+ L ++LS + K I+ D ++++ C + +
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+ + + D+ Y ++I I+ + +VE+M +G S + LL+
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 374
Query: 404 RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L + + A ++ L + +Y +I + G DKAL++ + M + GI P
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434
Query: 462 SLGTFNVLLAGLEKLGRVSDAE 483
+L T++ L++ L GRV D E
Sbjct: 435 TLRTYHTLVSALASAGRVHDME 456
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 161/414 (38%), Gaps = 65/414 (15%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P SY + L+ + + +A V+ EM+ G+ PN TY +++ V+ G E +
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQT 250
+M G +P+ N+L+ C+AG +++ M + + Y + + L
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
E+ ++L E + + T I L+ L K + +
Sbjct: 134 ---TGESRTML-----SLFAESLKKGVMLGAYTCSI---------LLNGLCKDGKVAKAE 176
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+L ++ + + + +T+I C R GA FE + + Y ALI L
Sbjct: 177 QVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 236
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK---- 426
KL K ++V EM K+G V LI G+A + K F++L + Q+
Sbjct: 237 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ---LEKCFTVLSDMQQKGIK 293
Query: 427 -------------C-----------------------TATYTALIGVYFSAGSADKALKI 450
C Y ++I Y +G ++A +
Sbjct: 294 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 353
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
+ M G+ S+ T+N+LL GL + ++ +AE IY + ++ D +S + +
Sbjct: 354 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 407
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 103/245 (42%), Gaps = 36/245 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T++D +G A ++ V MQ+KGI D +++ SV+ G + AV I ++M
Sbjct: 263 TFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM 322
Query: 128 KLKECYP-----------------------------------TIVSYTAYMKILFLNDRV 152
K+ P +IV+Y +K L + ++
Sbjct: 323 IYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQI 382
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EA ++ + +GL P+ +Y ++ G ++ALE+ +M + G++P + L
Sbjct: 383 DEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTL 442
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
+ AG + + + M + ++ + + V ENDS + + + S +
Sbjct: 443 VSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY-VRCENDSKVASLKKEMSEKG 501
Query: 273 ISDND 277
I+ +D
Sbjct: 502 IAFDD 506
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 183/450 (40%), Gaps = 67/450 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +Y +++ R+ + +V M ++G ++D VTY +++ G+
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + EM P++++YT+ + + + AT+ +M RGL PN TYT L++
Sbjct: 329 ALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVD 388
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G EA + +M + G P N LI C AG+ I +L MKE L
Sbjct: 389 GFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL-- 446
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+P+ +S V + +D+ L +
Sbjct: 447 -----------------------------TPDVVS----YSTVLSGFCRSYDVDEALRV- 472
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K+ +VA K I+ D+ S++I+ C+ RR A F+ +++ L +
Sbjct: 473 ---KRKMVA----------KGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPD 519
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y ALI K ++ EM + G V ++LI+ L R A ++
Sbjct: 520 EFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLL 579
Query: 420 LL------PED-------QKCT----ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L P D + C+ + +LI + G +A +++++M K P
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPD 639
Query: 463 LGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
+NV++ G + G + A +Y++ KS
Sbjct: 640 GTAYNVMIHGHCRGGDIRKAYSLYKEMVKS 669
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 172/423 (40%), Gaps = 30/423 (7%)
Query: 88 VFELMQEKGINIDAVTYTSVMH-WLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ L Q G ++Y +V+ + + ++ A N+++EM + P + +Y ++
Sbjct: 156 IVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGF 215
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
L + A + M ++G PN TY L++ + K ++ E+ M G++P+
Sbjct: 216 CLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNL 275
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQ-- 263
+ N++I C+ G + I +L M + +L + ++ + K + + +L+
Sbjct: 276 ISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 264 -VHPQFSPEFIS-------------DNDAVEFV-TTDIEGPLSIDQ---GLVLILLKKKN 305
+ SP I+ N A EF+ + G ++ LV +K
Sbjct: 336 MLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+ +L ++D + +I +C + A+ E + L + +Y
Sbjct: 396 MNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYST 455
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL----- 420
++ + + + +M G + LI RR A +F
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
LP D+ TYTALI Y G KA++++ M KG+ P + T++VL+ GL K R
Sbjct: 516 LPPDE---FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTR 572
Query: 481 DAE 483
+A+
Sbjct: 573 EAK 575
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 6/205 (2%)
Query: 32 DSYTVNQVLKTHPPMEKA----WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
D +T N ++ H KA LF V + GF D TY ++L F + + +++
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFGELVEK--GFMPDAVTYNSLLYAFAKEGNVDKVEH 384
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
E + + G + +TY +++H G +D AV +++EM+ C P V+YT + L
Sbjct: 385 TCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLG 444
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
D++ EA V ++M GL P ++ L+ + G+ +A + F M +GV+PD+
Sbjct: 445 KMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRL 504
Query: 208 ACNILIEKCCKAGETRTIILILRYM 232
A ++++ ++GET ++ + R M
Sbjct: 505 AYLVMLDVFARSGETEKMLRLYRTM 529
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + TY TM+ ++G+ R+ +++ M+ G DAVTYT ++ L + A
Sbjct: 393 GFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEA 452
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ E+M PT+V+++A + R +A + MI G+ P+ Y V+++
Sbjct: 453 GKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDV 512
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
R+G+ E+ L ++ M +PD +L+ K + I I++ M+
Sbjct: 513 FARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDME 565
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISS---MKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
RG + D ++ T+++ ++ +++ + +FE+ Q G+ D +TY +++ S + +
Sbjct: 250 RGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ-SGLRPDVITYNTLISACSQSSN 308
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ AV ++EEM EC P + +Y A + + + +EA ++ E++++G P+ TY
Sbjct: 309 LEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNS 368
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L+ + G ++ ++ +AG + ++ N +I K G
Sbjct: 369 LLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMG 412
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/441 (19%), Positives = 166/441 (37%), Gaps = 69/441 (15%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F W++RS +L + G A++ S + VF +G + + ++M +
Sbjct: 177 FEWLARSTAPASR--AVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQ--VFNAMMGVYA 232
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE-------ATDVYKEMIQR 165
+G D A + + M + P +VS+ +N R K A D+ E+ Q
Sbjct: 233 RSGRFDDARQLLDTMHDRGIDPDLVSFNT-----LINARSKSGCLAAGVALDLLFEVRQS 287
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ TY L+ ++ E+A+ +F +M + +PD N ++ + G+
Sbjct: 288 GLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGK---- 343
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTT 284
A+E + L + V F P+ ++ N
Sbjct: 344 ----------------------------AEEAERLFGELVEKGFMPDAVTYN-------- 367
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
L+ K+ N+ ++ ++ + + +T+I + R D A
Sbjct: 368 ----------SLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLA 417
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
+ ++ + + Y +I L K++ + +++E+M AG + + LI
Sbjct: 418 VGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICA 477
Query: 405 LGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
R A K F + + Y ++ V+ +G +K L++Y+TM P
Sbjct: 478 YAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPD 537
Query: 463 LGTFNVLLAGLEKLGRVSDAE 483
+ VLL L K + + E
Sbjct: 538 DDMYQVLLVALAKEDKCEEIE 558
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R+ + V +Q+ I T ++ + AGDV + I+ MK P + Y
Sbjct: 830 RLDELYVVVGELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYR 889
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ +L ++R ++ + EM G P+ + L+ AG ++ +++ + EA
Sbjct: 890 SMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEA 949
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
G++PD+ N LI C++ +L M + L + +K L
Sbjct: 950 GLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLL 997
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 80/177 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D + ++L+++ A V++ + E G+ D TY +++ + +
Sbjct: 915 GFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEG 974
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM + P + SY + + + ++A +++EM + N Y ++M+
Sbjct: 975 FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
AG + +A + + M+E G++P A +IL+ AG+ +L +K + L
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSL 1091
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+ + N + + RG +Y ++L +A+ +FE M+ K ++ Y
Sbjct: 972 EEGFTLLNEMGK-RGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHM 1030
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M NAG+ A N+ MK PTI + M + EA +V +
Sbjct: 1031 MMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSS 1090
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L + Y+ + + ++ G Y+ ++ +M+ GV+PD I +T I
Sbjct: 1091 LEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAI 1150
Query: 227 LILRYMKE 234
L+L+ +++
Sbjct: 1151 LLLKSLQD 1158
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 80/178 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G+ + Y +M + R ++ + M+ G D + S+++ + AG+
Sbjct: 877 KAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNF 936
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D +++ + P +Y + + + R +E + EM +RGL P +Y L
Sbjct: 937 DRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSL 996
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ +A E+A ++F +M+ Q +++ +++++ AG +L MKE+
Sbjct: 997 LAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKED 1054
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 76/193 (39%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F + T MLD F +A + + ++ M+ G + Y S+ L +
Sbjct: 846 FKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVE 905
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EM+ P + + + + + T VY+ +++ GL P+ TY L+
Sbjct: 906 LMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMY 965
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
R+ + EE + ++M + G+ P + L+ KA + M+ L
Sbjct: 966 CRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNR 1025
Query: 242 PVFKEALQTFKVA 254
++ ++ ++ A
Sbjct: 1026 SIYHMMMKIYRNA 1038
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/469 (20%), Positives = 197/469 (42%), Gaps = 41/469 (8%)
Query: 46 MEKAWLFFNWVSRS--RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVT 103
++KA F+ +S+S R F+ D Y + + R + + M +G ++ + T
Sbjct: 25 IDKAVQVFDEMSQSNCRVFSID---YNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFT 81
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
Y+ + L + + +M+ C P I ++ Y+ +LF+ R+ A +V+++++
Sbjct: 82 YSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIV 141
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ G P+ TYT+++ + + K++ A++ + M G PD AC ++ C +
Sbjct: 142 KNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVD 201
Query: 224 TII-LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF------SPEFISDN 276
LI+ MK R+ L V+ + F A D Q F P+ ++ N
Sbjct: 202 LAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKA--QAIKSFMRRNGCEPDLVTYN 259
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKK-----NLVAIDSLLSGIM-----DKSIQL--- 323
+ + + L +D L+ L ++ ++ + + LL GI DK+ L
Sbjct: 260 VFLNYFCDE----LMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTN 315
Query: 324 --------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
D +TII+ C A FE + + + + I + +
Sbjct: 316 KMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGS 375
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTA 433
F +++++MT+ G S +I L + + A IF + E ++ A
Sbjct: 376 FNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNA 435
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
LI + +A+ +Y+ M +G +P T+ +++ GL + ++S A
Sbjct: 436 LINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIA 484
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 116/329 (35%), Gaps = 86/329 (26%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN------------------- 98
R G D TY L+ F + + K + +LM+ GI
Sbjct: 247 RRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCP 306
Query: 99 ----------------IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
D V+Y +++ GD A ++EEM K P +V++T +
Sbjct: 307 DKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIF 366
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+K A + +M + GL P+C YT ++++L ++GK E A IF M E G+
Sbjct: 367 IKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGI 426
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
PD + N LI CK EA+ ++ S
Sbjct: 427 SPDVISFNALINGFCKCSRV----------------------SEAMHLYEEMQNRGSY-- 462
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG-IMDKSI 321
P + L++ L ++ ++I ++ G +MDK
Sbjct: 463 --------------------------PDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGF 496
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEY 350
LD A+ T+I N L F++
Sbjct: 497 TLDRAIAQTLIRGNSIENASTSRCLDFKF 525
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 152/406 (37%), Gaps = 28/406 (6%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
Y S + AG +D AV +++EM C + Y ++ +L + R A Y +M
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
RG + +TY+ + L + + E+ M+ PD A NI + G
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 224 TIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ--VHPQFSPEFISDNDA 278
+ + + +N + Y + + K D W+ +H FSP DN A
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQ-FWRDMIHKGFSP----DNKA 186
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+ + +D LI ID + SG ++L + V + +I C
Sbjct: 187 CGAIVVGLCDGRKVDLAYELI---------IDVMKSG----RVKLSTLVYNALISGFCRA 233
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R D A + + + Y + ++++ M ++G VY
Sbjct: 234 GRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSY 293
Query: 399 ALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
L+ + P A + + + P+ +Y +I + G A K+++ M +
Sbjct: 294 NQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQ 353
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
KGI P + TF + + LG+ S I +K + LS D +
Sbjct: 354 KGIPPDVVTFTIFIKAF--LGKGS-FNIAKKLLDQMTEMGLSPDCI 396
>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
Length = 564
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 120/249 (48%), Gaps = 5/249 (2%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L H +A FN + + RG+N D TYTT +D + I + ++ M +KG+
Sbjct: 265 LFAHKMGSEALRVFNEI-KLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEP 323
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ Y S++ + AGD + A +++EM K + VS + + RV EA ++
Sbjct: 324 NEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMF 383
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+EM+++G+ + TY +L++ L +AG+ EA++++ ++ +G++P + LI+ C+
Sbjct: 384 EEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEE 443
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLW---QVHPQFSPEFISD 275
G+ + +L+ M L + + F K D + W + P +
Sbjct: 444 GQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGMAWLAGMLKKNLKPREHTF 503
Query: 276 NDAVEFVTT 284
N VE +++
Sbjct: 504 NSLVELLSS 512
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 42 THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDA 101
TH +++A F + + +G HD TY ++ +A R+S V+E + G+
Sbjct: 372 THGRVDEALGMFEEMVK-KGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSV 430
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
T+T ++ + G VD AV + + M K P + + R ++
Sbjct: 431 STFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGMAWLAG 490
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
M+++ L P +T+ L+E L +G+ ++AL + + M + G + AC +L+E+ C
Sbjct: 491 MLKKNLKPREHTFNSLVELLSSSGRVDDALLVLNTMFKIGHELGSLACTMLVEQLC 546
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 133/297 (44%), Gaps = 21/297 (7%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P V Y + LF + EA V+ E+ RG + TYT ++ L + G +EA +I
Sbjct: 253 PDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQI 312
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGE---TRTII--LILRYMKENRLALRYPV----- 243
+++M + G++P++ A L+ CKAG+ R + ++ + +KE+ ++ V
Sbjct: 313 WNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCT 372
Query: 244 ---FKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAV----EFVTTDIEGPLSI 292
EAL F K E+D + + + Q + ++A+ + +++ +E +S
Sbjct: 373 HGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVST 432
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L+ + ++ + A LL + K ++ + + +II C RR + + +
Sbjct: 433 FTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGMAWLAGML 492
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
K +L + +L+ +L ++ M K GH LG +L+ +L + +
Sbjct: 493 KKNLKPREHTFNSLVELLSSSGRVDDALLVLNTMFKIGHELGSLACTMLVEQLCTGK 549
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D+ + II H+ AL F N++ Y I L K+ + +I
Sbjct: 254 DTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIW 313
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSA 441
EM G Y L+ A A K++ L ++ T + L+ + +
Sbjct: 314 NEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTH 373
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
G D+AL +++ M +KGI + T+N+L+ GL K GR+S+A ++Y +
Sbjct: 374 GRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQ 420
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 119/333 (35%), Gaps = 18/333 (5%)
Query: 154 EATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNI 211
+A D + + R G+ P+ M +RA + + +FS + P D A
Sbjct: 131 DAADAAEVLASRLGIHPSLRALNFAMRSALRAARPDLVFRLFSAFSSSPDFPGDAATVAF 190
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L+ C G + +LR + + + + F A + +H +
Sbjct: 191 LVRACSAEGRPLDGLRLLRDGARRGVPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAG 250
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ D I Q ++ L K + + I + +D+ +T
Sbjct: 251 SVPDT--------------VIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTA 296
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ C D A + V + AY +L+ K F ++ +EM G
Sbjct: 297 IDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGL 356
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
+L+ + R A +F + + + TY LI AG +A++
Sbjct: 357 KESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQ 416
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+Y+ + G+ PS+ TF L+ + + G+V A
Sbjct: 417 VYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAA 449
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 175/430 (40%), Gaps = 32/430 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G FTY+ + ++ RI ++ + M G + D + L +
Sbjct: 218 SKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLH 277
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + E+M+ K P +V+YT + L N R EA +++EM++ GL P+ L+
Sbjct: 278 DALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALI 337
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
L + K EEA E+ S+M ++ + N LI +AG I+ +M+ N
Sbjct: 338 FGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCE 397
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y + T + ++ ++L+ ++ +P+ S N
Sbjct: 398 PGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQ----------------- 440
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ L K L + +S M+ D + +I+ C ++ AL F+
Sbjct: 441 -LLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYK 499
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + Y LI L + + E+ E+M KA V L +++H L A
Sbjct: 500 GMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRA 559
Query: 415 AKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
KIF +LP+ TY LI A +AL ++K M KG+ P TF
Sbjct: 560 QKIFLHMIQKEILPD----IVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKY 615
Query: 469 LLAGLEKLGR 478
L+ GL GR
Sbjct: 616 LINGLLDEGR 625
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 199/488 (40%), Gaps = 33/488 (6%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
L+ L I+ D + VN V++ E A F+ W GF+H +F ++ + +
Sbjct: 78 LERLDIELDPFVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYIVSLLFVDGNFA 137
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ ++ +G+ + Y ++ AG D + ++EM + C + Y Y+
Sbjct: 138 LLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYI 197
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+L N Y + +GL +TY+ + L ++ + E E+ + M G
Sbjct: 198 GVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFS 257
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSL 260
PD ACNI I+ CK + ++ M+ + Y L K E
Sbjct: 258 PDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVG- 316
Query: 261 LWQ--VHPQFSPEFIS---------DNDAVE--------FVTTDIEGPLSIDQGLVLILL 301
LW+ V P+ ++ N VE ++ +IE +SI L+
Sbjct: 317 LWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFW 376
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV-KMD---LN 357
+ ++ +++S + ++ + V++ I +N H G + E + KM+ +N
Sbjct: 377 RAGSIDKAYTIISFM--RTNGCEPGVVTYNILLN--HYCTIGMMEKAENLITKMETSGVN 432
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+R +Y L+ L K + K V + + G + +LI ++ A ++
Sbjct: 433 PDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALEL 492
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + Q TY LI FS G + A ++++ M + I P++ +N++L L K
Sbjct: 493 FKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCK 552
Query: 476 LGRVSDAE 483
+G + A+
Sbjct: 553 VGDLKRAQ 560
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 113/229 (49%), Gaps = 6/229 (2%)
Query: 32 DSYTVNQVLK----THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
D Y+ NQ+LK TH ++KA+ F + GF D + ++D F + K++ S
Sbjct: 434 DRYSYNQLLKGLCKTHQ-LDKAFAFVSDHMEVGGF-CDIVSCNILIDAFCKVKKVKSALE 491
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F+ M KG+ DAVTY ++++ L + G + A ++E+M + P + Y + L
Sbjct: 492 LFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLC 551
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+K A ++ MIQ+ + P+ TY L+ +L + + EAL++F M+ GV+PD
Sbjct: 552 KVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSL 611
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
LI G + + YM EN + L V + + K+ ++
Sbjct: 612 TFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLISVLKLKNK 660
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA+ +++ R+ G TY +L+ + + + + M+ G+N D +Y
Sbjct: 381 IDKAYTIISFM-RTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYN 439
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L +D A + + IVS + +VK A +++KEM +
Sbjct: 440 QLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYK 499
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ + TY L+ L G Y A E+F +M +A + P+ NI++ CK G+ +
Sbjct: 500 GMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRA 559
Query: 226 ILILRYM 232
I +M
Sbjct: 560 QKIFLHM 566
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 145/403 (35%), Gaps = 95/403 (23%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF+ D + +D + R+ + E M+ KG D VTYT+V+ L N A
Sbjct: 255 GFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEA 314
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ---------------- 164
V +WEEM P +V+ A + L N +V+EA ++ M+
Sbjct: 315 VGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISG 374
Query: 165 -------------------RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
G P TY +L+ + G E+A + +KM+ +GV PD
Sbjct: 375 FWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPD 434
Query: 206 K-----------------------------------AACNILIEKCCKAGETRTIILILR 230
+ +CNILI+ CK + ++ + + +
Sbjct: 435 RYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFK 494
Query: 231 YMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDI 286
M + A+ Y L + + + L Q + Q P N + +
Sbjct: 495 EMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCK-- 552
Query: 287 EGPLSIDQGLVLILLKK-----------------KNLVAIDSL--LSGIMDKSIQLDSAV 327
G L Q + L +++K KN A+++L + K ++ DS
Sbjct: 553 VGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLT 612
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+I D R A +EY ++ + L+R LI +L
Sbjct: 613 FKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLISVL 655
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 136/362 (37%), Gaps = 57/362 (15%)
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ +LF++ ++ + +G+ + Y +L+ VRAGK++ + F +M +G
Sbjct: 127 VSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGC 186
Query: 203 QPDKAACN----ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
+ N +LI+ CC L+ +Y +AL + L F +
Sbjct: 187 REFGIDYNRYIGVLIKNCC-------FDLVEKYYG---MALSKGL---CLTPFTYSRWIS 233
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+L + E ++D D F + ID L K+ L ++ +
Sbjct: 234 ALCQSNRIELVEELLADMDRFGFSPDIWACNIYID-----CLCKQNRLHDALQMVEKMRG 288
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
K D +T++ C+++R A+ +E VKM L + A ALI L K + +
Sbjct: 289 KGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEE 348
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVY 438
E+ M L V + Y ALI +
Sbjct: 349 AFELASRMLSLNIELSV---------------------------------SIYNALISGF 375
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADA 496
+ AGS DKA I M G P + T+N+LL +G + AE I + E + D
Sbjct: 376 WRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDR 435
Query: 497 LS 498
S
Sbjct: 436 YS 437
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 194/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K + R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L ++ S+L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAGKMIEARSILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I C+ D A + +++ + E Y LI K + +
Sbjct: 287 APTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ AAK +L+ + Q
Sbjct: 347 KLLDKLIEKDI---ILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAK 458
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 160/379 (42%), Gaps = 31/379 (8%)
Query: 30 KWDSYTVNQVLKTHPPMEKAWL----------FFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
K + V + +K++ + KA L +FN + S G R T+ M+ F +
Sbjct: 105 KMEELGVERTIKSYNALFKAILRRGRYMMAKRYFNKM-LSEGIEPARHTFNVMIWGFFLS 163
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
++ + FE M+ + I+ D VTY ++++ ++ A + EMK + PT+V+Y
Sbjct: 164 GKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTY 223
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
T +K D+V +A + +EM G+ PN TY+ L+ L AGK EA I +M +
Sbjct: 224 TTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMD 283
Query: 200 AGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA------LQTFK 252
+ P D + LI C +G +L+ M +R V EA ++ F
Sbjct: 284 KYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAM------IRLSVPTEAGHYGVLIENFC 337
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
A + D + + + I + + P+ + L ++L
Sbjct: 338 KAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPM------IEYLCNNGQAAKAEAL 391
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+ ++ +Q D ++T+I + D A + ++ ++ E++AY +L+ +K
Sbjct: 392 VRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLK 450
Query: 373 LNTFPKVAEIVEEMTKAGH 391
N ++ M + H
Sbjct: 451 KNEPADAKAALDSMIENDH 469
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 186/486 (38%), Gaps = 78/486 (16%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
AW + V RS G + +T M++ + ++I + K M+EKG+ D VTY +++
Sbjct: 238 AWEIYQEVVRS-GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 296
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ G ++ A + + M K P + +Y A + L + A V EM++ G+
Sbjct: 297 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 356
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ TY +L+ R +A IF +M GV PD + + LI K G +
Sbjct: 357 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 416
Query: 229 LRYMKENRLA-------------LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
R MK LA R V EAL KV D E +
Sbjct: 417 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL---KVRD---------------EMLEQ 458
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
++ VT + +I GL K+K L D L + + ++ + D +T+I
Sbjct: 459 GCVLDVVTYN-----TILNGLC----KEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 509
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE-------------- 381
+ A+ FE ++ +L + Y LI K + KV E
Sbjct: 510 SKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 569
Query: 382 ---------------------IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS- 419
+ +EM + G + ++ A V A + S
Sbjct: 570 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 629
Query: 420 -LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
LL TY LI + + D+A + M G+ P + T+NV+L G + GR
Sbjct: 630 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 689
Query: 479 VSDAEI 484
+ +AE+
Sbjct: 690 MQEAEL 695
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 151/356 (42%), Gaps = 27/356 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G D +++ ++ + + + F M+ G+ D V YT ++ G +
Sbjct: 387 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 446
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +EM + C +V+Y + L + EA +++ EM +RG+ P+ YT+T L+
Sbjct: 447 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
+ G +A+ +F M + ++PD N LI+ CK E + + M R+
Sbjct: 507 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 566
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ Y + E LW V F I+ N V+ + D
Sbjct: 567 PNHISYGILINGYCNMGCVSE-AFRLWDEMVEKGFEATIITCNTIVKGYCR-AGNAVKAD 624
Query: 294 QGLVLILLKK--KNLVAIDSLLSGI-----MDKSIQL-----DSAVISTIIEVNC----- 336
+ L +LLK + + ++L++G MD++ L +S ++ +I N
Sbjct: 625 EFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGF 684
Query: 337 --DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
R ++ L+ + ++ +N +R+ Y +LI + N + + +EM + G
Sbjct: 685 SRQGRMQEAELIMLKM-IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 739
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 163/400 (40%), Gaps = 51/400 (12%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+A+++ F +++ KG+ + S++ L G VD A I++E+ +
Sbjct: 196 QARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVY 255
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+ + L N +++ +M ++G+ P+ TY L+ R G EEA E+ M
Sbjct: 256 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 315
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
G++P N +I CK G +Y++ V E L K+
Sbjct: 316 SGKGLKPCVFTYNAIINGLCKTG---------KYLRAK------GVLDEML---KIGMSP 357
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
D+ + + E +++ ++ E P QG+V +LV+ +L+ G++
Sbjct: 358 DTATYNI---LLVECCRNDNMMDAERIFDEMP---SQGVV------PDLVSFSALI-GLL 404
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
K+ LD AL F L + Y LIG +
Sbjct: 405 SKNGCLDQ------------------ALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 446
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA--TYTALI 435
+ ++ +EM + G L V +++ L + A ++F+ + E T+T LI
Sbjct: 447 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
Y G+ +KA+ +++ M ++ + P + T+N L+ G K
Sbjct: 507 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 546
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF T T++ + A M KGI D +TY ++++ ++D
Sbjct: 598 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 657
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M+ P +++Y + R++EA + +MI+RG+ P+ TYT L+
Sbjct: 658 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 717
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPD 205
V +EA + +M + G PD
Sbjct: 718 GHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 143/377 (37%), Gaps = 76/377 (20%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLP------------PNCYTYTVLMEYL 181
++ S++A + IL + R+ +A V M+++ G+ NC + ++ + L
Sbjct: 131 SLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLL 190
Query: 182 VR----AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
VR A K E E F ++ G+ ACN L+ K G
Sbjct: 191 VRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWV--------------- 235
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
L W+++ E + V T +I ++
Sbjct: 236 ---------------------DLAWEIYQ----EVVRSGVQVNVYTLNI---------MI 261
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL-AFEYSVKMD- 355
L K + + S LS + +K + D +T+I C R G L AFE M
Sbjct: 262 NALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC----RQGLLEEAFELMDSMSG 317
Query: 356 --LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
L Y A+I L K + + +++EM K G S +L+ +
Sbjct: 318 KGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMD 377
Query: 414 AAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
A +IF +P +++ALIG+ G D+ALK ++ M G+ P + +L+
Sbjct: 378 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIG 437
Query: 472 GLEKLGRVSDAEIYRKE 488
G + G +S+A R E
Sbjct: 438 GFCRNGVMSEALKVRDE 454
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 193/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E Y LI K+ + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ A K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 458
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 166/418 (39%), Gaps = 16/418 (3%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+D + + + + +F M+E G++ D VTY S++ G ++ +++ E
Sbjct: 231 FTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNE 290
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P I++Y + +++ A + + EM GL PN TY+ L++ + G
Sbjct: 291 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 350
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ A+++ M+ G+ P++ LI+ CKAG +L M + + L +
Sbjct: 351 MQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 410
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
L A +V + IS N V LV +K + +
Sbjct: 411 LLDGLCKAGRMIE-AEEVFRSMLKDGISPNQQVY-------------TALVHGYIKAERM 456
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+L + + +I+ D + +II +C R+ + L E ++ +
Sbjct: 457 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 516
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPED 424
I K +EM G + +LI L A A F L
Sbjct: 517 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGL 576
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Q A YT+LI + A K++ M +G+ P + F L+ G K G + +A
Sbjct: 577 QPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 634
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/460 (20%), Positives = 180/460 (39%), Gaps = 36/460 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + D TY +++D +G+ + + +F M++ G D +TY +++ +
Sbjct: 257 REMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKM 316
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + EMK P +V+Y+ + ++ A + +M + GL PN +TYT L
Sbjct: 317 PRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSL 376
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +AG EA ++ + M +AGV+ + L++ CKAG + R M ++ +
Sbjct: 377 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 436
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV--EFVTTDIEGPLSIDQG 295
+ V+ VH E + D + + +I+ L +
Sbjct: 437 SPNQQVYTAL----------------VHGYIKAERMEDAMKILKQMTECNIKPDLILYGS 480
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
++ ++ L +L + + I + + +TII+ + AL F+ +
Sbjct: 481 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y LI L + + M G V + LI L A
Sbjct: 541 VEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAK 600
Query: 416 KIFSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
K+F ++ +C +TALI G+ +AL + M I L + L
Sbjct: 601 KLF----DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 656
Query: 470 LAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKIC 509
++G + G + A + E + K +P EE +C
Sbjct: 657 VSGFSQCGELHQARKFFNE-------MIEKGILP-EEVLC 688
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 200/499 (40%), Gaps = 64/499 (12%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGI- 97
L+ P + A FF W GF H +Y ++ + A+ + + V E++ +
Sbjct: 80 LREDPKL--ALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMD 137
Query: 98 ------NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL----KECYPTIVSYTAYMKIL- 146
NI + +++ +S +G D +++ E+ L EC+ + ++ K
Sbjct: 138 MGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARS 197
Query: 147 --FLNDRVKEATD------VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
FL R+ ++ + + +MI G+ P+ +TY V+++YL + G E + +F +M+
Sbjct: 198 CNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR 257
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE----------NRLALRYPVFKEAL 248
E G+ PD N LI+ K G + + MK+ N L Y F++
Sbjct: 258 EMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMP 317
Query: 249 QTFKVADEN----------------DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ F+ E D+ + Q + + + D + + I
Sbjct: 318 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLI 377
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
D K NL LL+ ++ ++L+ + +++ C R A F +
Sbjct: 378 DAN-----CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
K ++ + Y AL+ IK +I+++MT+ + L +I S R+
Sbjct: 433 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLE 492
Query: 413 PAAKIFSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
L+ E+ K T +I YF AG + AL ++ M G+ ++ T+
Sbjct: 493 ET----KLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 548
Query: 467 NVLLAGLEKLGRVSDAEIY 485
VL+ GL + G V A Y
Sbjct: 549 CVLIDGLCEAGIVELAVDY 567
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 35/199 (17%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRG + + TT++D + +A + S F+ MQ+ G+ VTY ++ L AG V
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIV 561
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ AV+ + M P + YT+ + L N+ ++ A ++ EM RG+ P+ +T L
Sbjct: 562 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTAL 621
Query: 178 MEYLVRAGKYEEAL-----------------------------------EIFSKMQEAGV 202
++ ++ G +EAL + F++M E G+
Sbjct: 622 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 681
Query: 203 QPDKAACNILIEKCCKAGE 221
P++ C L+ + K G+
Sbjct: 682 LPEEVLCICLLREYYKRGQ 700
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + YT+++D I S K +F+ MQ +G+ D +T+++ G++
Sbjct: 573 SLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQ 632
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVL 177
A+ + M + YT+ + + +A + EMI++G LP +L
Sbjct: 633 EALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLL 692
Query: 178 MEYLVRAGKYEEALEIFSKMQ 198
EY R G+ +EA+E+ ++M+
Sbjct: 693 REYYKR-GQLDEAIELKNEME 712
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 174/443 (39%), Gaps = 55/443 (12%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E L + +SR D TY+T+L + +A ++ + + + + +G+ DA+ YT
Sbjct: 63 EAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTK 122
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
VM L + + A+ + EEM C PT++++ + ++ A + + M G
Sbjct: 123 VMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASG 182
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ + TY LM+ L +AG+ +EA ++ +M+ +G PD A + + CK+G+
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAH 242
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
+L M+++ + L + + D+ L + E ++ +D
Sbjct: 243 QVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMM------EQMASSDGCGL----- 291
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
N+V +++ G+ C R A
Sbjct: 292 ------------------NVVGYSTVVDGL-------------------CKLGRTQEARS 314
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
E + + Y +L+ L K + E V EM G L+H L
Sbjct: 315 VMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLC 374
Query: 407 SARRPVPAAKIFSLL----PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
S R A ++ + C +TY ALIG AG D ALK ++ M +G
Sbjct: 375 SCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGC 434
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA 482
P +++ ++ GL + GR A
Sbjct: 435 DPDGVSYSTIVEGLARSGRALQA 457
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 185/449 (41%), Gaps = 32/449 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + T+ +++ F + R + + E M +GI + V+Y ++ L A
Sbjct: 5 GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64
Query: 121 VNIWEEM--KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ +M + P +V+Y+ + +V+E+ ++ KE+I RGL P+ YT +M
Sbjct: 65 EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
L ++ + EALE+ +M AG P N LI CC+ +L+ M + +
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y + L E + LL ++ +P+ ++ +
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS----------------- 227
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
V L K ++ +L + D + +TI++ C + D AL E
Sbjct: 228 -FVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286
Query: 355 D-LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
D L Y ++ L KL + ++E M +AG V + L++ L A +
Sbjct: 287 DGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEE 346
Query: 414 AAK-IFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKG-----IHPSLGTF 466
A + + + E K A TY +L+ S G +A ++ + M G PS+ T+
Sbjct: 347 AVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTY 406
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
N L+ GL K GR+ DA + + +S D
Sbjct: 407 NALIGGLCKAGRIDDALKFFQRMRSQGCD 435
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 123/523 (23%), Positives = 217/523 (41%), Gaps = 62/523 (11%)
Query: 8 VYKILKYSTWDS-AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNH 64
+ K+ Y+T S +++ +L IK D++ +N V+ + ++ F+ + G
Sbjct: 85 IVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEP 144
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
T+T +++ + + + +++ G D TY +++ L G AV
Sbjct: 145 SVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWL 204
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M+ + P +V Y+ M L + V EA + EM +G+ PN TYT L++ L
Sbjct: 205 RKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNF 264
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKE------- 234
G+++EA + +M + GV PD + NIL++ CK G + +++I + + E
Sbjct: 265 GRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTY 324
Query: 235 NRLALRYPV---FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
N L RY + EA + F++ L P+ ++ T+ I G
Sbjct: 325 NSLIDRYCLQNQMDEATRVFELMVSRGCL---------PDIVA-------YTSLIHGWCK 368
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
I KN+ LL ++ D +T+I C R L A E
Sbjct: 369 I-----------KNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR---PLAAKELF 414
Query: 352 VKMDL-----NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
+ M NL+ A ++ L K + + M K+ L + + ++++ +
Sbjct: 415 LNMHKYGQVPNLQTCAI--ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMC 472
Query: 407 SARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
SA + A ++FS LP Q YT +I + G DKA + M G P
Sbjct: 473 SAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSC 532
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKEK--KSIQADALSKDAVPME 505
T+NV + GL V++ EI R K ++ S DA E
Sbjct: 533 TYNVFVQGL-----VAEREIARSIKYLTMMRDKGFSVDATTTE 570
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/461 (18%), Positives = 163/461 (35%), Gaps = 94/461 (20%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE--------------- 161
+D A+N + M P+++ +T + + A + KE
Sbjct: 56 IDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILN 115
Query: 162 ---------------------MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
M++ GL P+ T+T+L+ L G A+E+ +++
Sbjct: 116 VVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKT 175
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKE---NRLALRYPVFKEALQTFKVADEN 257
G + D +LI CK G+T + LR M+E N + Y + L + E
Sbjct: 176 GYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEA 235
Query: 258 DSLLWQVHPQ-FSPEFISDNDAV-----------------EFVTTDIEGPLSIDQGLVLI 299
L ++ + P ++ + E + + L LV +
Sbjct: 236 LGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDV 295
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K+ ++ S++ ++ D +++I+ C + D A FE V +
Sbjct: 296 LCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPD 355
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
AY +LI K+ K +++EM K G + V LI RP+ A ++F
Sbjct: 356 IVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFL 415
Query: 419 -----SLLPEDQKCT-------------------------------ATYTALIGVYFSAG 442
+P Q C Y+ ++ SAG
Sbjct: 416 NMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAG 475
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ AL+++ + KG+ ++ + +++ G K G + AE
Sbjct: 476 KLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAE 516
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
P+ LF N G + T +LD +++ +S +F M++ ++++ V Y
Sbjct: 407 PLAAKELFLNM--HKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIY 464
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+ ++ + +AG ++ A+ ++ + K + +YT + + +A D+ M +
Sbjct: 465 SIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEE 524
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
G P+ TY V ++ LV + +++ + M++ G D ++I
Sbjct: 525 NGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIIN 574
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +++ L MEK+ L N V Y+ +LD A ++++ +F +
Sbjct: 439 SQLLSEALSLFHAMEKSNLDLNIV-----------IYSIILDGMCSAGKLNTALELFSCL 487
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
KG+ I+ YT +++ + G +D A ++ M+ C P +Y +++ L +
Sbjct: 488 PAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREI 547
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ M +G + T +++ YL
Sbjct: 548 ARSIKYLTMMRDKGFSVDATTTEMIINYL 576
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 9/221 (4%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL K+ +K ++ N +K H +E A+ + +S + TY+T++D E
Sbjct: 179 DLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCE 238
Query: 79 AKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ R+ +FE M K I DA+TY +++ S G VD A I E MK C P +
Sbjct: 239 SGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVF 298
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+Y+A M R++EA D ++EM GL + YT+L+ Y R G+ +EA+ + +M
Sbjct: 299 NYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEM 358
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+E + D N+L+ C G T + +L NRL+
Sbjct: 359 KETKCKADIVTVNVLLRGFCGEGRTEEALGML-----NRLS 394
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S G + + F Y+ ++ F + R+ FE M+ G+ D V YT ++++ G +
Sbjct: 289 KSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRI 348
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ + EEMK +C IV+ ++ R +EA + + G+ N +Y ++
Sbjct: 349 DEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIV 408
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ L + G ++ALE+ G P A N L+ CKAG
Sbjct: 409 LNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAG 451
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/461 (19%), Positives = 176/461 (38%), Gaps = 70/461 (15%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
VN + P + A FN V +GFNH+ TY+T++D AK+ ++ + M
Sbjct: 53 AVNLIKHERDP-QHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMY 111
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK--LKECYPTIVSYTAYMKILFLNDRV 152
+ + ++M + + + + + V ++ +++ ++E P++ + + + +L + +V
Sbjct: 112 ETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVRE-KPSLKAISTCLNLLVESKQV 170
Query: 153 KEAT----DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ-PDKA 207
D+ K+ + L PN + + ++Y ++G E A + +M+++ + P+
Sbjct: 171 DLLRGFLLDLNKDHM---LKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLI 227
Query: 208 ACNILIEKCCKAGETRTIILILRYM--KENRL--ALRYPVFKEALQTFKVADENDSLLWQ 263
+ L++ C++G + I + M K+ L AL Y V + D ++
Sbjct: 228 TYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIM-- 285
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
EF+ N N+ +L+SG
Sbjct: 286 -------EFMKSNGC------------------------SPNVFNYSALMSGF------- 307
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
C R + A+ AFE L + Y LI + + ++
Sbjct: 308 ------------CKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALL 355
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSA 441
EEM + + +L+ R A + + L + A+Y ++
Sbjct: 356 EEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQK 415
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G DKAL++ +G P T N LL GL K G DA
Sbjct: 416 GDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDA 456
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 192/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + ++ + E Y LI K + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ AAK +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 458
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 8/334 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G +L+ M +
Sbjct: 263 PGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSV 322
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ ++ F + D + + + I + + P ++
Sbjct: 323 PTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP------MI 376
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L ++L+ ++ +Q D ++T+I + D A + ++ ++
Sbjct: 377 EYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVD 435
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
E++AY +L+ +K N ++ M + H
Sbjct: 436 SEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDH 469
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 214/518 (41%), Gaps = 46/518 (8%)
Query: 6 SNVYKILKYSTWDSAQDLL---KNLPIKWDSYTVNQVLKTHPPMEK---AWLFFNWVSRS 59
S ++ + K D A +LL ++ I N V+K + A +F V+ +
Sbjct: 35 SLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGT 94
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI-DAVTYTSVMHWLSNAGDVD 118
+ D T+ ++D ++ R+ +FE M + + VTYT+V++ L G +D
Sbjct: 95 K-CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLD 153
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + + M C P +++Y+ ++ L R + + +EM +RG P+ Y L+
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
L ++ + +EALE+ M +G P N L+E C++ + +++ M E
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP 273
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTD--------I 286
+ Y L D+ +LL Q V + P+ I+ + ++ + D +
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333
Query: 287 EGPLSI-----------DQGLVLILLK-----KKNLVAIDSLLSGIMDKSIQLDSAVIST 330
E I + G ++++ +K+ A+ +LL ++D + D + S
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQAL-ALLRRMIDSEVVPDLSSFSM 392
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA- 389
+I C D A F + + AY ALI L K K + E M ++
Sbjct: 393 VIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF 452
Query: 390 ----GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
V G + R+ A R V P+ A+Y ALI +
Sbjct: 453 RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG----ASYGALIRGLCRVSCVE 508
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+A ++++ + KG +G +NVL+ L K R+SDA
Sbjct: 509 EAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 190/454 (41%), Gaps = 43/454 (9%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ FTY +++ +A ++ + + M+++GI + V+ L AG A+ +
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM-IQRGLPPNCYTYTVLMEYLVR 183
+ + +C P I+++ + L + RV+EA +++ M PN TYT ++ L +
Sbjct: 89 KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALR 240
GK + A+E+ M E G P+ ++L+E CKAG T +L+ M +
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208
Query: 241 YPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y L + DE L+ + P ++ N +E + +D+ LI
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ----VDRAFRLI 264
Query: 300 LLKKK-----NLVAIDSLLSGIMDKSIQLDSA-----------------VISTIIEVNCD 337
+ + +++ +++++G+ + +LD A STII+ C
Sbjct: 265 QVMSERGCPPDVINYNTVIAGLC-RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323
Query: 338 HRRRD------GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
R D A E + Y +I L + + ++ M +
Sbjct: 324 DWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV 383
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKAL 448
+ +++I L + A KIF ++ E ++C Y ALI G DKA+
Sbjct: 384 VPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE-RECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++++ M + P + T+N +L GL +GR+ +A
Sbjct: 443 RVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEA 475
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 131/323 (40%), Gaps = 52/323 (16%)
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
PN +TY L+ L +AGK ++A E+ +M++ G+ P A N +I+ CKAG
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGR------- 80
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
F +AL FK + +P+ I+ N
Sbjct: 81 ---------------FGDALGYFKTV---------AGTKCTPDIITFNI----------- 105
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI-STIIEVNCDHRRRDGALLA 347
LV L+K + + + S L + V +T+I C + D A+
Sbjct: 106 -------LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIEL 158
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+ + Y L+ L K K +++EMT+ G V + L++ L
Sbjct: 159 LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCK 218
Query: 408 ARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+RR A ++ L+ TY +L+ ++ + D+A ++ + M +G P +
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278
Query: 466 FNVLLAGLEKLGRVSDAEIYRKE 488
+N ++AGL + R+ DA+ K+
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQ 301
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S + + K+H ++ A+ F +S R + Y ++D + + VFELM
Sbjct: 391 SMVIGSLCKSHD-LDAAYKIFGMMS-ERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
E TY SV+ L G ++ AV + E M KEC+P SY A ++ L V
Sbjct: 449 VES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+EA ++++ + +G Y VL+ L + + +A + +K+ EAG
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 191/483 (39%), Gaps = 55/483 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
E W + R GF+ +T ++ + + I FE+M++ D TY
Sbjct: 107 FELYWQVLKEIKRC-GFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYN 165
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+V+H + V A+ I+ M C P I +++ + + + + + A ++ EM QR
Sbjct: 166 TVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQR 225
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ PN TYT+++ L +A K + A +F M++ G PD N L+ CK G
Sbjct: 226 RILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEA 285
Query: 226 ILILRYMKENRLALR---YPVFKEALQTFKVADENDSLLW---QVHPQFSPEFISDNDAV 279
+ +L+Y +++R L Y + L F+ D+ +W P+ I
Sbjct: 286 LGLLKYFEKDRYVLDKQGYSCLIDGL--FRARRFEDAQVWYRKMTEHNIKPDVI------ 337
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
T ++G L K LL+ + ++ + D+ + +I+ CD
Sbjct: 338 -LYTIMMKG-----------LSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLG 385
Query: 340 RRDGA-LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-------- 390
D A L E S K D Y LI + + +I EM K G
Sbjct: 386 LLDEAKSLHLEIS-KNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTF 444
Query: 391 --------HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYF 439
+ + LL +++ R P +F L + TA+ ++
Sbjct: 445 NALIDGFCKAGNIEKAQLLFYKMEIGRNP----SLFLRLSQGANRVLDTASLQTMVEQLC 500
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSK 499
+G KA I + G P++ T+N+L+ G K G ++ A K K +Q LS
Sbjct: 501 DSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGA---FKLFKELQLKGLSP 557
Query: 500 DAV 502
D+V
Sbjct: 558 DSV 560
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 59 SRGFNH--DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
S+G N D + TM++ ++ I + + + G + +TY ++H AG+
Sbjct: 480 SQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGN 539
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++GA +++E++LK P V+Y + L +R ++A V ++++ G P Y
Sbjct: 540 INGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKS 599
Query: 177 LMEYLVRAGKYEEALEIFSK 196
M + R K A ++ K
Sbjct: 600 FMTWSCRRNKITLAFSLWLK 619
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 34/194 (17%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + TY ++ F +A I+ +F+ +Q KG++ D+VTY ++++ L +A + A
Sbjct: 519 GFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDA 578
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ---------------- 164
+ +++ C P Y ++M +++ A ++ + ++
Sbjct: 579 FTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEEN 638
Query: 165 ----------RGLPPNCYT--------YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
RGL + YT+ + L +AG+ EEAL+IF ++E V
Sbjct: 639 FEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTP 698
Query: 207 AACNILIEKCCKAG 220
+C LI + K G
Sbjct: 699 PSCVKLIYRLLKVG 712
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQ-----------EKGIN--IDAVTYTSVMHWLSNA 114
T+ ++D F +A I + +F M+ +G N +D + +++ L ++
Sbjct: 443 TFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDS 502
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G + A NI ++ P I++Y + + A ++KE+ +GL P+ TY
Sbjct: 503 GLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTY 562
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYMK 233
L+ L+ A + E+A + ++ + G P + C+ + T L L+Y++
Sbjct: 563 GTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLR 622
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y T+ G K+IS + ++E M++ G D TY ++ AG VD
Sbjct: 432 KGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDI 491
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +EE++ +C P ++SY + + L N V EA +KEM ++GL P+ TY+ L+E
Sbjct: 492 AVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIE 551
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ K E A +F +M P+ NIL++ ++G T + + +K+ L
Sbjct: 552 CFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 611
Query: 238 -ALRYPVFKEALQT-----FKVADENDSLLWQVHP 266
++ Y V E LQ+ + +N W V P
Sbjct: 612 DSITYAVL-ERLQSGGHGKLRFRRQNPITGWVVSP 645
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 171/422 (40%), Gaps = 63/422 (14%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+TY +L + A S+ V+ M G +D Y ++ L+ V + ++E+
Sbjct: 198 YTYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYNMLLDALAKDEKV-CSYKVFED 256
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK + C P + +YT +++ + + EA +++ M+ +G PN Y ++E L +
Sbjct: 257 MKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRM 316
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++A+ +FSKM E +QP++ ++++ G+ + I+ K+ Y F
Sbjct: 317 VDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGKLNKLDNIVDISKKYINKQIYAYFVR 376
Query: 247 ALQTFKVADENDSL---LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
L A E L +W H + D DA +S+ + L
Sbjct: 377 TLSKVGHASEAHRLFCNMWNFHDK------GDKDAC----------MSMLESLC---SAG 417
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
K AID LL+ I +K I D+ + +T+
Sbjct: 418 KMTEAID-LLNKIHEKGITTDTIMYNTVFTA----------------------------- 447
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
L +L + ++ E+M + G ++ +LI G A R A K F L E
Sbjct: 448 ------LGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEEL-E 500
Query: 424 DQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+ C +Y +LI G D+A +K M KG++P + T++ L+ K +V
Sbjct: 501 NSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVE 560
Query: 481 DA 482
A
Sbjct: 561 MA 562
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 43/274 (15%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPI--KWD----SYTVNQVLKTH-PPMEKAWLFF 53
+R +IS V ++ + + + +DL + + + KWD +YT +L+ + ++ + F
Sbjct: 161 VRGSISTVNILVGF--FGAGEDLERCVSLVKKWDLRLNAYTYKCLLQAYLRALDSSTAFR 218
Query: 54 NWVSRSR-GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
++ R G+ D F Y +LD + +++ S K VFE M+ + D TYT ++
Sbjct: 219 VYLDMIRHGYRLDIFGYNMLLDALAKDEKVCSYK-VFEDMKRRHCEPDVFTYTIMIRMTG 277
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ D A+ +++ M K C P ++ Y ++ L V +A ++ +M++ + PN +
Sbjct: 278 KSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKMVENDIQPNEF 337
Query: 173 TYTVLMEYLVRAGKYE--------------------------------EALEIFSKMQEA 200
TY+V++ LV GK EA +F M
Sbjct: 338 TYSVILNLLVAEGKLNKLDNIVDISKKYINKQIYAYFVRTLSKVGHASEAHRLFCNMWNF 397
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ DK AC ++E C AG+ I +L + E
Sbjct: 398 HDKGDKDACMSMLESLCSAGKMTEAIDLLNKIHE 431
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 4/183 (2%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFN-WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
+Y V + K E LF N W +G D+ +ML+ A +++ +
Sbjct: 372 AYFVRTLSKVGHASEAHRLFCNMWNFHDKG---DKDACMSMLESLCSAGKMTEAIDLLNK 428
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ EKGI D + Y +V L + +++E+MK P I +Y + R
Sbjct: 429 IHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGR 488
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V A ++E+ P+ +Y L+ L + G +EA F +MQE G+ PD +
Sbjct: 489 VDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYST 548
Query: 212 LIE 214
LIE
Sbjct: 549 LIE 551
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/265 (17%), Positives = 99/265 (37%), Gaps = 67/265 (25%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG--- 115
++G + Y TM++ + + + +F M E I + TY+ +++ L G
Sbjct: 294 AKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGKLN 353
Query: 116 DVDGAVNIWEEMKLKECYP------TIVSYTAYMKILFLN-------------------- 149
+D V+I ++ K+ Y + V + + LF N
Sbjct: 354 KLDNIVDISKKYINKQIYAYFVRTLSKVGHASEAHRLFCNMWNFHDKGDKDACMSMLESL 413
Query: 150 ---DRVKEATDVYKEMIQRGL-----------------------------------PPNC 171
++ EA D+ ++ ++G+ PP+
Sbjct: 414 CSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDI 473
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
+TY +L+ RAG+ + A++ F +++ + +PD + N LI K G+ + +
Sbjct: 474 FTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKE 533
Query: 232 MKENRLALRYPVFKEALQTFKVADE 256
M+E L + ++ F D+
Sbjct: 534 MQEKGLNPDVVTYSTLIECFGKTDK 558
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 44/82 (53%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G N D TY+T+++ FG+ ++ +F+ M + + +TY ++ L +G
Sbjct: 535 QEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRT 594
Query: 118 DGAVNIWEEMKLKECYPTIVSY 139
AV+++ ++K + P ++Y
Sbjct: 595 AEAVDLYAKLKQQGLTPDSITY 616
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
K DL L Y L+ ++ + +M + G+ L ++ +L+ L + V
Sbjct: 190 KWDLRLNAYTYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYNMLLDALAKDEK-V 248
Query: 413 PAAKIFSLLPEDQK---CTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+ K+F ED K C TYT +I + + D+AL +++ M KG P+L +
Sbjct: 249 CSYKVF----EDMKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGY 304
Query: 467 NVLLAGLEKLGRVSDAEI 484
N ++ L K GR+ D +
Sbjct: 305 NTMIEALAK-GRMVDKAV 321
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 182/432 (42%), Gaps = 32/432 (7%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +++ ++ F ++ F + + G + VT+ +++H L V A++++
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M C P +V++T M L RV EA + M++ GL PN TY +++ + +
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 185 GKYEEALEIFSKMQE-AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
G AL + KM+E + ++PD + +I+ K G + M++ +
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + F + + W + E + + + VT GL+ L+K+
Sbjct: 190 YSCMINGFCSSGK-----WSEAQRLLQEMLVRKISPDVVTF---------SGLINALVKE 235
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT-- 361
+L + LL ++ + + +T+++ CD + AL F+ K ++++ T
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHA 295
Query: 362 ---------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
Y LI LI F + E+ EEM G + +I+ L R
Sbjct: 296 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD 355
Query: 413 PAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A ++F + T+ LI Y AG D L+++ M R+GI + T+ L+
Sbjct: 356 EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLI 415
Query: 471 AGLEKLGRVSDA 482
G K+G ++ +
Sbjct: 416 RGFRKVGNINGS 427
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 170/401 (42%), Gaps = 72/401 (17%)
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
+PT+V++ + L + DRV EA D++ +M + PN T+T LM L R G+ EA+
Sbjct: 47 HPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVA 102
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE-----NRLALRYPVFKEA 247
+ +M E G+QP++ +++ CK G+T + + +LR M+E + + +
Sbjct: 103 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGL 162
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAV-----------------EFVTTDIEGPL 290
+ + D + + P+ ++ + + E + I +
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
GL+ L+K+ +L + LL ++ + + +T+++ CD + AL F+
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 351 SVKMDLNLERT-----------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
K ++++ T Y LI LI F + E+ EEM G
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG--------- 333
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
++P+ T TY+++I D+A +++ +M K
Sbjct: 334 --------------------IVPD----TVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA-EIY-RKEKKSIQADALS 498
P++ TFN L+ G K G V D E++ ++ I A+A++
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D TY+ M++ F + + S + + + M + I+ D VT++ +++ L GD+
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-----------RG 166
+ A ++ +EM P +V+ + L + ++K+A +++K M + G
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG 298
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ P+ TY +L+ L+ GK+ EA E++ +M G+ PD + +I CK
Sbjct: 299 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCK 350
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIK----------------WDSYTVNQVLKTHPPMEKAWL 51
+ ++K +SAQDLL+ + DS + L+ M+K+ +
Sbjct: 229 INALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMM 288
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+ G D TY ++ + + ++E M +GI D VTY+S+++ L
Sbjct: 289 DIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGL 348
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+D A +++ M K P IV++ + V + +++ EM +RG+ N
Sbjct: 349 CKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANA 408
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
TY L+ + G +L+IF +M +GV PD
Sbjct: 409 ITYITLIRGFRKVGNINGSLDIFQEMISSGVYPD 442
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 11/185 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV-----------TYTSV 107
S G + T T+LD ++ ++ +F+ MQ+ ++IDA TY +
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L N G A ++EEM + P V+Y++ + L R+ EAT ++ M +
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
PN T+ L+ +AG ++ LE+F +M G+ + LI K G +
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429
Query: 228 ILRYM 232
I + M
Sbjct: 430 IFQEM 434
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 66/139 (47%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M++ + R+ +F+ M K + + VT+ +++ AG VD
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y ++ + + D+++EMI G+ P+ T ++
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLT 451
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + + AL + ++Q
Sbjct: 452 GLWSKEELKRALAMLEELQ 470
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +N + K E +F + S+S F+ + T+ T++ + +A + +F M
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKS--FSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+GI +A+TY +++ G+++G+++I++EM YP ++ + L+ + +
Sbjct: 400 GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459
Query: 153 KEATDVYKEM 162
K A + +E+
Sbjct: 460 KRALAMLEEL 469
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%), Gaps = 20/181 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRI-----------------SSMKYVFEL---MQEKGINID 100
G D ++ T+LD+ ++KR+ +K +E M+++ ID
Sbjct: 166 GCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKCEID 225
Query: 101 AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK 160
VTYT+V+H AG+V A ++ EM + P++ +Y A++++L D V+ A V++
Sbjct: 226 VVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFE 285
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
EM+++G PN TY V++ L G+ E+A+E ++M++ +P+ N++I C A
Sbjct: 286 EMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAE 345
Query: 221 E 221
E
Sbjct: 346 E 346
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 111/291 (38%), Gaps = 60/291 (20%)
Query: 24 LKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
L+ P++W V++VLK H P KA FF + + H ++ +DI G +
Sbjct: 58 LEKYPVEWTPNLVDRVLKLLWNHGP--KALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLR 115
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI----------------- 123
++ + + M+ + + + T+ + +AG D A+ I
Sbjct: 116 DYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFN 175
Query: 124 -----------------------------------WE---EMKLKECYPTIVSYTAYMKI 145
WE +MK ++C +V+YT +
Sbjct: 176 TILDVLCKSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHG 235
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ V++A V+ EMI G+ P+ TY ++ L + E A+ +F +M G P+
Sbjct: 236 FGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPN 295
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
N++I C G + + MK++ ++ ++ F A+E
Sbjct: 296 STTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEE 346
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCTATYTAL 434
E +M K + V ++H G A A ++F+ +LP ATY A
Sbjct: 212 EFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLP----SVATYNAF 267
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I V + + A+ +++ M RKG P+ T+NV++ GL +GR+ A
Sbjct: 268 IQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKA 315
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 105/495 (21%), Positives = 193/495 (38%), Gaps = 30/495 (6%)
Query: 16 TWDSAQDLL---KNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTY 69
+WD +LL ++ + +D +T + VL +++A FF+ + +S G+ TY
Sbjct: 273 SWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGL-KSEGYKPGTVTY 331
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+L +FG+A S V M+E DAVTY V+ AG + + + M
Sbjct: 332 NALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMAS 391
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K P V+YT + + +A +++ +M++ G PN TY ++ L + EE
Sbjct: 392 KGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEE 451
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
++I M+ G P+ N ++ C K G + + + R MK F +
Sbjct: 452 MMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLIS 511
Query: 250 TF-KVADENDSLLWQ---VHPQFSPEFISDN------------DAVEFVTTDIEG----P 289
+ + ND+ + FSP + N A E V D+ P
Sbjct: 512 AYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRP 571
Query: 290 LSIDQGL-VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
L V K N+ I+ + I D I ++ T++ N R G AF
Sbjct: 572 SETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAF 631
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ K + +++ I K N + + E++ + AG + L+
Sbjct: 632 QALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARG 691
Query: 409 RRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A ++ +L + +Y +I + G + ++I M G+ P + T+
Sbjct: 692 GDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTY 751
Query: 467 NVLLAGLEKLGRVSD 481
N ++G G ++
Sbjct: 752 NTFISGYAAQGMFTE 766
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 177/449 (39%), Gaps = 67/449 (14%)
Query: 47 EKAWLFFNWVSRSRGFNH---DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVT 103
EKA L F W + G + DR M+ I G + + +F+++ +D
Sbjct: 165 EKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRA 224
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVY 159
YT+++H S G A+ I+E M P++V+Y Y K+ D++ E D
Sbjct: 225 YTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLD-- 282
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
EM RGL + +T + ++ R G +EA E FS ++ G +P N L+ KA
Sbjct: 283 -EMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKA 341
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G +F EAL +EN+ P+ ++ N+ V
Sbjct: 342 G----------------------IFSEALSVLSEMEENNC---------PPDAVTYNEVV 370
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
V ++ V ID++ S K I ++ +TII
Sbjct: 371 --------------AAYVRAGFHEEGAVVIDAMAS----KGIMPNAVTYTTIINAYGRVG 412
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
D AL F+ +++ Y A++G+L K + ++ +I+ M G S
Sbjct: 413 DIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWN 472
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALKIYKTM 454
++ G ++F E + C T+ LI Y GS + A K+++ M
Sbjct: 473 TMLAMCGKKGMHKYVNQVFR---EMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEM 529
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ G P + T+N LL L + G AE
Sbjct: 530 IKAGFSPCINTYNALLNALARRGDWKAAE 558
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 67/162 (41%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G+ D +ML IF + + L+ + G+ D VT+ S+M + GD
Sbjct: 635 QKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDC 694
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + ++ P +VSY +K ++E + EM G+ P +TY
Sbjct: 695 WKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTF 754
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ G + E ++ S M +P++ I+ + CKA
Sbjct: 755 ISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKA 796
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ +++D++ + V ++Q G D V+Y +V+ G +
Sbjct: 673 GLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEG 732
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I EM P I +Y ++ E DV MI PN TY ++ +
Sbjct: 733 IRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADG 792
Query: 181 LVRAGKYEEALEIFSKMQE 199
+A +Y+EA++ SK+++
Sbjct: 793 YCKARRYDEAIDFVSKIKD 811
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TY +L + A ++ F M+E+ + ID VTYT+++H G++
Sbjct: 246 RGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKR 305
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ EM + P+ +Y A +++L D V+ A +++EM+++G PN TY V++
Sbjct: 306 ARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIR 365
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L AG ++A+E +M+ G +P+ N+ I C AG+ + + M + L
Sbjct: 366 GLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSL 423
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++AW FF + + R D TYTTM+ FG I + VF M +GI TY
Sbjct: 268 LKEAWEFFLQM-KEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYN 326
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L V+ AV ++EEM K P + +Y ++ LF + +A + + M
Sbjct: 327 AMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTD 386
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G PN TY V + Y AG E+ L +F KM + G P+ N+LI
Sbjct: 387 GCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQ-GSLPNLDTYNVLI 433
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 90/458 (19%), Positives = 166/458 (36%), Gaps = 88/458 (19%)
Query: 19 SAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDI 75
S + L L +++ V++VLK H P KA FF + + H ++ +DI
Sbjct: 64 SLRGSLHGLQLQFTPELVDKVLKRLWFHGP--KALQFFKHLEYHPSYAHSASSFDHAIDI 121
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
G + ++ + M+ + I + T+ + AG D A+ ++ M+ C
Sbjct: 122 AGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQD 181
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ S+ + IL + RV+ A + ++++ + +Y ++ + +ALE+
Sbjct: 182 LHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLK 241
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
+M E G+ P NIL++ +AG+ + MKE + + + + F V
Sbjct: 242 EMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVG 301
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
E +K+ V + + G
Sbjct: 302 E--------------------------------------------IKRARKVFNEMVGEG 317
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
I+ +A + +I+V C + A+L FE VK T Y +I L
Sbjct: 318 ILP-----STATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGN 372
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALI 435
K E +E M G V TY I
Sbjct: 373 MDKAMEFIERMKTDGCEPNV---------------------------------QTYNVAI 399
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ AG +K L +++ M +G P+L T+NVL++ +
Sbjct: 400 RYFCDAGDVEKGLSMFEKMG-QGSLPNLDTYNVLISAM 436
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 82/173 (47%), Gaps = 7/173 (4%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEAKRISSMKYVFELMQEKG 96
QVL +E A L F + + +G+ + TY ++ +F +M+++ E M+ G
Sbjct: 330 QVLCKKDSVENAVLMFEEMVK-KGYVPNLTTYNVVIRGLFHAGNMDKAMEFI-ERMKTDG 387
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE-- 154
+ TY + + +AGDV+ ++++E+M + P + +Y + +F+ + ++
Sbjct: 388 CEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMG-QGSLPNLDTYNVLISAMFVRKKSEDLV 446
Query: 155 -ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
A + EM+ RG P +T+ ++ L+ G A EI + G P +
Sbjct: 447 VAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKCGRLPRQ 499
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 10/190 (5%)
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
IL K K + + L ++ + D + I C +R AL + V+ L
Sbjct: 191 ILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTP 250
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
T Y L+ + + E +M + + V ++H G A K+F
Sbjct: 251 TITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVF 310
Query: 419 S------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ +LP TATY A+I V S + A+ +++ M +KG P+L T+NV++ G
Sbjct: 311 NEMVGEGILPS----TATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRG 366
Query: 473 LEKLGRVSDA 482
L G + A
Sbjct: 367 LFHAGNMDKA 376
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 173/428 (40%), Gaps = 35/428 (8%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+++ F + + + E+++ G D +TY ++ +G++D A+ +
Sbjct: 141 DVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVL 200
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E M + P +V+Y ++ L + ++KEA +V +QR P+ TYT+L+E
Sbjct: 201 ERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCND 257
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK----ENRLALR 240
+A+++ +M++ G +PD N+LI CK G I L M + +
Sbjct: 258 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITH 317
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + T + D L + SP ++ N + F L
Sbjct: 318 NIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINF------------------L 359
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+K+ L +L + +S + ++ C ++ D A+ E V +
Sbjct: 360 CRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDI 419
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-- 418
Y L+ L K EI+ +++ G S + +I L + AA++
Sbjct: 420 VTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEE 479
Query: 419 ----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
L P+ TY+ L+ G D+A+KI+ M I PS T+N ++ GL
Sbjct: 480 MRRKGLKPD----IITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 535
Query: 475 KLGRVSDA 482
K + S A
Sbjct: 536 KAQQTSRA 543
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ E+M +G D VTY +++ L G D A
Sbjct: 379 GCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAA 438
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V I ++ K C P +++Y + L + + A ++ +EM ++GL P+ TY+ L+
Sbjct: 439 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRG 498
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L GK +EA++IF M+ ++P N ++ CKA +T I L YM E
Sbjct: 499 LGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE 552
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG D TY T+L + + + + + KG + +TY +V+ L+ G +
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 471
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EEM+ K P I++Y+ ++ L +V EA ++ +M + P+ TY +M
Sbjct: 472 YAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 531
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
L +A + A++ + M E G +P KA ILIE
Sbjct: 532 LGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE 567
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 6/277 (2%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYT 70
K D A +L+ + + D T N +L++ K + R R D TYT
Sbjct: 189 KSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYT 248
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+++ + + + M++KG D VTY +++ + G +D A+ M L
Sbjct: 249 ILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLY 308
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P ++++ ++ + R +A + +M+++G P+ T+ +L+ +L R A
Sbjct: 309 GCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRA 368
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEA 247
+++ KM + G P+ + N L+ C+ + I L M + Y A
Sbjct: 369 IDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 428
Query: 248 LQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVT 283
L AD +L Q+ + SP I+ N ++ +T
Sbjct: 429 LCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLT 465
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 159/385 (41%), Gaps = 34/385 (8%)
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+++ L N ++E + MI +G P+ T L+ R+GK +A I ++ +G
Sbjct: 113 HLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSG 172
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY-PVFKEALQTFKVADENDSL 260
PD N+LI CK+GE + +L M + Y + + + K+ + + L
Sbjct: 173 AVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVL 232
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI-LLKKK----NLVAIDSLLSG 315
Q+ + P+ I+ +E D + Q + L+ ++KK ++V + L++G
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDS----GVGQAMKLLDEMRKKGCKPDVVTYNVLING 288
Query: 316 IMDKSIQLDSAVI-----------------STIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
I K +LD A+ + I+ C R A ++ +
Sbjct: 289 IC-KEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ LI L + + +++E+M K G L+H ++ A +
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407
Query: 419 SLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++ + C TY L+ G AD A++I + KG P L T+N ++ GL K
Sbjct: 408 EIMV-SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTK 466
Query: 476 LGRVSDAEIYRKE--KKSIQADALS 498
+G+ A +E +K ++ D ++
Sbjct: 467 VGKTEYAAELLEEMRRKGLKPDIIT 491
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
+ A N +S S+G + TY T++D + + + E M+ KG+ D +TY++
Sbjct: 436 DAAVEILNQLS-SKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYST 494
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L G VD A+ I+ +M+ P+ V+Y A M L + A D M+++G
Sbjct: 495 LLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 554
Query: 167 LPPNCYTYTVLME 179
P TYT+L+E
Sbjct: 555 CKPTKATYTILIE 567
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 117/315 (37%), Gaps = 57/315 (18%)
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
+ + + LVR G+ EE L+ +M G PD AC LI C++G+TR I+
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+ EN A+ P+ I+ N + E
Sbjct: 168 L-ENSGAV------------------------------PDVITYNVLIGGYCKSGE---- 192
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
ID L + S+ D +TI+ CD + A+ +
Sbjct: 193 -----------------IDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
++ + + Y LI + + ++++EM K G V +LI+ + R
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295
Query: 412 VPAAKIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A K + +P Q T+ ++ S G A ++ M RKG PS+ TFN+L
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355
Query: 470 LAGLEK---LGRVSD 481
+ L + LGR D
Sbjct: 356 INFLCRKRLLGRAID 370
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 169/394 (42%), Gaps = 30/394 (7%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC--YPTIVSYTAYMKILFLN 149
M+E GI+ Y S+MH + + + + ++E +LKEC P+I+SY + +
Sbjct: 394 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFE--RLKECGFKPSIISYGCLLNLYVKI 451
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+V +A + KEM G+ N TY++L+ + + A IF +M +G+QPD+A
Sbjct: 452 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 511
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
N+LIE CK G I IL M++ R+ F+ ++ + VA + S L +
Sbjct: 512 NLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTL----- 566
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
+ + + V V T L+ L++K + S+L + I + +
Sbjct: 567 -DLMRRSGCVPTVMT--------YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYT 617
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMD---LNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
I+ + AFEY K+ L L+ Y L+ K + EM
Sbjct: 618 IIMR---GYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 674
Query: 387 TKAGHSLGVYLGALLIHRLGSARRP--VPAAKIFSLLPED--QKCTATYTALIGVYFSAG 442
+ ++ +LI G ARR A + + ED TYT+ I AG
Sbjct: 675 SFQKIPRNTFIYNILID--GWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAG 732
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+A K+ + M G+ P++ T+ L+ G ++
Sbjct: 733 DMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARV 766
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 7/231 (3%)
Query: 7 NVY-KILKYSTWDSAQDLLKNLPIKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRG 61
N+Y KI K + S +++ IK ++ T +N + H A+ F + RS G
Sbjct: 446 NLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHD-FANAFAIFEEMLRS-G 503
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
DR Y +++ F + + + E MQ++ + + ++ + AGD+ A+
Sbjct: 504 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSAL 563
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ + M+ C PT+++Y A + L +V+ A V +M G+ PN +TYT++M
Sbjct: 564 DTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGY 623
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+G +A E F+K++E+G++ D L+ CCK+G ++ + + R M
Sbjct: 624 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREM 674
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 7/198 (3%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA+ +F + S G D + Y T+L ++ R+ S V M + I + Y +
Sbjct: 631 KAFEYFTKIKES-GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 689
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + GDV A ++ ++MK P I +YT+Y+ ++ A V +EM+ GL
Sbjct: 690 IDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 749
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI-----EKCCKAGET 222
PN TYT L++ R + AL+ F +M+ AG++PD+A+ + L+ G T
Sbjct: 750 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGST 809
Query: 223 RT-IILILRYMKENRLAL 239
T II + R M EN L +
Sbjct: 810 YTGIISVCREMSENDLTV 827
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G H+ TY+ +++ F ++ +FE M G+ D Y ++ G++D
Sbjct: 466 SCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMD 525
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I E+M+ + P+ ++ ++ + +K A D M + G P TY L+
Sbjct: 526 RAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALI 585
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
LVR K + A+ + KM AG+ P++ I++ +G+ +KE+ L
Sbjct: 586 HGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 645
Query: 239 LRYPVFKEALQT 250
L +++ L+
Sbjct: 646 LDVYIYETLLRA 657
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ ++ V + M GI + TYT +M + +GD+ A + ++
Sbjct: 580 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 639
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + Y ++ + R++ A V +EM + +P N + Y +L++ R G
Sbjct: 640 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 699
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
EA ++ +M+E GV P+ I CCKAG+
Sbjct: 700 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGD 733
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/487 (19%), Positives = 204/487 (41%), Gaps = 55/487 (11%)
Query: 54 NWVSRSRGFNH----DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMH 109
NW + F R + M+ + + + FE M+ +GI +A +TS++H
Sbjct: 247 NWQAVVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVH 306
Query: 110 WLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
+ A D+ GA++ EEMK + TIV+Y+ + + + A +++KE +
Sbjct: 307 AYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSL 366
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP----------------DKAACNILI 213
N Y+ ++ ++G E A E+ +M+E G+ ++ C ++
Sbjct: 367 NGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVF 426
Query: 214 EKCCKAGETRTII----LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
E+ + G +II L+ Y+K ++A + KE +++ + N + ++
Sbjct: 427 ERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKE-MESCGIKHNNKTYSMLINGFIH 485
Query: 270 PEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
++ A+ E + + ++ +I L+ K N+ +L + + +Q +
Sbjct: 486 LHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRA 545
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMD-LNLERTA--------YLALIGILIKLNTFPK 378
IIE G +A + +D L+L R + Y ALI L++ + +
Sbjct: 546 FRPIIE---------GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 596
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIG 436
++++M+ AG + + +++ ++ A + F+ + E + Y L+
Sbjct: 597 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 656
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADA 496
+G AL + + M + I + +N+L+ G + G V +AE K+ K
Sbjct: 657 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK------ 710
Query: 497 LSKDAVP 503
+D VP
Sbjct: 711 --EDGVP 715
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y ++ F + RI + V M+ +G D VTY ++ L N + A+ +
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVL 195
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+++ L C PT+++YT ++ + + EA + +EM+ RGL P+ YTY ++ + +
Sbjct: 196 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 255
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G ++E ++ ++M G +P+K +ILI C+ G I +L+ M E L
Sbjct: 256 GMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELT 309
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT +++ I+ + E M +G+ D TY +++ + G D + EM
Sbjct: 209 TYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEM 268
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P V+Y+ + L R+ EA V K MI++ L P+ Y+Y L+ L + G+
Sbjct: 269 FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 328
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ A+ I M G PD N ++ CK G + I ++
Sbjct: 329 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLR 374
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 59 SRGFNHDRFTYTTML-DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+RG D +TY ++ + E K V E M +G + VTY+ ++ L G +
Sbjct: 235 ARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAE-MFSRGCEPNKVTYSILISSLCRFGRI 293
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+++ + M KE P SY + L R+ A + MI G P+ Y +
Sbjct: 294 DEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI 353
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ L + G +ALEIF+K++ G P+
Sbjct: 354 LAALCKNGNANQALEIFNKLRGMGCPPN 381
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 88/230 (38%), Gaps = 43/230 (18%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L+ +A + + Y E + KG D + T ++ N +++ A + E ++
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE-SH 132
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN--------------------- 170
P + +Y A + +R++ AT V M RG P+
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 171 ----------CY----TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
C TYT+L+E + G EA+++ +M G+ PD N +I
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 217 CK-----AGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
CK GE + R + N++ Y + +L F DE S+L
Sbjct: 253 CKEGMWDEGEKLVAEMFSRGCEPNKVT--YSILISSLCRFGRIDEAISVL 300
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-- 419
AY A+I K+N +++ M G + ++I L + R+ A K+
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
LL TYT LI G ++A+K+ + M +G+ P + T+N ++ G+ K G
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMW 258
Query: 480 SDAE 483
+ E
Sbjct: 259 DEGE 262
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 196/469 (41%), Gaps = 40/469 (8%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI-DAVTYTSV 107
A +F V+ ++ D T+ ++D ++ R+ +FE M + + VTYT+V
Sbjct: 84 ALGYFKTVAGTK-CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
++ L G +D A+ + + M C P +++Y+ ++ L R + + +EM +RG
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ Y L+ L ++ + +EALE+ M +G P N L+E C++ +
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFR 262
Query: 228 ILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVT 283
+++ M E + Y L D+ +LL Q V + P+ I+ + ++ +
Sbjct: 263 LIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC 322
Query: 284 TD--------IEGPLSI-----------DQGLVLILLK-----KKNLVAIDSLLSGIMDK 319
D +E I + G ++++ +K+ A+ +LL ++D
Sbjct: 323 KDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQAL-ALLRRMIDS 381
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ D + S +I C D A F + + AY ALI L K K
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Query: 380 AEIVEEMTKA-----GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTAL 434
+ E M ++ V G + R+ A R V P+ A+Y AL
Sbjct: 442 VRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG----ASYGAL 497
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
I ++A ++++ + KG +G +NVL+ L K R+SDA
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAH 546
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 190/454 (41%), Gaps = 43/454 (9%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ FTY +++ +A ++ + + M+++GI + V+ L AG A+ +
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM-IQRGLPPNCYTYTVLMEYLVR 183
+ + +C P I+++ + L + RV+EA +++ M PN TYT ++ L +
Sbjct: 89 KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALR 240
GK + A+E+ M E G P+ ++L+E CKAG T +L+ M +
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208
Query: 241 YPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y L + DE L+ + P ++ N +E + +D+ LI
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ----VDRAFRLI 264
Query: 300 LLKKK-----NLVAIDSLLSGIMDKSIQLDSA-----------------VISTIIEVNCD 337
+ + +++ +++++G+ + +LD A STII+ C
Sbjct: 265 QVMSERGCPPDVINYNTVIAGLC-RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCK 323
Query: 338 HRRRD------GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
R D A E + Y +I L + + ++ M +
Sbjct: 324 DWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEV 383
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKAL 448
+ +++I L + A KIF ++ E ++C Y ALI G DKA+
Sbjct: 384 VPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE-RECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++++ M + P + T+N +L GL +GR+ +A
Sbjct: 443 RVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEA 475
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S + + K+H ++ A+ F +S R + Y ++D + + VFELM
Sbjct: 391 SMVIGSLCKSHD-LDAAYKIFGMMS-ERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
E TY SV+ L G ++ AV + E M KEC+P SY A ++ L V
Sbjct: 449 VES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+EA ++++ + +G Y VL+ L + + +A + +K+ EAG
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 131/318 (41%), Gaps = 28/318 (8%)
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ LVRAG++ +A+++F +E P++ LI CKAG+ +L M++ +
Sbjct: 5 LNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61
Query: 238 ----ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
A+ V + + + D + +P+ I+ N
Sbjct: 62 PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNI---------------- 105
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI-STIIEVNCDHRRRDGALLAFEYSV 352
LV L+K + + + S L + V +T+I C + D A+ +
Sbjct: 106 --LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMN 163
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ Y L+ L K K +++EMT+ G V + L++ L +RR
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLD 223
Query: 413 PAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A ++ L+ TY +L+ ++ + D+A ++ + M +G P + +N ++
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283
Query: 471 AGLEKLGRVSDAEIYRKE 488
AGL + R+ DA+ K+
Sbjct: 284 AGLCRDARLDDAQALLKQ 301
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 13 KYSTWDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDR 66
+ W+SA+ LLK + +K SY +++L + +KA+ + S G DR
Sbjct: 206 RAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS-GVRPDR 264
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
Y M+D FG+ + F+ M+E+GI D VT+ +++ G D A+ +++E
Sbjct: 265 HFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDE 324
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M+ C +Y + +L R + + EM ++GL PN TYT L++ R+G+
Sbjct: 325 MRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGR 384
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++EA++ M+ G++P + L+ + G + +++ M+ + L V
Sbjct: 385 FKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNS 444
Query: 247 ALQTF----KVADENDSLLWQVHPQFSPEFIS 274
+ F ++A+ L + P+ I+
Sbjct: 445 LINAFGEDRRIAEAFSVLQFMKENGLRPDVIT 476
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 163/398 (40%), Gaps = 29/398 (7%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E + DA ++ ++ + A D A+ + + P + TA + L RV
Sbjct: 81 ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 140
Query: 154 EATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EA ++ E G + P Y L++ V+ G + A ++ +M + GV PD+A ++L
Sbjct: 141 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLL 200
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ----VHPQF 268
++ +AG + ++L+ M+ + + VF L F+ D WQ V +
Sbjct: 201 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFR-----DRGEWQKAFAVLREM 255
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSA 326
+ + V D G K N + A+D+ + ++ I+ D
Sbjct: 256 HASGVRPDRHFYNVMIDTFG--------------KYNCLGHAMDA-FDRMREEGIEPDVV 300
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+T+I+ +C R D A+ F+ + + L T Y +I +L + + V ++ EM
Sbjct: 301 TWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEM 360
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSA 444
+ G + L+ G + R A + D + + Y AL+ Y G A
Sbjct: 361 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLA 420
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D AL + K M G+ S N L+ + R+++A
Sbjct: 421 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEA 458
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + TYTT++D++G + R E M+ G+ + Y ++++ + G
Sbjct: 361 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAYAQRGLA 420
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+N+ + M+ + V + + + R+ EA V + M + GL P+ TYT L
Sbjct: 421 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 480
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M+ L+R ++E+ I+ +M +G PD+ A +L LRYMK R+
Sbjct: 481 MKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSA-------------LRYMKHMRV 527
Query: 238 A 238
A
Sbjct: 528 A 528
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 137/332 (41%), Gaps = 18/332 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D + A R S + + + M+ G+ + ++ ++ + G+ A
Sbjct: 189 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKA 248
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM P Y + + + A D + M + G+ P+ T+ L++
Sbjct: 249 FAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDA 308
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+++ A+E+F +M+E+ NI+I + + +L MKE L
Sbjct: 309 HCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 368
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + L V+ + S F D +E + D P S ++
Sbjct: 369 IITY--------------TTLVDVYGR-SGRFKEAVDCIEAMKADGLKPSSTMYHALVNA 413
Query: 301 LKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
++ L A++ ++ + ++ + V++++I + RR A ++ + L
Sbjct: 414 YAQRGLADHALN-VVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRP 472
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ Y L+ LI++ F KV I EEM +G
Sbjct: 473 DVITYTTLMKALIRVEQFEKVPVIYEEMITSG 504
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 161/417 (38%), Gaps = 24/417 (5%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
++ ++ F A+ + + Q G+ + T+++ L +A V A ++ E
Sbjct: 91 FSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFF 150
Query: 129 LK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L E P +Y A +K +K A V EM Q G+ P+ TY++L++ RAG++
Sbjct: 151 LAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRW 210
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL-------- 239
E A + +M+ GV+P + ++ GE + +LR M + +
Sbjct: 211 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVM 270
Query: 240 -----RYPVFKEALQTFKVADEN----DSLLWQVHPQFSPEFISDNDAVEFVTTDIEG-- 288
+Y A+ F E D + W + + A+E E
Sbjct: 271 IDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNC 330
Query: 289 PLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
PL ++I L +++ ++++L+ + ++ + + +T+++V R A+
Sbjct: 331 PLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVD 390
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
E L T Y AL+ + +V+ M G + LI+ G
Sbjct: 391 CIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 450
Query: 407 SARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
RR A + + E+ + TYT L+ +K IY+ M G P
Sbjct: 451 EDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAP 507
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 187/469 (39%), Gaps = 38/469 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
RG + TY ++ + I +F+ M++KGI + Y S+++ G +D
Sbjct: 389 GRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLD 448
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + M + PT SY+ + L N + ++++EM +RG+ N YT+T L+
Sbjct: 449 RARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALI 508
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ K +EA +F KM ++ V P++ N++IE C G R + M E L
Sbjct: 509 NGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLK 568
Query: 239 LRYPVFKEALQ----TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
++ + T V+ N EF++D + V +
Sbjct: 569 PDNYTYRSLISGLCLTSGVSKAN-------------EFVADLENSYAVLNNFS-----LT 610
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ ++ L + + ++LD + I+ ++ + + F +
Sbjct: 611 ALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQ 670
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR------LGSA 408
+ + Y +I L K + ++M G+S +LI+ LGSA
Sbjct: 671 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 730
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
++LP TY + + + G +KA ++ M +G S+ +FN+
Sbjct: 731 ELLCKEMLAGNVLPN----KFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNI 785
Query: 469 LLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAVPMEEKICDLLYGGD 516
L+ GL K G++ +A ++ K I S D + I +L GD
Sbjct: 786 LIKGLCKAGKIQEAIDLMSK----ITESGFSPDCISYSTIIHELCKMGD 830
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 188/479 (39%), Gaps = 59/479 (12%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+S S G +++T + +L + ++ + + +F+ M + G+++D YT+ + +
Sbjct: 176 LSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESR 235
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++DGA + M+ + + V Y M L N RV+EA +V M+ G+ + TY
Sbjct: 236 NLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYR 295
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK-------------CCKAGET 222
L+ R + E AL I M G P +A C+ +I++ CK G+
Sbjct: 296 TLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL 355
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ + Y + F +A + FK E
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFK---------------------------EMA 388
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+E P + +++ L K+ ++ L + DK I++ +++I C
Sbjct: 389 GRGLE-PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 447
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
D A VK L +Y LI L + E+ EM + G + Y L
Sbjct: 448 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 507
Query: 402 IHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
I+ ++ AA++F +++P + T+ +I Y G+ KA ++Y M
Sbjct: 508 INGFCKDKKMDEAARLFDKMIDSNVIPNE----VTFNVMIEGYCLVGNIRKAFQLYDQMV 563
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
G+ P T+ L++GL VS A AD + AV + LLYG
Sbjct: 564 EMGLKPDNYTYRSLISGLCLTSGVSKA-------NEFVADLENSYAVLNNFSLTALLYG 615
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 14 YSTWDSAQDLLKNLPIKWDSYT--VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
Y WD ++ + + S+T V LK H EK+ + F + + +G D YT
Sbjct: 626 YHLWDEMA--VRGVKLDLVSFTIIVYAALKQHDK-EKSCVLFREM-KEQGVKPDDIFYTC 681
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
M+D + + + ++ M G + + VT+T +++ L +G + A + +EM
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P +Y ++ +++A D++ M+Q G + ++ +L++ L +AGK +EA+
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAI 800
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ SK+ E+G PD + + +I + CK G+
Sbjct: 801 DLMSKITESGFSPDCISYSTIIHELCKMGD 830
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G++ + T+T +++ ++ + S + + + M + + TY + + + GD++ A
Sbjct: 706 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 765
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M L+ +IVS+ +K L +++EA D+ ++ + G P+C +Y+ ++
Sbjct: 766 KDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHE 824
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L + G +A E++++M G++PD A NI I C GE+
Sbjct: 825 LCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGES 866
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 154/398 (38%), Gaps = 63/398 (15%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P + +Y A + L N+R +A ++KEM RGL PN TY +L+ L + G E+AL +
Sbjct: 359 PNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCL 418
Query: 194 FSKMQEAGVQ-----------------------------------PDKAACNILIEKCCK 218
F KM++ G++ P A+ + LI C+
Sbjct: 419 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 478
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQ-VHPQFSPEFIS 274
G+ + + + R M E +A F + F K DE L + + P ++
Sbjct: 479 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 538
Query: 275 DNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
N +E + +I + +V + LK N SL+SG+ L S V S
Sbjct: 539 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT-YRSLISGLC-----LTSGV-SKAN 591
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
E D L Y+V + +L AL+ + F + + +EM G
Sbjct: 592 EFVAD--------LENSYAVLNNFSLT-----ALLYGFFREGRFTETYHLWDEMAVRGVK 638
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKI 450
L + ++++ + +F + E + YT +I + +AL
Sbjct: 639 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 698
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ M G P+ T VL+ L K G + AE+ KE
Sbjct: 699 WDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKE 736
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 58/111 (52%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
++ ++ +A +I + + E G + D ++Y++++H L GD++ A +W EM
Sbjct: 782 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 841
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
K P +V+Y +++ ++ +A +Y MI+ G+ PN TY L+
Sbjct: 842 LYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 892
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
++FTY LD F + K + M + G V++ ++ L AG + A+++
Sbjct: 745 NKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLM 803
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++ P +SY+ + L + +A +++ EM+ +GL P+ Y + + +
Sbjct: 804 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 863
Query: 185 GKYEEALEIFSKMQEAGVQPD 205
G+ ++AL I++ M +GVQP+
Sbjct: 864 GESDKALGIYTNMIRSGVQPN 884
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 29 IKWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
I W++YT +N K E A LF + + N T+ M++ + I
Sbjct: 497 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE--VTFNVMIEGYCLVGNIRK 554
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+++ M E G+ D TY S++ L V A +++ S TA +
Sbjct: 555 AFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLY 614
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
F R E ++ EM RG+ + ++T+++ ++ E++ +F +M+E GV+P
Sbjct: 615 GFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKP 674
Query: 205 D 205
D
Sbjct: 675 D 675
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 182/432 (42%), Gaps = 32/432 (7%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +++ ++ F ++ F + + G + VT+ +++H L V A++++
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M C P +V++T M L RV EA + M++ GL PN TY +++ + +
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 185 GKYEEALEIFSKMQE-AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
G AL + KM+E + ++PD + +I+ K G + M++ +
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + F + + W + E + + + VT GL+ L+K+
Sbjct: 190 YSCMINGFCSSGK-----WSEAQRLLQEMLVRKISPDVVTF---------SGLINALVKE 235
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT-- 361
+L + LL ++ + + +T+++ CD + AL F+ K ++++ T
Sbjct: 236 GDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHA 295
Query: 362 ---------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
Y LI LI F + E+ EEM G + +I+ L R
Sbjct: 296 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLD 355
Query: 413 PAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A ++F + T+ LI Y AG D L+++ M R+GI + T+ L+
Sbjct: 356 EATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLI 415
Query: 471 AGLEKLGRVSDA 482
G K+G ++ +
Sbjct: 416 RGFRKVGNINGS 427
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 170/401 (42%), Gaps = 72/401 (17%)
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
+PT+V++ + L + DRV EA D++ +M + PN T+T LM L R G+ EA+
Sbjct: 47 HPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVA 102
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE-----NRLALRYPVFKEA 247
+ +M E G+QP++ +++ CK G+T + + +LR M+E + + +
Sbjct: 103 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGL 162
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAV-----------------EFVTTDIEGPL 290
+ + D + + P+ ++ + + E + I +
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
GL+ L+K+ +L + LL ++ + + +T+++ CD + AL F+
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282
Query: 351 SVKMDLNLERT-----------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
K ++++ T Y LI LI F + E+ EEM G
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG--------- 333
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
++P+ T TY+++I D+A +++ +M K
Sbjct: 334 --------------------IVPD----TVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA-EIY-RKEKKSIQADALS 498
P++ TFN L+ G K G V D E++ ++ I A+A++
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D TY+ M++ F + + S + + + M + I+ D VT++ +++ L GD+
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-----------RG 166
+ A ++ +EM P +V+ + L + ++K+A +++K M + G
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG 298
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ P+ TY +L+ L+ GK+ EA E++ +M G+ PD + +I CK
Sbjct: 299 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCK 350
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIK----------------WDSYTVNQVLKTHPPMEKAWL 51
+ ++K +SAQDLL+ + DS + L+ M+K+ +
Sbjct: 229 INALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMM 288
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+ G D TY ++ + + ++E M +GI D VTY+S+++ L
Sbjct: 289 DIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGL 348
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+D A +++ M K P IV++ + V + +++ EM +RG+ N
Sbjct: 349 CKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANA 408
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
TY L+ + G +L+IF +M +GV PD
Sbjct: 409 ITYITLIRGFRKVGNINGSLDIFQEMISSGVYPD 442
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 11/185 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV-----------TYTSV 107
S G + T T+LD ++ ++ +F+ MQ+ ++IDA TY +
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L N G A ++EEM + P V+Y++ + L R+ EAT ++ M +
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
PN T+ L+ +AG ++ LE+F +M G+ + LI K G +
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429
Query: 228 ILRYM 232
I + M
Sbjct: 430 IFQEM 434
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY++M++ + R+ +F+ M K + + VT+ +++ AG VD
Sbjct: 332 RGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDD 391
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ EM + ++Y ++ + + D+++EMI G+ P+ T ++
Sbjct: 392 GLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLT 451
Query: 180 YLVRAGKYEEALEIFSKMQ 198
L + ++AL + ++Q
Sbjct: 452 GLWSKEELKKALAMLEELQ 470
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +N + K E +F + S+S F+ + T+ T++ + +A + +F M
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKS--FSPNIVTFNTLITGYCKAGMVDDGLELFCEM 399
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+GI +A+TY +++ G+++G+++I++EM YP ++ + L+ + +
Sbjct: 400 GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 459
Query: 153 KEATDVYKEM 162
K+A + +E+
Sbjct: 460 KKALAMLEEL 469
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 87/162 (53%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG D +TY T+++ IS K +F+ M++KG + VTYTS++H L + ++D
Sbjct: 184 NRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLD 243
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + EEMK + P + +Y++ M L +A + + M ++ PN TY+ L+
Sbjct: 244 EAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLI 303
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L + K EA+EI +M+ G++P+ +I C AG
Sbjct: 304 NGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAG 345
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 186/472 (39%), Gaps = 36/472 (7%)
Query: 30 KWDSYTVN----QVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRIS 83
KW N Q++K + KA F+ + GF HD T+ ++ +
Sbjct: 8 KWPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFR 67
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + E M+++ + + S+ A+ ++ +M+ + PT +Y +
Sbjct: 68 PAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTIL 127
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK-YEEALEIFSKMQEAGV 202
IL + VK A Y+EM + G+P + + +L++ L + + + AL IF +M G
Sbjct: 128 DILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGC 187
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
QPD LI C+ G + + M++ + + + ++ D +
Sbjct: 188 QPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIG 247
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ E DIE + L+ L K + LL +MDK
Sbjct: 248 LLE--------------EMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLE-VMDKKHH 292
Query: 323 LDSAVI-STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
L + V ST+I C R+ A+ + L Y +I L ++ + A
Sbjct: 293 LPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAAN 352
Query: 382 IVEEM-------TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA----T 430
++EM +A SL V + +++ L + P A +++ L +C + T
Sbjct: 353 FIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLY--LSMRTRCISVEIDT 410
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ L+ + G KA +I + M G P G +NV++ GL +V +A
Sbjct: 411 FDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREA 462
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 4/194 (2%)
Query: 29 IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK D YT N ++ M++ F + + +G D TY +++D + K +++
Sbjct: 261 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK-QGIIPDVVTYNSLMDGYCLVKEVNTA 319
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
K +F M + G+N D +Y +++ VD A+N++ EM K P +V+Y + +
Sbjct: 320 KSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDG 379
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + R+ A + +M RG+PPN TY +++ L + + ++A+ + +K ++ G+QP
Sbjct: 380 LSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPS 439
Query: 206 KAACNILIEKCCKA 219
ILI+ CK
Sbjct: 440 MYTYTILIDGLCKV 453
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 119/242 (49%), Gaps = 11/242 (4%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAV 102
+ +A+LF + + + GF+ D+ +Y T+ I G K + + +L+Q K + ++AV
Sbjct: 141 IHQAFLFHDKLV-ALGFHLDQVSYGTL--IHGLCK-VGETRAALDLLQRVDGKLVQLNAV 196
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
Y +V++ + V+ A +++ EM K P +V+Y+A + F+ ++K+A D++ ++
Sbjct: 197 MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKI 256
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
I + P+ YT+ +L++ + K +E +F+ M + G+ PD N L++ C E
Sbjct: 257 ILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEV 316
Query: 223 RTIILILRYMKE---NRLALRYPVFKEALQTFKVADENDSLLWQVH-PQFSPEFISDNDA 278
T I M + N Y + K D+ +L ++H P ++ N
Sbjct: 317 NTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSL 376
Query: 279 VE 280
++
Sbjct: 377 ID 378
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK----GINIDAVTYTSVMHWLSNAG 115
RG + F ++ F + I + L +K G ++D V+Y +++H L G
Sbjct: 115 RGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVG 174
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A+++ + + K V Y + + + V +A D+Y EM+ +G+ PN TY+
Sbjct: 175 ETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 234
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
L+ GK ++A+++F+K+ ++PD NIL++ CK
Sbjct: 235 ALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCK 277
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 21/182 (11%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
FN +++ G N D +Y +++ F + K++ +F M K I + VTY S++ LS
Sbjct: 323 FNTMAQG-GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLS 381
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+G + A+ + ++M + P I++Y + + LF +V +A + + +G+ P+ Y
Sbjct: 382 KSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMY 441
Query: 173 TYTVLMEYLVRA--------------------GKYEEALEIFSKMQEAGVQPDKAACNIL 212
TYT+L++ L + G ++EAL + SKM+++ P+ I
Sbjct: 442 TYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEIT 501
Query: 213 IE 214
I
Sbjct: 502 IR 503
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 143/356 (40%), Gaps = 59/356 (16%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+SY++ N+ V +A ++ ++++ P + + ++ LV++ Y L +
Sbjct: 50 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
KM+ G++P+ CNILI C+ G + Q F
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPC---------------------QIHQAFLFH 148
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
D+ +L + + D V + T L+ L K A LL
Sbjct: 149 DKLVALGFHL------------DQVSYGT------------LIHGLCKVGETRAALDLLQ 184
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI-GILI-- 371
+ K +QL++ + +T+I C + + A + V ++ Y ALI G +
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244
Query: 372 ----KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI-FSLLPEDQK 426
++ F K+ I+E + G++ + + R + V A + ++P+
Sbjct: 245 KLKDAIDLFNKI--ILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD--- 299
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY +L+ Y + A I+ TM + G++P + ++N+L+ G K+ +V A
Sbjct: 300 -VVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 354
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 159/405 (39%), Gaps = 27/405 (6%)
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
I+ ++Y+S + DVD AV+++ + + P + + L + +
Sbjct: 49 INFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSL 108
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAG----KYEEALEIFSKMQEAGVQPDKAACNILIE 214
++M RG+ PN + +L+ + G + +A K+ G D+ + LI
Sbjct: 109 SQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIH 168
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSP 270
CK GETR + +L+ + + L ++ + V D D V SP
Sbjct: 169 GLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISP 228
Query: 271 EFISDNDAVE--FVTTDIEGPLSIDQGLVL-----------ILL----KKKNLVAIDSLL 313
++ + + FV ++ + + ++L IL+ K + + ++
Sbjct: 229 NVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 288
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
+ +M + I D +++++ C + + A F + +N + +Y LI K+
Sbjct: 289 AMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKI 348
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATY 431
K + EM V LI L + R A ++ + + TY
Sbjct: 349 KKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTY 408
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
++I F DKA+ + +GI PS+ T+ +L+ GL K+
Sbjct: 409 NSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV 453
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 72/163 (44%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + + TY+ ++ F ++ +F + + I D T+ ++ +
Sbjct: 223 SKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 282
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
++ M + P +V+Y + M L V A ++ M Q G+ P+ +Y +L+
Sbjct: 283 EGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 342
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ K ++A+ +F++M + P+ N LI+ K+G
Sbjct: 343 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGR 385
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
++ + KTH + L + + +G +TYT ++D L + +
Sbjct: 412 IDALFKTHQVDKAIALITKF--KDQGIQPSMYTYTILID---------------GLCKVE 454
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G +I TY ++H G D A+++ +MK C P V+Y ++ L N+ +A
Sbjct: 455 GYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKA 514
Query: 156 TDVYKEMIQRGL 167
+++EMI RGL
Sbjct: 515 EKLFREMITRGL 526
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 21/177 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FN + + + TY +++D ++ RIS + + M ++G+ + +TY
Sbjct: 351 VDKAMNLFNEM-HCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYN 409
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI-- 163
S++ L VD A+ + + K + P++ +YT + L + + Y MI
Sbjct: 410 SIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHG 469
Query: 164 --QRGL----------------PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
++GL PN TY + + L+ + ++A ++F +M G+
Sbjct: 470 FCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 189/486 (38%), Gaps = 58/486 (11%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
S W +++LK I D T N VL EK+ + +S G+ TY T
Sbjct: 176 SVWSFLKEMLKR-KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS-GYAPTIVTYNT 233
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + + R + + + M+ KG++ D TY ++H L + + + +M+ +
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 293
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+P V+Y + +V A+ + EM+ GL PN T+ L++ + G ++EAL
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 353
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL 248
++F M+ G+ P + + +L++ CK E MK N + + Y + L
Sbjct: 354 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
DE LL + S + I D D V + L+ K
Sbjct: 414 CKNGFLDEAVVLL----NEMSKDGI-DPDIVTY------------SALINGFCKVGRFKT 456
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++ I + + + ST+I C A+ +E + + + L+
Sbjct: 457 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 516
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
L K + E + MT G +LP T
Sbjct: 517 SLCKAGKVAEAEEFMRCMTSDG-----------------------------ILPN----T 543
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
++ LI Y ++G KA ++ M + G HP+ T+ LL GL K G + +AE + K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 489 KKSIQA 494
++ A
Sbjct: 604 LHAVPA 609
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 172/452 (38%), Gaps = 59/452 (13%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ ++G +Y +LD + + + M+ G+ + +TYT ++ L
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G +D AV + EM P IV+Y+A + R K A ++ + + GL PN Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ L+ R G +EA+ I+ M G D N+L+ CKAG+ +R M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 235 NRLALRYPVFK----------EALQTFKVADENDSLLWQVHPQFSP---------EFISD 275
+ + F E L+ F V DE + HP F +
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV--GHHPTFFTYGSLLKGLCKGGHL 594
Query: 276 NDAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+A +F+ + P ++D L+ + K NL SL ++ +SI DS +++
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654
Query: 332 IEVNCDHRRRDGALL-AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
I C + A+L A E + ++ + Y + + K + E+M G
Sbjct: 655 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 714
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
H+ P+ T A+I Y G +K +
Sbjct: 715 HT-----------------------------PD----IVTTNAMIDGYSRMGKIEKTNDL 741
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M + P+L T+N+LL G K VS +
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 29 IKWDSYTVNQVL-KTHPPMEKAWLF-FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
++ D YT N ++ K E W F V S G + D+ T M+ + R +
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
V M ++GI+ ++ Y +++ L GD+ A + EEM + P V+ +A ++ L
Sbjct: 880 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ EAT + + M++ L P ++T LM + G EALE+ M G++ D
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 207 AACNILIEKCCKAGE 221
+ N+LI C G+
Sbjct: 1000 VSYNVLITGLCAKGD 1014
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
++ YT +D +A + + Y E M G D VT +++ S G ++ ++
Sbjct: 683 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P + +Y + V + +Y+ +I G+ P+ T L+ + +
Sbjct: 743 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
E L+I GV+ D+ N+LI KCC GE
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 20 AQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTM 72
A+ LK+L P D+ N +L K+ + LF V RS D +TYT++
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS--ILPDSYTYTSL 654
Query: 73 LD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+ + + K + ++ + E + + V YT + + AG + E+M
Sbjct: 655 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 714
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P IV+ A + ++++ D+ EM + PN TY +L+ + +
Sbjct: 715 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 774
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKA 219
++ + G+ PDK C+ L+ C++
Sbjct: 775 LLYRSIILNGILPDKLTCHSLVLGICES 802
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 69/167 (41%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA ++F + G D T M+D + +I + M + + TY +
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H S DV + ++ + L P ++ + + + ++ ++ + K I RG+
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ YT+ +L+ G+ A ++ M G+ DK C+ ++
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 160/424 (37%), Gaps = 83/424 (19%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N D + +++ F E+ + S F MQE G+ TY +++ AG + +
Sbjct: 78 GMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEES 137
Query: 121 VNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
V + E M + P + +Y ++ R+ EA +V +MI G+ P+ TY +
Sbjct: 138 VKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIAT 197
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G ++A + +MQ GVQP++ C I++ CK G R + MKE +
Sbjct: 198 AYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHP 257
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+F ++ F VA I D D V
Sbjct: 258 NLVIFNSLIKGF-VA------------------IMDRDGV-------------------- 278
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
D +L+ + + ++ D STI+ + F+ VK + +
Sbjct: 279 ----------DEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPD 328
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
AY L ++ K E++ M K+G V +
Sbjct: 329 AHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVI---------------------- 366
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+T +I + SAG D A++++ MC++GI P+L TF L+ G + +
Sbjct: 367 -----------FTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQP 415
Query: 480 SDAE 483
AE
Sbjct: 416 WKAE 419
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V LM+E G+ D +T++++M+ S AG ++ I+++M P +Y+ K
Sbjct: 281 VLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYV 340
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++A ++ MI+ G PN +T ++ AGK + A+ +F KM + G+ P+
Sbjct: 341 RAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLK 400
Query: 208 ACNILIEKCCKAGETRTIILILRYMKE 234
LI +A + IL+ M E
Sbjct: 401 TFETLIWGFAEARQPWKAEEILQIMTE 427
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 4/189 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T++T+++ + A + + +F+ M + GI DA Y+ + A + + A
Sbjct: 289 GVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKA 348
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ M P +V +T + ++ A V+ +M QRG+ PN T+ L+
Sbjct: 349 EELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWG 408
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
A + +A EI M E VQP+K+ ++ E G T+ +L + R
Sbjct: 409 FAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEANRLLGTRNRKEMTNR 468
Query: 241 YPVFKEALQ 249
KEAL+
Sbjct: 469 ----KEALE 473
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 186/438 (42%), Gaps = 53/438 (12%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++Y T+LD + S + + M ++GI +TY +++ L G D A+ IW
Sbjct: 401 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 460
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M P V Y+ + LF + + A+ ++K+++ RG + T+ ++ L +
Sbjct: 461 HLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
GK EA EIF KM++ G PD LI+ CKA + M+ ++ ++
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMY 580
Query: 245 KEAL----QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS--------- 291
+ ++ ++ + D L +P ++ ++ EG L
Sbjct: 581 NSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCK--EGMLDKAFSSYFEM 638
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ GL N++ +++SG+ + ++D A + +++ DH G E
Sbjct: 639 TENGL------SANIIICSTMVSGLY-RLGRIDEA--NLLMQKMVDH----GFFPDHECF 685
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
+K D I+ K+A+ ++E K + + I L +
Sbjct: 686 LKSD---------------IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 730
Query: 412 VPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
A + FS+L P++ TY LI Y +AG+ D+A ++ M R+G+ P++ T
Sbjct: 731 DDARRFFSMLSLKGFVPDN----FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVT 786
Query: 466 FNVLLAGLEKLGRVSDAE 483
+N L+ GL K V A+
Sbjct: 787 YNALINGLCKSENVDRAQ 804
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 177/429 (41%), Gaps = 66/429 (15%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RGF R T+ TM+ + ++ + +F+ M++ G + D +TY +++ A +V
Sbjct: 500 ARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVG 559
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + M+ + P+I Y + + LF + R+ E TD+ EM RGL PN TY L+
Sbjct: 560 QAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALI 619
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR------YM 232
+ + G ++A + +M E G+ + C+ ++ + G L+++ +
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
++ L+ + A+Q K+AD S+
Sbjct: 680 PDHECFLKSDIRYAAIQ--KIAD-----------------------------------SL 702
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
D+ LL N + + ++G+ K+ ++D A RR ++L+ + V
Sbjct: 703 DESCKTFLL--PNNIVYNIAIAGLC-KTGKVDDA-------------RRFFSMLSLKGFV 746
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ Y LI + + +EM + G + LI+ L +
Sbjct: 747 P-----DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVD 801
Query: 413 PAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A ++F L + TY LI Y G+ D A K+ M +GI PS+ T++ L+
Sbjct: 802 RAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALI 861
Query: 471 AGLEKLGRV 479
GL K G +
Sbjct: 862 NGLCKHGDI 870
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
++ + F ++ KG D TY +++H S AG+VD A + +EM + P IV+Y
Sbjct: 729 KVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYN 788
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
A + L ++ V A ++ ++ Q+GL PN TY L++ + G + A ++ KM E
Sbjct: 789 ALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 848
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYM 232
G+ P + LI CK G+ + +L M
Sbjct: 849 GISPSVVTYSALINGLCKHGDIERSMKLLNQM 880
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 172/426 (40%), Gaps = 29/426 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++++ + + + K V + M EKG++ + VTYT ++ +D A + M
Sbjct: 263 TYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM 322
Query: 128 KLKECY-PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ + P +Y + ++ +A + EM++ GL N + L+ + G+
Sbjct: 323 QEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGE 382
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EA + ++M + ++PD + N L++ C+ G T + M + + +
Sbjct: 383 IHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNT 442
Query: 247 ALQTF-KVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
L+ +V +D+L +W + + V D G ++ G L K +
Sbjct: 443 LLKGLCRVGAFDDALQIWHLMMKXG------------VAPDEVGYSTLLDG----LFKME 486
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
N +L I+ + +T+I C + A F+ + + + Y
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYR 546
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS----- 419
LI K + + ++ M + S + + LI L +RR V + +
Sbjct: 547 TLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIR 606
Query: 420 -LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
L P TY ALI + G DKA Y M G+ ++ + +++GL +LGR
Sbjct: 607 GLTPN----IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGR 662
Query: 479 VSDAEI 484
+ +A +
Sbjct: 663 IDEANL 668
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 7/171 (4%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A FF+ +S +GF D FTY T++ + A + + + M +G+ + VTY
Sbjct: 730 VDDARRFFSMLSL-KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYN 788
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ L + +VD A ++ ++ K +P +V+Y + + A + +MI+
Sbjct: 789 ALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 848
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
G+ P+ TY+ L+ L + G E ++++ ++M +AGV LIE C
Sbjct: 849 GISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSK------LIEYC 893
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 181/447 (40%), Gaps = 30/447 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R F + +L ++ E + YVF+ M + G + S+++ L G+
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++++M P + + + + +V EA K+M G+ PN TY L+
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
V G E A + M E GV + +LI+ CK + +LR M+E +
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALV 329
Query: 240 ----RYPVFKEA-LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
Y V + +T K+ D L + N + G + +
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCK--RGEIHEAE 387
Query: 295 GLVLILLK---KKNLVAIDSLLSG------------IMDKSIQ--LDSAVIS--TIIEVN 335
G++ ++ K + + ++LL G + DK +Q ++ V++ T+++
Sbjct: 388 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 447
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C D AL + +K + + Y L+ L K+ F + + +++ G +
Sbjct: 448 CRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSR 507
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYK 452
+I L + V A +IF + +D C+ TY LI Y A + +A K+
Sbjct: 508 ITFNTMISGLCKMGKMVEAEEIFDKM-KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG 566
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRV 479
M R+ I PS+ +N L++GL K R+
Sbjct: 567 AMEREXISPSIEMYNSLISGLFKSRRL 593
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 65/130 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY +++ +++ + + +F + +KG+ + VTY +++ G++D
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + ++M + P++V+Y+A + L + ++ + + +MI+ G+ Y L++
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897
Query: 180 YLVRAGKYEE 189
+ Y E
Sbjct: 898 GGFKTSNYNE 907
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 195/495 (39%), Gaps = 69/495 (13%)
Query: 11 ILKYSTWDSAQDLLKNL--------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
+LK D+A+ L+ + P +D V+ MEKA F+ + S G
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC--VMSKEGVMEKAKALFDGMIAS-GL 378
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
Y ++++ + K + + M+++ I I TY +V+ + ++GD+DGA N
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
I +EM C P +V YT +K N R +A V KEM ++G+ P+ + Y L+ L
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+A + +EA +M E G++P+ I +A E + +Y+KE R P
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD---KYVKEMRECGVLP 555
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+ L T GL+ K
Sbjct: 556 --NKVLCT--------------------------------------------GLINEYCK 569
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
K+ ++ S ++D+ I D+ + ++ + + D A F + + +
Sbjct: 570 KEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y LI KL K + I +EM + G + V + +L LG R K LL
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML---LGGFCRSGEIEKAKELLD 686
Query: 423 ED-----QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
E TY +I Y +G +A +++ M KG+ P + L+ G +L
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 478 RVSDA-EIYRKEKKS 491
V A I+ KK
Sbjct: 747 DVERAITIFGTNKKG 761
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 170/429 (39%), Gaps = 22/429 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + D TY+ ++D + + + K + M GINI Y + +S G ++
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ M P +Y + ++ V++ ++ EM +R + + YTY ++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + +G + A I +M +G +P+ LI+ + + +L+ MKE +A
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y L K DE S L VE V ++
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFL-----------------VEMVENGLKPNAFTYGA 527
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ ++ + D + + + + + + + +I C + A A+ V
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQG 587
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ + Y L+ L K + EI EM G + V+ +LI+ A+
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
IF + E+ Y L+G + +G +KA ++ M KG+HP+ T+ ++ G
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 474 EKLGRVSDA 482
K G +++A
Sbjct: 708 CKSGDLAEA 716
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 129/605 (21%), Positives = 219/605 (36%), Gaps = 113/605 (18%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLL--KNLPIKWDSYTVNQVLKTHPPMEKAWL--FFNWV 56
+ D + + ILK W +D L NL I+ + V VL++ + + L FFNWV
Sbjct: 31 LSDASAEIAGILKQENW---RDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWV 87
Query: 57 SRSRGFNH--DRFTYTTM-LDIFGEAKRISSMKYVFELMQEK------------------ 95
+ D F++ + L FG ++ S V E M E+
Sbjct: 88 DSQKVTEQKLDSFSFLALDLCNFGSFEKALS---VVERMIERNWPVAEVWSSIVRCSQEF 144
Query: 96 -GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G + D V + + G ++ AV ++ E P + + L +R+
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE---------------------EALEI 193
DVYK M++R + + TY +L+ RAG + AL++
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKL 264
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL---RYPVFKEALQT 250
M G+ P K ++LI+ CK +L M ++L Y + + L
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 251 FKVADENDSLLWQVHPQ---------------FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ AD L+ ++ S E + + F G + Q
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 296 LVLIL---LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
++ ++KN+ LL + ++I + T+++ C DGA + +
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
Y LI ++ + F +++EM + G + ++ LI L A+R
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 413 PAAKIFSLLPED--QKCTATYTALIGVYFSA---GSADK--------------------- 446
A + E+ + TY A I Y A SADK
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 447 -----------ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK-KSIQ 493
A Y++M +GI T+ VL+ GL K +V DA EI+R+ + K I
Sbjct: 565 NEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 494 ADALS 498
D S
Sbjct: 625 PDVFS 629
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 195/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVSSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + + +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + S+L +MDK +
Sbjct: 241 RLVEEM--KGFGIKPNAITYST------------LLPGLCNAEKMTEARSILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I C+ D A + +++ + E Y LI K + +
Sbjct: 287 APTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ AAK +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAK 458
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 143/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTIINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI C +G +L+ M
Sbjct: 263 PGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F A + D + + + I + + P+
Sbjct: 318 -IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPM- 375
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ L ++L+ ++ +Q D ++T+I + D A +
Sbjct: 376 -----IEYLCNNGQAAKAEALVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 430 LRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDH 469
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ ++ K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS--IQADALSKDAV 502
+V A + ++ KS I D ++ + +
Sbjct: 165 KVETANRFFEDMKSREISPDVVTYNTI 191
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 213/512 (41%), Gaps = 81/512 (15%)
Query: 34 YTVNQVLK---THPPMEKAWLFFNWVSRS-RGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
Y +N VLK +KA F+ + R+ D TY T+++ F +AKR++ + +F
Sbjct: 113 YNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLF 172
Query: 90 ELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
E M++ G + VTY+ ++ +G+V + + EEM+ + + Y++ +
Sbjct: 173 EAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCG 232
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
++ +++ EM++R + PN TY+ LM+ L R G++ EA E+ M GV+PD A
Sbjct: 233 EGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVA 292
Query: 209 CNILIEKCCKAGETRTIILILRYM---KENRLALRYPVFKEAL-QTFKVADENDSLLWQV 264
+L + CK G I +L M E L Y V L + ++ D + V
Sbjct: 293 YTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMV 352
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL--ILLKKK-----NLVAIDSLLSGIM 317
P+ ++ N ++ + G I + + L +LL +K ++ ++L+ G+
Sbjct: 353 KKGKKPDAVTYNTLLKGLC----GAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLC 408
Query: 318 DKSIQLDSAVIST----------------IIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
+ D+A I + +IE R+ AL ++Y+V+ +
Sbjct: 409 KEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSM 468
Query: 362 AYLALIGILIKL-----------------------------------NTFPKVAEIVEEM 386
Y +I L K+ ++ + + +EM
Sbjct: 469 TYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528
Query: 387 TKAGHSLGVYL------GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFS 440
H++ V G L + SA+ + + L+P+ T++ LI +
Sbjct: 529 RNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPD----AVTFSILINRFSK 584
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
G D+A+ +Y+ M G P + F+ LL G
Sbjct: 585 LGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKG 616
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 179/437 (40%), Gaps = 27/437 (6%)
Query: 66 RFTYTTML-DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
RFT + L + F S V LM ++G ++ V+ +G D A++++
Sbjct: 76 RFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLF 135
Query: 125 EEMKLK-ECY-PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYL 181
+MK +C P V+Y + R+ EA +++ M + G PN TY+VL++
Sbjct: 136 SQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCY 195
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
++G+ E L + +M+ G++ D + LI C G+ T + M +++
Sbjct: 196 CKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNV 255
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ +Q W+ + E + D A V D+ + GL
Sbjct: 256 VTYSCLMQGLGRTGR-----WRE----ASEMLKDMTA-RGVRPDVVAYTVLADGLC---- 301
Query: 302 KKKNLVAIDSL--LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
KN A D++ L ++ K + + + ++ C R D A E VK +
Sbjct: 302 --KNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPD 359
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL--GVYLGALLIHRLGSARRPVPAAKI 417
Y L+ L + ++ + + + V+ LI L R AA+I
Sbjct: 360 AVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARI 419
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
S + E Q TY LI Y +A +ALK++K G P+ T++V++ GL K
Sbjct: 420 HSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCK 479
Query: 476 LGRVSDAE-IYRKEKKS 491
+ +S A ++ K K S
Sbjct: 480 MQMLSVARGLFCKMKDS 496
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF+ + TY+ M++ + + +S + +F M++ GI + Y ++M L ++ A
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++EM+ +VS+ + VK A ++ EM L P+ T+++L+
Sbjct: 522 RSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINR 581
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ G +EA+ ++ KM G P + L++ GET II +L M + + L
Sbjct: 582 FSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVL 640
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 137/345 (39%), Gaps = 70/345 (20%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G TY +++ + R+ V E+M +KG DAVTY +++ L AG +
Sbjct: 319 KGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHE 378
Query: 120 AVNIWEEMKLKECY---PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
A+++W+ + L E + P + + ++ L RV +A ++ M++ GL N TY
Sbjct: 379 AMDLWK-LLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNF 437
Query: 177 LMEYLVRAGKYEEALEI-----------------------------------FSKMQEAG 201
L+E + A K EAL++ F KM+++G
Sbjct: 438 LIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSG 497
Query: 202 VQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
++P N L+ C+ + R++ +R + N + + + + T K D
Sbjct: 498 IRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDG--TLKAGDVKS 555
Query: 259 S--LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI----------------- 299
+ LL ++ F + + D + +D+ + L
Sbjct: 556 AKELLSEM---FMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDS 612
Query: 300 LLKKKNLVA----IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
LLK L I SLL + DK + LDS + STI+ C R
Sbjct: 613 LLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 158/402 (39%), Gaps = 56/402 (13%)
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++++ L A D V+++ +M P S +A + A V M +
Sbjct: 46 STLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTK 105
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA--GVQPDKAACNILIEKCCKAGET 222
RG N Y ++++ R+G+ ++A+ +FS+M+ V PD N L+ CKA
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKA--- 162
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
RLA +F EA++ K D P ++ + ++
Sbjct: 163 ------------KRLAEARVLF-EAMK--KGGD------------CRPNLVTYSVLIDCY 195
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
E + +GL LL + + ++ D V S++I C +
Sbjct: 196 CKSGE----VGEGL--------------GLLEEMEREGLKADVFVYSSLISAFCGEGDIE 237
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
F+ ++ ++ Y L+ L + + + +E++++MT G V +L
Sbjct: 238 TGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLA 297
Query: 403 HRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
L R A K+ L+ + ++ T TY ++ D A + + M +KG
Sbjct: 298 DGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKK 357
Query: 461 PSLGTFNVLLAGLEKLGRVSDA----EIYRKEKKSIQADALS 498
P T+N LL GL G++ +A ++ EK ++ D +
Sbjct: 358 PDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFT 399
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 179/455 (39%), Gaps = 57/455 (12%)
Query: 52 FFNWVSRSRGFNH--DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMH 109
FF W S+ ++ D F +++L + + ++ + E M+ K + + V+
Sbjct: 80 FFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVIS 139
Query: 110 WLSNAGDVDGAVNIWEE-MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ +G V A+ ++ + + C P + + + + +L + +V+ A VY EM+ R
Sbjct: 140 AYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGD 199
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
+ YT ++ + L + GK EE + K G P+ N LI+ CK G+ L+
Sbjct: 200 VDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLL 259
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
+ +K + + F + +++ D VE +
Sbjct: 260 FKELKVKGFLPTVKTYGAMINAFCKKGKFEAV--------------DKLLVEMKERGLAV 305
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
L I G++ K + + +++ + D A +T+I +C + A
Sbjct: 306 SLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELL 365
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
E++++ L + +Y LI K + + +E++ EM++ GH+L +
Sbjct: 366 EHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLI------------ 413
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
Y AL+ AG D AL + M +GI P +NV
Sbjct: 414 ---------------------AYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNV 452
Query: 469 LLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
L++GL K GR A K + + L ++ P
Sbjct: 453 LMSGLCKKGRFPAA-------KQLLVEMLDQNVTP 480
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 158/435 (36%), Gaps = 62/435 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG ++F+YT ++ F + + M E+G +D + Y +++H L AG+VD
Sbjct: 371 RGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDV 430
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + ++M + P Y M L R A + EM+ + + P+ + L++
Sbjct: 431 ALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVD 490
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+R G +EA ++F E G+ CN +I+ CK G +L
Sbjct: 491 GFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALL------------ 538
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
FK DE F+ I D + D+ G L + GL+L
Sbjct: 539 ---CFKRMFNGVHSPDE-----------FTYSTIIDGYVKQ---NDLRGALRM-FGLMLK 580
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K N+V SL++G C + + A FE
Sbjct: 581 KTCKPNVVTFTSLINGF-------------------CRNGDLNRAEKVFEEMRSFGFEPN 621
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEM----TKAGHSLGVYLGALLIHRLG-------SA 408
Y LIG K K E+M + YL L + G S
Sbjct: 622 VVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSN 681
Query: 409 RRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+P + F ++ D A Y +++ AL+++ M KG P +F
Sbjct: 682 SQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSF 741
Query: 467 NVLLAGLEKLGRVSD 481
LL GL GR+ D
Sbjct: 742 IALLHGLCLEGRLQD 756
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 171/434 (39%), Gaps = 21/434 (4%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T++D + + I +F+ ++ KG TY ++++ G + + EMK
Sbjct: 240 YNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMK 299
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ ++ + + F + EA D + MI+ G P+ TY L+ GK
Sbjct: 300 ERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVR 359
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA E+ G+ P+K + LI K GE +L M E L + +
Sbjct: 360 EAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALV 419
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
VA E D L + D + + + L KK A
Sbjct: 420 HGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSG--------------LCKKGRFPA 465
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
LL ++D+++ D+ V +T+++ H D A F+ +++ ++ A+I
Sbjct: 466 AKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIK 525
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC- 427
K + M HS + + +I A ++F L+ + + C
Sbjct: 526 GYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLK-KTCK 584
Query: 428 --TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
T+T+LI + G ++A K+++ M G P++ T+ +L+ K G+++ A +
Sbjct: 585 PNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFF 644
Query: 486 RKE---KKSIQADA 496
++ K I DA
Sbjct: 645 FEQMLINKCIPNDA 658
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 120/242 (49%), Gaps = 25/242 (10%)
Query: 4 TISNVYKIL-KYSTWDSAQDLLKNLPIKW---DSYTVNQV---LKTHPPMEKAWLFFNWV 56
ISN + L ++ A ++++ + K D+ T ++V L +EKA+ F +
Sbjct: 189 NISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEM 248
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
R+ G D + YTT++D F +A I + F+ M+ G + VTYT+++H +
Sbjct: 249 KRN-GIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRK 307
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL--------- 167
V A ++E M K C P IV+YTA + L ++++A+ +YK M + +
Sbjct: 308 VSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHF 367
Query: 168 --------PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
PN +TY L++ L +A + +EA ++ M G +P+ + LI+ CCKA
Sbjct: 368 RVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKA 427
Query: 220 GE 221
G+
Sbjct: 428 GK 429
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 151/353 (42%), Gaps = 39/353 (11%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+GF D TY+ ++ A ++ +F+ M+ GI D YT+++ AG ++
Sbjct: 215 SKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIE 274
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A N ++EM+ C P +V+YTA + + +V +A +VY+ M+ +G PN TYT L+
Sbjct: 275 QARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALI 334
Query: 179 EYLVRAGKYEEALEIFSKMQEAGV-----------------QPDKAACNILIEKCCKAGE 221
+ L +AGK E+A +I+ M++ V +P+ L++ CKA +
Sbjct: 335 DGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQ 394
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+ +L+ M + V+ + A + D +A E
Sbjct: 395 VKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLD------------------EAQEV 436
Query: 282 VTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
TT +E + L+ L K K L +LS +++ S + + + +I+ C
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ D A + N Y A+I K K E++++M+ G
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKG 549
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 165/406 (40%), Gaps = 36/406 (8%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V M KG D TY+ V+ +L NA V+ A +++EMK P + YT +
Sbjct: 209 VIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFC 268
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+++A + + EM + G PN TYT L+ +++ K +A E++ M G P+
Sbjct: 269 KAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIV 328
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
LI+ CKAG+ I + MK+ + + + F+V D
Sbjct: 329 TYTALIDGLCKAGKIEKASQIYKIMKKENVEI-----PDVDMHFRVVDG----------- 372
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+ N+ F LV L K + LL + + + + V
Sbjct: 373 ------ASNEPNVFTYG----------ALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVV 416
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+I+ C + D A F ++ + Y +LI L K +++ +M
Sbjct: 417 YDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKML 476
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSA 444
+ + V + +I L + A K+ ++ E++ C TYTA+I + +G
Sbjct: 477 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMM-EEKGCNPNVVTYTAMIDGFGKSGRV 535
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
+K L++ + M KG P+ T+ VL+ G + +A +E K
Sbjct: 536 EKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMK 581
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y ++D +A ++ + VF M E G + + TY+S++ L +D A
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +M C P +V YT + L + EA + M ++G PN TYT +++
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDG 528
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
++G+ E+ LE+ +M G P+ +LI CC G +L MK+
Sbjct: 529 FGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRH 588
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
+++ ++ F N + ++ F IS+ND+V
Sbjct: 589 VAGYRKVIEGF-----NREFIASLYLSFE---ISENDSV 619
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 7/213 (3%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY ++D +A ++ + + + M +G + V Y +++ AG +D A ++
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTT 439
Query: 127 MKLKECY--PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M EC P + +Y++ + LF + R+ A V +M++ PN YT +++ L +
Sbjct: 440 ML--ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKV 497
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRY 241
GK +EA ++ M+E G P+ +I+ K+G + +L+ M A + Y
Sbjct: 498 GKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTY 557
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
V + + DE LL ++ + P ++
Sbjct: 558 RVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVA 590
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 147/403 (36%), Gaps = 52/403 (12%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M G +D T H L +G A+++ E+ +E P V YT + L
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASL 57
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+EA D M PN TY +L+ + K I S M G P N
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L+ C++G+ A Y + K+ +Q P
Sbjct: 118 LVHAYCRSGD---------------YAYAYKLLKKMVQC----------------GCQPG 146
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
++ N + + + E P K L + +++ + L+ IS
Sbjct: 147 YVVYNILIGGICSS-EEP------------GKDVLDLAEKAYGEMLEAGVVLNKVNISNF 193
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
C + + A + + + Y +IG L + K ++ +EM + G
Sbjct: 194 SRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGI 253
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKAL 448
+ VY+ LI A A F + D C TYTALI Y + KA
Sbjct: 254 APDVYVYTTLIDSFCKAGFIEQARNWFDEMERD-GCAPNVVTYTALIHAYLKSRKVSKAN 312
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKK 490
++Y+ M KG P++ T+ L+ GL K G++ A +IY+ KK
Sbjct: 313 EVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKK 355
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 164/451 (36%), Gaps = 49/451 (10%)
Query: 61 GFNHDRFTYTTMLDIFGEA-KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G+ D FT L F + + + L++++ D V YT ++ L A +
Sbjct: 5 GYRMDEFT----LGCFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEE 60
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++ M+ C P +++Y + +++ + MI G P+ + L+
Sbjct: 61 AMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVH 120
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR-----YMKE 234
R+G Y A ++ KM + G QP NILI C + E +L L M E
Sbjct: 121 AYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLE 180
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ L + + + + S FI D V + +++
Sbjct: 181 AGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEK 240
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN---CDHRRRDGALLAFEYS 351
L K+N +A D + + +DS + IE D RDG
Sbjct: 241 AFQLFQEMKRNGIAPDVYVYTTL-----IDSFCKAGFIEQARNWFDEMERDGCAPNV--- 292
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
Y ALI +K K E+ E M G + + LI L A +
Sbjct: 293 ---------VTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKI 343
Query: 412 VPAAKIFSLLPE-------------------DQKCTATYTALIGVYFSAGSADKALKIYK 452
A++I+ ++ + ++ TY AL+ A +A + K
Sbjct: 344 EKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLK 403
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+M +G P+ ++ L+ G K G++ +A+
Sbjct: 404 SMSVEGCEPNHVVYDALIDGCCKAGKLDEAQ 434
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N + TYT M+D FG++ R+ + + M KG + VTY +++ + G +D
Sbjct: 513 KGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDE 572
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKIL-FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EEMK + +P V+ Y K++ N + + E+ + P Y VL+
Sbjct: 573 AHKLLEEMK-QTYWPRHVA--GYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLI 629
Query: 179 EYLVRAGKYEEALEI 193
+ ++AG+ E ALE+
Sbjct: 630 DNFIKAGRLEIALEL 644
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 170/418 (40%), Gaps = 40/418 (9%)
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
G K + K + E+M G D TY+ V+ +L NA V+ A +++EMK P +
Sbjct: 466 GFGKFEKAYKVIHEMMG-NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+YT + +K+A + EM++ G P TYT L+ ++A K A E+F
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
M G P+ LI+ CK+G I M+
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR----------------------- 621
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG-LVLILLKKKNLVAIDSLLSG 315
D+ + V F I +N A E P + G LV L K + LL
Sbjct: 622 GDADIPDVDMYFK---IKNNVA--------EKPNVVTYGALVDGLCKAHKVKDARDLLET 670
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ + ++ V +I+ C + D A F V+ N Y +LI L K
Sbjct: 671 MFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKR 730
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYT 432
V +++ +M + + + + +I L + A K+ L+ E++ C TYT
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM-LMMEEKGCKPNVVTYT 789
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
A+I + AG DK L++++ M KG P+ T+ VL+ G + +A +E K
Sbjct: 790 AMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK 847
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 29/317 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y ++D F +A ++ + VF M E G N + TY+S++ L +D
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLV 734
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +M C P IV YT + L + EA + M ++G PN TYT +++
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AGK ++ LE+F +M G P+ +LI CC G +L MK+
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + ++ +K EFI +E V + P +IL
Sbjct: 855 VSSYCKVIEGYK-----------------REFILSLGLLEEVEKNGSAP--------IIL 889
Query: 301 LKKKNLVAIDSLL-SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K V ID+ + +G ++ +++L VIS + + + +F Y+ K+ E
Sbjct: 890 LYK---VLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFE 946
Query: 360 RTAYLALIGILIKLNTF 376
+ G++ L TF
Sbjct: 947 LFYDMIRDGVIPDLGTF 963
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 187/456 (41%), Gaps = 78/456 (17%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++ + +AK++S +FELM KG + +TYT+++ +G+++ A I+ M
Sbjct: 561 TYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Query: 128 -------------KLKECY---PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
K+K P +V+Y A + L +VK+A D+ + M G PN
Sbjct: 621 RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNT 680
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
Y L++ +A K +EA E+F KM E G P+ + LI+ R
Sbjct: 681 IVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLID---------------RL 725
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
K+ RL L V + L+ +P + + ++ ++ +
Sbjct: 726 FKDKRLDLVLKVLSKMLEN----------------SCAPNIVIYTEMIDGLSKVAK---- 765
Query: 292 IDQGLVLILLK-----KKNLVAIDSLLSGI-----MDKSIQL-----------DSAVIST 330
D+ L+L+ K N+V +++ G +DK ++L + +
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I C D A E + ++Y +I + F ++EE+ K G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNG 883
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT----YTALIGVYFSAGSADK 446
+ + L +LI A R A ++ + A YT+LI + A
Sbjct: 884 SAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGH 943
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A +++ M R G+ P LGTF LL GL ++ R +A
Sbjct: 944 AFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 979
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D TY+ ++ A R+ + ++F+ M+ G+ D TYT ++ S AG + A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N +EM C PT+V+YT + +V A ++++ MI +G PN TYT L++
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPD 205
++G E+A +I+++M+ PD
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPD 628
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 107/266 (40%), Gaps = 53/266 (19%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A+ F + + G D +TYT ++D F +A I + M G VTYT
Sbjct: 505 VENAFFLFKEM-KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA------------------------ 141
+++H A V A ++E M K C+P +++YTA
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623
Query: 142 --------YMKI-------------------LFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
Y KI L +VK+A D+ + M G PN Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L++ +A K +EA E+F KM E G P+ + LI++ K ++ +L M E
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743
Query: 235 NRLALRYPVFKEALQTF-KVADENDS 259
N A ++ E + KVA +++
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEA 769
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 110/513 (21%), Positives = 199/513 (38%), Gaps = 87/513 (16%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FF W R G++H Y +LD+F +R S + E ++E + D +++ L
Sbjct: 157 FFLWAGRQIGYDHTPAVYIALLDVF---ERGSYDRVPEEFLREIRGD-DKEVLGKLLNVL 212
Query: 112 SNAGDVDGAVNI-WEEM-KLKEC--YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+G N+ EE+ +LK+ PT ++Y A +++ D++ A V++EM + GL
Sbjct: 213 IRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGL 272
Query: 168 P--------------------------------PNCYTYTVLMEYLVRAGKYEEALEIFS 195
PN Y ++ L A +EEA++ +
Sbjct: 273 SMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLN 332
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
+M+ P+ IL+ C + IL M Y +F + + +D
Sbjct: 333 RMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSD 392
Query: 256 END---SLLWQVHP-QFSPEFISDNDAVEFVTT--DIEGPLSIDQG--------LVLILL 301
+ LL ++ + P ++ N + + + ++ GP++ + +L
Sbjct: 393 DFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL 452
Query: 302 KKKNLVAIDSLLSG-------------IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
K N+V+ L G +M D++ S +I C+ R + A F
Sbjct: 453 NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ + + Y LI K + ++EM + G V LIH A
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572
Query: 409 RRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTM----------- 454
++ A ++F L+ + C TYTALI Y +G+ +KA +IY M
Sbjct: 573 KKVSVANELFELMIA-KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDM 631
Query: 455 ---CRKGI--HPSLGTFNVLLAGLEKLGRVSDA 482
+ + P++ T+ L+ GL K +V DA
Sbjct: 632 YFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 108/494 (21%), Positives = 194/494 (39%), Gaps = 59/494 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
E+A F N + RS + TY +L K++ K + +M +G +
Sbjct: 324 FEEAMDFLNRM-RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV------KEATDVY 159
S++H + D A + ++M+ EC P V Y + + + + A Y
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAY 442
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
EM+ G N L GK+E+A ++ +M G PD + + +I C A
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNA 502
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN--D 277
+ + MK + + + F A ++ Q H + E + D
Sbjct: 503 SRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKA----GIIKQAH-NWLDEMVRDGCEP 557
Query: 278 AVEFVTTDIEGPL-----SIDQGLVLILLKK---KNLVAIDSLL-----SGIMDKSIQLD 324
V TT I L S+ L +++ K N++ +L+ SG ++K+ Q+
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIY 617
Query: 325 SAVI--STIIEVNCDHRRRD-----------GAL---LAFEYSVKMDLNLERTAYL---- 364
+ + + I +V+ + ++ GAL L + VK +L T ++
Sbjct: 618 ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCE 677
Query: 365 -------ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
ALI K + E+ +M + G++ VY + LI RL +R K+
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKV 737
Query: 418 FSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
S + E+ C YT +I D+A K+ M KG P++ T+ ++ G
Sbjct: 738 LSKMLENS-CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFG 796
Query: 475 KLGRVSDA-EIYRK 487
K G+V E++R+
Sbjct: 797 KAGKVDKCLELFRE 810
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TYT M+D FG+A ++ +F M KG + VTYT +++ G +D
Sbjct: 779 KGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDE 838
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDR-VKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EEMK + +P VS +Y K++ R + + +E+ + G P Y VL+
Sbjct: 839 AYALLEEMK-QTYWPKHVS--SYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLI 895
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQ 203
+ V+AG+ E ALE+ ++ A +
Sbjct: 896 DNFVKAGRLEVALELHKEVISASMS 920
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 185/453 (40%), Gaps = 31/453 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G D +L ++ R+ K VF ++ G++ D +TYT ++ S A
Sbjct: 511 KSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKF 570
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV I+ +M C P ++ + + L+ R EA ++ ++ + L P TY L
Sbjct: 571 DEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTL 630
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L R GK +E + + +M + P+ N +++ CK G + +L M
Sbjct: 631 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 690
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV-----EFVTTDI-EGPLS 291
+ + V +E + + + Q I D + FV + + L
Sbjct: 691 IPDLSSYNTVIYGL-VKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALH 749
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKS----------------IQLDSAVISTIIEVN 335
I + L K + + SL+ GI+ K+ I LD + +I+
Sbjct: 750 IIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHL 809
Query: 336 CDHRRRDGALLAFEYSVKM---DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C ++ AL A E K ++L+ +Y +LI L+ N + EM + G
Sbjct: 810 CKQKK---ALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCG 866
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKI 450
+ LL+ +G + R K+ + + TY +I + ++A+ +
Sbjct: 867 PDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDL 926
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y + +G P+ T+ LL GL K GR+ DAE
Sbjct: 927 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAE 959
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 3/208 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FTY +LD G++ RI M V E M KG VTY +++ L + ++ A
Sbjct: 864 GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 923
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++++ + + PT +Y + L R+++A +++ EM++ G NC Y +L+
Sbjct: 924 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 983
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
AG E+ +F M + G+ PD + I+I+ CKAG+ + R + E L
Sbjct: 984 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1043
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVH 265
+ Y + + L K +E SL ++
Sbjct: 1044 LITYNLLIDGLGKSKRLEEAVSLFNEMQ 1071
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 189/462 (40%), Gaps = 96/462 (20%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D T+T ++ + +A RIS K VF M++ D VTY +++ ++ G+
Sbjct: 337 NEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQ 396
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ IW MK +V+YTA + L RV EA +++ EM Q+G+ P Y+Y L+
Sbjct: 397 SVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLI 456
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY------- 231
++A ++ +ALE+F M G +P+ + I K+GE +I I RY
Sbjct: 457 SGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGE--SIKAIQRYELMKSKG 514
Query: 232 ---------------MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
K RL + VF E L+ V+ D++ + + + + +
Sbjct: 515 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHE-LKAMGVSP--DTITYTMMIKCCSKASKFD 571
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+AV+ IE N V D V++++I+
Sbjct: 572 EAVKIFYDMIE----------------NNCVP---------------DVLVVNSLIDTLY 600
Query: 337 DHRRRDGALLAFEYSVKMDLNLERT--AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
R D A F Y +K ++NLE T Y L+ L + +V ++EEM + +
Sbjct: 601 KAGRGDEAWQIF-YQLK-EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNY--- 655
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
P I TY ++ G+ + AL + +M
Sbjct: 656 ------------------PPNLI------------TYNTILDCLCKNGAVNDALDMLYSM 685
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQAD 495
KG P L ++N ++ GL K R ++A I+ + KK + D
Sbjct: 686 TTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 727
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 189/445 (42%), Gaps = 39/445 (8%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ + G + S +M+E GI ++A TY ++++L +G A+ +++ M
Sbjct: 206 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVM 265
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P++ +Y+ M V+ + +EM G+ PN Y+YT+ + L +A ++
Sbjct: 266 MVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRF 325
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+EA I ++M+ G +PD +LI+ C AG + MK++ +
Sbjct: 326 DEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITL 385
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDN--------DAVEFVTTDIEGPLSIDQGLVLI 299
L F E+ S++ ++ + +DN DA+ V E D+
Sbjct: 386 LDKFADNGESQSVM-EIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDE----- 439
Query: 300 LLKKKNLV----AIDSLLSGIMDKSIQLDSAVISTIIEVN------------CDHRRRDG 343
+K+K +V + +SL+SG + D+ + ++++ ++ + G
Sbjct: 440 -MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSG 498
Query: 344 ----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
A+ +E + + A A++ L K + E+ G S
Sbjct: 499 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 558
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCR 456
++I A + A KIF + E+ C +LI + AG D+A +I+ +
Sbjct: 559 MMIKCCSKASKFDEAVKIFYDMIENN-CVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKE 617
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSD 481
+ P+ GT+N LLAGL + G+V +
Sbjct: 618 MNLEPTDGTYNTLLAGLGREGKVKE 642
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 182/434 (41%), Gaps = 56/434 (12%)
Query: 55 WVSR---SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
W+ R + G + ++YT + + G+A+R + M+ +G D +T+T ++ L
Sbjct: 295 WLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVL 354
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+AG + A +++ +MK + P V+Y + N + +++ M G N
Sbjct: 355 CDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNV 414
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
YT +++ L + G+ EALE+F +M++ G+ P++ + N LI +
Sbjct: 415 VAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISG---------------F 459
Query: 232 MKENRLALRYPVFKEALQTFKVAD-ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+K +R F +AL+ FK D H F + ++++ + L
Sbjct: 460 LKADR-------FGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ---RYEL 509
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+G+V ++VA +++L G+ KS +L A +R F
Sbjct: 510 MKSKGIV------PDVVAGNAVLFGLA-KSGRLGMA------------KR------VFHE 544
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
M ++ + Y +I K + F + +I +M + V + LI L A R
Sbjct: 545 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGR 604
Query: 411 PVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A +IF L E + TY L+ G + + + + M P+L T+N
Sbjct: 605 GDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 664
Query: 469 LLAGLEKLGRVSDA 482
+L L K G V+DA
Sbjct: 665 ILDCLCKNGAVNDA 678
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 196/465 (42%), Gaps = 34/465 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G ++++Y +++ F +A R +F+ M G + T+ +++ +G+
Sbjct: 441 KQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGES 500
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A+ +E MK K P +V+ A + L + R+ A V+ E+ G+ P+ TYT++
Sbjct: 501 IKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMM 560
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ +A K++EA++IF M E PD N LI+ KAG I +KE L
Sbjct: 561 IKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNL 620
Query: 238 ALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFIS-------------DNDAVE 280
+ L KV + L H + P I+ NDA++
Sbjct: 621 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 680
Query: 281 FV----TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ T LS ++ L+K++ S+ M K + D A + TI+
Sbjct: 681 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQ-MKKVLIPDYATLCTILPSFV 739
Query: 337 DHRRRDGAL-LAFEYSVKMDLNLERTAYLALI-GILIKLNTFPKVAEIVEEMTKAGHSLG 394
AL + EY ++ +R++ +L+ GIL K T K E E + +G +L
Sbjct: 740 KIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGT-EKSIEFAEIIASSGITLD 798
Query: 395 VYLGALLIHRLGSARRPVPA---AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
+ LI L ++ + A K F K T +Y +LI D A ++
Sbjct: 799 DFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK-TGSYNSLICGLVDENLIDIAEGLF 857
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSD-----AEIYRKEKKS 491
M G P T+N+LL + K R+ + E++RK +S
Sbjct: 858 AEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYES 902
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 194/495 (39%), Gaps = 70/495 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G + D TYT M+ +A + +F M E D + S++ L AG
Sbjct: 546 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRG 605
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A I+ ++K PT +Y + L +VKE + +EM PPN TY +
Sbjct: 606 DEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTI 665
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--- 234
++ L + G +AL++ M G PD ++ N +I K I MK+
Sbjct: 666 LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI 725
Query: 235 ---NRLALRYPVF------KEALQTFK-----VADEND-----SLLWQVHPQFSPEFISD 275
L P F KEAL K + D SL+ + + E
Sbjct: 726 PDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTE---- 781
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLK-----KKNLVA------------------IDSL 312
++EF +++D + L+K KK L A +SL
Sbjct: 782 -KSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSL 840
Query: 313 LSGIMDKS-IQLDSAVISTIIEVNCDHRRRD--------GALLAFEYSVKMDLNLERTAY 363
+ G++D++ I + + + + E+ C G + E +K+ + R Y
Sbjct: 841 ICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGY 900
Query: 364 LA-------LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ +I L+K + ++ + G S L+ L A R A
Sbjct: 901 ESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAEN 960
Query: 417 IFSLLPE---DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+F+ + E CT Y L+ + AG+ +K +++ M +GI+P + ++ +++ L
Sbjct: 961 LFNEMLEYGCKANCT-IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTL 1019
Query: 474 EKLGRVSDAEIYRKE 488
K G+++D Y ++
Sbjct: 1020 CKAGQLNDGLTYFRQ 1034
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
L++N +S+ GF+ TY +LD +A RI + +F M E G + Y +++
Sbjct: 926 LYYNLMSQ--GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG 983
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
AG+ + +++++M + P I SYT + L ++ + ++++++ GL P+
Sbjct: 984 HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 1043
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
TY +L++ L ++ + EEA+ +F++MQ+ G+ P+ N LI KAG+
Sbjct: 1044 LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKA 1095
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 154/418 (36%), Gaps = 51/418 (12%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F + S G D F ++ + K+ + + + G+++ +Y S++ L
Sbjct: 786 FAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLV 845
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+ +D A ++ EMK C P +Y + + + R++E V +EM ++G
Sbjct: 846 DENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYV 905
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY ++ LV++ + E+A++++ + G P L++ KAG + M
Sbjct: 906 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 965
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
E ++ L ++A
Sbjct: 966 LEYGCKANCTIYNILLNGHRIAG------------------------------------- 988
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
N + L ++D+ I D + II+ C + + L F +
Sbjct: 989 ------------NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL 1036
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+M L + Y LI L K + + EM K G +Y LI LG A +
Sbjct: 1037 EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAA 1096
Query: 413 PAAKIF-SLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A K++ LL + K TY ALI Y +GS D A Y M G P+ T ++
Sbjct: 1097 EAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 107/221 (48%), Gaps = 8/221 (3%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N D +YT ++D +A +++ F + E G+ D +TY ++ L + ++
Sbjct: 1003 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1062
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV+++ EM+ K P + +Y + + L + EA +Y+E++ +G PN +TY L+
Sbjct: 1063 AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1122
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL-IEKCCKAGETRTIILILRYMKENRLA 238
+G + A + +M G P+ + C+I + K G++ + +I+ ++ +
Sbjct: 1123 GYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDSDSYEIIVTFINAEGML 1182
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
+K F ++ D+ VHPQ +F++ A+
Sbjct: 1183 AYSRAWK-----FCISSREDN--GCVHPQQFAKFMASCGAL 1216
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 180/454 (39%), Gaps = 60/454 (13%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
P E F + R R H + MLD+ + R+ M VF++MQ + + + T+
Sbjct: 149 PAEALERFRSAARRPR-VVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTF 207
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++ L G + A MK +
Sbjct: 208 AAIFGGLGVEGGLRSAPVALPVMK-----------------------------------E 232
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
G+ N YTY L+ +LV++G EALE++ M GV P ++L+ K + T
Sbjct: 233 AGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVET 292
Query: 225 IILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVE 280
++ +LR M+ + + Y + L + DE +L ++ + P+ I+ ++
Sbjct: 293 VLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQ 352
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+ G +S D V +KK + ++DK D+ +++E+ + +
Sbjct: 353 VLCD--AGRIS-DAKDVFWKMKKSDQKPDRVTYITLLDKFA--DNGESQSVMEI-WNAMK 406
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
DG N AY A+I L ++ + E+ +EM + G Y
Sbjct: 407 ADG------------YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNS 454
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTAL--IGVYFSAGSADKALKIYKTMCRKG 458
LI A R A ++F + YT + I Y +G + KA++ Y+ M KG
Sbjct: 455 LISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 514
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSI 492
I P + N +L GL K GR+ A+ E K++
Sbjct: 515 IVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAM 548
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 177/435 (40%), Gaps = 52/435 (11%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y M+ ++ ++ + +F MQE DA Y S++H S AG A+NI E+M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
PT +Y + K+A ++ K+M + G+ P+ T+ +++ L +Y
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
+A+ F M+ A V D NI+I K G+ I + M+E R V
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV---- 189
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
T+ + + QV +N F L + +G+ K N+VA
Sbjct: 190 -TYTSIMHSYCIYGQV----------ENCKAIF-------DLMVAEGV------KPNIVA 225
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNC-------------DHRRRDGALLAFEYSVKMD 355
+SLL + + ++ I +I+ N + R A E KM
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 356 LNL---ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
N + +Y ALI + ++ EM K G V + L+ G R+
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ-- 343
Query: 413 PAAKIFSLLPEDQK-----CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
+I ++L + T Y + I Y S G +KAL++Y +M + P T+N
Sbjct: 344 -ITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYN 402
Query: 468 VLLAGLEKLGRVSDA 482
+L++G KLG+ +++
Sbjct: 403 ILISGSSKLGKYTES 417
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/510 (20%), Positives = 220/510 (43%), Gaps = 55/510 (10%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+YS S +++K + D++T+N ++ K E LF + R D T
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT+++ + ++ + K +F+LM +G+ + V Y S++ ++ G A+ I+ +K
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P IVSYT+ + + + ++A +V+ +M + PN +Y L++ AG +
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL-----RYMKENRLA----- 238
EA+ + +M++ G+QPD + + L+ C + + I IL R + N +A
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGI 370
Query: 239 ---LRYPVFKEALQTFKVADEN----DSLLWQVHPQFSPEFISDNDAVEF--------VT 283
L + +++AL+ + E+ D++ + + S + +++ F V+
Sbjct: 371 KSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVS 430
Query: 284 TDIEGPLSIDQ---------GLVLILLKKKNLVAIDSLLSG----------IMDKSIQLD 324
+ EG LS + G +L L+ + G + I D
Sbjct: 431 STKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPD 490
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+ + S+++E + L E+ K + L + +Y +I + + +E++E
Sbjct: 491 AIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIE 550
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT----ATYTALIGVYFS 440
+ + S+ V +++ LG + K+F + C+ +TY ++
Sbjct: 551 YLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTS--CSTVGLSTYAVVLRNLLV 608
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTF-NVL 469
G K +++ + M G+HP+L F NVL
Sbjct: 609 VGKWRKYIEVLQWMEDSGVHPTLYMFQNVL 638
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 167/423 (39%), Gaps = 34/423 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ +L + S FE+M+ + D T ++H L G A
Sbjct: 111 GVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEA 170
Query: 121 VNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ ++ M+ + +C P +V+YT+ M + +V+ ++ M+ G+ PN Y L+
Sbjct: 171 IELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLL 230
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
G + EAL IF+ +++ G++PD + L+ ++ + + MK+N
Sbjct: 231 GAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCK 290
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y +A + + E LL ++ P+ +S ++T
Sbjct: 291 PNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVS-------IST---------- 333
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ + + + I+++L + I L++ ++ I+ + AL + +
Sbjct: 334 -LLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRES 392
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
++ + Y LI KL + + E+M + S + +L A +
Sbjct: 393 NVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVS------STKEGKLSEAESTFSS 446
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
K P+ TYT LI Y + G +A ++K M GI P + L+
Sbjct: 447 MKKSGCFPD----VLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFN 502
Query: 475 KLG 477
K G
Sbjct: 503 KGG 505
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/361 (18%), Positives = 140/361 (38%), Gaps = 18/361 (4%)
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y +++ +++V +A ++ EM + P+ Y L+ RAG++ A+ I M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
A + P + N +I C AG + + + + M EN + L K +
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+ SD + + + L+K L + + +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNII--------------IHCLVKIGQCGEAIELFNSMRE 179
Query: 319 KSIQLDSAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+ + V++ +I+ C + + + F+ V + AY +L+G
Sbjct: 180 RRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMH 239
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTAL 434
+ I + K G + L++ G + +P A ++F+ + ++ + +Y AL
Sbjct: 240 REALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNAL 299
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
I Y SAG +A+ + M + GI P + + + LLA + +++ E + +S
Sbjct: 300 IDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGI 359
Query: 495 D 495
D
Sbjct: 360 D 360
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 2/225 (0%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMK 86
I+ D+YT + ++ + W R S G D TY +++D++G R++
Sbjct: 174 IQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAV 233
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
++E ++ +D VTY ++ + + AGD + + +EM+ P V M L
Sbjct: 234 ELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTL 293
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+V +A V+ EM G+ P T ++L+E R G Y++A E++ ++ G + D
Sbjct: 294 SKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDV 353
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
A N L++ C + G IL+ MK + ++ A+ T+
Sbjct: 354 AVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTY 398
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +T++T+++ ++ FE M+ +GI D VTY SV+ G V+
Sbjct: 172 RGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNE 231
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV ++E++K V+Y A + + + +EM G PN LM
Sbjct: 232 AVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMG 291
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L +AGK +A ++F++M+ +GV P +IL+E + G
Sbjct: 292 TLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVG 332
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 47 EKAWLFFNWV-SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
EKA FF W+ +R + +R+TY ML I +++ + + E M +GI D T++
Sbjct: 123 EKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKLVEEMTGRGIQPDNYTFS 182
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ + A+ +E MK + P V+Y + + + RV EA ++Y+++
Sbjct: 183 TLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSV 242
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ TY + RAG Y+ +++ +M+++G P+ N L+ KAG+
Sbjct: 243 NWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQA 302
Query: 226 ILILRYMK 233
+ M+
Sbjct: 303 KKVFNEMR 310
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + + T++ +A +++ K VF M+ G++ VT + ++ + G
Sbjct: 275 RDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAY 334
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++E +K + + Y + MK RV++A D+ KEM + G P+ TY
Sbjct: 335 DQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTA 394
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
M G + A +F K+ +PD ++I C AGE I M E+
Sbjct: 395 MNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFDEMMES 452
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G + T + +++++ V+E ++ +G D Y S+M G V
Sbjct: 310 RTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRV 369
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A +I +EMK C P ++Y M V A ++ +++ P+ +TV+
Sbjct: 370 EQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVM 429
Query: 178 MEYLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILI 213
+ AG+ E+A +IF +M E+G PD+ +L+
Sbjct: 430 IRACKLAGEIEQASKIFDEMMESGCCSPDERVSGMLL 466
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ I D +++I++ R + A+ +E ++ L+ Y A+ + + +
Sbjct: 207 EGIVPDEVTYNSVIDMYGRVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQS 266
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIG 436
+ ++V+EM +G S + L+ L A + A K+F+ + T + L+
Sbjct: 267 IMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVE 326
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
+Y G+ D+A ++Y+T+ +G + +N L+ + GRV AE KE K
Sbjct: 327 MYTRVGAYDQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMK 380
>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 376
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ +G D F Y+ M++ + ++ V M + G +A Y ++++
Sbjct: 119 IAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D A+ ++ EM C PT+V+Y + L +R EA D+ KEM+++G P TY+
Sbjct: 179 KFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L + K E AL++++++ G++PD NILI C G+T+ +++ Y N
Sbjct: 239 LLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALML--YFDMN 296
Query: 236 R 236
R
Sbjct: 297 R 297
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 161/393 (40%), Gaps = 62/393 (15%)
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+GD+DGA +++EM + P V Y A + F R+K+ +++ E++ R N +
Sbjct: 3 SGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELW-ELMGREXSQNVVS 61
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ ++M L G ++A+ I+ M ++G D IL++ CK G
Sbjct: 62 FNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNG------------- 108
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
++L+ ++A+E +L DA + + I G
Sbjct: 109 ---------YINKSLRVLEIAEEKGGVL---------------DAFAY-SAMING----- 138
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L K+ L S+L+G++ ++ V +T+I + D A+ F
Sbjct: 139 ------LCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGS 192
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ + Y LI L K F + ++V+EM + G V +LL+ L +
Sbjct: 193 TNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEM 252
Query: 414 AAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A ++++ L P+ Q LI S G AL +Y M R P+L T N
Sbjct: 253 ALQLWNQVISNGLKPDVQ----MLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHN 308
Query: 468 VLLAGLEKLGRVSDA-EIY-RKEKKSIQADALS 498
L+ G K G + +A I+ R + +Q D +S
Sbjct: 309 TLMEGFYKDGDIRNALGIWARILRNGLQPDIVS 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V++ M E ++ DAV Y ++++ AG + + +WE M +E +V
Sbjct: 2 ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMG-REXSQNVV 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF N V +A +++ M Q G + TY +L++ + G ++L +
Sbjct: 61 SFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+E G D A + +I CK + + +L M +N V+ + F
Sbjct: 121 EEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGF 174
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + Y T+++ F + VF M + VTY ++++ L
Sbjct: 158 NGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAE 217
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ +EM K P +++Y+ MK L +V+ A ++ ++I GL P+ +L+
Sbjct: 218 AYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIH 277
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L GK + AL ++ M P+ N L+E K G+ R + I + N L
Sbjct: 278 GLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGL 335
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ + +R + + + M EKG +TY+ +M L V+ A+ +W ++
Sbjct: 201 TYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQV 260
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P + + L + + A +Y +M + PN T+ LME + G
Sbjct: 261 ISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDI 320
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
AL I++++ G+QPD + NI ++ C IL L+
Sbjct: 321 RNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQ 363
>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 989
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 200/499 (40%), Gaps = 106/499 (21%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T +++L F +++ +F M E G++ + V+Y ++++ L +G V A
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 410
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N+ +M ++ IV+ T M LF + KEA +V++ +++ L PNC TY+ L++
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470
Query: 181 LVRAGKYE-----------------------------------EALEIFSKMQEAGVQPD 205
+ GK E +A+++ +M + V P+
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 530
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA---DENDSLLW 262
ILI+ KAGE + MK RL +F L K DE SL+
Sbjct: 531 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLII 590
Query: 263 QVHPQ-FSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNL----VAIDSLLSG 315
++ + P+ ++ ++ F + LSI Q + K+KN+ VA ++L+ G
Sbjct: 591 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM-----KEKNIRFDVVAYNALIKG 645
Query: 316 IM-----------DKSIQL----DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
++ + I+L D +TII C + + AL +
Sbjct: 646 LLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNA 705
Query: 361 TAYLALIGILIKLNTFP-------------------KVAEIVEEMTKAGHSLG---VYLG 398
Y LIG L K P K+ +I E++ +G L V L
Sbjct: 706 VTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLD 765
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
++ +R + A + TY ALI Y + +KALK Y M G
Sbjct: 766 EMV-------KRGISADLV------------TYNALIRGYCTGSHVEKALKTYSQMFVDG 806
Query: 459 IHPSLGTFNVLLAGLEKLG 477
I P++ T+N LL GL G
Sbjct: 807 IAPNITTYNTLLGGLSNAG 825
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 175/450 (38%), Gaps = 93/450 (20%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SR + +L+ R+ + + M KGI+ D V Y S++ G+
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 617
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A++I +EMK K +V+Y A +K L + + V MI+ GL P+C TY +
Sbjct: 618 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTI 676
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ GK E+AL+I ++M+ G+ P+ NILI CK G T I
Sbjct: 677 INTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPI----------- 725
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
K ++ + +++ D +L Q+H + + GL
Sbjct: 726 -----THKFLVKAYSRSEKADKIL-QIHEKL-----------------------VASGLE 756
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L K+ V +D ++ + I D + +I C + AL + +
Sbjct: 757 L----KRQKVVLDEMVK----RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIA 808
Query: 358 LERTAYLALIGIL----IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
T Y L+G L + + ++V EM + G VP
Sbjct: 809 PNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERG--------------------LVP 848
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
A ATY L+ Y G+ K + ++ M KG P+L T+NVL++
Sbjct: 849 NA-------------ATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 895
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
K G++ +A + + D L+K +P
Sbjct: 896 AKSGKMIEA-------RELLNDLLTKGRIP 918
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 178/434 (41%), Gaps = 57/434 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++ + + + +++ M GI D VT +S+++ G + A ++ EM
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P VSY + LF + RV EA ++ +M+ RG+ + T T +M+ L + GK
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+EA E+F + + + P+ + L++ CK G+ L+L+ M++ + F
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502
Query: 248 LQTFK----VADENDSLLWQVHPQFSPEFI------------SDNDAVEFVTTDIEGPLS 291
+ + ++ D L V P I + D + +++
Sbjct: 503 INGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL 562
Query: 292 IDQGLVL-ILLKK-KNLVAIDSLLSGIMD---KSIQLDSAVISTIIEVNCDHRRRDGALL 346
+ ++ ILL K + +D S I+D K I D +++I+ + AL
Sbjct: 563 EESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTF-PKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+ + ++ + AY ALI L++L + P+ + M + G
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY--VCSRMIELG--------------- 665
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
L P+ TY +I Y G + AL I M GI P+ T
Sbjct: 666 --------------LAPD----CITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVT 707
Query: 466 FNVLLAGLEKLGRV 479
+N+L+ GL K G V
Sbjct: 708 YNILIGGLCKTGFV 721
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 31 WDSYTVNQVLKTHPPME----KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
+DS T N ++K + + W+ +N V G D T++D + EA +S
Sbjct: 195 FDSITCNILVKGYCRIGLVQYAEWVMYNLVDG--GVTKDVIGLNTLIDGYCEAVLMSQAT 252
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM------------------- 127
+ E + ID VTY +++ GD+ A +++ E+
Sbjct: 253 ELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN 312
Query: 128 KLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
++K PT+V+YT AY K + V+E+ +YK+MI G+ P+ T + ++ R
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFV----GVEESHSLYKKMIMNGIMPDVVTCSSILYGFCR 368
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK EA +F +M E G+ P+ + +I K+G
Sbjct: 369 HGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 172/425 (40%), Gaps = 17/425 (4%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ T+L F + +S +K ++ M G+ D + ++H L GD+D A+
Sbjct: 97 WNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNND 156
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ + V+Y + V + + EM++RGL + T +L++ R G +
Sbjct: 157 VVDI--DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ 214
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A + + + GV D N LI+ C+A ++ + + + + L
Sbjct: 215 YAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLL 274
Query: 249 QTF-KVAD--ENDSLLWQVHPQFSPE-FISDNDAV-EFVTTDIEGPLSIDQGLVLILLKK 303
+ F K D +SL ++ + E + +ND V + +++ L L+ K
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+ SL ++ I D S+I+ C H + A + F +M L+ +Y
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF----- 418
+I L K + + +M G S + ++ L + A ++F
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454
Query: 419 -SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+L P TY+AL+ Y G + A + + M ++ + P++ TF+ ++ G K G
Sbjct: 455 LNLAPN----CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKG 510
Query: 478 RVSDA 482
+S A
Sbjct: 511 MLSKA 515
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 143/361 (39%), Gaps = 38/361 (10%)
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ +++ +DR A+ + M GL P + L+ +G + ++S M
Sbjct: 62 FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
GV PD + N+L+ CK G+ + L L Y++ N V D ++
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGD---LDLALGYLRNN----------------DVVDIDN 162
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI----DSLLS 314
V F + + D ++ ++ L D IL+K + + + ++
Sbjct: 163 VTYNTVIWGFCQKGLVDQ-GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMY 221
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++D + D ++T+I+ C+ A E S + D+ ++ Y L L
Sbjct: 222 NLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTL------LK 275
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTAL 434
F K ++ + LG + RL + V +I +L P TYT L
Sbjct: 276 AFCKTGDLTRAESLFNEILGFWKDE---DRLKN-NDVVTQNEIKNLQPT----LVTYTTL 327
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
I Y +++ +YK M GI P + T + +L G + G++++A + +E +
Sbjct: 328 IAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGL 387
Query: 495 D 495
D
Sbjct: 388 D 388
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG---- 115
RG + D TY ++ + + + M GI + TY +++ LSNAG
Sbjct: 770 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEE 829
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++ + EM + P +Y + K+ ++ EMI +G P TY
Sbjct: 830 MMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYN 889
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
VL+ ++GK EA E+ + + G P+ +IL
Sbjct: 890 VLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 926
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 189/486 (38%), Gaps = 58/486 (11%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
S W +++LK I D T N VL EK+ + +S G+ TY T
Sbjct: 216 SVWSFLKEMLKR-KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS-GYAPTIVTYNT 273
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + + R + + + M+ KG++ D TY ++H L + + + +M+ +
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+P V+Y + +V A+ + EM+ GL PN T+ L++ + G ++EAL
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL 248
++F M+ G+ P + + +L++ CK E MK N + + Y + L
Sbjct: 394 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 453
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
DE LL + S + I D D V + L+ K
Sbjct: 454 CKNGFLDEAVVLL----NEMSKDGI-DPDIVTY------------SALINGFCKVGRFKT 496
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++ I + + + ST+I C A+ +E + + + L+
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
L K + E + MT G +LP T
Sbjct: 557 SLCKAGKVAEAEEFMRCMTSDG-----------------------------ILPN----T 583
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
++ LI Y ++G KA ++ M + G HP+ T+ LL GL K G + +AE + K
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 489 KKSIQA 494
++ A
Sbjct: 644 LHAVPA 649
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 172/452 (38%), Gaps = 59/452 (13%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ ++G +Y +LD + + + M+ G+ + +TYT ++ L
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G +D AV + EM P IV+Y+A + R K A ++ + + GL PN Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ L+ R G +EA+ I+ M G D N+L+ CKAG+ +R M
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576
Query: 235 NRLALRYPVFK----------EALQTFKVADENDSLLWQVHPQFSP---------EFISD 275
+ + F E L+ F V DE + HP F +
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV--GHHPTFFTYGSLLKGLCKGGHL 634
Query: 276 NDAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+A +F+ + P ++D L+ + K NL SL ++ +SI DS +++
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Query: 332 IEVNCDHRRRDGALL-AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
I C + A+L A E + ++ + Y + + K + E+M G
Sbjct: 695 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKI 450
H+ P+ T A+I Y G +K +
Sbjct: 755 HT-----------------------------PD----IVTTNAMIDGYSRMGKIEKTNDL 781
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M + P+L T+N+LL G K VS +
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 29 IKWDSYTVNQVL-KTHPPMEKAWLF-FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
++ D YT N ++ K E W F V S G + D+ T M+ + R +
Sbjct: 860 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 919
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
V M ++GI+ ++ Y +++ L GD+ A + EEM + P V+ +A ++ L
Sbjct: 920 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 979
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ EAT + + M++ L P ++T LM + G EALE+ M G++ D
Sbjct: 980 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 1039
Query: 207 AACNILIEKCCKAGE 221
+ N+LI C G+
Sbjct: 1040 VSYNVLITGLCAKGD 1054
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
++ YT +D +A + + Y E M G D VT +++ S G ++ ++
Sbjct: 723 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 782
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P + +Y + V + +Y+ +I G+ P+ T L+ + +
Sbjct: 783 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 842
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
E L+I GV+ D+ N+LI KCC GE
Sbjct: 843 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 20 AQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTM 72
A+ LK+L P D+ N +L K+ + LF V RS D +TYT++
Sbjct: 637 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS--ILPDSYTYTSL 694
Query: 73 LD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+ + + K + ++ + E + + V YT + + AG + E+M
Sbjct: 695 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P IV+ A + ++++ D+ EM + PN TY +L+ + +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKA 219
++ + G+ PDK C+ L+ C++
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICES 842
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 69/167 (41%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA ++F + G D T M+D + +I + M + + TY +
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+H S DV + ++ + L P ++ + + + ++ ++ + K I RG+
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ YT+ +L+ G+ A ++ M G+ DK C+ ++
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 173/427 (40%), Gaps = 58/427 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D T+++ F + +V E++++ G D +TY ++ +G++D
Sbjct: 143 RGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDN 202
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + + M + P +V+Y ++ L + ++K+A +V +Q+ P+ TYT+L+E
Sbjct: 203 ALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIE 259
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK----EN 235
+ +A+++ +M+ G +PD N+LI CK G I L M +
Sbjct: 260 ATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP 319
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + + T + D L + SP ++ N + F+ QG
Sbjct: 320 NVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR---------QG 370
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ AID +L + +S + ++ C ++ D A+ + V
Sbjct: 371 LL--------GRAID-ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 421
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y L+ L K EI+ +++ G S PV
Sbjct: 422 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS------------------PV--- 460
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
TY +I G ++A+K+ M RKG+ P + T++ L++GL +
Sbjct: 461 ------------LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 508
Query: 476 LGRVSDA 482
G+V +A
Sbjct: 509 EGKVDEA 515
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ ++M +G D VTY +++ L G VD A
Sbjct: 386 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 445
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V I ++ K C P +++Y + L + + A + EM ++GL P+ TY+ L+
Sbjct: 446 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 505
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L R GK +EA++ F ++ G++P+ N ++ CK+ +T I L YM R
Sbjct: 506 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR 561
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYT 70
K D+A +L + + D T N +L+T K + R + D TYT
Sbjct: 196 KSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYT 255
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+++ + + + + M+ KG D VTY +++ + G +D A+ M
Sbjct: 256 ILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 315
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P ++++ ++ + R +A + +M+++G P+ T+ +L+ +L R G A
Sbjct: 316 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 375
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCK 218
++I KM G P+ + N L+ CK
Sbjct: 376 IDILEKMPMHGCTPNSLSYNPLLHGFCK 403
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 20 AQDLLKNLPIKW---DSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A D+L+ +P+ +S + N +L M++A + + + SRG D TY T+L
Sbjct: 375 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD-IMVSRGCYPDIVTYNTLL 433
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ ++ + + KG + +TY +V+ LS G + A+ + +EM+ K
Sbjct: 434 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 493
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P I++Y++ + L +V EA + ++ G+ PN TY +M L ++ + + A++
Sbjct: 494 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 553
Query: 194 FSKMQEAGVQPDKAACNILIE 214
+ M +P +A ILIE
Sbjct: 554 LAYMISKRCKPTEATYTILIE 574
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 4/219 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D ++N K D T N ++ +++A F N + S G + T+ +L
Sbjct: 275 DEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP-SYGCQPNVITHNIILRSMCS 333
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
R + + M KG + VT+ ++++L G + A++I E+M + C P +S
Sbjct: 334 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 393
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y + ++ A + M+ RG P+ TY L+ L + GK + A+EI +++
Sbjct: 394 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 453
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
G P N +I+ K G+T I +L M+ L
Sbjct: 454 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 492
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY T++D + + + + M+ KG+ D +TY+S++ LS G VD
Sbjct: 454 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 513
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +++ P ++Y + M L + + A D MI + P TYT+L+
Sbjct: 514 EAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 573
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
E + G +EAL++ +++ G+ +A
Sbjct: 574 EGIAYEGLAKEALDLLNELCSRGLVKKSSA 603
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 146/367 (39%), Gaps = 32/367 (8%)
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+++ L N +++ + M+ RG P+ T L+ R GK ++A + ++++G
Sbjct: 120 HLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSG 179
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY-PVFKEALQTFKVADENDSL 260
PD N+LI CK+GE + +L M + Y + + + K+ + L
Sbjct: 180 AVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 239
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI-----LLKKKNLVAIDSLLSG 315
Q+ + P+ I+ +E + + Q + L+ K ++V + L++G
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKES----GVGQAMKLLDEMRNKGSKPDVVTYNVLING 295
Query: 316 IMDKSIQLDSAVI-----------------STIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
I K +LD A+ + I+ C R A ++ +
Sbjct: 296 IC-KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 354
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ LI L + + +I+E+M G + L+H ++ A +
Sbjct: 355 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 414
Query: 419 SLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++ + C TY L+ G D A++I + KG P L T+N ++ GL K
Sbjct: 415 DIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 473
Query: 476 LGRVSDA 482
+G+ A
Sbjct: 474 VGKTERA 480
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D TY++++ ++ F ++ GI +A+TY S+M L +
Sbjct: 488 RRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 547
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
D A++ M K C PT +YT ++ + KEA D+ E+ RGL
Sbjct: 548 DRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 18 DSAQDLLKNLPIKW--DSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTML 73
++A LLK L ++ D+ T N + + +++ + + RG TY TML
Sbjct: 191 ETAHSLLKTLTSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTML 250
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ + +I + M+++ ID VTYT+V+H AGDV A ++ EM +
Sbjct: 251 KGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVV 310
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL-PPNCYTYTVLMEYLVRAGKYEEALE 192
P + +Y A +++L D V+ A V++EM + G+ PN TY V++ L G E AL
Sbjct: 311 PNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALG 370
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+M E G++ N++I C AGE
Sbjct: 371 FMERMGEHGLRACVQTYNVVIRYFCDAGE 399
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D TY + + + KR V + M ++GI VTY +++ + + A
Sbjct: 204 FRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAW 263
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EMK ++C +V+YT + + VK+A V+ EM++ G+ PN TY L++ L
Sbjct: 264 EFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVL 323
Query: 182 VRAGKYEEALEIFSKMQEAGV-QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ E A+ +F +M GV P+ N++I C G+ + + M E+ L
Sbjct: 324 CKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGL--- 380
Query: 241 YPVFKEALQTFKV 253
+ +QT+ V
Sbjct: 381 ----RACVQTYNV 389
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D ++ T+LDI ++KR+ + + + + + D VTY + + A
Sbjct: 169 GIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCLIKRTPMA 227
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +EM + PT+V+Y +K F ++++KEA + Y EM +R + TYT ++
Sbjct: 228 LRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHG 287
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
AG ++A +F +M + GV P+ A N LI+ CK +++ M
Sbjct: 288 FGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEM 339
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
QVL +E A + F ++R + TY ++ + E M E G+
Sbjct: 321 QVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGL 380
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE--- 154
TY V+ + +AG+V+ A+ ++ +M C P + +Y + +F+ + ++
Sbjct: 381 RACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVV 440
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
A + +M+ RG P +T+ ++ LV G + A EI G
Sbjct: 441 AGKLLMDMVDRGFLPRKFTFNRVLNGLVITGNQDFAKEILRMQSRCG 487
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 124/324 (38%), Gaps = 46/324 (14%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L P+ T +L E GK A+ F M E G++ D + N L++ CK+ T
Sbjct: 135 LGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAH 194
Query: 227 LILRYMKE---------NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
+L+ + N LA Y + K +V E V P ++ N
Sbjct: 195 SLLKTLTSRFRPDTVTYNILANGYCLIKRTPMALRVLKE------MVQRGIEPTMVTYNT 248
Query: 278 AVE--FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE-- 333
++ F + I+ + L KK + ++D +T+I
Sbjct: 249 MLKGYFRSNQIK------EAWEFYLEMKK--------------RKCEIDVVTYTTVIHGF 288
Query: 334 -VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
V D ++ A F VK + Y ALI +L K ++ + EEM + G
Sbjct: 289 GVAGDVKK---AKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVC 345
Query: 393 L-GVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
+ V ++I L A + E + C TY +I + AG +KAL+
Sbjct: 346 VPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALE 405
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGL 473
++ M P+L T+NVL++ +
Sbjct: 406 VFGKMGDGSCLPNLDTYNVLISAM 429
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 4/190 (2%)
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ IL K K + SLL + + + D+ + + C +R AL + V+
Sbjct: 180 LLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRG 238
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y ++ + N + E EM K + V +IH G A A
Sbjct: 239 IEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAK 298
Query: 416 KIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIH-PSLGTFNVLLAG 472
++F + ++ ATY ALI V S + A+ +++ M R+G+ P++ T+NV++ G
Sbjct: 299 RVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRG 358
Query: 473 LEKLGRVSDA 482
L +G + A
Sbjct: 359 LCHVGDMERA 368
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 418 FSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
F L + +KC TYT +I + AG KA +++ M ++G+ P++ T+N L+ L
Sbjct: 265 FYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLC 324
Query: 475 KLGRVSDAEIYRKE 488
K V +A + +E
Sbjct: 325 KKDSVENAVVVFEE 338
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 173/427 (40%), Gaps = 58/427 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D T+++ F + +V E++++ G D +TY ++ +G++D
Sbjct: 86 RGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDN 145
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + + M + P +V+Y ++ L + ++K+A +V +Q+ P+ TYT+L+E
Sbjct: 146 ALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIE 202
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK----EN 235
+ +A+++ +M+ G +PD N+LI CK G I L M +
Sbjct: 203 ATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP 262
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + + T + D L + SP ++ N + F+ QG
Sbjct: 263 NVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR---------QG 313
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ AID +L + +S + ++ C ++ D A+ + V
Sbjct: 314 LL--------GRAID-ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 364
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ Y L+ L K EI+ +++ G S PV
Sbjct: 365 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS------------------PV--- 403
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
TY +I G ++A+K+ M RKG+ P + T++ L++GL +
Sbjct: 404 ------------LITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 451
Query: 476 LGRVSDA 482
G+V +A
Sbjct: 452 EGKVDEA 458
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ ++M +G D VTY +++ L G VD A
Sbjct: 329 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 388
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V I ++ K C P +++Y + L + + A + EM ++GL P+ TY+ L+
Sbjct: 389 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 448
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L R GK +EA++ F ++ G++P+ N ++ CK+ +T I L YM R
Sbjct: 449 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR 504
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYT 70
K D+A +L + + D T N +L+T K + R + D TYT
Sbjct: 139 KSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYT 198
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+++ + + + + M+ KG D VTY +++ + G +D A+ M
Sbjct: 199 ILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 258
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P ++++ ++ + R +A + +M+++G P+ T+ +L+ +L R G A
Sbjct: 259 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 318
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCK 218
++I KM G P+ + N L+ CK
Sbjct: 319 IDILEKMPMHGCTPNSLSYNPLLHGFCK 346
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 20 AQDLLKNLPIKW---DSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A D+L+ +P+ +S + N +L M++A + + + SRG D TY T+L
Sbjct: 318 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD-IMVSRGCYPDIVTYNTLL 376
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ ++ + + KG + +TY +V+ LS G + A+ + +EM+ K
Sbjct: 377 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 436
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P I++Y++ + L +V EA + ++ G+ PN TY +M L ++ + + A++
Sbjct: 437 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 496
Query: 194 FSKMQEAGVQPDKAACNILIE 214
+ M +P +A ILIE
Sbjct: 497 LAYMISKRCKPTEATYTILIE 517
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 4/219 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D ++N K D T N ++ +++A F N + S G + T+ +L
Sbjct: 218 DEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP-SYGCQPNVITHNIILRSMCS 276
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
R + + M KG + VT+ ++++L G + A++I E+M + C P +S
Sbjct: 277 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 336
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y + ++ A + M+ RG P+ TY L+ L + GK + A+EI +++
Sbjct: 337 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 396
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
G P N +I+ K G+T I +L M+ L
Sbjct: 397 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 435
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
N +S S+G + TY T++D + + + + M+ KG+ D +TY+S++ L
Sbjct: 391 ILNQLS-SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
S G VD A+ + +++ P ++Y + M L + + A D MI + P
Sbjct: 450 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 509
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
TYT+L+E + G +EAL++ +++ G+ +A
Sbjct: 510 ATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 546
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 146/367 (39%), Gaps = 32/367 (8%)
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+++ L N +++ + M+ RG P+ T L+ R GK ++A + ++++G
Sbjct: 63 HLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSG 122
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY-PVFKEALQTFKVADENDSL 260
PD N+LI CK+GE + +L M + Y + + + K+ + L
Sbjct: 123 AVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 182
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI-----LLKKKNLVAIDSLLSG 315
Q+ + P+ I+ +E + + Q + L+ K ++V + L++G
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKES----GVGQAMKLLDEMRNKGSKPDVVTYNVLING 238
Query: 316 IMDKSIQLDSAVI-----------------STIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
I K +LD A+ + I+ C R A ++ +
Sbjct: 239 IC-KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 297
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ LI L + + +I+E+M G + L+H ++ A +
Sbjct: 298 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 357
Query: 419 SLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++ + C TY L+ G D A++I + KG P L T+N ++ GL K
Sbjct: 358 DIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 416
Query: 476 LGRVSDA 482
+G+ A
Sbjct: 417 VGKTERA 423
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 177/435 (40%), Gaps = 52/435 (11%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y M+ ++ ++ + +F MQE DA Y S++H S AG A+NI E+M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
PT +Y + K+A ++ K+M + G+ P+ T+ +++ L +Y
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
+A+ F M+ A V D NI+I K G+ I + M+E R V
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV---- 189
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
T+ + + QV +N F L + +G+ K N+VA
Sbjct: 190 -TYTSIMHSYCIYGQV----------ENCKAIF-------DLMVAEGV------KPNIVA 225
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNC-------------DHRRRDGALLAFEYSVKMD 355
+SLL + + ++ I +I+ N + R A E KM
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 356 LNL---ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
N + +Y ALI + ++ EM K G V + L+ G R+
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ-- 343
Query: 413 PAAKIFSLLPEDQK-----CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
+I ++L + T Y + I Y S G +KAL++Y +M + P T+N
Sbjct: 344 -ITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYN 402
Query: 468 VLLAGLEKLGRVSDA 482
+L++G KLG+ +++
Sbjct: 403 ILISGSSKLGKYTES 417
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 118/243 (48%), Gaps = 4/243 (1%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+YS S +++K + D++T+N ++ K E LF + R D T
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT+++ + ++ + K +F+LM +G+ + V Y S++ ++ G A+ I+ +K
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P IVSYT+ + + + ++A +V+ +M + PN +Y L++ AG +
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA+ + +M++ G+QPD + + L+ C + + I IL + + L + +
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGI 370
Query: 249 QTF 251
+++
Sbjct: 371 KSY 373
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A FN + ++ G D +YT++L+ +G + + + VF M++ + V+Y ++
Sbjct: 241 EALAIFNLIKKN-GLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNAL 299
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ +AG + AV + EM+ P +VS + + ++ + + RG+
Sbjct: 300 IDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGI 359
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
N Y ++ + G YE+ALE+++ M+E+ V+PD NILI K G+
Sbjct: 360 DLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGK 413
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ +L + S FE+M+ + D T ++H L G A
Sbjct: 111 GVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEA 170
Query: 121 VNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ ++ M+ + +C P +V+YT+ M + +V+ ++ M+ G+ PN Y L+
Sbjct: 171 IELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLL 230
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
G + EAL IF+ +++ G++PD + L+ ++ + + MK+N
Sbjct: 231 GAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKN 287
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/361 (18%), Positives = 139/361 (38%), Gaps = 18/361 (4%)
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y +++ +++V +A ++ EM + P+ Y L+ RAG++ A+ I M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
A + P + N +I C AG + + + + M EN + L K +
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+ SD + + + L+K L + + +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNII--------------IHCLVKIGQCGEAIELFNSMRE 179
Query: 319 KSIQL--DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+ + D ++I+ C + + + F+ V + AY +L+G
Sbjct: 180 RRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMH 239
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTAL 434
+ I + K G + L++ G + +P A ++F+ + ++ + +Y AL
Sbjct: 240 REALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNAL 299
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
I Y SAG +A+ + M + GI P + + + LLA + +++ E + +S
Sbjct: 300 IDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGI 359
Query: 495 D 495
D
Sbjct: 360 D 360
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
R TY +++ G A + + M E G+ D VT+ V+ L N A++ +E
Sbjct: 81 RTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFE 140
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR--GLPPNCYTYTVLMEYLVR 183
MK + + L + EA +++ M +R PP+ TYT +M
Sbjct: 141 IMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCI 200
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
G+ E IF M GV+P+ A N L+ G R + I +K+N L
Sbjct: 201 YGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGL 254
>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 373
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ +G D F Y+ M++ + ++ V M + G +A Y ++++
Sbjct: 119 IAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D A+ ++ EM C PT+V+Y + L +R EA D+ KEM+++G P TY+
Sbjct: 179 KFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L + K E AL++++++ G++PD NILI C G+T+ +++ Y N
Sbjct: 239 LLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALML--YFDMN 296
Query: 236 R 236
R
Sbjct: 297 R 297
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V++ M E ++ DAV Y ++++ AG + + +WE M +E +V
Sbjct: 2 ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMG-REDSQNVV 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF N V +A +++ M Q G + TY +L++ + G ++L +
Sbjct: 61 SFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+E G D A + +I CK + + +L M +N V+ + F
Sbjct: 121 EEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGF 174
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ + +R + + + M EKG +TY+ +M L V+ A+ +W ++
Sbjct: 201 TYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQV 260
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P + + L + + A +Y +M + PN T+ LME + G
Sbjct: 261 ISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDI 320
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
AL I++++ G+QPD + NI ++ C IL L+
Sbjct: 321 RNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQ 363
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + Y T+++ F + VF M + VTY ++++ L
Sbjct: 158 NGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAE 217
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ +EM K P +++Y+ MK L +V+ A ++ ++I GL P+ +L+
Sbjct: 218 AYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIH 277
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L GK + AL ++ M P+ N L+E K G+ R + I + N L
Sbjct: 278 GLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGL 335
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 117/301 (38%), Gaps = 25/301 (8%)
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM--KENRLALRY 241
+G + A ++ +M E+ V PD N ++ +AG + I + M ++++ + +
Sbjct: 3 SGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDSQNVVSF 62
Query: 242 PVFKEALQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ L F D + ++ +W++ Q F+ D S G+++
Sbjct: 63 NIMMRGL--FGNGDVDKAISIWELMTQ--SGFVED---------------STTYGILVDG 103
Query: 301 LKKKNLVAIDSLLSGIMD-KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K + + GI + K LD+ S +I C + D A+ +K
Sbjct: 104 FCKNGYINKSLRVLGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPN 163
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI + ++ F + EM S V LI+ L R A +
Sbjct: 164 AHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVK 223
Query: 420 LLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E + C TY+ L+ + AL+++ + G+ P + N+L+ GL +G
Sbjct: 224 EMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVG 283
Query: 478 R 478
+
Sbjct: 284 K 284
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 1/182 (0%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+ + K ++ A+ F + + RG + D +TY T+++ + + K +F+ M K
Sbjct: 162 IKALCKNSGTIDAAFEIFREMPK-RGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTK 220
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G + VTY+ +MH L AG+VD A+ ++++MK K P + +Y++ M L N EA
Sbjct: 221 GCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEA 280
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
++ + M+++ PN TY+ L+ L + GK EA+E +M+ G++PD +I
Sbjct: 281 MELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIING 340
Query: 216 CC 217
C
Sbjct: 341 FC 342
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 15/253 (5%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F M ++G + D+ TY ++++ L G A +++EM K C P++V+Y+ M L
Sbjct: 178 IFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLC 237
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
V EA ++ +M ++ + PN +TY+ LM+ L + G EA+E+ M +P+
Sbjct: 238 QAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMV 297
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQ 263
+ LI CK G+ + L MK L ++ + + F K + L
Sbjct: 298 TYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEM 357
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
V Q SP ++ + V+ ++G L NL L G+ + I +
Sbjct: 358 VLGQISPNRVTWSLHVKLNNMVVQG-----------LCTNGNLNRSFQLYIGMRTRGISI 406
Query: 324 DSAVISTIIEVNC 336
D+ ++++ C
Sbjct: 407 DAGTFDSLVKCFC 419
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS-NAGDVDGAVNIWEE 126
+Y ++ I E ++ ++ M+E G+ V+ ++ L N+G +D A I+ E
Sbjct: 122 SYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFRE 181
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + C P +Y + L + EA +++KEM +G P+ TY+ LM L +AG
Sbjct: 182 MPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGN 241
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
+EA+ +F KM++ ++P+ + L++ CK G + + +L M R
Sbjct: 242 VDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKR 291
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 188/476 (39%), Gaps = 42/476 (8%)
Query: 29 IKWDSY----TVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRI 82
+KW V Q+L+ + KA + F+ S S GF HD T+ M+ A
Sbjct: 7 LKWSKQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEF 66
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+ + M+E+ I + S+ A+ ++ +M C PT SY +
Sbjct: 67 RPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISV 126
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR-AGKYEEALEIFSKMQEAG 201
IL +++K A YK M + G+ + + VL++ L + +G + A EIF +M + G
Sbjct: 127 FAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRG 186
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADEND 258
PD LI CK G+T + + M + + Y L DE
Sbjct: 187 CDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAM 246
Query: 259 SLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK--KKNLVAIDSLLSG 315
L ++ + P + + ++ + + G L + L +++ K K N+V +L++G
Sbjct: 247 GLFDKMKKKAIEPNVFTYSSLMDGLCKN-GGSLEAMELLEMMVRKRHKPNMVTYSTLING 305
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ K +L AV T+ + + D L Y +I +
Sbjct: 306 LC-KEGKLAEAV-ETLDRMKLQGLKPDAGL-----------------YGKIINGFCNIRK 346
Query: 376 FPKVAEIVEEM-------TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC- 427
F + A ++EM + SL V L +++ L + + +++ +
Sbjct: 347 FQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISI 406
Query: 428 -TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
T+ +L+ + G KA +I+ M G P G ++ ++ G +V +A
Sbjct: 407 DAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREA 462
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 16/251 (6%)
Query: 15 STWDSAQDLLKNLPIKW---DSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRF 67
T D+A ++ + +P + DSYT +N + K E LF ++G +
Sbjct: 170 GTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEM--DTKGCSPSVV 227
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ ++ +A + +F+ M++K I + TY+S+M L G A+ + E M
Sbjct: 228 TYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMM 287
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P +V+Y+ + L ++ EA + M +GL P+ Y ++ K+
Sbjct: 288 VRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKF 347
Query: 188 EEALEIFSKMQEAGVQPDKAA-------CNILIEKCCKAGETRTIILILRYMKENRLALR 240
+EA +M + P++ N++++ C G + M+ +++
Sbjct: 348 QEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISID 407
Query: 241 YPVFKEALQTF 251
F ++ F
Sbjct: 408 AGTFDSLVKCF 418
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 148/347 (42%), Gaps = 21/347 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D YTT+L F + S + F+ MQ KG+ D VTYT++++ L A +++ A +
Sbjct: 360 DEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLL 419
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM + V+YT + ++ EA ++ M+QRG+ PN TYT L + L +
Sbjct: 420 QEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQ 479
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
G + A E+ +M G++ + N LI CKAG + + M L Y
Sbjct: 480 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTY 539
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDN---------DAVE--------FVT 283
+AL D SLL ++ + P ++ N VE +
Sbjct: 540 TTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLE 599
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+I + L+ + N+ + + G+ + + + + +I+ +C R
Sbjct: 600 KNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKE 659
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
AL + ++ L T+Y ALI +L K F + E+ +M K G
Sbjct: 660 ALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEG 706
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 179/443 (40%), Gaps = 29/443 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +L +A R+ + +F+ M D VTY ++H G+++ AV + +EM
Sbjct: 261 SYNILLKALCDAGRVKDARQLFDEMASAP---DVVTYGILIHGHCALGELENAVKLLDEM 317
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P YT+ + +L + +A V ++M+QR + + YT ++ G
Sbjct: 318 VAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDL 377
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
A F +MQ G+ D +I C+A E +L+ M RL + Y V
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVL 437
Query: 245 KEA-LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + K+A+ +Q+H ++ N TD L K+
Sbjct: 438 IDGYCKRGKMAEA-----FQMHNAMVQRGVTPNVVTYTALTD-------------GLCKQ 479
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
++ A + LL + +K ++L++ +++I C + A+ L + Y
Sbjct: 480 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTY 539
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI L K + +++EM G + +L++ + R K+ + E
Sbjct: 540 TTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLE 599
Query: 424 D--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
ATY +L+ Y + +IYK M + + P+ T+N+L+ G K + +
Sbjct: 600 KNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKE 659
Query: 482 AEIYRKE--KKSIQADALSKDAV 502
A + E +K + A S A+
Sbjct: 660 ALYFHDEMIQKGFRLTATSYSAL 682
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 174/431 (40%), Gaps = 40/431 (9%)
Query: 54 NWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSN 113
+++S + F+ D ++ +L A + +++ GI+ +V+ L
Sbjct: 192 HYISTYKTFSSDPASFDFLLLCLPSAP-------LLRRLRQYGISPSPEACNAVLSRLP- 243
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+D A+ +++E+ K + SY +K L RVK+A ++ EM P+ T
Sbjct: 244 ---LDEAIELFQELPHK----NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVT 293
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
Y +L+ G+ E A+++ +M GV+P+ ++ C G + ++ M
Sbjct: 294 YGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMV 353
Query: 234 ENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ ++ L ++ L F D + W + + ++ D V + TT I G
Sbjct: 354 QRKVILDEALYTTVLSGFCNKGDLVSARRW--FDEMQRKGLA-TDGVTY-TTMING---- 405
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L + L + LL + + + +D + +I+ C + A V
Sbjct: 406 -------LCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ + Y AL L K E++ EM+ G L LI+ L A
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518
Query: 413 PAAKIFSLLPEDQKC----TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A + + + D C TYT LI +G D+A + + M KGI P++ T+NV
Sbjct: 519 QAMRTMADM--DTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNV 576
Query: 469 LLAGLEKLGRV 479
L+ G GRV
Sbjct: 577 LMNGFCMSGRV 587
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G + TY ++++ +A + M + D TYT+++ L +GD+D
Sbjct: 494 NKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLD 553
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ +EM K PTIV+Y M ++ RV+ + M+++ + PN TY LM
Sbjct: 554 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLM 613
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+ + EI+ M+ V P++ NILI+ CKA
Sbjct: 614 KQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKA 654
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +++ F + R+ K + + M EK I+ +A TY S+M ++ I++ M
Sbjct: 573 TYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGM 632
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ ++ P +Y +K +KEA + EMIQ+G +Y+ L+ L + K+
Sbjct: 633 RSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKF 692
Query: 188 EEALEIFSKMQEAGV 202
EA E+F M++ G+
Sbjct: 693 VEARELFHDMRKEGL 707
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 171/420 (40%), Gaps = 20/420 (4%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V E M KG +D V++ + G VD AV + ++ C IVSY A +K L
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ R + ++ EM++ PN T+ L+ YL R G +E E+ ++M E G PD
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+I+ CK G IL M L + L+ A+ W+ +
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER-----WKEAEE 342
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
E + ++ VT +I GLV +++ LL ++ D
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE---------LLEQMLSHGCMPDVIT 393
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T+I C D A++ + +Y ++ L + E++ +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSA 444
+ G LI+ L A ++ + + C+ +Y+ +I AG
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKAGKT 512
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK-KSIQADALSKDAV 502
++AL++ M KGI P+ ++ + L + GRV+ +++ K +I++DA+ +AV
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 132/326 (40%), Gaps = 49/326 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++D F + + + + E M G D +TYT+V++ G +D AV +
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M C P VSYT +K L R +A ++ +MIQ+G PPN T+ L+ +L +
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G E+A+E+ +M G PD + + +I+ KAG+T
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT---------------------- 512
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+EAL+ V V+ SP I I + L ++
Sbjct: 513 EEALELLNV---------MVNKGISPNTI------------------IYSSIACALSREG 545
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + + I D +I+ D+ + + +I C D A+ F Y V + Y
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAG 390
LI L + E++ E+ G
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSRG 631
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T++ + V M E G D Y +++ + G ++ A I M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P +V Y +K L +R KEA ++ EM Q+ P + T+ +L+++ + G
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ +E+ +M G PD +I CK G +++L+ M
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/428 (19%), Positives = 164/428 (38%), Gaps = 22/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +Y +L AKR ++ + + M + VT+ +++ +L G +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M C P I Y + + ++ A ++ M GL PN Y +++
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L A +++EA E+ S+M + D NIL++ C+ G +I +L M L
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM------LS 384
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG--PLSIDQGLVL 298
+ + + V + F E + D + + G P ++ +VL
Sbjct: 385 HGCMPDVITYTTVIN-----------GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 299 I-LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L V + L+S ++ + + +T+I C + A+ + + +
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ +Y +I L K + E++ M G S + + + L R ++
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + + + Y A+I D+A+ + M G P+ T+ +L+ GL
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 476 LGRVSDAE 483
G +A+
Sbjct: 614 EGLAKEAQ 621
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/408 (18%), Positives = 151/408 (37%), Gaps = 60/408 (14%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P ++ ++ L R+ +A +V EM +G P Y V++E R+G + ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK----ENRLALRYPVFKEALQ 249
M G D CN+++ C+ G + +LR + E + V K
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFV---------------------TTDI-- 286
+ D + + V +P ++ N + ++ T DI
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 287 ----------EGPLSIDQGLVLILLK---KKNLVAIDSLLSGI----------------M 317
EG L + ++ + K N+V +++L G+
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
K LD + +++ C + D + E + + Y +I K
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTAL 434
+ +++ M+ G +++ L SA R V A ++ S + + Q C T+ L
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ-QGCPPNPVTFNTL 467
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I G ++A+++ K M G P L +++ ++ GL K G+ +A
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 136/341 (39%), Gaps = 44/341 (12%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+PPN YT+ ++ L G+ +ALE+ +M G P ++++E C++G R +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 227 LILRYMKENRLAL---RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+L M L + A+ DE LL ++ F + D V +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL-----AFFGCEADIVSYN- 220
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA----VISTIIEVNCDHR 339
++ +GL + K ++ L MD+ +++D A +T+I C +
Sbjct: 221 -------AVLKGLCM----AKRWGDVEEL----MDEMVRVDCAPNIVTFNTLIGYLCRNG 265
Query: 340 --RRDGALLA--FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R +LA E+ D+ + Y +I + K EI+ M G V
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRM----YATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTALIGVYFSAGSADKALKI 450
++ L SA R A ++ S + P D T+ L+ + G D+ +++
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD---VTFNILVDFFCQNGLVDRVIEL 378
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ M G P + T+ ++ G K G + +A + K S
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 170/418 (40%), Gaps = 40/418 (9%)
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
G K + K + E+M G D TY+ V+ +L NA V+ A +++EMK P +
Sbjct: 466 GFGKFEKAYKVIHEMMG-NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+YT + +K+A + EM++ G P TYT L+ ++A K A E+F
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
M G P+ LI+ CK+G I M+
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR----------------------- 621
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG-LVLILLKKKNLVAIDSLLSG 315
D+ + V F I +N A E P + G LV L K + LL
Sbjct: 622 GDADIPDVDMYFK---IKNNVA--------EKPNVVTYGALVDGLCKAHKVKDARDLLET 670
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ + ++ V +I+ C + D A F V+ N Y +LI L K
Sbjct: 671 MFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKR 730
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYT 432
V +++ +M + + + + +I L + A K+ L+ E++ C TYT
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM-LMMEEKGCKPNVVTYT 789
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKK 490
A+I + AG DK L++++ M KG P+ T+ VL+ G + +A +E K
Sbjct: 790 AMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK 847
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 29/317 (9%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y ++D F +A ++ + VF M E+G N + TY+S++ L +D
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLV 734
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +M C P IV YT + L + EA + M ++G PN TYT +++
Sbjct: 735 LKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDG 794
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+AGK ++ LE+F +M G P+ +LI CC G +L MK+
Sbjct: 795 FGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKH 854
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + ++ +K EFI +E V + P IL
Sbjct: 855 VSSYCKVIEGYK-----------------REFILSLGLLEEVEKNGSAP--------TIL 889
Query: 301 LKKKNLVAIDSLL-SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L K V ID+ + +G ++ +++L VIS + + + +F Y+ K+D E
Sbjct: 890 LYK---VLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFE 946
Query: 360 RTAYLALIGILIKLNTF 376
+ G++ L TF
Sbjct: 947 LFYDMIRDGVIPDLGTF 963
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 188/456 (41%), Gaps = 78/456 (17%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++ + +AK++S +FELM KG + +TYT+++ +G+++ A I+ M
Sbjct: 561 TYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Query: 128 -------------KLKECY---PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
K+K P +V+Y A + L +VK+A D+ + M G PN
Sbjct: 621 RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNT 680
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
Y L++ +A K +EA E+F KM E G P+ + LI+ R
Sbjct: 681 IVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLID---------------RL 725
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
K+ RL L V + L+ +P + + ++ +
Sbjct: 726 FKDKRLDLVLKVLSKMLEN----------------SCAPNIVIYTEMID----GLSKVAK 765
Query: 292 IDQGLVLILLK-----KKNLVAIDSLLSGI-----MDKSIQL-----------DSAVIST 330
D+ L+L+ K N+V +++ G +DK ++L + +
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+I C D A E + ++Y +I + F ++EE+ K G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNG 883
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTAT---YTALIGVYFSAGSADK 446
+ + L +LI A R A ++ ++ TA YT+LI + A D
Sbjct: 884 SAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDH 943
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A +++ M R G+ P LGTF LL GL ++ R +A
Sbjct: 944 AFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 979
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D TY+ ++ A R+ + ++F+ M+ G+ D TYT ++ S AG + A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N +EM C PT+V+YT + +V A ++++ MI +G PN TYT L++
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPD 205
++G E+A +I+++M+ PD
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPD 628
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG+N + +TY++++D + KR+ + V M E + V YT ++ LS D
Sbjct: 709 RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + M+ K C P +V+YTA + +V + ++++EM +G PN TYTVL+
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAA--CNI-------------LIEKCCKAGETRT 224
+ G +EA + +M++ P + C + L+E+ K G T
Sbjct: 829 HCCATGHLDEAYALLEEMKQT-YWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPT 887
Query: 225 I----ILILRYMKENRLALRYPVFKEALQ 249
I +LI ++K RL + + KE +
Sbjct: 888 ILLYKVLIDNFVKAGRLEVALELHKEVIS 916
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 107/266 (40%), Gaps = 53/266 (19%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A+ F + + G D +TYT ++D F +A I + M G VTYT
Sbjct: 505 VENAFFLFKEM-KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYT 563
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA------------------------ 141
+++H A V A ++E M K C+P +++YTA
Sbjct: 564 TLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGD 623
Query: 142 --------YMKI-------------------LFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
Y KI L +VK+A D+ + M G PN Y
Sbjct: 624 ADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L++ +A K +EA E+F KM E G P+ + LI++ K ++ +L M E
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743
Query: 235 NRLALRYPVFKEALQTF-KVADENDS 259
N A ++ E + KVA +++
Sbjct: 744 NSCAPNIVIYTEMIDGLSKVAKTDEA 769
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 110/513 (21%), Positives = 199/513 (38%), Gaps = 87/513 (16%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FF W R G++H Y +LD+F +R S + E ++E + D +++ L
Sbjct: 157 FFLWAGRQIGYDHTPAVYIALLDVF---ERGSYDRVPEEFLREIRGD-DKEVLGKLLNVL 212
Query: 112 SNAGDVDGAVNI-WEEM-KLKEC--YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+G N+ EE+ +LK+ PT ++Y A +++ D++ A V++EM + GL
Sbjct: 213 IRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGL 272
Query: 168 P--------------------------------PNCYTYTVLMEYLVRAGKYEEALEIFS 195
PN Y ++ L A +EEA++ +
Sbjct: 273 SMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLN 332
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
+M+ P+ IL+ C + IL M Y +F + + +D
Sbjct: 333 RMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSD 392
Query: 256 END---SLLWQVHP-QFSPEFISDNDAVEFVTT--DIEGPLSIDQG--------LVLILL 301
+ LL ++ + P ++ N + + + ++ GP++ + +L
Sbjct: 393 DFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL 452
Query: 302 KKKNLVAIDSLLSG-------------IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
K N+V+ L G +M D++ S +I C+ R + A F
Sbjct: 453 NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ + + Y LI K + ++EM + G V LIH A
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 572
Query: 409 RRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTM----------- 454
++ A ++F L+ + C TYTALI Y +G+ +KA +IY M
Sbjct: 573 KKVSVANELFELMIA-KGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDM 631
Query: 455 ---CRKGI--HPSLGTFNVLLAGLEKLGRVSDA 482
+ + P++ T+ L+ GL K +V DA
Sbjct: 632 YFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDA 664
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 108/494 (21%), Positives = 194/494 (39%), Gaps = 59/494 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
E+A F N + RS + TY +L K++ K + +M +G +
Sbjct: 324 FEEAMDFLNRM-RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV------KEATDVY 159
S++H + D A + ++M+ EC P V Y + + + + A Y
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAY 442
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
EM+ G N L GK+E+A ++ +M G PD + + +I C A
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNA 502
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN--D 277
+ + MK + + + F A ++ Q H + E + D
Sbjct: 503 SRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKA----GIIKQAH-NWLDEMVRDGCEP 557
Query: 278 AVEFVTTDIEGPL-----SIDQGLVLILLKK---KNLVAIDSLL-----SGIMDKSIQLD 324
V TT I L S+ L +++ K N++ +L+ SG ++K+ Q+
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIY 617
Query: 325 SAVI--STIIEVNCDHRRRD-----------GAL---LAFEYSVKMDLNLERTAYL---- 364
+ + + I +V+ + ++ GAL L + VK +L T ++
Sbjct: 618 ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCE 677
Query: 365 -------ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
ALI K + E+ +M + G++ VY + LI RL +R K+
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKV 737
Query: 418 FSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
S + E+ C YT +I D+A K+ M KG P++ T+ ++ G
Sbjct: 738 LSKMLENS-CAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFG 796
Query: 475 KLGRVSDA-EIYRK 487
K G+V E++R+
Sbjct: 797 KAGKVDKCLELFRE 810
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ +G D F Y+ M++ + ++ V M G + Y +++ L A
Sbjct: 119 IAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGAS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D AV I+ EM +C P I +Y+ + L +R EA D+ KEM+++GL P+ TY+
Sbjct: 179 KRDDAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L K E AL++++++ + G +PD NILI C G+T+ + + Y+ N
Sbjct: 239 LLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSL--YLDMN 296
Query: 236 R 236
R
Sbjct: 297 R 297
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A + +++S GF D TY ++ F + I+ ++ E+ ++KG +DA Y+
Sbjct: 75 VEEAMSIWELMTKS-GFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVLDAFAYS 133
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ L ++ AV++ M C P Y A +K L + +A +++EM
Sbjct: 134 AMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTT 193
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
PPN TY++L++ L + ++ EA ++ +M E G+ P ++L++ C
Sbjct: 194 DCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLC 245
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 174/434 (40%), Gaps = 71/434 (16%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V++ + E ++ DAV Y ++++ AG + +WE M +E ++
Sbjct: 2 ESGDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMG-REGSRSVA 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF N +V+EA +++ M + G + TY +L+ + G ++L I
Sbjct: 61 SFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
++ G D A + +I CK + + +L M + V+ ++ A +
Sbjct: 121 EQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKR 180
Query: 258 DSLLWQVHPQFSPEFISDNDAV----EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
D DAV E TTD ++ L+ L K + L+
Sbjct: 181 D------------------DAVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLV 222
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM-DLNLERTAYLALIGILIK 372
+++K L+ +VI+ YS+ M L L +AL
Sbjct: 223 KEMLEKG--LNPSVIT--------------------YSLLMKGLCLGHKVEMAL------ 254
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---A 429
++ ++TK G V + +LIH L S + A ++ L C
Sbjct: 255 --------QLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLY-LDMNRWNCAPNLV 305
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
T L+ ++ G+ AL I+ + + + P + ++N+ L GL R+SDA +
Sbjct: 306 TQNTLMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLH-- 363
Query: 490 KSIQADALSKDAVP 503
DA+ K +P
Sbjct: 364 -----DAVRKKIIP 372
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W R + ++ M+ + +++ ++ELM + G D+VTY ++H
Sbjct: 48 WEMMGREGSRSVASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKN 107
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G ++ +++I E + K +Y+A + L ++++A V MI+ G PN + Y
Sbjct: 108 GYINKSLHILEIAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVY 167
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L++ L+ A K ++A+ IF +M P+ A +ILI+ CK
Sbjct: 168 NALIKGLIGASKRDDAVRIFREMGTTDCPPNIATYSILIDGLCKG 212
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEAKRISSMKYVFEL 91
S +N + K +EKA N + RS G + Y ++ + G +KR +++ +F
Sbjct: 133 SAMINALCK-ESKLEKAVSVLNGMIRS-GCKPNTHVYNALIKGLIGASKRDDAVR-IFRE 189
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M + TY+ ++ L A ++ +EM K P++++Y+ MK L L +
Sbjct: 190 MGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHK 249
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V+ A ++ ++ ++G P+ + +L+ L GK + AL ++ M P+ N
Sbjct: 250 VEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNT 309
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L+E K G R ++I + +N L + L+ + +W +H +
Sbjct: 310 LMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKK 369
Query: 272 FI 273
I
Sbjct: 370 II 371
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 107/486 (22%), Positives = 189/486 (38%), Gaps = 58/486 (11%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
S W +++LK I D T N VL EK+ + +S G+ TY T
Sbjct: 176 SVWSFLKEMLKR-KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS-GYAPTIVTYNT 233
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+L + + R + + + M+ KG++ D TY ++H L + + + +M+ +
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 293
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+P V+Y + +V A+ + EM+ GL PN T+ L++ + G ++EAL
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 353
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL 248
++F M+ G+ P + + +L++ CK E MK N + + Y + L
Sbjct: 354 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
DE LL + S + I D D V + L+ K
Sbjct: 414 CKNGFLDEAVVLL----NEMSKDGI-DPDIVTY------------SALINGFCKVGRFKT 456
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
++ I + + + ST+I C A+ +E + + + L+
Sbjct: 457 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 516
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
L K + E + MT G +LP T
Sbjct: 517 SLCKAGKVAEAEEFMRCMTSDG-----------------------------ILPN----T 543
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
++ LI Y ++G KA ++ M + G HP+ T+ LL GL K G + +AE + K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 489 KKSIQA 494
++ A
Sbjct: 604 LHAVPA 609
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 173/455 (38%), Gaps = 65/455 (14%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ ++G +Y +LD + + + M+ G+ + +TYT ++ L
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G +D AV + EM P IV+Y+A + R K A ++ + + GL PN Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ L+ R G +EA+ I+ M G D N+L+ CKAG+ +R M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 235 NRLALRYPVFK----------EALQTFKVADENDSLLWQVHPQFSPEFISDN-------- 276
+ + F E L+ F V DE + HP F F +
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV--GHHPTF---FTYGSLLKGLCKG 591
Query: 277 ----DAVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
+A +F+ + P ++D L+ + K NL SL ++ +SI DS
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 329 STIIEVNCDHRRRDGALL-AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++I C + A+L A E + ++ + Y + + K + E+M
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
GH+ P+ T A+I Y G +K
Sbjct: 712 NLGHT-----------------------------PD----IVTTNAMIDGYSRMGKIEKT 738
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ M + P+L T+N+LL G K VS +
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 29 IKWDSYTVNQVL-KTHPPMEKAWLF-FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
++ D YT N ++ K E W F V S G + D+ T M+ + R +
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
V M ++GI+ ++ Y +++ L GD+ A + EEM + P V+ +A ++ L
Sbjct: 880 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ EAT + + M++ L P ++T LM + G EALE+ M G++ D
Sbjct: 940 AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999
Query: 207 AACNILIEKCCKAGE 221
+ N+LI C G+
Sbjct: 1000 VSYNVLITGLCAKGD 1014
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 180/450 (40%), Gaps = 22/450 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
++ YT +D +A + + Y E M G D VT +++ S G ++ ++
Sbjct: 683 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + P + +Y + V + +Y+ +I G+ P+ T L+ + +
Sbjct: 743 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
E L+I GV+ D+ N+LI KCC GE +++ M ++L
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK--- 859
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
D S+L + H + + + ++ + + + GL + K
Sbjct: 860 -------DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
V + +++ + +SA++ + + + D A L + +KM L ++
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCG----KADEATLLLRFMLKMKLVPTIASFT 968
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
L+ + K + E+ M+ G L + +LI L + A +++ + D
Sbjct: 969 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028
Query: 425 Q--KCTATYTALI-GVYFSAGSADKALKIYKTMCRKGIHPSLG----TFNVLLAGLEKLG 477
TY ALI G+ + A I K + +G S+ + L +EKL
Sbjct: 1029 GFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSHRNLKMAMEKLK 1088
Query: 478 RV-SDAEIYRKEKKSIQADALSKDAVPMEE 506
+ +D + +E+ +Q++ LSK+ + + E
Sbjct: 1089 ALQNDIAVCHREELDLQSNVLSKNQLKLFE 1118
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 10/219 (4%)
Query: 20 AQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTM 72
A+ LK+L P D+ N +L K+ + LF V RS D +TYT++
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS--ILPDSYTYTSL 654
Query: 73 LD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+ + + K + ++ + E + + V YT + + AG + E+M
Sbjct: 655 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 714
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P IV+ A + ++++ D+ EM + PN TY +L+ + +
Sbjct: 715 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 774
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
++ + G+ PDK C+ L+ C++ + IL+
Sbjct: 775 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK 813
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 194/495 (39%), Gaps = 69/495 (13%)
Query: 11 ILKYSTWDSAQDLLKNL--------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
+LK D+A+ L+ + P +D V+ MEKA F+ + S G
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC--VMSKEGVMEKAKALFDGMIAS-GL 378
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
Y ++++ + K + + M+++ I I TY +V+ + ++GD+DGA N
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
I +EM C P +V YT +K N R +A V KEM ++G+ P+ + Y L+ L
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+A + +EA +M E G++P+ I +A E + +Y+KE R P
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD---KYVKEMRECGVLP 555
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+ L T GL+ K
Sbjct: 556 --NKVLCT--------------------------------------------GLINEYCK 569
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
K ++ S ++D+ I D+ + ++ + + D A F + + +
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y LI KL K + I +EM + G + V + +L LG R K LL
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML---LGGFCRSGEIEKAKELLD 686
Query: 423 ED-----QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
E TY +I Y +G +A +++ M KG+ P + L+ G +L
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 478 RVSDA-EIYRKEKKS 491
V A I+ KK
Sbjct: 747 DVERAITIFGTNKKG 761
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 170/429 (39%), Gaps = 22/429 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + D TY+ ++D + + + K + M GINI Y + +S G ++
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ M P +Y + ++ V++ ++ EM +R + + YTY ++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + +G + A I +M +G +P+ LI+ + + +L+ MKE +A
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y L K DE S L VE V ++
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFL-----------------VEMVENGLKPNAFTYGA 527
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ ++ + D + + + + + + + +I C + A A+ V
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ + Y L+ L K + EI EM G + V+ +LI+ A+
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
IF + E+ Y L+G + +G +KA ++ M KG+HP+ T+ ++ G
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 474 EKLGRVSDA 482
K G +++A
Sbjct: 708 CKSGDLAEA 716
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D F+Y +++ F + + +F+ M E+G+ + + Y ++ +G++
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + +EM +K +P V+Y + + + EA ++ EM +GL P+ + YT L
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++ R E A+ IF + G A N LI K G+T
Sbjct: 739 VDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKT 782
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 129/605 (21%), Positives = 220/605 (36%), Gaps = 113/605 (18%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLL--KNLPIKWDSYTVNQVLKTHPPMEKAWL--FFNWV 56
+ D + + ILK W +D L NL I+ + V VL++ + + L FFNWV
Sbjct: 31 LSDASAEIAGILKQENW---RDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWV 87
Query: 57 SRSRGFNH--DRFTYTTM-LDIFGEAKRISSMKYVFELMQEK------------------ 95
+ D F++ + L FG ++ S V E M E+
Sbjct: 88 DSQKVTEQKLDSFSFLALDLCNFGSFEKALS---VVERMIERNWPVAEVWSSIVRCSQEF 144
Query: 96 -GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G + D V + + G ++ AV ++ E P + + L +R+
Sbjct: 145 VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE---------------------EALEI 193
DVYK M++R + + TY +L+ RAG + AL++
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKL 264
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL---RYPVFKEALQT 250
M G+ P K ++LI+ CK +L M ++L Y + + L
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 251 FKVADENDSLLWQVHPQ---------------FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ AD L+ ++ S E + + F G + Q
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 296 LVLIL---LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
++ ++KN+ LL + ++I + T+++ C DGA + +
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
Y LI ++ + F +++EM + G + ++ LI L A+R
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 413 PAAKIFSLLPED--QKCTATYTALIGVYFSA---GSADKALK------------------ 449
A + E+ + TY A I Y A SADK +K
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 450 --------------IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK-KSIQ 493
Y++M +GI T+ VL+ GL K +V DA EI+R+ + K I
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 494 ADALS 498
D S
Sbjct: 625 PDVFS 629
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 193/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLXPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P T+ VL+ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + S+L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAIXYST------------LLPGLCNAEKMSEARSILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I C D A + +++ + E Y LI K + +
Sbjct: 287 APTDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ AAK +L+ + Q
Sbjct: 347 KLLDKLIEKDI---ILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKWGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAK 458
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 142/340 (41%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ ++ F + ++ + FE M+ + I+ D VTY ++++ +
Sbjct: 143 SEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXE 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN Y+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G +L+ M
Sbjct: 263 PGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F A + D + + + I + + P+
Sbjct: 318 -IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPM- 375
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ L ++L+ ++ +Q D ++T+I + D A +
Sbjct: 376 -----IEYLCNNGQAAKAETLVRQLLKWGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 430 LRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDH 469
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TF VL+ G G
Sbjct: 105 KMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 181/435 (41%), Gaps = 38/435 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G +++RF + + R + + M G ++ + TY+ + L +
Sbjct: 41 RVFGIDYNRF-----IGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEF 95
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
N+ ++M+ C P I ++ Y+ +LF +R + A +V+ M++RG P+ T+T++
Sbjct: 96 TFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTII 155
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII-LILRYMKENR 236
++ L + K++ A++ + M + G++PD AC L C G+ LI+ +
Sbjct: 156 IDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGL 215
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQV----HPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ V+ + F A D L V P+ ++ N + + + ++
Sbjct: 216 SEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAV 275
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
LLKK AI+ D + +++ +C D A L +
Sbjct: 276 K------LLKKMECSAIEP------------DVYSYNQLLKAHCKANHPDKAYLFMVTKM 317
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RLGS-- 407
+ +Y +I ++ + ++ EEM + G + V +LI R G+
Sbjct: 318 VPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSD 377
Query: 408 -ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A++ + LLP+ YT +I + +G + A I+ M KGI P + ++
Sbjct: 378 MAKKLLDLMAGMGLLPD----RIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSY 433
Query: 467 NVLLAGLEKLGRVSD 481
N L+ G K RV +
Sbjct: 434 NALINGFCKSLRVGE 448
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 42/238 (17%)
Query: 17 WDSAQDLLKNL---PIKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYT 70
++ A LLK + I+ D Y+ NQ+LK H +KA+LF +GF D +Y
Sbjct: 271 FEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC-DVVSYN 329
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVT--------------------------- 103
T++ F +FE M KGI D VT
Sbjct: 330 TIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGM 389
Query: 104 --------YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
YT+++ +G V+ A +I+ +M K P +VSY A + + RV E
Sbjct: 390 GLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEV 449
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+Y++M+QRG P+ TY +++ LVR K +A ++ +M E G+ D+ +LI
Sbjct: 450 MHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLI 507
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 154/418 (36%), Gaps = 85/418 (20%)
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
+ + + Y + + AG +D AV +++EM L EC + Y ++ +L + R A
Sbjct: 5 LGVHRLIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAH 64
Query: 157 DVYKEMIQRGLPPNCYTYT-----------------------------------VLMEYL 181
Y +M G + +TY+ + + L
Sbjct: 65 HYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLL 124
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
R + E ALE+F +M E G +PD I+I+ CK MK+
Sbjct: 125 FRENREESALEVFGRMVERGREPDVVTFTIIIDGLCK-------------MKK------- 164
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
F A+Q + L + P DN A + + +D LI+
Sbjct: 165 --FDAAVQFW---------LNMLDKGIRP----DNKACVALAVGLCDGGQVDLAYELII- 208
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
++SG + ++ + V + +I C R D AL + + +
Sbjct: 209 ---------GVISGGLS---EVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLV 256
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA--KIFS 419
Y L+ F + +++++M + VY L+ A P A +
Sbjct: 257 TYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTK 316
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
++P+ +Y +I + S + +A K+++ M RKGI P + TF +L+ + G
Sbjct: 317 MVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREG 374
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 154/435 (35%), Gaps = 61/435 (14%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D + + L++ R S VF M E+G D VT+T ++ L D AV W
Sbjct: 113 DIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFW 172
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP-NCYTYTVLMEYLVR 183
M K P + A L +V A ++ +I GL + Y L+ R
Sbjct: 173 LNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCR 232
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
AG+ ++AL + S M G +PD N+L+ CC + +L+ M+ + +
Sbjct: 233 AGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYS 292
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG-------- 295
+ + L+ A+ D + + P+ D V T I+ SI
Sbjct: 293 YNQLLKAHCKANHPDKAYLFMVTKMVPKGFCD---VVSYNTIIKAFCSISNNRRAYKLFE 349
Query: 296 ----------------LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
L+ L++ N LL + + D +TII+ +C
Sbjct: 350 EMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSG 409
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ + A F V+ + + +Y ALI K +V + E+M + G
Sbjct: 410 KVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGS-------- 461
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
P++ TY +IG A +++ M +G+
Sbjct: 462 ---------------------FPDE----VTYKLIIGALVRENKLSDACRVWDQMMERGL 496
Query: 460 HPSLGTFNVLLAGLE 474
G +L+ ++
Sbjct: 497 TLDRGISEMLINAIQ 511
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 199/471 (42%), Gaps = 27/471 (5%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR--GFNHDRFTYTTMLDIFGEAKRISSMK 86
I+ + YT+N ++ K F+ V R+ GF + T++T+++ F R+S
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV 159
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ + M E + VT ++++ L G V A+ + + M C ++Y + +
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ A D++++M +R + + Y+++++ L + G ++AL +F++M+ G++ D
Sbjct: 220 CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADV 279
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLW 262
A + +I C G +LR M + F + F K+ + +
Sbjct: 280 VAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
V +P+ I+ ++ I+G K+ L + +L ++ K +
Sbjct: 340 MVARGIAPDTIT-------YSSLIDG-----------FCKENRLGEANQMLDLMVSKGCE 381
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+ S +I C +R D + F L + Y L+ + E+
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFS 440
+EM G V +L+ L A +IF + + + Y +I +
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCN 501
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRKEKK 490
A D A ++ ++ KG+ P + T+NV++ GL K G +S+A+ ++RK K+
Sbjct: 502 ASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKE 552
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 95/180 (52%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY+ +++ + +AKR+ + +F + KG+ D VTY +++ +G ++
Sbjct: 377 SKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLN 436
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++EM + P++V+Y + L N +++A +++++M + + Y +++
Sbjct: 437 VAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIII 496
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ A K ++A +F + GV+PD N++I CK G ++ R MKE+ A
Sbjct: 497 HGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCA 556
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G D TY T++ F ++ +++ K +F+ M +G+ VTY ++ L + G++
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQ 471
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ I+E+M+ I Y + + +V +A ++ + +G+ P+ TY V++
Sbjct: 472 KALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMI 531
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L + G EA +F KM+E G P NILI
Sbjct: 532 GGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG TY +LD + + +FE MQ+ + + Y ++H + NA VD
Sbjct: 447 SRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVD 506
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + +K P +++Y + L + EA ++++M + G P+ TY +L+
Sbjct: 507 DAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+ ++E+ +M+ G D + +++
Sbjct: 567 RAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 193/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V +++ M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ VL+ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + S+L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARSILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I C D A + +++ + E Y LI K + +
Sbjct: 287 APTDNSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ AAK +L+ + Q
Sbjct: 347 KLLDKVIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAK 458
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 143/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ ++ F + ++ + FE M+ + I+ D VTY ++++ +
Sbjct: 143 SEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMX 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G +L+ M
Sbjct: 263 PGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F A + D + + + I + + P+
Sbjct: 318 -IRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKVIEKDIILRPQSTLHLEPSAYNPM- 375
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ L ++L+ ++ +Q D ++T+I + D A +
Sbjct: 376 -----IEYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 430 LRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDH 469
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFD 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNVL+ G G
Sbjct: 105 RMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 177/435 (40%), Gaps = 52/435 (11%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y M+ ++ ++ + +F MQE DA Y S++H S AG A+NI E+M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
PT +Y + K+A ++ K+M + G+ P+ T+ +++ L +Y
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
+A+ F M+ A V D NI+I K G+ I + M+E R V
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV---- 189
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
T+ + + QV +N F L + +G+ K N+VA
Sbjct: 190 -TYTSIMHSYCIYGQV----------ENCKAIF-------DLMVAEGV------KPNIVA 225
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNC-------------DHRRRDGALLAFEYSVKMD 355
+SLL + + ++ I +I+ N + R A E KM
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Query: 356 LNL---ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
N + +Y ALI + ++ EM K G V + L+ G R+
Sbjct: 286 KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ-- 343
Query: 413 PAAKIFSLLPEDQK-----CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
+I ++L + T Y + I Y S G +KAL++Y +M + P T+N
Sbjct: 344 -ITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYN 402
Query: 468 VLLAGLEKLGRVSDA 482
+L++G KLG+ +++
Sbjct: 403 ILISGSSKLGKYTES 417
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/523 (20%), Positives = 220/523 (42%), Gaps = 69/523 (13%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFT 68
+YS S +++K + D++T+N ++ K E LF + R D T
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
YT+++ + ++ + K +F+LM +G+ + V Y S++ ++ G A+ I+ +K
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P IVSYT+ + + + ++A +V+ +M + PN +Y L++ AG +
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL-----RYMKENRLA----- 238
EA+ + +M++ G+QPD + + L+ C + + I IL R + N +A
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGI 370
Query: 239 ---LRYPVFKEALQTFKVADEN----DSLLWQVHPQFSPEFISDNDAVEF----VTTDIE 287
L + +++AL+ + E+ D++ + + S + +++ F V + +
Sbjct: 371 KSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVS 430
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS--------------------------- 320
+ L+ +K+ L +S S M KS
Sbjct: 431 STKEVYSSLIYSYIKQGKLSEAESTFSS-MKKSGCFPDVLTYTTLIQAYNAGGGWKRAWD 489
Query: 321 ---------IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
I D+ + S+++E + L E+ K + L + +Y +I
Sbjct: 490 LFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCT 549
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--- 428
+ + +E++E + + S+ V +++ LG + K+F + C+
Sbjct: 550 MIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTS--CSTVG 607
Query: 429 -ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF-NVL 469
+TY ++ G K +++ + M G+HP+L F NVL
Sbjct: 608 LSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVL 650
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 171/429 (39%), Gaps = 34/429 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ +L + S FE+M+ + D T ++H L G A
Sbjct: 111 GVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEA 170
Query: 121 VNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ ++ M+ + +C P +V+YT+ M + +V+ ++ M+ G+ PN Y L+
Sbjct: 171 IELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLL 230
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
G + EAL IF+ +++ G++PD + L+ ++ + + MK+N
Sbjct: 231 GAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCK 290
Query: 238 --ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y +A + + E LL ++ P+ +S ++T
Sbjct: 291 PNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVS-------IST---------- 333
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ + + + I+++L + I L++ ++ I+ + AL + +
Sbjct: 334 -LLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRES 392
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH------RLGSA 408
++ + Y LI KL + + E+M + S + + LI+ +L A
Sbjct: 393 NVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEA 452
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
+ K P+ TYT LI Y + G +A ++K M GI P +
Sbjct: 453 ESTFSSMKKSGCFPD----VLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSS 508
Query: 469 LLAGLEKLG 477
L+ K G
Sbjct: 509 LMEAFNKGG 517
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 136/349 (38%), Gaps = 18/349 (5%)
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y +++ +++V +A ++ EM + P+ Y L+ RAG++ A+ I M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
A + P + N +I C AG + + + + M EN + L K +
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+ SD + + + L+K L + + +
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNII--------------IHCLVKIGQCGEAIELFNSMRE 179
Query: 319 KSIQLDSAVIS--TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+ + V++ +I+ C + + + F+ V + AY +L+G
Sbjct: 180 RRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMH 239
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTAL 434
+ I + K G + L++ G + +P A ++F+ + ++ + +Y AL
Sbjct: 240 REALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNAL 299
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
I Y SAG +A+ + M + GI P + + + LLA + +++ E
Sbjct: 300 IDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIE 348
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 32 DSYTVNQVLKTHPPMEKA----WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
D +T N ++ H KA LF V + GF D TY ++L F + + +++
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFRELVEK--GFMPDAITYNSLLYAFAKEGNVDKVEH 384
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
E + + G + +TY +++H G +D AV +++EM+ C P V+YT + L
Sbjct: 385 TCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLG 444
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+R+ EA V ++M GL P ++ L+ + G+ +A F M +GV+PD+
Sbjct: 445 KMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRL 504
Query: 208 ACNILIEKCCKAGETRTIILILRYM 232
A ++++ ++G+T ++ + R M
Sbjct: 505 AYLVMLDVFARSGDTEKMLCLYRKM 529
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 84/173 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + TY TM+ ++G+ R+ +++ M+ G DAVTYT ++ L + A
Sbjct: 393 GFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEA 452
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ E+M PT+++++A + R +A + + MI G+ P+ Y V+++
Sbjct: 453 GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDV 512
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
R+G E+ L ++ KM +PD +L+ K + I +++ M+
Sbjct: 513 FARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDME 565
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISS---MKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
RG + D ++ T+++ ++ +++ + +FE+ Q G+ D +TY +++ S + +
Sbjct: 250 RGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ-SGLRPDVITYNTLISACSQSSN 308
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ AV ++E+M EC P + +Y A + + + +EA +++E++++G P+ TY
Sbjct: 309 LEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNS 368
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L+ + G ++ ++ +AG + ++ N +I K G
Sbjct: 369 LLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMG 412
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 163/443 (36%), Gaps = 73/443 (16%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F W++RS +L + G A++ S + VF +G + + ++M +
Sbjct: 177 FEWLARSSAPASR--AVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQ--VFNAMMGVYA 232
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE-------ATDVYKEMIQR 165
+G D A + + M + P +VS+ +N R K A D+ E+ Q
Sbjct: 233 RSGRFDDARQLLDTMHDRGIDPDLVSFNT-----LINARSKSGCLAAGVALDLLFEVRQS 287
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KCCKAGET 222
GL P+ TY L+ ++ E+A+ +F M + +PD N ++ +C KA E
Sbjct: 288 GLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEA 347
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ F+E V F P+ I+ N
Sbjct: 348 ERL------------------FREL----------------VEKGFMPDAITYN------ 367
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
L+ K+ N+ ++ ++ + + +T+I + R D
Sbjct: 368 ------------SLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLD 415
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A+ ++ M + Y +I L K+N + +++E+MT AG + + LI
Sbjct: 416 LAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALI 475
Query: 403 HRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
R A F + + Y ++ V+ +G +K L +Y+ M
Sbjct: 476 CAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYR 535
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P + VLL L K + + E
Sbjct: 536 PDDDMYQVLLVALAKEDKCEEIE 558
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R+ + V E +Q+ I T ++ + AGDV + I+ MK P + Y
Sbjct: 830 RLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYR 889
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ + +L ++R ++ + EM G P+ L+ AG ++ +++ + EA
Sbjct: 890 SMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEA 949
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
G++PD+ N LI C++ +L M + L + +K L
Sbjct: 950 GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLL 997
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D +L+++ A V+ + E G+ D TY +++ + +
Sbjct: 915 GFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEG 974
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM + P + SY + + + ++A +++EM + N Y ++M+
Sbjct: 975 FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
AG + +A + + M+E G++P A +IL+ AG+ R +L +K + L
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSL 1091
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 181/435 (41%), Gaps = 37/435 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G D TYT M+D G+ RI+ V E M + G+ + +++++ + G
Sbjct: 425 RAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRR 484
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A N ++ M P ++Y + + + ++ +Y++M+ P+ Y VL
Sbjct: 485 ADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVL 544
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE-KCCKAGETRTIILILRYMKENR 236
+ L + K EE E+ M+ +LI+ +C G L+ K +
Sbjct: 545 LVALAKEDKCEEIEEVIQDMELLCRMNLGIISTMLIKARCVSQGAKLLKKACLQGYKPDI 604
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQV--HPQFSPEFISDNDAVEFV--TTDIEGPLSI 292
+LR + + T K +E SLL + H FS + IS+ + T I
Sbjct: 605 KSLR-SIMNAYVMTEK-HEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSISAYEQY 662
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
Q L+L +N + L++ + +++ S +V CD + + E S
Sbjct: 663 SQRLMLK-YPGQNCNLYEYLITCL------IEAEFFSEACQVFCDMQ-----FIGIEAS- 709
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAE-IVEEMTKAGHSLGVY-LGALLIHRLGSARR 410
++ Y ++I KL FP+ A ++++ ++G L + ++I G +
Sbjct: 710 -------KSIYESIISTYCKLG-FPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKL 761
Query: 411 PVPAAKIFSLLPE----DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A + L + D++ + ALI Y +G +KA ++ M + G P++ +
Sbjct: 762 WQQAEILVKGLRQASGIDRR---IWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSV 818
Query: 467 NVLLAGLEKLGRVSD 481
N ++ L GR+ +
Sbjct: 819 NGMMRALIVDGRLDE 833
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 1/188 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+ + N + + RG +Y ++L +A+ +FE M+ K ++ Y
Sbjct: 972 EEGFTLLNEMGK-RGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHM 1030
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M NAG+ A N+ MK PTI + M + +EA +V +
Sbjct: 1031 MMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSS 1090
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L + Y+ + + ++ G Y +M+ GV+PD I +T I
Sbjct: 1091 LEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAI 1150
Query: 227 LILRYMKE 234
L+L+ +++
Sbjct: 1151 LLLKSLQD 1158
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 79/178 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G+ + Y +M+ + R ++ + M+ G D ++++ + AG+
Sbjct: 877 KAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNF 936
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D ++ + P +Y + + + R +E + EM +RGL P +Y L
Sbjct: 937 DRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSL 996
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ +A E+A +IF +M+ Q +++ +++++ AG +L MKE+
Sbjct: 997 LAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKED 1054
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 125/336 (37%), Gaps = 57/336 (16%)
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++A V+ MI+ G P + +M L+ G+ +E + ++Q+ + K+ +L
Sbjct: 797 EKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLL 856
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
++ KAG+ ++ I MK +++ + SLL H +F
Sbjct: 857 LDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMI----------SLLCH-HNRFRD-- 903
Query: 273 ISDNDAVEFVTTDIEGP-----LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
VE + ++EG L+I L+ + N + I++ ++ D
Sbjct: 904 ------VELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDT 957
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T+I + C R + K L + +Y +L+ K + +I EEM
Sbjct: 958 YNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR 1017
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
+ L + Y ++ +Y +AG+ KA
Sbjct: 1018 SKSYQLN---------------------------------RSIYHMMMKIYRNAGNHSKA 1044
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ M GI P++ T ++L+ G+ +AE
Sbjct: 1045 ENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAE 1080
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 76/193 (39%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F + T +LD F +A + + ++ M+ G + Y S++ L +
Sbjct: 846 FKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVE 905
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EM+ P + A + + T VY+ +++ GL P+ TY L+
Sbjct: 906 LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMY 965
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
R+ + EE + ++M + G+ P + L+ KA I M+ L
Sbjct: 966 CRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNR 1025
Query: 242 PVFKEALQTFKVA 254
++ ++ ++ A
Sbjct: 1026 SIYHMMMKIYRNA 1038
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 56/144 (38%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS+ + +R Y M+ I+ A S + + +M+E GI T +M AG
Sbjct: 1017 RSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQP 1076
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A N+ +K + + Y+ N T EM + G+ P+ +T
Sbjct: 1077 REAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCF 1136
Query: 178 MEYLVRAGKYEEALEIFSKMQEAG 201
+ + +A+ + +Q+ G
Sbjct: 1137 IRAASLCEQTADAILLLKSLQDCG 1160
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY T++ ++ + R + M ++G+ +Y S++ + A + A
Sbjct: 950 GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQA 1009
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
I+EEM+ K Y MKI +A ++ M + G+ P T +LM
Sbjct: 1010 DQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTS 1069
Query: 181 LVRAGKYEEALEIFSKMQEAGVQ 203
AG+ EA + + ++ + ++
Sbjct: 1070 YGTAGQPREAENVLNNLKSSSLE 1092
>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 205/464 (44%), Gaps = 34/464 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T +++L F +++ +F M E G++ + V+Y ++++ L +G V A
Sbjct: 5 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 64
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N+ +M ++ IV+ T M LF + KEA +V++ +++ L PNC TY+ L++
Sbjct: 65 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 124
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ GK E A + KM++ V P+ + +I K G + +LR M + +
Sbjct: 125 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 184
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI-------EGPLSID 293
V+ + + A E D V F E S V DI G +
Sbjct: 185 TIVYAILIDGYFKAGEQD-----VADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEA 239
Query: 294 QGLVLILLKK---KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+ L++ + K ++V SL+ G + QL A +S + E+ + R D ++A+
Sbjct: 240 RSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQL--AALSIVQEMKEKNIRFD--VVAYNA 295
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVA-----EIVEEMTKAG-----HSLGVYLGAL 400
+K L L + + +I+L P +I+ EM G + + +G L
Sbjct: 296 LIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGL 355
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
+ G+ + A L+ E T+ L+ Y + ADK L+I++ + G+
Sbjct: 356 C--KTGAVEKAESALDEM-LVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLE 412
Query: 461 PSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADALSKDAV 502
SL +N L+ +LG A++ E K+ I AD ++ +A+
Sbjct: 413 LSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNAL 456
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 195/488 (39%), Gaps = 86/488 (17%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ 93
+N + K+ ME FN S+ RG + D T TT++D + + + VFE +
Sbjct: 52 INSLFKSGRVMEA----FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETIL 107
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
+ + + VTY++++ G ++ A + ++M+ + P ++++++ + +
Sbjct: 108 KLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLS 167
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+A DV +EM+QR + PN Y +L++ +AG+ + A + +M+ ++ +IL+
Sbjct: 168 KAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILL 227
Query: 214 EKCCKAG---ETRTII-----------------LILRYMKE-NRLALRYPV--FKEALQT 250
+ G E R++I LI Y KE N+LA V KE
Sbjct: 228 NNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIR 287
Query: 251 FKVADENDSLLWQVH-PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK----KN 305
F V N + + ++ P ++ + D + ++D +L +K N
Sbjct: 288 FDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALD---ILNEMKSYGIMPN 344
Query: 306 LVAIDSLLSGIMDKSI------QLDSAVISTIIEVNCDHR----------RRDGALLAFE 349
V + L+ G+ LD ++ + H+ + D L E
Sbjct: 345 AVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHE 404
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
V L L T Y LI + +L K +++EM K G S +
Sbjct: 405 KLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADL-------------- 450
Query: 410 RPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
TY ALI Y + +KALK Y M GI P++ T+N L
Sbjct: 451 -------------------VTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTL 491
Query: 470 LAGLEKLG 477
L GL G
Sbjct: 492 LGGLSNAG 499
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 174/450 (38%), Gaps = 73/450 (16%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SR + +L+ R+ + + M KGI+ D V Y S++ G+
Sbjct: 212 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 271
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A++I +EMK K +V+Y A +K L + + V MI+ GL P+C
Sbjct: 272 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDC------ 324
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
K E+AL+I ++M+ G+ P+ NILI CK G L M
Sbjct: 325 --------KTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEF 376
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
K ++ + +++ D +L Q+H + V + +E L++ L+
Sbjct: 377 VPTPITHKFLVKAYSRSEKADKIL-QIHEKL-------------VASGLELSLTVYNTLI 422
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ + +L ++ + I D + +I C + AL + +
Sbjct: 423 TVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIA 482
Query: 358 LERTAYLALIGIL----IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
T Y L+G L + + ++V EM + G VP
Sbjct: 483 PNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL--------------------VP 522
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
A ATY L+ Y G+ K + ++ M KG P+L T+NVL++
Sbjct: 523 NA-------------ATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 569
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
K G++ +A + + D L+K +P
Sbjct: 570 AKSGKMIEA-------RELLNDLLTKGRIP 592
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG---- 115
RG + D TY ++ + + + M GI + TY +++ LSNAG
Sbjct: 444 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEE 503
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++ + EM + P +Y + K+ ++ EMI +G P TY
Sbjct: 504 MMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYN 563
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
VL+ ++GK EA E+ + + G P+ +IL
Sbjct: 564 VLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 600
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 206/490 (42%), Gaps = 64/490 (13%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G+ D TY ++L F + +K + M + G D +TY +++H G
Sbjct: 345 SKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHG 404
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++ +MKL P ++YT + L +++ EA +V EM+ G+ P TY+ L+
Sbjct: 405 LALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALI 464
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
RAG+ EA E F M+ +G++PD+ A +++++ + E +++ R M + +
Sbjct: 465 CGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGIT 524
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQ-----FSPEFISD--------NDAVEFVTTD 285
V+ L+ ++ + + + +P+ I+ DA +
Sbjct: 525 PDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQAIASILVKGECYEDAAGMLRLA 584
Query: 286 IEGPLSIDQ-----GLVLILLKKKNLVAIDSL--LSGIMDKSIQLDSAVISTIIEVNCDH 338
I G ID L + A+D L L G + KS QL V I C
Sbjct: 585 ISGSDEIDSENLLSILSSYSSSGRQAEALDLLQFLKGHVSKSNQL---VAEASIVTLCKA 641
Query: 339 RRRDGALLAFEYSVKMD-LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG--HSLGV 395
++ D AL + + + D T Y +LI + + ++I +M G S +
Sbjct: 642 KQLDAALKEYNDTREFDWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSL 701
Query: 396 YLGALLIH-RLG---SARRPVPAAKIFSLLPEDQ-------------------------- 425
Y +L++ ++G +A + A+I +P D+
Sbjct: 702 YRSMVLMYCKMGFPETAHYLIDLAEIEG-MPFDKISIDVAVIETYGKLKLWQKAESLVGN 760
Query: 426 ---KCT----ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+CT + ALI Y ++G ++A ++ TM R G P++ + N LL L GR
Sbjct: 761 LRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGR 820
Query: 479 VSDAEIYRKE 488
+ + + +E
Sbjct: 821 LEELYVVTQE 830
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 7/188 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNA 114
R RG D ++ T+++ +A ++ EL+ E G+ D +TY +++ S
Sbjct: 237 RERGCEPDLVSFNTLINARLKAGAMTP-NVAIELLNEVRRSGLRPDIITYNTLISACSRE 295
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
+++ AV ++++M+ C P + +Y A + + +A ++KE+ +G P+ TY
Sbjct: 296 SNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTY 355
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ R G ++ EI ++M + G D+ N +I K G+ + + R MK
Sbjct: 356 NSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMK- 414
Query: 235 NRLALRYP 242
L+ R P
Sbjct: 415 --LSGRTP 420
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV--DGAVNIWEE 126
Y M+ ++ R + ++ + +LM+E+G D V++ ++++ AG + + A+ + E
Sbjct: 213 YNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNE 272
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
++ P I++Y + ++EA V+ +M P+ +TY ++ R G
Sbjct: 273 VRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGF 332
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+A ++F +++ G PD N L+ + G + I M
Sbjct: 333 SGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEM 378
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
N V RS G D TY T++ + VF+ M+ D TY +++
Sbjct: 269 LLNEVRRS-GLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVY 327
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G A +++E++ K +P V+Y + + V + ++ EM+Q G +
Sbjct: 328 GRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDE 387
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
TY ++ + G++ AL+++ M+ +G PD +LI+ KA +
Sbjct: 388 MTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANK 437
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 14/255 (5%)
Query: 32 DSYTVNQVL--KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D+Y V+ + H P E L R G TY +++ FG+ + + + +F
Sbjct: 946 DTYNTLIVMYCRDHRPEEGCSLMHEM--RRIGLEPKLDTYKSLIAAFGKQQLVVDAEELF 1003
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
E + KG +D Y +M N+G+ A + MK PTI + M +
Sbjct: 1004 EELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSS 1063
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ +EA V + + GL + Y+ +++ ++ Y ++ +M++ G++PD
Sbjct: 1064 GQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIW 1123
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV-HPQF 268
I + T IL+L+ ++++ L + + + +DSL+ +V H
Sbjct: 1124 TCFIRAASLSEHTHDAILLLQALQDSGFDLPSRL---------ITERSDSLVLEVDHCLE 1174
Query: 269 SPEFISDNDAVEFVT 283
E + DN A FV
Sbjct: 1175 MLETMEDNAAFNFVN 1189
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 86/179 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D + +ML ++ +++ ++E G+ D TY +++ +
Sbjct: 905 GFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEG 964
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM+ P + +Y + + V +A ++++E++ +G + Y ++M+
Sbjct: 965 CSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKI 1024
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+G + +A ++ S M++AGV+P A ++L+ +G+ + +L +KE L+L
Sbjct: 1025 YRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSL 1083
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 102/245 (41%), Gaps = 7/245 (2%)
Query: 13 KYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDR 66
K W A+ L+ NL + D N +++ + E+A FN + R G +
Sbjct: 747 KLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRD-GPSPTV 805
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ +L R+ + V + +Q+ G I + ++ + ++ A I++
Sbjct: 806 DSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQG 865
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK +PT+ Y + +L RV++ + EM + G P+ + ++
Sbjct: 866 MKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDD 925
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ + ++I+ +++E G+QPD+ N LI C+ ++ M+ L + +K
Sbjct: 926 FRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKS 985
Query: 247 ALQTF 251
+ F
Sbjct: 986 LIAAF 990
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/357 (17%), Positives = 137/357 (38%), Gaps = 26/357 (7%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE--ALE 192
T+ Y A M + R + + M +RG P+ ++ L+ ++AG A+E
Sbjct: 209 TVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIE 268
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF- 251
+ ++++ +G++PD N LI C + + + M+ + + + +
Sbjct: 269 LLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYG 328
Query: 252 --KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+ + + L ++ + + P+ ++ N L+ ++ N+
Sbjct: 329 RCGFSGKAEQLFKELESKGYFPDAVTYN------------------SLLYAFAREGNVDK 370
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ + + ++ D +TII + + AL + + Y LI
Sbjct: 371 VKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLID 430
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
L K N + A ++ EM G + + LI A + + A + F + +
Sbjct: 431 SLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRP 490
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
Y+ ++ V+ A KA+ +Y+ M R GI P + +L L + +V D +
Sbjct: 491 DQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQ 547
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/415 (18%), Positives = 156/415 (37%), Gaps = 88/415 (21%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+++ +G+ K + + ++++ N+D + +++ + +G + A ++ M
Sbjct: 741 VIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDG 800
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
PT+ S ++ L ++ R++E V +E+ G + + ++++ R EA
Sbjct: 801 PSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAK 860
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+I+ M+ AG P I+I CK R + ++ M+E
Sbjct: 861 KIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEE----------------- 903
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
F P+ LSI ++ + +
Sbjct: 904 --------------AGFRPD------------------LSIWNSMLRLYTGIDDFRKTVQ 931
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNC-DHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+ I + +Q D +T+I + C DHR +G L E + IG+
Sbjct: 932 IYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHE--------------MRRIGLE 977
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTA 429
KL+T+ LI G + V A ++F LL + K
Sbjct: 978 PKLDTYKS----------------------LIAAFGKQQLVVDAEELFEELLSKGSKLDR 1015
Query: 430 T-YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ Y ++ +Y ++G+ KA K+ M G+ P++ T ++L+ G+ +AE
Sbjct: 1016 SFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAE 1070
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 104/508 (20%), Positives = 202/508 (39%), Gaps = 33/508 (6%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKT-------HPPMEKAWLFFNW 55
D + + + L+ + A LL LP D+ + N VL H ++ L
Sbjct: 53 DAAALLNRRLRGAPVTEACSLLSALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMS 112
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ +YTT++ ++R + MQ G+ D VTY +++ L +A
Sbjct: 113 REAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDAS 172
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++D A+ + +EM P +V Y+ ++ + R ++ V+++M +RG+ P+ +T
Sbjct: 173 ELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFT 232
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L++ L + GK +A ++ M + G++P+ N+LI CK G R + + + M +
Sbjct: 233 GLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDK 292
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+A + + E D + + + + + D V F + I G I +
Sbjct: 293 GVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSV-IHGLCKIGRM 351
Query: 296 LVLILLKKK--------NLVAIDSLLSG------------IMDK----SIQLDSAVISTI 331
+ +++ NLV + L+ G +MD+ ++ DS S +
Sbjct: 352 TQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSIL 411
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I D A + + E Y+ L+ + + + + EM K
Sbjct: 412 INGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCG 471
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKI 450
+ ++ S I +L E A TY+ LI +Y G ++A ++
Sbjct: 472 LDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERV 531
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
K M G P + F+ L+ G G+
Sbjct: 532 LKQMTASGFVPDVAVFDSLIKGYSAEGQ 559
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 99/207 (47%), Gaps = 3/207 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
+Y + L+ H ++ A + ++ S G D FTY+ +++ F + + + M
Sbjct: 374 NYLIGGFLRVHK-VKMAMNLMDELAIS-GLEPDSFTYSILINGFSKMWEVDRAEKFLCTM 431
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+++GI + Y ++ + G ++ A+ ++ EM K C ++Y+ + + +
Sbjct: 432 RQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDM 490
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
K + ++M+ GL P+ TY++L+ + G EEA + +M +G PD A + L
Sbjct: 491 KTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSL 550
Query: 213 IEKCCKAGETRTIILILRYMKENRLAL 239
I+ G+T ++ ++ M+ +A
Sbjct: 551 IKGYSAEGQTDKVLKLIHEMRAKNVAF 577
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 177/424 (41%), Gaps = 54/424 (12%)
Query: 100 DAVTYTSVMHWLSNAGD--VDGAVNIWEEMKLKECYPTI----VSYTAYMKILFLNDRVK 153
DAV+Y +V+ L G + A ++ +M +E +P VSYT M+ L + R
Sbjct: 82 DAVSYNTVLAALCRRGGDHLRQARSLLVDMS-REAHPAARPNAVSYTTVMRGLCASRRTG 140
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
EA + + M G+ + TY L+ L A + + ALE+ +M +GVQP+ + L+
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVF--------KEALQTFKVADENDSLLWQVH 265
C++G + + + M + +F KE +T K A D + V
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEG-KTGKAAKVKDMM---VQ 256
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQL 323
P ++ N VLI L K+ ++ +L + DK +
Sbjct: 257 RGLEPNVVTYN--------------------VLINSLCKEGSVREALTLRKEMDDKGVAP 296
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER--TAYLALIGILIKLNTFPKVAE 381
D +T+I D A+ E ++ D +E + ++I L K+ + +
Sbjct: 297 DVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVK 356
Query: 382 IVEEMTKAGHSLGV----YL--GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALI 435
+ E M + G + YL G L +H++ A + I L P+ + TY+ LI
Sbjct: 357 VREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPD----SFTYSILI 412
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQA 494
+ D+A K TM ++GI L + LLA + + G + A ++ + K+
Sbjct: 413 NGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL 472
Query: 495 DALS 498
DA++
Sbjct: 473 DAIA 476
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 89/161 (55%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF + TY++++D + K ++ K +F M + G+N D +Y +++ D
Sbjct: 248 KGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDA 307
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+N++EEM ++ P +V+Y + + L + ++ A + EM RG PP+ TY+ L++
Sbjct: 308 AMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLD 367
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L + ++A+ + +K+++ G+QP+ ILI CK G
Sbjct: 368 ALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGG 408
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA FN +++ G N D +Y +++ F + K + +FE M + I + VTY
Sbjct: 270 VNKAKSIFNNMAQG-GVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYN 328
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L +G + A+ + +EM + P I++Y++ + L N +A + ++ +
Sbjct: 329 SLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQ 388
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN YTYT+L+ L + G+ E+A IF + G + ++I C G
Sbjct: 389 GLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEA 448
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADEND 258
+ +L M+EN ++ +++ DEND
Sbjct: 449 LAMLSKMEENGCIPNAVTYEIIIRSLFDKDEND 481
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S ++ + K HP +KA + + +G + +TYT +++ + R + +FE +
Sbjct: 363 SSLLDALCKNHP-GDKAIALLTKL-KDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDL 420
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
KG NI+ TYT ++H N G A+ + +M+ C P V+Y ++ LF D
Sbjct: 421 LVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDEN 480
Query: 153 KEATDVYKEMIQRGL 167
+A + EMI RGL
Sbjct: 481 DKAEKLLLEMITRGL 495
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 128 KLKECYPTI----VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
L+EC+ + + A + +VKEA +V+ M+++G PN TY+ LM+
Sbjct: 207 NLRECFVSFMFQYLGMMAPVSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCL 266
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ +A IF+ M + GV PD + NILI CK T + + M
Sbjct: 267 VKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEM 315
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RG D TY+++LD + + ++++G+ + TYT +++ L G
Sbjct: 351 HDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRP 410
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A NI+E++ +K + +YT + + N EA + +M + G PN TY ++
Sbjct: 411 EDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEII 470
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGV 202
+ L + ++A ++ +M G+
Sbjct: 471 IRSLFDKDENDKAEKLLLEMITRGL 495
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 342 DGALLAFEYSVKMDLNLERTAYLAL----IGILIKLNTFPKVAEIVEE------MTKAGH 391
+G L A S++ D+N R +++ +G++ ++TF K ++ E M K G
Sbjct: 191 NGMLFAEVTSLRGDVNNLRECFVSFMFQYLGMMAPVSTFCKEGKVKEAKNVFAAMMKKGF 250
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
V + L+ + A IF+ + + +Y LI + D A+
Sbjct: 251 KPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMN 310
Query: 450 IYKTM-CRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+++ M CRK I P++ T+N L+ GL K G++S A
Sbjct: 311 LFEEMHCRK-IIPNVVTYNSLIDGLCKSGKISYA 343
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 189/441 (42%), Gaps = 23/441 (5%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKA F NW+ + GF D F+Y+T+++ + ++ +F+ M E+ + D Y
Sbjct: 166 EKARGFLNWMWKE-GFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNI 224
Query: 107 VMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ D A+ +W+++ + YP + ++ + L RV + ++ M Q
Sbjct: 225 LIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQN 284
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ YTY+ L+ L G ++A +F+++ E D N ++ C+ G+ +
Sbjct: 285 EREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKES 344
Query: 226 ILILRYMKENRLA--LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+ + R M++ + Y + + L DE +++W++ P + + +DN
Sbjct: 345 LELWRIMEQRNSVNIVSYNILIKGLLENGKIDE-ATMIWRLMP--AKGYAADNTTYGIFI 401
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
GL + K L ++ + K LD ++II+ C RR +
Sbjct: 402 ----------HGLCVNGYVNKAL----GVMQEVESKGGHLDVYAYASIIDCLCKKRRLEE 447
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A + K + L ALIG LI+ + + ++ M K G V +LI
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILIC 507
Query: 404 RLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L A + A+ + E+ + TY+ L+G + AL+++ + G+ P
Sbjct: 508 GLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEP 567
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
+ N+L+ GL +G++ DA
Sbjct: 568 DVMMHNILIHGLCSVGKLDDA 588
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 4/222 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + D + Y +++D + +R+ + + M + G+ +++ +++ L +
Sbjct: 422 SKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLS 481
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + M C PT+VSY + L + EA+ KEM++ GL P+ TY++L+
Sbjct: 482 DASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILL 541
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L R K E ALE++ + ++G++PD NILI C G+ + ++ M+
Sbjct: 542 GGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 239 LRYPVFKEALQT-FKVADEND-SLLWQVHPQ--FSPEFISDN 276
+ ++ FKV D N +++W + P+ IS N
Sbjct: 602 ANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYN 643
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 194/490 (39%), Gaps = 43/490 (8%)
Query: 38 QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGI 97
++LK+ A+ F+ +R G+ H Y +L EA+ ++ + + EL++ +
Sbjct: 15 KLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQEC 74
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEAT 156
D SV+ D A+++++ M+ + C P I SY + + +
Sbjct: 75 KCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVE 134
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
++ G+ PN TY VL++ + ++E+A + M + G +PD + + +I
Sbjct: 135 SLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDL 194
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
K G+ + + M E R+A + + F E D ++ Q + + D+
Sbjct: 195 AKTGKLDDALELFDEMSERRVAPDVTCYNILIDGF--LKEKDH---KMAMQLWDKLLEDS 249
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ----LDSAVISTII 332
V T +++ L K V D L I D+ Q D S++I
Sbjct: 250 SVYPNVKT---------HNIMISGLSKCGRV--DDCLK-IWDRMKQNEREKDLYTYSSLI 297
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM-----T 387
CD D A F V ER A++ ++ L F + +I E +
Sbjct: 298 HGLCDEGNVDKAESVFNELV------ERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSAD 445
+ +S+ + +LI L + A I+ L+P TY I G +
Sbjct: 352 EQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVN 411
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
KAL + + + KG H + + ++ L K R+ +A KE +SK V +
Sbjct: 412 KALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKE--------MSKHGVELN 463
Query: 506 EKICDLLYGG 515
+C+ L GG
Sbjct: 464 SHVCNALIGG 473
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FN + + F D TY TML F +I ++ +M+++ +++ V+Y
Sbjct: 306 VDKAESVFNELVERKAF-IDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYN 363
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G +D A IW M K +Y ++ L +N V +A V +E+ +
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESK 423
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G + Y Y +++ L + + EEA + +M + GV+ + CN LI +
Sbjct: 424 GGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDA 483
Query: 226 ILILRYMKEN 235
L++R M +N
Sbjct: 484 SLLMRGMGKN 493
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ +L ++I ++ + G+ D + + ++H L + G +D A
Sbjct: 529 GLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDA 588
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + M+ + C +V+Y M+ F AT ++ M + GL P+ +Y +++
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKG 648
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L + A+E F + G+ P NIL+
Sbjct: 649 LCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 62/150 (41%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y ++ EA + + M E G+ D TY+ ++ L ++ A+ +W +
Sbjct: 501 SYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQF 560
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P ++ + + L ++ +A V M R N TY LME +
Sbjct: 561 LQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDS 620
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCC 217
A I+ M + G+QPD + N +++ C
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTILKGLC 650
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + ++ ++ V M+ + + VTY ++M D + A
Sbjct: 564 GLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRA 623
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
IW M P I+SY +K L L RV A + + + G+ P YT+ +L+
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRA 683
Query: 181 LV 182
+V
Sbjct: 684 VV 685
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 171/420 (40%), Gaps = 20/420 (4%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V E M KG +D V++ + G VD AV + ++ C IVSY A +K L
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ R + ++ EM++ PN T+ L+ YL R G +E E+ ++M E G PD
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+I+ CK G IL M L + L+ A+ W+ +
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER-----WKEAEE 342
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
E + ++ VT +I GLV +++ LL ++ D
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE---------LLEQMLSHGCMPDVIT 393
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T+I C D A++ + +Y ++ L + E++ +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSA 444
+ G LI+ L A ++ + + C+ +Y+ +I AG
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKAGKT 512
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK-KSIQADALSKDAV 502
++AL++ M KGI P+ ++ + L + GRV+ +++ K +I++DA+ +AV
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 132/326 (40%), Gaps = 49/326 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++D F + + + + E M G D +TYT+V++ G +D AV +
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M C P VSYT +K L R +A ++ +MIQ+G PPN T+ L+ +L +
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G E+A+E+ +M G PD + + +I+ KAG+T
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT---------------------- 512
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+EAL+ V V+ SP I I + L ++
Sbjct: 513 EEALELLNV---------MVNKGISPNTI------------------IYSSIACALSREG 545
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + + I D +I+ D+ + + +I C D A+ F Y V + Y
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAG 390
LI L + E++ E+ G
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSRG 631
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T++ + V M E G D Y +++ + G ++ A I M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P +V Y +K L +R KEA ++ EM Q+ P + T+ +L+++ + G
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ +E+ +M G PD +I CK G +++L+ M
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMS 418
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/428 (19%), Positives = 164/428 (38%), Gaps = 22/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +Y +L AKR ++ + + M + VT+ +++ +L G +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M C P I Y + + ++ A ++ M GL PN Y +++
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L A +++EA E+ S+M + D NIL++ C+ G +I +L M L
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM------LS 384
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG--PLSIDQGLVL 298
+ + + V + F E + D + + G P ++ +VL
Sbjct: 385 HGCMPDVITYTTVIN-----------GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 299 I-LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L V + L+S ++ + + +T+I C + A+ + + +
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ +Y +I L K + E++ M G S + + + L R ++
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + + + Y A+I D+A+ + M G P+ T+ +L+ GL
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 476 LGRVSDAE 483
G +A+
Sbjct: 614 EGLAKEAQ 621
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/375 (18%), Positives = 139/375 (37%), Gaps = 62/375 (16%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P ++ ++ L R+ +A +V EM +G P Y V++E R+G + ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK----ENRLALRYPVFKEALQ 249
M G D CN+++ C+ G + +LR + E + V K
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFV---------------------TTDIEG 288
+ D + + V +P ++ N + ++ T DI
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+I G+ K+ +L + +L+ + ++ + +T+++ C R A
Sbjct: 289 YATIIDGIC----KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ D L+ + L+ + +V E++E+M G
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG------------------ 386
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
+P+ TYT +I + G D+A+ + K+M G P+ ++ +
Sbjct: 387 -----------CMPD----VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 469 LLAGLEKLGRVSDAE 483
+L GL GR DAE
Sbjct: 432 VLKGLCSAGRWVDAE 446
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 136/341 (39%), Gaps = 44/341 (12%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+PPN YT+ ++ L G+ +ALE+ +M G P ++++E C++G R +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 227 LILRYMKENRLAL---RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+L M L + A+ DE LL ++ F + D V +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL-----AFFGCEADIVSYN- 220
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA----VISTIIEVNCDHR 339
++ +GL + K ++ L MD+ +++D A +T+I C +
Sbjct: 221 -------AVLKGLCM----AKRWGDVEEL----MDEMVRVDCAPNIVTFNTLIGYLCRNG 265
Query: 340 --RRDGALLA--FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R +LA E+ D+ + Y +I + K EI+ M G V
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRM----YATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTALIGVYFSAGSADKALKI 450
++ L SA R A ++ S + P D T+ L+ + G D+ +++
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD---VTFNILVDFFCQNGLVDRVIEL 378
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ M G P + T+ ++ G K G + +A + K S
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/478 (19%), Positives = 177/478 (37%), Gaps = 56/478 (11%)
Query: 15 STWDSAQD-LLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
S+W+ + ++NL V VL++ A FF W R + HD Y +ML
Sbjct: 155 SSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSML 214
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
++ + K + V LM+ +GI ++ VM S AG + A+ + M+
Sbjct: 215 EVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVE 274
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P ++ + + +R+++A + M G+ PN TY ++ + EEA+E+
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-KENRLALRYPVFKEALQTFK 252
M G PDK + ++ CK + +++ M KE+ L + +
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
D D LW F+ D
Sbjct: 395 KHDHADEALW---------FLKD------------------------------------- 408
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+K ++D S I+ C R A + +MD + Y A++ +
Sbjct: 409 ---AQEKGFRIDKLGYSAIVHALCKEGRMSEAK---DLINEMDCPPDVVTYTAVVNGFCR 462
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTAT 430
L K ++++ M GH L++ + + + A ++ ++ E + T
Sbjct: 463 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 522
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
Y+ ++ G +A + + M KG P N+LL L + GR +A + +E
Sbjct: 523 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 580
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 25/323 (7%)
Query: 21 QDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
+DL+K + P + T+ +L H ++A L+F ++ +GF D+ Y+ ++
Sbjct: 367 RDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA-LWFLKDAQEKGFRIDKLGYSAIV 425
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ R+S K +L+ E D VTYT+V++ G+VD A + + M
Sbjct: 426 HALCKEGRMSEAK---DLINEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 482
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P VSYTA + + + EA ++ + PN TY+V+M L R GK EA ++
Sbjct: 483 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 542
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
+M G P N+L++ C+ G T + A+ F + F
Sbjct: 543 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 602
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
DE D+ L + + I+ + V TT LV L KK + L+
Sbjct: 603 NDELDAALSVLDDMY---LINKHADVFTYTT-----------LVDTLGKKGRIAEATELM 648
Query: 314 SGIMDKSIQLDSAVISTIIEVNC 336
++ K I T+I C
Sbjct: 649 KKMLHKGIDPTPVTYRTVIHRYC 671
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 171/424 (40%), Gaps = 26/424 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM-QEKGINIDAVTYTSVMHWLSNAGDV 117
S+G D+ +Y T++ + KRI ++ + + M +E G+ D VTY +++H L+
Sbjct: 340 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ ++ + K + Y+A + L R+ EA D+ EM PP+ TYT +
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAV 456
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN-- 235
+ R G+ ++A ++ M G +P+ + L+ C+ G++ ++ +E+
Sbjct: 457 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 516
Query: 236 -RLALRYPVFKEALQT-FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
++ Y V L+ K+++ D + V F P GP+ I+
Sbjct: 517 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP-----------------GPVEIN 559
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L+ L + + ++K ++ +T+I C + D AL +
Sbjct: 560 L-LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 618
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
++ + + Y L+ L K + E++++M G +IHR +
Sbjct: 619 INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDD 678
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
I + QKC Y +I G ++A + + R T L+ G
Sbjct: 679 LVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY 738
Query: 474 EKLG 477
K G
Sbjct: 739 LKKG 742
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + D +TY T++ RI K +F M EK VTYTS+++ L + +VD
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ EEMK K P + +Y++ M L + R +A ++++ M+ RG PN TYT L+
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII-----LILRYMKE 234
L + K +EA+E+ +M G++PD +I C + R +IL +
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Query: 235 NRL 237
NRL
Sbjct: 366 NRL 368
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F M ++G + D+ TY +++ L G +D A ++ EM K+C PT+V+YT+ + L
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ V EA +EM +G+ PN +TY+ LM+ L + G+ +A+E+F M G +P+
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE------ALQTFKVA----DE- 256
LI CK + + + +L M L ++ + A+ F+ A DE
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 257 ------NDSLLWQVHPQFSPEFI 273
+ L W +H + S E +
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVV 381
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT++++ +K + E M+ KGI + TY+S+M L G A+ ++E M
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM 288
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P +V+YT + L +++EA ++ M +GL P+ Y ++ K+
Sbjct: 289 MARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKF 348
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE 214
EA +M G+ P++ NI ++
Sbjct: 349 REAANFLDEMILGGITPNRLTWNIHVK 375
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVL-------KTHPPMEKAWLFFNWVSRSR 60
V +++ + + +A+DL+ + I+ + + +L + H P + +F + +
Sbjct: 58 VLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF----HKMK 113
Query: 61 GFNHD--RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS-NAGDV 117
F+ D + Y T+L I E +++ ++ M+E G+ + ++ L N G V
Sbjct: 114 DFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTV 173
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D + I+ EM + C P +Y + L R+ EA ++ EM+++ P TYT L
Sbjct: 174 DAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSL 233
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ L + +EA+ +M+ G++P+ + L++ CK G +
Sbjct: 234 INGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G + FTY++++D + R +FE+M +G + VTYT+++ L +
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV + + M L+ P Y + + +EA + EMI G+ PN T+ +
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 373
Query: 178 MEY---LVR---AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ +VR A A ++ M+ G+ + L++ CK GE
Sbjct: 374 VKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGE 423
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+G R VF M++ + Y +V+ L ++ A ++ M+ PT
Sbjct: 96 YGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPT 155
Query: 136 IVSYTAYMKILFLND-RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+ S +K L ND V ++ EM +RG P+ YTY L+ L R G+ +EA ++F
Sbjct: 156 VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++M E P LI C ++ + +RY++E
Sbjct: 216 TEMVEKDCAPTVVTYTSLINGLCG---SKNVDEAMRYLEE 252
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 346 LAFEYSVKM-DLNLERTAYLALIGILIKL-----NTFPKVAEIVEEMTKAGHSLGVYLGA 399
LAF++ M ++ L T +A + +LIK T +I EM K G Y
Sbjct: 139 LAFKFYKNMREIGLPPT--VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYG 196
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCR 456
LI L R A K+F+ + E + C TYT+LI + + D+A++ + M
Sbjct: 197 TLISGLCRFGRIDEAKKLFTEMVE-KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255
Query: 457 KGIHPSLGTFNVLLAGLEKLGR 478
KGI P++ T++ L+ GL K GR
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGR 277
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDA 501
G+ D LKI+ M ++G P T+ L++GL + GR+ +A K + + + KD
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEA-------KKLFTEMVEKDC 223
Query: 502 VP 503
P
Sbjct: 224 AP 225
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N D Y T+ G K+IS + ++E M+ G D TY ++ AG V
Sbjct: 278 KGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYE 337
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+EE++ +C P I+SY + + L N + EA ++EM ++GL P+ TY+ L+E
Sbjct: 338 AIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIE 397
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ K E A +F +M G P+ NIL++ ++G T + + +K+ L
Sbjct: 398 CFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 457
Query: 238 -ALRYPVFKEALQT-----FKVADENDSLLWQVHP 266
++ Y V E LQ+ +V +N W V P
Sbjct: 458 DSITYSVL-ERLQSGSHRKLRVRRKNPITGWVVSP 491
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 187/435 (42%), Gaps = 36/435 (8%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+TY ++ + + + V+ M+ KG +D + ++ L+ VD A ++E+
Sbjct: 43 YTYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFED 102
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK K C P +YT +++ ++ E+ +++EM+ +G PN Y +++ L +
Sbjct: 103 MKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRM 162
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE----TRTIILILRYMKENRLALRYP 242
++ + +FSKM E +P++ ++++ G+ + + L +YM NR Y
Sbjct: 163 VDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHKLDKVVELSRKYM--NRSIYAYL 220
Query: 243 VFKEALQTFKVADENDSL---LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
V L A E L +W H + D DA LS+ + L
Sbjct: 221 V--RTLNKLGHASEAHRLFCNMWSYHDR------GDRDAC----------LSMLESLC-- 260
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K + AID LL I +K I D+ + +T+ ++ L +K+D L
Sbjct: 261 -NAGKTVEAID-LLGKIHEKGINTDTIMYNTVFTA-LGRLKQISHLYDLYEKMKLDGPLP 317
Query: 360 RT-AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y LI + + +I EE+ + + LI+ LG A F
Sbjct: 318 DIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRF 377
Query: 419 SLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ E TY+ LI + + A +++ M +G P++ T+N+LL LE+
Sbjct: 378 REMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERS 437
Query: 477 GRVSDA-EIYRKEKK 490
GR ++A ++Y K K+
Sbjct: 438 GRTAEAVDLYAKLKQ 452
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 178/419 (42%), Gaps = 26/419 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T ++ FG+ + ++ L+++ + ++ TY ++ + D D ++ EM
Sbjct: 12 TVNILIGFFGDGE---DLERCIGLIEKWDLKMNGYTYKCLVQAYLRSCDSDNGFRVYLEM 68
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K I ++ + L + +V +A V+++M ++ P+ YTYT+++ R GK
Sbjct: 69 KRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKL 128
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET-RTIILILRYMKENRLALRYPVFKE 246
+E+L +F +M G P+ A N +I+ + +TI+L + M++N R F
Sbjct: 129 DESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKN---CRPNEFTY 185
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
++ +A E Q+H + VE + SI LV L K +
Sbjct: 186 SVILTLLAAEG-----QLHKL--------DKVVELSRKYMN--RSIYAYLVRTLNKLGHA 230
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
L + + D +++E C+ + A+ + +N + Y +
Sbjct: 231 SEAHRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTV 290
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
L +L + ++ E+M G ++ +LI G A + A KIF L E+
Sbjct: 291 FTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEEL-ENSD 349
Query: 427 CTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
C +Y +LI G D+A ++ M KG++P + T++ L+ K +V A
Sbjct: 350 CKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMA 408
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G+ D F + +LD + +++ VFE M++K D TYT ++ G +
Sbjct: 69 KRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKL 128
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D ++ ++EEM K C P +++Y ++ L + V + ++ +M+++ PN +TY+V+
Sbjct: 129 DESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVI 188
Query: 178 ME----------------------------YLVRA----GKYEEALEIFSKMQEAGVQPD 205
+ YLVR G EA +F M + D
Sbjct: 189 LTLLAAEGQLHKLDKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGD 248
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKE 234
+ AC ++E C AG+T I +L + E
Sbjct: 249 RDACLSMLESLCNAGKTVEAIDLLGKIHE 277
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 46/83 (55%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G N D TY+T+++ FG+ ++ +F+ M +G + VTY ++ L +G
Sbjct: 381 QEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRT 440
Query: 118 DGAVNIWEEMKLKECYPTIVSYT 140
AV+++ ++K + P ++Y+
Sbjct: 441 AEAVDLYAKLKQQGLTPDSITYS 463
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ +L H ++A F ++ RGF D+ Y+ ++D + + R+ K + M
Sbjct: 263 TLIHMLCKHQHADEALQFLRE-AQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+G D VTYT++++ S AG+V A + ++M C P VSYTA++K L E
Sbjct: 322 RGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSE 381
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A ++ K ++ PN TY+V+M R GK +A ++ +M G P N+L++
Sbjct: 382 AREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQ 441
Query: 215 KCCKAG 220
C+ G
Sbjct: 442 SLCRIG 447
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 167/445 (37%), Gaps = 63/445 (14%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FF W R + HD Y MLD+ + K + V LM +GI + VM
Sbjct: 69 FFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSY 128
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
S AG + A+ + M+ P ++ + +L + + +++A + M G+ PN
Sbjct: 129 SRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNV 188
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
TY L++ + E+A+E+ S+M G PDK + ++ CK R ++ ++
Sbjct: 189 VTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEK 248
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
M++ +L D V + T
Sbjct: 249 MEDTKLL-------------------------------------ADQVTYNT-------- 263
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
L+ +L K ++ L + Q+D S I++ C R D A
Sbjct: 264 ----LIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEM 319
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH-----SLGVYLGALLIHRLG 406
+ Y A+I + + +++++M K G S +L L
Sbjct: 320 FTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNS 379
Query: 407 SARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
S R + A E+Q T TY+ ++ + G A + + M KG P+
Sbjct: 380 SEAREMMKA------SEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTP 433
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKE 488
N+LL L ++GRV +A+ + +E
Sbjct: 434 VEINLLLQSLCRIGRVDEAKKFMEE 458
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+GF +L R+ K E G ++AV +T+V+H D++
Sbjct: 426 GKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIE 485
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+++ ++M L +P V+YT + L R++EAT++ +M+++G+ P TY ++
Sbjct: 486 AALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVI 545
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ G+ E+ L + KM Q + A N +IEK C G
Sbjct: 546 HRYGQIGRVEDLLNLLDKMLTR--QECRTAFNQVIEKLCTFG 585
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 182/466 (39%), Gaps = 26/466 (5%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T VL +EKA F + + G + TY ++ + + R+ + M
Sbjct: 158 TAIHVLVMANMLEKALRFLERM-QLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPL 216
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
KG + D V+Y +VM +L + +++ E+M+ + V+Y + +L + E
Sbjct: 217 KGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADE 276
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A +E +RG + Y+ +++ + G+ ++A EI ++M G PD +I
Sbjct: 277 ALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIIN 336
Query: 215 KCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSP 270
+AGE +L+ M ++ + Y F + L + E ++ Q ++P
Sbjct: 337 GFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTP 396
Query: 271 EFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL---VAIDSLLSGI----------- 316
I+ + + EG LS +V ++ K V I+ LL +
Sbjct: 397 NAITYSVVMHGFRR--EGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKK 454
Query: 317 -MDKSIQLDSAV----ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
M++ + + AV +T+I C + AL + + + + Y +I L
Sbjct: 455 FMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALG 514
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATY 431
K + E+ +M K G +IHR G R + + Q+C +
Sbjct: 515 KKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAF 574
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+I + G+ + A K+ + R T +VL+ + G
Sbjct: 575 NQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKG 620
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 105/266 (39%), Gaps = 19/266 (7%)
Query: 2 RDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRG 61
R + +YK S LK L K +S +++K E+ W W +
Sbjct: 348 RKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKAS---EEQW----WTPNA-- 398
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
TY+ ++ F ++S V M KG V ++ L G VD A
Sbjct: 399 -----ITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAK 453
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
EE C V++T + D ++ A + +M P+ TYT +++ L
Sbjct: 454 KFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDAL 513
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM---KENRLA 238
+ G+ EEA E+ KM + G+ P +I + + G ++ +L M +E R A
Sbjct: 514 GKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTA 573
Query: 239 LRYPVFKEALQTFKVADENDSLLWQV 264
+ E L TF + D LL +V
Sbjct: 574 FNQVI--EKLCTFGNLEAADKLLGKV 597
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TYTT++D G+ RI + M +KGI+ VTY +V+H G V+ +N+
Sbjct: 502 DAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLL 561
Query: 125 EEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
++M +EC ++ ++ L ++ A + ++++ + T VLME +R
Sbjct: 562 DKMLTRQECR---TAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLR 618
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI-ILILRYMKENRLA 238
G A ++ +M + PD C + +K + G++ L LR+++ ++
Sbjct: 619 KGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNIS 674
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 182/425 (42%), Gaps = 24/425 (5%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ ++Y+T++D F ++ V+ M GI + VT+ S++ L G + A+++W
Sbjct: 393 ESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVW 452
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M + P VSY + +LF A ++ +++ RG + Y + ++ +
Sbjct: 453 HLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKM 512
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN----RLALR 240
K EA E F++M+E G +PD LI+ CK G + M++ + L
Sbjct: 513 EKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELY 572
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ ++ K + D L SP ++ T I G D+G +
Sbjct: 573 NSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVT-------YGTLIAG--WCDEGRL--- 620
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K A ++ ++ + S ++S++ + R D A + + V +D+ L+
Sbjct: 621 --DKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLG----RIDEANMLLQKMVNLDVFLDH 674
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS- 419
+ L K+A+ ++E +K+ + + I L + + A KIFS
Sbjct: 675 GYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSS 734
Query: 420 -LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
LL TY LI Y +AG+ + A + M ++G+ P++ T+N L+ GL K G
Sbjct: 735 LLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGN 794
Query: 479 VSDAE 483
+ A+
Sbjct: 795 LDRAQ 799
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 175/444 (39%), Gaps = 61/444 (13%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG+ + + TM++ F + +++ + F M+E G D VTY +++ G+V+
Sbjct: 492 ARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVE 551
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + E+M+ + P+I Y + + LF + + +E D+ EM +GL PN TY L+
Sbjct: 552 EAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLI 611
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G+ ++A + M E G P+ C+ ++ + G ++L+ M +
Sbjct: 612 AGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVF 671
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
L + F + K D N + I+D ++D+
Sbjct: 672 LDHGYFD---RLHKADDGN----------LDSQKIAD---------------TLDES--- 700
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI-IEVNCDHRRRDGALLAFEYSVKMDLN 357
KS L ++V+ I I C + D A F + +
Sbjct: 701 -------------------SKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS 741
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ Y LI + +EM K G + + LI+ L + A K+
Sbjct: 742 PDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKL 801
Query: 418 F------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
F L P +Y LI Y G+ +AL + M ++GI PSL T++ L+
Sbjct: 802 FDKLHLKGLAPN----VISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIY 857
Query: 472 GLEKLGRVSDAEIYRKEKKSIQAD 495
G K G + A E + + AD
Sbjct: 858 GFCKQGDMGKATNLLDEMRELFAD 881
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF+ D FTY T++ + A ++ + + M ++G+ + +TY ++++ L +G++D
Sbjct: 738 RGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDR 797
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++++ LK P ++SY + N +EA D+ +M++ G+ P+ TY+ L+
Sbjct: 798 AQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIY 857
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ G +A + +M+E + A L+E K GE + I
Sbjct: 858 GFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKI 903
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/486 (20%), Positives = 190/486 (39%), Gaps = 33/486 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A + RS G D + Y ++D + ++ + + M G+ ++
Sbjct: 304 LEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICN 363
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++ G V A + M + P SY+ M V +A VY EM++
Sbjct: 364 ALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRV 423
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ N T+ L++ L R G +E+AL ++ M + GV PD+ + L++ K GE
Sbjct: 424 GIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRA 483
Query: 226 ILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+ + + F + F K+ + ++ F P+ ++ ++
Sbjct: 484 LALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDG 543
Query: 282 VTT--DIEGPLSIDQ---------------GLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
++E + + L+ L K K + LLS + K + +
Sbjct: 544 YCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPN 603
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
T+I CD R D A A+ ++ ++ L +L + +++
Sbjct: 604 VVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQ 663
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRP-VPAAKIFSLLPEDQKC-----TATYTALIGVY 438
+M +L V+L RL A + + KI L E K + Y I
Sbjct: 664 KMV----NLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGL 719
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADA 496
+G D A KI+ ++ +G P T+ L+ G G V+DA R E K+ + +
Sbjct: 720 CKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNI 779
Query: 497 LSKDAV 502
++ +A+
Sbjct: 780 ITYNAL 785
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 184/450 (40%), Gaps = 31/450 (6%)
Query: 55 WVSRSRGFNHDRFTYTT---MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
W R F +F+ T +L I+ E I + +VF+ M + G + ++ L
Sbjct: 134 WNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSL 193
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G+ A+ +++ + P + + + + + V A D KEM G N
Sbjct: 194 VRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNV 253
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
TY L++ V G E A + M E G+ +K +LI+ C+ + +LR
Sbjct: 254 VTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLRE 313
Query: 232 MKENRLAL----RYPVFKEAL-------QTFKVADENDSLLWQVHPQFSPEFISD---ND 277
M+ + + Y V + ++ DE ++ +++ I+ N
Sbjct: 314 MERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNG 373
Query: 278 AV--------EFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAV 327
V V D+E P S ++ ++ LV AI S+ + ++ IQ +
Sbjct: 374 QVSEAERLLMRMVDWDLE-PESYSYSTLMDGFCREGLVTKAI-SVYNEMLRVGIQSNVVT 431
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++++ C + AL + +K + + +Y L+ +L K+ F + + ++
Sbjct: 432 HNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDIL 491
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSAD 445
G+ Y +I+ + + A + F+ + E + TY LI Y G+ +
Sbjct: 492 ARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVE 551
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+A K+ + M ++ I PS+ +N L+ GL K
Sbjct: 552 EAFKVKEKMEKEAILPSIELYNSLIGGLFK 581
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
AW FF+ + + G D TYT+M+ + +A R+ +FE +++ Y +++
Sbjct: 257 AWKFFHEIE-ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+AG D A ++ E + K P++++Y + L +V EA V++EM ++
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAA 374
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
PN TY +L++ L RAGK + A E+ MQ+AG+ P+ NI++++ CK+
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 170/419 (40%), Gaps = 28/419 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ +++D G+ R+ V+E M + +++ YTS++ N G + I+
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M + C P + YM +F ++ +++E+ R P+ +Y++L+ L++A
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G E E+F M+E G D A NI+I+ CK G+ +L MK +
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS-IDQGLVLI--LL 301
+ D D + + + + I N + D G + ID+ +++ L+
Sbjct: 626 GSVIDGLAKIDRLDE-AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 302 KK---KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+K NL +SLL ++ E+N AL+ F+ ++
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAE------------EIN-------EALVCFQSMKELKCTP 725
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ Y LI L K+ F K +EM K G +I L A A +F
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 419 SLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ +A Y A+I + A A +++ R+G+ T VLL L K
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 176/441 (39%), Gaps = 66/441 (14%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M+KA LF N T M+D +++++ +FE M K D +T+
Sbjct: 403 MQKAGLFPNVR-----------TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L G VD A ++E+M +C + YT+ +K F + R ++ +YK+MI +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
P+ M+ + +AG+ E+ +F +++ PD + +ILI KAG
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 226 ILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
+ MKE L + + F K N + +Q+ +E + T
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA--YQL--------------LEEMKT 615
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
P + G V+ L ID L D A
Sbjct: 616 KGFEPTVVTYGSVI-----DGLAKIDRL-----------------------------DEA 641
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
+ FE + + L Y +LI K+ + I+EE+ + G + +Y L+
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 405 LGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L A A F + E KCT TY LI +KA ++ M ++G+ P
Sbjct: 702 LVKAEEINEALVCFQSMKE-LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 462 SLGTFNVLLAGLEKLGRVSDA 482
S ++ +++GL K G +++A
Sbjct: 761 STISYTTMISGLAKAGNIAEA 781
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 2/186 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S ++ ++K E LF++ + +G D Y ++D F + +++ + E M
Sbjct: 556 SILIHGLIKAGFANETYELFYSM--KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ KG VTY SV+ L+ +D A ++EE K K +V Y++ + R+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EA + +E++Q+GL PN YT+ L++ LV+A + EAL F M+E P++ IL
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 213 IEKCCK 218
I CK
Sbjct: 734 INGLCK 739
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/447 (19%), Positives = 179/447 (40%), Gaps = 26/447 (5%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+TT++ F + R+ S + + M+ ++ D V Y + G VD A + E++
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P V+YT+ + +L +R+ EA ++++ + + P Y Y ++ AGK++
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA + + + G P A N ++ K G+ + + MK++ A + +
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNLSTYNILI 384
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
A + D+ + V + + +D+ + +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 309 ID-----SLLSGI----------------MDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
D SL+ G+ +D + +S V +++I+ +H R++
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
++ + + + + + + K K + EE+ ++LIH L
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 408 ARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
A ++F + E Q C T Y +I + G +KA ++ + M KG P++
Sbjct: 565 AGFANETYELFYSMKE-QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKEKKS 491
T+ ++ GL K+ R+ +A + +E KS
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 152/363 (41%), Gaps = 31/363 (8%)
Query: 39 VLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
+ K P EK F + ++R F D +Y+ ++ +A + +F M+E+G
Sbjct: 527 MFKAGEP-EKGRAMFEEI-KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
+D Y V+ G V+ A + EEMK K PT+V+Y + + L DR+ EA +
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
++E + + N Y+ L++ + G+ +EA I ++ + G+ P+ N L++ K
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 219 AGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDS-LLWQVHPQ--FSPEF 272
A E ++ + MKE + + Y + L KV N + + WQ + P
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGL--CKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
IS TT I G L K N+ +L DSA + +I
Sbjct: 763 IS-------YTTMISG-----------LAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK---VAEIVEEMTKA 389
E + R A FE + + L + + L+ L K + + V ++ E KA
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKA 864
Query: 390 GHS 392
H+
Sbjct: 865 RHA 867
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 110/544 (20%), Positives = 201/544 (36%), Gaps = 68/544 (12%)
Query: 2 RDTISNVYKILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
R T++++ +L+ W SA++ L L K V VL+ + +A +F W R
Sbjct: 33 RQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRT 92
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVT----------------- 103
H +Y ++L + + ++ + M G T
Sbjct: 93 ELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREG 152
Query: 104 ------------------YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
YT+++ S D + ++++M+ PT+ +T ++
Sbjct: 153 YDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG 212
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
RV A + EM L + Y V ++ + GK + A + F +++ G++PD
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA---DENDSLLW 262
+ +I CKA + + ++++NR + + + A DE SLL
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 263 QVHPQFS-PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI--MDK 319
+ + S P I+ N +L L+K + +D L M K
Sbjct: 333 RQRAKGSIPSVIAYN-------------------CILTCLRK--MGKVDEALKVFEEMKK 371
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+ + + +I++ C + D A + K L ++ L K +
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKCTA-TYTALIGV 437
+ EEM + LI LG R A K++ +L D + + YT+LI
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADAL 497
+F+ G + KIYK M + P L N + + K G + E R + I+A
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG---EPEKGRAMFEEIKARRF 548
Query: 498 SKDA 501
DA
Sbjct: 549 VPDA 552
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D FT+++++D + KR F M E GIN +AV Y ++ L GDV +
Sbjct: 494 GLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARS 553
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + M+ + P SY A ++I ++V++A ++ M + GL P+ YTY+ +E
Sbjct: 554 VKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEA 613
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
L +G+ EEA ++F M+ G PD CN++I+
Sbjct: 614 LSESGRLEEAKKMFYSMEANGCSPDSYICNLIIK 647
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + F+Y +++ F AK + + F MQ +G+ + VT+ ++++ G +D
Sbjct: 422 SDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAID 481
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + E + P I ++++ + L R +EA + + EMI+ G+ PN Y +L+
Sbjct: 482 KARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILI 541
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL- 237
L G ++++ +MQ+ G+ PD + N LI+ C+ + + M + L
Sbjct: 542 RSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLN 601
Query: 238 --ALRYPVFKEAL 248
Y F EAL
Sbjct: 602 PDNYTYSAFIEAL 614
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/472 (18%), Positives = 196/472 (41%), Gaps = 36/472 (7%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++D ++ I F+ M D TY +++H + G VD A+ + +MK
Sbjct: 182 YNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMK 241
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K +P + +YT ++ + RV EA V++ M G+ PN T L+ + R
Sbjct: 242 DKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPS 301
Query: 189 EALEIFSKMQEAGVQPDKA----ACNILIEKCCKAGETRTIILILR-------YMKENRL 237
+ALE+ S+ + + ++ AC+ ++ + +++ LR Y N +
Sbjct: 302 KALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSV 361
Query: 238 -------ALRYPVFKEALQTFKVADEN------DSLLWQVHPQFSPEFISDNDAV--EFV 282
++ +E F++ + + L + + E+ + D V + +
Sbjct: 362 FNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLI 421
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
+ + + ++ + K + + + + + +T+I +C D
Sbjct: 422 SDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAID 481
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A E ++ L + + +++ L ++ + E EM + G + + +LI
Sbjct: 482 KARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILI 541
Query: 403 HRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
L + + K+ + ++ T +Y ALI ++ +KA K++ +M R G++
Sbjct: 542 RSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLN 601
Query: 461 PSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLL 512
P T++ + L + GR+ +A +K S++A+ S D+ IC+L+
Sbjct: 602 PDNYTYSAFIEALSESGRLEEA---KKMFYSMEANGCSPDSY-----ICNLI 645
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 94/194 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G Y ++++ + + V+ + G+ + +Y +++ A +
Sbjct: 386 RKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLM 445
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + +M+++ P +V++ + + + +A + + +++ GL P+ +T++ +
Sbjct: 446 DNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSI 505
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L + + EEALE F++M E G+ P+ NILI C G+ + +LR M++ +
Sbjct: 506 VDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGI 565
Query: 238 ALRYPVFKEALQTF 251
+ + +Q F
Sbjct: 566 SPDTYSYNALIQIF 579
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G + D ++Y ++ IF ++ K +F+ M G+N D TY++ + LS +G +
Sbjct: 561 QKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRL 620
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
+ A ++ M+ C P +KIL + V+EA ++ + Q+G+ N
Sbjct: 621 EEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLN 673
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ GF +L +G + +VF + G++ Y +++ L + +
Sbjct: 136 RNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSI 195
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A +++M C +Y + + V EA + ++M +G PN +TYT+L
Sbjct: 196 DLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTML 255
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+E A + +EA +F M+++GV P++A L+
Sbjct: 256 IEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVH 292
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 15/195 (7%)
Query: 18 DSAQDLLKNL---PIKWDSYTVN-------QVLKTHPPMEKAWLFFNWVSRSRGFNHDRF 67
D A+ LL++L +K D +T + Q+ +T +E W G N +
Sbjct: 481 DKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEW-----GINPNAV 535
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y ++ ++ + MQ++GI+ D +Y +++ V+ A +++ M
Sbjct: 536 IYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSM 595
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P +Y+A+++ L + R++EA ++ M G P+ Y ++++ LV+
Sbjct: 596 SRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYV 655
Query: 188 EEALEIFSKMQEAGV 202
EEA I + ++ G+
Sbjct: 656 EEAQNIIERCRQKGI 670
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+ D +T N ++ H ++KA F +SR RG TYT+++ + ++
Sbjct: 323 LALDVFTYNILINGHCKEGNVKKALEIFENMSR-RGVRATVVTYTSLIYALSKKGQVQET 381
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+F+ +GI D V Y ++++ S +G++D A I EM+ K P V+Y M+
Sbjct: 382 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 441
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L L RV EA + EM +RG+ P+ TY L+ G ++AL I ++M G P
Sbjct: 442 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKEN 235
N LI+ CK G+ +++ M EN
Sbjct: 502 LLTYNALIQGLCKNGQGDDAENMVKEMVEN 531
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 165/399 (41%), Gaps = 38/399 (9%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
T+ ++ L +AG A+ + +M P V+Y + RV+ A D+ +E
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 210
Query: 162 MIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKA 219
M +RG + PN YTY ++ + G+ +EA+++F +M G V+P+ N LI C
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G+ T +L M E +A+ + +LL VH F +A
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATY--------------NLL--VHALFMDG--RGTEAY 312
Query: 280 EFVTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
E V L++D IL+ K+ N+ + + + ++ +++I
Sbjct: 313 ELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL 372
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG- 394
+ F+ +V+ + + Y ALI + EI+ EM K +
Sbjct: 373 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 432
Query: 395 -----VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALK 449
+ G L+ R+ AR+ + + P+ TY LI Y G AL+
Sbjct: 433 VTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD----LVTYNTLISGYSMKGDVKDALR 488
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
I M KG +P+L T+N L+ GL K G+ DAE KE
Sbjct: 489 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 527
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TY ++ R + + E M KG+ +D TY +++ G+V
Sbjct: 286 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKK 345
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+E M + T+V+YT+ + L +V+E ++ E ++RG+ P+ Y L+
Sbjct: 346 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 405
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII 226
+G + A EI +M++ + PD N L+ C G E R +I
Sbjct: 406 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 5/208 (2%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF 76
A +LL+ +P + ++ T N V+ + ++ A + G +++TY T++ +
Sbjct: 173 ALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 231
Query: 77 GEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ R+ VF+ M KG + +AV Y +++ + G +D A+ + M + T
Sbjct: 232 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 291
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ +Y + LF++ R EA ++ +EM +GL + +TY +L+ + G ++ALEIF
Sbjct: 292 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFE 351
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETR 223
M GV+ LI K G+ +
Sbjct: 352 NMSRRGVRATVVTYTSLIYALSKKGQVQ 379
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 10/182 (5%)
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
++ ++ + + +I CD + D ALL + V+ + + Y L+ L +
Sbjct: 253 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 312
Query: 381 EIVEEMTKAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
E+VEEM G +L V+ +LI+ + G+ ++ A +IF + + TYT+LI
Sbjct: 313 ELVEEMGGKGLALDVFTYNILINGHCKEGNVKK---ALEIFENMSRRGVRATVVTYTSLI 369
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQ 493
G + K++ R+GI P L +N L+ G + A EI + EKK I
Sbjct: 370 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 429
Query: 494 AD 495
D
Sbjct: 430 PD 431
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 32 DSYTVNQVLKTHPPMEKA----WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
D +T N ++ H KA LF V + GF D TY ++L F + + +++
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFRELVEK--GFMPDAITYNSLLYAFAKEGNVDKVEH 384
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
E + + G + +TY +++H G +D AV +++EM+ C P V+YT + L
Sbjct: 385 TCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLG 444
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+R+ EA V ++M GL P ++ L+ + G+ +A F M +GV+PD+
Sbjct: 445 KMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRL 504
Query: 208 ACNILIEKCCKAGETRTIILILRYM 232
A ++++ ++G+T ++ + R M
Sbjct: 505 AYLVMLDVFARSGDTEKMLCLYRKM 529
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 195/459 (42%), Gaps = 56/459 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + TY TM+ ++G+ R+ +++ M+ G DAVTYT ++ L + A
Sbjct: 393 GFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEA 452
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ E+M PT+++++A + R +A + + MI G+ P+ Y V+++
Sbjct: 453 GKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDV 512
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
R+G E+ L ++ KM +PD +L+ K + I +++ M E +
Sbjct: 513 FARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDM-ELLCRMN 571
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVE-FVTTD-----------IE 287
+ L + + LL + Q + P+ S + +V T+ I
Sbjct: 572 LGIISTMLIKARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECIC 631
Query: 288 GPLSIDQGLV------LILLKKKNLVAIDSLLSGIM----DKSIQLDSAVISTIIE---- 333
+S Q L+ L+ K+ ++ A + +M D++ L +I+ +IE
Sbjct: 632 EHVSFSQDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPDQNCNLYEYLITCLIEAEFF 691
Query: 334 -----VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE-IVEEMT 387
V CD + + E S ++ Y ++I KL FP+ A ++++
Sbjct: 692 SEACQVFCDMQ-----FIGIEAS--------KSIYESIISTYCKLG-FPETAHRLMDDAL 737
Query: 388 KAGHSLGVY-LGALLIHRLGSARRPVPAAKIFSLLPE----DQKCTATYTALIGVYFSAG 442
++G L + ++I G + A + L + D++ + ALI Y +G
Sbjct: 738 QSGIPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGIDRR---IWNALIHAYAESG 794
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
+KA ++ M + G P++ + N ++ L GR+ +
Sbjct: 795 LYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDE 833
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISS---MKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
RG + D ++ T+++ ++ +++ + +FE+ Q G+ D +TY +++ S + +
Sbjct: 250 RGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQ-SGLRPDVITYNTLISACSQSSN 308
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
++ AV ++E+M EC P + +Y A + + + +EA +++E++++G P+ TY
Sbjct: 309 LEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNS 368
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L+ + G ++ ++ +AG + ++ N +I K G
Sbjct: 369 LLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMG 412
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 163/443 (36%), Gaps = 73/443 (16%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F W++RS +L + G A++ S + VF +G + + ++M +
Sbjct: 177 FEWLARSSAPASR--AVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQ--VFNAMMGVYA 232
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE-------ATDVYKEMIQR 165
+G D A + + M + P +VS+ +N R K A D+ E+ Q
Sbjct: 233 RSGRFDDARQLLDTMHDRGIDPDLVSFNT-----LINARSKSGCLAAGVALDLLFEVRQS 287
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KCCKAGET 222
GL P+ TY L+ ++ E+A+ +F M + +PD N ++ +C KA E
Sbjct: 288 GLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEA 347
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ F+E V F P+ I+ N
Sbjct: 348 ERL------------------FREL----------------VEKGFMPDAITYN------ 367
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRD 342
L+ K+ N+ ++ ++ + + +T+I + R D
Sbjct: 368 ------------SLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLD 415
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A+ ++ M + Y +I L K+N + +++E+MT AG + + LI
Sbjct: 416 LAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALI 475
Query: 403 HRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
R A F + + Y ++ V+ +G +K L +Y+ M
Sbjct: 476 CAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYR 535
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P + VLL L K + + E
Sbjct: 536 PDDDMYQVLLVALAKEDKCEEIE 558
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
R+ + V E +Q+ I T ++ + AGDV + I+ MK P + Y
Sbjct: 830 RLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYR 889
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ + +L ++R ++ + EM G P+ L+ AG ++ +++ + EA
Sbjct: 890 SMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEA 949
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
G++PD+ N LI C++ +L M + L + +K L
Sbjct: 950 GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLL 997
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF D +L+++ A V+ + E G+ D TY +++ + +
Sbjct: 915 GFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEG 974
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM + P + SY + + + ++A +++EM + N Y ++M+
Sbjct: 975 FTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKI 1034
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
AG + +A + + M+E G++P A +IL+ AG+ R +L +K + L
Sbjct: 1035 YRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSL 1091
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 1/188 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E+ + N + + RG +Y ++L +A+ +FE M+ K ++ Y
Sbjct: 972 EEGFTLLNEMGK-RGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHM 1030
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
+M NAG+ A N+ MK PTI + M + +EA +V +
Sbjct: 1031 MMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSS 1090
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L + Y+ + + ++ G Y +M+ GV+PD I +T I
Sbjct: 1091 LEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAI 1150
Query: 227 LILRYMKE 234
L+L+ +++
Sbjct: 1151 LLLKSLQD 1158
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 79/178 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G+ + Y +M+ + R ++ + M+ G D ++++ + AG+
Sbjct: 877 KAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNF 936
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D ++ + P +Y + + + R +E + EM +RGL P +Y L
Sbjct: 937 DRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSL 996
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ +A E+A +IF +M+ Q +++ +++++ AG +L MKE+
Sbjct: 997 LAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKED 1054
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 125/336 (37%), Gaps = 57/336 (16%)
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++A V+ MI+ G P + +M L+ G+ +E + ++Q+ + K+ +L
Sbjct: 797 EKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLL 856
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
++ KAG+ ++ I MK +++ + SLL H +F
Sbjct: 857 LDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMI----------SLLCH-HNRFRD-- 903
Query: 273 ISDNDAVEFVTTDIEGP-----LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
VE + ++EG L+I L+ + N + I++ ++ D
Sbjct: 904 ------VELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDT 957
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T+I + C R + K L + +Y +L+ K + +I EEM
Sbjct: 958 YNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMR 1017
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
+ L + Y ++ +Y +AG+ KA
Sbjct: 1018 SKSYQLN---------------------------------RSIYHMMMKIYRNAGNHSKA 1044
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ M GI P++ T ++L+ G+ +AE
Sbjct: 1045 ENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAE 1080
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 76/193 (39%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F + T +LD F +A + + ++ M+ G + Y S++ L +
Sbjct: 846 FKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVE 905
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EM+ P + A + + T VY+ +++ GL P+ TY L+
Sbjct: 906 LMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMY 965
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
R+ + EE + ++M + G+ P + L+ KA I M+ L
Sbjct: 966 CRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNR 1025
Query: 242 PVFKEALQTFKVA 254
++ ++ ++ A
Sbjct: 1026 SIYHMMMKIYRNA 1038
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 56/144 (38%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS+ + +R Y M+ I+ A S + + +M+E GI T +M AG
Sbjct: 1017 RSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQP 1076
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A N+ +K + + Y+ N T EM + G+ P+ +T
Sbjct: 1077 REAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCF 1136
Query: 178 MEYLVRAGKYEEALEIFSKMQEAG 201
+ + +A+ + +Q+ G
Sbjct: 1137 IRAASLCEQTADAILLLKSLQDCG 1160
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY T++ ++ + R + M ++G+ +Y S++ + A + A
Sbjct: 950 GLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQA 1009
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
I+EEM+ K Y MKI +A ++ M + G+ P T +LM
Sbjct: 1010 DQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTS 1069
Query: 181 LVRAGKYEEALEIFSKMQEAGVQ 203
AG+ EA + + ++ + ++
Sbjct: 1070 YGTAGQPREAENVLNNLKSSSLE 1092
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 124/572 (21%), Positives = 209/572 (36%), Gaps = 94/572 (16%)
Query: 10 KILKYSTWD-SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHD--- 65
+I+K W A+ L+ L +K D V +L+ + FF W + R F HD
Sbjct: 69 RIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCST 128
Query: 66 -------------------------RFTYTT--------MLDIFGEAKRISSMKYVF--- 89
R TY + ++ G AK +S VF
Sbjct: 129 YMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQA 188
Query: 90 ---------------------------------ELMQEKGINIDAVTYTSVMHWLSNAGD 116
E+ E D +TY++++ G
Sbjct: 189 KGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGR 248
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
D A+ +++EMK PT YT + I F +V++A D+++EM + G P YTYT
Sbjct: 249 NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 308
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L++ L +AG+ EEA +++ M G+ PD N L+ K G + + M R
Sbjct: 309 LIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWR 368
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
P K E+ + + +V F + D P +
Sbjct: 369 CT---PTVVSYNTVIKALFESKAPVSEVSSWFDK-----------MKADGVSPSEFTYSI 414
Query: 297 VLILLKKKNLVAIDSLLSGIMD-KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
++ K N V LL MD K A ++I +R + A F+ +
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
N+ Y +I K + ++ EM G VY L+ + A A
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEAN 534
Query: 416 KIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ + E+ CTA ++ ++ + G +A+++++TM GI P T+N LL
Sbjct: 535 SLLRKM-EENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGC 593
Query: 473 LEKLGRVSDAEIYRKE--KKSIQADALSKDAV 502
G +A +E K + DA++ ++
Sbjct: 594 FAHAGMFEEAARLMREMKDKGFEYDAITYSSI 625
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 75/173 (43%), Gaps = 7/173 (4%)
Query: 13 KYSTWDSAQDLLKNLPIKWD--SYTVNQVLKTH----PPMEKAWLFFNWVSRSRGFNHDR 66
K +++A +L K L + S V V+ H + +A FN + +++G D
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM-KNQGSGPDV 514
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+ Y ++ +A ++ + M+E G D ++ +++ + G A+ ++E
Sbjct: 515 YAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFET 574
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
MK P V+Y + +EA + +EM +G + TY+ +++
Sbjct: 575 MKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILD 627
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + D +TY T++ RI K +F M EK VTYTS+++ L + +VD
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ EEMK K P + +Y++ M L + R +A ++++ M+ RG PN TYT L+
Sbjct: 246 AMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII-----LILRYMKE 234
L + K +EA+E+ +M G++PD +I C + R +IL +
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITP 365
Query: 235 NRL 237
NRL
Sbjct: 366 NRL 368
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F M ++G + D+ TY +++ L G +D A ++ EM K+C PT+V+YT+ + L
Sbjct: 179 IFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ V EA +EM +G+ PN +TY+ LM+ L + G+ +A+E+F M G +P+
Sbjct: 239 GSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----------KVADE- 256
LI CK + + + +L M L ++ + + F DE
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEM 358
Query: 257 ------NDSLLWQVHPQFSPEFI 273
+ L W +H + S E +
Sbjct: 359 ILGGITPNRLTWNIHVKTSNEVV 381
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 68 TYTTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TYT++++ +K + +M+YV E M+ KGI + TY+S+M L G A+ ++E
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYV-EEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + C P +V+YT + L +++EA ++ M +GL P+ Y ++ K
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSK 347
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIE 214
+ EA +M G+ P++ NI ++
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVK 375
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + FTY++++D + R +FE+M +G + VTYT+++ L +
Sbjct: 254 KGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV + + M L+ P Y + + +EA + EMI G+ PN T+ +
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIH 373
Query: 178 MEY---LVRA---GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++ +VR A ++ M+ G+ + + L++ CK GE
Sbjct: 374 VKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGE 423
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 346 LAFEYSVKM-DLNLERTAYLALIGILIKL-----NTFPKVAEIVEEMTKAGHSLGVYLGA 399
LAF++ M ++ L T +A + +LIK T +I EM K G Y
Sbjct: 139 LAFKFYKNMREIGLPPT--VASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYG 196
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCR 456
LI L R A K+F+ + E + C TYT+LI + + D+A++ + M
Sbjct: 197 TLISGLCRFGRIDEAKKLFTEMVE-KDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKG 255
Query: 457 KGIHPSLGTFNVLLAGLEKLGR 478
KGI P++ T++ L+ GL K GR
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGR 277
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDA 501
G+ D LKI+ M ++G P T+ L++GL + GR+ +A K + + + KD
Sbjct: 171 GTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEA-------KKLFTEMVEKDC 223
Query: 502 VP 503
P
Sbjct: 224 AP 225
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 192/473 (40%), Gaps = 26/473 (5%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E Y LI K + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAV 346
Query: 381 EIVEEMT------KAGHSLGVYLGAL--LIHRLGSARRPVPAAKIFSLLPE--DQKCTAT 430
++++++ + +L + A +I L + + A + L + Q TA
Sbjct: 347 KLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQXXKAETLVRQLXKLGVQDPTAL 406
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 407 NTLIRG-HSQEGSPDSAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDAK 458
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 8/334 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G +L+ M +
Sbjct: 263 PGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSV 322
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ ++ F + D + + + I + + P ++
Sbjct: 323 PTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP------MI 376
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L ++L+ + +Q D ++T+I + D A + ++ +B
Sbjct: 377 EYLCNNGQXXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVB 435
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
E++AY +L+ +K N ++ M + H
Sbjct: 436 SEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDH 469
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 179/445 (40%), Gaps = 55/445 (12%)
Query: 47 EKAWLFFNWVSRSRG-FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
EKAW FN ++G D +++ M+ E + V M+E G++ + V YT
Sbjct: 134 EKAWRVFN---ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYT 190
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ GD++ ++ +M + +YT + F K+ ++Y++M
Sbjct: 191 TLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLT 250
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN YTY ++ GK A E+F +M+E GV + N LI C+
Sbjct: 251 GIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQE------ 304
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
R ++ RL R + D L SP IS N T
Sbjct: 305 ---RRVLEAERLMCRM--------------KRDGL--------SPNLISYN-------TL 332
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I+G SI NL SL + + A + +I + + G
Sbjct: 333 IDGYCSIG-----------NLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVT 381
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
L+ + Y L+ L++ + K +I M KAG +Y+ +LIH L
Sbjct: 382 DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 441
Query: 406 GSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A+K+F L E + Y +I Y GS+ +AL++ K M G+ P++
Sbjct: 442 CVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNV 501
Query: 464 GTFNVLLAGLEKLGRVSDAEIYRKE 488
++N + L K + ++AE+ K+
Sbjct: 502 ASYNSTIXILCKDEKWTEAEVLLKD 526
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FN + +S G + TY ++ F EAK + + + M+ +G++ VTYT
Sbjct: 342 LDKASSLFNQM-KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 400
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+M L + +++ A I+ M+ I Y + L + +KEA+ ++K + +
Sbjct: 401 ILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEM 460
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
L PN Y ++ + G AL + +M E G+ P+ A+ N I CK
Sbjct: 461 HLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCK 513
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+RG + + TYT ++D + I ++ M++ G+ D Y ++H L GD+
Sbjct: 389 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 448
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + P V Y + A + KEM + G+ PN +Y +
Sbjct: 449 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 508
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
L + K+ EA + M E G++P + N++
Sbjct: 509 XILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 138/352 (39%), Gaps = 36/352 (10%)
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+MI RGL P T+ L+ L+++ +E+A +F++ + V+ D + I+I+ CC+
Sbjct: 106 NQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETK-GNVKLDVYSFGIMIKGCCEV 164
Query: 220 GETRTIILILRYMKENRLALRYPVF-------------KEALQTFKVADENDSLLWQ-VH 265
G +L M+E L+ V+ + Q F E D + Q +
Sbjct: 165 GYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTY 224
Query: 266 PQFSPEFIS---DNDAVEFVT----TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
F D +E T I + ++ L L + +
Sbjct: 225 TVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRE 284
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM---DLNLERTAYLALIGILIKLNT 375
+ + + +T+I C RR L A +M L+ +Y LI +
Sbjct: 285 RGVACNVVTYNTLIGGLCQERR---VLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGN 341
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK-----CTAT 430
K + + +M +G S + +LI A+ +A + ++ E + T
Sbjct: 342 LDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN---SAGVTDMVREMEARGLSPSKVT 398
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
YT L+ + + +KA +IY +M + G+ + + VL+ GL +G + +A
Sbjct: 399 YTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 450
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 85/147 (57%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M EKG++++ + +T ++ GDV GA ++W EM+ + +P +V+++A++ L
Sbjct: 327 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGL 386
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V+EA +V+ EM+++GL PN + Y L+ + GK EAL++ M+ G+ PD N+
Sbjct: 387 VEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNM 446
Query: 212 LIEKCCKAGETRTIILILRYMKENRLA 238
+I CK G R+ I + M + L+
Sbjct: 447 IIGGLCKQGRMRSAINVFMDMHQTGLS 473
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 174/451 (38%), Gaps = 31/451 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ F Y +++ R S F LM E+G N VT+ +V++ G+V A ++
Sbjct: 90 NAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLF 149
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ +K P + Y M + +A +Y+EM ++G+ P+ T+ +L+ +
Sbjct: 150 DGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKY 209
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ E+ + + G+ PD++ +I + C AG + L M E L+ F
Sbjct: 210 GREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAF 269
Query: 245 KEALQTFKVADENDSLL----WQVHPQFSPE---------FISDN----DAVEFVTTDIE 287
+ + A D VH +P +S N +A E + IE
Sbjct: 270 NSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE 329
Query: 288 GPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
LS++ +LL K+ ++V SL + + I D S I+ +
Sbjct: 330 KGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEE 389
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A F ++ L AY +LI K + ++ + M G ++ ++I
Sbjct: 390 AYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIG 449
Query: 404 RLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L R A +F L P+ TY LI Y A A + M
Sbjct: 450 GLCKQGRMRSAINVFMDMHQTGLSPD----IITYNTLINGYCKAFDMVNADNLVNRMYAS 505
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G +P L T+N+ + G R++ A + E
Sbjct: 506 GSNPDLTTYNIRIHGFCSSRRMNRAVLMLDE 536
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + + +T +LD F + + + ++ M+ +GI D V +++ + LS G V+
Sbjct: 330 KGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEE 389
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N++ EM K P +Y + + ++ EA + K M RGL P+ +T +++
Sbjct: 390 AYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIG 449
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L + G+ A+ +F M + G+ PD N LI CKA
Sbjct: 450 GLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKA 489
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 182/445 (40%), Gaps = 37/445 (8%)
Query: 50 WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMH 109
W F V R RG ++T++ ++ F I + + LM + +A Y V++
Sbjct: 41 WKLFKDVIR-RGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVIN 99
Query: 110 WLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
G A+ + M + C PT+V++ + V EA ++ + + G P
Sbjct: 100 ACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSP 159
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
N Y LM V+ + ++A ++ +M++ G+ PD NIL+ K G +L
Sbjct: 160 NAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLL 219
Query: 230 RYMKENRLALRYPVFKEALQTFKVADENDS----LLWQVHPQFSPEFISDNDAV-EFVTT 284
+ + L +F ++ A D L+ + SP I+ N + +
Sbjct: 220 KDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQA 279
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI-MDKSIQLDSAVISTIIEVNCDHRRRDG 343
+E L++ + SLL G+ ++ +Q + +I +IE +
Sbjct: 280 GLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE-------KGL 332
Query: 344 ALLAFEYSVKMDLNLER---TAYLALIGILIKLNTFPKV---AEIVEEMTKAGHSLGVYL 397
++ ++V +D +R +L G + + FP V + ++ ++K G Y
Sbjct: 333 SVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYN 392
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L + R G L+P + Y +LI + G ++ALK+ K M +
Sbjct: 393 VFLEMLRKG-------------LIPNN----FAYNSLICGFCKCGKLNEALKLEKVMRHR 435
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA 482
G+ P + T N+++ GL K GR+ A
Sbjct: 436 GLLPDIFTTNMIIGGLCKQGRMRSA 460
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D ++ +D + + VF M KG+ + Y S++ G ++
Sbjct: 365 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE 424
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + + M+ + P I + + L R++ A +V+ +M Q GL P+ TY L+
Sbjct: 425 ALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLIN 484
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+A A + ++M +G PD NI I C + +L+L
Sbjct: 485 GYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLML 534
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 134/390 (34%), Gaps = 31/390 (7%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I M+ P+ K+L ++K++I+RG P YT++ ++
Sbjct: 5 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G + M + +P+ A NI+I CC G T + M E
Sbjct: 65 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 124
Query: 240 RYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
F + F V + FSP I N + E IDQ
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMRE----IDQA 180
Query: 296 LVLILLKKKNLVAIDS---------------------LLSGIMDKSIQLDSAVISTIIEV 334
+L +K +A D LL I + D ++ +
Sbjct: 181 NMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSG 240
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C R D A+ ++ L+ A+ ++I + K E + M G +
Sbjct: 241 LCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPS 300
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYK 452
+ L+ L R A ++ + E +T L+ +F G A ++
Sbjct: 301 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 360
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M R+GI P + F+ + GL K G V +A
Sbjct: 361 EMERRGIFPDVVAFSAFIDGLSKQGLVEEA 390
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/150 (18%), Positives = 65/150 (43%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + F Y +++ F + +++ + ++M+ +G+ D T ++ L G +
Sbjct: 400 KGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRS 459
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+N++ +M P I++Y + + A ++ M G P+ TY + +
Sbjct: 460 AINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIH 519
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ + A+ + ++ AG+ AC
Sbjct: 520 GFCSSRRMNRAVLMLDELVSAGILSFSFAC 549
>gi|270342070|gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris]
gi|270342076|gb|ACZ74661.1| hypothetical protein [Phaseolus vulgaris]
Length = 485
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 175/423 (41%), Gaps = 38/423 (8%)
Query: 66 RFTYTTML-DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
RF Y T +++ E R+ G+ +A T+ + H LS GD D
Sbjct: 86 RFNYITQCWEVYAEMGRL-------------GVQRNAYTFNIMTHVLSKDGDTDKVTGFL 132
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+M+ + P +V+Y + R+++A +YK M RG+ PN TYT LM L
Sbjct: 133 EKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEE 192
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
GK +EA ++F +M G+ PD + N L+ C+ GE + IL M NR+ P
Sbjct: 193 GKVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRIC---P-- 247
Query: 245 KEALQTFKVADENDSLLWQV----HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
DS+ +V + + + N E ++ P + LV+ L
Sbjct: 248 -------------DSITCRVIVDGYARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVAL 294
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K+ A S L I + + ++E C+ + AL+ + +
Sbjct: 295 CKEGKPFAARSFLHRISEDGYTPKMNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNA 354
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
AY A+I L ++ + ++EE+ + V + LI + A + L
Sbjct: 355 AAYRAVIICLCRVKRTVEAEVLLEEIIGSDMLPDVEISRALIKGYCEENKVDKAVSLLKL 414
Query: 421 LPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
++ + T +Y A++ V+ G+ + +++ + + G P+ T ++ GL+K
Sbjct: 415 FAKEFQVYDTESYNAVVKVFCDVGNVTELMEVEDKLLKVGYVPNKLTCRHVIHGLQKAME 474
Query: 479 VSD 481
+ D
Sbjct: 475 LDD 477
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/382 (18%), Positives = 167/382 (43%), Gaps = 22/382 (5%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+ W + + R G + +T+ M + + + E M+E+G D VTY ++
Sbjct: 92 QCWEVYAEMGR-LGVQRNAYTFNIMTHVLSKDGDTDKVTGFLEKMEEEGFEPDLVTYNTL 150
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
++ ++ A +++ M ++ P +++YT M L +VKEA ++ +M+ RG+
Sbjct: 151 VNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEEGKVKEAHQLFHQMVHRGI 210
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ +Y L+ R G+ + I +M + PD C ++++ + G+ + +
Sbjct: 211 APDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRICPDSITCRVIVDGYARDGKLLSALN 270
Query: 228 ILRYMKENRLALRYPVF--------KE----ALQTF--KVADENDSLLWQVHPQFSPEFI 273
+ +K R+ + V+ KE A ++F +++++ + + +
Sbjct: 271 TVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTPKMNTYNKLVESLC 330
Query: 274 SDNDAVE--FVTTDIEG-PLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
N+ E + +D+E + ++ + +++ L + K V + LL I+ + D
Sbjct: 331 EFNNEEEALILKSDMENKSMKVNAAAYRAVIICLCRVKRTVEAEVLLEEIIGSDMLPDVE 390
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+ +I+ C+ + D A+ + K + +Y A++ + + ++ E+ +++
Sbjct: 391 ISRALIKGYCEENKVDKAVSLLKLFAKEFQVYDTESYNAVVKVFCDVGNVTELMEVEDKL 450
Query: 387 TKAGHSLGVYLGALLIHRLGSA 408
K G+ +IH L A
Sbjct: 451 LKVGYVPNKLTCRHVIHGLQKA 472
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 128/361 (35%), Gaps = 59/361 (16%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P +++ + L + + + +VY EM + G+ N YT+ ++ L + G ++
Sbjct: 72 PNVIACNCLLSGLSRFNYITQCWEVYAEMGRLGVQRNAYTFNIMTHVLSKDGDTDKVTGF 131
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL-Q 249
KM+E G +PD N L+ CK + + M + + Y L +
Sbjct: 132 LEKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCE 191
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
KV + + VH +P+ +S N LV + +
Sbjct: 192 EGKVKEAHQLFHQMVHRGIAPDIVSYNT------------------LVCGYCRHGEMQMC 233
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
S+L ++ I DS I+ D RDG LL+
Sbjct: 234 RSILYEMIGNRICPDSITCRVIV----DGYARDGKLLS---------------------- 267
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC-- 427
LNT VEE+ + + + L+ L +P A + ED
Sbjct: 268 --ALNT-------VEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTPK 318
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
TY L+ + ++AL + M K + + + ++ L ++ R +AE+ +
Sbjct: 319 MNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAVIICLCRVKRTVEAEVLLE 378
Query: 488 E 488
E
Sbjct: 379 E 379
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 2/143 (1%)
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
+ AL F +++ L A L+ L + N + E+ EM + G Y ++
Sbjct: 56 EKALETFRRNIETRLIPNVIACNCLLSGLSRFNYITQCWEVYAEMGRLGVQRNAYTFNIM 115
Query: 402 IHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
H L + E+ + TY L+ Y + A +YK M +G+
Sbjct: 116 THVLSKDGDTDKVTGFLEKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGV 175
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA 482
P+L T+ L+ GL + G+V +A
Sbjct: 176 MPNLITYTTLMNGLCEEGKVKEA 198
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 183/432 (42%), Gaps = 32/432 (7%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
F + +L + K S++ + + M GI D T T V++ + VD A+++ +
Sbjct: 57 FEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAK 116
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+ P ++T ++ L + ++ EA DV+ +M+ G PN TY LM L + +
Sbjct: 117 ILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQ 176
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPV 243
EAL +FS+M G+ PD N LI C E + + +L M ++++ + +
Sbjct: 177 LTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNI 236
Query: 244 FKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+AL + KV + +D + + P+ ++ ++ E +D+ + + +
Sbjct: 237 VVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSE----MDEAVKVFDMM 292
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+N G + + + T+I C +R D A+ FE + +L
Sbjct: 293 VRN---------GCVCNVVSYN-----TLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT 338
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI------HRLGSARRPVPAAK 416
Y LI L + + EM G + ++L+ HRL A + A +
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+L P+ Q Y I AG + A ++ + +G+ P + T N+++ GL K
Sbjct: 399 GSNLDPDVQ----VYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKR 454
Query: 477 GRVSDAEIYRKE 488
G + +A +E
Sbjct: 455 GLLDEASKLFRE 466
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M++A F+ + R+ G + +Y T+++ + + +RI Y+FE M + + + +TY+
Sbjct: 282 MDEAVKVFDMMVRN-GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYS 340
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++H L + G + A+ ++ EM P +V+Y+ + L N R+ EA + K +
Sbjct: 341 TLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGS 400
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
L P+ Y + ++ + RAG E A ++FS + G+QPD NI+I CK G
Sbjct: 401 NLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEA 460
Query: 226 ILILRYMKEN 235
+ R M EN
Sbjct: 461 SKLFREMDEN 470
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 83/161 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++D + VF++M G + V+Y ++++ +D A
Sbjct: 261 GVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKA 320
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++EEM +E P ++Y+ + L R+++A ++ EM+ G PN TY++L++Y
Sbjct: 321 MYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L + + EA+ + ++ + + PD NI I+ C+AG+
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGD 421
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 106/233 (45%), Gaps = 2/233 (0%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ K+ YST S + + I D YT+ V+ + + + + +++ H
Sbjct: 63 LTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGH 122
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I VF+ M +G + VTY ++M+ L + A+N
Sbjct: 123 QPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALN 182
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++ EM K P I +Y + + L K T + EM++ + PN + ++++ L
Sbjct: 183 LFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALC 242
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ GK EA ++ M + GV+PD L++ C E + + M N
Sbjct: 243 KEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN 295
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + TY T+++ + ++++ +F M KGI+ D TY S++H L N +
Sbjct: 156 GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHV 215
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM + P +VS + L +V EA DV MIQ G+ P+ TY LM+
Sbjct: 216 TTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDG 275
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ +EA+++F M G + + N LI CK
Sbjct: 276 HCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCK 313
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 142/371 (38%), Gaps = 57/371 (15%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D A++ + M P I + + + + K+M G+PP+ YT T+
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
++ + + AL + +K+ + G QPD A L+ C G+
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGK--------------- 141
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
EAL F D ++ + F P ++ T + G
Sbjct: 142 -------IGEALDVF------DKMVGE---GFQPNVVT-------YGTLMNG-------- 170
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
L K + L +L S ++ K I D +++I C+ VK +
Sbjct: 171 ---LCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKI 227
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI--HRLGSARRPVPA 414
+ ++ L K + ++V+ M + G V A L+ H L S A
Sbjct: 228 MPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD--EA 285
Query: 415 AKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
K+F ++ + C +Y LI Y DKA+ +++ MCR+ + P+ T++ L+
Sbjct: 286 VKVFDMMVRN-GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIH 344
Query: 472 GLEKLGRVSDA 482
GL +GR+ DA
Sbjct: 345 GLCHVGRLQDA 355
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 77/162 (47%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ +LD + R++ + + ++ ++ D Y + + AGD++ A +++ +
Sbjct: 373 TYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL 432
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P + ++ ++ L + EA+ +++EM + G N TY + + L++ K
Sbjct: 433 APRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKT 492
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
A+++ +M G D + +L++ G +++ IL
Sbjct: 493 SRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 172/408 (42%), Gaps = 55/408 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +L + + + + VF M++ G AV Y + + L GD AV I+E M
Sbjct: 205 TYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERM 264
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C P+ +YT + + + A V+ EM + PN T+T L+ R G
Sbjct: 265 KRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLC 324
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVF 244
E+A EIF ++QEAG++PD A N L+E +AG I ++++M Y +
Sbjct: 325 EKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIM 384
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+A + E+ +++V + +T P L+L +
Sbjct: 385 VDAYGRAGL-HEDAQAVFEVMKRLG------------IT-----PTMKSHMLLLSAYSRA 426
Query: 305 NLVA-IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
VA + +++ + I+ D+ V+++++ + G L FE ++ +E+ Y
Sbjct: 427 GKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLY-------GRLGQFEKMEEVLTAMEKGPY 479
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
A I L + +Y A R+ R +PA +L+P+
Sbjct: 480 PADISTYNIL-------------------INIYGRAGFFARMEELFRSLPAR---NLIPD 517
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
T+T+ IG Y ++ L++++ M G +P GT VLL+
Sbjct: 518 ----VVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLS 561
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA F + R GF Y +D + +FE M+ TYT
Sbjct: 219 LEKAEAVFAEM-RKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYT 277
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ A A+ ++ EM+ ++C P I ++TA + ++A ++++++ +
Sbjct: 278 MLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA 337
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P+ Y Y LME RAG A EIFS MQ G +PD+A+ NI+++ +AG
Sbjct: 338 GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDA 397
Query: 226 ILILRYMK 233
+ MK
Sbjct: 398 QAVFEVMK 405
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKA F + + G D + Y +++ + A +F LMQ G D +Y
Sbjct: 325 EKAEEIFEQLQEA-GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 383
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ AG + A ++E MK PT+ S+ + +V + ++ +M + G
Sbjct: 384 MVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG 443
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ P+ + ++ R G++E+ E+ + M++ D + NILI +AG
Sbjct: 444 IKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAG 497
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 42/256 (16%)
Query: 24 LKNLPIKWDSYTVNQVLKTHP----PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
L+ ++ D Y N +++ + P A +F + + G DR +Y M+D +G A
Sbjct: 334 LQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS--LMQHMGCEPDRASYNIMVDAYGRA 391
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM------------ 127
+ VFE+M+ GI ++ ++ S AG V I +M
Sbjct: 392 GLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVL 451
Query: 128 --------------KLKEC--------YPT-IVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
K++E YP I +Y + I ++++ +
Sbjct: 452 NSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPA 511
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P+ T+T + R +Y LE+F +M +AG PD +L+ C + +
Sbjct: 512 RNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQE 571
Query: 225 IILILRYM-KENRLAL 239
+ ++R M K+ R +L
Sbjct: 572 VTTVIRTMHKDMRTSL 587
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
+ AL+ + K EI E++ +AG VY L+ A P AA+IFSL+
Sbjct: 311 FTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM- 369
Query: 423 EDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ C A+Y ++ Y AG + A +++ M R GI P++ + +LL+ + G+V
Sbjct: 370 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 429
Query: 480 SDAE--IYRKEKKSIQADAL 497
+ E + + K I+ D
Sbjct: 430 AKCEEIVNQMHKSGIKPDTF 449
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y A I L+K K EI E M + +LI+ G A + A K+F +
Sbjct: 241 YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEM- 299
Query: 423 EDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
QKC T+TAL+ + G +KA +I++ + G+ P + +N L+ + G
Sbjct: 300 RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAG 357
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
K + EM K G + I L A +IF + D Q TATYT LI
Sbjct: 221 KAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLI 280
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+Y A + ALK++ M + P++ TF L+ + G AE
Sbjct: 281 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAE 328
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 89/162 (54%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTY +++D + K ++ K++F + ++G+N + +Y+ ++H VD
Sbjct: 311 QGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDE 370
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+N+++EM P +V+Y + + L ++ A + EM RG+P + TY +++
Sbjct: 371 AMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILD 430
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L + + ++A+ + +KM++ G+QPD L++ CK G
Sbjct: 431 ALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 172/406 (42%), Gaps = 26/406 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF+ ++ +Y T+++ + + S+ + + K + + V Y +++ + V+ A
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 231
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ EM K P +V+Y A + + ++K+ATD++ +MI + PN YT+ +L++
Sbjct: 232 FDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDG 291
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE---NRL 237
+ + +EA + + M + G++PD N L+++ C E I + + N
Sbjct: 292 FCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPN 351
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVH-PQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
Y + K DE +L ++H P+ ++ N I+G + G
Sbjct: 352 IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL-------IDGLCKL--GK 402
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ LK L+ + D+ + D ++I++ C + + D A+ +
Sbjct: 403 ISYALK---------LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y L+ L K + E++ G+ L V + +I S +
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513
Query: 417 IFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ S + E+ C TY +I F DKA K+ + M +G+
Sbjct: 514 LLSKM-EENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 4/233 (1%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK D +T N ++ + + KA FN +S+ RG N + +Y+ M+ F + K++
Sbjct: 313 IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQ-RGVNPNIHSYSIMIHGFCKIKKVDEA 371
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+F+ M I D VTY S++ L G + A+ + +EM + ++Y + +
Sbjct: 372 MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDA 431
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L N +V +A + +M G+ P+ TYT L++ L + G+ E+A +F + G D
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
+I+ C G + +L M+EN ++ + + DEND
Sbjct: 492 VNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDEND 544
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + D TY ++ F ++ +F M + IN + T+ ++ +
Sbjct: 240 SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLK 299
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A N+ M + P + +Y + M L V +A ++ + QRG+ PN ++Y++++
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMI 359
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ K +EA+ +F +M + PD N LI+ CK G+
Sbjct: 360 HGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGK 402
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 145/353 (41%), Gaps = 29/353 (8%)
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
V ++++ G PN T T L++ L G+ +AL+ K+ G +K + LI C
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 218 KAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFI 273
K G+T + +LR + + + Y +++ K+ +E L + V SP+ +
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248
Query: 274 SDN-------------DAVEF----VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI 316
+ N DA + + +I + LV K++ L ++L+ +
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
M + I+ D +++++ C + + A F + +N +Y +I K+
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATY 431
+ + +EM V LI L + A K+ + P D+ TY
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK---ITY 425
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+++ DKA+ + M +GI P + T+ L+ GL K GR+ DA I
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Query: 8 VYKILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGF 62
++ K D A +L K + I D T N ++ + K V RG
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
HD+ TY ++LD + ++ + M+++GI D TYT+++ L G ++ A
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
++E++ +K + YTA ++ + E+ D+ +M + G PN TY +++ L
Sbjct: 479 VFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLF 538
Query: 183 RAGKYEEALEIFSKMQEAGV 202
+ ++A ++ +M G+
Sbjct: 539 DKDENDKAEKLLREMITRGL 558
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSR 60
I + K+ K S D + + + D T N +L K H ++KA + +
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ-VDKAIALLTKM-KDE 451
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TYTT++D + R+ + VFE + KG +D YT+++ + G D +
Sbjct: 452 GIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDES 511
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+++ +M+ C P V+Y + LF D +A + +EMI RGL
Sbjct: 512 LDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 138/331 (41%), Gaps = 24/331 (7%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q+ P+ + + ++ LV++ Y + + +M+ G+ D +ILI + G+
Sbjct: 65 QKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNP 124
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHP--QFSPEFISDNDAVEF 281
+L + L + Y + + T + L Q+H QF + ++ +
Sbjct: 125 LSFSVLAKI----LKMGY---EPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNK 177
Query: 282 VT--TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
V+ T I G + Q A LL + K +Q + + +TII+ C +
Sbjct: 178 VSYGTLINGLCKVGQT-----------SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVK 226
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
+ A + V ++ + Y ALI + ++ +M + VY
Sbjct: 227 LVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFN 286
Query: 400 LLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
+L+ RR A + +++ + + TY +L+ Y +KA I+ T+ ++
Sbjct: 287 ILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR 346
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G++P++ ++++++ G K+ +V +A KE
Sbjct: 347 GVNPNIHSYSIMIHGFCKIKKVDEAMNLFKE 377
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 24/349 (6%)
Query: 42 THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDA 101
+ P W+ F+ ++ TY T L++ G++ R+S + F MQ++GI
Sbjct: 148 NYSPGTVEWMIFSGIA----------TYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAV 197
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
T+T +++ A D A +++ M+ C P + +YTA M A +++ E
Sbjct: 198 NTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAE 257
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ G P+ YTY L+E R A E+F M EAGV+PD+ + NILI+ +AG
Sbjct: 258 LQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGL 317
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
T + MKE FK ++ LL + + ++ E
Sbjct: 318 TADAQAVYDSMKE--------------AGFKPTMKSHMLLLSSYAKAGKVTEAERLVREI 363
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+ ++ + L+ + ++SLL ++ + D + ++T+I
Sbjct: 364 ENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYI 423
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ A F L + ++ +L+G + F K I ++M KAG
Sbjct: 424 EKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAG 472
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 72/156 (46%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF ++ +L + +A +++ + + ++ G+ D + S++ N+G +D
Sbjct: 332 GFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEM 391
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ E M P I + + +++A +V+ + +GL P+ ++T LM
Sbjct: 392 ESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGA 451
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+ + + + IF KM +AG PD+A + + C
Sbjct: 452 YAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLSSC 487
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y AL+ + + EI E+ G VY L+ P A ++F +
Sbjct: 235 YTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMV 294
Query: 423 E-----DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
E DQ +Y LI + AG A +Y +M G P++ + +LL+ K G
Sbjct: 295 EAGVRPDQ---VSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAG 351
Query: 478 RVSDAEIYRKE 488
+V++AE +E
Sbjct: 352 KVTEAERLVRE 362
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T T+++ + + I + VF ++ KG+ D +++TS+M + V+I+
Sbjct: 406 DISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIF 465
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++M C P + ++ ++VKE TD MI+R
Sbjct: 466 QKMVKAGCIPDRATAKVFLSSCRSPEQVKEVTD----MIER 502
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y ++ +G IS V + M+ GI +TY S+M+W+ +AG V+ A
Sbjct: 597 GLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEA 656
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
I+ + LK ++ YT ++ ++ EA +KEM R + PN TYT LM
Sbjct: 657 KEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYA 716
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ G EEA ++F +M +G+ PD + N LI CC+ I+
Sbjct: 717 YCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIV 762
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 175/450 (38%), Gaps = 29/450 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +TYT M+ A I + + ++ GI VTY +M L +G V+ A +
Sbjct: 215 DVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLK 274
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M P+IV++ + L R E V +EM G+ PN Y L+ + R
Sbjct: 275 GRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCRE 334
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G EAL +F +M G++ N++ + CK GE IL M + + +F
Sbjct: 335 GHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLF 394
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG---------------- 288
+ ++ ++ + F+ NDAV +T I+
Sbjct: 395 NSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAV--MTACIQELCKRGKHEEAAEIWFL 452
Query: 289 --------PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
++ L+ L + N+ +L ++D ++ D + +I+ C +
Sbjct: 453 VLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASK 512
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
+ A+ + +K + + + L + ++++M G +
Sbjct: 513 MEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGT 572
Query: 401 LIHRLGSARRPVPAAK-IFSLLPEDQKCTAT-YTALIGVYFSAGSADKALKIYKTMCRKG 458
+I A+ A K + L+ + A Y ALIG Y GS A+ + TM G
Sbjct: 573 IIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNG 632
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
I P+ T+N L+ + G V +A EI+ +
Sbjct: 633 IQPTPITYNSLMYWMCHAGLVEEAKEIFAQ 662
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 4/194 (2%)
Query: 30 KWDSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHDRFTYTTMLDIFGEAKRI-SSMK 86
K D +T N L+ + + K + + +S G D TY T++D + +AK + + K
Sbjct: 529 KPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANK 588
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
Y+ EL++ G+ +AV Y +++ G + A+ + + MK PT ++Y + M +
Sbjct: 589 YLIELIK-NGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWM 647
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
V+EA +++ + I + + YT++++ + GK +EA+ F +M ++P+K
Sbjct: 648 CHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNK 707
Query: 207 AACNILIEKCCKAG 220
L+ CK G
Sbjct: 708 MTYTTLMYAYCKCG 721
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RGF D FT+ T L + ++ + ++ + M+ +G+ D VTY +++ A DV
Sbjct: 526 RGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHK 585
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A E+ P V Y A + N + +A V M G+ P TY LM
Sbjct: 586 ANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMY 645
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
++ AG EEA EIF++ ++ I+I+ CK G+ ++ + M
Sbjct: 646 WMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 698
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 161/395 (40%), Gaps = 31/395 (7%)
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-RGLPPNCYT 173
G + A + + E+ + P+I + ++ L ++ A V+ EM + P+ YT
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
YTV+++ L RAG+ + A + ++++ +G+QP N+L++ C++G + M
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278
Query: 234 ENRLA---LRYPVFKEALQTFKVADENDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGP 289
E RL + + + L + E D++L ++ +P + N + + EG
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCR--EGH 336
Query: 290 LS---------IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD--- 337
S + +G+ ++ NL+A G M+ + Q+ ++ + V+C
Sbjct: 337 CSEALRLFDEMVSKGIKQTVV-TYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFN 395
Query: 338 -----HRRRDG----ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
H R G L V L A I L K + AEI +
Sbjct: 396 SVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLG 455
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADK 446
G + + LIH L A K+ + + + TY +I A ++
Sbjct: 456 KGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEE 515
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
A+++ M ++G P L TFN L LG+V D
Sbjct: 516 AIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVED 550
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR TY M+ +A ++ + + M ++G D T+ + + N G V+
Sbjct: 492 GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDI 551
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK------EMIQRGLPPNCYTY 174
+++ ++MK + P IV+Y + D +A DV+K E+I+ GL PN Y
Sbjct: 552 LHLLDQMKSEGLKPDIVTYGTII------DGYCKAKDVHKANKYLIELIKNGLRPNAVIY 605
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L+ R G +A+ + M+ G+QP N L+ C AG
Sbjct: 606 NALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAG 651
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/439 (20%), Positives = 169/439 (38%), Gaps = 24/439 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +++ +R + V + M+ GI + V Y ++ W G A+ +++EM
Sbjct: 288 TFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEM 347
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA-GK 186
K T+V+Y K L ++ A + EM+ G+ +C + ++ + +R G+
Sbjct: 348 VSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGR 407
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV--- 243
+ L + +M ++P+ A I++ CK G+ I + L +
Sbjct: 408 LDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNA 467
Query: 244 ----------FKEALQTFKV----ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
KEA + K E D + + + QF + +A++ I+
Sbjct: 468 LIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG 527
Query: 290 LSIDQGLVLILLKKK-NLVAIDS---LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
D L+ NL ++ LL + + ++ D TII+ C + A
Sbjct: 528 FKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKAN 587
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+K L Y ALIG + + +++ M G L++ +
Sbjct: 588 KYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWM 647
Query: 406 GSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
A A +IF+ +L + YT +I + G D+A+ +K M + I P+
Sbjct: 648 CHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNK 707
Query: 464 GTFNVLLAGLEKLGRVSDA 482
T+ L+ K G +A
Sbjct: 708 MTYTTLMYAYCKCGNKEEA 726
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 60/141 (42%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G TY +++ A + K +F K I + + YT ++ G +
Sbjct: 629 KHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKI 688
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV ++EM ++ P ++YT M +EA ++ EM+ G+ P+ +Y L
Sbjct: 689 DEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTL 748
Query: 178 MEYLVRAGKYEEALEIFSKMQ 198
+ ++ +E ++M
Sbjct: 749 ISGCCEVDSLDKIVESPAEMS 769
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 192/448 (42%), Gaps = 30/448 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +TY +L ++ +S V+E M+ KG +D Y ++ L+ +G VD A
Sbjct: 181 GLRLNGYTYKCILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQA 240
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++E+MK K C P +YT +++ + + + EM+ +G N Y L+E
Sbjct: 241 YQVFEDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEA 300
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL----RYMKENR 236
L + ++ + + SKM E G QP++ +I ++ K G+ + +L RYM ++
Sbjct: 301 LGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDRYMNKS- 359
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
Y ++L E ++ Q+ + D DA FV+ L
Sbjct: 360 ---IYSYLVKSLSKSGHVSEAHNVFCQMWNSYE---TGDRDA--FVSM-----------L 400
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
++ K L AID LL + +K + D + + + ++ F+ +
Sbjct: 401 EVLCNSGKTLEAID-LLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGI 459
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y +I ++ K + + E+M + V LI+ LG A
Sbjct: 460 APDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHM 519
Query: 417 IFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+F + E TY+ LI + + D A ++ M +G P++ T+N+LL LE
Sbjct: 520 LFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLE 579
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAV 502
+ G+ ++A K ++++ L+ D++
Sbjct: 580 RHGKTAEAH---KHYETMKQQGLTPDSI 604
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 83/155 (53%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D FTY M+ +G + +FE M D +TY S+++ L GD+
Sbjct: 455 KANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDL 514
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A +++EM+ K P + +Y+ ++ +++V A +++ +MI G PN TY +L
Sbjct: 515 DEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNIL 574
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++ L R GK EA + + M++ G+ PD C+IL
Sbjct: 575 LDCLERHGKTAEAHKHYETMKQQGLTPDSITCSIL 609
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y + G+ K++S + +F+ M+ GI D TY ++ G VD
Sbjct: 422 KGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDK 481
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++E+M C P +++Y + + L N + EA ++KEM ++G P+ +TY++L+E
Sbjct: 482 ASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIE 541
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++ K + A +F M G P+ NIL++ + G+T
Sbjct: 542 CFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKT 584
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 194/467 (41%), Gaps = 57/467 (12%)
Query: 27 LPIKW----DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
L +KW + YT +L+ H + K + + + R +G+ D F Y +LD ++
Sbjct: 176 LAMKWGLRLNGYTYKCILQAHLRSREVSKGFEVYEEMRR-KGYMLDIFGYNMLLDALAKS 234
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ VFE M++K DA TYT ++ AG ++ ++EM K C +++Y
Sbjct: 235 GMVDQAYQVFEDMKQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAY 294
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG---KYEEALEIFSK 196
++ L N V + V +MI+ G PN +TY++ ++ L + G + E L+I +
Sbjct: 295 NTLIEALGKNKMVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDICDR 354
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
+K+ + L++ K+G ++ + VF + +++ D
Sbjct: 355 YM------NKSIYSYLVKSLSKSGH---------------VSEAHNVFCQMWNSYETGDR 393
Query: 257 NDSLLWQVHPQFSPEFISDN----DAVEFVTTDIEGPLSIDQGLVLILL----KKKNLVA 308
D+ + + E + ++ +A++ + E ++ D G+ ++ K K +
Sbjct: 394 -DAFVSML------EVLCNSGKTLEAIDLLHMMPEKGVATDVGMYNMVFSALGKLKQVSF 446
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
I SL + I D + +I D A FE + Y +LI
Sbjct: 447 ITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLIN 506
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLP 422
L K + + +EM + G+ V+ ++LI G + + A +F +P
Sbjct: 507 CLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIP 566
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
TY L+ G +A K Y+TM ++G+ P T ++L
Sbjct: 567 N----VVTYNILLDCLERHGKTAEAHKHYETMKQQGLTPDSITCSIL 609
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/502 (21%), Positives = 195/502 (38%), Gaps = 62/502 (12%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEK-AWLFFNWVSRS-RGFNHDRFTYTTMLDIF--- 76
D L++ + + ++++K P A FF + S GF HD F+Y +L +
Sbjct: 72 DYLRDRCLMLTASEASEIVKALSPNPALALAFFRFAPASFPGFRHDAFSYNRILALLFRT 131
Query: 77 ----GEAKRISS--------------------------MKYVFELMQEKGINIDAVTYTS 106
EA RI S + EL + G+ ++ TY
Sbjct: 132 RADPSEALRIVSEMERDGVSGNISTVNLLVGIGGGGVEVTKCLELAMKWGLRLNGYTYKC 191
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ + +V ++EEM+ K I Y + L + V +A V+++M Q+
Sbjct: 192 ILQAHLRSREVSKGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFEDMKQKY 251
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
P+ YTYT+L+ RAGK + L F +M G + A N LIE K +I
Sbjct: 252 CEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCALNLIAYNTLIEALGKNKMVDKVI 311
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
+L M E + F ++ +A E Q+H N+ ++ +
Sbjct: 312 FVLSKMIEG--GCQPNQFTYSITLDILAKEG-----QLHRL--------NEVLDICDRYM 356
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
SI LV L K ++ ++ + + D +++EV C+ + A+
Sbjct: 357 NK--SIYSYLVKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAID 414
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
+ + + Y + L KL + + ++M G + ++ ++I G
Sbjct: 415 LLHMMPEKGVATDVGMYNMVFSALGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYG 474
Query: 407 SARRPVPAAKIFSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
A+ +F ED ++ TY +LI G D+A ++K M KG
Sbjct: 475 RVGLVDKASGLF----EDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYG 530
Query: 461 PSLGTFNVLLAGLEKLGRVSDA 482
P + T+++L+ K +V A
Sbjct: 531 PDVFTYSILIECFGKSNKVDMA 552
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 167/428 (39%), Gaps = 53/428 (12%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D TY T+L + VF+ M E GI + TY+ ++ G +
Sbjct: 246 RHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKL 305
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + +EM+ + P I SY ++ +KEA DV+K+M G PN TY++L
Sbjct: 306 EKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSIL 365
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + G+Y++ E+F +M+E+ +PD NILI + G
Sbjct: 366 LNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGG----------------- 408
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
FKE + F + V +I+ + +GLV
Sbjct: 409 -----YFKEVVTLFH---------------------------DLVDENIDPNMETYEGLV 436
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K +L + K I S S +IE D AL+AF ++
Sbjct: 437 FACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSK 496
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y +LI + + + I+ M + G S + +I + + A K
Sbjct: 497 STIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKA 556
Query: 418 FSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
F + E +C T ++GVY AG D++ + + + GI PS+ + ++LA
Sbjct: 557 FVEM-EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYA 615
Query: 475 KLGRVSDA 482
K GR DA
Sbjct: 616 KNGRWDDA 623
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 95/464 (20%), Positives = 182/464 (39%), Gaps = 67/464 (14%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
++ V + GD ++ +++ M+ + C P YT + +L +++ ++++ EM
Sbjct: 115 FSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEM 174
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG-E 221
+G+ + ++YT L+ R G+YE +LE+ +M+ V P+ N +I C + +
Sbjct: 175 ASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLD 234
Query: 222 TRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDND 277
++ + M+ + + Y A + DE + + + PE + +
Sbjct: 235 WEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSY 294
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKN------------LVAIDSLLSGI---MDKSIQ 322
VE G L + + ++L + ++ L+ + L I MD Q
Sbjct: 295 IVETF-----GKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQ 349
Query: 323 LDSA-------VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ +A S ++ + H R D F + + T Y LI + +
Sbjct: 350 MQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409
Query: 376 FPKVAEIVEEMTKAG--HSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKC 427
F +V + ++ ++ Y G L+ G A KI ++P +
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEG--LVFACGKGGLHEDAKKILFHMNGKGIVPSSK-- 465
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-----AGLEK-----LG 477
Y+ LI Y A D+AL + TM G ++ T+N L+ GL K L
Sbjct: 466 --AYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILS 523
Query: 478 RVSDAEIYRKEK----------KSIQADALSKDAVPMEEKICDL 511
R+ + I R K +S Q + K V ME+ C+L
Sbjct: 524 RMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCEL 567
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 194/495 (39%), Gaps = 69/495 (13%)
Query: 11 ILKYSTWDSAQDLLKNL--------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGF 62
+LK D+A+ L+ + P +D V+ MEKA F+ + S G
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC--VMSKEGVMEKAKALFDGMIAS-GL 378
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
Y ++++ + K + + M+++ I I TY +V+ + ++GD+DGA N
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
I +EM C P +V YT +K N R +A V KEM ++G+ P+ + Y L+ L
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
+A + +EA +M E G++P+ I +A E + +Y+KE R P
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD---KYVKEMRECGVLP 555
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+ L T GL+ K
Sbjct: 556 --NKVLCT--------------------------------------------GLINEYCK 569
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
K ++ S ++D+ I D+ + ++ + + D A F + + +
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y LI KL K + I +EM + G + V + +L LG R K LL
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML---LGGFCRSGEIEKAKELLD 686
Query: 423 ED-----QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
E TY +I Y +G +A +++ M KG+ P + L+ G +L
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 478 RVSDA-EIYRKEKKS 491
V A I+ KK
Sbjct: 747 DVERAITIFGTNKKG 761
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 170/429 (39%), Gaps = 22/429 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + D TY+ ++D + + + K + M GINI Y + +S G ++
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ M P +Y + ++ V++ ++ EM +R + + YTY ++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ + +G + A I +M +G +P+ LI+ + + +L+ MKE +A
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y L K DE S L VE V ++
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFL-----------------VEMVENGLKPNAFTYGA 527
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ ++ + D + + + + + + + +I C + A A+ V
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ + Y L+ L K + EI EM G + V+ +LI+ A+
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
IF + E+ Y L+G + +G +KA ++ M KG+HP+ T+ ++ G
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 474 EKLGRVSDA 482
K G +++A
Sbjct: 708 CKSGDLAEA 716
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D F+Y +++ F + + +F+ M E+G+ + + Y ++ +G++
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + +EM +K +P V+Y + + + EA ++ EM +GL P+ + YT L
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++ R E A+ IF + G A N LI K G+T
Sbjct: 739 VDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKT 782
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 128/605 (21%), Positives = 218/605 (36%), Gaps = 113/605 (18%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLL--KNLPIKWDSYTVNQVLKTHPPMEKAWL--FFNWV 56
+ D + + ILK W +D L NL I+ + V VL++ + + L FFNWV
Sbjct: 31 LSDASAEIAGILKQENW---RDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWV 87
Query: 57 SRSRGFNH--DRFTYTTM-LDIFGEAKRISSMKYVFELMQEK------------------ 95
+ D F++ + L FG ++ S V E M E+
Sbjct: 88 DSQKVTEQKLDSFSFLALDLCNFGSFEKALS---VVERMIERNWPVAEVWSSIVRCSQEF 144
Query: 96 -GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G + D V + + ++ AV ++ E P + + L +R+
Sbjct: 145 VGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDL 204
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE---------------------EALEI 193
DVYK M++R + + TY +L+ RAG + AL++
Sbjct: 205 FWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKL 264
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL---RYPVFKEALQT 250
M G+ P K ++LI+ CK +L M ++L Y + + L
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 251 FKVADENDSLLWQVHPQ---------------FSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ AD L+ ++ S E + + F G + Q
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 296 LVLIL---LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
++ ++KN+ LL + ++I + T+++ C DGA + +
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
Y LI ++ + F +++EM + G + ++ LI L A+R
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 413 PAAKIFSLLPED--QKCTATYTALIGVYFSA---GSADK--------------------- 446
A + E+ + TY A I Y A SADK
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 447 -----------ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK-KSIQ 493
A Y++M +GI T+ VL+ GL K +V DA EI+R+ + K I
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 494 ADALS 498
D S
Sbjct: 625 PDVFS 629
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 160/418 (38%), Gaps = 16/418 (3%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT+++ + A + + K + G D+ YTS + AG + A ++ M
Sbjct: 74 TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L+ C T +YTA + L V+EA V+ M G P+ + Y ++ L AG+
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA + S G +P+ N LI+ C G+ + + M N + + E
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ F + + D + + + V T I+G S Q L
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPN---VVTYTALIQGQCSDGQ-----------LD 299
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
LL + + + + S +I+ C H R A L ++ + + Y +LI
Sbjct: 300 CAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLI 359
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--Q 425
L K F +++ + G + + LI L + A + + E Q
Sbjct: 360 DGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQ 419
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TYT +I AD + KI M GI P + T+ + + GR+ DAE
Sbjct: 420 PSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 166/420 (39%), Gaps = 61/420 (14%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D Y TM+ A R + + +G + V Y +++ N GD+
Sbjct: 169 QADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDL 228
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ AV+++E M + C P + +YT + + ++ A ++ M+ GL PN TYT L
Sbjct: 229 ELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTAL 288
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK---AGETRTII--LILRYM 232
++ G+ + A + M+ +G+ P++ C++LI+ CK GE + ++ LI + +
Sbjct: 289 IQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGI 348
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
K N + T+ I+G
Sbjct: 349 KVNEIV-------------------------------------------YTSLIDG---- 361
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L K A D L+ ++ + D+ S++I+ C + A+L + +
Sbjct: 362 -------LCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMM 414
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ + Y +I L++ +I+++M AG V+ + + R
Sbjct: 415 EKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRME 474
Query: 413 PAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A + + + C TY ALI Y + G +A +K M G P+ ++ VLL
Sbjct: 475 DAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 196/469 (41%), Gaps = 61/469 (13%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + + TYT ++ F +++++ +F M + G+ + VTYT+++ + G +D A
Sbjct: 242 GCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCA 301
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + M+ P + + + L ++RV EA + +IQ+G+ N YT L++
Sbjct: 302 YRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDG 361
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL--- 237
L +AG++ A + + G PD + LI+ C+ E +L+L M E +
Sbjct: 362 LCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPS 421
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y + + L AD + +L + + P+ + V EG + + +
Sbjct: 422 PVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCH--EGRMEDAEHM 479
Query: 297 VLILLKK---KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
+L ++ NLV ++L+ G + + L S ST F++ V
Sbjct: 480 MLHMVDHGVCPNLVTYNALICGYAN--LGLTSQAFST-----------------FKHMVA 520
Query: 354 MDLNLERTAYLALIGILIK---LNTFP-------KVAE------IVEEMTKAGHS----- 392
+Y L+ +LIK N P K+AE ++EEM K
Sbjct: 521 NGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDI 580
Query: 393 LGVYLGALL-IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
+L +L + RL A+ + + +L P + YT++I +AL
Sbjct: 581 YNCFLTSLCRVDRLDEAKILLIEMQSANLTPSED----VYTSIIACCCRLKMLTEALTFV 636
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKD 500
+M + G P L ++ +++ L + G + A K + D LSK+
Sbjct: 637 DSMVKSGYIPQLESYRHIISSLCEEGSIQTA-------KQVFGDMLSKE 678
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 7/224 (3%)
Query: 18 DSAQDLLKNL------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D A LL+++ P +W + L H + +A L + + +G + YT+
Sbjct: 299 DCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQ-KGIKVNEIVYTS 357
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++D +A R ++ + + + +G DA TY+S++ L ++ A+ + ++M K
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P+ V+YT + L + + +MI G+ P+ +TYT+ + G+ E+A
Sbjct: 418 VQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ M + GV P+ N LI G T ++M N
Sbjct: 478 HMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVAN 521
>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 179/450 (39%), Gaps = 59/450 (13%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SR + +L+ R+ + + M KGI+ D V Y S++ G+
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQ 617
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A++I +EMK K +V+Y A +K L + + V MI+ GL P+C TY +
Sbjct: 618 LAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTI 676
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ GK E+AL+I ++M+ G+ P+ NILI CK G L M
Sbjct: 677 INTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEF 736
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
K ++ + +++ D +L Q+H + V + +E L++ L+
Sbjct: 737 VPTPITHKFLVKAYSRSEKADKIL-QIHEKL-------------VASGLELSLTVYNTLI 782
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ + +L ++ + I D + +I C + AL + +
Sbjct: 783 TVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIA 842
Query: 358 LERTAYLALIGIL----IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
T Y L+G L + + ++V EM + G VP
Sbjct: 843 PNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL--------------------VP 882
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
A ATY L+ Y G+ K + ++ M KG P+L T+NVL++
Sbjct: 883 NA-------------ATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 929
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
K G++ +A + + D L+K +P
Sbjct: 930 AKSGKMIEA-------RELLNDLLTKGRIP 952
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 205/520 (39%), Gaps = 114/520 (21%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T +++L F +++ +F M E G++ + V+Y ++++ L +G V A
Sbjct: 351 GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 410
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N+ +M ++ IV+ T M LF + KEA +V++ +++ L PNC TY+ L++
Sbjct: 411 FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 470
Query: 181 LVRAGKYE-----------------------------------EALEIFSKMQEAGVQPD 205
+ GK E +A+++ +M + V P+
Sbjct: 471 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 530
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA---DENDSLLW 262
ILI+ KAGE + MK RL +F L K DE SL+
Sbjct: 531 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLII 590
Query: 263 QVHPQ-FSPEFISDNDAVE--FVTTDIEGPLSIDQGLVLILLKKKNL----VAIDSLLSG 315
++ + P+ ++ ++ F + LSI Q + K+KN+ VA ++L+ G
Sbjct: 591 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM-----KEKNIRFDVVAYNALIKG 645
Query: 316 IM-----------DKSIQL----DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
++ + I+L D +TII C + + AL +
Sbjct: 646 LLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNA 705
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEM-------TKAGH---------------------- 391
Y LIG L K K ++EM T H
Sbjct: 706 VTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEK 765
Query: 392 --------SLGVYLGALLIH-RLGSARRPVPAAKIFSLLPEDQKCT-----ATYTALIGV 437
SL VY + + RLG R+ AK+ +L E K TY ALI
Sbjct: 766 LVASGLELSLTVYNTLITVFCRLGMTRK----AKV--VLDEMVKRGISADLVTYNALIRG 819
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
Y + +KALK Y M GI P++ T+N LL GL G
Sbjct: 820 YCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAG 859
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 195/498 (39%), Gaps = 78/498 (15%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFN-----WVSRSRGFNHD-------------RF 67
+K D T N +LK + +A FN W R N+D
Sbjct: 263 VKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV 322
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYTT++ + + + +++ M GI D VT +S+++ G + A ++ EM
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P VSY + LF + RV EA ++ +M+ RG+ + T T +M+ L + GK
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+EA E+F + + + P+ + L++ CK G+ L+L+ M++ + F
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502
Query: 248 LQTFK----VADENDSLLWQVHPQFSPEFI-----------------SDNDAVEFVTTDI 286
+ + ++ D L V P I +D+ E + +
Sbjct: 503 INGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL 562
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
E I L+ L + + SL+ + K I D +++I+ + AL
Sbjct: 563 EESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTF-PKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+ + ++ + AY ALI L++L + P+ + M + G
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY--VCSRMIELG--------------- 665
Query: 406 GSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
L P+ TY +I Y G + AL I M GI P+ T
Sbjct: 666 --------------LAPD----CITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVT 707
Query: 466 FNVLLAGLEKLGRVSDAE 483
+N+L+ GL K G V AE
Sbjct: 708 YNILIGGLCKTGAVEKAE 725
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 31 WDSYTVNQVLKTHPPME----KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
+DS T N ++K + + W+ +N V G D T++D + EA +S
Sbjct: 195 FDSITCNILVKGYCRIGLVQYAEWVMYNLVDG--GVTKDVIGLNTLIDGYCEAGLMSQAT 252
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM------------------- 127
+ E + ID VTY +++ GD+ A +++ E+
Sbjct: 253 ELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN 312
Query: 128 KLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
++K PT+V+YT AY K + V+E+ +YK+MI G+ P+ T + ++ R
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFV----GVEESHSLYKKMIMNGIMPDVVTCSSILYGFCR 368
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
GK EA +F +M E G+ P+ + +I K+G
Sbjct: 369 HGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 406
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 173/425 (40%), Gaps = 17/425 (4%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+ T+L F + +S +K ++ M G+ D + ++H L GD+D A+
Sbjct: 97 WNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNND 156
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ + V+Y + V + + EM++RGL + T +L++ R G +
Sbjct: 157 VVDI--DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQ 214
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
A + + + GV D N LI+ C+AG ++ + + + + L
Sbjct: 215 YAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLL 274
Query: 249 QTF-KVAD--ENDSLLWQVHPQFSPE-FISDNDAV-EFVTTDIEGPLSIDQGLVLILLKK 303
+ F K D +SL ++ + E + +ND V + +++ L L+ K
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKF 334
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+ SL ++ I D S+I+ C H + A + F +M L+ +Y
Sbjct: 335 VGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSY 394
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF----- 418
+I L K + + +M G S + ++ L + A ++F
Sbjct: 395 ATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILK 454
Query: 419 -SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+L P TY+AL+ Y G + A + + M ++ + P++ TF+ ++ G K G
Sbjct: 455 LNLAPN----CVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKG 510
Query: 478 RVSDA 482
+S A
Sbjct: 511 MLSKA 515
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 143/361 (39%), Gaps = 38/361 (10%)
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
+ +++ +DR A+ + M GL P + L+ +G + ++S M
Sbjct: 62 FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
GV PD + N+L+ CK G+ + L L Y++ N V D ++
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGD---LDLALGYLRNN----------------DVVDIDN 162
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI----DSLLS 314
V F + + D ++ ++ L D IL+K + + + ++
Sbjct: 163 VTYNTVIWGFCQKGLVDQ-GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMY 221
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++D + D ++T+I+ C+ A E S + D+ ++ Y L L
Sbjct: 222 NLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTL------LK 275
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTAL 434
F K ++ + LG + RL + V +I +L P TYT L
Sbjct: 276 AFCKTGDLTRAESLFNEILGFWKDE---DRLKN-NDVVTQNEIKNLQPT----LVTYTTL 327
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQA 494
I Y +++ +YK M GI P + T + +L G + G++++A + +E +
Sbjct: 328 IAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGL 387
Query: 495 D 495
D
Sbjct: 388 D 388
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG---- 115
RG + D TY ++ + + + M GI + TY +++ LSNAG
Sbjct: 804 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEE 863
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
++ + EM + P +Y + K+ ++ EMI +G P TY
Sbjct: 864 MMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYN 923
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
VL+ ++GK EA E+ + + G P+ +IL
Sbjct: 924 VLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 960
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 160/420 (38%), Gaps = 56/420 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY+ ++D + +R+ + E M E+G VTY S++ A VD
Sbjct: 103 RGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDE 162
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A E+M + C+P I++YTA + + V ++ E+ +RG P+ TY+ +++
Sbjct: 163 AHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVID 222
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L +AG+ +A++IF +M A P N LI C+AG+ I +L M +++ A
Sbjct: 223 GLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAP 279
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + F D DA E + LS D
Sbjct: 280 DVVTYTTLMSAFCKMGRLD------------------DAYELFQQMVANKLSPD------ 315
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+V SL+ G+ C R + AL E +
Sbjct: 316 ------VVTFTSLVDGL-------------------CGEGRMEDALELLEEITRRGCPPT 350
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y ++ K N K E+V + G +L+ A R A +
Sbjct: 351 IYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD 410
Query: 420 LLPEDQKCTATYTALIGVYFSA----GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
L + T A+ + A G D A++ Y+ M ++G P+ TF ++ L K
Sbjct: 411 QLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCK 470
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+ V+R RGF D TY+T++D +A R+ +FE E A+TY S+
Sbjct: 197 RGLELLGEVTR-RGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMSCAPTAITYNSL 252
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ AGD+D A+ + +M +C P +V+YT M R+ +A +++++M+ L
Sbjct: 253 IGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
P+ T+T L++ L G+ E+ALE+ ++ G P N +++ CKA + R
Sbjct: 313 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVR 368
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 168/415 (40%), Gaps = 30/415 (7%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D +TYT ++H LS A + AV + +EM P + T ++ L L DRV +A ++
Sbjct: 38 DFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 97
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+EM+ RG+ N TY+ L++ L + + +EA+ + M E G P N +I C+A
Sbjct: 98 EEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRA 157
Query: 220 GETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISD 275
+ M + Y + LL +V + F+P+ ++
Sbjct: 158 RRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTY 217
Query: 276 N-------------DAVEFVTTDIEGPLSID-QGLVLILLKKKNLVAIDSLLSGIMDKSI 321
+ DAV+ P +I L+ + ++ LL ++D
Sbjct: 218 STVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKC 277
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
D +T++ C R D A F+ V L+ + + +L+ L E
Sbjct: 278 APDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337
Query: 382 IVEEMTKAGHSLGVYL------GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALI 435
++EE+T+ G +Y G +++ A V + +P T TY L+
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPN----TVTYNILV 393
Query: 436 GVYFSAGSADKALKIYKTMCRKG--IHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
AG D+AL+ + +G S+ + ++L L + GR DA + +E
Sbjct: 394 AGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 448
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 143/338 (42%), Gaps = 19/338 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + D TYT ++ F +++ + + + +G D VTY++V+ L AG +
Sbjct: 172 AEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLR 231
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV+I+EEM C PT ++Y + + + EA + +M+ P+ TYT LM
Sbjct: 232 DAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLM 288
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ G+ ++A E+F +M + PD L++ C G + +L +
Sbjct: 289 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC- 347
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ T+ + QV + E ++D + FV + + + G
Sbjct: 348 ------PPTIYTYNCVVDGYCKANQVRK--AEELVADFRSRGFVPNTVTYNILV-AGCCR 398
Query: 299 ILLKKKNLVAIDSLLS--GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ L +D L S G S+ A+ + I++ C R D A+ +E ++
Sbjct: 399 AGRTDQALQYLDQLNSEGGPCPTSV----AMYAIILDALCRDGRTDDAVQFYEEMIQRGY 454
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
+ ++ L K + + E++EEM K GH+ G
Sbjct: 455 VPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 492
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A ++R RG +TY ++D + +A ++ + + + +G + VTY
Sbjct: 332 MEDALELLEEITR-RGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYN 390
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
++ AG D A+ +++ + C ++ Y + L + R +A Y+EMI
Sbjct: 391 ILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 450
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
QRG P T+ ++ L +A + ++A E+ +M + G P C+ ++ C+AG
Sbjct: 451 QRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAG 507
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 165/409 (40%), Gaps = 27/409 (6%)
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
+N + + V+ L AG + A+ ++ +M P ++YT + L R+++A
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAV 59
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
V +EM+ P+ T TV+++ L + ++A E+ +M G+ + + L++
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN 276
CK + ++ M E A + + F A D + H F + +++
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVD----EAH-GFMEQMVAEG 174
Query: 277 DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
+ +T L+ K +++ LL + + D ST+I+ C
Sbjct: 175 CHPDIITY---------TALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLC 225
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
R A+ FE +M Y +LIG + + ++ +M + V
Sbjct: 226 KAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVV 282
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTM 454
L+ R A ++F + ++ T+T+L+ G + AL++ + +
Sbjct: 283 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
R+G P++ T+N ++ G K +V AE + AD S+ VP
Sbjct: 343 TRRGCPPTIYTYNCVVDGYCKANQVRKAE-------ELVADFRSRGFVP 384
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVT-YTSVMHWLSNAG 115
RSRGF + TY ++ A R +++Y+ +L E G +V Y ++ L G
Sbjct: 378 RSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDG 437
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D AV +EEM + P ++ + L + ++A ++ +EMI+ G P T
Sbjct: 438 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 497
Query: 176 VLMEYLVRAGKYEEALEIFSKMQ 198
++ RAG ++A E+ S+++
Sbjct: 498 AVVSAYCRAGMIQKADELASELR 520
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 114/280 (40%), Gaps = 22/280 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DRF+Y T++ ++ + M ++GI D VT+ S +H L G V A
Sbjct: 208 GVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEA 267
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM + P V+YT + V+EA + M G+ P TY ++
Sbjct: 268 AQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRK 327
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L G +E + +M VQ D CN LI CK G+ + + + M E+ L L
Sbjct: 328 LCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLN 387
Query: 241 YPVFKEALQTFKVADEND----SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ +K + F A E D + V FSP + S+ L
Sbjct: 388 HFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNY------------------SVFSWL 429
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
V KK N A+ ++ +M + + D AV ++I C
Sbjct: 430 VDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLC 469
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 87/204 (42%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
R D T T+++ + + ++S V + M E G+ ++ TY +++H A ++D
Sbjct: 346 GRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELD 405
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
GA + +M P ++ + + + E+++RGLPP+ Y L+
Sbjct: 406 GAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLI 465
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L R G ++A +F +MQ G+ D L G + L M +N+L
Sbjct: 466 RRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQLY 525
Query: 239 LRYPVFKEALQTFKVADENDSLLW 262
+ ++ ++ E ++LW
Sbjct: 526 ITPQIYNCLCTSYADEKETLNMLW 549
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 145/407 (35%), Gaps = 56/407 (13%)
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ ++ R VF+ M+ +G+ DA T+++ L+ A A +++EM
Sbjct: 117 VLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAA 176
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
T Y A + + +A + M G+ + ++Y ++ R G EA+
Sbjct: 177 TTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCAR 236
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+M + G++PD N I CK G KEA Q F
Sbjct: 237 DRMDKEGIRPDTVTWNSSIHGLCKEGRV----------------------KEAAQLFT-- 272
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVE--FVTTDIEGPLSID---------------QGLV 297
V Q +P+ ++ ++ ++E + + ++
Sbjct: 273 -------EMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAIL 325
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L + N+ + LL + + +Q D +T+I C A + ++ L
Sbjct: 326 RKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQ 385
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL-----GSARRPV 412
L Y ALI K E +M AG S + + L+ A +
Sbjct: 386 LNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAI 445
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
P + LP D+ A Y +LI G D+A +++ M KG+
Sbjct: 446 PDELMKRGLPPDK---AVYRSLIRRLCRKGLVDQAQRVFDQMQSKGL 489
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 402 IHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
IH L R AA++F+ + Q TYT LI Y AG+ ++A+K+ M G+
Sbjct: 255 IHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGM 314
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
P + T+N +L L + G + + ++ + + +QAD ++
Sbjct: 315 LPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVT 355
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 99/190 (52%), Gaps = 2/190 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK-RISSMKYVFELMQEKGINIDAVTYT 105
+KAW + + S G D T +T+L G+ + + + + +F ++E GI TY
Sbjct: 62 KKAWRMYEDMVES-GIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYN 120
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ LS G + + EM+ E P I+++ + + R+KEA +VY+ ++
Sbjct: 121 TLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDA 180
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P TYT L++ RA K++EA+E+F +M+ G +PD +++I KAG
Sbjct: 181 GLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEA 240
Query: 226 ILILRYMKEN 235
L+ R ++ +
Sbjct: 241 ALVFRQLQND 250
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 122/297 (41%), Gaps = 43/297 (14%)
Query: 17 WDSAQDLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSR-------------- 58
W +D++++ I+ D T++ +L KT P+E A F+ +
Sbjct: 65 WRMYEDMVES-GIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLL 123
Query: 59 ---SRGFNHDR-----------------FTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
SRG + +R T+ T+L + + R+ V++ + + G+
Sbjct: 124 SVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLK 183
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
VTYT ++ A A+ ++ EM+ C P ++ Y+ + + +EA V
Sbjct: 184 PTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALV 243
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
++++ G PN T+ L++ GK +E F++M +G PD N+++ +
Sbjct: 244 FRQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGR 303
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPE 271
G + ++ R M+ ++ + +Q + + AD L FSP+
Sbjct: 304 YGHSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPD 360
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 65/155 (41%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D Y+ M+ ++G+A VF +Q G + VT+ ++ G +
Sbjct: 213 RRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCLIQAFGWQGKM 272
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ EM C P + Y M +A +++ M +G+ PN +Y +
Sbjct: 273 QEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVSYDTM 332
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++ + + +A + +M AG PD+++ +L
Sbjct: 333 IQAYCHSKQAADAQIVLDQMTRAGFSPDRSSRAML 367
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 139/381 (36%), Gaps = 61/381 (16%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P +YT + +L +A +++ EM+ G+ +++ ++ R G +++A +
Sbjct: 8 PNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRM 67
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAG-ETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+ M E+G+Q D+ + L+ K T I +KEN + R + L
Sbjct: 68 YEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSVLS 127
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
H + E + +E V N++ ++L
Sbjct: 128 RGG---------HTERCKELEIEMQRLEVV---------------------PNIITFNTL 157
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT--AYLALIGIL 370
L + + + EV Y +D L+ T Y L+ +
Sbjct: 158 L------MMHVQGGRLKEAAEV---------------YQRILDAGLKPTVVTYTGLVQMY 196
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--T 428
+ + + E+ EM + G + + +L+I G A AA +F L D
Sbjct: 197 CRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNV 256
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR-VSDAEIYRK 487
T+ LI + G + + M G P L +NV++ + G V A ++R+
Sbjct: 257 VTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHSVQAAILFRR 316
Query: 488 EKKSIQADALSKDAVPMEEKI 508
+QA +S +AV + I
Sbjct: 317 ----MQAQGISPNAVSYDTMI 333
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +Y +L F + K++ E+M +G D VTY +++ L G VD A
Sbjct: 378 GCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAA 437
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V I ++ K C P +++Y + L + + A ++ +EM ++GL P+ TY+ L+
Sbjct: 438 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRG 497
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L R GK +EA++IF M+ ++P N ++ CKA +T I L YM E
Sbjct: 498 LGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE 551
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 173/429 (40%), Gaps = 37/429 (8%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+++ F + + + E+++ G D +TY ++ +G++D A+ +
Sbjct: 140 DVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVL 199
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E M + P +V+Y ++ L + ++KEA +V +QR P+ TYT+L+E
Sbjct: 200 ERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCND 256
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-----KENRLAL 239
+A+++ +M++ G +PD N+LI CK G I L M K N +
Sbjct: 257 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITH 316
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + T + D L + SP ++ N + F
Sbjct: 317 NI-ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINF------------------ 357
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L +K+ L +L + +S + ++ C ++ D A+ E V +
Sbjct: 358 LCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPD 417
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y L+ L K EI+ +++ G S + +I L + A ++
Sbjct: 418 IVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLE 477
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
L P+ TY+ L+ G D+A+KI+ M I PS T+N ++ GL
Sbjct: 478 EMRRKGLKPD----IITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533
Query: 474 EKLGRVSDA 482
K + S A
Sbjct: 534 CKAQQTSRA 542
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG D TY T+L + ++ + + + KG + +TY +V+ L+ G +
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 470
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV + EEM+ K P I++Y+ ++ L +V EA ++ +M + P+ TY +M
Sbjct: 471 YAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 530
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
L +A + A++ + M E G +P +A ILIE
Sbjct: 531 LGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 9/230 (3%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPP----MEKAWLFFNWVSRSRGFN 63
I K D A L N+P K + T N +L++ M+ L + + + G +
Sbjct: 288 ICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK--GCS 345
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
T+ +++ + + V E M + G ++++Y ++H +D A+
Sbjct: 346 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEY 405
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
E M + CYP IV+Y + L + +V A ++ ++ +G P TY +++ L +
Sbjct: 406 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
GK E A+E+ +M+ G++PD + L+ + G+ I I M+
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDME 515
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYT 70
K D A ++L+ + + D T N +L++ K + R R D TYT
Sbjct: 188 KSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYT 247
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+++ + + + M++KG D VTY +++ + G +D A+ M
Sbjct: 248 ILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 307
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C P ++++ ++ + R +A + +M+++G P+ T+ +L+ +L R A
Sbjct: 308 GCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRA 367
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCK 218
+++ KM + G P+ + N L+ C+
Sbjct: 368 IDVLEKMPKHGCVPNSLSYNPLLHGFCQ 395
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A N +S S+G + TY T++D + + + E M+ KG+ D +TY+
Sbjct: 434 VDAAVEILNQLS-SKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYS 492
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L G VD A+ I+ +M+ P+ V+Y A M L + A D M+++
Sbjct: 493 TLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 552
Query: 166 GLPPNCYTYTVLME 179
G P TYT+L+E
Sbjct: 553 GCKPTEATYTILIE 566
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 149/363 (41%), Gaps = 32/363 (8%)
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+++ L N ++E + MI +G P+ T L+ R+GK ++A I ++ +G
Sbjct: 112 HLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSG 171
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY-PVFKEALQTFKVADENDSL 260
PD N+LI CK+GE + +L M + Y + + + K+ + + L
Sbjct: 172 AVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVL 231
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI-LLKKK----NLVAIDSLLSG 315
Q+ + P+ I+ +E D + Q + L+ ++KK ++V + L++G
Sbjct: 232 DRQLQRECYPDVITYTILIEATCNDS----GVGQAMKLLDEMRKKGCKPDVVTYNVLING 287
Query: 316 IMDKSIQLDSAVI-----------------STIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
I K +LD A+ + I+ C R A ++ +
Sbjct: 288 IC-KEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ LI L + + +++E+M K G L+H ++ A +
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406
Query: 419 SLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++ + C TY L+ G D A++I + KG P L T+N ++ GL K
Sbjct: 407 EIMV-SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465
Query: 476 LGR 478
+G+
Sbjct: 466 VGK 468
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D TY +++ + R+ M G + +T+ ++ + + G
Sbjct: 270 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRW 329
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + +M K C P++V++ + L + A DV ++M + G PN +Y L
Sbjct: 330 MDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPL 389
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ + K + A+E M G PD N L+ CK G+ + IL +
Sbjct: 390 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQL 444
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 178/427 (41%), Gaps = 32/427 (7%)
Query: 104 YTSVMHW--LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
+ S +H L G+++ + E M + P +++ T+ ++ + + K+AT + +
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ G P+ TY VL+ ++G+ ++ALE+ +M V PD N ++ C +G+
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGK 223
Query: 222 TRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDN- 276
+ + +L + + Y + EA + LL ++ + P+ ++ N
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283
Query: 277 ------------DAVEFVTTDIE---GPLSIDQGLVL-ILLKKKNLVAIDSLLSGIMDKS 320
+A++F+ P I ++L + + + LLS ++ K
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
+ +I C R A+ E K +Y L+ + +
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGV 437
E +E M G + L+ L + A +I + L + C+ TY +I
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQL-SSKGCSPVLITYNTVIDG 462
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQAD 495
G + A+++ + M RKG+ P + T++ LL GL + G+V +A +I+ E SI+
Sbjct: 463 LTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPS 522
Query: 496 ALSKDAV 502
A++ +A+
Sbjct: 523 AVTYNAI 529
>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 376
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ +G D F Y+ M++ + + V M + G +A Y ++++ L A
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGAS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A+ ++ EM C PTI++Y + L N+ EA D+ KEM+++GL P+ TY+
Sbjct: 179 KFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L K E AL++++++ G +PD NILI C G+T+ + + M
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRW 298
Query: 236 RLALRYPVFKEALQTF-KVADENDSL-LWQ--VHPQFSPEFISDN 276
+ A ++ F K D ++L +W + P+ IS N
Sbjct: 299 KCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYN 343
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W N ++ M+ + ++ + ++ELM++ D++TY ++H
Sbjct: 48 WEMMGNEGNRSVSSFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKN 107
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G ++ ++++ E + K +Y+A + L + +A V +MI+ G PN + Y
Sbjct: 108 GXINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVY 167
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
L+ LV A K+E+A+ +F +M P N LI CK
Sbjct: 168 NTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLCK 211
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 170/418 (40%), Gaps = 67/418 (16%)
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+GD+DGA +++E+ + P V Y + F ++K+ ++++ M G + +
Sbjct: 3 SGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEG-NRSVSS 61
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ ++M L GK +E + I+ M+++ D IL+ CK G
Sbjct: 62 FNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNG------------- 108
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
++L ++A++ +L DA +
Sbjct: 109 ---------XINKSLHVLEMAEQKGGVL---------------DAFAY------------ 132
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
++ L K+ NL S+L+ ++ + ++ V +T+I + + A+ F
Sbjct: 133 SAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGT 192
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ + Y LI L K F + ++V+EM + G + V ++L+ L +
Sbjct: 193 VHCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVER 252
Query: 414 AAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A ++++ + P+ Q + LI S G +AL +Y M R P+L T N
Sbjct: 253 ALQLWNQVISKGFKPDVQ----MHNILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHN 308
Query: 468 VLLAGLEKLGRVSDAEIY--RKEKKSIQADALSKD----AVPMEEKICD-LLYGGDGV 518
L+ G K G + +A + R + ++ D +S + + +ICD +L+ D V
Sbjct: 309 TLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSV 366
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 68 TYTTMLD------IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
TY T+++ +FGEA + + M EKG+N +TY+ +M L V+ A+
Sbjct: 201 TYNTLINGLCKNEMFGEAYDL------VKEMLEKGLNPSVITYSMLMKGLCLDHKVERAL 254
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+W ++ K P + + + L + + A +Y M + PN T+ LME
Sbjct: 255 QLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWKCAPNLVTHNTLMEGF 314
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
+ G AL I++++ G++PD + NI ++ C IL L
Sbjct: 315 YKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLH 363
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/147 (17%), Positives = 65/147 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N TY+ ++ ++ ++ + KG D + ++H L + G
Sbjct: 228 KGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQR 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ M +C P +V++ M+ + + ++ A ++ +++ GL P+ +Y + ++
Sbjct: 288 ALSLYFXMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLK 347
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDK 206
L + +A+ + P K
Sbjct: 348 GLCSCNRICDAILFLHDSVRKKIVPTK 374
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V++ + E ++ DAV Y ++++ + +WE M E ++
Sbjct: 2 ESGDIDGAERVYKEIVESKVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMG-NEGNRSVS 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF +V E +++ M + + TY +L+ + G ++L +
Sbjct: 61 SFNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGXINKSLHVLEMA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
++ G D A + +I CK + +L M
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDM 155
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 193/473 (40%), Gaps = 26/473 (5%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEM--KGFGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E Y LI K + K
Sbjct: 287 APTDNSIFLRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAV 346
Query: 381 EIVEEMT------KAGHSLGVYLGA--LLIHRLGSARRPVPAAKIFSLLPE--DQKCTAT 430
++++++ + +L + A L+I L + + A + L + Q TA
Sbjct: 347 KLLDKLIEKDIILRPQSTLHLEPSAYNLMIEYLCNNGQASKAETLVRQLMKLGVQDPTAL 406
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 407 NTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 458
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 167/428 (39%), Gaps = 53/428 (12%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D TY T+L + VF+ M E GI + TY+ ++ G +
Sbjct: 246 RHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKL 305
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + +EM+ + P I SY ++ +KEA DV+K+M G PN TY++L
Sbjct: 306 EKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSIL 365
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + G+Y++ E+F +M+E+ +PD NILI + G
Sbjct: 366 LNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGG----------------- 408
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
FKE + F + V +I+ + +GLV
Sbjct: 409 -----YFKEVVTLFH---------------------------DLVDENIDPNMETYEGLV 436
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K +L + K I S S +IE D AL+AF ++
Sbjct: 437 FACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSK 496
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y +LI + + + I+ M + G S + +I + + A K
Sbjct: 497 STIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKA 556
Query: 418 FSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
F + E +C T ++GVY AG D++ + + + GI PS+ + ++LA
Sbjct: 557 FVEM-EKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYA 615
Query: 475 KLGRVSDA 482
K GR DA
Sbjct: 616 KNGRWDDA 623
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 95/464 (20%), Positives = 182/464 (39%), Gaps = 67/464 (14%)
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
++ V + GD ++ +++ M+ + C P YT + +L +++ ++++ EM
Sbjct: 115 FSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEM 174
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG-E 221
+G+ + ++YT L+ R G+YE +LE+ +M+ V P+ N +I C + +
Sbjct: 175 ASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLD 234
Query: 222 TRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDND 277
++ + M+ + + Y A + DE + + + PE + +
Sbjct: 235 WEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSY 294
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKN------------LVAIDSLLSGI---MDKSIQ 322
VE G L + + ++L + ++ L+ + L I MD Q
Sbjct: 295 IVETF-----GKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQ 349
Query: 323 LDSA-------VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ +A S ++ + H R D F + + T Y LI + +
Sbjct: 350 MQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409
Query: 376 FPKVAEIVEEMTKAG--HSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQKC 427
F +V + ++ ++ Y G L+ G A KI ++P +
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEG--LVFACGKGGLHEDAKKILFHMNGKGIVPSSK-- 465
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL-----AGLEK-----LG 477
Y+ LI Y A D+AL + TM G ++ T+N L+ GL K L
Sbjct: 466 --AYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILS 523
Query: 478 RVSDAEIYRKEK----------KSIQADALSKDAVPMEEKICDL 511
R+ + I R K +S Q + K V ME+ C+L
Sbjct: 524 RMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCEL 567
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 175/451 (38%), Gaps = 65/451 (14%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ T++ F R+ + + M KG + +TY +MH L +D A +
Sbjct: 279 DVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATD-VYKEMIQRGLPPNCYTYTVLMEYLVR 183
++ P +V + + N R+ EAT VY +MI G P+ +T++ L+ L +
Sbjct: 339 SKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCK 394
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR--- 240
G + ALE+ + M G +P+ ILI+ CK G+ LILR M +L
Sbjct: 395 KGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG 454
Query: 241 YPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
Y AL + K+ + D P+ + N I G +D+ +
Sbjct: 455 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSL-------IFGLCRVDEMEDAL 507
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + D +L G++ S+ + T+I AL + L+
Sbjct: 508 ALYR------DMVLEGVIANSVTFN-----TLIHAFLRRGEIQEALKLVNDMLFRGCPLD 556
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y LI L K K + EEM + G
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKG----------------------------- 587
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
L P C LI + +AG AL+ + M +G P + T+N L+ GL K GR+
Sbjct: 588 LTPSIITCNI----LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643
Query: 480 SDA-EIYRKEKKSIQADALSKDAVPMEEKIC 509
+A ++ K +QA+ + D++ IC
Sbjct: 644 QEALNLFEK----LQAEGIQPDSITYNTLIC 670
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T++ F I + M +G +D +TY ++ L G V+ + ++EEM
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P+I++ + +V A + ++MI RG P+ TY L+ L + G+
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+EAL +F K+Q G+QPD N LI C+ G +L EN
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVEN 691
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 26/291 (8%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G + TYT ++D F + ++ + M KG +++ V Y +++ L G +
Sbjct: 410 AKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIH 469
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A++++ EM K C P I ++ + + L D +++A +Y++M+ G+ N T+ L+
Sbjct: 470 EALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLI 529
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+R G+ +EAL++ + M G D+ N LI+ CK G + + M L
Sbjct: 530 HAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLT 589
Query: 239 LRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ F KV + + + +H FSP+ ++ N
Sbjct: 590 PSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNS----------------- 632
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
L+ L K+ + +L + + IQ DS +T+I C R+GA
Sbjct: 633 -LINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLC----REGAF 678
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/473 (20%), Positives = 181/473 (38%), Gaps = 45/473 (9%)
Query: 30 KWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
K + + ++L+ +E + F W +G+ H Y ++D G A + +
Sbjct: 68 KITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLL 127
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK-LKECYPTIVSYTAYMKILFL 148
M+E+GI + +M + AG A + +MK + C P+ SY + +L +
Sbjct: 128 LQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVV 187
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+ A++V+ +M+ +G+ PN YT+ ++M+ L + + A + M + G P+
Sbjct: 188 GNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMI 247
Query: 209 CNILIEKCCKAGETRTIILILRYM----------KENRLALRYPVFKEALQTFKVADEND 258
LI+ K + +L M N + + L+ K+ D
Sbjct: 248 YQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDR-- 305
Query: 259 SLLWQVHPQFSPEFISDNDAV-EFVTTDIEGPLSIDQGLVLIL-LKKKNLVAIDSLLSGI 316
+ F+P ND ++ + ID+ L+ + N+V ++L++G
Sbjct: 306 ----MILKGFTP-----NDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGF 356
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+ + R + ++ + + + L+ L K F
Sbjct: 357 VR------------------NGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLF 398
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTAL 434
E+V +M G + +LI + A I L T Y AL
Sbjct: 399 GSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNAL 458
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYR 486
I G +AL ++ M KG P + TFN L+ GL ++ + DA +YR
Sbjct: 459 ISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYR 511
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 161/418 (38%), Gaps = 55/418 (13%)
Query: 69 YTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+ T+++ F R++ + +V++ M G D T++++++ L G A+ + +M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C P + +YT + +++EA + +EM+ +G N Y L+ L + GK
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EAL++F +M G +PD N LI C+ E E+ LAL + E
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEM-----------EDALALYRDMVLEG 517
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
+ ++V F T L+ L++ +
Sbjct: 518 VIA--------------------------NSVTFNT------------LIHAFLRRGEIQ 539
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
L++ ++ + LD + +I+ C + L FE ++ L LI
Sbjct: 540 EALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILI 599
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--Q 425
E + +M G S + LI+ L R A +F L + Q
Sbjct: 600 NGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQ 659
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ TY LI G+ D A + G P+ T+N+L+ G+ S++E
Sbjct: 660 PDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVY---NFGKQSNSE 714
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY ++ + + +FE M KG+ +T +++ AG V
Sbjct: 551 RGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHN 610
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ +M + P IV+Y + + L R++EA ++++++ G+ P+ TY L+
Sbjct: 611 ALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLIC 670
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+L R G +++A + + E G P+ NIL+
Sbjct: 671 WLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 175/431 (40%), Gaps = 60/431 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + D ++ M+ R+ + M E+G +D T T ++ G V+
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
V + +M P ++++TA + L +K+A ++ +EM++RG PN YT+T L++
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337
Query: 180 YLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + G E+A +F K+ + G +P+ +I CK + ++L M+E L
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397
Query: 239 LRYPVFKEALQ------TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ + F A E L+ + FSP + N I+G
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGK--EGFSPNIYTYNAI-------IDG---- 444
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L KK +L LL+ + +Q D + ++ V+C + +L+ F +
Sbjct: 445 -------LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
K+ + +Y LI + + + EE SLG+ +
Sbjct: 498 KVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAV----SLGL----------------I 537
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
P K TYT++I Y G+ A+K+++ M G P T+ L++G
Sbjct: 538 PTKK-------------TYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584
Query: 473 LEKLGRVSDAE 483
L K ++ DA
Sbjct: 585 LCKESKLDDAR 595
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKA+ F + RS G+ + TYT M++ + + +++ + + MQE+G+ + TYT+
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ G+ A + + M + P I +Y A + L + EA + ++ G
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
L + TYT+LM R +L F+KM + G PD + LI C+ + +
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMK 522
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 169/433 (39%), Gaps = 55/433 (12%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ V VM++ N G + AVN+ EM+ + P+ + + + V+ A +++
Sbjct: 154 NEVMQCMVMNFAEN-GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMF 212
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
EM QRG+ P+C ++ +++ G+ EA + M E G D A C ++I+ C+
Sbjct: 213 VEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQK 272
Query: 220 GETRTIILILRYMKENRLALRYPVFKEAL----------QTFKVADENDSLLWQVHPQFS 269
G ++ M E LA F + Q F++ +E W+
Sbjct: 273 GYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK------ 326
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAV 327
P + TT I+G L KK A L + + +
Sbjct: 327 PNVYTH-------TTLIDG------------LCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I C + + A + + L Y LI K+ F + E+++ M
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427
Query: 388 KAGHSLGVYLGALLIHRL---GS---ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSA 441
K G S +Y +I L GS A R + + L Q TYT L+ V+
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL----QADGVTYTILMSVHCRQ 483
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDA 501
+++L + M + G P + ++ L++ + ++ KE + + +A+S
Sbjct: 484 ADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQM-------KESERLFEEAVSLGL 536
Query: 502 VPMEEKICDLLYG 514
+P ++ ++ G
Sbjct: 537 IPTKKTYTSMICG 549
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Query: 11 ILKYSTWDSAQDLLKNLPI---KWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNH 64
+ K + D A LL + + + D T ++ H ++ +FFN + + GF
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV-GFTP 503
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +YTT++ F K++ + +FE G+ TYTS++ G+ AV ++
Sbjct: 504 DIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M C P ++Y A + L ++ +A ++Y M+ +GL P T L +
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKK 623
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
A+ + ++++ + N L+ K C G+
Sbjct: 624 DDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGK 657
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%)
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
F E ++ + MQ +G+ T V+ G V+ A N++ EM + P
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
VS+ + RV EA M++RG + T T++++ + G + F
Sbjct: 224 CVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
KM E G+ P+ LI CK G + +L M
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/481 (19%), Positives = 200/481 (41%), Gaps = 72/481 (14%)
Query: 34 YTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
YT++ + +++ L F+ +++ G T+TT+++ + + +F+
Sbjct: 129 YTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDD 188
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M KG D TY ++++ L G+ A + ++M+ C P +V+Y+ + L +
Sbjct: 189 MVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRL 248
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V EA D++ M +G+ P+ +TYT L++ L + +++EA + ++M + PD N+
Sbjct: 249 VNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNV 308
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L++ CK G+ + +L+ M E + + + + LW
Sbjct: 309 LVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYS--------LW--------- 351
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLK---KKNLVAIDSLLSGIMDKSIQLDSAVI 328
D VE + L +++ K N+ + + L++G K+ ++D A
Sbjct: 352 ----TDVVE------------ARKLFHVMITKGCKPNIFSYNILINGYC-KAKRIDEA-- 392
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+ F + L +Y LI +L + ++ M
Sbjct: 393 ----------------MQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT 436
Query: 389 AGHSLGVYLGALLIHR------LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAG 442
G+ ++ ++L+ LG A R A + L P YT L+ +G
Sbjct: 437 NGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN----LVMYTILVHAMCKSG 492
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDA 501
+ A K++ + +G+ P + + ++ GL K G + +A E +R +++AD D
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFR----NMEADGCPPDE 548
Query: 502 V 502
+
Sbjct: 549 I 549
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 155/375 (41%), Gaps = 32/375 (8%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D +++ ++M+L P I + + +M RV V ++I+ GL P T+T L
Sbjct: 110 DVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTL 169
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L + G++ +A+E+F M G QPD N +I CK GET +L+ M+E
Sbjct: 170 INGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGC 229
Query: 238 A---LRYPVFKEALQTFKVADEN-DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ Y ++L ++ +E D + SP+ + T+ I+G
Sbjct: 230 QPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFT-------YTSLIQG----- 277
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L K +LL+ + +I D + +++ C + AL + +
Sbjct: 278 ------LCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
M + Y +L+ + ++ M G ++ +LI+ A+R
Sbjct: 332 MGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDE 391
Query: 414 AAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A ++F+ L P + +Y LI + G +A +++ MC G P L T++
Sbjct: 392 AMQLFNEMIHQGLTPNN----VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYS 447
Query: 468 VLLAGLEKLGRVSDA 482
+LL G K G + A
Sbjct: 448 ILLDGFCKQGYLGKA 462
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 2/209 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FN + +G + +Y T++ F + ++ + +F M G D TY+
Sbjct: 389 IDEAMQLFNEMIH-QGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYS 447
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ G + A ++ M+ P +V YT + + + K+A ++ E+ +
Sbjct: 448 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQ 507
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK-AGETRT 224
GL P+ YT ++ L + G +EALE F M+ G PD+ + N++I + E+R
Sbjct: 508 GLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRA 567
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKV 253
++L+ +A P E Q KV
Sbjct: 568 LLLVGEMRDRGFIADVRPCLSEVCQGKKV 596
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 189/483 (39%), Gaps = 74/483 (15%)
Query: 27 LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH---DRFTYTTMLDIFGEAKRIS 83
+P+ D+YT N VLK + K W + N + T+ T + F + +
Sbjct: 1 MPVAPDTYTYNTVLKGLC-IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLD 59
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M G D V Y+++++ S G VD A+++ M C P V Y A +
Sbjct: 60 RAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAAL 116
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K L + +R ++ ++ EM+++G PN T+++L+ L + + A+E+ +M++ G +
Sbjct: 117 KGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 176
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD NI+I + G + +L M AL F L+ F A+ W
Sbjct: 177 PDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALG---FNAVLKGFCRAER-----WH 228
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK----------KKNLVAIDSLL 313
+ + D+ + +T +I + GLV + ++V SLL
Sbjct: 229 DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLL 288
Query: 314 SGIMDK-----SIQL--------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+G ++ +IQL D + +++ C R + A V D
Sbjct: 289 NGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNE 348
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+ LI L + + E++E+M G + ++
Sbjct: 349 VTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIF------------------------ 384
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
TY ALI + G D ALK+ TM P ++N L GL + R
Sbjct: 385 ---------TYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQ 432
Query: 481 DAE 483
DAE
Sbjct: 433 DAE 435
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 17/232 (7%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS----RGFNHD----RFTY 69
D A LL ++ K D+ N VLK E+ W S + F D T+
Sbjct: 196 DDALRLLNSMVCKPDALGFNAVLKGFCRAER------WHDASELIAQMFRDDCPLIEMTF 249
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
++D+ + ++ VFE M D VTY+S+++ S G V+ A+ ++ M
Sbjct: 250 NILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP- 308
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
C P I SY A +K L R ++A ++ EM+ + PPN T+ +L+ L + G +
Sbjct: 309 --CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDR 366
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
A+E+ +M G PD N LI + G + +L M A+ Y
Sbjct: 367 AIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCKPDAISY 418
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAW-----LFFNWVSRSRGFNHDRFTYTTMLD 74
A L +++P K D ++ N VLK + W L V + N T+ +++
Sbjct: 300 AIQLFRSMPCKPDIFSYNAVLKGLCRAAR-WEDAGELIAEMVGKDCPPNE--VTFNILIN 356
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + V E M G D TY ++++ S G +D A+ + M C P
Sbjct: 357 SLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS---CKP 413
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV--RAG 185
+SY + +K L +R ++A ++ EM++ PN T+ L+ RAG
Sbjct: 414 DAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRAG 466
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 191/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFXWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVXLKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + ++ + E Y LI K + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ AAK +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSXYNSLVQSYLKKNEPXDAK 458
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 85/147 (57%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M EKG++++ + +T ++ GDV GA ++W EM+ + +P +V+++A++ L
Sbjct: 537 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGL 596
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V+EA +V+ EM+++GL PN + Y L+ + GK EAL++ M+ G+ PD N+
Sbjct: 597 VEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNM 656
Query: 212 LIEKCCKAGETRTIILILRYMKENRLA 238
+I CK G R+ I + M + L+
Sbjct: 657 IIGGLCKQGRMRSAINVFMDMHQTGLS 683
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 172/445 (38%), Gaps = 31/445 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ F Y +++ R S F LM E+G N VT+ +V++ G+V A ++
Sbjct: 300 NAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLF 359
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ +K P + Y M + +A +Y+EM ++G+ P+ T+ +L+ +
Sbjct: 360 DGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKY 419
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G+ E+ + + G+ PD++ +I + C AG + L M E L+ F
Sbjct: 420 GREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAF 479
Query: 245 KEALQTFKVADENDSLL----WQVHPQFSPE---------FISDN----DAVEFVTTDIE 287
+ + A D VH +P +S N +A E + IE
Sbjct: 480 NSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE 539
Query: 288 GPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
LS++ +LL K+ ++V SL + + I D S I+ +
Sbjct: 540 KGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEE 599
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A F ++ L AY +LI K + ++ + M G ++ ++I
Sbjct: 600 AYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIG 659
Query: 404 RLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
L R A +F L P+ TY LI Y A A + M
Sbjct: 660 GLCKQGRMRSAINVFMDMHQTGLSPD----IITYNTLINGYCKAFDMVNADNLVNRMYAS 715
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA 482
G +P L T+N+ + G R++ A
Sbjct: 716 GSNPDLTTYNIRIHGFCSSRRMNRA 740
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + + +T +LD F + + + ++ M+ +GI D V +++ + LS G V+
Sbjct: 540 KGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEE 599
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N++ EM K P +Y + + ++ EA + K M RGL P+ +T +++
Sbjct: 600 AYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIG 659
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L + G+ A+ +F M + G+ PD N LI CKA
Sbjct: 660 GLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKA 699
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 182/447 (40%), Gaps = 37/447 (8%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
W F V R RG ++T++ ++ F I + + LM + +A Y V
Sbjct: 249 NVWKLFKDVIR-RGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIV 307
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
++ G A+ + M + C PT+V++ + V EA ++ + + G
Sbjct: 308 INACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGF 367
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
PN Y LM V+ + ++A ++ +M++ G+ PD NIL+ K G
Sbjct: 368 SPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDR 427
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDS----LLWQVHPQFSPEFISDNDAV-EFV 282
+L+ + L +F ++ A D L+ + SP I+ N + +
Sbjct: 428 LLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYS 487
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI-MDKSIQLDSAVISTIIEVNCDHRRR 341
+E L++ + SLL G+ ++ +Q + +I +IE +
Sbjct: 488 QAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE-------K 540
Query: 342 DGALLAFEYSVKMDLNLER---TAYLALIGILIKLNTFPKV---AEIVEEMTKAGHSLGV 395
++ ++V +D +R +L G + + FP V + ++ ++K G
Sbjct: 541 GLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEA 600
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
Y L + R G L+P + Y +LI + G ++ALK+ K M
Sbjct: 601 YNVFLEMLRKG-------------LIPNN----FAYNSLICGFCKCGKLNEALKLEKVMR 643
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+G+ P + T N+++ GL K GR+ A
Sbjct: 644 HRGLLPDIFTTNMIIGGLCKQGRMRSA 670
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D ++ +D + + VF M KG+ + Y S++ G ++
Sbjct: 575 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE 634
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + + M+ + P I + + L R++ A +V+ +M Q GL P+ TY L+
Sbjct: 635 ALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLIN 694
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+A A + ++M +G PD NI I C + +L+L
Sbjct: 695 GYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLML 744
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 1/165 (0%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V R RG D FT ++ + R+ S VF M + G++ D +TY ++++ A
Sbjct: 641 VMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAF 700
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
D+ A N+ M P + +Y + + R+ A + E++ G+ PN TY
Sbjct: 701 DMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYN 760
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
++ V + + A+ + +++ + P+ N+L+ + K G
Sbjct: 761 SMLNG-VCSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQG 804
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 84/188 (44%), Gaps = 1/188 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+ F + R +G + F Y +++ F + +++ + ++M+ +G+ D T
Sbjct: 597 VEEAYNVFLEMLR-KGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTN 655
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G + A+N++ +M P I++Y + + A ++ M
Sbjct: 656 MIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYAS 715
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ TY + + + + A+ + ++ AG+ P+ N ++ C R +
Sbjct: 716 GSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAM 775
Query: 226 ILILRYMK 233
IL R +K
Sbjct: 776 ILTARLLK 783
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 140/410 (34%), Gaps = 31/410 (7%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
D S+M NA A+ I M+ P+ K+L ++
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
K++I+RG P YT++ ++ R G + M + +P+ A NI+I CC
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISD 275
G T + M E F + F V + FSP I
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS---------------------LLS 314
N + E IDQ +L +K +A D LL
Sbjct: 375 NTLMNGYVKMRE----IDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLK 430
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
I + D ++ + C R D A+ ++ L+ A+ ++I +
Sbjct: 431 DISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAG 490
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYT 432
K E + M G + + L+ L R A ++ + E +T
Sbjct: 491 LEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFT 550
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
L+ +F G A ++ M R+GI P + F+ + GL K G V +A
Sbjct: 551 VLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEA 600
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 199/450 (44%), Gaps = 27/450 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + + T+++ + + S +F+ M+++G + ++VT++ ++ W G+++
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ +++M++ P++ ++ + +EA ++ E + GL N + ++
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTIL 450
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+L + GK +EA E+ SKM+ G+ P+ + N ++ C+ ++ + E L
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
Y + + F+ DE ++L +V + I N V T I G + Q
Sbjct: 511 PNNYTYSILIDG--CFRNHDEQNAL--EVVNHMTSSNIEVNGVV--YQTIINGLCKVGQ- 563
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
K + L+A + I +K + + ++II+ D A+ A+E
Sbjct: 564 ----TSKARELLA-----NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
++ Y +L+ L K N + E+ +EM G L + LI A+
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+FS L E+ Y +LI + + G+ AL +YK M + G+ LGT+ L+ GL
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Query: 474 EKLGR-VSDAEIYRKEKKSIQADALSKDAV 502
K G + +E+Y + +QA L D +
Sbjct: 735 LKDGNLILASELYTE----MQAVGLVPDEI 760
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 179/476 (37%), Gaps = 104/476 (21%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNH 64
+ K D A +LL + I + + N V+ H M+ A + F+ + +G
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI-LEKGLKP 511
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA---- 120
+ +TY+ ++D + V M I ++ V Y ++++ L G A
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N+ EE +L C + +SY + + F + A Y+EM G+ PN TYT LM
Sbjct: 572 ANMIEEKRL--CV-SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + + ++ALE+ +M+ GV+ D A LI+ CK + + + E L
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
P++ + F+
Sbjct: 689 QPIYNSLISGFR------------------------------------------------ 700
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL-LAFEYSVKMD---L 356
N+VA L ++ ++ D +T+I D +DG L LA E +M L
Sbjct: 701 -NLGNMVAALDLYKKMLKDGLRCDLGTYTTLI----DGLLKDGNLILASELYTEMQAVGL 755
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ Y ++ L K F KV ++ EEM K + V +
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI------------------- 796
Query: 417 IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
Y A+I ++ G+ D+A +++ M KGI P TF++L++G
Sbjct: 797 --------------YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 112/511 (21%), Positives = 208/511 (40%), Gaps = 71/511 (13%)
Query: 30 KWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDI-------FGEAKRI 82
K D+ ++ +L E A F+NW RG D + ++ I +G A +
Sbjct: 70 KDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDL 129
Query: 83 SSMKYV----------------FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
++YV + + G +++ + +++ S D AV+I +
Sbjct: 130 L-IRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQ 188
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + P + L + + EA ++Y M+ G+ + T +LM +R K
Sbjct: 189 MLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEK 248
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL--RYPVF 244
EALE+ S+ E G +PD ++ ++ CCK + +LR MKE +L + +
Sbjct: 249 PAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYT 308
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV--TTDIEGPL-SIDQGLVLILL 301
L + K + +D++ + E +SD ++ V T+ I G + D L+L
Sbjct: 309 SVILASVKQGNMDDAI------RLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLF 362
Query: 302 KK-------KNLVAIDSLL-----SGIMDKSIQ---------LDSAV--ISTIIEVNCDH 338
K N V L+ +G M+K+++ L +V + TII+
Sbjct: 363 DKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG 422
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYL--ALIGILIKLNTFPKVAEIVEEMTKAGHSLGV- 395
++ + AL F+ S + L ++ ++ L K + E++ +M G V
Sbjct: 423 QKHEEALKLFDESFETGL---ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 396 -YLGALLIHRLGSARRPVPAAKI-FSLLPED--QKCTATYTALIGVYFSAGSADKALKIY 451
Y +L H ++ + A+I FS + E + TY+ LI F AL++
Sbjct: 480 SYNNVMLGH---CRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M I + + ++ GL K+G+ S A
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D +T N ++ H ++KA F +SR RG TYT+++ + ++ +
Sbjct: 213 DVFTYNILINGHCKEGNVKKALEIFENMSR-RGVRATVVTYTSLIYALSKKGQVQETDKL 271
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ +GI D V Y ++++ S +G++D A I EM+ K P V+Y M+ L L
Sbjct: 272 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 331
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
RV EA + EM +RG+ P+ TY L+ G ++AL I ++M G P
Sbjct: 332 LGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 391
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
N LI+ CK G+ +++ M EN + + ++ DE
Sbjct: 392 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 160/410 (39%), Gaps = 60/410 (14%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
T+ ++ L +AG A+ + +M P V+Y + RV+ A D+ +E
Sbjct: 42 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 97
Query: 162 MIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKA 219
M +RG + PN YTY ++ + G+ +EA+++F +M G V+P+ N LI C
Sbjct: 98 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157
Query: 220 GETRTIILILRYMKENRLALR---YPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISD 275
G+ T +L M E +A+ Y + AL E L+ ++ + +P+ +
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217
Query: 276 N-------------DAVEFVTT----DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
N A+E + + L+ L KK + D L +
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ I+ D + + +I + D A K + + Y L+ L L +
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVY 438
++++EMTK G Q TY LI Y
Sbjct: 338 ARKLIDEMTKRGI---------------------------------QPDLVTYNTLISGY 364
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G AL+I M KG +P+L T+N L+ GL K G+ DAE KE
Sbjct: 365 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 414
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF 76
A +LL+ +P + ++ T N V+ + ++ A + G +++TY T++ +
Sbjct: 60 ALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 118
Query: 77 GEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ R+ VF+ M KG + +AV Y +++ + G +D A+ + M + T
Sbjct: 119 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 178
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ +Y + LF++ R EA ++ +EM +GL P+ +TY +L+ + G ++ALEIF
Sbjct: 179 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 238
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETR 223
M GV+ LI K G+ +
Sbjct: 239 NMSRRGVRATVVTYTSLIYALSKKGQVQ 266
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TY ++ R + + E M KG+ D TY +++ G+V
Sbjct: 173 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 232
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+E M + T+V+YT+ + L +V+E ++ E ++RG+ P+ Y L+
Sbjct: 233 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 292
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII 226
+G + A EI +M++ + PD N L+ C G E R +I
Sbjct: 293 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 4/212 (1%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ + + ++ + + M E+G+ + TY ++H L G A + EEM
Sbjct: 147 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 206
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K P + +Y + VK+A ++++ M +RG+ TYT L+ L + G+ +
Sbjct: 207 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQ 266
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFK 245
E ++F + G++PD N LI +G I+ M++ R+A + Y
Sbjct: 267 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 326
Query: 246 EALQTFKVADENDSLLWQVHPQ-FSPEFISDN 276
L DE L+ ++ + P+ ++ N
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYN 358
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 4/182 (2%)
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
++ ++ + + +I CD + D ALL + V+ + + Y L+ L +
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 199
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVY 438
E+VEEM G + V+ +LI+ A +IF + + TYT+LI
Sbjct: 200 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL 259
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQADA 496
G + K++ R+GI P L +N L+ G + A EI + EKK I D
Sbjct: 260 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 319
Query: 497 LS 498
++
Sbjct: 320 VT 321
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 180/456 (39%), Gaps = 62/456 (13%)
Query: 68 TYTTMLDIF--GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
+Y +LDI G+ R++ VF M +G++ T+ VM L +VD A ++
Sbjct: 172 SYNVVLDILVDGDCPRVAP--NVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLR 229
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+M C P V Y + L N+RV EA + ++M P+ T+ ++ L RAG
Sbjct: 230 DMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAG 289
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+ EA ++ +M G D L+ C+ G+ +L + L +
Sbjct: 290 RIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLIS 349
Query: 246 EALQTFKVADENDSLLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + + + D LL+ V + P DA F I+G L+KK
Sbjct: 350 GYVASGRFEEAKD-LLYNNMVIAGYEP------DAYTF-NIMIDG-----------LVKK 390
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
LV+ LL+ ++ K + + + +I C R + A L+L Y
Sbjct: 391 GYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGY 450
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF----- 418
LI L K + ++ EM+ G +Y LI+ L + A ++
Sbjct: 451 NCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFL 510
Query: 419 ---------------SLLPED--------------QKC---TATYTALIGVYFSAGSADK 446
+ L D + C TY LI G+ +K
Sbjct: 511 EGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
L +++ M KGI P++ + N+L++GL + G+V+DA
Sbjct: 571 GLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDA 606
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 30 KWDSYT----VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
K D YT +N + K H E L+ + G + TY T++ F I
Sbjct: 479 KPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE--GVIANTVTYNTLVHAFLMRDSIQQA 536
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ + M +G +D +TY ++ L G V+ + ++EEM K +PTI+S +
Sbjct: 537 FKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISG 596
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L +V +A ++MI RGL P+ TY L+ L + G +EA +F+K+Q G++PD
Sbjct: 597 LCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPD 656
Query: 206 KAACNILIEKCCKAGETRTIILIL 229
N LI + C G L+L
Sbjct: 657 AITYNTLISRHCHEGMFNDACLLL 680
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 182/471 (38%), Gaps = 81/471 (17%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++ A RI + + M +G + DA+TY +MH L G VD A +
Sbjct: 274 DVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALL 333
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV-YKEMIQRGLPPNCYTYTVLMEYLVR 183
++ P V Y + + R +EA D+ Y M+ G P+ YT+ ++++ LV+
Sbjct: 334 NKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVK 389
Query: 184 AGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
G ALE+ ++M +P+ ILI CK G I+ M L+L V
Sbjct: 390 KGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLN-TV 448
Query: 244 FKEALQTFKVADENDSLLWQVHPQFS-----PEFISDNDAVEFVTTD--IEGPLSIDQGL 296
L D N Q+ + S P+ + N + + + +E LS+
Sbjct: 449 GYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYH-- 506
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM-- 354
D L G++ ++ ++ V + ++ RD AF+ +M
Sbjct: 507 -------------DMFLEGVIANTVTYNTLVHAFLM--------RDSIQQAFKLVDEMLF 545
Query: 355 -DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
L+ Y LI L K K + EEM G
Sbjct: 546 RGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG----------------------- 582
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ P C + L G + ALK + M +G+ P + T+N L+ GL
Sbjct: 583 ------IFPTIISCNILISGLC----RTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGL 632
Query: 474 EKLGRVSDA-EIYRK-EKKSIQADALSKDAV-------PMEEKICDLLYGG 515
K+G V +A ++ K + + I+ DA++ + + M C LLY G
Sbjct: 633 CKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKG 683
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 156/372 (41%), Gaps = 40/372 (10%)
Query: 17 WDSAQDLLKNLPI----KWDSYTVNQVLKTHPPMEKAWL-----FFNWVSRSRGFNHDRF 67
++ A+DLL N + + D+YT N ++ ++K +L N + R F +
Sbjct: 357 FEEAKDLLYNNMVIAGYEPDAYTFNIMIDGL--VKKGYLVSALELLNEMVAKR-FEPNVI 413
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT +++ F + R+ + M KG++++ V Y ++ L G+++ A+ ++ EM
Sbjct: 414 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM 473
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C P I ++ + + L N +++EA +Y +M G+ N TY L+ +
Sbjct: 474 SGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSI 533
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP----- 242
++A ++ +M G D N LI+ CK G + + M + +P
Sbjct: 534 QQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI---FPTIISC 590
Query: 243 --VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ +T KV D L +H +P+ ++ N S+ GL
Sbjct: 591 NILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYN--------------SLINGLC--- 633
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K ++ +L + + + I+ D+ +T+I +C + A L V
Sbjct: 634 -KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNE 692
Query: 361 TAYLALIGILIK 372
+ LI ++K
Sbjct: 693 VTWSILINYIVK 704
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 173/435 (39%), Gaps = 22/435 (5%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
F +G++H ++D G ++ + + M+++G+ + +M
Sbjct: 85 LFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHY 144
Query: 112 SNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
AG A + +M + C PT SY + IL D + A +V+ +M+ RG+ P
Sbjct: 145 GKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPT 204
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
YT+ V+M+ L + + A + M + G P+ LI C E + L+
Sbjct: 205 VYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALC---ENNRVSEALQ 261
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+++ L P +QTF ++H + D + +TD
Sbjct: 262 LLEDMFLMCCEP----DVQTFNDVIHGLCRAGRIHEAAK---LLDRMLLRGFSTD----- 309
Query: 291 SIDQGLVLILLKKKNLV-AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
++ G ++ L + V +LL+ I + + L + +IS + R + L +
Sbjct: 310 ALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVA---SGRFEEAKDLLYN 366
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
V + + +I L+K E++ EM V +LI+
Sbjct: 367 NMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQG 426
Query: 410 RPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
R AA+I + + T Y LI G+ ++AL+++ M KG P + TFN
Sbjct: 427 RLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFN 486
Query: 468 VLLAGLEKLGRVSDA 482
L+ GL K ++ +A
Sbjct: 487 SLINGLCKNHKMEEA 501
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG-----INIDAVTYTSVMHWLSNAG 115
G + TY +L F A ++ F M+++G D V+YT+++H L AG
Sbjct: 234 GIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAG 293
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+D A +++EM + C PTI +Y A ++++ V++A V+ +MI++ PN TYT
Sbjct: 294 QLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYT 353
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
VL+ L GK + A+++ +M+ G +P N+LI + GE
Sbjct: 354 VLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGE 399
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 5/173 (2%)
Query: 46 MEKAWLFFNWV----SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDA 101
++ AW FF + S+ D +YTT++ G A ++ + +F+ M ++G
Sbjct: 255 LQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTI 314
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
TY +++ + G+V+ AV ++++M K+ P +V+YT ++ L ++ A + +
Sbjct: 315 ATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMER 374
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILI 213
M G P TY VL+ Y G+ ++AL +F +M + P++ NI+I
Sbjct: 375 MKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVI 427
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+IH LG A + A K+F + ++ ATY ALI V G+ + A+ ++ M RK
Sbjct: 285 IIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKD 344
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
P++ T+ VL+ GL +G++ A
Sbjct: 345 YIPNVVTYTVLIRGLCHVGKIDRA 368
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 423 EDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+D+ C +YT +I AG DKA K++ M ++G P++ T+N L+ + K G V
Sbjct: 271 KDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNV 330
Query: 480 SDAEIYRKEKKSIQADALSKDAVP 503
DA ++ D + KD +P
Sbjct: 331 EDAV-------TVFDDMIRKDYIP 347
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++R PP+ TY L + R AL++ +M E+G+ P K N++++ +AG+
Sbjct: 196 LERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQ 254
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 174/408 (42%), Gaps = 55/408 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +L + + + + VF M++ G AV Y + + L GD AV I+E M
Sbjct: 243 TYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERM 302
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C P+ +YT + + + A V+ EM + PN T+T L+ R G
Sbjct: 303 KRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLC 362
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVF 244
E+A EIF ++QEAG++PD A N L+E +AG I ++++M Y +
Sbjct: 363 EKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIM 422
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+A + E+ +++V + +T ++ + L+L +
Sbjct: 423 VDAYGRAGL-HEDAQAVFEVMKRLG------------ITPTMKSHM-----LLLSAYSRA 464
Query: 305 NLVA-IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
VA + +++ + I+ D+ V+++++ + G L FE ++ +E+ Y
Sbjct: 465 GKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLY-------GRLGQFEKMEEVLTAMEKGPY 517
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
A I L + +Y A R+ R +PA +L+P+
Sbjct: 518 PADISTYNIL-------------------INIYGRAGFFARMEELFRSLPAR---NLIPD 555
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
T+T+ IG Y ++ L++++ M G +P GT VLL+
Sbjct: 556 ----VVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLS 599
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA F + R GF Y +D + +FE M+ TYT
Sbjct: 257 LEKAEAVFAEM-RKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYT 315
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ A A+ ++ EM+ ++C P I ++TA + ++A ++++++ +
Sbjct: 316 MLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEA 375
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
GL P+ Y Y LME RAG A EIFS MQ G +PD+A+ NI+++ +AG
Sbjct: 376 GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 430
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKA F + + G D + Y +++ + A +F LMQ G D +Y
Sbjct: 363 EKAEEIFEQLQEA-GLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNI 421
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ AG + A ++E MK PT+ S+ + +V + ++ +M + G
Sbjct: 422 MVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG 481
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ P+ + ++ R G++E+ E+ + M++ D + NILI +AG
Sbjct: 482 IKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAG 535
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 41/251 (16%)
Query: 24 LKNLPIKWDSYTVNQVLKTHP----PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
L+ ++ D Y N +++ + P A +F + + G DR +Y M+D +G A
Sbjct: 372 LQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFS--LMQHMGCEPDRASYNIMVDAYGRA 429
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM------------ 127
+ VFE+M+ GI ++ ++ S AG V I +M
Sbjct: 430 GLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVL 489
Query: 128 --------------KLKEC--------YPT-IVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
K++E YP I +Y + I ++++ +
Sbjct: 490 NSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPA 549
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
R L P+ T+T + R +Y LE+F +M +AG PD +L+ C + +
Sbjct: 550 RNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQE 609
Query: 225 IILILRYMKEN 235
+ ++R M ++
Sbjct: 610 VTTVIRTMHKD 620
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
+ AL+ + K EI E++ +AG VY L+ A P AA+IFSL+
Sbjct: 349 FTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM- 407
Query: 423 EDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ C A+Y ++ Y AG + A +++ M R GI P++ + +LL+ + G+V
Sbjct: 408 QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 467
Query: 480 SDAE--IYRKEKKSIQADAL 497
+ E + + K I+ D
Sbjct: 468 AKCEEIVNQMHKSGIKPDTF 487
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
Y A I L+K K EI E M + +LI+ G A + A K+F +
Sbjct: 279 YNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEM- 337
Query: 423 EDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
QKC T+TAL+ + G +KA +I++ + G+ P + +N L+ + G
Sbjct: 338 RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAG 395
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
K + EM K G + I L A +IF + D Q TATYT LI
Sbjct: 259 KAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLI 318
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+Y A + ALK++ M + P++ TF L+ + G AE
Sbjct: 319 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAE 366
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 192/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F + + + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNTITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E Y LI K+ + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNPDAAADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ A K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 458
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 188/501 (37%), Gaps = 97/501 (19%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
+ W D+ + + IK + YT N VL ++KA F + S G TY T
Sbjct: 209 NAWVFYADMYR-MEIKSNVYTFNIMINVLCKEGKLKKAKGFLG-IMESFGIKPTIVTYNT 266
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++ + RI + + M+ KG D TY ++ W+ N G A + EMK
Sbjct: 267 LVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIG 323
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P VSY ++ N ++ A EM+++G+ P YTY L+ L K E A
Sbjct: 324 LVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 383
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+ +++E G+ D NI+I C+ G+ + + F
Sbjct: 384 ILIREIREKGIVLDSVTYNIVINGYCQHGDAK-------------------------KAF 418
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
+ D E +T I+ L+ +L ++ D
Sbjct: 419 ALHD------------------------EMMTDGIKPTQFTYTSLIYVLCRRNKTREADE 454
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
L ++ K ++ D +++T+++ +C D A + +M+++ + Y L+ L
Sbjct: 455 LFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLC 514
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATY 431
F + E++ EM RR + I +Y
Sbjct: 515 GEGKFEEARELMGEM---------------------KRRGIKPDHI------------SY 541
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
LI Y G A + M G +P+L T+N LL GL K D E+ + +
Sbjct: 542 NTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSK---NQDGELAEELLRE 598
Query: 492 IQADALSKDAVPMEEKICDLL 512
++++ + VP + C ++
Sbjct: 599 MKSEGI----VPNDSSFCSVI 615
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 172/447 (38%), Gaps = 68/447 (15%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ + +GF+ T +L + RI + + M I + T+ +++ L
Sbjct: 180 YLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKE 239
Query: 115 GDVD---GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G + G + I E +K PTIV+Y ++ L R++ A + EM +G P+
Sbjct: 240 GKLKKAKGFLGIMESFGIK---PTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDL 296
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
TY ++ ++ G+ A E+ +M+ G+ PD + NILI C G+ T
Sbjct: 297 QTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLET------- 346
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
F DE V P F + N T I G
Sbjct: 347 ------------------AFAYRDE------MVKQGMVPTFYTYN-------TLIHG--- 372
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
L + + A + L+ I +K I LDS + +I C H A +
Sbjct: 373 --------LFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEM 424
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG-VYLGALLIHRLGSARR 410
+ + + Y +LI +L + N + E+ E++ G V + L+ +
Sbjct: 425 MTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGN- 483
Query: 411 PVPAAKIFSLLPEDQKCT-----ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+ FSLL E + TY L+ G ++A ++ M R+GI P +
Sbjct: 484 ---MDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 540
Query: 466 FNVLLAGLEKLGRVSDAEIYRKEKKSI 492
+N L++G K G A I R E S+
Sbjct: 541 YNTLISGYSKKGDTKHAFIVRDEMLSL 567
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 125/269 (46%), Gaps = 19/269 (7%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+TY T++ +I + + + ++EKGI +D+VTY V++ GD A + +E
Sbjct: 364 YTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDE 423
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M PT +YT+ + +L ++ +EA +++++++ +G+ P+ LM+ G
Sbjct: 424 MMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGN 483
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILR-------YMKENR 236
+ A + +M + PD N L+ C G E R ++ ++ ++ N
Sbjct: 484 MDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 543
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
L Y + F V DE SL F+P ++ N ++ ++ + +G L+ +
Sbjct: 544 LISGYSKKGDTKHAFIVRDEMLSL------GFNPTLLTYNALLKGLSKNQDGELAEE--- 594
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
+L +K + +V DS +++ + D+
Sbjct: 595 LLREMKSEGIVPNDSSFCSVIEAMSKSDN 623
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 4/230 (1%)
Query: 29 IKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
I DS T N V+ H +KA+ + + + G +FTYT+++ + +
Sbjct: 394 IVLDSVTYNIVINGYCQHGDAKKAFALHDEM-MTDGIKPTQFTYTSLIYVLCRRNKTREA 452
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+FE + KG+ D V ++M G++D A ++ +EM P V+Y M+
Sbjct: 453 DELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRG 512
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + +EA ++ EM +RG+ P+ +Y L+ + G + A + +M G P
Sbjct: 513 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPT 572
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
N L++ K + +LR MK + F ++ +D
Sbjct: 573 LLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSD 622
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 191/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+ + +I +C D A + +++ + E Y LI K + K
Sbjct: 287 APTDNXIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ A K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 458
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 181/430 (42%), Gaps = 24/430 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++GF FTY+ + ++ RI ++ + M + G + D +++L +
Sbjct: 221 AKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLP 280
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + E+M+ K P +V+Y + L N + EA +++EM++R L P+ ++ L+
Sbjct: 281 DALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALI 340
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + K +EA E+ S+M ++ N LI +AG I+ +M+ N
Sbjct: 341 FGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCE 400
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y + T + ++ + L+ ++ +P+ S N
Sbjct: 401 PDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQ----------------- 443
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ L K L + +S M+ D+ + +I+ C ++ AL F+
Sbjct: 444 -LLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYK 502
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + Y LI L + + E+ E+M A V L +++H L A
Sbjct: 503 GMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRA 562
Query: 415 AKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
IFS + + + T T+ LI A +AL ++K M +G+ P TF L++G
Sbjct: 563 QTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISG 622
Query: 473 LEKLGRVSDA 482
L G+ + A
Sbjct: 623 LLDEGKSTLA 632
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/484 (20%), Positives = 183/484 (37%), Gaps = 25/484 (5%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
L+ L ++ D VN V++ E A F+ W GF+H +F ++ + +
Sbjct: 81 LERLDVELDPIVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNFA 140
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ ++ +G+ + Y ++ AG D + ++EM + C V Y Y+
Sbjct: 141 LLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYI 200
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+L N Y + +G +TY+ + L ++ + E E+ M + G
Sbjct: 201 GVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCS 260
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSL 260
PD ACNI I CK + ++ M+ + + Y L K E
Sbjct: 261 PDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIG- 319
Query: 261 LWQ--VHPQFSPEFIS---------DNDAVE--------FVTTDIEGPLSIDQGLVLILL 301
LW+ V P+ S N+ V+ +T DIE + I L+
Sbjct: 320 LWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFW 379
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
+ ++ ++S + + D + ++ C + A +N +R
Sbjct: 380 RAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRY 439
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
+Y L+ L K + K V + + G +LI ++ A ++F +
Sbjct: 440 SYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEM 499
Query: 422 PED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
Q TY LI FS G + A ++++ M I P++ +N++L L K+G
Sbjct: 500 GYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHF 559
Query: 480 SDAE 483
A+
Sbjct: 560 KRAQ 563
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 6/225 (2%)
Query: 32 DSYTVNQVLK----THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
D Y+ NQ+LK TH ++KA+ F + GF D + ++D F + K++ S
Sbjct: 437 DRYSYNQLLKGLCKTHQ-LDKAFAFVSDHMEVGGFC-DTVSCNILIDAFCKTKKVKSALE 494
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+F+ M KG+ DAVTY ++++ L + G + A ++E+M + P + Y + L
Sbjct: 495 LFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLC 554
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
K A ++ MIQ+ + P+ T+ L+ +L + + EAL +F M+ GV+PD
Sbjct: 555 KVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTL 614
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
LI G++ + YM EN + L V + + K
Sbjct: 615 TFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVLK 659
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 143/365 (39%), Gaps = 58/365 (15%)
Query: 141 AYM-KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
AY+ +LF++ ++ + +G+ + Y +L+ VRAGK++ +E F +M
Sbjct: 127 AYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVM 186
Query: 200 AGVQPDKAACN----ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
+G + N +L++ CC L+ +Y + LA + L F +
Sbjct: 187 SGCREFGVDYNRYIGVLVKNCC-------FDLVEKYY-DMALAKGF-----CLTPFTYSR 233
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
+L + E + D D + + DI + L K+ L ++
Sbjct: 234 WISALCQSNRIELVQELLVDMDKLG-CSPDIWAC----NIYIYYLCKQNRLPDALQMVEK 288
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ K D T++ CD+++ A+ +E VK DL + + ALI L K N
Sbjct: 289 MRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNK 348
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALI 435
+ E+ A+++ +L E C Y ALI
Sbjct: 349 VDEAFEL-------------------------------ASRMLTLDIELSVCI--YNALI 375
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQ 493
++ AGS DKA KI M G P + T+N+LL +G + AE I + E +
Sbjct: 376 SGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVN 435
Query: 494 ADALS 498
D S
Sbjct: 436 PDRYS 440
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D+ ++ ++ + +R + F+ ++++ D V YTS++H AG++ A
Sbjct: 1243 GCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEA 1301
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EMK+ P + +Y+ + L + ++ A DV+ EMI G PN T+ LM
Sbjct: 1302 ERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRV 1361
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
V+AG+ E+ L+++++M+ G PD N LIE C+ + IL +K+
Sbjct: 1362 HVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK 1415
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 34/224 (15%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
P + FFNW + F H Y M+D+ G+ ++ + +LM+ + + I T+
Sbjct: 1157 PFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETF 1216
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL--------------FLND 150
T ++ AG AV+ + M+ C P ++++ + L L D
Sbjct: 1217 TILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD 1276
Query: 151 R--------------------VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
R + EA V+ EM G+ PN YTY+++++ L R+G+ A
Sbjct: 1277 RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRA 1336
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++FS+M + G P+ N L+ KAG T ++ + MK
Sbjct: 1337 HDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKR 1380
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 32 DSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
++ T N +++ H EK +N + R G D TY +++ + +
Sbjct: 1351 NAITFNNLMRVHVKAGRTEKVLQVYNQMKR-LGCPPDAITYNFLIESHCRDDNLEEAVKI 1409
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
++ KG N++A ++ + +S GDV+ A ++ +MK +C P V+Y M++
Sbjct: 1410 LNSVK-KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFAD 1468
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM-QEAGVQPDKA 207
+ KEM + + PN TY VL+ G + A F +M +E ++P
Sbjct: 1469 KKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLP 1528
Query: 208 ACNILIEKCCKAGETR 223
+++++ KAG+ +
Sbjct: 1529 VYEMVLQQLRKAGQLK 1544
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +TY+ ++D + +I+ VF M + G + +A+T+ ++M AG +
Sbjct: 1312 GIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKV 1371
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV---------------------- 158
+ ++ +MK C P ++Y ++ +D ++EA +
Sbjct: 1372 LQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCI 1431
Query: 159 ------------YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ +M PN TY +LM + L++ +M E ++P+
Sbjct: 1432 SKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNA 1491
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENR-LALRYPVFKEALQTFKVADE 256
+LI C G + M E + L PV++ LQ + A +
Sbjct: 1492 NTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQ 1542
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 151/361 (41%), Gaps = 39/361 (10%)
Query: 142 YMKILFLNDRVKE---ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YM+++ L +V++ A + M R + T+T+L+ V+AG EA+ F++M+
Sbjct: 1181 YMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRME 1240
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
+ G +PDK A +++I + + R A+ F ++L K E D
Sbjct: 1241 DYGCKPDKIAFSVVISS----------------LSKKRRAIEAQSFFDSL---KDRFEPD 1281
Query: 259 SLLWQ--VHPQFSPEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
+++ VH IS+ + V E I + ++ L + + + S
Sbjct: 1282 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFS 1341
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++D ++ + ++ V+ R + L + ++ + Y LI + +
Sbjct: 1342 EMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDD 1401
Query: 375 TFPKVAEIVEEMTKA----GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--- 427
+ +I+ + K S G I +LG A ++F+ + +D KC
Sbjct: 1402 NLEEAVKILNSVKKGCNLNASSFNPIFGC--ISKLGDVN---SAHRMFAKM-KDLKCRPN 1455
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
T TY L+ ++ S D LK+ K M I P+ T+ VL++ +G ++A + K
Sbjct: 1456 TVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFK 1515
Query: 488 E 488
E
Sbjct: 1516 E 1516
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ T+ T++D F + + + + K FE MQ +G+ + VTY S+++ LSN G +D A+ +W
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M P IV++ A + +KEA ++ ++ ++ L PN T+ +++ +A
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKA 391
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
G EE + + M + G+ P+ + N LI C+ R +L M+ L
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYEL 444
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 111/553 (20%), Positives = 217/553 (39%), Gaps = 60/553 (10%)
Query: 4 TISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+IS + ++L W +L + + ++Q+ E FF W + +
Sbjct: 19 SISTISELLSNQHW---SELKPHFRTTKPAIFLDQLFNAGVDSELVLRFFQWSQKEFRIS 75
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD------- 116
+ T +L + +K+ S ++ + K + + T +SV H L GD
Sbjct: 76 YGLETTGKVLHLLANSKKYSKVRSFLD----KLVKNEKHTVSSVFHSLLLGGDRPCANAL 131
Query: 117 --------------VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
+ A ++ ++ ++ S + L + E VYKEM
Sbjct: 132 ITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEM 191
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK---A 219
I+R + PN T+ + + L +AGK +A ++ ++ G P+ N LI+ CK A
Sbjct: 192 IKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSA 251
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN----DSLLWQVHPQ-FSPEFIS 274
G+ IL+ M N++ F + F DEN + ++ Q P ++
Sbjct: 252 GKMYRADAILKEMLANKICPNEITFNTLIDGF-CKDENVLAAKNAFEEMQRQGLKPNIVT 310
Query: 275 DNDAVEFVTTD--IEGPLSIDQGLVLILLKKKNLVAIDSLLSG----------------I 316
N + ++ + ++ +++ +V + L K N+V ++L++G I
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGL-KPNIVTFNALINGFCKKKMIKEARKLFDDI 369
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
++ + ++ +T+I+ C + + + + Y LI L +
Sbjct: 370 AEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNV 429
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKCT-ATYTAL 434
+++ EM V +LI P A K+ +L K TY L
Sbjct: 430 RAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTL 489
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSI 492
+ Y G+ ALK+ M ++G ++ T+NVL+ G K G++ DA E +K +
Sbjct: 490 MDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGL 549
Query: 493 QADALSKDAVPME 505
+ + D V +E
Sbjct: 550 NPNRTTYDVVRLE 562
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 58/121 (47%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY ++ + + S + + M G+ + VTY ++M G++ A+ +
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVR 506
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M+ + +V+Y +K ++++A + EM+++GL PN TY V+ ++
Sbjct: 507 TQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEK 566
Query: 185 G 185
G
Sbjct: 567 G 567
>gi|15228903|ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
gi|7670019|dbj|BAA94973.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332642359|gb|AEE75880.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Query: 32 DSYTVNQ----VLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYTTMLDIFGEAKRISSM 85
DS T N +LK H +E +F +VSR GFN Y ++ A+R S
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFN----GYLVLVQALLNAQRFSEG 409
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ M G+ +Y +V+ L A ++ A EM+ + P +V++ ++
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ VK+ V ++++ G P+ T+++++ L RA + ++A + F +M E G++P+
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
+ NILI CC G+T + + MKEN L+ + +Q+F
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 39 VLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
V K H +EK + GF D T++ +++ AK I F+ M E GI
Sbjct: 476 VKKVHGVLEKLLV--------HGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
+ +TY ++ + GD D +V ++ +MK P + +Y A ++ +VK+A ++
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
K M++ GL P+ +TY+ L++ L +G+ EA E+FS ++ G PD
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 180/449 (40%), Gaps = 36/449 (8%)
Query: 66 RFTYTTMLDIFGEAKRISSMKY---VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
R + M + G R+ KY VF + G+ Y +V+ L + +D A
Sbjct: 142 RISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYL 201
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+++M+ C P +Y + + V EA + K+M Q G PN +TYT+L++ +
Sbjct: 202 KFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFL 261
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KC---CKAGETRTIILILRYMKENR 236
AG+ +EAL+ M+ + P++A + +C CKA E +++ +M+++
Sbjct: 262 IAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFE-----VLVGFMEKDS 316
Query: 237 LALR--YPVFKEALQTFKVADENDSLLWQVHPQ-FSPE----------FISDNDAVE--- 280
R Y L +A E L ++ + + P+ + +D VE
Sbjct: 317 NLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCR 376
Query: 281 ----FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
FV+ ++ + LV LL + D L + + + +I+ C
Sbjct: 377 IFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC 436
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
RR + A + ++ + + KV ++E++ G V
Sbjct: 437 KARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVI 496
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTM 454
+L+I+ L A+ A F + E + TY LI S G D+++K++ M
Sbjct: 497 TFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM 556
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
G+ P L +N + K+ +V AE
Sbjct: 557 KENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 130/340 (38%), Gaps = 16/340 (4%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
EK N+ V Y +V++ LSN ++ + P ++ A M L +
Sbjct: 313 EKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLV 372
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
E ++ + RG+ P Y VL++ L+ A ++ E +M G+ + N +I
Sbjct: 373 ETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVI 432
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
+ CKA + L M++ ++ F L + V + + +VH
Sbjct: 433 DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD----VKKVH-------- 480
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVL-ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+E + P I L++ L + K + +++ I+ + + +I
Sbjct: 481 ---GVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C D ++ F + L+ + AY A I K+ K E+++ M + G
Sbjct: 538 RSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLK 597
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYT 432
+ + LI L + R A ++FS + +YT
Sbjct: 598 PDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 107/504 (21%), Positives = 186/504 (36%), Gaps = 105/504 (20%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A+L F + RS G DRFTY ++ + + + + M+++G + TYT
Sbjct: 196 LDLAYLKFQQM-RSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYT 254
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKE-----------------CYPTI------------ 136
++ AG VD A+ E M++++ C P
Sbjct: 255 ILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEK 314
Query: 137 ------VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
V Y A + L N KE +++ +RG P+ T+ M L++ E
Sbjct: 315 DSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVET 374
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
IF GV+P +L++ A R+ + +R + V
Sbjct: 375 CRIFDGFVSRGVKPGFNGYLVLVQALLNAQ---------RFSEGDRYLKQMGV------- 418
Query: 251 FKVADENDSLLWQVHPQFSPEFISD--------NDAVEFVTTDIEGPLSIDQGLVLILLK 302
D LL V +S + D +A F+T D+G+
Sbjct: 419 -------DGLLSSV---YSYNAVIDCLCKARRIENAAMFLTE------MQDRGI------ 456
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
NLV ++ LSG S++ D + ++E LL + K D+
Sbjct: 457 SPNLVTFNTFLSGY---SVRGDVKKVHGVLE----------KLLV--HGFKPDV----IT 497
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLP 422
+ +I L + + +EM + G +LI S + K+F+ +
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMK 557
Query: 423 EDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
E+ Y A I + KA ++ KTM R G+ P T++ L+ L + GR S
Sbjct: 558 ENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRES 617
Query: 481 DA-EIYRK-EKKSIQADALSKDAV 502
+A E++ E+ D+ +K V
Sbjct: 618 EAREMFSSIERHGCVPDSYTKRLV 641
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 174/419 (41%), Gaps = 47/419 (11%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+T M+ + + + + V M+++ + D VT+ ++ AGDV+ A+ + +
Sbjct: 160 YTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDS 219
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K P +V+Y + +K L N R +A +V++ M G+ P+ ++ +L+ RAG+
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGE 279
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
EEAL + +M+ V PD + + LI + GE LR M+E L ++
Sbjct: 280 LEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTM 339
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
+ F A L+ + + E ++ + VT + L+ L K++ L
Sbjct: 340 VIGGFCRA----GLMLEAL-RVRDEMVAFGCLPDVVTYNT---------LLNGLCKERRL 385
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+ LL+ + ++ + D +T+I C + AL F+ L + Y L
Sbjct: 386 SDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK 426
I + + K E+ ++M HS ++ +
Sbjct: 446 IDGMCRQGDLGKANELWDDM----HSREIFPNHV-------------------------- 475
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
TY+ LI + G D A M KGI P++ T+N ++ G + G VS + +
Sbjct: 476 ---TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
Query: 4 TISNVYK-ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTH---PPMEKAWLFFNWV 56
T ++V K +L+ WD A+++ + + + D + N ++ +E+A F+ +
Sbjct: 231 TYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEM 290
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
R R D +++ ++ +F + M+E G+ D V YT V+ AG
Sbjct: 291 -RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGL 349
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A+ + +EM C P +V+Y + L R+ +A ++ EM +RG+PP+ T+T
Sbjct: 350 MLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTT 409
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L+ R G E+AL+ F + + ++PD N LI+ C+ G+
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/439 (20%), Positives = 176/439 (40%), Gaps = 49/439 (11%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G TY ++L R + VF M G+ D ++ ++ AG+++
Sbjct: 222 SKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELE 281
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++EM+ + P +VS++ + + + A + +EM + GL P+ YT+++
Sbjct: 282 EALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
RAG EAL + +M G PD N L+ CK +L MKE +
Sbjct: 342 GGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVP 401
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
F + + D N Q S + + D V + T L+
Sbjct: 402 PDLCTFTTLIHGY-CRDGNIEKALQFFDTISDQRLRP-DIVTYNT------------LID 447
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ ++ +L + L + + I + S +I+ +C+ + D A + V
Sbjct: 448 GMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK---- 503
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
GI+ + T+ I++ ++G+ + ++ +P +
Sbjct: 504 ---------GIVPNIMTY---NSIIKGYCRSGN-------------VSKGQQFLPKMRHD 538
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
++P+ TY LI Y G +A + K M + + P T+N++++G G
Sbjct: 539 KVMPD----LITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGN 594
Query: 479 VSDAE-IYRK-EKKSIQAD 495
+ +A+ +Y+K + I+ D
Sbjct: 595 MQEADWVYKKMGARGIEPD 613
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG D T+TT++ + I F+ + ++ + D VTY +++ + GD+
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +W++M +E +P V+Y+ + +V A EM+ +G+ PN TY +
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ R+G + + KM+ V PD N LI K G+ +L+ M+ +
Sbjct: 516 IKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENV 575
Query: 238 ALRYPVFKEALQTFKVADENDSLLW 262
+ + F V W
Sbjct: 576 QPDAVTYNMIISGFSVHGNMQEADW 600
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 75/147 (51%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G + TY +++ + + +S + M+ + D +TY +++H G +
Sbjct: 502 NKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMH 561
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A N+ + M+ + P V+Y + ++ ++EA VYK+M RG+ P+ YTY ++
Sbjct: 562 EAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMI 621
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPD 205
V AG +++ ++ +M + G+ PD
Sbjct: 622 NGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SR + TY+ ++D E ++ + + M KGI + +TY S++ +G+V
Sbjct: 467 SREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVS 526
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+M+ + P +++Y + ++ EA ++ K M + P+ TY +++
Sbjct: 527 KGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMII 586
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G +EA ++ KM G++PD+ +I AG ++ + M + LA
Sbjct: 587 SGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLA 646
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYR 486
T+ ++ F AG + A+ + +M KGI P L T+N +L GL + GR A E++R
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFR 253
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 132/326 (40%), Gaps = 49/326 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++D F + + + + E M G D +TYT+V++ G +D AV +
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M C P VSYT +K L R +A ++ +MIQ+G PPN T+ L+ +L +
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G E+A+E+ +M G PD + + +I+ KAG+T
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT---------------------- 512
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+EAL+ V V+ SP I I + L ++
Sbjct: 513 EEALELLNV---------MVNKGISPNTI------------------IYSSIACALSREG 545
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + + I D +I+ D+ + + +I C D A+ F Y V + Y
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAG 390
LI L + E++ E+ G
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSRG 631
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 171/420 (40%), Gaps = 20/420 (4%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V E M KG +D V++ + G VD AV + ++ C IVSY A +K L
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ R + ++ EM++ PN T+ L+ YL R G +E E+ ++M E G PD
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+I+ CK G IL M L + L+ A+ W+ +
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER-----WKEAEE 342
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
E + ++ VT +I GLV +++ LL ++ D
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE---------LLEQMLSHGCMPDVIT 393
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T+I C D A++ + +Y ++ L + E++ +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSA 444
+ G LI+ L A ++ + + C+ +Y+ +I AG
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKAGKT 512
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK-KSIQADALSKDAV 502
++AL++ M KGI P+ ++ + L + GRV+ +++ K +I++DA+ +AV
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 6/221 (2%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T++ + V M E G D Y +++ + G ++ A I M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P +V Y +K L +R KEA ++ EM Q+ P + T+ +L+++ + G
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-----KENRLALRYP 242
+ +E+ +M G PD +I CK G +++L+ M K N ++
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI- 431
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
V K + D + + + P ++ N + F+
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/428 (19%), Positives = 164/428 (38%), Gaps = 22/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +Y +L AKR ++ + + M + VT+ +++ +L G +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M C P I Y + + ++ A ++ M GL PN Y +++
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L A +++EA E+ S+M + D NIL++ C+ G +I +L M L
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM------LS 384
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG--PLSIDQGLVL 298
+ + + V + F E + D + + G P ++ +VL
Sbjct: 385 HGCMPDVITYTTVIN-----------GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 299 I-LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L V + L+S ++ + + +T+I C + A+ + + +
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ +Y +I L K + E++ M G S + + + L R ++
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + + + Y A+I D+A+ + M G P+ T+ +L+ GL
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 476 LGRVSDAE 483
G +A+
Sbjct: 614 EGLAKEAQ 621
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/408 (18%), Positives = 151/408 (37%), Gaps = 60/408 (14%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P ++ ++ L R+ +A +V EM +G P Y V++E R+G + ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK----ENRLALRYPVFKEALQ 249
M G D CN+++ C+ G + +LR + E + V K
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFV---------------------TTDI-- 286
+ D + + V +P ++ N + ++ T DI
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 287 ----------EGPLSIDQGLVLILLK---KKNLVAIDSLLSGI----------------M 317
EG L + ++ + K N+V +++L G+
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
K LD + +++ C + D + E + + Y +I K
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTAL 434
+ +++ M+ G +++ L SA R V A ++ S + + Q C T+ L
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ-QGCPPNPVTFNTL 467
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I G ++A+++ K M G P L +++ ++ GL K G+ +A
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 136/341 (39%), Gaps = 44/341 (12%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+PPN YT+ ++ L G+ +ALE+ +M G P ++++E C++G R +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 227 LILRYMKENRLAL---RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+L M L + A+ DE LL ++ F + D V +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA-----FFGCEADIVSYN- 220
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA----VISTIIEVNCDHR 339
++ +GL + K ++ L MD+ +++D A +T+I C +
Sbjct: 221 -------AVLKGLCM----AKRWGDVEEL----MDEMVRVDCAPNIVTFNTLIGYLCRNG 265
Query: 340 --RRDGALLA--FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R +LA E+ D+ + Y +I + K EI+ M G V
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRM----YATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTALIGVYFSAGSADKALKI 450
++ L SA R A ++ S + P D T+ L+ + G D+ +++
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD---VTFNILVDFFCQNGLVDRVIEL 378
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ M G P + T+ ++ G K G + +A + K S
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 132/326 (40%), Gaps = 49/326 (15%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++D F + + + + E M G D +TYT+V++ G +D AV +
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M C P VSYT +K L R +A ++ +MIQ+G PPN T+ L+ +L +
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G E+A+E+ +M G PD + + +I+ KAG+T
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT---------------------- 512
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+EAL+ V V+ SP I I + L ++
Sbjct: 513 EEALELLNV---------MVNKGISPNTI------------------IYSSIACALSREG 545
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ + + I D +I+ D+ + + +I C D A+ F Y V + Y
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAG 390
LI L + E++ E+ G
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSRG 631
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 171/420 (40%), Gaps = 20/420 (4%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V E M KG +D V++ + G VD AV + ++ C IVSY A +K L
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ R + ++ EM++ PN T+ L+ YL R G +E E+ ++M E G PD
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+I+ CK G IL M L + L+ A+ W+ +
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER-----WKEAEE 342
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
E + ++ VT +I GLV +++ LL ++ D
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE---------LLEQMLSHGCMPDVIT 393
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T+I C D A++ + +Y ++ L + E++ +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSA 444
+ G LI+ L A ++ + + C+ +Y+ +I AG
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKAGKT 512
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK-KSIQADALSKDAV 502
++AL++ M KGI P+ ++ + L + GRV+ +++ K +I++DA+ +AV
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 6/221 (2%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T++ + V M E G D Y +++ + G ++ A I M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P +V Y +K L +R KEA ++ EM Q+ P + T+ +L+++ + G
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-----KENRLALRYP 242
+ +E+ +M G PD +I CK G +++L+ M K N ++
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI- 431
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
V K + D + + + P ++ N + F+
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/428 (19%), Positives = 164/428 (38%), Gaps = 22/428 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +Y +L AKR ++ + + M + VT+ +++ +L G +
Sbjct: 211 GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERV 270
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +M C P I Y + + ++ A ++ M GL PN Y +++
Sbjct: 271 HEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKG 330
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L A +++EA E+ S+M + D NIL++ C+ G +I +L M L
Sbjct: 331 LCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM------LS 384
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG--PLSIDQGLVL 298
+ + + V + F E + D + + G P ++ +VL
Sbjct: 385 HGCMPDVITYTTVIN-----------GFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 299 I-LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L V + L+S ++ + + +T+I C + A+ + + +
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 493
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ +Y +I L K + E++ M G S + + + L R ++
Sbjct: 494 PDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQM 553
Query: 418 FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
F + + + Y A+I D+A+ + M G P+ T+ +L+ GL
Sbjct: 554 FDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Query: 476 LGRVSDAE 483
G +A+
Sbjct: 614 EGLAKEAQ 621
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/408 (18%), Positives = 151/408 (37%), Gaps = 60/408 (14%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P ++ ++ L R+ +A +V EM +G P Y V++E R+G + ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK----ENRLALRYPVFKEALQ 249
M G D CN+++ C+ G + +LR + E + V K
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFV---------------------TTDI-- 286
+ D + + V +P ++ N + ++ T DI
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 287 ----------EGPLSIDQGLVLILLK---KKNLVAIDSLLSGI----------------M 317
EG L + ++ + K N+V +++L G+
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
K LD + +++ C + D + E + + Y +I K
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTAL 434
+ +++ M+ G +++ L SA R V A ++ S + + Q C T+ L
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ-QGCPPNPVTFNTL 467
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I G ++A+++ K M G P L +++ ++ GL K G+ +A
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 515
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 136/341 (39%), Gaps = 44/341 (12%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+PPN YT+ ++ L G+ +ALE+ +M G P ++++E C++G R +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 227 LILRYMKENRLAL---RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+L M L + A+ DE LL ++ F + D V +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA-----FFGCEADIVSYN- 220
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA----VISTIIEVNCDHR 339
++ +GL + K ++ L MD+ +++D A +T+I C +
Sbjct: 221 -------AVLKGLCM----AKRWGDVEEL----MDEMVRVDCAPNIVTFNTLIGYLCRNG 265
Query: 340 --RRDGALLA--FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R +LA E+ D+ + Y +I + K EI+ M G V
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRM----YATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTALIGVYFSAGSADKALKI 450
++ L SA R A ++ S + P D T+ L+ + G D+ +++
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD---VTFNILVDFFCQNGLVDRVIEL 378
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ M G P + T+ ++ G K G + +A + K S
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D +T N ++ H ++KA F +SR RG TYT ++ + ++ +
Sbjct: 286 DVFTYNILINGHCKEGNVKKALEIFENMSR-RGVRATVVTYTALIYALSKKGQVQETDKL 344
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ +GI D V Y ++++ S +G++D A I EM+ K P V+Y M+ L L
Sbjct: 345 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 404
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
RV EA + EM +RG+ P+ TY L+ G ++AL I ++M G P
Sbjct: 405 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 464
Query: 209 CNILIEKCCKAGETRTIILILRYMKEN 235
N LI+ CK G+ +++ M EN
Sbjct: 465 YNALIQGLCKNGQGDDAENMVKEMVEN 491
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G D FTY +++ + + +FE M +G+ VTYT++++ LS G V
Sbjct: 280 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 339
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++E + P +V Y A + + + A ++ EM ++ + P+ TY LM
Sbjct: 340 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 399
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE---N 235
L G+ +EA ++ +M E G+QPD N LI G+ + + I M N
Sbjct: 400 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 459
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIE 287
L Y + L D+ ++++ + V +P+ + +E +TT+ E
Sbjct: 460 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 160/410 (39%), Gaps = 60/410 (14%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
T+ ++ L +AG A+ + +M P V+Y + RV+ A D+ +E
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 170
Query: 162 MIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKA 219
M +RG + PN YTY ++ + G+ +EA+++F +M G V+P+ N LI C
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230
Query: 220 GETRTIILILRYMKENRLALR---YPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISD 275
G+ T +L M E +A+ Y + AL E L+ ++ + +P+ +
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290
Query: 276 N-------------DAVEFVTT----DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
N A+E + + L+ L KK + D L +
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ I+ D + + +I + D A K + + Y L+ L L +
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVY 438
++++EMT+ G Q TY LI Y
Sbjct: 411 ARKLIDEMTERGI---------------------------------QPDLVTYNTLISGY 437
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G AL+I M KG +P+L T+N L+ GL K G+ DAE KE
Sbjct: 438 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 487
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF 76
A +LL+ +P + ++ T N V+ + ++ A + G +++TY T++ +
Sbjct: 133 ALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 191
Query: 77 GEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ R+ VF+ M KG + +AV Y +++ + G +D A+ + M + T
Sbjct: 192 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 251
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ +Y + LF++ R EA ++ +EM +GL P+ +TY +L+ + G ++ALEIF
Sbjct: 252 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 311
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETR 223
M GV+ LI K G+ +
Sbjct: 312 NMSRRGVRATVVTYTALIYALSKKGQVQ 339
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TY ++ R + + E M KG+ D TY +++ G+V
Sbjct: 246 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 305
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+E M + T+V+YTA + L +V+E ++ E ++RG+ P+ Y L+
Sbjct: 306 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 365
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII 226
+G + A EI +M++ + PD N L+ C G E R +I
Sbjct: 366 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 415
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 4/212 (1%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ + + ++ + + M E+G+ + TY ++H L G A + EEM
Sbjct: 220 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 279
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K P + +Y + VK+A ++++ M +RG+ TYT L+ L + G+ +
Sbjct: 280 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 339
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFK 245
E ++F + G++PD N LI +G I+ M++ R+A + Y
Sbjct: 340 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 399
Query: 246 EALQTFKVADENDSLLWQVHPQ-FSPEFISDN 276
L DE L+ ++ + P+ ++ N
Sbjct: 400 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYN 431
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
++ ++ + + +I CD + D ALL + V+ + + Y L+ L +
Sbjct: 213 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 272
Query: 381 EIVEEMTKAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
E+VEEM G + V+ +LI+ + G+ ++ A +IF + + TYTALI
Sbjct: 273 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK---ALEIFENMSRRGVRATVVTYTALI 329
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQ 493
G + K++ R+GI P L +N L+ G + A EI + EKK I
Sbjct: 330 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 389
Query: 494 AD 495
D
Sbjct: 390 PD 391
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/455 (18%), Positives = 187/455 (41%), Gaps = 25/455 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D FTYTT+L F +A +F M+ G + T+ +++ N G
Sbjct: 387 KGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAE 446
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++EE+++ C P IV++ + + N E + V+KEM + G P T+ L+
Sbjct: 447 MMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 506
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
R G +++A+ ++ +M EAGV PD ++ N ++ + G + MK+ R
Sbjct: 507 AYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKP 566
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ L + + E + + + E + + + P+ + +++
Sbjct: 567 NELTYCSLLHAYANSKEIERM---------------HTLAEEIYSGLTEPVPVLLKTLVL 611
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ K +L+ + K D + ++ +I + + A + + +
Sbjct: 612 VNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPS 671
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG--HSLGVYLGALLIH----RLGSARRPVP 413
Y +L+ + + F + E+++E+ G L Y + + R+ A R
Sbjct: 672 LATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFS 731
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
K + L+P+ TY + Y + + A+ + + M + G + T+N ++ G
Sbjct: 732 YMKTYGLVPD----VITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGY 787
Query: 474 EKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
K R +DA ++ + ++ + + E+I
Sbjct: 788 CKHSRRADAIMFVSSLNQLDPHVTKEEELRLSERI 822
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 106/512 (20%), Positives = 200/512 (39%), Gaps = 78/512 (15%)
Query: 12 LKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH--DRFTY 69
L TW+S + D + + L + + A F+WV F +
Sbjct: 135 LSSGTWNS---------LSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVV 185
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
++ + G+ ++S+ + +++ G ++D YTS++ ++ G AV ++++M+
Sbjct: 186 AVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEE 245
Query: 130 KECYPTIVSYTAYMKILF-LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ C PT+++Y + + + + + + M G+ P+ YTY L+ R YE
Sbjct: 246 EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYE 305
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA ++F +M+ +G PDK N L++ K+ R P KEA+
Sbjct: 306 EAAQVFEEMKLSGFSPDKVTFNTLLDVYGKS--------------------RRP--KEAM 343
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+ K + FSP ++ N + D GL+ ++ K+
Sbjct: 344 EVLKEME---------FSGFSPSIVTYNSLISAYARD---------GLLREAMELKD--- 382
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+++K I+ D +T++ + A+ F + ALI
Sbjct: 383 ------QMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIK 436
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLP 422
+ F ++ ++ EE+ + + L+ G + +F +P
Sbjct: 437 MHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 496
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
E T+ LI Y GS +A+ +YK M G+ P L ++N +LA L + G +
Sbjct: 497 ERD----TFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQS 552
Query: 483 EIYRKEKKSIQADALSKDAVPMEEKICDLLYG 514
E E K D K P E C LL+
Sbjct: 553 EKVFAEMK----DGRCK---PNELTYCSLLHA 577
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
KA N+++ S GF+ TY +++ + ++ + V + + KG+ D ++Y +V
Sbjct: 655 KANEILNFMNES-GFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTV 713
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ G + A I+ MK P +++Y ++ + ++A V + MI+ G
Sbjct: 714 IFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGC 773
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
N TY +++ + + +A+ S + +
Sbjct: 774 KRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQ 805
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 12/142 (8%)
Query: 348 FEYSVKMDLNLERTAYLAL----IGILIKLNTFPK------VAEIVEEMTKAGHSLGVYL 397
FEY K +L+L + +L +GI+ L + K V V E L +
Sbjct: 125 FEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSV 184
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMC 455
A++I LG + A+ I + L +D YT+LI Y S G A+ ++K M
Sbjct: 185 VAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKME 244
Query: 456 RKGIHPSLGTFNVLLAGLEKLG 477
+G P+L T+NV+L K+G
Sbjct: 245 EEGCKPTLITYNVILNVYGKMG 266
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 190/478 (39%), Gaps = 80/478 (16%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + TY +L + ++ + + + M+E+ I +DAV Y+ ++ L G +D A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 121 VNIWEEMKLKE---------------CY--------------------PTIVSYTAYMKI 145
N++ EM++K CY P +V+++A +
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+++EA +++KEMIQRG+ P+ TYT L++ + + ++A + M G P+
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF------KVADENDS 259
NILI CKA + + R M + + +Q F +VA E
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE--- 443
Query: 260 LLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
L+Q V + P+ +S ++ + + E +++ + I
Sbjct: 444 -LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE------------------IFEKIE 484
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
++LD + + II C+ + D A F + + Y +IG L K +
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 378 KVAEIVEEMTKAGHSL-GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIG 436
+ + +M + GHS G L+ LG A K L+ E ++C G
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEG----DATKSAKLIEEIKRC--------G 592
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA--GLEKLGRVSDAEIYRKEKKSI 492
A + AL M + G P + TF LL LE+ V DA K K++
Sbjct: 593 FSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAM 650
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 200/456 (43%), Gaps = 32/456 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G H+ +T + M++ +++S + + G D VT++++++ L G V
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + + M PT+++ A + L LN +V +A + M++ G PN TY +++
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ ++G+ A+E+ KM+E ++ D +I+I+ CK G + M+
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 240 RYPVFKEALQTFKVA---DENDSLLWQ-VHPQFSPEFISDNDAVE-FVTTDIEGPLSIDQ 294
++ ++ F A D+ LL + + +P+ ++ + ++ FV EG L +
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK---EGKLREAE 337
Query: 295 GLVLILLKK---KNLVAIDSLLSGIMDKSIQLDSA--VISTIIEVNCDHRRRDGALL--- 346
L ++++ + V SL+ G K QLD A ++ ++ C R +L
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFC-KENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 347 ---------AFEYSVKMDLN---LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
E KM L + Y LI +L E+ +EM
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAGSADKALKIYK 452
+ +L+ L P A +IF + + + Y +I +A D A ++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE-IYRK 487
++ KG+ P + T+N+++ GL K G +S+A+ ++RK
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + D TYT+++D F + ++ ++ +LM KG + T+ +++ A +D
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ ++ +M L+ V+Y ++ +++ A ++++EM+ R + P+ +Y +L++
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 180 YLVRAGKYEEALEIFSKMQEA-----------------------------------GVQP 204
L G+ E+ALEIF K++++ GV+P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKEN 235
D NI+I CK G L+ R M+E+
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY T++ F E ++ K +F+ M + + D V+Y ++ L + G+ +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+E+++ + I Y + + +V +A D++ + +G+ P+ TY +++
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L + G EA +F KM+E G P+ NILI G+ ++ +K ++
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Query: 240 RYPVFKEALQTF 251
+ AL T
Sbjct: 596 DASTLRFALSTL 607
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 156/393 (39%), Gaps = 34/393 (8%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D AV++++EM P ++ ++ ++ + D+ K+M +G+ N YT +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ R K A K+ + G +PD + LI C G + ++ M E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG- 172
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG---PLSIDQ 294
K L T L +V +DAV + +E P +
Sbjct: 173 ------HKPTLITLNALVNGLCLNGKV-----------SDAVLLIDRMVETGFQPNEVTY 215
Query: 295 GLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
G VL ++ K A+ LL + ++ I+LD+ S II+ C D A F
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RLGSARR 410
+ Y LI + A+++ +M K + V + LI + G R
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 411 PVPAAKIF---SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
K + P+ T TYT+LI + DKA + M KG P++ TFN
Sbjct: 336 AEELHKEMIQRGISPD----TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 468 VLLAGLEKLGRVSDA-EIYRKEK-KSIQADALS 498
+L+ G K + D E++RK + + AD ++
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 25/214 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ AW F + +G D TY M+ + +S +F M+E G + + TY
Sbjct: 508 VDDAWDLFCSLPL-KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 106 SVMHWLSNAGDVDGAVNIWEEMK---------------------LKECY-PTIVSYTAYM 143
++ GD + + EE+K LK + P + ++T +
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLL 626
Query: 144 KILFL--NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ L N V +A ++K M G PN TY +++ L+ + + +M E G
Sbjct: 627 RPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERG 686
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
QP+ + I CK + IL+LR M+ +
Sbjct: 687 CQPNAVTKSTFISGLCKQDLHGSAILLLRKMEND 720
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 166/410 (40%), Gaps = 57/410 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ + + + + VF M+ G+ AV Y + ++ L G+ D A I++ M
Sbjct: 192 TYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRM 251
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K C PT +YT + + + A ++ EM+ PN TYT L+ R G
Sbjct: 252 KKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLC 311
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVF 244
E+A E+F +MQEAG++PD A N L+E +AG I ++++M Y +
Sbjct: 312 EKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIL 371
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+A D+ +++ D V T + L+ K
Sbjct: 372 VDAYGKAGFQDDAEAVF------------KDMKRVGITPT-----MKSHMVLLSAYSKMG 414
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
++ + +L+ + ++LD+ V++++ L
Sbjct: 415 SVNKCEEILNQMCKSGLKLDTYVLNSM--------------------------------L 442
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
L G L + +V ++E K + + +LI+R G A +F LLP
Sbjct: 443 NLYGRLGQFGKMEEVLRVME---KGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSK 499
Query: 425 --QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ T+T+ IG Y K L+I++ M G +P GT VLLA
Sbjct: 500 GLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAA 549
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA F + R+ G Y ++ + + +F+ M++ TYT
Sbjct: 206 LEKAEAVFAEM-RNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYT 264
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ AG A+ ++ EM +C P I +YTA + ++A +V+++M +
Sbjct: 265 MLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA 324
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
GL P+ Y Y LME RAG A EIFS MQ G +PD+A+ NIL++ KAG
Sbjct: 325 GLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAG 379
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
AL F + D Y AL+ + K E+ E+M +AG VY L+
Sbjct: 279 ALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALME 338
Query: 404 RLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIH 460
A P AA+IFSL+ + C A+Y L+ Y AG D A ++K M R GI
Sbjct: 339 AYSRAGYPYGAAEIFSLM-QHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGIT 397
Query: 461 PSLGTFNVLLAGLEKLGRVSDAE 483
P++ + VLL+ K+G V+ E
Sbjct: 398 PTMKSHMVLLSAYSKMGSVNKCE 420
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/477 (17%), Positives = 179/477 (37%), Gaps = 61/477 (12%)
Query: 15 STWDSAQDLLKNLPIKWDS-YTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
S W S D+L WD +TV L+ + W+ F D Y ++
Sbjct: 104 SIWGSL-DMLPPTLDAWDDIFTVAVQLRMRKQWDSIISICRWILLRSSFKPDVICYNLLI 162
Query: 74 DIFGEAKRISSMKYVF-ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
+ FG+ + + +L++ + I + TY ++ +G ++ A ++ EM+
Sbjct: 163 EAFGQKLLYKEAESTYLQLLEARCIPTED-TYALLIKAYCISGLLEKAEAVFAEMRNYGL 221
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
+ V Y AY+ L +A +++K M + P TYT+L+ +AGK AL+
Sbjct: 222 PSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALK 281
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+F +M +P+ L+ + G + M+E L + ++ +
Sbjct: 282 LFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYS 341
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
A +P + E +
Sbjct: 342 RAG---------YPYGAAE----------------------------------------I 352
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
S + + D A + +++ +D A F+ ++ + +++ L+ K
Sbjct: 353 FSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSK 412
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--AT 430
+ + K EI+ +M K+G L Y+ +++ G + ++ ++ + +T
Sbjct: 413 MGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADIST 472
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
Y LI Y AG ++ +++ + KG+ P + T+ ++G S ++Y K
Sbjct: 473 YNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWT------SRIGAYSKKKLYLK 523
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 70/175 (40%), Gaps = 35/175 (20%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D + +ML+++G + M+ V +M++ D TY +++ AG +
Sbjct: 430 GLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFI--- 486
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
E M+ D+++ + +GL P+ T+T +
Sbjct: 487 ----ERME----------------------------DLFQLLPSKGLKPDVVTWTSRIGA 514
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ Y + LEIF +M + G PD +L+ C +T + ++R M ++
Sbjct: 515 YSKKKLYLKCLEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKD 569
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 184/430 (42%), Gaps = 33/430 (7%)
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYT 140
I+S + VF+ M + G+++D T+ +++ G ++ A+ + E M + P V+Y
Sbjct: 185 IASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYN 244
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+K + R+ + D+ +M + GL PN TY L+ + G +EA +I M++
Sbjct: 245 TILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE----------ALQT 250
+ PD NILI C AG R + ++ MK +L + +L+
Sbjct: 305 NILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 251 FKVAD--ENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSID---------QGLVL 298
K+ + END + QV S +++ + E VT ++ + + L+
Sbjct: 365 KKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIK 424
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
LK +L ++ + K I++++ ++TI++ C R+ D A + + K +
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIV 484
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ Y LI + K E+ +EM + + V LI L + A + F
Sbjct: 485 DEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKF 544
Query: 419 ------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
LLP+D T+ ++I Y G +KA + Y + P T N+LL G
Sbjct: 545 DELAESGLLPDD----CTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 473 LEKLGRVSDA 482
L K G A
Sbjct: 601 LCKEGMTEKA 610
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 83/163 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + T T+LD + +++ + + ++G +D VTY +++ V+
Sbjct: 445 KGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEK 504
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +W+EMK + PT+ ++ + + L + + + A + + E+ + GL P+ T+ ++
Sbjct: 505 AFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIIL 564
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+ G+ E+A E +++ + +PD CNIL+ CK G T
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 179/434 (41%), Gaps = 28/434 (6%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF---ELMQEKGINIDAVTYTSVMHWLSNA 114
+ G +R TY + ++G K + S+K F ELM++ I D TY +++ + NA
Sbjct: 267 KRNGLVPNRVTYNNL--VYGYCK-LGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNA 323
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G + + + + MK + P +V+Y + F EA + ++M G+ PN T+
Sbjct: 324 GSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTH 383
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ +++L + K EE ++ E G PD + LI+ K G+ + ++R M
Sbjct: 384 NISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 234 ENRLALRYPVFK---EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+ + + +AL + DE +LL H + +I D V + T
Sbjct: 444 QKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKR---GYIVDE--VTYGT------- 491
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
L++ +++ + + + I +++I C H + + A+ F+
Sbjct: 492 -----LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+ L + + ++I K K E E K Y +L++ L
Sbjct: 547 LAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 411 PVPAAKIF-SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
A F +L+ E + T TY +I + +A + M K + P T+N +
Sbjct: 607 TEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSI 666
Query: 470 LAGLEKLGRVSDAE 483
+ L + G++S+A+
Sbjct: 667 ITSLMEDGKLSEAD 680
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 95/254 (37%), Gaps = 57/254 (22%)
Query: 56 VSRSRGFNHDRFTYTTMLD------------------------------------IFGEA 79
V +S D TY T++D + E
Sbjct: 335 VMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEE 394
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
KR + V EL++ G + D VTY +++ GD+ GA+ + EM K ++
Sbjct: 395 KREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+ L +V EA ++ +RG + TY L+ R K E+A E++ +M+
Sbjct: 455 NTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKR 514
Query: 200 AGVQPDKAACNILIEKCCKAGETRTII--------------------LILRYMKENRLAL 239
+ P N LI C G+T + +IL Y KE R+
Sbjct: 515 IKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEK 574
Query: 240 RYPVFKEALQ-TFK 252
+ + E+++ +FK
Sbjct: 575 AFEFYNESIKHSFK 588
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 14 YSTWDSAQDLLKNLPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
+ WD +K + I T N + L H E A F+ ++ S G D T+
Sbjct: 506 FEMWDE----MKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAES-GLLPDDCTFN 560
Query: 71 TMLDIFGEAKRISSMKYVFELMQEK---GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+++ + + R+ FE E D T +++ L G + A+N + +
Sbjct: 561 SIILGYCKEGRVEK---AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ E V+Y + + ++KEA D+ EM ++ L P+ +TY ++ L+ GK
Sbjct: 618 -ITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKL 676
Query: 188 EEALEIFSK 196
EA E+ K
Sbjct: 677 SEADELLKK 685
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 174/431 (40%), Gaps = 82/431 (19%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F + G++ + T+TT++ +I + + G +D V Y +++H L
Sbjct: 114 FQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLC 173
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
G+ A+++ + P +V Y+ + + + V +A D+Y EM+ +G+ PN
Sbjct: 174 KVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 233
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY+ L+ G+ ++A+++F+KM ++PD NIL++ CK G+ M
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK----------M 283
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
KE + VF ++ + + ++ S+
Sbjct: 284 KEGK-----TVFAMMMK------------------------------QGIKPNVVTYCSL 308
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
G L+ K + S+L + + + D + +I+ C ++ D A+ F+
Sbjct: 309 MDGYCLV----KEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMH 364
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ + Y +LI L KL ++V+EM H GV
Sbjct: 365 HKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM----HDRGV----------------- 403
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
P D TY++++ DKA+ + + +GI P++ T+ +L+ G
Sbjct: 404 ---------PPD---IITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 451
Query: 473 LEKLGRVSDAE 483
L K GR+ DA
Sbjct: 452 LCKGGRLEDAH 462
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
+ RG N D +Y ++D F + K++ +F+ M K I D VTY S++ L
Sbjct: 326 YTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKL 385
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G + A+ + +EM + P I++Y++ + L N +V +A + ++ +G+ PN YTY
Sbjct: 386 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTY 445
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
T+L++ L + G+ E+A IF + G ++I C G + +L MK+
Sbjct: 446 TILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKD 505
Query: 235 NRLALRYPVFKEALQTFKVADEND 258
N ++ +++ DEND
Sbjct: 506 NSCIPDAVTYEIIIRSLFDKDEND 529
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + +TYT ++D + R+ +FE + KG NI TYT ++H N G
Sbjct: 434 KDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLF 493
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
D A+ + +MK C P V+Y ++ LF D +A + +EMI RGL
Sbjct: 494 DEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL-REMITRGL 542
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 177/430 (41%), Gaps = 46/430 (10%)
Query: 80 KRISSMKYV----FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP- 134
K+ S +++ F + I+ + Y+S+ N DV A +++ + + P
Sbjct: 16 KKFHSFQFLKNTHFNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPP 75
Query: 135 ---------TIVSYTAYMKILFLNDRVK-EATDVYKEMIQR-----GLPPNCYTYTVLME 179
++V Y +L L+ +++ E + Q G PN T+T L++
Sbjct: 76 AIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIK 135
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
L G+ +AL + G Q D+ LI CK GETR + +LR + N +
Sbjct: 136 GLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQP 195
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
++ + D++ + + ++ + + IS N V + I G ++ Q
Sbjct: 196 NVVMYSTIIDGM-CKDKHVNDAFDLYSEMVSKGISPN--VVTYSALISGFFTVGQ----- 247
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC-DHRRRDGALLAFEYSVKMDLNL 358
LK AID L + ++ ++I+ D + +++ C D + ++G + F +K +
Sbjct: 248 -LKD----AID-LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTV-FAMMMKQGIKP 300
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y +L+ + K I+ M++ G + + +LI ++ A +F
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 360
Query: 419 ------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++P+ TY +LI G ALK+ M +G+ P + T++ +L
Sbjct: 361 KEMHHKHIIPD----VVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDA 416
Query: 473 LEKLGRVSDA 482
L K +V A
Sbjct: 417 LCKNHQVDKA 426
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/372 (18%), Positives = 144/372 (38%), Gaps = 37/372 (9%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+ Y++ N+ V +A ++ ++++ P + ++ LV++ Y L +
Sbjct: 40 NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
+M+ G+ P ++ + ++L +P TF
Sbjct: 100 QQMEFEGINP----------------------VLFHFQHPHQLMGYHP----NTITFTTL 133
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
+ L Q+H DN D G ++ GL + + A+D LL
Sbjct: 134 IKGLCLKGQIHQAL---LFHDNVVAMGFQLDQVGYGTLIHGLCKV---GETRAALD-LLR 186
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
+ +Q + + STII+ C + + A + V ++ Y ALI +
Sbjct: 187 RVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVG 246
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYT 432
++ +M VY +L+ + +F+++ + + TY
Sbjct: 247 QLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC 306
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KK 490
+L+ Y +KA I TM ++G++P + ++N+L+ G K+ +V +A KE K
Sbjct: 307 SLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 366
Query: 491 SIQADALSKDAV 502
I D ++ +++
Sbjct: 367 HIIPDVVTYNSL 378
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 9/193 (4%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
++ +T+I+ C + ALL + V M L++ Y LI L K+ +++
Sbjct: 126 NTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLL 185
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSA 441
+ V + + +I + + A ++S + TY+ALI +F+
Sbjct: 186 RRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTV 245
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDA 501
G A+ ++ M + I P + TFN+L+ G K G++ KE K++ A + +
Sbjct: 246 GQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM-------KEGKTVFAMMMKQGI 298
Query: 502 VPMEEKICDLLYG 514
P C L+ G
Sbjct: 299 KPNVVTYCSLMDG 311
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 89/165 (53%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V G D FTY ++D + K K VF +M + G+ D +Y+ ++ LS
Sbjct: 284 VMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMK 343
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+D A++++E M+ + P +V+Y++ + L + R+ A EM RG PPN TYT
Sbjct: 344 MLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYT 403
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L++ L ++ + ++A+ + K+++ G+Q + NIL++ CK G
Sbjct: 404 SLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDG 448
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 169/413 (40%), Gaps = 36/413 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D TYTT++ ++ + + +GI +D V+Y ++++ L G A
Sbjct: 114 GYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPA 173
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + +++ + C P +V Y + L + V++A D+Y EM ++ + PN TYT L+
Sbjct: 174 LRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYG 233
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI-ILILRYMKE----- 234
G+ ++A + ++M V P+ N L++ CK G+ R L+ MKE
Sbjct: 234 FCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPD 293
Query: 235 ----NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
N L Y + KEA + V + + Q VT D+
Sbjct: 294 VFTYNALMDGYFLVKEAGKAKNV--------FNIMAQMG------------VTCDVHSYS 333
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+ GL K K L L G+ ++++ D S++I+ C R + AL +
Sbjct: 334 VMISGLS----KMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDE 389
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
Y +LI L K + K +++++ G +Y +L+ L R
Sbjct: 390 MHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGR 449
Query: 411 PVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
A K+F L+ TY+ +I D+AL + M KG P
Sbjct: 450 LTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVP 502
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 177/400 (44%), Gaps = 18/400 (4%)
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY-PTIVSYTAYMKI 145
++F+ M+ GI + +T +++ + ++ A +++ ++ LK Y P I++YT ++
Sbjct: 70 HLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKI-LKLGYQPDIITYTTLIRG 128
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L LN +VKE+ + + ++ +G+ + +Y L+ L + G+ AL + K++ +PD
Sbjct: 129 LCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPD 188
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
N +I+ CK R + M E R+ + + F + + D ++
Sbjct: 189 VVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLN 248
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
E V ++ + LV L K+ + SL++ +M + + D
Sbjct: 249 --------------EMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDV 294
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ +++ + A F +M + + +Y +I L K+ + ++ E
Sbjct: 295 FTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEG 354
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAGS 443
M V + LI L + R A K + + + TYT+LI +
Sbjct: 355 MRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQ 414
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
DKA+ + K + +GI ++ T+N+L+ GL K GR++DA+
Sbjct: 415 VDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQ 454
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 95/198 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +Y+ M+ + K + +FE M+ + + D V Y+S++ L +G ++ A
Sbjct: 324 GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSA 383
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +EM + P +++YT+ + L + +V +A + K++ +G+ N YTY +L++
Sbjct: 384 LKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDG 443
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L + G+ +A ++F + G D +I+I CK + +L M++
Sbjct: 444 LCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPD 503
Query: 241 YPVFKEALQTFKVADEND 258
++ + F D ND
Sbjct: 504 AIAYETIINAFFEKDMND 521
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + +TY ++D + R++ + VF+ + KG N+D VTY+ +++ L
Sbjct: 426 KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLF 485
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
D A+ + +M+ K C P ++Y + F D +A + +EMI
Sbjct: 486 DEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 34/356 (9%)
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
++S+T + + LND A D + M++ PP + ++ LV+ Y + +F
Sbjct: 18 LLSHTHFHSLPNLND----AIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQ 73
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
+M+ G+Q + NILI C + + + + L L Y + + T+
Sbjct: 74 RMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKI----LKLGY---QPDIITYTTLI 126
Query: 256 ENDSLLWQVHP--QFSPEFISDNDAVEFVT--TDIEGPLSIDQ-GLVLILLKKKNLVAID 310
L QV F +S ++ V+ T I G I Q G L LL+K
Sbjct: 127 RGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRK------- 179
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNC-DHRRRDGALLAFE-YSVKMDLNLERTAYLALIG 368
I + + D + +TII+ C D RD L E + ++ N+ Y +LI
Sbjct: 180 -----IEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNV--VTYTSLIY 232
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC- 427
+ K ++ EM + V L+ L + A + +++ ++
Sbjct: 233 GFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGP 292
Query: 428 -TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY AL+ YF A KA ++ M + G+ + +++V+++GL K+ + +A
Sbjct: 293 DVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEA 348
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 69/157 (43%), Gaps = 35/157 (22%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RG + TYT+++D ++ ++ + + ++++GI + TY + V
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNIL---------V 441
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
DG L + R+ +A V+++++ +G + TY+++
Sbjct: 442 DG--------------------------LCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIM 475
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ L + ++EAL + SKM++ G PD A +I
Sbjct: 476 INGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIIN 512
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 189/473 (39%), Gaps = 30/473 (6%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
++NL +D V VL E A FF WV RS F H+R T+ +++I G A +++
Sbjct: 3 IRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 63 HARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALF 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+ +
Sbjct: 123 KVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREIS 182
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD N +I C+ + MK + + ++ + D+ D L
Sbjct: 183 PDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRL 242
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ- 322
V + I N A+ + T L+ L + + S+L ++DK I
Sbjct: 243 VE-EMKGYGIKPN-AITYST------------LLPGLCNAEKMSEARSILKEMVDKYIAP 288
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D+++ +I +C D A + +++ + E Y LI K + + ++
Sbjct: 289 TDNSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKL 348
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPV------------PAAKIFSLLPEDQKCTAT 430
++++ + + +H SA P+ A + L+ +
Sbjct: 349 LDKLIEKD---IIVRPQSTLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPTA 405
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 406 LNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPADAK 458
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D +TY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK K PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK G +L+ M
Sbjct: 263 PGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ + A + D + + + I + + P+
Sbjct: 318 -IRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPSAYNPI- 375
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
V L ++L+ +M +Q D ++T+I + D A +
Sbjct: 376 -----VEYLCNNGQTSKAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K + ++ M + H
Sbjct: 430 LRRKVDSEKSAYDSLVQSYLKKSEPADAKAALDSMIENDH 469
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + L+I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 7/217 (3%)
Query: 21 QDLLKNLPIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
+++++N + D T N + L H + A +F + +GF+ D+ Y+ ++D F
Sbjct: 361 ENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLRE-AEEKGFHIDKVGYSAVVDSFC 419
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ K I K + M KG N D VTYT+++ G +D A + ++M C P V
Sbjct: 420 KNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTV 479
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+YT + L N + EA ++ + PN TY+ +M L R GK EA ++ +M
Sbjct: 480 TYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREM 539
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
E G P+ N+LI+ C+ + ++ +Y++E
Sbjct: 540 IEKGFLPNPVDINLLIQSLCR---NQNVVGAKKYLEE 573
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 197/516 (38%), Gaps = 71/516 (13%)
Query: 15 STWDSA-QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
S W+ ++ L++L + V VL++ A FF W R + HD Y TML
Sbjct: 145 SNWNPKFEENLRHLLRSLNPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTML 204
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI---------- 123
DI + + + + LM +GI ++ VM S AG + A+ I
Sbjct: 205 DILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVE 264
Query: 124 -------------------------WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
E MK+ P IVSY +K R+ +A ++
Sbjct: 265 PDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALEL 324
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCC 217
EM +G PP+ +Y +M +L + K EE + M Q + + PD+ N LI
Sbjct: 325 IAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALS 384
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQ-FSPEFI 273
K G ++ LR +E + + + +F K D+ SL+ ++ + +P+ +
Sbjct: 385 KHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVV 444
Query: 274 SDNDAVE-FVTTDIEGPLSIDQGLVLILLK---KKNLVAIDSLLSGIMDKSIQLDSAVIS 329
+ ++ F G + + ++ + K K N V LL+G+ L++
Sbjct: 445 TYTAIIDGFCRV---GKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEA---R 498
Query: 330 TIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKA 389
+I V+ +H A+ Y A++ L + + ++ EM +
Sbjct: 499 EMINVSEEHWWTPNAI----------------TYSAVMHGLRREGKLSEACDLTREMIEK 542
Query: 390 GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADK 446
G LLI L + V A K + C +T++I + G D
Sbjct: 543 GFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLH-KGCAVNVVNFTSVIYGFCQIGDLDA 601
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
AL + + M HP T+ L L K R+ +A
Sbjct: 602 ALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEA 637
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 167/416 (40%), Gaps = 23/416 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFE-LMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G D+ +Y T++ + +++ +K + E ++Q + D VTY ++++ LS G D
Sbjct: 331 KGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHAD 390
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ E + K + V Y+A + N + +A + +M +G P+ TYT ++
Sbjct: 391 DALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAII 450
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKEN 235
+ R GK +EA ++ +M + G +P+ +L+ C G E R +I +
Sbjct: 451 DGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWT 510
Query: 236 RLALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
A+ Y L + K+++ D + F P P+ I+
Sbjct: 511 PNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLP-----------------NPVDINL 553
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ L + +N+V L + K ++ +++I C D AL E
Sbjct: 554 -LIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLS 612
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + + Y L L K + + +E++ +M G +IHR R
Sbjct: 613 NKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDM 672
Query: 415 AKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
K+ + Q Y +I G+ ++A K+ + R T ++L+
Sbjct: 673 MKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILI 728
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 34/166 (20%)
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
+ + KY+ E + KG ++ V +TSV++ GD+D A+++ E+M L +P ++YT
Sbjct: 565 VGAKKYLEECLH-KGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTT 623
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM----------------------- 178
L R+ EA+++ +M+ +G+ P TY ++
Sbjct: 624 LFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ 683
Query: 179 ----------EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
E L G EEA ++ K+ + D C+ILIE
Sbjct: 684 PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIE 729
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 175/431 (40%), Gaps = 60/431 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + D ++ M+ R+ + M E+G +D T T ++ G V+
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
V + +M P ++++TA + L +K+A ++ +EM++RG PN YT+T L++
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337
Query: 180 YLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + G E+A +F K+ + G +P+ +I CK + ++L M+E L
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397
Query: 239 LRYPVFKEALQ------TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ + F A E L+ + FSP + N I+G
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGK--EGFSPNIYTYNAI-------IDG---- 444
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
L KK +L LL+ + +Q D + ++ V+C + +L+ F +
Sbjct: 445 -------LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
K+ + +Y LI + + + EE SLG+ +
Sbjct: 498 KVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAV----SLGL----------------I 537
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
P K TYT++I Y G+ A+K+++ M G P T+ L++G
Sbjct: 538 PTKK-------------TYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISG 584
Query: 473 LEKLGRVSDAE 483
L K ++ DA
Sbjct: 585 LCKESKLDDAR 595
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
EKA+ F + RS G+ + TYT M++ + + +++ + + MQE+G+ + TYT+
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ G+ A + + M + P I +Y A + L + EA + ++ G
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
L + TYT+LM R +L F+KM + G PD + LI C+ + +
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMK 522
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 169/433 (39%), Gaps = 55/433 (12%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ V VM++ N G + AVN+ EM+ + + + + + V+ A +++
Sbjct: 154 NEVMQCMVMNFAEN-GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMF 212
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
EM QRG+ P+C ++ +++ G+ EA + + M E G D A C ++I+ C+
Sbjct: 213 VEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQK 272
Query: 220 GETRTIILILRYMKENRLALRYPVFKEAL----------QTFKVADENDSLLWQVHPQFS 269
G ++ M E LA F + Q F++ +E W+
Sbjct: 273 GYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWK------ 326
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAV 327
P + TT I+G L KK A L + + +
Sbjct: 327 PNVYTH-------TTLIDG------------LCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I C + + A + + L Y LI K+ F + E+++ M
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427
Query: 388 KAGHSLGVYLGALLIHRL---GS---ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSA 441
K G S +Y +I L GS A R + + L Q TYT L+ V+
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL----QADGVTYTILMSVHCRQ 483
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDA 501
+++L + M + G P + ++ L++ + ++ KE + + +A+S
Sbjct: 484 ADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQM-------KESERLFEEAVSLGL 536
Query: 502 VPMEEKICDLLYG 514
+P ++ ++ G
Sbjct: 537 IPTKKTYTSMICG 549
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Query: 11 ILKYSTWDSAQDLLKNLPI---KWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNH 64
+ K + D A LL + + + D T ++ H ++ +FFN + + GF
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV-GFTP 503
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +YTT++ F K++ + +FE G+ TYTS++ G+ AV ++
Sbjct: 504 DIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M C P ++Y A + L ++ +A ++Y M+ +GL P T L +
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKK 623
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
A+ + ++++ + N L+ K C G+
Sbjct: 624 DDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGK 657
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%)
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
F E ++ + MQ +G+ T V+ G V+ A N++ EM + P
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
VS+ + RV EA M++RG + T T++++ + G + F
Sbjct: 224 CVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
KM E G+ P+ LI CK G + +L M
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 84/155 (54%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
GF D FT+++++D AK+I F M G++ +AVTY ++H L GDV
Sbjct: 526 HGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPR 585
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
++ + +M+ P + S+ A ++ +V++A ++ M+ GL P+ YTY ++
Sbjct: 586 SMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIK 645
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
++G++ EA E+F M+ G PD CNI+++
Sbjct: 646 VFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILD 680
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 89/184 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ A +++ + F M + G+ + +Y V+ +D A N ++EM
Sbjct: 429 TYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEM 488
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ K P +V++ + + ++ D+ +++ G P+ +T++ +++ L RA +
Sbjct: 489 QYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQI 548
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
E+AL FS+M G+ P+ NILI C G+ + +LR M+ + + F
Sbjct: 549 EDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNAL 608
Query: 248 LQTF 251
+Q+F
Sbjct: 609 IQSF 612
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 79/162 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + T+ T++D + + I + + ++ E G D T++S++ L A ++
Sbjct: 491 KGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIED 550
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + EM + P V+Y + L + V + + ++M G+ P+ +++ L++
Sbjct: 551 ALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQ 610
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
R GK E+A ++FS M G+ PD I+ C++G
Sbjct: 611 SFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGR 652
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 166/429 (38%), Gaps = 24/429 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G++ + FTYT ++D F AK++ V E M+ + ++ T S +H + + A
Sbjct: 282 GYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKA 341
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ E +E ++ + L + +EA + K+ + G P+ T+ + M
Sbjct: 342 FELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNC 401
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L++ E I + E G++ + LI+ AG+ M ++ L
Sbjct: 402 LIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCN 461
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ + F D + N E I L L+
Sbjct: 462 VCSYNMVIDCFCKTSMMDK--------------ATNTFKEMQYKGIPPNLVTFNTLIDGY 507
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K + LL +++ + D S+II+ C ++ + AL F V L+
Sbjct: 508 CKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNA 567
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS- 419
Y LI L + P+ +++ +M G + V+ LI + A K+FS
Sbjct: 568 VTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSS 627
Query: 420 -----LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
L+P++ TY A I V+ +G ++A +++ +M G P T N++L L
Sbjct: 628 MLSLGLIPDNY----TYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALV 683
Query: 475 KLGRVSDAE 483
K + A+
Sbjct: 684 KQDQFEAAQ 692
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 171/445 (38%), Gaps = 46/445 (10%)
Query: 75 IFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+ G R+ KY E+ + GI+ Y +V+ L + +D A +++M
Sbjct: 188 LIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADN 247
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C P +Y + + + V EA + K+M G PN +TYT+L++ A K +EA
Sbjct: 248 CKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAF 307
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKA-GETRTIILILRYMKENRLALRYPVFKE---- 246
+ M+ V P +A I + + L + +++ R PV +
Sbjct: 308 RVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIE------REPVLQRLACD 361
Query: 247 ----ALQTFKVADENDSLLWQV----HPQFSPEF-ISDNDAVE-------------FVTT 284
L + +A E +LL + H S F I+ N ++ FV
Sbjct: 362 TLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQ 421
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
++ S L+ L + + + ++ + + + +I+ C D A
Sbjct: 422 GMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKA 481
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
F+ + + LI K K +++ + + G ++ + +I
Sbjct: 482 TNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDG 541
Query: 405 LGSARRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
L A++ A FS L P TY LI G +++K+ + M G
Sbjct: 542 LCRAKQIEDALGCFSEMVMWGLSPN----AVTYNILIHSLCIIGDVPRSMKLLRKMQTDG 597
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAE 483
I+P + +FN L+ ++G+V DA+
Sbjct: 598 INPDVFSFNALIQSFCRMGKVEDAK 622
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 107/196 (54%), Gaps = 4/196 (2%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
IK D YT N ++ M++ F+ + + +G + TY +++D + K ++
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK-QGIKPNFVTYNSLMDGYCLVKEVNKA 349
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
K +F M + G+N D +Y+ +++ D A+N+++EM K P +V+Y++ +
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + R+ A + +M RG+PP TY +++ L + + ++A+ + +K+++ G+QP+
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPN 469
Query: 206 KAACNILIEKCCKAGE 221
+ILI+ C++G+
Sbjct: 470 MYTYSILIKGLCQSGK 485
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 169/423 (39%), Gaps = 82/423 (19%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D T+TT++ +I + + G + D ++Y +++H L G+ A
Sbjct: 150 GYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ + + P +V Y + + V EA D++ EMI +G+ P+ TY+ L+
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISG 269
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
GK +A+++F+KM ++PD NIL+ CK G+ MKE +
Sbjct: 270 FCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK----------MKEGKTVF- 318
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
D ++ Q P F++ N S+ G L+
Sbjct: 319 -----------------DMMMKQ---GIKPNFVTYN--------------SLMDGYCLVK 344
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K +++ G ++ IQ S +I+ C ++ D A+ F+ + ++ +
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGF----CKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y +LI L K ++V++M G VP
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRG---------------------VPPT----- 434
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
TY +++ DKA+ + + KGI P++ T+++L+ GL + G++
Sbjct: 435 -------IRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLE 487
Query: 481 DAE 483
DA
Sbjct: 488 DAR 490
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 121/240 (50%), Gaps = 4/240 (1%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
D++ IK + T N ++ + + KA FN +++ G N D +Y+ M++ F +
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG-GVNPDIQSYSIMINGFCK 377
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
K+ +F+ M K I D VTY+S++ LS +G + A+ + ++M + PTI +
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRT 437
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y + + L +V +A + ++ +G+ PN YTY++L++ L ++GK E+A ++F +
Sbjct: 438 YNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLL 497
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
G + I+I+ C G + +L M++N ++ + + DEND
Sbjct: 498 VKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEND 557
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 161/399 (40%), Gaps = 59/399 (14%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T++D + K ++ +F M KGI+ D VTY++++ G ++ A++++ +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
L+ P + ++ + + ++KE V+ M+++G+ PN TY LM+ +
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFK 245
+A IF+ M + GV PD + +I+I CK + + + + M + + Y
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+ L L+ Q+H + P I +++ I +D+ +
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIH---QVDKAI--------- 455
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+LL+ + DK IQ + S +I+ C + + A FE
Sbjct: 456 -----ALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFE---------------- 494
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
G+L+K GH+L V ++I A + S + ED
Sbjct: 495 --GLLVK-----------------GHNLNVDTYTIMIQGFCVEGLFNEALALLSKM-EDN 534
Query: 426 KC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
C TY +I F D A K+ + M +G+ P
Sbjct: 535 GCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 154/376 (40%), Gaps = 34/376 (9%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+SY++ N+ V +A ++ +++R P + + ++ LV++ Y L +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ----- 249
KM+ G++P+ CNILI C+ G + + VF + L+
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLG---------------LIPFAFSVFAKILKMGYVP 153
Query: 250 ---TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
TF + L Q+ F F A+ F I I GL + +
Sbjct: 154 DTITFTTLIKGLCLKGQIQQAFL--FHDKVVALGFHFDQISYGTLI-HGLCKV---GETR 207
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
A+D LL + +Q + + +TII+ C + + A F + ++ + Y AL
Sbjct: 208 AALD-LLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL 266
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED-- 424
I L ++ +M VY +L++ + +F ++ +
Sbjct: 267 ISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
+ TY +L+ Y +KA I+ TM + G++P + ++++++ G K+ + +A
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 485 YRKE--KKSIQADALS 498
KE +K+I D ++
Sbjct: 387 LFKEMHRKNIIPDVVT 402
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 82/176 (46%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + D TY+ ++ F +++ +F M + I D T+ +++ G +
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++ M + P V+Y + M L V +A ++ M Q G+ P+ +Y++++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ K++EA+ +F +M + PD + LI+ K+G + ++ M +
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + +TY+ ++ ++ ++ + VFE + KG N++ TYT ++ G
Sbjct: 462 KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLF 521
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
+ A+ + +M+ C P +Y + LF D A + +EMI RG+ P
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
W+SA+ LLK + +K SY +++L + +KA+ + S G DR Y
Sbjct: 343 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS-GVRPDRHFYN 401
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
M+D FG+ + F+ M+E+GI D VT+ +++ G D A+ +++EM+
Sbjct: 402 VMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRES 461
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C +Y + +L R + + EM ++GL PN TYT L++ R+G+++EA
Sbjct: 462 NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEA 521
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++ M+ G++P + L+ + G + +++ M+ + L V +
Sbjct: 522 VDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINA 581
Query: 251 F 251
F
Sbjct: 582 F 582
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + TYTT++D++G + R E M+ G+ Y ++++ + G
Sbjct: 494 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+N+ + M+ + V + + + R+ EA V + M + GL P+ TYT L
Sbjct: 554 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 613
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M+ L+R ++E+ I+ +M +G PD+ A +L LRYMK R+
Sbjct: 614 MKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSA-------------LRYMKHMRV 660
Query: 238 A 238
A
Sbjct: 661 A 661
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 162/398 (40%), Gaps = 29/398 (7%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E + DA ++ ++ + A D A+ + + P + TA + L RV
Sbjct: 214 ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 273
Query: 154 EATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EA ++ E G + P Y L++ V+ G + A ++ +M + GV PD+A ++L
Sbjct: 274 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLL 333
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ----VHPQF 268
++ +AG + ++L+ M+ + + VF L F+ E WQ V +
Sbjct: 334 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGE-----WQKAFAVLREM 388
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSA 326
+ + V D G K N + A+D+ + ++ I+ D
Sbjct: 389 HASGVRPDRHFYNVMIDTFG--------------KYNCLGHAMDA-FDRMREEGIEPDVV 433
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+T+I+ +C R D A+ F+ + + L T Y +I +L + + V ++ EM
Sbjct: 434 TWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEM 493
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSA 444
+ G + L+ G + R A + D + Y AL+ Y G A
Sbjct: 494 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D AL + K M G+ S N L+ + R+++A
Sbjct: 554 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEA 591
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 132/331 (39%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D + A R S + + + M+ G+ + ++ ++ + G+ A
Sbjct: 322 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKA 381
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM P Y + + + A D + M + G+ P+ T+ L++
Sbjct: 382 FAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDA 441
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+++ A+E+F +M+E+ NI+I + + +L MKE L
Sbjct: 442 HCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-LSIDQGLVLI 299
+ + + S F D +E + D P ++ LV
Sbjct: 502 IITYTTLVDVYGR---------------SGRFKEAVDCIEAMKADGLKPSPTMYHALVNA 546
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
++ +++ + ++ + V++++I + RR A ++ + L +
Sbjct: 547 YAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPD 606
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
Y L+ LI++ F KV I EEM +G
Sbjct: 607 VITYTTLMKALIRVEQFEKVPVIYEEMITSG 637
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 161/417 (38%), Gaps = 24/417 (5%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
++ ++ F A+ + + Q G+ + T+++ L +A V A ++ E
Sbjct: 224 FSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFF 283
Query: 129 LK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L E P +Y A +K +K A V EM Q G+ P+ TY++L++ RAG++
Sbjct: 284 LAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRW 343
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL-------- 239
E A + +M+ GV+P + ++ GE + +LR M + +
Sbjct: 344 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVM 403
Query: 240 -----RYPVFKEALQTFKVADEN----DSLLWQVHPQFSPEFISDNDAVEFVTTDIEG-- 288
+Y A+ F E D + W + + A+E E
Sbjct: 404 IDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNC 463
Query: 289 PLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
PL ++I L +++ ++++L+ + ++ + + +T+++V R A+
Sbjct: 464 PLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVD 523
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
E L T Y AL+ + +V+ M G + LI+ G
Sbjct: 524 CIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 583
Query: 407 SARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
RR A + + E+ + TYT L+ +K IY+ M G P
Sbjct: 584 EDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAP 640
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 174/424 (41%), Gaps = 27/424 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
F Y + + R + ++ M+ G ++ TY+ + L D + +
Sbjct: 45 FDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSD 104
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M+ P I ++ Y+ +L ++V A + M+QRG P+ +YT+L+ L RAGK
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII-LILRYMKENRLALRYPVFK 245
+A+EI++ M +GV PD AC L+ C A + ++ +K R+ L V+
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 246 EALQTFKVAD--ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ F A E L + E + VT ++ D +LK+
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCE-------PDLVTYNVLLNYYYDNN----MLKR 273
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
V + + SG IQLD+ + +++ +C D ++ + +Y
Sbjct: 274 AEGVMAEMVRSG-----IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSY 328
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
LI + + K + EEM + G + V LI A K+ + E
Sbjct: 329 STLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE 388
Query: 424 -----DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
D+ YT ++ +G+ DKA ++ M I P ++N L++GL + GR
Sbjct: 389 LGLSPDR---IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 479 VSDA 482
V++A
Sbjct: 446 VTEA 449
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS---RGFNHDRFTYTTMLDIFGEAKRISSM 85
I+ D+Y+ NQ+LK H + +N++ + RGF D +Y+T+++ F A
Sbjct: 286 IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKA 344
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+FE M++KG+ ++ VTYTS++ G+ A + ++M P + YT +
Sbjct: 345 YRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDH 404
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + V +A V+ +MI+ + P+ +Y L+ L R+G+ EA+++F M+ PD
Sbjct: 405 LCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPD 464
Query: 206 KAACNILI 213
+ +I
Sbjct: 465 ELTFKFII 472
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
KA+ F + R +G + TYT+++ F S K + + M E G++ D + YT+
Sbjct: 342 RKAYRLFEEM-RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L +G+VD A ++ +M E P +SY + + L + RV EA ++++M +
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
P+ T+ ++ L+R K A +++ +M + G D+ + LI+ C
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 21/294 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+EKA +++S+ G D TY +L+ + + + + V M GI +DA +Y
Sbjct: 236 IEKAEALKSYMSKI-GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ D N + + +VSY+ ++ ++A +++EM Q+
Sbjct: 295 QLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK 354
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ N TYT L++ +R G A ++ +M E G+ PD+ +++ CK+G
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+ M E+ + A+ Y L E L + + E D +F+
Sbjct: 415 YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK---ECCPDELTFKFI 471
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
I G L++ K L A + +MDK LD V T+I+ +C
Sbjct: 472 ---IGG-----------LIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/491 (19%), Positives = 201/491 (40%), Gaps = 59/491 (12%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ K+ +ST S + + I + YT++ ++ + + + F+ +++ H
Sbjct: 68 LTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGH 127
Query: 65 --DRFTYTTML-DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D T+TT++ I+ E K I ++F+ M +G D VTY ++++ L G+ A+
Sbjct: 128 QPDTATFTTLIRGIYVEGK-IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAI 186
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ M K C P + +Y + L + +V EA +++ EM+ +G+ P+ +TY L+ L
Sbjct: 187 RLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHAL 246
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+++ + ++M ++ + PD + N +++ CK G
Sbjct: 247 CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG--------------------- 285
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
KV + +D + + P ++ ++ G L+
Sbjct: 286 ----------KVTEAHDVVDKMIQRGVEPNVVTYTALMD--------------GHCLLSE 321
Query: 302 KKKNLVAIDSLLS-GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
+ + D+++ G M I + T+I C +R D A+ F + +L +
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYN-----TLINGYCKIQRIDKAMYLFGEMCRQELIPDT 376
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI L + + EM + +L+ L R A +
Sbjct: 377 VTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA 436
Query: 421 LPE---DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ D A+ G+ AG + A ++ + KG+ P + T+++++ GL + G
Sbjct: 437 IEGSNLDPDIQVNNIAIDGMC-RAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRG 495
Query: 478 RVSDAEIYRKE 488
+ +A +E
Sbjct: 496 LLDEASKLFRE 506
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +Y T+++ + + +RI Y+F M + + D VTY++++H L + +
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 394
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ EM P +V+Y + L N + EA + K + L P+ + ++
Sbjct: 395 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 454
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ RAG+ E A ++FS + G+QPD +I+I C+ G + R M EN L
Sbjct: 455 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 514
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
++ + F +E + + + F +D
Sbjct: 515 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 550
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 124/280 (44%), Gaps = 17/280 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TYT ++D + VF+ M KG + ++Y ++++ +D
Sbjct: 300 RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 359
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ EM +E P V+Y+ + L +R+++A ++ EM+ PN TY +L++
Sbjct: 360 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 419
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
YL + EA+ + ++ + + PD NI I+ C+AGE + + L
Sbjct: 420 YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 479
Query: 239 ------------LRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDND---AVEFV 282
R + EA + F+ DEN L ++ + F+ +N+ A++ +
Sbjct: 480 DVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLL 539
Query: 283 TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ S D + + +K + +D L I+ + +Q
Sbjct: 540 QEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D+ ++ ++ + +R + F+ ++++ D V YTS++H AG++ A
Sbjct: 211 GCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEA 269
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EMK+ P + +Y+ + L + ++ A DV+ EMI G PN T+ LM
Sbjct: 270 ERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRV 329
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
V+AG+ E+ L+++++M+ G PD N LIE C+ + IL +K+
Sbjct: 330 HVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK 383
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 34/223 (15%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
P + FFNW + F H Y M+D+ G+ ++ + +LM+ + + I T+
Sbjct: 125 PFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETF 184
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL--------------FLND 150
T ++ AG AV+ + M+ C P ++++ + L L D
Sbjct: 185 TILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD 244
Query: 151 R--------------------VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
R + EA V+ EM G+ PN YTY+++++ L R+G+ A
Sbjct: 245 RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRA 304
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
++FS+M + G P+ N L+ KAG T ++ + MK
Sbjct: 305 HDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMK 347
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 32 DSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
++ T N +++ H EK +N + R G D TY +++ + +
Sbjct: 319 NAITFNNLMRVHVKAGRTEKVLQVYNQMKR-LGCPPDAITYNFLIESHCRDDNLEEAVKI 377
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
++ KG N++A ++ + +S GDV+ A ++ +MK +C P V+Y M++
Sbjct: 378 LNSVK-KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFAD 436
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM-QEAGVQPDKA 207
+ KEM + + PN TY VL+ G + A F +M +E ++P
Sbjct: 437 KKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLP 496
Query: 208 ACNILIEKCCKAGETR 223
+++++ KAG+ +
Sbjct: 497 VYEMVLQQLRKAGQLK 512
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 35/231 (15%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +TY+ ++D + +I+ VF M + G + +A+T+ ++M AG +
Sbjct: 280 GIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKV 339
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV---------------------- 158
+ ++ +MK C P ++Y ++ +D ++EA +
Sbjct: 340 LQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCI 399
Query: 159 ------------YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ +M PN TY +LM + L++ +M E ++P+
Sbjct: 400 SKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNA 459
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENR-LALRYPVFKEALQTFKVADE 256
+LI C G + M E + L PV++ LQ + A +
Sbjct: 460 NTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQ 510
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 152/361 (42%), Gaps = 39/361 (10%)
Query: 142 YMKILFLNDRVKE---ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
YM+++ L +V++ A + M R + T+T+L+ V+AG EA+ F++M+
Sbjct: 149 YMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRME 208
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
+ G +PDK A +++I + + R A+ F ++L K E D
Sbjct: 209 DYGCKPDKIAFSVVISS----------------LSKKRRAIEAQSFFDSL---KDRFEPD 249
Query: 259 SLLWQ--VHPQFSPEFISDNDAV--EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
+++ VH IS+ + V E I+ + ++ L + + + S
Sbjct: 250 VVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFS 309
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++D ++ + ++ V+ R + L + ++ + Y LI + +
Sbjct: 310 EMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDD 369
Query: 375 TFPKVAEIVEEMTKA----GHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--- 427
+ +I+ + K S G I +LG A ++F+ + +D KC
Sbjct: 370 NLEEAVKILNSVKKGCNLNASSFNPIFGC--ISKLGDVNS---AHRMFAKM-KDLKCRPN 423
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
T TY L+ ++ S D LK+ K M I P+ T+ VL++ +G ++A + K
Sbjct: 424 TVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFK 483
Query: 488 E 488
E
Sbjct: 484 E 484
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 174/422 (41%), Gaps = 22/422 (5%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++D + + + M+ KG+ VTY ++M WL GD++ ++ EM+
Sbjct: 297 YNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMR 356
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ P + Y + + L +A V K+M G P+ T++ L+ L + G+ +
Sbjct: 357 ERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQ 416
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA + + + P+ ++ LI C GE +L M E F +
Sbjct: 417 EAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALI 476
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
VA + L + + + D + I L+ L KKK L A
Sbjct: 477 HGLVVAGQVSEALLVREKMAARQLLPDAN--------------IYNVLISGLCKKKMLPA 522
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+L+ ++++++ D V +T+I+ + D A FE+ + ++ + Y A+I
Sbjct: 523 ARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIK 582
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQK 426
+ + E + M K G + LI G + + SLL + ++
Sbjct: 583 GYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLI---GGYAKQGNISGALSLLCDMMKRR 639
Query: 427 C---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
C Y++LI Y G D A ++ +M +G+ P++ T+ +L+ L K +V A
Sbjct: 640 CQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAA 699
Query: 484 IY 485
+Y
Sbjct: 700 MY 701
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 179/460 (38%), Gaps = 40/460 (8%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R R + Y +++D + + S V + M G + DA+T+++++ L G V
Sbjct: 356 RERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRV 415
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + E E P + SYT+ + + V A+++ EM++RG P+ T+ L
Sbjct: 416 QEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGAL 475
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ LV AG+ EAL + KM + PD N+LI CK ++ M E +
Sbjct: 476 IHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNV 535
Query: 238 A-------------LRYPVFKEALQTFKVADEN----DSLLWQVHPQFSPEFISDNDAVE 280
+R EA + F+ ++ D + + + +F N+AVE
Sbjct: 536 HPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVE 595
Query: 281 FVTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
++T + D+ L+ K+ N+ SLL +M + Q + S++I C
Sbjct: 596 CMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYC 655
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
D A F L Y LIG L K + + A E M S Y
Sbjct: 656 KLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDY 715
Query: 397 LGALLIHRLGSARRPVPAAK---------------IFSLLPEDQKCTATYTALIGVYFS- 440
L+ L ++ + ++ IF L D +C +A + FS
Sbjct: 716 TLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVND-RCDPRNSAYNAIIFSL 774
Query: 441 --AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+AL + M KG P TF LL G +G+
Sbjct: 775 CIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK 814
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 143/402 (35%), Gaps = 86/402 (21%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A +++EM +E S ++ L L V++ + + G PN Y VL
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ R G + + +M+ G+ P L+ + G+ I +L M+E RL
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
++ S+ L
Sbjct: 361 PPNVQIYN---------------------------------------------SVIDALC 375
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
+ LV + + +G D D+ ST+I C R A + + +LN
Sbjct: 376 KCRSASQALVVLKQMFAGGCDP----DAITFSTLISGLCQEGRVQEAERLLRETTRWELN 431
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL------------ 405
++Y +LI + ++ EM + GH+ V LIH L
Sbjct: 432 PNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLV 491
Query: 406 ---GSARRPVPAAKIFS----------LLPEDQKCTA------------TYTALIGVYFS 440
+AR+ +P A I++ +LP + YT LI +
Sbjct: 492 REKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIR 551
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
S D+A KI++ M +KGIHP + +N ++ G + G +++A
Sbjct: 552 NESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEA 593
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 82/216 (37%), Gaps = 50/216 (23%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D FTYTT++ + + IS + M ++ + V Y+S+++ GD
Sbjct: 601 RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDT 660
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++ M+ + +P +++YT + LF D+V A ++ M+ PN YT L
Sbjct: 661 DAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSL 720
Query: 178 MEYLV-------------------------------------RAGKYE------------ 188
+ L R Y
Sbjct: 721 VTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNML 780
Query: 189 -EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
EAL++ +KM G +PD A L+ C G++R
Sbjct: 781 GEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSR 816
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 7/228 (3%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIK---WDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRG 61
++ + WD A+ +L + K +S N + L +++A + +S+G
Sbjct: 393 LHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEM-KSQG 451
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
D TY T++ ++ +++F + E+G+ + +TY +++H L ++G +
Sbjct: 452 CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGL 511
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+ EM L C +VSY +K L V + + +EM+ +G+ PN ++Y +L+ L
Sbjct: 512 RLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINEL 571
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+AGK +ALE+ +M G+ PD N LI CK G T + +L
Sbjct: 572 CKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 619
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY+T+L F + + + M KG ++++ Y +++ L G +D
Sbjct: 380 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDE 439
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + +EMK + C P I +Y + L ND++ EA ++ +++ G+ N TY L+
Sbjct: 440 AMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIH 499
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L+ +G+++E L + ++M G D + N LI+ CK G +++L M
Sbjct: 500 ALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 166/454 (36%), Gaps = 67/454 (14%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FT+ R + M G DAV Y +V+H L G V A + +E
Sbjct: 181 FTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDE 240
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA-- 184
M L C + ++ + L V+EA + M+ G P+ TY L+ L R
Sbjct: 241 MLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQ 300
Query: 185 -----------------------------GKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
GK A E++ M G PD NIL+
Sbjct: 301 ADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHG 360
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEF 272
CK G + + +L M+E A + L +F + D+ ++L Q+
Sbjct: 361 LCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM-------- 412
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+ + + + +G G++ L K L L+ + + + D +TII
Sbjct: 413 -----SAKGFSMNSQG----YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTII 463
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C++ + D A F ++ + Y LI L+ + + + EM G
Sbjct: 464 YHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCP 523
Query: 393 LGVYLGALLIHRL---GSARRPVPAAKIFSLLPEDQKCTA------TYTALIGVYFSAGS 443
L V LI L G+ R + +L E+ +Y LI AG
Sbjct: 524 LDVVSYNGLIKALCKEGNVDRSM-------MLLEEMMTKGIKPNNFSYNMLINELCKAGK 576
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
AL++ K M +G+ P + T+N L+ GL K+G
Sbjct: 577 VRDALELSKEMLNQGLTPDIVTYNTLINGLCKVG 610
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 14/306 (4%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+++ ++E+M KG D TY +MH L G AV + +EM+ K C P IV+Y+
Sbjct: 331 KLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYS 390
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ N +A + +M +G N Y ++ L + GK +EA+ + +M+
Sbjct: 391 TLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQ 450
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
G +PD N +I C + I + E + + + +
Sbjct: 451 GCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGR---- 506
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
WQ + + E + ++ V+ + GL+ L K+ N+ LL +M K
Sbjct: 507 -WQEGLRLANEMVLHGCPLDVVSYN---------GLIKALCKEGNVDRSMMLLEEMMTKG 556
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I+ ++ + +I C + AL + + L + Y LI L K+
Sbjct: 557 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 616
Query: 381 EIVEEM 386
++E++
Sbjct: 617 NLLEKL 622
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/462 (20%), Positives = 180/462 (38%), Gaps = 65/462 (14%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y T++ ++ + + M G D T+ V+ L G V A +
Sbjct: 214 DAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLV 273
Query: 125 EEMKLKECYPTIVSYTAYMK----------------------ILFLN---------DRVK 153
+ M + C P++V+Y ++ ++ LN ++
Sbjct: 274 DRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLA 333
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
AT++Y+ M +G PP+ +TY +LM L + G+ A+ + +M+E G P+ + L+
Sbjct: 334 RATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLL 393
Query: 214 EKCCKAGETRTIILILRYMKENRLALR---YPVFKEALQTFKVADENDSLLWQVHPQ-FS 269
C+ G +L M ++ Y AL DE L+ ++ Q
Sbjct: 394 HSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCK 453
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVIS 329
P+ + N + + + + +D+ + + ++++ + + +
Sbjct: 454 PDICTYNTIIYHLCNNDQ----MDEA--------------EHIFGNLLEEGVVANGITYN 495
Query: 330 TIIEVNCDHRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
T+I R ++G LA E V L+ +Y LI L K + ++EEM
Sbjct: 496 TLIHALLHSGRWQEGLRLANEM-VLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMT 554
Query: 389 AGHSLGVYLGALLIHRL---GSARRPVPAAKIF---SLLPEDQKCTATYTALIGVYFSAG 442
G + +LI+ L G R + +K L P+ TY LI G
Sbjct: 555 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPD----IVTYNTLINGLCKVG 610
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
AL + + + + +HP + T+N+L++ K+ + DA +
Sbjct: 611 WTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASM 652
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G + F+Y +++ +A ++ + + M +G+ D VTY ++++ L G
Sbjct: 554 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 613
Query: 119 GAVNIWEEMKLKECYPTIVSYTA----YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
A+N+ E++ + +P IV+Y + K+ L+D A+ + + + G+ PN T+
Sbjct: 614 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDD----ASMLLDKAVSGGIVPNERTW 669
Query: 175 TVLMEYLVR 183
++++ VR
Sbjct: 670 GMMVQNFVR 678
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 44/250 (17%)
Query: 8 VYKILKYSTWDSAQDL---LKNLPIKWDSYTVNQV---LKTHPPMEKA-WLFFNWVSRSR 60
+Y + K D A L +K+ K D T N + L + M++A +F N +
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE-- 485
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + TY T++ + R + M G +D V+Y ++ L G+VD +
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRS 545
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN---------- 170
+ + EEM K P SY + L +V++A ++ KEM+ +GL P+
Sbjct: 546 MMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 605
Query: 171 -C------------------------YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
C TY +L+ + + ++A + K G+ P+
Sbjct: 606 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPN 665
Query: 206 KAACNILIEK 215
+ ++++
Sbjct: 666 ERTWGMMVQN 675
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P+ SY A + L D +A +Y+ M++ +PP +T+ V L R G+ +AL +
Sbjct: 143 PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALAL 202
Query: 194 FSKMQEAGVQPD 205
M G PD
Sbjct: 203 LRGMARHGCVPD 214
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 184/425 (43%), Gaps = 24/425 (5%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP-TI 136
E K +MK +F + +G D + ++ + D+ A+++ EM+ K P +
Sbjct: 252 ERKPEEAMK-IFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQ 310
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+YT+ + ++EA V EM+ G+P + T L+ + +AL+ F++
Sbjct: 311 ETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNR 370
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
M+E G+ PDK +++IE CK E + I + MK +A + + +Q
Sbjct: 371 MEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQ------- 423
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI 316
L P+ + E +D+ F T G + + L+L K+ + A S L +
Sbjct: 424 --GCLKAESPEAALEIFNDS----FETWIAHGFMC--NKIFLLLCKQGKVDAATSFLRMM 475
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+K I+ + + ++ +C + D A F ++ L Y LI K
Sbjct: 476 ENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDE 535
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK----CTATYT 432
E++ +M + + +I+ L + A ++ L ++++ CT +Y
Sbjct: 536 QNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCT-SYN 594
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA--EIYRKEKK 490
++I +F G D A++ Y+ M GI P++ TF L+ G K R+ A I+ + K
Sbjct: 595 SIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSK 654
Query: 491 SIQAD 495
++ D
Sbjct: 655 DLKLD 659
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 169/390 (43%), Gaps = 32/390 (8%)
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L G VD A + M+ K P +V Y M + A ++ EM+++GL PN
Sbjct: 459 LCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPN 518
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
+TY++L++ + + A E+ ++M + + ++ N +I CK G+T +L+
Sbjct: 519 NFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 231 YM-KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND------------ 277
+ KE R ++ + + F + DS + + + + S IS N
Sbjct: 579 NLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAV-EAYREMSENGISPNVVTFTSLINGFCK 637
Query: 278 ------AVEFVTTDIEGPLSID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
A+E + L +D L+ KK ++ +L S +++ + + +V
Sbjct: 638 SNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSV 697
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+ +I + + D A+ ++ V ++ + Y +I L+K +++ E+
Sbjct: 698 YNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELL 757
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT-----YTALIGVYFSAG 442
G L +L++ L + V A+K +L E +K AT Y+ +I + G
Sbjct: 758 ALGIVPDEILYVVLVNGLSKKGQFVRASK---MLEEMKKKDATPNVLIYSTVIAGHHREG 814
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ ++A +++ M KG+ FN+L++G
Sbjct: 815 NLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 159/450 (35%), Gaps = 92/450 (20%)
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK- 128
T+++ F + F M+E+G+ D V ++ ++ W +++ AV I++ MK
Sbjct: 349 TSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKS 408
Query: 129 -----------------------------LKECYPTIVSYTAYMKILFL----NDRVKEA 155
+ + T +++ +FL +V A
Sbjct: 409 VGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAA 468
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
T + M +G+ PN Y +M R + A IFS+M E G+QP+ +ILI+
Sbjct: 469 TSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDG 528
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
FK DE ++ W+V Q
Sbjct: 529 ----------------------------------FFKNQDEQNA--WEVINQMIASNFEA 552
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N+ + T I G + Q A + L + I +K + ++II+
Sbjct: 553 NEVI--YNTIINGLCKVGQ----------TSKAKEMLQNLIKEKRYSMGCTSYNSIIDGF 600
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
D A+ A+ + ++ + +LI K N E++ EM L V
Sbjct: 601 FKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDV 660
Query: 396 YLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALK 449
LI A +FS L+P + Y LI + + G D A+
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELLELGLMPN----VSVYNNLISGFRNLGKMDAAID 716
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+YK M GI L T+ ++ GL K G +
Sbjct: 717 LYKKMVNDGISCDLFTYTTMIDGLLKDGNL 746
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +++D F + S + M E GI+ + VT+TS+++ + +D A+ + EM
Sbjct: 592 SYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEM 651
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K+ + +Y A + + +K A ++ E+++ GL PN Y L+ GK
Sbjct: 652 KSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKM 711
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ A++++ KM G+ D +I+ K G
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG 744
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFE-LMQEKGINIDAVTYT 105
+ AW N + S F + Y T+++ + + S K + + L++EK ++ +Y
Sbjct: 536 QNAWEVINQMIAS-NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYN 594
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ GD D AV + EM P +V++T+ + ++R+ A ++ EM +
Sbjct: 595 SIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSK 654
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
L + Y L++ + + A +FS++ E G+ P+ + N LI G+
Sbjct: 655 DLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAA 714
Query: 226 ILILRYM 232
I + + M
Sbjct: 715 IDLYKKM 721
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D AV+ + M + P + + L ++ + EA ++Y +M+ G+ + T +
Sbjct: 185 MDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQL 244
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
LM +R K EEA++IF ++ G +PD ++ ++ CK + + +LR M+E
Sbjct: 245 LMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMRE 302
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ F ++ + +++ M GI+ D TYT+++ L G++ A +++ E+
Sbjct: 698 YNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELL 757
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P + Y + L + A+ + +EM ++ PN Y+ ++ R G
Sbjct: 758 ALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLN 817
Query: 189 EALEIFSKMQEAGVQPDKAACNILI 213
EA + +M E G+ D N+L+
Sbjct: 818 EAFRVHDEMLEKGLVHDDTIFNLLV 842
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 84/185 (45%), Gaps = 5/185 (2%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFT--YTTMLDIFGEAKRISSMKYVFELMQEKGI 97
+ ++P + + + N V S+ F+ + + + +L+ + +R+ F LM ++ +
Sbjct: 141 VSSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNV 200
Query: 98 NIDAVTY-TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
+ V Y +V+ L + +D A I+ +M L V+ M+ + +EA
Sbjct: 201 -VPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAM 259
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE-AGVQPDKAACNILIEK 215
+++ ++ RG P+ +++ ++ + AL++ +M+E GV + +I
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVA 319
Query: 216 CCKAG 220
C K G
Sbjct: 320 CVKEG 324
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY+T++D + + ++VF M G+ D +YT +++ VD A+N++
Sbjct: 303 DVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLF 362
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM K P IV+Y++ + L + R+ D+ EM RG+P N TY L++ L +
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKN 422
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G + A+ +F+KM++ G++P IL++ CK G +
Sbjct: 423 GHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLK 461
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 191/476 (40%), Gaps = 84/476 (17%)
Query: 10 KILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRF 67
KI YST S L+ I+ D T+N ++ M + F+ +++ RG+
Sbjct: 71 KIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTI 130
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+TT++ +++ + + + +GI D V+Y ++++ + GD GA+ + ++
Sbjct: 131 TFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI 190
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P + Y + L V EA ++ EM +G+ + TYT L+ A K
Sbjct: 191 DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKL 250
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+EA+ + ++M + P+ NIL++ CK G
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEG--------------------------- 283
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
KV + + L + P+ I+ +T ++G LV L K +++
Sbjct: 284 ----KVKEAKNVLAVMLKACVKPDVIT-------YSTLMDGYF-----LVYELKKAQHVF 327
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
SL+ + D + +I C ++ D AL F+ + ++ Y +LI
Sbjct: 328 NAMSLM------GVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L K V ++++EM G +PA I
Sbjct: 382 DGLCKSGRISYVWDLIDEMRDRG---------------------IPANVI---------- 410
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TY +LI G D+A+ ++ M +GI P TF +LL GL K GR+ DA+
Sbjct: 411 --TYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQ 464
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FN +S G D +YT +++ F + K + +F+ M +K + VTY+
Sbjct: 320 LKKAQHVFNAMSL-MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L +G + ++ +EM+ + +++Y + + L N + A ++ +M +
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P +T+T+L++ L + G+ ++A E F + G D N++I CK G
Sbjct: 439 GIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADEND 258
+ +L M+EN F + DEND
Sbjct: 499 LTMLSKMEENGCVPNAVTFDIIINALFKKDEND 531
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 90/165 (54%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY++++D ++ RIS + + + M+++GI + +TY S++ L G +D A+ ++ +M
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKM 435
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + P ++T + L R+K+A + +++++ +G + Y Y V++ + G
Sbjct: 436 KDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLL 495
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
EEAL + SKM+E G P+ +I+I K E +LR M
Sbjct: 496 EEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 162/397 (40%), Gaps = 59/397 (14%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T++D + + +S +F M KGI+ D VTYT++++ A + A+ + EM
Sbjct: 202 YNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMV 261
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
LK P + +Y + L +VKEA +V M++ + P+ TY+ LM+ + +
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELK 321
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
+A +F+ M GV PD + ILI CK
Sbjct: 322 KAQHVFNAMSLMGVTPDVHSYTILINGFCKN----------------------------- 352
Query: 249 QTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
K+ DE +L ++H + P ++ ++ I+G L K +
Sbjct: 353 ---KMVDEALNLFKEMHQKNMVPGIVT-------YSSLIDG-----------LCKSGRIS 391
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ L+ + D+ I + +++I+ C + D A+ F + + L+
Sbjct: 392 YVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILL 451
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--PAAKIFSLLPEDQ 425
L K E +++ G+ L VY ++I+ G ++ + A + S + E+
Sbjct: 452 DGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMIN--GHCKQGLLEEALTMLSKM-EEN 508
Query: 426 KCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
C T+ +I F DKA K+ + M +G+
Sbjct: 509 GCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A FN + + +G FT+T +LD + R+ + F+ + KG ++D Y
Sbjct: 425 LDRAIALFNKM-KDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYN 483
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G ++ A+ + +M+ C P V++ + LF D +A + ++MI R
Sbjct: 484 VMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICR 543
Query: 166 GL 167
GL
Sbjct: 544 GL 545
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 136/356 (38%), Gaps = 31/356 (8%)
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V +A + M+ P + +++ + Y A+ + +++ G+QPD NI
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 212 LIEKCCKAGE-TRTIILILRYMKENRL--ALRYPVFKEAL----QTFKVADENDSLLWQV 264
LI C G+ T ++ + +K + + + L Q K +D LL Q
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159
Query: 265 HPQFSPEF---------ISDNDAVEFVTTDIEGPLS-----IDQGLVLILLKKKNLVAID 310
+ I D + I+G L+ + ++ L K + +
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
L S + K I D +T+I C + A+ V +N Y L+ L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYL------GALLIHRLGSARRPVPAAKIFSLLPED 424
K + ++ M KA V G L++ L A+ A + + P+
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPD- 338
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
+YT LI + D+AL ++K M +K + P + T++ L+ GL K GR+S
Sbjct: 339 ---VHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIS 391
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 191/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNX 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E Y LI K + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ A K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVBSEKSAYNSLVQSXLKKNEPXDAK 458
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 8/334 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G +L+ M +
Sbjct: 263 PGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSV 322
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ ++ F + D + + + I + + P ++
Sbjct: 323 PTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP------MI 376
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L ++L+ + +Q D ++T+I + D A + ++ +B
Sbjct: 377 EYLCNNGQAXKAETLVRQLXKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVB 435
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
E++AY +L+ +K N ++ M + H
Sbjct: 436 SEKSAYNSLVQSXLKKNEPXDAKAALDSMIENDH 469
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y L V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 186/462 (40%), Gaps = 53/462 (11%)
Query: 41 KTHPPMEKAWLFFNWVSRSRGFNH--DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
+ H P E FF+W S+ + + F+ +++L + + S ++ + ++M+ K +
Sbjct: 40 QIHDP-EMGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLM 98
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEE-MKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
++ V+ ++ G VD A+ + +K+ C P + S + + +L + +V+ A
Sbjct: 99 PTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACK 158
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
VY EM+ R + YT ++++ L + GK E+ ++ K G P+ N LI+ C
Sbjct: 159 VYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYC 218
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
K G+T ++ + +K + + F + + + D
Sbjct: 219 KKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFE--------------VVDKL 264
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
VE ++ + I ++ K + + ++ D A + +I +C
Sbjct: 265 LVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCS 324
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
A E ++K L + +Y LI K + + +++ +M++ GH
Sbjct: 325 CGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHK----- 379
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
P+ TY ALI AG D AL + M K
Sbjct: 380 ------------------------PD----LVTYAALIHGLIVAGEVDVALTVRNKMVEK 411
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADAL 497
G+ P +NVL++GL K GR+ A++ E +++ DA
Sbjct: 412 GVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAF 453
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 178/451 (39%), Gaps = 24/451 (5%)
Query: 32 DSYTVNQVLK---THPPMEKAWLFFN--WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
D+YTV ++K +E W W RG + Y T++D + +
Sbjct: 171 DNYTVCIMVKGLCKEGKVEDGWKLIEKRW---GRGCMPNIVFYNTLIDGYCKKGDTERAN 227
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+F+ ++ KG TY ++++ G + + EM + +I Y +
Sbjct: 228 VLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQ 287
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
F + EA D MI+ G P+ TY +L+ G+ +A ++ + + G+ P+K
Sbjct: 288 FKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNK 347
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
+ LI CK GE + +L M E + + VA E D L +
Sbjct: 348 VSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNK 407
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ D + + + L KK L A LL+ ++D+++ D+
Sbjct: 408 MVEKGVLPDANIYNVLMSG--------------LCKKGRLPAAKVLLAEMLDQNVAPDAF 453
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+ +T+++ H + A FE +++ ++ Y A+I K + M
Sbjct: 454 ITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRM 513
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSA 444
+ HS + + +I A ++F L+ + + TYT LI + +G
Sbjct: 514 IQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDI 573
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++A K +K M + P++ T+ +L+ K
Sbjct: 574 NRAEKTFKQMLSLRLKPNVVTYTILIGCFCK 604
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 1/171 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H E+A F ++ +G + Y M+ + + + F+ M + + D
Sbjct: 465 HGDFEEAKKLFE-LTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEF 523
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
TY++++ D+ GA+ ++ M C P +V+YT + L+ + A +K+M
Sbjct: 524 TYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQM 583
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+ L PN TYT+L+ + +A F +M P+ N L+
Sbjct: 584 LSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLM 634
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY+T++D + + + +F LM + + VTYT +++ +GD++ A +
Sbjct: 521 DEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTF 580
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
++M P +V+YT + + +A +++M+ PN TY LM L
Sbjct: 581 KQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 15/217 (6%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT +++ F + I+ + F+ M + + VTYT ++ ++ A + +E+M
Sbjct: 559 TYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQM 618
Query: 128 KLKECYPTIVSYTAYMKIL------FLNDRVKEAT------DVYKEMIQRGLPPNCYTYT 175
+++C P V+Y M L ++++ E T + + MI G +Y
Sbjct: 619 LMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYN 678
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR---TIILILRYM 232
++ L + + AL + KM G PD + L+ C G ++ +I
Sbjct: 679 SILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNE 738
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
+E ++A++Y +A + E +L + QFS
Sbjct: 739 RELQVAVKYSEKLDAFLSQGQTSEASLILHSLADQFS 775
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 200/510 (39%), Gaps = 94/510 (18%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+LD + R +M V+ M +G + + VTY +++ GD A +++EM K+
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+PT+V YT ++ L R+ EA +++ M G+ PN YTY +M+ + ++AL
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 192 EIFSKM-----------------------------------QEAGVQPDKAACNILIEKC 216
E++ +M GV P+ N LI+
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343
Query: 217 CKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEF 272
CKAG + + ++++ + Y + + L +E D LL ++ + F P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
++ N T I+G K+ N+ + S + +K I+ + ST+I
Sbjct: 404 VTYN-------TLIDG-----------YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C + + A+ + V L + AY ALI K + + +EM +AG
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIF------------------SLLPEDQKCTATYTAL 434
V+ + LI L R A K+F SL + YTAL
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNH---VMYTAL 562
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG----------------LEKLGR 478
I + G KA K + M G+ P + T V++ G + K+G
Sbjct: 563 IQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622
Query: 479 VSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
+ ++ +YR K + K A+ E +
Sbjct: 623 IPNSSVYRVLAKGYEESGYLKSALRCSEDL 652
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +GF + TY T++D + + + V M EKGI + +T+++++ AG +
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ ++ EM +K P +V+YTA + F + KEA ++KEM + GL PN +T + L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L + G+ +A+++F + + G + N L C LI + R+
Sbjct: 515 IDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 82/157 (52%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY+ ++ R+ + + M++KG +AVTY +++ G+++ A+ +
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M K P I++++ + +++ A +Y EM+ +GL P+ YT L++ +
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
G +EA + +MQEAG+ P+ + LI+ CK G
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + F Y ++D + +A +S + +++ I D TY+ ++ L ++
Sbjct: 326 SFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRME 385
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + +EMK K P V+Y + +++A +V +M ++G+ PN T++ L+
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ +AGK E A+ ++++M G+ PD A LI+ K G T+ + + M+E L
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 160/434 (36%), Gaps = 52/434 (11%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNA 114
R+ G + +TY TM+D + +I+ +K EL QE G+ + VT+ ++ L
Sbjct: 255 RNSGMLPNLYTYNTMMDGYC---KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKT 311
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
++ A +M P I Y + + EA ++ E+ + + P+ +TY
Sbjct: 312 DEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTY 371
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++L++ L + EEA + +M++ G P+ N LI+ CK G I + M E
Sbjct: 372 SILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE 431
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ F + + A + ++ + + D V T I+G
Sbjct: 432 KGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD---VVAYTALIDGH----- 483
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
K N L + + + + +S +I+ C R A+ F
Sbjct: 484 ------FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGT 537
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
D T K E+ + H + LI L + R A
Sbjct: 538 D------------------TTGSKTNELDRSLCSPNH----VMYTALIQGLCTDGRIFKA 575
Query: 415 AKIFSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
+K FS D +C+ T +I +F A + + + + GI P+ + V
Sbjct: 576 SKFFS----DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631
Query: 469 LLAGLEKLGRVSDA 482
L G E+ G + A
Sbjct: 632 LAKGYEESGYLKSA 645
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 117/233 (50%), Gaps = 4/233 (1%)
Query: 29 IKWDSYTVNQVLKTHP---PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+K D +T N ++ + ++KA FN +S G D TYT +++ F ++K +
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL-MGVTPDVHTYTILINGFCKSKMVDEA 606
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+F+ M +K + D VTY+S++ L +G + ++ +EM+ + +++Y + +
Sbjct: 607 LNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDG 666
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L N + +A ++ +M +G+ PN +T+T+L++ L + G+ ++A E+F + G D
Sbjct: 667 LCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLD 726
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
N++I CK G + +L M+EN F + DEND
Sbjct: 727 VYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDEND 779
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 182/453 (40%), Gaps = 42/453 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+ N + TY ++D + ++ K V +M + + + +TY+++M +V
Sbjct: 197 KTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKK 256
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A +++ M L P + SY + RV +A +++KEMI PP + +++
Sbjct: 257 AQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILD 315
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYMKENRLA 238
+ Y A+ + +++ G+QPD NILI C G+ T ++ + +K
Sbjct: 316 SFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG--- 372
Query: 239 LRYPVFKEALQTF-----------KVADENDSLLWQVHPQFSPEF---------ISDNDA 278
YP L T K +D LL Q + I D
Sbjct: 373 --YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430
Query: 279 VEFVTTDIEGPLS-----IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ I+G L+ + ++ L K + + L S + K I D ST+I
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490
Query: 334 VNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSL 393
C + A+ V +N + Y L+ L K + ++ M KA
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550
Query: 394 GVYL------GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
V+ G LL++ + A+ A + + P+ TYT LI + + D+A
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPD----VHTYTILINGFCKSKMVDEA 606
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
L ++K M +K + P T++ L+ GL K GR+S
Sbjct: 607 LNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRIS 639
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 163/397 (41%), Gaps = 59/397 (14%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y+T++D + + +S +F M KGI+ D VTY+++++ G + A+ + EM
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
LK P + +YT + L +VKEA V M++ + P+ +TY LM + + +
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
+A +F+ M GV PD ILI CK+
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKS----------------------------- 600
Query: 249 QTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
K+ DE +L ++H + P+ ++ + V+ L K +
Sbjct: 601 ---KMVDEALNLFKEMHQKNMVPDTVTYSSLVDG------------------LCKSGRIS 639
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ L+ + D+ D +++I+ C + D A+ F + + L+
Sbjct: 640 YVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILL 699
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--PAAKIFSLLPEDQ 425
L K E+ +++ G+ L VY+ ++I+ G ++ + A + S + E+
Sbjct: 700 DGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIY--GHCKQGLLEEALTMLSKM-EEN 756
Query: 426 KC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
C T+ +I F DKA K+ + M +G+
Sbjct: 757 GCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 91/168 (54%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY++++D ++ RIS + + + M+++G D +TY S++ L G +D A+ ++
Sbjct: 621 DTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALF 680
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+MK + P ++T + L R+K+A +V+++++ +G + Y Y V++ +
Sbjct: 681 NKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQ 740
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
G EEAL + SKM+E G P+ +I+I K E +LR M
Sbjct: 741 GLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 35/199 (17%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMK--------------------------------- 86
+ N D TYT ++D G+ ++ K
Sbjct: 511 KTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKK 570
Query: 87 --YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+VF M G+ D TYT +++ + VD A+N+++EM K P V+Y++ +
Sbjct: 571 AQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD 630
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L + R+ D+ EM RG P + TY L++ L + G ++A+ +F+KM++ G++P
Sbjct: 631 GLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRP 690
Query: 205 DKAACNILIEKCCKAGETR 223
+ IL++ CK G +
Sbjct: 691 NTFTFTILLDGLCKGGRLK 709
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 177/417 (42%), Gaps = 17/417 (4%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y T++D + + +S +F M KGI+ + VTY+++++ G + A+ + M
Sbjct: 136 YNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMV 195
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
LK P + +Y + L +VKEA V M++ + N TY+ LM+ + +
Sbjct: 196 LKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVK 255
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
+A +F+ M GV PD + NI+I CK + + + M +R F +
Sbjct: 256 KAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSR-------FPPII 308
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
Q K+ D + +S +S + +E I+ L L+ +
Sbjct: 309 QFNKILDS-----FAKMKHYSTA-VSLSHRLEL--KGIQPDLFTLNILINCFCHMGQITF 360
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
S+L+ I+ + + ++T+I+ C + AL + + L + +Y LI
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 420
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
+ K+ +++ ++ V + + +I L + A +FS +
Sbjct: 421 GVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 480
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TY+ LI + G +A+ + M K I+P + T+ +L+ L K G+V +A+
Sbjct: 481 DVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAK 537
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ L + + +A+ F+ ++ +G + D TY+T++ F ++ + M
Sbjct: 452 TIIDALCKYQLVSEAYGLFSEMT-VKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL 510
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY-PTIVSYTAYMKILFLNDRVK 153
K IN D TYT ++ L G V A ++ M LK C P + +Y M L VK
Sbjct: 511 KTINPDVRTYTILVDALGKEGKVKEAKSVLAVM-LKACVKPDVFTYNTLMNGYLLVYEVK 569
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+A V+ M G+ P+ +TYT+L+ ++ +EAL +F +M + + PD + L+
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629
Query: 214 EKCCKAGE 221
+ CK+G
Sbjct: 630 DGLCKSGR 637
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG+ D T T++ ++ + + + +G ++ V+Y ++++ + GD
Sbjct: 57 RGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRA 116
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ + P + Y + L V EA ++ EM +G+ N TY+ L+
Sbjct: 117 AIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIY 176
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
GK +EAL + + M + P+ NIL++ CK G+ +
Sbjct: 177 GFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA FN + + +G + FT+T +LD + R+ + VF+ + KG ++D Y
Sbjct: 673 LDKAIALFNKM-KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYN 731
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G ++ A+ + +M+ C P V++ + LF D +A + ++MI R
Sbjct: 732 VMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791
Query: 166 GL 167
GL
Sbjct: 792 GL 793
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 126/349 (36%), Gaps = 62/349 (17%)
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
V ++++RG PP+ T L++ L G+ +EAL K+ G Q ++ + LI C
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109
Query: 218 KAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDND 277
+ G+TR I LR + + RLA P
Sbjct: 110 RIGDTRAAIKFLRKI-DGRLA------------------------------KPN------ 132
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
VE T I+ L K + + L S + K I + ST+I C
Sbjct: 133 -VEMYNTIIDA-----------LCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+ AL V +N Y L+ L K + ++ M KA V
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240
Query: 398 ------GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
G L++ + A+ A + + P+ +Y +I + DKAL ++
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD----VHSYNIMINGFCKIKRVDKALNLF 296
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
K M P + FN +L K+ S A +R E K IQ D +
Sbjct: 297 KEMILSRFPPII-QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFT 344
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 199/499 (39%), Gaps = 46/499 (9%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
L++ P+ ++ V+ +L+ ++A +R+ G + ++ A R +
Sbjct: 97 LRSRPLH--AHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHA 154
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
F M E A Y +++ L ++G + A+ ++ M C P +Y M
Sbjct: 155 DAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLM 214
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
L +A ++ EM+ RG+ PN YTVL+ L AGK +EA+++ M++ G
Sbjct: 215 DGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL 274
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLAL-------------RYPVFKEALQT 250
PD+ N + CK G L +++ AL + F E
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGY 334
Query: 251 FKVADEN----DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID----QGLVLILLK 302
+K E D +L+ + + E DA+ F+ + D ++ +L
Sbjct: 335 YKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCD 394
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
+L +L S ++ ++ LDS + +I C D A+ F+ + +
Sbjct: 395 HGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMT 454
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHS---LGVYLGA----------LLIHRLGSAR 409
Y ALI + + + +M + L + LGA L+H + +
Sbjct: 455 YNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSG 514
Query: 410 RPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ + A K+ ++P+ TY LI A + D A++++K + KGI P
Sbjct: 515 QVLKAYKLLRSIIDSGVVPD----VVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDE 570
Query: 464 GTFNVLLAGLEKLGRVSDA 482
T+ L+ GL + R +DA
Sbjct: 571 ITYGTLIDGLLRAHRENDA 589
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 187/455 (41%), Gaps = 65/455 (14%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G +R TY ++D + +F+ M ++GI + YT ++ L NAG +D A
Sbjct: 202 GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEA 261
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V + MK K C P V+Y A++ L RV EA + G Y+ L++
Sbjct: 262 VQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDG 321
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
L +A +++E + M E + PD I+I C +AG + L MK+
Sbjct: 322 LFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPD 381
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ L+ + D D L + H E + +N ++ T I ++ L
Sbjct: 382 TFCYNTVLKV--LCDHGD--LERAH-TLRSEMLQNNLVLDSTTQTI---------MICGL 427
Query: 301 LKKKNLVAIDSLLSGIMDKSIQL-----DSAVISTIIEVNC--DHRRRDGAL----LAFE 349
K+ G++D+++Q+ + T++ N D R+G L + F
Sbjct: 428 CKR-----------GLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFH 476
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY--------LGAL- 400
KM++ + +L L ++ + ++V +M ++G L Y G +
Sbjct: 477 ---KMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVP 533
Query: 401 -------LIHRLGSARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAGSADKA 447
LI+ L AR A ++F L P++ TY LI A + A
Sbjct: 534 DVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDE----ITYGTLIDGLLRAHRENDA 589
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ +++ + + G PSL +N ++ L ++ ++S A
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D TY T++D A R + +F+ + + G + Y S+M L +
Sbjct: 564 KGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQ 623
Query: 120 AVNIW-EEMKLKECYP--TIVSYTAYMKIL--FLNDRVKEATDVYKEMIQRGLPPNCYTY 174
A+N+W + + K +P + V A+ +I L+D V+E + +E P Y
Sbjct: 624 AINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNP----Y 679
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
T+ + L + + ++AL IF +QE G+ A C +LI C + I+ Y
Sbjct: 680 TIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALS 739
Query: 235 NRLALRYPVFKEALQTFKVA---DENDSLLWQVH 265
+ L PV L+ + + +L W++H
Sbjct: 740 KSIILSQPVGNRLLRWLCICYRRQDAQALAWRMH 773
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
+ G+ D VTY ++++ L A ++DGAV +++E++LK P ++Y + L R
Sbjct: 528 DSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHREN 587
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+A +++ ++Q G P+ Y +M L R K +A+ ++
Sbjct: 588 DAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINI--------------DAVTYTSVMHWLS 112
TY ++D F R+ + +F M E G N D+ + ++H +
Sbjct: 453 MTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMC 511
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
+G V A + + P +V+Y + L + A ++KE+ +G+ P+
Sbjct: 512 QSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEI 571
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILRY 231
TY L++ L+RA + +A+ +F + ++G P + N ++ C+ + ++ I L L Y
Sbjct: 572 TYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDY 631
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSL 260
+ + +PV E L E+ SL
Sbjct: 632 LPKK---YNFPVESEVLANAHKEIEDGSL 657
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 4/214 (1%)
Query: 27 LPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
L I+ DS T ++ +++A FN ++ R + T+T ++D+ + +S
Sbjct: 150 LGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA-GRDAMPNTVTFTILVDVLCKKGMVS 208
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ VFE M EKG+ + TY ++M+ +++ A ++E M K C P++ SY+ +
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILI 268
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+ R+ EA + +M ++ L PN TY LM+ L A EA E+F KM +G+
Sbjct: 269 NGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGML 328
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
P+ +IL++ CK G + +L M+E +L
Sbjct: 329 PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL 362
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 86/162 (53%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +TY +++ + ++ VFE+M KG +Y+ +++ + +D
Sbjct: 220 KGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDE 279
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +M KE P V+Y M+ L + EA +++K+M G+ PN TY++L++
Sbjct: 280 AKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLD 339
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
L + G EEAL++ + MQE ++PD NILI+ AG+
Sbjct: 340 GLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGK 381
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G H+ +T +++ I V M + GI D+VT+T++++ L N G + A
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V ++ EM ++ P V++T + +L V EA V++ M ++G+ PN YTY LM
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ +A ++F M G P + +ILI CK+ +L M E L
Sbjct: 236 YCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL 292
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 157/414 (37%), Gaps = 56/414 (13%)
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
SN +D A+ + M P+ V ++ + + + +M G+ N
Sbjct: 62 SNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHND 121
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
YT +L+ L R A+ + SKM + G+QPD LI C G
Sbjct: 122 YTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGR---------- 171
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
KEA++ F D++ P ++ V+ + +G +S
Sbjct: 172 ------------IKEAVELFNEMAGRDAM---------PNTVTFTILVDVLCK--KGMVS 208
Query: 292 IDQGLVLILLKK---KNLVAIDSLLSG----------------IMDKSIQLDSAVISTII 332
+ + + +K N+ ++L++G ++ K S +I
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILI 268
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C RR D A + +L Y L+ L ++ + E+ ++M +G
Sbjct: 269 NGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGML 328
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKI 450
+ ++L+ L A K+ + + E + Y LI F AG + A ++
Sbjct: 329 PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKEL 388
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQADALSKDAV 502
+ + GI PS+ T+N+++ GL K G +A +++RK E D+ S + +
Sbjct: 389 FSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVI 442
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 203/476 (42%), Gaps = 56/476 (11%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + DR T +L+ R+ F + +G + + VTY +++ L +
Sbjct: 96 RLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRI 155
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI------QRGLPPNC 171
A ++ M+ C P +V+Y +K L + A +++EM+ + PN
Sbjct: 156 SEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNV 215
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQ----------EAGVQPDKAACNILIEKCCKAGE 221
TY ++++ L + G+ +EA ++F +M+ + G+QPD N+LI+ CK G+
Sbjct: 216 ITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGK 275
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSL-LWQVHPQ--FSPEFISDND 277
+L M E+ + + ++ F V D N + L+ P P+ IS N
Sbjct: 276 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 335
Query: 278 AVEFV--TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI-----MDKSIQLDSAVIST 330
+ T +E + + ++L+ K+ N++ DSLL GI +D + +L S + +
Sbjct: 336 LINGYSKTLKVEEAMKLYNEMLLVG-KRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 394
Query: 331 IIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
I N ++ Y + +D L K + + ++ E+ +
Sbjct: 395 GIAEN-----------SYTYGIFLD-------------GLCKNDCLFEAMKLFTELKSSN 430
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKAL 448
L + LI L A + A ++F L + + TYT +I + G DKA
Sbjct: 431 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 490
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
+ + M G P + T+N L+ G + ++ + ++R +K + DA++ V
Sbjct: 491 VLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 546
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 116/264 (43%), Gaps = 39/264 (14%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY ++++ F ++S + +F M KG D ++Y +++ S V+ A
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 349
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV---- 176
+ ++ EM L P +++Y + +K +FL +V +A ++ M G+ N YTY +
Sbjct: 350 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 409
Query: 177 -------------------------------LMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L++ L +AGK E A E+F K+ G +P+
Sbjct: 410 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 469
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVH 265
I+I C+ G+ ++++ M+ N + ++ F +++ + ++ +H
Sbjct: 470 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 529
Query: 266 ----PQFSPEFISDNDAVEFVTTD 285
SP+ I+ + V+ ++ D
Sbjct: 530 RMAQKDVSPDAITCSIVVDMLSKD 553
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 72/139 (51%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S F + ++D +A ++ + +FE + +G + VTYT ++H G V
Sbjct: 427 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQV 486
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + ++M+ C P I++Y M+ + +++++E + M Q+ + P+ T +++
Sbjct: 487 DKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIV 546
Query: 178 MEYLVRAGKYEEALEIFSK 196
++ L + KY+E L + +
Sbjct: 547 VDMLSKDEKYQECLHLLPR 565
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSR-GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ 93
+N LK H M N +SR + TY ++D + R K +FE M+
Sbjct: 189 NINIALKLHQEM------LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMK 242
Query: 94 ----------EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
++G+ D VT+ ++ L G V A + M P +V+Y + +
Sbjct: 243 TQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLI 302
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
+ + + A +++ M +G P+ +Y VL+ + K EEA++++++M G +
Sbjct: 303 EGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKR 362
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL 248
P+ + L++ AG+ + MK + +A Y +F + L
Sbjct: 363 PNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 410
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 115/241 (47%), Gaps = 7/241 (2%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVL---KTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
W+SA+ LLK + +K SY +++L + +KA+ + S G DR Y
Sbjct: 343 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHAS-GVRPDRHFYN 401
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
M+D FG+ + F+ M+E+GI D VT+ +++ G D A+ +++EM+
Sbjct: 402 VMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRES 461
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
C +Y + +L R + + EM ++GL PN TYT L++ R+G+++EA
Sbjct: 462 NCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEA 521
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
++ M+ G++P + L+ + G + +++ M+ + L V +
Sbjct: 522 VDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINA 581
Query: 251 F 251
F
Sbjct: 582 F 582
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G + TYTT++D++G + R E M+ G+ Y ++++ + G
Sbjct: 494 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+N+ + M+ + V + + + R+ EA V + M + GL P+ TYT L
Sbjct: 554 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTL 613
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M+ L+R ++E+ I+ +M +G PD+ A +L LRYMK R+
Sbjct: 614 MKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSA-------------LRYMKHMRV 660
Query: 238 A 238
A
Sbjct: 661 A 661
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 162/398 (40%), Gaps = 29/398 (7%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E + DA ++ ++ + A D A+ + + P + TA + L RV
Sbjct: 214 ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 273
Query: 154 EATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EA ++ E G + P Y L++ V+ G + A ++ +M + GV PD+A ++L
Sbjct: 274 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLL 333
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ----VHPQF 268
++ +AG + ++L+ M+ + + VF L F+ E WQ V +
Sbjct: 334 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGE-----WQKAFAVLREM 388
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSA 326
+ + V D G K N + A+D+ + ++ I+ D
Sbjct: 389 HASGVRPDRHFYNVMIDTFG--------------KYNCLGHAMDA-FDRMREEGIEPDVV 433
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+T+I+ +C R D A+ F+ + + L T Y +I +L + + V ++ EM
Sbjct: 434 TWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEM 493
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSA 444
+ G + L+ G + R A + D + Y AL+ Y G A
Sbjct: 494 KEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQRGLA 553
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D AL + K M G+ S N L+ + R+++A
Sbjct: 554 DHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEA 591
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 132/331 (39%), Gaps = 16/331 (4%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY+ ++D + A R S + + + M+ G+ + ++ ++ + G+ A
Sbjct: 322 GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKA 381
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM P Y + + + A D + M + G+ P+ T+ L++
Sbjct: 382 FAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDA 441
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ G+++ A+E+F +M+E+ NI+I + + +L MKE L
Sbjct: 442 HCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPN 501
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP-LSIDQGLVLI 299
+ + + S F D +E + D P ++ LV
Sbjct: 502 IITYTTLVDVYGR---------------SGRFKEAVDCIEAMKADGLKPSPTMYHALVNA 546
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
++ +++ + ++ + V++++I + RR A ++ + L +
Sbjct: 547 YAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPD 606
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
Y L+ LI++ F KV I EEM +G
Sbjct: 607 VITYTTLMKALIRVEQFEKVPVIYEEMITSG 637
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 161/417 (38%), Gaps = 24/417 (5%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
++ ++ F A+ + + Q G+ + T+++ L +A V A ++ E
Sbjct: 224 FSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFF 283
Query: 129 LK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
L E P +Y A +K +K A V EM Q G+ P+ TY++L++ RAG++
Sbjct: 284 LAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRW 343
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL-------- 239
E A + +M+ GV+P + ++ GE + +LR M + +
Sbjct: 344 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVM 403
Query: 240 -----RYPVFKEALQTFKVADEN----DSLLWQVHPQFSPEFISDNDAVEFVTTDIEG-- 288
+Y A+ F E D + W + + A+E E
Sbjct: 404 IDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNC 463
Query: 289 PLSIDQGLVLI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
PL ++I L +++ ++++L+ + ++ + + +T+++V R A+
Sbjct: 464 PLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVD 523
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
E L T Y AL+ + +V+ M G + LI+ G
Sbjct: 524 CIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 583
Query: 407 SARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
RR A + + E+ + TYT L+ +K IY+ M G P
Sbjct: 584 EDRRIAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAP 640
>gi|302769109|ref|XP_002967974.1| hypothetical protein SELMODRAFT_88078 [Selaginella moellendorffii]
gi|300164712|gb|EFJ31321.1| hypothetical protein SELMODRAFT_88078 [Selaginella moellendorffii]
Length = 376
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 24/326 (7%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY ++D F + S V ++M E+G A+ Y ++ L AG V+ A +
Sbjct: 65 FTYGRLVDGFLRLSKFSEALAVLDVMAERGCIPPAIVYNQLIDGLCKAGKVEEAFELSTT 124
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M C PT+ +Y + + L L + EA D +EM G P+ TYTVL+ L R G
Sbjct: 125 MVKNGCSPTLYTYNSLINGLCLQGKTDEARDFLQEMADSGYNPDVVTYTVLINSLRRDGN 184
Query: 187 YEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
++ A+++F +M + G PD+A+ L+ CK G + L+ +++++R L F
Sbjct: 185 FKAAVDVFDEMVSKGGCVPDRASYMPLLIGLCKEG---CVQLVQEFLEKHRARLDLGSFF 241
Query: 246 EAL--QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
L TF + D SPE + N F++ + L + V L+K
Sbjct: 242 HNLLISTFSKHGKLDDARKVFRELASPELVHFN---SFMSALCQRKLISEAFQVYEQLQK 298
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
K LV D+ + +I CD R D AL + ++ + + Y
Sbjct: 299 KGLVP---------------DTYTYTILIGGLCDVGRTDQALSLKDTMIQNNCKPDSVTY 343
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKA 389
L L+K ++ +M A
Sbjct: 344 GILRAGLLKAGRRADAEQLKAQMPAA 369
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 9/170 (5%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY--TSVMHW 110
F+ + G DR +Y +L G K ++ V E +++ +D ++ ++
Sbjct: 192 FDEMVSKGGCVPDRASYMPLL--IGLCKE-GCVQLVQEFLEKHRARLDLGSFFHNLLIST 248
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
S G +D A ++ E+ P +V + ++M L + EA VY+++ ++GL P+
Sbjct: 249 FSKHGKLDDARKVFRELA----SPELVHFNSFMSALCQRKLISEAFQVYEQLQKKGLVPD 304
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
YTYT+L+ L G+ ++AL + M + +PD IL KAG
Sbjct: 305 TYTYTILIGGLCDVGRTDQALSLKDTMIQNNCKPDSVTYGILRAGLLKAG 354
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 144/385 (37%), Gaps = 47/385 (12%)
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
+S A D DG +W +K + Y + +L +++A +V +M++
Sbjct: 11 VSKAAD-DGTWTVWSLLKKES------DYNMTIDLLCREGLLEQACNVLDKMLEGKYEAT 63
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
+TY L++ +R K+ EAL + M E G P N LI+ CKAG+ +
Sbjct: 64 TFTYGRLVDGFLRLSKFSEALAVLDVMAERGCIPPAIVYNQLIDGLCKAGKVEEAFELST 123
Query: 231 YMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
M +N + + + K + D L ++P+ ++ + + D
Sbjct: 124 TMVKNGCSPTLYTYNSLINGLCLQGKTDEARDFLQEMADSGYNPDVVTYTVLINSLRRDG 183
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDS-----LLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
++D V + K D LL G+ + + + E HR R
Sbjct: 184 NFKAAVD---VFDEMVSKGGCVPDRASYMPLLIGLCKE------GCVQLVQEFLEKHRAR 234
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH-SLGVYLGAL 400
L+L + LI K ++ E+ ++ AL
Sbjct: 235 --------------LDLGSFFHNLLISTFSKHGKLDDARKVFRELASPELVHFNSFMSAL 280
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCTATY--TALIGVYFSAGSADKALKIYKTMCRKG 458
+L S A +++ L + TY T LIG G D+AL + TM +
Sbjct: 281 CQRKLIS-----EAFQVYEQLQKKGLVPDTYTYTILIGGLCDVGRTDQALSLKDTMIQNN 335
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAE 483
P T+ +L AGL K GR +DAE
Sbjct: 336 CKPDSVTYGILRAGLLKAGRRADAE 360
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 65/164 (39%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +D+ + V + M E TY ++ A+ + + M
Sbjct: 32 YNMTIDLLCREGLLEQACNVLDKMLEGKYEATTFTYGRLVDGFLRLSKFSEALAVLDVMA 91
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ C P + Y + L +V+EA ++ M++ G P YTY L+ L GK +
Sbjct: 92 ERGCIPPAIVYNQLIDGLCKAGKVEEAFELSTTMVKNGCSPTLYTYNSLINGLCLQGKTD 151
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
EA + +M ++G PD +LI + G + + + M
Sbjct: 152 EARDFLQEMADSGYNPDVVTYTVLINSLRRDGNFKAAVDVFDEM 195
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 8/264 (3%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V RG Y ++D +A ++ + M + G + TY S+++ L G
Sbjct: 89 VMAERGCIPPAIVYNQLIDGLCKAGKVEEAFELSTTMVKNGCSPTLYTYNSLINGLCLQG 148
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR-GLPPNCYTY 174
D A + +EM P +V+YT + L + K A DV+ EM+ + G P+ +Y
Sbjct: 149 KTDEARDFLQEMADSGYNPDVVTYTVLINSLRRDGNFKAAVDVFDEMVSKGGCVPDRASY 208
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ L + G + E K A + N+LI K G+ + R +
Sbjct: 209 MPLLIGLCKEGCVQLVQEFLEK-HRARLDLGSFFHNLLISTFSKHGKLDDARKVFRELAS 267
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE-FISDNDAVEFVTTDIEGPLSID 293
L + + F AL K+ E +QV+ Q + + D + + D
Sbjct: 268 PEL-VHFNSFMSALCQRKLISE----AFQVYEQLQKKGLVPDTYTYTILIGGLCDVGRTD 322
Query: 294 QGLVLILLKKKNLVAIDSLLSGIM 317
Q L L +N DS+ GI+
Sbjct: 323 QALSLKDTMIQNNCKPDSVTYGIL 346
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 5/248 (2%)
Query: 20 AQDLLKNLPIKWDSYTVNQVL-----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
A LL LP D+ + N VL + H A L + + +YT ++
Sbjct: 64 ATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMR 123
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+R + M+ G+ D VTY +++ L +A +VD AV + EM P
Sbjct: 124 ALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 183
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+V Y++ ++ + R ++ V+ EM ++G+ P+ YT L++ L + GK ++A +
Sbjct: 184 NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 243
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
M G++P+ N+LI CK G + I +L+ M E +A + ++
Sbjct: 244 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 303
Query: 255 DENDSLLW 262
E D +W
Sbjct: 304 LEMDEAMW 311
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + Y+++L + ++ R + VF M EKGI D V YT ++ L G A
Sbjct: 180 GIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKA 239
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + M + P +V+Y + + VKEA V K+M ++G+ P+ TY L++
Sbjct: 240 HGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKG 299
Query: 181 LVRAGKYEEALEIFSKM 197
L + +EA+ + +M
Sbjct: 300 LSDVLEMDEAMWLLEEM 316
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D YT ++D + + V ++M +G+ + VTY +++ + G V
Sbjct: 214 KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKE 273
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
A+ + ++M K P +V+Y +K L + EA + +EM++
Sbjct: 274 AIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 2/165 (1%)
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
LL + ++ D T+I CD D A+ + + Y +L+
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCT 428
K + V ++ EM++ G V + LI L + A + ++ +
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
TY LI GS +A+ + K M KG+ P + T+N L+ GL
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G D TY TM+ + +++F + E+G+ + +TY +++H L G
Sbjct: 445 KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRW 504
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ + EM L C ++SY +K L V + + +EM+ +G+ PN ++Y +L
Sbjct: 505 QEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNML 564
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ L +AGK +ALE+ +M G+ PD N LI CK G T + +L
Sbjct: 565 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 616
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY+T+L F + + + M KG ++++ Y +++ L G +D
Sbjct: 377 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQ 436
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +EMK + C P I +Y + L ND ++EA +++ +I+ G+ N TY L+
Sbjct: 437 ATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIH 496
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L+R G+++E L + S+M G Q D + N LI+ CK G + +L M
Sbjct: 497 ALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM 549
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 163/446 (36%), Gaps = 51/446 (11%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FT+ R + M G DAV Y +V+H L G V A + +E
Sbjct: 178 FTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDE 237
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA-- 184
M L C + ++ + L RV+EA + M+ +G P+ TY L++ L R
Sbjct: 238 MLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQ 297
Query: 185 -----------------------------GKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
GK A E++ M G PD +IL+
Sbjct: 298 ADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHG 357
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
CK G + + +L M+E A + L +F D + + F +
Sbjct: 358 LCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMN 417
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ G++ L K L L+ + + + D +T+I
Sbjct: 418 SQGY--------------NGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHL 463
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C++ + A F ++ + Y LI L++ + + + EM G L V
Sbjct: 464 CNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDV 523
Query: 396 YLGALLIHRL---GSARRPVPAAKIFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIY 451
LI L G+ R + A + ++ + K +Y LI AG AL++
Sbjct: 524 ISYNGLIKALCKEGNVDRSM--ALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELS 581
Query: 452 KTMCRKGIHPSLGTFNVLLAGLEKLG 477
K M +G+ P + T+N L+ GL K+G
Sbjct: 582 KEMLNQGLTPDIVTYNTLINGLCKVG 607
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 146/408 (35%), Gaps = 54/408 (13%)
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
++ V +V+ G + A ++E M K C P + +Y+ M L R A +
Sbjct: 311 VNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRM 370
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
EM ++G PN TY+ L+ R G +++A + +M G + N +I CK
Sbjct: 371 LDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCK 430
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
G+ +++ MK + + N+ L+ + F I +
Sbjct: 431 DGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLC----NNDLMEEAEHIFR-NLIEEGVV 485
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+T + L+ LL+ L S ++ QLD + +I+ C
Sbjct: 486 ANGITYNT---------LIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKE 536
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
D ++ E V + +Y LI L K E+ +EM G
Sbjct: 537 GNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG-------- 588
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
L P+ TY LI G AL + + + +
Sbjct: 589 ---------------------LTPD----IVTYNTLINGLCKVGWTHAALNLLEKLPNEN 623
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEE 506
+HP + T+N+L++ K+ + DA + + A+S VP E
Sbjct: 624 VHPDIVTYNILISWHCKVRLLDDAAMLLDK-------AISGGIVPNER 664
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/458 (18%), Positives = 151/458 (32%), Gaps = 55/458 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +L A + ++ M + T+ L G A+ + M
Sbjct: 144 SYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGM 203
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C P V Y + L V EA + EM+ G + T+ L+ L G+
Sbjct: 204 ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRV 263
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA + +M G P L++ C+ + +L + E + + V +
Sbjct: 264 REAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGC 323
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
L K+A + P+ V + + G L K
Sbjct: 324 LTEGKLARATELYEMMGSKGCPPD-------VHTYSILMHG-----------LCKLGRFG 365
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
+ +L + +K + ST++ C + D A + + ++ Y +I
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII 425
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--- 424
L K + +V+EM G + +I+ L + A IF L E+
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485
Query: 425 ----------------------------------QKCTATYTALIGVYFSAGSADKALKI 450
Q +Y LI G+ D+++ +
Sbjct: 486 ANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMAL 545
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+ M KGI P+ ++N+L+ L K G+V DA KE
Sbjct: 546 LEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 583
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G + F+Y +++ +A ++ + + M +G+ D VTY ++++ L G
Sbjct: 551 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 610
Query: 119 GAVNIWEEMKLKECYPTIVSYTA----YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
A+N+ E++ + +P IV+Y + K+ L+D A + + I G+ PN T+
Sbjct: 611 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDD----AAMLLDKAISGGIVPNERTW 666
Query: 175 TVLMEYLVR 183
++++ VR
Sbjct: 667 GMMVQNFVR 675
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 44/250 (17%)
Query: 8 VYKILKYSTWDSAQDL---LKNLPIKWDSYTVNQV---LKTHPPMEKA-WLFFNWVSRSR 60
+Y + K D A L +K+ K D T N + L + ME+A +F N +
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE-- 482
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + TY T++ R + M G +D ++Y ++ L G+VD +
Sbjct: 483 GVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRS 542
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN---------- 170
+ + EEM K P SY + L +V++A ++ KEM+ +GL P+
Sbjct: 543 MALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 602
Query: 171 -C------------------------YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
C TY +L+ + + ++A + K G+ P+
Sbjct: 603 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPN 662
Query: 206 KAACNILIEK 215
+ ++++
Sbjct: 663 ERTWGMMVQN 672
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P+ SY + L D +A +Y+ M++ +PP +T+ V L R G+ +AL +
Sbjct: 140 PSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALAL 199
Query: 194 FSKMQEAGVQPD 205
M G PD
Sbjct: 200 LRGMARHGCVPD 211
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 13 KYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRF 67
K W++A DLLK +P + D T + V+ + F + ++G +
Sbjct: 268 KGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANII 327
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY+ ++ + + + MQE G+ D +TY+S + + G + AV + EM
Sbjct: 328 TYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREM 387
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
++ P +SY + R +EA D+ +EM G+PP+ Y+ ++ +A ++
Sbjct: 388 PMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRW 447
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVF 244
E+AL + +M G+ P+ + N I+ C K G ++ + +LR M + LA + Y
Sbjct: 448 EQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAV 507
Query: 245 KEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAV 279
+ + +E L ++ Q +P+ +S N A+
Sbjct: 508 IASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAI 543
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D Y+ +D +A R ++ M G+ + ++Y S + + G
Sbjct: 423 QAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRS 482
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV + EM P +++Y+A + + + +EA D+++EM ++G+ P+ +
Sbjct: 483 KIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTA 542
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ + G +EEAL++ +M G+ PD + I+ C K + II +LR M
Sbjct: 543 INACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREM 597
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 162/425 (38%), Gaps = 57/425 (13%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D Y++ + G A++ + M +G D +TY+S + +
Sbjct: 178 QEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRW 237
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV + MK + P ++ Y+A + + + A D+ KEM GL P+ TY+ +
Sbjct: 238 KEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTV 297
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ + G++E A + +M GV + +I+I C K G+ + +LR M+EN +
Sbjct: 298 IDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGV 357
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
A + Y A +E LL ++ +E VT P +I
Sbjct: 358 APDVITYSSTISACAKKGQWEEAVGLLREM-------------PMEGVT-----PNAISY 399
Query: 295 GLVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
G+V+ K+ AID LL + + D S I+ R + AL
Sbjct: 400 GIVISACAKRGRWREAID-LLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMP 458
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
L +Y + I K E++ EM G
Sbjct: 459 ATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHG---------------------- 496
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
L P+ TY+A+I ++AL +++ M R+GI P + + N +
Sbjct: 497 -------LAPD----VITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINA 545
Query: 473 LEKLG 477
+ G
Sbjct: 546 CAQGG 550
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D TY+ ++ ++ +F MQ +GI D V+ + ++ + G +
Sbjct: 494 AHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWE 553
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+++ EM P +SY + DR KE D+ +EM GL P+ +Y M
Sbjct: 554 EALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAM 613
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
G ++EAL + M G+ PD N I C K G + ++LR M LA
Sbjct: 614 SACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLA 673
Query: 239 LRYPVFKEALQTFKVADE 256
F A+ D+
Sbjct: 674 PDVNSFNAAIDACGNGDQ 691
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +Y T +D + R + + M G+ DA++Y M +A VDG
Sbjct: 566 GLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAM----SACSVDG- 620
Query: 121 VNIWEE-------MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+W+E M P +V+Y + + R KEAT + ++M GL P+ +
Sbjct: 621 --LWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNS 678
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ ++ ++ A+E+ +M+ GV P++A + C + GE
Sbjct: 679 FNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGE 726
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++A DV M ++G+ P+ Y+ + A ++E A+E+ + M G PD +
Sbjct: 168 RKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSA 227
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
I C K + + +LR MK + V+ A+ +
Sbjct: 228 IAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACR 267
>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 376
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ +G D F Y+ M++ + + V M + G +A Y ++++ L A
Sbjct: 119 MAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGAS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A+ ++ EM C PTI++Y + L N+ EA D+ KEM+++GL P+ TY+
Sbjct: 179 KFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L K E AL++++++ G +PD NILI C G+T+ + + M
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRW 298
Query: 236 RLALRYPVFKEALQTF-KVADENDSL-LWQ--VHPQFSPEFISDN 276
+ A ++ F K D ++L +W + P+ IS N
Sbjct: 299 KCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYN 343
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W N ++ M+ + ++ + ++ELM++ D++TY ++H
Sbjct: 48 WEMMGNEGNRSVSSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKN 107
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G ++ ++++ E + K +Y+A + L + +A V +MI+ G PN + Y
Sbjct: 108 GYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVY 167
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
L+ LV A K+E+A+ +F +M P N LI CK
Sbjct: 168 NTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGLCK 211
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S +N + K ++KA N + +S G + Y T+++ A + VF M
Sbjct: 133 SAMINGLCK-EANLDKAVSVLNDMIKS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREM 190
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ +TY ++++ L A ++ +EM K P++++Y+ MK L L+ +V
Sbjct: 191 GTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKV 250
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+ A ++ ++I +G P+ + +L+ L GK + AL ++ M P+ N L
Sbjct: 251 ERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTL 310
Query: 213 IEKCCKAGETRTIILILRYMKENRL 237
+E K G+ R ++I + N L
Sbjct: 311 MEGFYKDGDIRNALVIWARVLRNGL 335
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 163/428 (38%), Gaps = 96/428 (22%)
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+GD+DGA +++E+ + P V Y A + F ++K+ ++++ M G + +
Sbjct: 3 SGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGNEG-NRSVSS 61
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ ++M L GK +E + I+ M+++ D IL+ CK G
Sbjct: 62 FNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNG------------- 108
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
++L ++A++ +L DA +
Sbjct: 109 ---------YINKSLHVLEMAEQKGGVL---------------DAFAY------------ 132
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
++ L K+ NL S+L+ ++ + ++ V +T+I + + A+ F
Sbjct: 133 SAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGT 192
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG------------------HSL-- 393
+ + Y LI L K F + ++V+EM + G H +
Sbjct: 193 VRCSPTIITYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGLCLDHKVER 252
Query: 394 ---------------GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALI 435
V + +LIH L S + A ++ J KC T+ L+
Sbjct: 253 ALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLY-JDMNRWKCAPNLVTHNTLM 311
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
++ G AL I+ + R G+ P + ++N+ L GL R+ DA ++ D
Sbjct: 312 EGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLH-------D 364
Query: 496 ALSKDAVP 503
A+ K VP
Sbjct: 365 AVRKKIVP 372
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 67 FTYTTMLD------IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
TY T+++ +FGEA + + M EKG+N +TY+ +M L V+ A
Sbjct: 200 ITYNTLINGLCKNEMFGEAYDL------VKEMLEKGLNPSVITYSMLMKGLCLDHKVERA 253
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ +W ++ K P + + + L + + A +Y +M + PN T+ LME
Sbjct: 254 LQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJDMNRWKCAPNLVTHNTLMEG 313
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
+ G AL I++++ G++PD + NI ++ C IL L
Sbjct: 314 FYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLH 363
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/147 (17%), Positives = 66/147 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N TY+ ++ ++ ++ + KG D + ++H L + G
Sbjct: 228 KGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQL 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ +M +C P +V++ M+ + + ++ A ++ +++ GL P+ +Y + ++
Sbjct: 288 ALSLYJDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLK 347
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDK 206
L + +A+ + P K
Sbjct: 348 GLCSCNRICDAILFLHDAVRKKIVPTK 374
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 1/155 (0%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V++ + E ++ DAV Y ++++ + +WE M E ++
Sbjct: 2 ESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMG-NEGNRSVS 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF +V E +++ M + + TY +L+ + G ++L +
Sbjct: 61 SFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITYGILVHGFCKNGYINKSLHVLEMA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
++ G D A + +I CK + +L M
Sbjct: 121 EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDM 155
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Query: 21 QDLLKNLPIKWDSYTVNQVLK-----THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDI 75
Q +++ + D YT+N + P K WL +G + +YTT++DI
Sbjct: 129 QVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLL---TMIEKGVVPNVVSYTTLIDI 185
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ + K +F+ M++ G +AVTY ++ S G + A + +EM+ K +P
Sbjct: 186 YCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPD 245
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
I +YT+ + + ++ +A +++ E+ Q+GLP N TYT ++ L + G+ EEA +++
Sbjct: 246 IYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYD 305
Query: 196 KMQEAGVQPDKAACNILIEKCCKA 219
+M EAG+ PD L+ KA
Sbjct: 306 EMTEAGLTPDDRVYTSLVSSLHKA 329
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ +GF +D +T T+ D + + K M EKG+ + V+YT+++ G
Sbjct: 131 IMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEG 190
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A +++EMK P V+Y + R+KEA ++ EM +G+ P+ YTYT
Sbjct: 191 NFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYT 250
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L+ GK ++A+E+F+++++ G+ + +I K G + + M E
Sbjct: 251 SLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEA 310
Query: 236 RL 237
L
Sbjct: 311 GL 312
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A + N + ++RG + ++ Y T++D + + I V +M++KG D T
Sbjct: 87 MEAAEILVNEM-QTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLN 145
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L + A M K P +VSYT + I EA +++EM +
Sbjct: 146 TIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKA 205
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY VL++ + G+ +EA E+ +M+ G+ PD L+ C G+
Sbjct: 206 GGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDA 265
Query: 226 ILILRYMKENRLAL 239
+ + +++ L L
Sbjct: 266 VELFNEVRQKGLPL 279
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D G + +I ++ +FE M EKGI D YT V++W G+ A +++E+
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + +Y A + + ++ A + EM RGL N Y L++ + G
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 188 EEALEIFSKMQEAGVQPDKAACNIL 212
+EA ++ M++ G + D N +
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTI 147
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 136/342 (39%), Gaps = 16/342 (4%)
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ +YT + + ++ E +++EM ++G+ + + YTV++ + + G + A +F
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
++ E G+ + LI+ CKAGE +++ M+ L + ++ + +
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGY---- 116
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
+ F + I + E DI +I G L K L
Sbjct: 117 ---CKRGLIDEAFKVQVIMEKKGFE---NDIYTLNTIADG----LRKLNQPEEAKRWLLT 166
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+++K + + +T+I++ C A F+ K Y LI K
Sbjct: 167 MIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGR 226
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTA 433
+ E+ +EM G +Y L+H + A ++F+ + + TYTA
Sbjct: 227 MKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTA 286
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+I G +++A K+Y M G+ P + L++ L K
Sbjct: 287 IISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHK 328
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 134/325 (41%), Gaps = 42/325 (12%)
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TYT+L+++ +GK +E +F +M E G++ D ++I CK G T+ + +
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG-PLS 291
E L + + A E + A E + +++ L
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEME-------------------AAEILVNEMQTRGLD 103
Query: 292 IDQGLVLILLK---KKNLVAIDSLLSGIMDK-SIQLDSAVISTIIE----VNCDHRRRDG 343
++Q + L+ K+ L+ + IM+K + D ++TI + +N +
Sbjct: 104 VNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRW 163
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
L E V ++ +Y LI I K F + ++ +EM KAG +LI
Sbjct: 164 LLTMIEKGVVPNV----VSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLID 219
Query: 404 ------RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
R+ A + + P+ TYT+L+ G D A++++ + +K
Sbjct: 220 GHSKKGRMKEAYELRDEMRAKGIFPD----IYTYTSLLHGECIFGKLDDAVELFNEVRQK 275
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA 482
G+ ++ T+ +++GL K GR +A
Sbjct: 276 GLPLNVVTYTAIISGLSKEGRSEEA 300
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK 489
+YT LI +Y G+ +A K+++ M + G P+ T+NVL+ G K GR+ +A R E
Sbjct: 178 SYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEM 237
Query: 490 KS 491
++
Sbjct: 238 RA 239
>gi|242074540|ref|XP_002447206.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
gi|241938389|gb|EES11534.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
Length = 446
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +Y+ +D ++ + VF+ M++KG+ ID V Y + +H + A VD
Sbjct: 210 RGVAKDLHSYSIYMDALAKSGKPWKTFKVFKEMKQKGVRIDTVAYNTAIHAVGLAQGVDS 269
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV ++ +M C P +Y +K+ R KE ++M + G P+ TY +
Sbjct: 270 AVRLYRQMVDAGCKPNTATYNGIVKLFCKEGRFKEGYAFVQQMHKTGCKPDVLTYHCFFQ 329
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+L R +E L +F KM E G QP +LI++ + G R + ++ + M+E L+
Sbjct: 330 FLSRP---QEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLS 385
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 84/194 (43%), Gaps = 20/194 (10%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ +L + + + + ++ ++ M +G+ D +Y+ M L+ +G +++EM
Sbjct: 183 THNLLLRGWAKTRAWARLRQLWFDMDRRGVAKDLHSYSIYMDALAKSGKPWKTFKVFKEM 242
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K V+Y + + L V A +Y++M+ G PN TY +++ + G++
Sbjct: 243 KQKGVRIDTVAYNTAIHAVGLAQGVDSAVRLYRQMVDAGCKPNTATYNGIVKLFCKEGRF 302
Query: 188 EEALEIFSKMQEAGVQPDKAACNI-----------------LIEKCCKAGETRTIILILR 230
+E +M + G +PD + ++E+ C+ ++LI R
Sbjct: 303 KEGYAFVQQMHKTGCKPDVLTYHCFFQFLSRPQEVLGLFEKMLERGCQPRMDTYVMLIKR 362
Query: 231 YMKENRLALRYPVF 244
+ R PVF
Sbjct: 363 F---GRWGFLRPVF 373
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ +F + R + M + G D +TY +LS +V G ++E+M
Sbjct: 288 TYNGIVKLFCKEGRFKEGYAFVQQMHKTGCKPDVLTYHCFFQFLSRPQEVLG---LFEKM 344
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P + +Y +K ++ V+K M ++GL P+ + Y L++ L++ G
Sbjct: 345 LERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNALIDALLQKGMV 404
Query: 188 EEALEIFSKMQEAGVQP 204
+ A + +M G+ P
Sbjct: 405 DLARKYDEEMLAKGLSP 421
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 27/231 (11%)
Query: 285 DIEGPLSIDQGLVLIL--LKKKNLV-----AIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
D E P + L +L L NLV A DS + I + D A +++ CD
Sbjct: 103 DPEDPAFLRPALRALLNRLAAANLVDDALRAFDSTAASIGLR----DEASFHLLVDALCD 158
Query: 338 HRRRDGA-LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG-----H 391
HRR D A L F +T L L G K + ++ ++ +M + G H
Sbjct: 159 HRRVDEADHLCFGKDPPPFPPGTKTHNLLLRG-WAKTRAWARLRQLWFDMDRRGVAKDLH 217
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
S +Y+ AL + +P K+F + + + T Y I A D A++
Sbjct: 218 SYSIYMDAL-----AKSGKPWKTFKVFKEMKQKGVRIDTVAYNTAIHAVGLAQGVDSAVR 272
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD--AEIYRKEKKSIQADALS 498
+Y+ M G P+ T+N ++ K GR + A + + K + D L+
Sbjct: 273 LYRQMVDAGCKPNTATYNGIVKLFCKEGRFKEGYAFVQQMHKTGCKPDVLT 323
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 172/443 (38%), Gaps = 33/443 (7%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++D + ++ V++ M++ G++ + TY ++ L V A + +EM
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K C P V+Y + +L DR+ EAT+V M PP +Y ++ L R + +
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQ 245
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
E + S M G+QP+ +++ CKAGE R IL M F +
Sbjct: 246 EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALV 305
Query: 249 QTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ +V D D W V ++P +S N L+ L
Sbjct: 306 RGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNI------------------LIRGLCSVG 347
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+L S+L+ + + ST+I+ GA+ + + Y
Sbjct: 348 DLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYT 407
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
++ + K F + ++++M LI L RR A +F +
Sbjct: 408 NMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM-RR 466
Query: 425 QKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
C TY LI F G+ AL + M GI SL T+N +++GL + +
Sbjct: 467 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 526
Query: 482 AEIYRKEK--KSIQADALSKDAV 502
A ++ + + IQ +A + A+
Sbjct: 527 AMVFVGKMIVQGIQPNAFTFSAI 549
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 169/467 (36%), Gaps = 60/467 (12%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + + FTY ++ + R+ + + + + M KG D VTY +++ L +
Sbjct: 155 RKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRL 214
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + M P SY A + L R++E V +M+ RGL PN TYT +
Sbjct: 215 DEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTI 269
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPD-------------------------------- 205
++ +AG+ A I ++M G P+
Sbjct: 270 VDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGW 329
Query: 206 ---KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSL- 260
+ NILI C G+ + IL M+++ + + F K D ++
Sbjct: 330 APSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAIS 389
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
+W + + + + + +V + KK SL+ ++ ++
Sbjct: 390 IWN----------------DMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 433
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
++ +T+I CD RR AL F + Y LI L +
Sbjct: 434 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 493
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVY 438
+V EM G L + ++ L R A ++ Q T++A+I Y
Sbjct: 494 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 553
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
G A + M H ++ + +L+A L ++ DA Y
Sbjct: 554 CKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 600
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 5/235 (2%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+N +SRS G + YT M+D+F + + K + + M + + VT+ +++ L
Sbjct: 390 IWNDMSRS-GCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 448
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+ V A+ ++ EM+ C P +Y + LF +A + EM G+ +
Sbjct: 449 CDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSL 508
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
TY ++ L + EA+ KM G+QP+ + +I CK GE R +L
Sbjct: 509 VTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGA 568
Query: 232 MKE---NRLALRYPVF-KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
M +R L Y + E K+ D LL ++ P ++ N V V
Sbjct: 569 MNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEKGINIDAVTYTSVMHWLSNAGD 116
+S G TY T++ + R+S VF M +GI +A T+++++H G+
Sbjct: 500 QSHGIELSLVTYNTVVSGLCQT-RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 558
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
V A + M + C+ I+ YT M L D++ +A +M+ G+ PN T+ V
Sbjct: 559 VRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 618
Query: 177 LMEYLVR 183
L+ + R
Sbjct: 619 LVRGVFR 625
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 202/474 (42%), Gaps = 69/474 (14%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR---ISS 84
P + V QVL + A +N + S G + TY ++D G KR + +
Sbjct: 177 PTAFVYNAVFQVLVDRGVILLALALYNRMVSS-GCLPNSTTYIVLMD--GLCKRGMAVDA 233
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+K +F+ M E+GI D YT ++ L N G ++ A + MK C P V+YT ++
Sbjct: 234 LK-MFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLS 292
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L RV EA ++ + G Y+ L++ L +AG+++E L +++M + P
Sbjct: 293 GLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISP 352
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLL 261
D ILI + +AG T+ L+L MK+ Y +AL D SL+
Sbjct: 353 DITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLM 412
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
E + +N ++ T +I ++ L KK G++DK++
Sbjct: 413 --------SEMLQNNVVLDSTTHNI---------MICGLCKK-----------GLIDKAM 444
Query: 322 QL-----DSAVISTIIEVNC--DHRRRDGAL----LAFEYSVKMDLNLERTAYLALIGIL 370
Q+ + T++ N D R G L + F KM++ + +L L
Sbjct: 445 QVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFH---KMEMGNNPSLFLRLTLGA 501
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
++ + ++V+ M ++G L Y LL + S ++P+ T
Sbjct: 502 NQVRDTESLRKLVDGMCQSGQVLKAY--KLLRGIIESG-----------VVPD----VVT 544
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
Y LI A + D AL+++K + KGI P T+ L+ GL + R +DA +
Sbjct: 545 YNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATM 598
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 180/447 (40%), Gaps = 41/447 (9%)
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+ G+ + + +++ S+AG AV + M +C PT Y A ++L +
Sbjct: 136 RAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVI 195
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
A +Y M+ G PN TY VLM+ L + G +AL++F +M E G+ PD +L
Sbjct: 196 LLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVL 255
Query: 213 IEKCCKAGETRTIILILRYMKENRLA---LRYPVF----------KEALQTFKVADENDS 259
+ C G +L MKEN + Y VF EA F++ +
Sbjct: 256 LSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGF 315
Query: 260 LLWQVHPQFSPEFISD----NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS---- 311
L + + + ++ + + T + +S D L IL+++
Sbjct: 316 TLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFL 375
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
LL + DK D+ +T+++ D D A ++ ++ L+ T + +I L
Sbjct: 376 LLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLC 435
Query: 372 KLNTFPKVAEIVEEMTKAG-HSL---------GVYLGA------LLIHRLGSARRPVPAA 415
K K ++ +EM + G H G+Y +L H++ P
Sbjct: 436 KKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFL 495
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++ +L + T + L+ +G KA K+ + + G+ P + T+N L+ GL K
Sbjct: 496 RL-TLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCK 554
Query: 476 LGRVSDAEIYRKEKKSIQADALSKDAV 502
+ A KE +Q +S D +
Sbjct: 555 AKNLDGALRLFKE---LQLKGISPDEI 578
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 12/214 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D TY T++D A R + +F+ + G Y ++M L +
Sbjct: 571 KGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQ 630
Query: 120 AVNIW-----EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
A+N+W ++ L I + + FL++ VKE + + + L PN YT
Sbjct: 631 AINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKI--DQVYGSLNPNPYTI 688
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
V+ VR K ++AL IF ++E G+ A C +LI C + I+ Y
Sbjct: 689 WVIGLCQVR--KIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVDIMMYTLS 746
Query: 235 NRLALRYPVFKEALQTFKV---ADENDSLLWQVH 265
R + PV L++ + + +L W++H
Sbjct: 747 KRFIVSQPVGNRLLRSLCIRYRRHDAQALSWRMH 780
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 58/101 (57%)
Query: 94 EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
E G+ D VTY ++++ L A ++DGA+ +++E++LK P ++Y + L+ R
Sbjct: 535 ESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHREN 594
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
+AT +++ +++ G P+ Y +M L R K +A+ ++
Sbjct: 595 DATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW 635
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 24/257 (9%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQV---LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
D AQ L+ + + DS T N + L ++KA F+ + G + TY
Sbjct: 406 DRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMG-EHGCHPTVMTYNA 464
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINI--------------DAVTYTSVMHWLSNAGDV 117
++D A + + +F M E G N D + ++ + +G V
Sbjct: 465 LIDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQV 523
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A + + P +V+Y + L + A ++KE+ +G+ P+ TY L
Sbjct: 524 LKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTL 583
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYM-KEN 235
++ L RA + +A +F + +G P N ++ C+ + ++ I L L Y+ K+
Sbjct: 584 IDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKY 643
Query: 236 RLALRYPVFKEALQTFK 252
L+ V A + F+
Sbjct: 644 NLSPEDEVIANARKCFE 660
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 187/470 (39%), Gaps = 24/470 (5%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
++NL +D V VL E A FF WV RS F H+R T+ +++I G A +++
Sbjct: 3 IRNLVPSFDQELVYNVLHGAKTSEHALQFFRWVERSNLFEHNRDTHLKIIEILGRALKLN 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M +KG+ D + ++ AG V +V ++++M+ TI SY A
Sbjct: 63 HARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALF 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K++ R A + +M+ G+ P +T+ VL+ +GK + A F M+ +
Sbjct: 123 KVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVDTANRFFEDMKSREIS 182
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD N +I C + + MK + + ++ + D+ D L
Sbjct: 183 PDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLIKGYVSVDQVDDALRL 242
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ- 322
V + I N A+ + T L+ L + S+L ++DK I
Sbjct: 243 VE-EMKGYGIKPN-AITYST------------LLPGLCDAGKMSEAQSILKEMVDKYIAP 288
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D+++ +I C+ A + +++ + E Y LI K K ++
Sbjct: 289 KDNSIFMRLISSQCEAGNLGAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKL 348
Query: 383 VEEMTKAG---------HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA 433
++++ + H ++ + + + A + LL + +
Sbjct: 349 LDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDSTALNT 408
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 409 LIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAK 458
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + I+ +M K G + L+I G A + K+F
Sbjct: 45 RDTHLKIIEILGRALKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNVL+ G G
Sbjct: 105 KMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVDTANRFFEDMKS 178
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 184/467 (39%), Gaps = 68/467 (14%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N LK MEK G + D +TY T++ + K + + + ++E
Sbjct: 339 MNDALKIKELMEK-----------NGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKE- 386
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G VT+T++++ A D A+ + +M +C + + + L DR+KEA
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
++ E+ GL PN TYT +++ ++GK + ALE+ M+ G QP+ N L+
Sbjct: 447 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 506
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
K + + +L M+++ + + LQ DE+D
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ--GQCDEHD----------------- 547
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
D L + ++N ++ D + + +
Sbjct: 548 ----------------FDNAFRLFEMMEQN--------------GLKPDEHAYAVLTDAL 577
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R A A+ + V+ + L + Y LI K A ++E M G +
Sbjct: 578 CKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLP-EDQKCTA-TYTALIGVYFSAGSADKALKIYKT 453
Y ++L+H L +R A I + KCT YT LI G D A ++Y
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
M G PS T+ V + K GR+ DAE I + E++ + D ++
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
++++ R +G + YTT++D F +A + E M ++G D+ TY+ ++H L
Sbjct: 587 YSFIVR-KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 645
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
++ A+ I ++M L+ TI +YT + + + A +Y EM G P+
Sbjct: 646 KQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSAT 705
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
TYTV + + G+ E+A ++ KM+ GV PD NILI+ C G
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 172/458 (37%), Gaps = 58/458 (12%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
P W T+ L E L N V GF T+T +++ + A++
Sbjct: 356 PDDWTYNTLIYGLCDQKTEEAEELLNNAVKE--GFTPTVVTFTNLINGYCMAEKFDDALR 413
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ M +D + +++ L + A + E+ P +++YT+ +
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ +V A +V K M + G PN +TY LM LV+ K +A+ + +KMQ+ G+ P+
Sbjct: 474 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQV 264
L++ C + + M++N L Y V +AL A+E S + +
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 593
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+ + TT I+G K N +L+ ++D+ D
Sbjct: 594 GVALTK---------VYYTTLIDG-----------FSKAGNTDFAATLIERMIDEGCTPD 633
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S S ++ C +R + AL + + AY LI +++ +
Sbjct: 634 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 693
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSA 444
EMT +GH P+A TYT I Y G
Sbjct: 694 EMTSSGHK--------------------PSA-------------TTYTVFINSYCKEGRL 720
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ A + M R+G+ P + T+N+L+ G +G + A
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/510 (20%), Positives = 193/510 (37%), Gaps = 62/510 (12%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVN--QVLKTHPPMEKAWLFFNWVSRSR 60
D ++ + +IL W+ + + P ++ + + T P A FF W++R
Sbjct: 25 DVVAELGRILSTRRWNKGRAYKRLAPSVTAAHVADLFRADSTAPEPATALAFFEWLARRD 84
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKY---VFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
GF H ++ +L + ++R + +Y V ++ D + + G
Sbjct: 85 GFRHTADSHAALLHLL--SRRRAPAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSA 142
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A++ +CY + A D + VY +++Q GL P+ TY +
Sbjct: 143 RLALS-------PKCYNFALRSLARF------DMTEYMGRVYSQLVQDGLLPDTVTYNTM 189
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT---IILILRYMKE 234
++ + G A F + E G++P+ CN L+ C+ GE R + L++ M
Sbjct: 190 IKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGC 249
Query: 235 NRLALRYPVFKEALQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
R Y + + L K + L L SP A F+ + + +
Sbjct: 250 QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNV----RAFTFLISGLCKSGRVG 305
Query: 294 QGLVLILLKKKNLVAIDSLLS-----------GIMDKSIQL-----------DSAVISTI 331
+L +N V + S+++ G M+ ++++ D +T+
Sbjct: 306 DARLLFDAMPQNGV-VPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I CD + + L +VK + LI F + +M +
Sbjct: 365 IYGLCDQKTEEAEEL-LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423
Query: 392 SLGVYLGALLIH------RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
L + + LI+ RL A+ + L+P TYT++I Y +G D
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN----VITYTSIIDGYCKSGKVD 479
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
AL++ K M R G P+ T+N L+ GL K
Sbjct: 480 IALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 181/476 (38%), Gaps = 54/476 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY TM+ + + +++ F L+ E G+ + T +++ G++ A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M L C SYT ++ L V++A ++ M + G PN +T L+
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 297
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
L ++G+ +A +F M + GV P N +I K G + I M++N
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV-----------------E 280
Y L K + + L V F+P ++ + + +
Sbjct: 358 DWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNK 417
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+++ + L + L+ L+KK L LL+ I + + ++II+ C +
Sbjct: 418 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D AL + + Y +L+ L+K K ++ +M K G V
Sbjct: 478 VDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTT 537
Query: 401 LI------HRLGSARRPVPAAKIFSLLPE--------DQKCTAT---------------- 430
L+ H +A R + L P+ D C A
Sbjct: 538 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVAL 597
Query: 431 ----YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
YT LI + AG+ D A + + M +G P T++VLL L K R+++A
Sbjct: 598 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 653
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +TY+ +L + KR++ + + M +GI YT ++ + G D A
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM P+ +YT ++ R+++A D+ +M + G+ P+ TY +L++
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPD 205
G + A +M A +P+
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPN 773
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G TYT ++ + + R+ + + M+ +G+ D VTY ++ + G +D
Sbjct: 697 SSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYID 756
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLND----RVKEATDVY------------KEM 162
A + + M C P +Y +K L + R + + ++ + M
Sbjct: 757 RAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERM 816
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
++ GL P TY+ L+ +AG+ EEA + M G+ P++ +LI+ CC
Sbjct: 817 VKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ E M + G+N TY+S++ AG ++ A + + M K P YT +K
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++A M + G P +Y +L+ L G +E+ +F + E G D+
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 931
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
A IL + KAG +L M++ + + AL T K+ + + SL+ +V +
Sbjct: 932 AWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY--ALVTNKMHEVSSSLVSEVREE 989
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 16/189 (8%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG F YT ++D + K ++ M G A TYT ++ G ++
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ +M+ + P +V+Y + + A K M+ PN +TY +L++
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782
Query: 180 YLVRAG----------------KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+L++ + + ++ +M + G+ P + LI CKAG
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842
Query: 224 TIILILRYM 232
L+L +M
Sbjct: 843 EACLLLDHM 851
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 404 RLGSARRPVPAAKIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
R G R+ A +F ++P Q+ +YT LI A KAL ++ M R G P
Sbjct: 230 RTGELRK---ACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 286
Query: 462 SLGTFNVLLAGLEKLGRVSDAEI 484
++ F L++GL K GRV DA +
Sbjct: 287 NVRAFTFLISGLCKSGRVGDARL 309
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 188/458 (41%), Gaps = 33/458 (7%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
S W+ Q +L ++Y N V+ + KA F+ + + GF D +Y+
Sbjct: 266 SAWNFLQ-MLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKC-GFVPDVHSYSI 323
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++D + + + Y+ M GI + V+Y+S++H L AG V+ A +++ +K +
Sbjct: 324 LVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQG 383
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+ Y+ + + ++ D++ +M+ P+ Y Y+ L+ R + +EAL
Sbjct: 384 FKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEAL 443
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
E+F M G+ P+ C IL+ G L L +++ + ++ +
Sbjct: 444 EVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGL 503
Query: 252 -KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
KV ND +W + +D +V + + ID +K +L
Sbjct: 504 CKVNKPND--MWGI--------FADMIKRGYVPDTVLYSIIIDG-----FVKALDLQEAF 548
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
L ++D+ + + +++I C + + F++ + L +R Y +LI
Sbjct: 549 RLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACY 608
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-------SLLPE 423
K + EI EM G S ++ LI S + A++F L P
Sbjct: 609 CKRSNMKAALEIFREMETEGLSADSFVYTCLIGGF-SKVLAMDGAQLFMEEMMNKGLTPT 667
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
TYT LI YF G KA+ +Y +M + GI P
Sbjct: 668 ----VVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAP 701
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/492 (21%), Positives = 186/492 (37%), Gaps = 68/492 (13%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T L AK++ S +++ ++G + + +V+H + G V A+ +++ M
Sbjct: 250 TYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGM 309
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + SY+ + L V + EM + G+ PN +Y+ L+ L RAG+
Sbjct: 310 KKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRV 369
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA--------- 238
E A E+F ++++ G + D +I++ CC+ + + M +
Sbjct: 370 ELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSL 429
Query: 239 ----LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
R+ KEAL+ F++ +SD VT I ++
Sbjct: 430 IYAYCRHRQLKEALEVFEL------------------MVSDGICPNVVTCTILVHGFSNE 471
Query: 295 GLV----LILLKKKNLVAIDSLLS------------------GIMDKSIQL----DSAVI 328
GL+ L L K + + SL + GI I+ D+ +
Sbjct: 472 GLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLY 531
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
S II+ A + V Y +LI L + P+V + + M
Sbjct: 532 SIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIG 591
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSAD 445
G + L LI A +IF + E + +A YT LIG + + D
Sbjct: 592 EGLAPDRILYTSLIACYCKRSNMKAALEIFREM-ETEGLSADSFVYTCLIGGFSKVLAMD 650
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
A + M KG+ P++ T+ L+ G K+G K+ ++ L P
Sbjct: 651 GAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGD-------EKKAMAMYNSMLQAGIAPDA 703
Query: 506 EKICDLLYGGDG 517
+ C L G DG
Sbjct: 704 KLSCILGLGNDG 715
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/404 (19%), Positives = 162/404 (40%), Gaps = 26/404 (6%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK--LKECYPT 135
E +I + +F+ M+ G + + +Y+ +M ++ + + + ++ P
Sbjct: 188 EGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPN 247
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+Y Y+ L +VK A + + + QRG P N Y + ++ G+ +A+E+F
Sbjct: 248 AATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFD 307
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
M++ G PD + +IL++ CK G+ T +L M N + + L A
Sbjct: 308 GMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG 367
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
+ L +++ + + + V + + G + +L L +
Sbjct: 368 RVE-LAFELFKRLKDQGFKHDHIVYSIV--LHG-----------CCQHLDLEICYDLWND 413
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
++ + D+ S++I C HR+ AL FE V + L+
Sbjct: 414 MVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGL 473
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCTA 429
+ ++++ + G + ++IH L +P IF+ +P+ T
Sbjct: 474 IGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPD----TV 529
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
Y+ +I + A +A ++Y M +G P++ T+ L+ GL
Sbjct: 530 LYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGL 573
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTYT++++ ++ + +F+ M +G+ D + YTS++ ++ A+ I+ E
Sbjct: 564 FTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFRE 623
Query: 127 MKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
M+ + YT + K+L ++ A +EM+ +GL P TYT L+
Sbjct: 624 METEGLSADSFVYTCLIGGFSKVLAMDG----AQLFMEEMMNKGLTPTVVTYTDLIVGYF 679
Query: 183 RAGKYEEALEIFSKMQEAGVQPD-KAAC 209
+ G ++A+ +++ M +AG+ PD K +C
Sbjct: 680 KIGDEKKAMAMYNSMLQAGIAPDAKLSC 707
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G DR YT+++ + + + + +F M+ +G++ D+ YT ++ S +D
Sbjct: 591 GEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMD 650
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
GA EEM K PT+V+YT + F K+A +Y M+Q G+ P+
Sbjct: 651 GAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 70/386 (18%), Positives = 134/386 (34%), Gaps = 67/386 (17%)
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA-- 200
+K L +++ A ++ +M G PN Y+Y+VLM K + +
Sbjct: 183 LKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVE 242
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
GV+P+ A + C A + ++ L+ + + F + F +
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKA 302
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK-----NLVAIDSLLSG 315
+ F+ D + + + + G +++ + NLV+ SLL G
Sbjct: 303 IEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHG 362
Query: 316 IM----------------DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ D+ + D V S ++ C H +DL +
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQH---------------LDLEI- 406
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
++ +M Y + LI+ R+ A ++F
Sbjct: 407 -------------------CYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFE 447
Query: 420 LLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L+ D C T T L+ + + G +A + + G+ PSL T+ V++ GL K+
Sbjct: 448 LMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVN 507
Query: 478 RVSDAEIYRKEKKSIQADALSKDAVP 503
+ +D I AD + + VP
Sbjct: 508 KPNDMW-------GIFADMIKRGYVP 526
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 197/487 (40%), Gaps = 60/487 (12%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
+Y +N +LK + ++ W + + R G + +T+ + + + + E M
Sbjct: 227 NYLLNGLLKLNY-TDRCWEVYEEMERF-GIAPNLYTFNILTHVLCKDGDTGKVNKFLEKM 284
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
+E+G + D VTY ++++ G +D A +++ M + P +VSYTA M L RV
Sbjct: 285 EEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRV 344
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
+EA ++ M+ RGL P+ TY L+ + GK +E+ + M G+ PD C +L
Sbjct: 345 REAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVL 404
Query: 213 IEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF 272
+E K G +++ L + LQ F V+ D
Sbjct: 405 VEGYGKEG---------KFLSALNLVVE-------LQRFGVSISQD-------------- 434
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
I L++ L ++ A +LL + + + + + +I
Sbjct: 435 -------------------IYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELI 475
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C ALL V ++ Y A+IG L +L+ + +V EM +G
Sbjct: 476 KSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGML 535
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKI 450
+ + L + A + S ++ + T ++ ALI + + G ++L+I
Sbjct: 536 PDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEI 595
Query: 451 YKTMCRKGIHP---SLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEK 507
M + G+ P + F +L + L + ++ I+ + A +L D +EE
Sbjct: 596 QDMMLKMGLLPNPLTCNPFAILTSRLRVDVKAANMAIF----DGMNASSLWGDNESLEEN 651
Query: 508 ICDLLYG 514
+L G
Sbjct: 652 ALQVLLG 658
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 176/490 (35%), Gaps = 82/490 (16%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQ-------------- 93
A FFNWV G Y ++ ++ S +MK++ EL++
Sbjct: 117 ALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKN 176
Query: 94 ----EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
+ N D V + ++ G V + + M PT+++ + L
Sbjct: 177 LILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKL 236
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ +VY+EM + G+ PN YT+ +L L + G + + KM+E G PD
Sbjct: 237 NYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTY 296
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL-QTFKVADENDSLLWQVH 265
N LI C+ G + + M + + Y L + +V + + VH
Sbjct: 297 NTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVH 356
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
SP+ ++ N T I G K+ + SLL ++ I DS
Sbjct: 357 RGLSPDIVTYN-------TLIHG-----------YCKEGKMQESRSLLHDMIWNGISPDS 398
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
++E + AL + +++ + Y LI L + N ++E
Sbjct: 399 FTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLER 458
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
M+K GH P +I Y LI +
Sbjct: 459 MSKDGHK--------------------PELEI-------------YNELIKSFCQCDCIA 485
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
+AL + M K I P+L T+ ++ L +L R + E S+ + ++ +P +
Sbjct: 486 EALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGE-------SLVGEMVASGMLP-D 537
Query: 506 EKICDLLYGG 515
+IC L+ G
Sbjct: 538 LEICRALFYG 547
>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 194/461 (42%), Gaps = 32/461 (6%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + F ++ +++ + + + M KG+ +D V YTS+M G
Sbjct: 395 NGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESA 454
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + E+M +V+Y + L + +A VY + + GL P+ TY ++
Sbjct: 455 AFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMIN 513
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ GK E A++++++M+ V P+ CNIL+ KAGET I +L M +
Sbjct: 514 AYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICP 573
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ + L + D++L Q+H + + N V +++ GL +
Sbjct: 574 NVTIHRALLNACSKCERADTIL-QMHKRLVGMGLKANREV------YNSLITVLCGLGMT 626
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
K+ LV L+ + + I D+ + +I + + AL + + ++
Sbjct: 627 --KRATLV-----LNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPG 679
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF- 418
Y L+G L+ K EI+ +M +G L LI G A K +
Sbjct: 680 IRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYC 739
Query: 419 -----SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG- 472
L+P+ T+TY LI + G D+A ++ M + + P+ T+++L+ G
Sbjct: 740 EMVTKGLVPK----TSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGW 795
Query: 473 --LEK---LGRVSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
L K L R+S + YR E +++ A+ K VP E +
Sbjct: 796 CNLSKQPELDRIS-KKTYRTEARTLFAEMNEKGFVPCENTL 835
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 205/513 (39%), Gaps = 68/513 (13%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH-----------DRFT 68
A DL++N+ I D+ T N + W F ++GF D FT
Sbjct: 65 ALDLIRNVDIDVDTVTYNTAI---------WGFCQQGLANQGFGFLSIMVKKDTFFDSFT 115
Query: 69 YTTMLDIFGEAKRISSMKY--------VFELMQEKG---INIDAVTYTSVMHWLSNAGDV 117
++ F RI S+KY + ++ + G + + VTYT+++ +
Sbjct: 116 CNILVKGFC---RIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGL 172
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A++++EEM P +V+Y++ + L + EA + +EM + G+ PN Y +L
Sbjct: 173 SEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAIL 232
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKE 234
++ L +AG E+ S+M GV D C LI+ KAG E + L +
Sbjct: 233 VDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNC 292
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVH-PQFSPEFISDNDAVEFVTTDIEGPLSID 293
+ Y + D +SLL + Q P ++ + + T +G L +
Sbjct: 293 IPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTK--KGMLDVA 350
Query: 294 QGLVLILLKKKNL-------VAIDSLL-SGIMDKSIQL-----------DSAVISTIIEV 334
++ +L + + ID L +G D ++ L +S ++ I
Sbjct: 351 VRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINN 410
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
R+ + A +Y + L L+R Y +L+ K + E+M + G
Sbjct: 411 LKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFD 470
Query: 395 VYLGALLIH---RLG--SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALK 449
V +LI+ RLG A + L P+ ATY +I Y G + A+K
Sbjct: 471 VVAYNVLINGLLRLGKYDAESVYSGIRELGLAPD----RATYNTMINAYCKQGKLENAIK 526
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M + P+ T N+L+ GL K G A
Sbjct: 527 LWNEMKGHSVMPNSITCNILVGGLSKAGETERA 559
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 178/428 (41%), Gaps = 33/428 (7%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ + Y T++D +A + + ++ M+ G+ ++ + ++ L ++ A +
Sbjct: 365 NAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLC 424
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+ M K V+YT+ M F R A + ++M + G+ + Y VL+ L+R
Sbjct: 425 KYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRL 484
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK-----ENRLAL 239
GKY +A ++S ++E G+ PD+A N +I CK G+ I + MK N +
Sbjct: 485 GKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITC 543
Query: 240 RYPV--FKEALQTFKVADE-NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
V +A +T + D N+ LLW + P + N + D
Sbjct: 544 NILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADT---------- 593
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
IL K LV + ++ + V +++I V C A L K +
Sbjct: 594 --ILQMHKRLVGM----------GLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGI 641
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
+ + Y ALI K + K +M G S G+ LL+ L +A A +
Sbjct: 642 SADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYE 701
Query: 417 IFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
I S + + + Y LI + G+ +A+K Y M KG+ P T+NVL+
Sbjct: 702 ILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFA 761
Query: 475 KLGRVSDA 482
K+G++ A
Sbjct: 762 KVGKMDQA 769
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G DR TY TM++ + + ++ + ++ M+ + +++T ++ LS AG+
Sbjct: 497 RELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGET 556
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+++ EM L P + + A + +R ++K ++ GL N Y L
Sbjct: 557 ERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSL 616
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ L G + A + + M + G+ D N LI
Sbjct: 617 ITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIH 653
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 165/448 (36%), Gaps = 55/448 (12%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
++ + +L++ I++D VTY + + G + M K+ + +
Sbjct: 58 KMGHLSLALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCN 117
Query: 141 AYMKILFLNDRVKEATDVYKEMIQ--------RGLPPNCYTYTVLMEYLVRAGKYEEALE 192
+K VK V +I L PN TYT L+ + EAL
Sbjct: 118 ILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALS 177
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMKENRLALRYPVFKEALQ 249
++ +M G PD + +I CK G E + ++ + M N + Y + ++L
Sbjct: 178 LYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSL- 236
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFV--TTDIEGPL----SIDQGLVLILLKK 303
FK +S ++Q + I + + V TT I+G S + + L K
Sbjct: 237 -FKAGSAWESFIYQ------SQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAK 289
Query: 304 KNLV--------------------AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
N + +SLL + K + + S+II + + G
Sbjct: 290 LNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSII----NGYTKKG 345
Query: 344 AL-LAFEYSVKM-DLNLERTAYL--ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGA 399
L +A KM D N+ AY+ LI +K ++ EM G ++
Sbjct: 346 MLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVD 405
Query: 400 LLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRK 457
I+ L R+ A + + YT+L+ +F G A + + M
Sbjct: 406 AFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAET 465
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
GI + +NVL+ GL +LG+ +Y
Sbjct: 466 GIKFDVVAYNVLINGLLRLGKYDAESVY 493
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 135/337 (40%), Gaps = 43/337 (12%)
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G + +++S+M GV P+ NIL+ CK G + ++R + + + Y
Sbjct: 25 GLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRNVDIDVDTVTY--- 81
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK-- 302
++ +W F + ++ N F++ ++ D IL+K
Sbjct: 82 -------------NTAIWG----FCQQGLA-NQGFGFLSIMVKKDTFFDSFTCNILVKGF 123
Query: 303 ------KKNLVAIDSLLSGIMD----KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
K +D+L+ + D +++ + +T+I C AL +E +
Sbjct: 124 CRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMI 183
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
+ Y ++I L K + ++ EM K G + + A+L+ L A
Sbjct: 184 SDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG--- 240
Query: 413 PAAKIFSLLPEDQKCTATY-----TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A + F + C ++ T LI F AG +D+A ++ T+ + P+ T+
Sbjct: 241 SAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYT 300
Query: 468 VLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
++ G KLG + AE + EKK + + ++ ++
Sbjct: 301 AMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSI 337
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 91/164 (55%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TYT+++D + K ++ K+VF + +G+ + +Y+ +++ L VD
Sbjct: 293 QGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDE 352
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV +++EM LK P V+Y++ + L + R+ + D+ E+ RG P N TY L+
Sbjct: 353 AVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLN 412
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
L + + ++A+ + +KM++ G+QPD + L++ CK G +
Sbjct: 413 GLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLK 456
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 90/165 (54%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY++++D ++ RIS + + + + +G + +TY S+++ L VD A+ + +M
Sbjct: 371 TYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKM 430
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K + P + +YT + L N R+K+A +Y++++ +G P N YTV++ L + G +
Sbjct: 431 KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFF 490
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+EAL + S+M++ G PD LI K + + +LR M
Sbjct: 491 DEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/474 (20%), Positives = 189/474 (39%), Gaps = 70/474 (14%)
Query: 29 IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMK 86
I+ + +T N ++ + + F+ V++ G+ D T T+L ++
Sbjct: 84 IQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEAL 143
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK-LKECYPTIVSYTAYMKI 145
+ + K ++D V+Y ++++ L +G+ A+ + +++ L P ++ YTA +
Sbjct: 144 NFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDS 203
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ V +A D+Y EMI + + PN T+ L+ G+ +EA+ + ++M V P+
Sbjct: 204 FCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPN 263
Query: 206 KAACNILIEKCCKAGETRTIILILRYM----------------------KE--------N 235
NILI+ CK GE + +L M KE N
Sbjct: 264 VYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFN 323
Query: 236 RLALR--------YPVFKEALQTFKVADENDSLLWQVH-PQFSPEFISDNDAVEFVTTDI 286
++LR Y V L K+ DE L ++H +P ++ + ++ +
Sbjct: 324 TISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCK-- 381
Query: 287 EGPLSIDQGLVLILLKK---KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
G +S L+ + + N++ +SLL+G+ C + + D
Sbjct: 382 SGRISDVWDLIDEINNRGQPANIITYNSLLNGL-------------------CKNHQVDK 422
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+ + + + Y L+ L K I +++ G+ L + + ++I+
Sbjct: 423 AIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMIN 482
Query: 404 RLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTM 454
L A + S + ED C TY LI F KA+K+ + M
Sbjct: 483 GLCKEGFFDEALSLLSQM-EDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 208/509 (40%), Gaps = 53/509 (10%)
Query: 9 YKILKYSTWDSAQDLLKNLPIK-WDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRF 67
+ IL+Y+T +S L + L I+ S+ N ++ A FN + F
Sbjct: 3 FTILRYATPNSFLLLNRRLHIQPLPSFIDN--------LDDAVSSFNHILHMNNHTPPIF 54
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+ +L + + M+ KGI + T+ +++ S+ ++ A ++ ++
Sbjct: 55 EFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKI 114
Query: 128 KLKECY-PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
LK Y P V+ ++ L LN +VKEA + + +I++ + +Y L+ L ++G+
Sbjct: 115 -LKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGE 173
Query: 187 YEEALEIFSKMQEAG-VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP--- 242
AL++ K++ V+PD +I+ CK + +I E + YP
Sbjct: 174 TRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCK---DKLVIDAYDLYSEMIVKKIYPNVV 230
Query: 243 VFKEALQTFKVADE--------NDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLS-- 291
F + F + + N+ L V+P ++ + D E LS
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290
Query: 292 IDQGLVLILLKKKNLVAIDSLLSG-IMDKSIQLDSAVISTI-------------IEVN-- 335
I QG+ + N+V SL+ G + K + V +TI + +N
Sbjct: 291 IKQGV------EPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGL 344
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C ++ D A+ F+ ++ Y +LI L K V ++++E+ G +
Sbjct: 345 CKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANI 404
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKT 453
L++ L + A + + + ++ Q +TYT L+ G A +IY+
Sbjct: 405 ITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQD 464
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ KG ++ + V++ GL K G +A
Sbjct: 465 LLCKGYPLNIRMYTVMINGLCKEGFFDEA 493
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D TYTT++D + R+ + +++ + KG ++ YT +++ L G
Sbjct: 431 KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFF 490
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
D A+++ +M+ C P V+Y + LF N++ +A + +EMI R
Sbjct: 491 DEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYF 439
++ EM+ + VY +LI L A + S++ + + TYT+L+ YF
Sbjct: 251 LLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYF 310
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
+KA ++ T+ +G+ P++ +++V++ GL K V +A KE
Sbjct: 311 LVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKE 359
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 194/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSNTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V + I N A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVE-EMKGSGIKPN-AITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E Y LI K + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H +A P+ A+K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPNAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 458
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 145/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CK+G +L+ M
Sbjct: 263 PGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F A + D + + + I + + + P+
Sbjct: 318 -IRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPNAYNPM- 375
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ L ++L+ +M +Q D ++T+I + D A +
Sbjct: 376 -----IEYLCNNGQASKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 430 LRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDH 469
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 195/486 (40%), Gaps = 79/486 (16%)
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+LD + R +M V+ M +G + + VTY +++ GD A +++EM K+
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+PT+V YT ++ L R+ EA +++ M G+ PN YTY +M+ + ++AL
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283
Query: 192 EIFSKM-----------------------------------QEAGVQPDKAACNILIEKC 216
E++ +M GV P+ N LI+
Sbjct: 284 ELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343
Query: 217 CKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEF 272
CKAG + + ++++ + Y + + L +E D LL ++ + F P
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
++ N T I+G K+ N+ + S + +K I+ + ST+I
Sbjct: 404 VTYN-------TLIDG-----------YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ C + + A+ + V L + AY ALI K + + +EM +AG
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKCTAT--------------YTALIGV 437
V+ + LI L R A K+F + D + T YTALI
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADAL 497
+ G KA K + M G+ P + T V++ G + + D + +QAD L
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMM-------LQADIL 618
Query: 498 SKDAVP 503
+P
Sbjct: 619 KMGIIP 624
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +GF + TY T++D + + + V M EKGI + +T+++++ AG +
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ ++ EM +K P +V+YTA + F + KEA ++KEM + GL PN +T + L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L + G+ +A+++F + + G + N L C LI + R+
Sbjct: 515 IDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 82/157 (52%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTY+ ++ R+ + + M++KG +AVTY +++ G+++ A+ +
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M K P I++++ + +++ A +Y EM+ +GL P+ YT L++ +
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
G +EA + +MQEAG+ P+ + LI+ CK G
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
F Y ++D + +A +S + +++ I D TY+ ++ L ++ A + +E
Sbjct: 334 FVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQE 393
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK K P V+Y + +++A +V +M ++G+ PN T++ L++ +AGK
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
E A+ ++++M G+ PD A LI+ K G T+ + + M+E L
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/431 (19%), Positives = 156/431 (36%), Gaps = 46/431 (10%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G + +TY TM+D + + + ++ M G+ + VT+ ++ L ++
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEM 314
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A +M P I Y + + EA ++ E+ + + P+ +TY++L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
++ L + EEA + +M++ G P+ N LI+ CK G I + M E +
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
F + + A + ++ + + D V T I+G
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD---VVAYTALIDGH-------- 483
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K N L + + + + +S +I+ C R A+ F D
Sbjct: 484 ---FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTD-- 538
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
T K E+ + H + LI L + R A+K
Sbjct: 539 ----------------TTGSKTNELDRSLCSPNH----VMYTALIQGLCTDGRIFKASKF 578
Query: 418 FSLLPEDQKCTA------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
FS D +C+ T +I +F A + + + + GI P+ + VL
Sbjct: 579 FS----DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAK 634
Query: 472 GLEKLGRVSDA 482
G E+ G + A
Sbjct: 635 GYEESGYLKSA 645
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 127/566 (22%), Positives = 217/566 (38%), Gaps = 90/566 (15%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS-----RSRGFNHD 65
+ K W A +++ K D+ Q++ + +A LF +S R +
Sbjct: 85 LCKEGRWSDALVMIEREDFKLDTVLCTQMISG---LMEASLFDEAISFLHRMRCNSCIPN 141
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
TY T+L F + K++ K + +M ++G N + + S++H NA D A + +
Sbjct: 142 VVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLK 201
Query: 126 EMKLKECYPTIVSYTAYM------------KILFLNDRVKE------------------- 154
M C P V+Y ++ +L L ++V E
Sbjct: 202 RMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFAR 261
Query: 155 ----------ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
A + K M+ +G P+ TY+ ++ +L A K E+A +F +M+ GV P
Sbjct: 262 CLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNP 321
Query: 205 DKAACNILIEKCCKAG----------ETRTI----------ILILRYMKENRLALRYPVF 244
D ILI+ CKAG E R+I L+ Y+K +L +F
Sbjct: 322 DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIF 381
Query: 245 KEAL------QTFKVADENDSLLWQVHPQFSPEF------ISDNDAVEFV----TTDIEG 288
+ T + D L Q + E SDN +F TD
Sbjct: 382 NRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIA 441
Query: 289 PLSIDQG-LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
P + G L+ L K +V LL ++ + + + +I+ C + D A
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F K Y +LI + K +++ +M ++ + V +I L
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCR 561
Query: 408 ARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
A K+ S++ E++ C+ TYTALI +G D +L+++ M KG P+
Sbjct: 562 IGECQKALKLLSMM-EEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYV 620
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKEKK 490
T+ VL+ G + +A E K
Sbjct: 621 TYRVLINHCCAAGLLDEAHSLLSEMK 646
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 142/329 (43%), Gaps = 25/329 (7%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++D +A ++ + + + M G + + Y +++ G +D A ++ M
Sbjct: 446 TYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRM 505
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
PT+ +YT+ + +F + R+ A V +M++ PN TYT +++ L R G+
Sbjct: 506 SKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGEC 565
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
++AL++ S M+E G P+ LI+ K+G+ + + M A Y ++
Sbjct: 566 QKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVL 625
Query: 248 LQTFKVA---DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ A DE SLL ++ + P++ ++G S+ QG K
Sbjct: 626 INHCCAAGLLDEAHSLLSEMKQTYWPKY-------------LQGYCSVVQGF------SK 666
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA-- 362
+A LL + + V +I+ R + AL + +++ +L T+
Sbjct: 667 KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKD 726
Query: 363 -YLALIGILIKLNTFPKVAEIVEEMTKAG 390
Y +LI L + K E+ E+T+ G
Sbjct: 727 MYTSLIQALCLASQLEKAFELYSEITRKG 755
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 182/491 (37%), Gaps = 70/491 (14%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVN---QVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
S+ +A LK+ + T N QVL T M+ + +S S GF D+FT
Sbjct: 22 SSSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSES-GFCMDKFTVGC 80
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
+ R S +++ + +D V T ++ L A D A++ M+
Sbjct: 81 FAQALCKEGRWSD---ALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNS 137
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C P +V+Y + ++ + M++ G PN + L+ A Y A
Sbjct: 138 CIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAY 197
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
++ +M + G P A NI I C E + + LAL V++E L +
Sbjct: 198 KLLKRMADCGCPPGYVAYNIFIGSICGGEELPS---------PDLLALAEKVYEEMLASS 248
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
V ++ ++ F + G D +I +
Sbjct: 249 CVLNKVNT-------------------ANFARC-LCGMGKFDMAFQIIKV---------- 278
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+M K D++ S +I C+ + + A L F+ + +N + Y LI
Sbjct: 279 ----MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFC 334
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---T 428
K + +EM G S V L+H A++ A+ IF+ + D C T
Sbjct: 335 KAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMI-DAGCPPNT 393
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMC----------------RKGIHPSLGTFNVLLAG 472
TY+AL+ AG KA ++Y + I P++ T+ L+ G
Sbjct: 394 ITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDG 453
Query: 473 LEKLGRVSDAE 483
L K +V DA+
Sbjct: 454 LCKAHKVVDAQ 464
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 21/336 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + Y ++D F + +I + + VF M + G TYTS++ + +D
Sbjct: 472 SNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLD 531
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +M C P +V+YTA + L ++A + M ++G PN TYT L+
Sbjct: 532 LAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALI 591
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L ++GK + +L++F +M G P+ +LI CC AG +L MK+
Sbjct: 592 DGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQT--- 648
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+P + LQ + V FS +FI+ +E + + P++ GL++
Sbjct: 649 -YWPKY---LQGY----------CSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLI 694
Query: 299 ILLKKKN-LVAIDSLLSGIMDKSIQLD---SAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
K L L +M+ S L+ + +++I+ C + + A + +
Sbjct: 695 DNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRK 754
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ E + ++ LI LIK+N + + ++ + G
Sbjct: 755 GVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEG 790
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y +++ F + K I+S+ + EL + I A Y ++ S AG ++ A+ + +EM
Sbjct: 657 YCSVVQGFSK-KFIASLGLLEELESHGTVPI-APVYGLLIDNFSKAGRLEEALELHKEMM 714
Query: 129 LKECYPTIVS---YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
I S YT+ ++ L L ++++A ++Y E+ ++G+ P + L++ L++
Sbjct: 715 ELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVN 774
Query: 186 KYEEALEIFSKMQEAGVQ 203
K+ EAL++ + + GV
Sbjct: 775 KWNEALQLCYSICDEGVN 792
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 190/468 (40%), Gaps = 70/468 (14%)
Query: 23 LLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNH-DRFTYTTMLDIFGEA 79
L+ ++P+ D+YT N VLK K W + R R H + T+ T + F +
Sbjct: 206 LIASMPVAPDTYTYNTVLKGLC-CAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQN 264
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ + E M + G D + Y+++++ S G VD A+ + M C P V Y
Sbjct: 265 GLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCY 321
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
A +K L + R +E ++ EM+++ PPN T++ L+ L + E A+E+ +MQ+
Sbjct: 322 NAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 381
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
G PD + N +I C + + R +AL+ K S
Sbjct: 382 YGYMPDVVSYNTIIS--CFSDQARA--------------------DDALKLLK------S 413
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
+L + P+ IS N ++ L K K L++ ++ K
Sbjct: 414 MLCK------PDTISFN------------------AVLKCLCKAKRWYDAVELVAKMLKK 449
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+++ + +I+ C + + A+ FE K + Y +LI +
Sbjct: 450 DCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMA 509
Query: 380 AEIVEEMTKAGH--SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTAL 434
++ M S L L + +AR I ++ ED C T+ L
Sbjct: 510 FDLFRSMPCRADIFSYNATLKGLCM----AARWDDAGELIADMVTED--CLPNEVTFNIL 563
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
I G ++A+ +Y+ M + GI P + T+N L+ G + GR+ DA
Sbjct: 564 ISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 611
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDI 75
D A LLK++ K D+ + N VLK ++ + V++ + + T+ ++D
Sbjct: 405 DDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDS 464
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ ++ VFELM + D VTY+S+++ S G + A +++ M C
Sbjct: 465 LCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRAD 521
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
I SY A +K L + R +A ++ +M+ PN T+ +L+ L + G A++++
Sbjct: 522 IFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYE 581
Query: 196 KMQEAGVQPDKAACNILI 213
+M + G+ PD N LI
Sbjct: 582 QMPKYGITPDIFTYNALI 599
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 181/451 (40%), Gaps = 52/451 (11%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D ++ T++ + + + V E + G + VTYT+++ +G + A+ +
Sbjct: 149 DAVSHNTLVAGYCRDGSLGDAERVVEAARASG-TANVVTYTALIDGYCRSGRLADALRLI 207
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M + P +Y +K L + ++A ++ +EMI+ PN T+ + +
Sbjct: 208 ASMPVA---PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQN 264
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM--KENRLALRYP 242
G + A+E+ +M + G PD + L+ + G + +L M + N +
Sbjct: 265 GLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTV----- 319
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFI----SDNDAVEFVTTDIEGPLSIDQGLVL 298
+ AL+ +A W+ + E + NDA F T L+
Sbjct: 320 CYNAALKGLCIAGR-----WEEVGELIAEMVRKDCPPNDAT-FST------------LIN 361
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L + + + +L + D +TII D R D AL + M
Sbjct: 362 SLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLK---SMLCKP 418
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+ ++ A++ L K + E+V +M K + +LI L + A ++F
Sbjct: 419 DTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVF 478
Query: 419 SLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTM-CRKGIHPSLGTFNVLLAGLE 474
L+P+ +C TY++LI + G + A ++++M CR I ++N L GL
Sbjct: 479 ELMPK-YRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIF----SYNATLKGLC 533
Query: 475 KLGRVSDAEIYRKEKKSIQADALSKDAVPME 505
R DA + AD +++D +P E
Sbjct: 534 MAARWDDA-------GELIADMVTEDCLPNE 557
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAW-----LFFNWVSRSRGFNHDRFTYTTMLD 74
A DL +++P + D ++ N LK M W L + V+ N T+ ++
Sbjct: 509 AFDLFRSMPCRADIFSYNATLKGLC-MAARWDDAGELIADMVTEDCLPNE--VTFNILIS 565
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ ++ V+E M + GI D TY ++++ S G +D A+ M C P
Sbjct: 566 SLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEP 622
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
+SY + +K L +R K+A + EM+++ PN T+
Sbjct: 623 DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 184/467 (39%), Gaps = 68/467 (14%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N LK MEK G + D +TY T++ + K + + + ++E
Sbjct: 339 MNDALKIKELMEK-----------NGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKE- 386
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G VT+T++++ A D A+ + +M +C + + + L DR+KEA
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
++ E+ GL PN TYT +++ ++GK + ALE+ M+ G QP+ N L+
Sbjct: 447 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 506
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
K + + +L M+++ + + LQ DE+D
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ--GQCDEHD----------------- 547
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
D L + ++N ++ D + + +
Sbjct: 548 ----------------FDNAFRLFEMMEQN--------------GLKPDEHAYAVLTDAL 577
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R + A+ + V+ + L + Y LI K A ++E M G +
Sbjct: 578 CKAGRAEE---AYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLP-EDQKCTA-TYTALIGVYFSAGSADKALKIYKT 453
Y ++L+H L +R A I + KCT YT LI G D A ++Y
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
M G PS T+ V + K GR+ DAE I + E++ + D ++
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
++++ R +G + YTT++D F +A + E M ++G D+ TY+ ++H L
Sbjct: 587 YSFIVR-KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 645
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
++ A+ I ++M L+ TI +YT + + + A +Y EM G P+
Sbjct: 646 KQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSAT 705
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
TYTV + + G+ E+A ++ KM+ GV PD NILI+ C G
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 172/458 (37%), Gaps = 58/458 (12%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
P W T+ L E L N V GF T+T +++ + A++
Sbjct: 356 PDDWTYNTLIYGLCDQKTEEAEELLNNAVKE--GFTPTVVTFTNLINGYCMAEKFDDALR 413
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ M +D + +++ L + A + E+ P +++YT+ +
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ +V A +V K M + G PN +TY LM LV+ K +A+ + +KMQ+ G+ P+
Sbjct: 474 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 533
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQV 264
L++ C + + M++N L Y V +AL A+E S + +
Sbjct: 534 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 593
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+ + TT I+G K N +L+ ++D+ D
Sbjct: 594 GVALTK---------VYYTTLIDG-----------FSKAGNTDFAATLIERMIDEGCTPD 633
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S S ++ C +R + AL + + AY LI +++ +
Sbjct: 634 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 693
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSA 444
EMT +GH P+A TYT I Y G
Sbjct: 694 EMTSSGHK--------------------PSA-------------TTYTVFINSYCKEGRL 720
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ A + M R+G+ P + T+N+L+ G +G + A
Sbjct: 721 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 106/510 (20%), Positives = 193/510 (37%), Gaps = 62/510 (12%)
Query: 3 DTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVN--QVLKTHPPMEKAWLFFNWVSRSR 60
D ++ + +IL W+ + + P ++ + + T P A FF W++R
Sbjct: 25 DVVAELGRILSTRRWNKGRAYKRLAPSVTAAHVADLFRAESTAPEPATALAFFEWLARRD 84
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKY---VFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
GF H ++ +L + ++R + +Y V ++ D + + G
Sbjct: 85 GFRHTADSHAALLHLL--SRRRAPAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSA 142
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A++ +CY + A D + VY +++Q GL P+ TY +
Sbjct: 143 RLALS-------PKCYNFALRSLARF------DMTEYMGRVYSQLVQDGLLPDTVTYNTM 189
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT---IILILRYMKE 234
++ + G A F + E G++P+ CN L+ C+ GE R + L++ M
Sbjct: 190 IKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGC 249
Query: 235 NRLALRYPVFKEALQTFKVADENDSL-LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
R Y + + L K E L L SP A F+ + + +
Sbjct: 250 QRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNV----RAFTFLISGLCKSGRVG 305
Query: 294 QGLVLILLKKKNLVAIDSLLS-----------GIMDKSIQL-----------DSAVISTI 331
+L +N V + S+++ G M+ ++++ D +T+
Sbjct: 306 DARLLFDAMPQNGV-VPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I CD + + L +VK + LI F + +M +
Sbjct: 365 IYGLCDQKTEEAEEL-LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423
Query: 392 SLGVYLGALLIH------RLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSAD 445
L + + LI+ RL A+ + L+P TYT++I Y +G D
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN----VITYTSIIDGYCKSGKVD 479
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
AL++ K M R G P+ T+N L+ GL K
Sbjct: 480 IALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 181/476 (38%), Gaps = 54/476 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY TM+ + + +++ F L+ E G+ + T +++ G++ A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M L C SYT ++ L V+EA ++ M + G PN +T L+
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISG 297
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
L ++G+ +A +F M + GV P N +I K G + I M++N
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV-----------------E 280
Y L K + + L V F+P ++ + + +
Sbjct: 358 DWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNK 417
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+++ + L + L+ L+KK L LL+ I + + ++II+ C +
Sbjct: 418 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D AL + + Y +L+ L+K K ++ +M K G V
Sbjct: 478 VDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTT 537
Query: 401 LI------HRLGSARRPVPAAKIFSLLPE--------DQKCTAT---------------- 430
L+ H +A R + L P+ D C A
Sbjct: 538 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVAL 597
Query: 431 ----YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
YT LI + AG+ D A + + M +G P T++VLL L K R+++A
Sbjct: 598 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 653
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +TY+ +L + KR++ + + M +GI YT ++ + G D A
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM P+ +YT ++ R+++A D+ +M + G+ P+ TY +L++
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPD 205
G + A +M A +P+
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPN 773
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G TYT ++ + + R+ + + M+ +G+ D VTY ++ + G +D
Sbjct: 697 SSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYID 756
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLND----RVKEATDVY------------KEM 162
A + + M C P +Y +K L + R + + ++ + M
Sbjct: 757 RAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERM 816
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
++ GL P TY+ L+ +AG+ EEA + M G+ P++ +LI+ CC
Sbjct: 817 VKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ E M + G+N TY+S++ AG ++ A + + M K P YT +K
Sbjct: 812 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 871
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++A M + G P +Y +L+ L G +E+ +F + E G D+
Sbjct: 872 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 931
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
A IL + KAG +L M++ + + AL T K+ + + SL+ +V +
Sbjct: 932 AWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY--ALVTNKMHEVSSSLVSEVREE 989
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 16/189 (8%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG F YT ++D + K ++ M G A TYT ++ G ++
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ +M+ + P +V+Y + + A K M+ PN +TY +L++
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782
Query: 180 YLVRAG----------------KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+L++ + + ++ +M + G+ P + LI CKAG
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842
Query: 224 TIILILRYM 232
L+L +M
Sbjct: 843 EACLLLDHM 851
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 404 RLGSARRPVPAAKIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
R G R+ A +F ++P Q+ +YT LI A +AL ++ M R G P
Sbjct: 230 RTGELRK---ACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSP 286
Query: 462 SLGTFNVLLAGLEKLGRVSDAEI 484
++ F L++GL K GRV DA +
Sbjct: 287 NVRAFTFLISGLCKSGRVGDARL 309
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 164/420 (39%), Gaps = 51/420 (12%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y ++ F +A ++ + V + M+ +G D VTY ++ + G +D A+ I+
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EE+ C PT+++YT ++ L+ + A + EM+ +GL P+ TY ++ + +
Sbjct: 197 EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKE 256
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
++A E+ + G +PD NIL+ G+
Sbjct: 257 MMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGK----------------------- 293
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
W + E IS VT I L+ L +
Sbjct: 294 -----------------WSEGEKLISEMISIGCKPNVVTHSI---------LIGTLCRDG 327
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+ +LL + +K ++ D+ +I C R D A EY + + Y
Sbjct: 328 KVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYN 387
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL-GSARRPVPAAKIFSLLPE 423
++ L + + E+ E++ + G V L L S R I LL +
Sbjct: 388 TIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ 447
Query: 424 D-QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY +LI G D+A+++ M P++ ++N++L GL K+ R +DA
Sbjct: 448 GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDA 507
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+SRGF D TY M+ F ++ +FE + + +TYT ++ G +
Sbjct: 165 KSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGI 224
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ + +EM K P ++Y A ++ + V +A ++ + + RG P+ TY +L
Sbjct: 225 DVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNIL 284
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L+ GK+ E ++ S+M G +P+ +ILI C+ G+ + +LR MKE L
Sbjct: 285 LRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL 344
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 5/224 (2%)
Query: 18 DSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTM 72
D A +LL++L K D T N +L+T K +S S G + T++ +
Sbjct: 260 DKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSIL 319
Query: 73 LDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
+ ++ + M+EKG+ DA Y ++ G +D A E M C
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P IV+Y M L + +A +V++++ + G PPN +Y L L +G ALE
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
+ K+ G+ PD+ N LI C+ G I +L M+ R
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D + Y ++ F R+ E M G D V Y ++M L G
Sbjct: 340 KEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKA 399
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ ++E++ C P + SY L+ + A ++ +++ +G+ P+ TY L
Sbjct: 400 DQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSL 459
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ L R G +EA+E+ MQ +P+ + NI++ CK I +L M E
Sbjct: 460 ISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTE 516
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 6/179 (3%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAG 115
S+G D TY + I G K + K FEL++ +G D +TY ++ L + G
Sbjct: 236 SKGLEPDTLTYNAI--IRGMCKEMMVDK-AFELLRSLSSRGCKPDIITYNILLRTLLSRG 292
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ EM C P +V+++ + L + +V+EA ++ + M ++GL P+ Y Y
Sbjct: 293 KWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYD 352
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ R G+ + A E M G PD N ++ C+ G+ + + + E
Sbjct: 353 PLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE 411
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 68 TYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+Y T+ ++ R +++ + +L+ + GI+ D +TY S++ L G VD A+ + +
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQ-GIDPDEITYNSLISCLCRDGMVDEAIELLVD 478
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M+ P +VSY + L +R +A +V M ++G PN TY +L+E + +G
Sbjct: 479 MQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGL 538
Query: 187 YEEALEIFSKMQ 198
EA+E+ + +
Sbjct: 539 RAEAMELANSLH 550
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 128/339 (37%), Gaps = 33/339 (9%)
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE----TRTIILILRYM 232
L+ RAGKY E+L M + G PD C LI+ + TR + ++ RY
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDN---------------- 276
K + A + ++ ++ + N L F P+ ++ N
Sbjct: 135 KPDVFAYN-ALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 277 DAVEFVTTDIEGPLSIDQGLVL--ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
+ E + D P I +++ +L VA+ LL ++ K ++ D+ + II
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAM-KLLDEMLSKGLEPDTLTYNAIIRG 252
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C D A + Y L+ L+ + + +++ EM G
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALK 449
V ++LI L + A + + E D C Y LI + G D A +
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYC---YDPLIAGFCREGRLDLATE 369
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
+ M G P + +N ++AGL + G+ A E++ K
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEK 408
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 176/439 (40%), Gaps = 23/439 (5%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+D + I + +FE M+ +G+ D VTY S++ G +D V +EE
Sbjct: 134 FTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P +++Y + ++ + + ++EM Q GL PN +Y+ L++ +
Sbjct: 194 MKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDM 253
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPV 243
++AL+ + M+ G+ P++ L++ CK G + M + + + Y
Sbjct: 254 MQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTA 313
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ L + E + L ++ VT + L+ L+ +K
Sbjct: 314 LIDGLCDVERIKEAEELFGKM-----------------VTAGVIPNLASYTALIHGFVKA 356
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
KN+ LL + + I+ D + T I C + + A + + + Y
Sbjct: 357 KNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIY 416
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
L+ K + ++EEM + + +LI L + A F +
Sbjct: 417 TTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISN 476
Query: 424 D---QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
D Q A YTA+I + A +++ M +KG+ P + L+ G K G V
Sbjct: 477 DFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVV 536
Query: 481 DAEIYRKEKKSIQADALSK 499
A R + I ++ ++
Sbjct: 537 QALALRDKMAEIGVESGAR 555
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 165/380 (43%), Gaps = 17/380 (4%)
Query: 24 LKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAK 80
+K++ + D T N ++ + K FF + +S G + +Y+T++D F +
Sbjct: 194 MKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQS-GLKPNVVSYSTLVDAFCKED 252
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+ + M+ G+ + TYTS++ G++ A + +EM +V+YT
Sbjct: 253 MMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYT 312
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
A + L +R+KEA +++ +M+ G+ PN +YT L+ V+A + ALE+ +M+
Sbjct: 313 ALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGR 372
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
G++PD I C + +++ M+E + TF D+
Sbjct: 373 GIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGI---------KANTFIYTTLMDAY 423
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
+P + + ++ T + + ID GL L K AID D
Sbjct: 424 FKSENPSEGLHLLEEMLELDIEVTAVTFCVLID-GLCKNKLVSK---AIDYFGRISNDFG 479
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
+Q ++A+ + +I+ C + + A FE + L +RTAY +LI +K +
Sbjct: 480 LQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQAL 539
Query: 381 EIVEEMTKAGHSLGVYLGAL 400
+ ++M + G G G L
Sbjct: 540 ALRDKMAEIGVESGARFGDL 559
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY +M+D +G+ R+ Y FE M+ D +TY ++++ G +
Sbjct: 162 RGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPK 221
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + EMK P +VSY+ + D +++A Y +M + GL PN +TYT L++
Sbjct: 222 GLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVD 281
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ G +A + +M + GV+ + LI+ C
Sbjct: 282 AYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLC 319
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 141/375 (37%), Gaps = 28/375 (7%)
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C P + A +L D +EA + +M + + P + L+ R GK +
Sbjct: 59 CVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMK 118
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
F M AG +P NI+I+ CK G+ + MK L + + +
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGY 178
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
D ++ F E S + + +T + L+ K L
Sbjct: 179 GKVGRLDDTVY-----FFEEMKSMSCEPDVITYNT---------LINCFCKFGKLPKGLE 224
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+ ++ + ST+++ C AL + ++ L Y +L+
Sbjct: 225 FFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYC 284
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQ 425
K+ + +EM++ G V LI L R A ++F ++P
Sbjct: 285 KIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPN-- 342
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL---GTFNVLLAGLEKLGRVSDA 482
A+YTALI + A + D+AL++ M +GI P L GTF L GLEK+ +
Sbjct: 343 --LASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKI-EAAKV 399
Query: 483 EIYRKEKKSIQADAL 497
+ ++K I+A+
Sbjct: 400 VMNEMQEKGIKANTF 414
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 34/223 (15%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
P ++ FFNW S GF Y MLD+ G+ ++ +V +LM+ +G+ I T+
Sbjct: 157 PFLQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTF 216
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT-------- 156
++++ AG AV+ + M+ C P +V+++ + L R EA
Sbjct: 217 SALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKH 276
Query: 157 --------------------------DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+V+ +M G+ PN YTY+++++ L R G+ A
Sbjct: 277 RFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRA 336
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
++FS+M +AG P+ N L+ KAG T ++ + MK
Sbjct: 337 HDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMK 379
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D ++ ++ + +R + + F+ ++ + D V YTS++H AGD+ A
Sbjct: 243 GCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVYTSLVHGWCRAGDISKA 301
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ +MK+ P + +Y+ + L ++ A DV+ EMI G PN T+ LM
Sbjct: 302 EEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRV 361
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
V+AG+ E+ L+++++M+ G D + N +IE C+
Sbjct: 362 HVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCR 399
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +TY+ ++D +I+ VF M + G + +AVT+ S+M AG +
Sbjct: 312 GIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKV 371
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ ++ +MK C +SY ++ ++ ++EA + M+++G+ PN T+ +
Sbjct: 372 LKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGC 431
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+ + A ++++M+E QP+ NIL+ E+R+ ++L+ KE
Sbjct: 432 IAKLHDVNGAHRMYARMKELNCQPNTLTYNILMR---MFAESRSTDMVLKMKKE 482
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A FF+ S F D YT+++ + A IS + VF M+ GI + TY+ V
Sbjct: 266 EAQSFFD--SLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIV 323
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L G + A +++ EM C P V++ + M++ R ++ VY +M + G
Sbjct: 324 IDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGC 383
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
P + +Y ++E R EEA +I + M + GV P+ + N +
Sbjct: 384 PADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIF 429
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 32 DSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
++ T N +++ H EK +N + R G D +Y +++ + + +
Sbjct: 351 NAVTFNSLMRVHVKAGRTEKVLKVYNQMKR-LGCPADTISYNFIIESHCRDENLEEAAKI 409
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
LM +KG+ +A T+ + ++ DV+GA ++ MK C P ++Y M++
Sbjct: 410 LNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAE 469
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM-QEAGVQPDKA 207
+ + KEM + + PN TY +L+ + A ++ +M +E ++P+ +
Sbjct: 470 SRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLS 529
Query: 208 ACNILIEKCCKAGETR 223
++E KAG+ +
Sbjct: 530 VYETVLELLRKAGQLK 545
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 75/198 (37%), Gaps = 40/198 (20%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D S +I C RR + A F+ S+K + Y +L+ + K E+
Sbjct: 247 DMVAFSIVISSLCKKRRANEAQSFFD-SLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVF 305
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFS 440
+M AG VY +++I L + A +FS + D C T+ +L+ V+
Sbjct: 306 SDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEM-IDAGCDPNAVTFNSLMRVHVK 364
Query: 441 AGSADKALKIYKTM-------------------CR----------------KGIHPSLGT 465
AG +K LK+Y M CR KG+ P+ T
Sbjct: 365 AGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNAST 424
Query: 466 FNVLLAGLEKLGRVSDAE 483
FN + + KL V+ A
Sbjct: 425 FNFIFGCIAKLHDVNGAH 442
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 194/477 (40%), Gaps = 38/477 (7%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
++NL +D V VL E A FF WV RS F HDR T+ +++I G A +++
Sbjct: 3 IRNLVPSFDHELVYNVLHGAKKTEHALQFFRWVERSNLFQHDRETHLKIIEILGRASKLN 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 63 HARCILLDMPKKGLEWDEDLWVLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALF 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+ +
Sbjct: 123 KVILRRGRFMMAKRYFNKMLNEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDIT 182
Query: 204 PDKAACNILIE---KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
PD N LI + K E + ++ + Y + + D+ SL
Sbjct: 183 PDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSL 242
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
+ ++ F +A+ + T L+ L + + S+L ++DK
Sbjct: 243 MEEMKG-----FGIKPNAITYST------------LLPGLCNAEKMSEAQSILKEMVDKY 285
Query: 321 IQ-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
I D+++ +I C D A + +++ + E Y LI K + K
Sbjct: 286 IAPTDNSIFLKLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAEKYDKA 345
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQK 426
+++++ + + +H SA P+ AK +L+ + Q+
Sbjct: 346 VNLLDKLIEKDI---ILRPQSTLHMEPSAYNPMIEYLCDNGQTAKAETLVRQLMKLGVQE 402
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 403 PTALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAK 458
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 146/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G R T+ M+ F + ++ + FE M+ + I D +TY ++++ ++
Sbjct: 143 NEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVITYNTLINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+++YT +K DRV +A + +EM G+ PN TY+ L+
Sbjct: 203 EAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CKAG +L+ M
Sbjct: 263 PGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ + A++ D + + + I + + P
Sbjct: 318 -IRLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDKLIEKDIILRPQSTLHMEPSAYNP-- 374
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
++ L ++L+ +M +Q +A ++T+I + D A +
Sbjct: 375 ----MIEYLCDNGQTAKAETLVRQLMKLGVQEPTA-LNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + GH
Sbjct: 430 LRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENGH 469
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 339 RRRDGALLAFEYSVKMDL-NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
++ + AL F + + +L +R +L +I IL + + I+ +M K G L
Sbjct: 23 KKTEHALQFFRWVERSNLFQHDRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDL 82
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
L+I G + K+F + E ++ +Y AL V G A + + M
Sbjct: 83 WVLMIDSYGKKGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKML 142
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+GI P+ TFNV++ G G+V A + ++ KS
Sbjct: 143 NEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKS 178
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 172/421 (40%), Gaps = 22/421 (5%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FTY M+ + + + + +FE M++ G+ D VTY +++ G +D +V ++EE
Sbjct: 133 FTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEE 192
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P +++Y A + + A + ++EM + L PN +Y+ L++ L + G
Sbjct: 193 MKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGM 252
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR---YPV 243
+ A++ F M G+ P++ + LI+ CKAG ++ M + + L Y
Sbjct: 253 MQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTT 312
Query: 244 FKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ L + +E + L + VT +++ ++ G + K
Sbjct: 313 LLDGLCEEGMMNEAEELFRAM-------------GKAGVTPNLQAYTALIHGHI----KV 355
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+++ L + + +K I+ D + TI+ C + + + + + Y
Sbjct: 356 RSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIY 415
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
L+ K + ++EEM G + V LI L A F +P+
Sbjct: 416 TTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPD 475
Query: 424 D--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
Q A YTALI A K++ M K + P + ++ G K G +
Sbjct: 476 HDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQE 535
Query: 482 A 482
A
Sbjct: 536 A 536
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 175/436 (40%), Gaps = 23/436 (5%)
Query: 55 WVSRS---RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
W +R+ GF + + + E + + F M + + A + + +H L
Sbjct: 52 WTTRNVCVPGFG----VFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRL 107
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
S AG+ D + + + +M PT+ +Y + + + A ++++M + GL P+
Sbjct: 108 SKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDI 167
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
TY L++ + G +E++ +F +M+ G +PD N LI CK R
Sbjct: 168 VTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFRE 227
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
MK+ L + + D+L + Q + +F D V + +
Sbjct: 228 MKDKDLKPNVISYSTLI---------DALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSL 278
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
ID K NL L ++ + + L+ +T+++ C+ + A F
Sbjct: 279 IDAN-----CKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
K + AY ALI IK+ + K E+ EM + + L ++ L S +
Sbjct: 334 GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKL 393
Query: 412 VPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
I + + E YT L+ YF AG+ +A+ + + M G ++ TF L
Sbjct: 394 EECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCAL 453
Query: 470 LAGLEKLGRVSDAEIY 485
+ GL K G V +A Y
Sbjct: 454 IDGLCKRGLVQEAIYY 469
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 184/423 (43%), Gaps = 31/423 (7%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
M +A+ FF + + + + +Y+T++D + + F M G+ + TY+
Sbjct: 218 MLRAFEFFREM-KDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYS 276
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ AG++ A + +EM + IV+YT + L + EA ++++ M +
Sbjct: 277 SLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKA 336
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN YT L+ ++ ++A+E+F++M+E ++PD ++ C +
Sbjct: 337 GVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEEC 396
Query: 226 ILILRYMKENRLALRYPVFKEALQT-FKVADENDSL-LWQVHPQFSPEFISDNDAVEFVT 283
+I+ MKE+ + ++ + FK + +++ L + E V F
Sbjct: 397 KIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVT----VVTFCA 452
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM-DKSIQLDSAVISTIIEVNCDHRRRD 342
I+G L K+ LV G M D +Q + AV + +I+ C +
Sbjct: 453 L-IDG------------LCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIG 499
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
A F+ ++ ++ AY A+I +K F + + +M + G L +Y L+
Sbjct: 500 DAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLV 559
Query: 403 HRLGSARRPVPAAKIFS------LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCR 456
L + A K + ++P++ CT L+ ++ G+ D+A+++ +
Sbjct: 560 WGLSQCGQVQQARKFLAEMIGKGIIPDETLCTR----LLRKHYELGNIDEAIELQNELVE 615
Query: 457 KGI 459
KG+
Sbjct: 616 KGL 618
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 184/467 (39%), Gaps = 68/467 (14%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
+N LK MEK G + D +TY T++ + K + + + ++E
Sbjct: 224 MNDALKIKELMEK-----------NGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKE- 271
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G VT+T++++ A D A+ + +M +C + + + L DR+KEA
Sbjct: 272 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 331
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
++ E+ GL PN TYT +++ ++GK + ALE+ M+ G QP+ N L+
Sbjct: 332 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 391
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
K + + +L M+++ + + LQ DE+D
Sbjct: 392 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ--GQCDEHD----------------- 432
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
D L + ++N ++ D + + +
Sbjct: 433 ----------------FDNAFRLFEMMEQN--------------GLKPDEHAYAVLTDAL 462
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C R A A+ + V+ + L + Y LI K A ++E M G +
Sbjct: 463 CKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 519
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLP-EDQKCTA-TYTALIGVYFSAGSADKALKIYKT 453
Y ++L+H L +R A I + KCT YT LI G D A ++Y
Sbjct: 520 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 579
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALS 498
M G PS T+ V + K GR+ DAE I + E++ + D ++
Sbjct: 580 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 626
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 1/168 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
++++ R +G + YTT++D F +A + E M ++G D+ TY+ ++H L
Sbjct: 472 YSFIVR-KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 530
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
++ A+ I ++M L+ TI +YT + + + A +Y EM G P+
Sbjct: 531 KQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSAT 590
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
TYTV + + G+ E+A ++ KM+ GV PD NILI+ C G
Sbjct: 591 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 638
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 172/458 (37%), Gaps = 58/458 (12%)
Query: 28 PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKY 87
P W T+ L E L N V GF T+T +++ + A++
Sbjct: 241 PDDWTYNTLIYGLCDQKTEEAEELLNNAVKE--GFTPTVVTFTNLINGYCMAEKFDDALR 298
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ M +D + +++ L + A + E+ P +++YT+ +
Sbjct: 299 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 358
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ +V A +V K M + G PN +TY LM LV+ K +A+ + +KMQ+ G+ P+
Sbjct: 359 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 418
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQV 264
L++ C + + M++N L Y V +AL A+E S + +
Sbjct: 419 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRK 478
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+ + TT I+G K N +L+ ++D+ D
Sbjct: 479 GVALTK---------VYYTTLIDG-----------FSKAGNTDFAATLIERMIDEGCTPD 518
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
S S ++ C +R + AL + + AY LI +++ +
Sbjct: 519 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 578
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSA 444
EMT +GH P+A TYT I Y G
Sbjct: 579 EMTSSGHK--------------------PSA-------------TTYTVFINSYCKEGRL 605
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ A + M R+G+ P + T+N+L+ G +G + A
Sbjct: 606 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 643
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 181/476 (38%), Gaps = 54/476 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY TM+ + + +++ F L+ E G+ + T +++ G++ A
Sbjct: 63 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 122
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ M L C SYT ++ L V++A ++ M + G PN +T L+
Sbjct: 123 CWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISG 182
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
L ++G+ +A +F M + GV P N +I K G + I M++N
Sbjct: 183 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 242
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV-----------------E 280
Y L K + + L V F+P ++ + + +
Sbjct: 243 DWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNK 302
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+++ + L + L+ L+KK L LL+ I + + ++II+ C +
Sbjct: 303 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 362
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D AL + + Y +L+ L+K K ++ +M K G V
Sbjct: 363 VDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTT 422
Query: 401 LI------HRLGSARRPVPAAKIFSLLPE--------DQKCTAT---------------- 430
L+ H +A R + L P+ D C A
Sbjct: 423 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVAL 482
Query: 431 ----YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
YT LI + AG+ D A + + M +G P T++VLL L K R+++A
Sbjct: 483 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEA 538
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 147/392 (37%), Gaps = 50/392 (12%)
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
M V+ + + G+ D VTY +++ GD+ A + + P + A +
Sbjct: 52 MGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVL 111
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+++A ++ M G N Y+YT+L++ L A +AL +F M+ G P
Sbjct: 112 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 171
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQ 263
+ A LI CK+G L+ M +N + + + + K+ ND+L +
Sbjct: 172 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 231
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
E + N P ++ L + + LL+ + +
Sbjct: 232 -------ELMEKNGC---------HPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTP 275
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
+ +I C + D AL + L+ + LI LIK + + E++
Sbjct: 276 TVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELL 335
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
E++ G L+P TYT++I Y +G
Sbjct: 336 NEISANG-----------------------------LVPN----VITYTSIIDGYCKSGK 362
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
D AL++ K M R G P+ T+N L+ GL K
Sbjct: 363 VDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 67/145 (46%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +TY+ +L + KR++ + + M +GI YT ++ + G D A
Sbjct: 514 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 573
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ EM P+ +YT ++ R+++A D+ +M + G+ P+ TY +L++
Sbjct: 574 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 633
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPD 205
G + A +M A +P+
Sbjct: 634 CGHMGYIDRAFSTLKRMVGASCEPN 658
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G TYT ++ + + R+ + + M+ +G+ D VTY ++ + G +D
Sbjct: 582 SSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYID 641
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLND----RVKEATDVY------------KEM 162
A + + M C P +Y +K L + R + + ++ + M
Sbjct: 642 RAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERM 701
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
++ GL P TY+ L+ +AG+ EEA + M G+ P++ +LI+ CC
Sbjct: 702 VKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 756
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ E M + G+N TY+S++ AG ++ A + + M K P YT +K
Sbjct: 697 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCC 756
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++A M + G P +Y +L+ L G +E+ +F + E G D+
Sbjct: 757 DTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEV 816
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
A IL + KAG +L M++ + + AL T K+ + + SL+ +V +
Sbjct: 817 AWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY--ALVTNKMHEVSSSLVSEVREE 874
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 20/220 (9%)
Query: 32 DSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
DSYT + +L + +A + +S RG F YT ++D + K +
Sbjct: 518 DSYTYSVLLHALCKQKRLNEALPILDQMSL-RGIKCTIFAYTILIDEMLREGKHDHAKRM 576
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+ M G A TYT ++ G ++ A ++ +M+ + P +V+Y +
Sbjct: 577 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 636
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG----------------KYEEALE 192
+ A K M+ PN +TY +L+++L++ + + +
Sbjct: 637 MGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQ 696
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ +M + G+ P + LI CKAG L+L +M
Sbjct: 697 LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 736
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 404 RLGSARRPVPAAKIFSLLP--EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
R G R+ A +F ++P Q+ +YT LI A KAL ++ M R G P
Sbjct: 115 RTGELRK---ACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 171
Query: 462 SLGTFNVLLAGLEKLGRVSDAEI 484
++ F L++GL K GRV DA +
Sbjct: 172 NVRAFTFLISGLCKSGRVGDARL 194
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 194/463 (41%), Gaps = 60/463 (12%)
Query: 27 LPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI 82
LP+ + +T N V+ K +E LF ++ G + D TY +++D +G+ +
Sbjct: 195 LPVP-NVFTFNIVIDFLCKEGELVEARALFVRM--KAMGCSPDVVTYNSLIDGYGKCGDL 251
Query: 83 SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
++ + M++ G D VTY ++++ S G ++ A + + EMK + +V+++ +
Sbjct: 252 EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ V+EA ++ +M RG+ PN +TYT L++ +AG+ ++A+ + +M G+
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
P+ ++++ CK G+ +L M+ + + + LL+
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGV------------------KANELLY 413
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
TT I G + + A+D LL+ + +K ++
Sbjct: 414 --------------------TTLIHGH----------FMNNNSERALD-LLNQMKNKGME 442
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
LD ++ T+I C ++ D A L Y ++ L K + +
Sbjct: 443 LDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVAL 502
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE---DQKCTATYTALIGVYF 439
+ ++ +G V LI L A A F+ + E D A YTALI +
Sbjct: 503 LHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQA-YTALIDGFC 561
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
GS +KA+ + M KG+ + L+ G K + DA
Sbjct: 562 KIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA 604
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF + TY ++D +A IS F M+E G++ + YT+++ G ++ A
Sbjct: 510 GFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKA 569
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ EM K V YT+ + +++A + +MI+ GL + Y YT +
Sbjct: 570 MHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISG 629
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+EA + S+M G+ PDK N LI K K G
Sbjct: 630 FCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGN 670
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A FN + R G + + YT ++D F + ++ ++ M +KG+++D V YT
Sbjct: 531 ISEAISHFNKM-RELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYT 589
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ ++ A + +M + YT ++ + ++EA V EMI
Sbjct: 590 SLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGT 649
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
G+ P+ Y L+ + G EEA + ++M+
Sbjct: 650 GITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/479 (19%), Positives = 177/479 (36%), Gaps = 54/479 (11%)
Query: 15 STWDSAQD-LLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
S+W+ + ++NL V VL++ A FF W R + HD Y +ML
Sbjct: 155 SSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSML 214
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
++ + K + V LM+ +GI ++ VM S AG + A+ + M+
Sbjct: 215 EVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVE 274
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P ++ + + +R+++A + M G+ PN TY ++ + EEA+E+
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-KENRLALRYPVFKEALQTFK 252
M G PDK + ++ CK + +++ M KE+ L + +
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
D D LW F+ D
Sbjct: 395 KHDHADEALW---------FLKD------------------------------------- 408
Query: 313 LSGIMDKSIQLDSAVISTIIEVNC-DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+K ++D S I+ C + R + L E K + Y A++
Sbjct: 409 ---AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 465
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTA 429
+L K ++++ M GH L++ + + + A ++ ++ E +
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSI 525
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
TY+ ++ G +A + + M KG P N+LL L + GR +A + +E
Sbjct: 526 TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 134/324 (41%), Gaps = 23/324 (7%)
Query: 21 QDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
+DL+K + P + T+ +L H ++A L+F ++ +GF D+ Y+ ++
Sbjct: 367 RDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA-LWFLKDAQEKGFRIDKLGYSAIV 425
Query: 74 DIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
+ R+S K + M KG D VTYT+V++ G+VD A + + M
Sbjct: 426 HALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH 485
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P VSYTA + + + EA ++ + PN TY+V+M L R GK EA +
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+ +M G P N+L++ C+ G T + A+ F + F
Sbjct: 546 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 605
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
DE D+ L + + I+ + V TT LV L KK + L
Sbjct: 606 QNDELDAALSVLDDMY---LINKHADVFTYTT-----------LVDTLGKKGRIAEATEL 651
Query: 313 LSGIMDKSIQLDSAVISTIIEVNC 336
+ ++ K I T+I C
Sbjct: 652 MKKMLHKGIDPTPVTYRTVIHRYC 675
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 174/425 (40%), Gaps = 24/425 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM-QEKGINIDAVTYTSVMHWLSNAGDV 117
S+G D+ +Y T++ + KRI ++ + + M +E G+ D VTY +++H L+
Sbjct: 340 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTV 176
D A+ ++ + K + Y+A + L R+ EA D+ EM+ +G PP+ TYT
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 459
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN- 235
++ R G+ ++A ++ M G +P+ + L+ C+ G++ ++ +E+
Sbjct: 460 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 519
Query: 236 --RLALRYPVFKEALQT-FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
++ Y V L+ K+++ D + V F P GP+ I
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP-----------------GPVEI 562
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
+ L+ L + + ++K ++ +T+I C + D AL +
Sbjct: 563 NL-LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 621
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++ + + Y L+ L K + E++++M G +IHR +
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
I + QKC Y +I G ++A + + R T L+ G
Sbjct: 682 DLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEG 741
Query: 473 LEKLG 477
K G
Sbjct: 742 YLKKG 746
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/496 (19%), Positives = 211/496 (42%), Gaps = 30/496 (6%)
Query: 11 ILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHD 65
I K +D L K + +K + YT++ ++ K L F+ + + G+ +
Sbjct: 98 IAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 157
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
T++T+++ R+S + + M E G D +T ++++ L +G A+ + +
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+M C P V+Y + ++ + + A ++ ++M +R + + Y+++++ L + G
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+ A +F++M+ G+ + NILI C AG +LR M + ++ F
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 246 EALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ +F K+ + + +H +P+ I+ T+ I+G
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT-------YTSLIDG-----------FC 379
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K+ +L + ++ ++ K + + +I C R D L F + +
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y LI +L E+ +EM + +L+ L A +IF +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 422 PEDQK--CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ + Y +I +A D A ++ ++ KG+ P + T+N+++ GL K G +
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 480 SDAE-IYRKEKKSIQA 494
S+AE ++RK ++ A
Sbjct: 560 SEAELLFRKMEEDGHA 575
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 163/405 (40%), Gaps = 61/405 (15%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
+ ++ + ++ D + + ++M+LK + + + + ++ A +
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+I+ G PN T++ L+ L G+ EALE+ +M E G +PD N L+ C +G+
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+L++ M E + P +AV +
Sbjct: 209 EAEAMLLIDKMVE---------------------------YGCQP----------NAVTY 231
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
GP VL ++ K A+ LL + +++I+LD+ S II+ C H
Sbjct: 232 ------GP-------VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D A F + Y LIG + A+++ +M K + V ++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 401 LIHRL---GSARRPVPAAK--IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
LI G R K I + D T TYT+LI + DKA ++ M
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPD---TITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK-KSIQADALS 498
KG P++ TFN+L+ G K R+ D E++RK + + AD ++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 13 KYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEK----AWLFFNWVSRSRGFNHD 65
K + D +L + + ++ D+ T N +++ + K LF VSR N
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI- 473
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
TY +LD + +FE +++ + +D Y ++H + NA VD A +++
Sbjct: 474 -VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+ LK P + +Y + L + EA ++++M + G P+ +TY +L+ + G
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIE 214
+++++ +++ G D + ++I+
Sbjct: 593 DATKSVKLIEELKRCGFSVDASTIKMVID 621
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY L+ RI+ + V+E M G + D +TY++++H S A D A ++E M
Sbjct: 194 TYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAM 253
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P V+Y + L + EA +++++M++RG P+ TYT L+ GK
Sbjct: 254 ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKI 313
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE---KCCKAGETRTIILIL 229
E+A+E+F +M G PD A N L++ + K GE R + ++
Sbjct: 314 EQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVM 358
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + D TY+T++ F A++ +FE M +G +AVTY ++H L D
Sbjct: 220 SAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPD 279
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++ +M + C P V+YT + ++++A +V+ EM+ +G P+ Y L+
Sbjct: 280 EAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 339
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
+ RAGK EA ++F M +PD + NI+I+ KA + + M+++
Sbjct: 340 KGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDH 397
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A+ F+ + R D +Y+ ++D F + + + +++ M + + TY
Sbjct: 137 VHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 196
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ ++ L G + A ++EEM C P +++Y+ + L + +A ++++ MI R
Sbjct: 197 AFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR 256
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY L+ L + K +EA E+F KM E G PDK L+ C G+
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316
Query: 226 ILILRYM 232
+ + M
Sbjct: 317 VEVFDEM 323
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 6 SNVYKILKYSTWDSAQDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR 58
S + ++ K DSA LL+ + + S +N++ K +++A F ++R
Sbjct: 54 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKA-DKIQEAQEFLQGMNR 112
Query: 59 SRGFNHDR-FTYTTMLDIFGEAKRISSMKYVFELM-QEKGINIDAVTYTSVMHWLSNAGD 116
+ F+Y ++L+ +AK++ +F M E+ + D V+Y+ ++ +
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A ++++M C P + +Y A++ L R+ +A VY+EMI G P+ TY+
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ A K+++A E+F M G +P+ N L+ CK + + R M E
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 18 DSAQDLLKNL---PIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYT 70
D A +L + + + ++ T N +L K P E LF V R G + D+ TYT
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER--GCDPDKVTYT 301
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T+L F +I VF+ M KG + D V Y ++ AG A +++ M +
Sbjct: 302 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ-RGLPPNCYTYTVLMEYLVRAGKYEE 189
EC P VS+ + L R+ +A +V++ M Q G P+ TY L+ L + E
Sbjct: 362 ECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSE 421
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
A+++F ++ + PD A N+L+E AG
Sbjct: 422 AMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 28/390 (7%)
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
T SV+ L AG VD A+++ E M + P + +++ + L D+++EA + + M
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
Query: 163 IQ--RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCCKA 219
+ +C++Y L+ L +A K +A IFS M E V PD + +ILI+ CK
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170
Query: 220 GE-TRTIILILRYMKENRL--ALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISD 275
E R L + + N + Y F L + ++AD + SP+ I+
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT- 229
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+T I G L +K+ A + L ++ + + ++ + ++
Sbjct: 230 ------YSTLIHG----------FSLARKHDQAHE-LFEAMISRGCRPNAVTYNCLLHGL 272
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C + D A F V+ + ++ Y L+ + + E+ +EM GH V
Sbjct: 273 CKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDV 332
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLL--PEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
L+ A +P A ++F ++ E + T ++ +I A D A+++++
Sbjct: 333 VAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFER 392
Query: 454 MCR-KGIHPSLGTFNVLLAGLEKLGRVSDA 482
M + G P L T+N L+ GL R+S+A
Sbjct: 393 MEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 131/330 (39%), Gaps = 26/330 (7%)
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE---AGVQPDKAACNILIEKCCKA 219
++ P N +T + L ++GK E+A E MQE + P C+ +I++ CKA
Sbjct: 3 VESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKA 62
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G + + +L M + + AD+ Q + EF+ +
Sbjct: 63 GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADK---------IQEAQEFLQGMNRT 113
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC--D 337
++T S + L + KK A + + ++S+ D S +I+ C D
Sbjct: 114 --ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKID 171
Query: 338 HRRRDGALLAFEYSVKMDLNL--ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R L Y +DLN T Y A + L++ + EEM AG S V
Sbjct: 172 ELGRAEKL----YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDV 227
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYK 452
+ LIH AR+ A ++F + + C TY L+ D+A ++++
Sbjct: 228 ITYSTLIHGFSLARKHDQAHELFEAMI-SRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 286
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M +G P T+ LL G +G++ A
Sbjct: 287 KMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 169/412 (41%), Gaps = 70/412 (16%)
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPP------NCYTYTVLMEYLVRAGKYEEA 190
V++TA++ L + ++++A + + M + C++ +++ L +AG+ + A
Sbjct: 12 VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHS---VIQELCKAGRVDSA 68
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
L + M + G PD A ++LI + CKA + + L+ M NR + A
Sbjct: 69 LSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM--NR-----TISTRASSC 121
Query: 251 FKVADENDSLL--WQVHPQFS--PEFISDNDAVEFVTTD---IEGPLSIDQ-GLVLILLK 302
F +SL +VH F+ +S+ V V + I+G ID+ G L K
Sbjct: 122 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYK 181
Query: 303 K-------KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ N+ ++ L+G+M K D+ + +E +
Sbjct: 182 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV-------------------YEEMISAG 222
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ + Y LI + E+ E M G L+H L +P A
Sbjct: 223 CSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAH 282
Query: 416 KIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
++F + E + C TYT L+ + + G ++A++++ M KG P + +N LL G
Sbjct: 283 ELFRKMVE-RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 341
Query: 473 LEKLGRVSDAE------IYRKEK-----KSIQADALSK-----DAVPMEEKI 508
+ G+ +A + R+ K +I D LSK DAV + E++
Sbjct: 342 FFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 144/334 (43%), Gaps = 16/334 (4%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R D Y+ ++D + + + +F M+ KG D +TY +++ NAG D
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +M ++ P +V+++ + +++EA + KEM+QRG+ PN TY L++
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ + EEA+++ M G PD NILI CKA + + R M +
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ +Q F + + +V + E +S + V+ I D G +
Sbjct: 437 NTVTYNTLVQGFCQSGK-----LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 300 LLKKKNLVAIDSLLSGIMDKS-IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
L+ + G ++KS ++LD + II C+ + D A F + L
Sbjct: 492 ALE----------IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
+ AY +I L + ++ K + +MT+ GH+
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 175/437 (40%), Gaps = 54/437 (12%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM---QEKGINIDAVTYTSVMHWLSNAG 115
S+G H +T + M++ F +++S Y F M + G D V + ++++ L
Sbjct: 116 SKGIAHSIYTLSIMINCFCRCRKLS---YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
V A+ + + M PT+++ + L LN +V +A + M++ G PN TY
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
++ + ++G+ A+E+ KM+E ++ D +I+I+ CK G + M+
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + F A W + + I + VT +
Sbjct: 293 GFKADIITYNTLIGGFCNAGR-----WDDGAKLLRDMIKRKISPNVVTFSV--------- 338
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L+ +K+ L D LL +M + I ++ +++I+ C R + A+ + +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
+ + + LI K N E+ EM+ G V A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRG---------------------VIAN 437
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
T TY L+ + +G + A K+++ M + + P + ++ +LL GL
Sbjct: 438 ------------TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 476 LGRVSDA-EIYRKEKKS 491
G + A EI+ K +KS
Sbjct: 486 NGELEKALEIFGKIEKS 502
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 77/154 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + TY T++ F ++ ++ K +F+ M + + D V+Y ++ L + G+++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+ +++ + I Y + + +V +A D++ + +G+ + Y +++
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
L R +A +F KM E G PD+ NILI
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 70/155 (45%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SR D +Y +LD + + +F +++ + +D Y ++H + NA VD
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + LK +Y + L D + +A ++++M + G P+ TY +L+
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+ A E+ +M+ +G D + ++I
Sbjct: 586 RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V G + TY+T++D + + + K +F M + +N +Y +++ L
Sbjct: 367 VMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGK 426
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
VD A+N+ EM K P V+Y + + L + R+ A D+ KE+ RG P + TYT
Sbjct: 427 SVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYT 486
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
L++ L + ++A+ +F KM+E G+QP+K LI+ CK +
Sbjct: 487 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLK 534
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 172/419 (41%), Gaps = 26/419 (6%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
K L F+ ++GF ++ +Y T+L+ + + +++++ D V Y ++
Sbjct: 219 KKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTI 278
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L V+ A + + EM + +P +++Y+ + L ++ A + EM + +
Sbjct: 279 IDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNI 338
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ YTYT+L++ L + GK +EA + M + GV+P+ + L++ C GE
Sbjct: 339 NPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQ 398
Query: 228 ILRYMKE---NRLALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVT 283
I M + N Y + L K DE +LL + +H P ++ N ++
Sbjct: 399 IFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDG-- 456
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
L K + + L+ + + D +++++ C ++ D
Sbjct: 457 ----------------LCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDK 500
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A+ F + + + Y ALI L K ++ + + G + VY ++I
Sbjct: 501 AIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIG 560
Query: 404 RLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
L A + S + ED C T+ +I F DKA K+ M KG+
Sbjct: 561 GLCKEGMLDEALAMKSKM-EDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 176/447 (39%), Gaps = 54/447 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ + TT++ + + + + +G ++ V+Y ++++ L G+ A
Sbjct: 197 GYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCA 256
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++ + P +V Y + L + V EA D Y EM RG+ P+ TY+ L+
Sbjct: 257 IKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICG 316
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
AG+ A + ++M + PD ILI+ CK G+ + +L M + +
Sbjct: 317 FCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV--- 373
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
K + T+ + L+ +VH + V T++ + ++ L
Sbjct: 374 ----KPNVVTYSTLMDGYCLVGEVHN-------AKQIFHAMVQTEVNPSVCSYNIMINGL 422
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K K++ +LL ++ K++ ++ +++I+ C R AL
Sbjct: 423 CKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL--------------- 467
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
++++E+ G V L+ L + A +F
Sbjct: 468 --------------------DLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMK 507
Query: 421 LPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+ E Q TYTALI A K+++ + KG + T+NV++ GL K G
Sbjct: 508 MKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGM 567
Query: 479 VSDAEIYRKEKKSIQADALSKDAVPME 505
+ +A K ++ + DAV E
Sbjct: 568 LDEA---LAMKSKMEDNGCIPDAVTFE 591
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 162/390 (41%), Gaps = 29/390 (7%)
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+++ ++M++K P +V+ + + ++ + V ++++ G PN T LM+
Sbjct: 151 AISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMK 210
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
L G+ +++L K+ G Q ++ + L+ CK GETR I +LR +++
Sbjct: 211 GLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRP 270
Query: 238 -ALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAV---------------- 279
+ Y + L K+ +E +++ + P+ I+ + +
Sbjct: 271 DVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLL 330
Query: 280 -EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
E +I + L+ L K+ L +LL + + ++ + ST+++ C
Sbjct: 331 NEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLV 390
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
A F V+ ++N +Y +I L K + + ++ EM
Sbjct: 391 GEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTY 450
Query: 399 ALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
LI L + R A + L P D TYT+L+ + DKA+ ++
Sbjct: 451 NSLIDGLCKSGRITSALDLMKELHHRGQPAD---VITYTSLLDGLCKNQNLDKAIALFMK 507
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
M +GI P+ T+ L+ GL K R+ +A+
Sbjct: 508 MKERGIQPNKYTYTALIDGLCKGARLKNAQ 537
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 11 ILKYSTWDSAQDLLKNL-----PIKWDSYT-VNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
+ K SA DL+K L P +YT + L + ++KA F + + RG
Sbjct: 457 LCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKM-KERGIQP 515
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+++TYT ++D + R+ + + +F+ + KG ID TY ++ L G +D A+ +
Sbjct: 516 NKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMK 575
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+M+ C P V++ ++ LF D +A + EMI +GL
Sbjct: 576 SKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 167/437 (38%), Gaps = 23/437 (5%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D T + +++ F +++ V + + G + + T++M L G+V
Sbjct: 161 KGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKK 220
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+++ +++ + VSY + L + A + + + R P+ Y +++
Sbjct: 221 SLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIID 280
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
L + EA + +++M G+ PD + LI C AG+ +L M +
Sbjct: 281 GLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINP 340
Query: 238 -ALRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVE--------------- 280
Y + +AL + K+ + + L P ++ + ++
Sbjct: 341 DVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIF 400
Query: 281 --FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
V T++ + ++ L K K++ +LL ++ K++ ++ +++I+ C
Sbjct: 401 HAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKS 460
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R AL + + Y +L+ L K K + +M + G Y
Sbjct: 461 GRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 520
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCR 456
LI L R A K+F + C TY +IG G D+AL + M
Sbjct: 521 TALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMED 580
Query: 457 KGIHPSLGTFNVLLAGL 473
G P TF +++ L
Sbjct: 581 NGCIPDAVTFEIIIRSL 597
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 136/345 (39%), Gaps = 50/345 (14%)
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+G+ PN T ++L+ L G+ + + K+ + G QP+ L++ GETR
Sbjct: 5 KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMK-----GETRC 59
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHP-QFSPEFISDNDAVEFVT 283
I + R M E+R + R ++ + + + + L P F + S +D V
Sbjct: 60 AIKLPR-MIEDR-STRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAV 117
Query: 284 TDIEG-------PLSIDQGLVL-ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ G P I+ G +L L+K K+ SL + K I+ D +S +I
Sbjct: 118 SQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCF 177
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH---- 391
C + +AF +SV L + L I L T K + E+ K+ H
Sbjct: 178 CHLGQ-----MAFSFSV-----LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDK 227
Query: 392 -----------SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGV 437
S G L L ++G R A K+ ++ ED+ Y +I
Sbjct: 228 VVAQGFQMNQVSYGTLLNGLC--KIGETR---CAIKLLRMI-EDRSTRPDVVMYNTIIDG 281
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++A Y M +GI P + T++ L+ G G++ A
Sbjct: 282 LCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FF W +NH +Y +L++ ++ R + + M G + TY ++ L
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSL 62
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
A + A +++ M + C P + SY+ + L +V EA ++ EMI G PN
Sbjct: 63 CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
TY L+ L + GK +EA+++FS+M G PD N+LI+ K G+
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 141/348 (40%), Gaps = 20/348 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + TY ++L + ++ +F M +G D V Y ++ S GD+ A
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++EEM K C PT+ +Y + + ++K+M+++G PN +T+ L++
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
+ G EA +F +M+ G PD + N LI C G+ +LR M + +
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ Y + + D L +++ P+ + DA + T ++
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEI-----PKSGLEPDAFSYST------------II 339
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L + + A + ++ D+AV+ ++ C R + F+ VK +
Sbjct: 340 DCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECV 399
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
Y L+ L K V EI E+T+ G S V + +++ L
Sbjct: 400 PLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 161/382 (42%), Gaps = 25/382 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ +TY +L +A+R + VF M +G + + +Y+ ++ L VD A +
Sbjct: 51 NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL 110
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM P +V+Y + + L ++KEA D++ M+ RG PP+ Y VL++ +
Sbjct: 111 NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G EA +F +M E G P N L+ + GE + + + M F
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230
Query: 245 KEALQTF-KVAD--ENDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
L F K+ D E L ++ P+ +S N + + + +G Q L+ +
Sbjct: 231 NNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCS--KGKPHEAQRLLREM 288
Query: 301 LKK---KNLVAIDSLL-----SGIMDKSIQL-----------DSAVISTIIEVNCDHRRR 341
++ ++V+ + L+ SG +D +I+L D+ STII+ C +
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
A + F+ + + + L+ L + + E+ + M K + LL
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLL 408
Query: 402 IHRLGSARRPVPAAKIFSLLPE 423
+++L A+R +IF L E
Sbjct: 409 MYKLCKAKRSDDVCEIFHELTE 430
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%)
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
N ++Y ++ L+ +G D + +M C P +Y ++ L R +EA
Sbjct: 14 NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
V++ M +G PN ++Y++L+ L R K +EA E+ ++M + G QP+ L+ C
Sbjct: 74 VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133
Query: 218 KAGETRTIILILRYM 232
K G+ + + + M
Sbjct: 134 KMGKLKEAVDLFSRM 148
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 6/230 (2%)
Query: 34 YTVNQVLKTHPPM----EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
+T N +L M E LF RS G D +Y T++ + + +
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEM--RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
M G+ D V+Y ++ S +G +D A+ ++ E+ P SY+ + L
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+V A V+K+MI G P+ L+ L R + E+ E+F M + P
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
N+L+ K CKA + + I + E + + K L+T + +D+ D+
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDA 455
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 131/373 (35%), Gaps = 59/373 (15%)
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+SY +++L + R Y +M+ G PN YTY L+ L +A ++EEA +F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
M G P+ Y + L + DE
Sbjct: 78 MAAQGCSPN--------------------------------VFSYSILIAGLCRGQKVDE 105
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI 316
LL E I VT L+ L K L L S +
Sbjct: 106 AAELL--------NEMIDGGHQPNVVTYG---------SLLSGLCKMGKLKEAVDLFSRM 148
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+ + D V + +I+ A FE ++ Y +L+ + F
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF----SL-LPEDQKCTATY 431
+V + ++M + G ++ L+ V A ++F SL P D +Y
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD---VVSY 265
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA--EIYRKEK 489
LI S G +A ++ + M R G+ P + ++N+L+ G K G + A Y K
Sbjct: 266 NTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPK 325
Query: 490 KSIQADALSKDAV 502
++ DA S +
Sbjct: 326 SGLEPDAFSYSTI 338
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 151/394 (38%), Gaps = 47/394 (11%)
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+++ KG +D+ V+ + G VD V + ++ C P IVSY A +K L +
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
R + ++ EM++ G PPN T+ L+ YL R G +E+ E S+M E G PD
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
+I+ CK G IL M L + L+ A+ W+
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER-----WEEAEDL 340
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
E ++ ++ VT +I GLV +++ LL +++ D
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIE---------LLEQMLEHGCIPDVITY 391
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+T+I C D A++ + +Y ++ L + + E++ M +
Sbjct: 392 TTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQ 451
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKAL 448
G LP T+ LI G ++A+
Sbjct: 452 QG-----------------------------CLPN----PVTFNTLINFMCKKGLVEQAI 478
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ K M G P L +++ ++ GL K G+ +A
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 512
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 17/233 (7%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEK--------AWLFFNWVSRS 59
I K + A D+L +P +K + N VLK E+ A +F
Sbjct: 293 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF------Q 346
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
D T+ ++D F + + + + E M E G D +TYT+V++ G VD
Sbjct: 347 EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDE 406
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV + + M C P +SYT +K L +R +A ++ MIQ+G PN T+ L+
Sbjct: 407 AVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLIN 466
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
++ + G E+A+E+ +M G PD + + +I+ KAG+T + +L M
Sbjct: 467 FMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 519
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +YT +L A+R + + M ++G + VT+ ++++++ G V+ A
Sbjct: 418 GCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQA 477
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++M + C P ++SY+ + L + +EA ++ MI +G+ PN Y+ +
Sbjct: 478 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASA 537
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L R G+ ++ +++F +Q+A V+ D A N +I CK ET I YM N
Sbjct: 538 LSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN 592
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 126/313 (40%), Gaps = 22/313 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + Y T+L A+R + + M ++ +D VT+ ++ + G VD
Sbjct: 311 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 370
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ + E+M C P +++YT + V EA + K M G PN +YT+++
Sbjct: 371 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 430
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L RA ++ +A E+ S M + G P+ N LI CK G I +L+ M N +
Sbjct: 431 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCS 490
Query: 239 ---LRYPVFKEALQTFKVADENDSLL-WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y + L +E LL ++ +P I I
Sbjct: 491 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTI------------------IYS 532
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
+ L ++ I + I D +++ D+A+ + +I C D A+ F Y V
Sbjct: 533 SMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN 592
Query: 355 DLNLERTAYLALI 367
+ Y LI
Sbjct: 593 GCMPNESTYTILI 605
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 168/445 (37%), Gaps = 30/445 (6%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D +Y +L AKR ++ + M G + T+ +++ +L G +
Sbjct: 206 SFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFE 265
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+M C P + Y + + + + A D+ M GL PN Y ++
Sbjct: 266 QVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVL 325
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ L A ++EEA ++ ++M + D NIL++ C+ G +I +L M E+
Sbjct: 326 KGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCI 385
Query: 239 LRYPVFKEALQTF---KVADENDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + F + DE LL + P IS T ++G
Sbjct: 386 PDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTIS-------YTIVLKG------ 432
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L + + V L+S ++ + + +T+I C + A+ + +
Sbjct: 433 -----LCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVN 487
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + +Y +I L K + E++ M G + + + + L R
Sbjct: 488 GCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR---T 544
Query: 415 AKIFSLLPEDQKCT-----ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
KI + Q T A Y A+I D+A+ + M G P+ T+ +L
Sbjct: 545 DKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTIL 604
Query: 470 LAGLEKLGRVSDAEIYRKEKKSIQA 494
+ GL G V +A+ E S +A
Sbjct: 605 IRGLASEGLVREAQDLLSELCSRRA 629
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 132/346 (38%), Gaps = 35/346 (10%)
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+PPN YTY ++ L G +AL + +M G C++++E C+ G R+ +
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 227 LILRYMKENRLAL---RYPVFKEALQTFKVADENDSLLWQVHPQFS--PEFISDNDA--- 278
L+ + L + A+ DE LL ++ P F P+ +S N
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKL-PSFGCEPDIVSYNAVLKG 222
Query: 279 --------------VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
VE V ++ L+ L + + LS + + D
Sbjct: 223 LCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPD 282
Query: 325 SAVISTIIEVNC--DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+ +TII+ C H +L+ S + N+ Y ++ L + + ++
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNV--VCYNTVLKGLCSAERWEEAEDL 340
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE--DQKCTA---TYTALIGV 437
+ EM + L +L+ ++ LL + + C TYT +I
Sbjct: 341 LAEMFQEDCPLDDVTFNILVDFFCQNGL---VDRVIELLEQMLEHGCIPDVITYTTVING 397
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ G D+A+ + K M G P+ ++ ++L GL + R DA+
Sbjct: 398 FCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQ 443
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 182/462 (39%), Gaps = 66/462 (14%)
Query: 27 LPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNH-DRFTYTTMLDIFGEAKRIS 83
+P+ D+YT N VLK K W + R R H + T+ T + F + +
Sbjct: 1 MPVAPDTYTYNTVLKGLC-CAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLD 59
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ E M + G D + Y+++++ S G VD A+ + M C P V Y A +
Sbjct: 60 RAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAAL 116
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K L + R +E ++ EM+++ PPN T++ L+ L + E A+E+ +MQ+ G
Sbjct: 117 KGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYM 176
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD + N +I C + + R +AL+ K S+L +
Sbjct: 177 PDVVSYNTIIS--CFSDQARA--------------------DDALKLLK------SMLCK 208
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
P+ IS N ++ L K K L++ ++ K ++
Sbjct: 209 ------PDTISFN------------------AVLKCLCKAKRWYDAVELVAKMLKKDCRI 244
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
+ + +I+ C + + A+ FE K + Y +LI + ++
Sbjct: 245 NEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLF 304
Query: 384 EEMTKAGHSL---GVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFS 440
M G + R A + LP + T+ LI
Sbjct: 305 RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNE----VTFNILISSLCQ 360
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G ++A+ +Y+ M + GI P + T+N L+ G + GR+ DA
Sbjct: 361 KGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 402
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDI 75
D A LLK++ K D+ + N VLK ++ + V++ + + T+ ++D
Sbjct: 196 DDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDS 255
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ ++ VFELM + D VTY+S+++ S G + A +++ M C
Sbjct: 256 LCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRAD 312
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
I SY A +K L + R +A ++ +M+ PN T+ +L+ L + G A++++
Sbjct: 313 IFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYE 372
Query: 196 KMQEAGVQPDKAACNILI 213
+M + G+ PD N LI
Sbjct: 373 QMPKYGITPDIFTYNALI 390
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAW-----LFFNWVSRSRGFNHDRFTYTTMLD 74
A DL +++P + D ++ N LK M W L + V+ N T+ ++
Sbjct: 300 AFDLFRSMPCRADIFSYNATLKGLC-MAARWDDAGELIADMVTEDCLPNE--VTFNILIS 356
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ ++ V+E M + GI D TY ++++ S G +D A+ M C P
Sbjct: 357 SLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEP 413
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
+SY + +K L +R K+A + EM+++ PN T+
Sbjct: 414 DTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 194/472 (41%), Gaps = 60/472 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D +TY M+D + KR + + + M+E + D +Y +++H G ++ A
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLA 353
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE------------------- 161
+ I+ +M + P++ +YTA + N R EA V E
Sbjct: 354 IYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILK 413
Query: 162 -MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
M+ G+ P+ TY+ L+ + + G E EI S+MQ++GV P+ L+ CKAG
Sbjct: 414 CMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAG 473
Query: 221 ETRTII--------------------LILRYMKENRLALRYPVFKEALQ----TFKVADE 256
+ + L+ + +E +A FK+ + +F VA
Sbjct: 474 HAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA-EAEQFKQYMSRMKISFDVASF 532
Query: 257 N---DSLLWQ--VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
N DS + V FS + DN DI S+ +GL + +LV
Sbjct: 533 NCIIDSYCQRGNVLEAFS---VYDNMVRHGWPPDICTYGSLLRGLC----QGGHLVQAKE 585
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+ +++K+ +D ++T++ C H D AL E V ++ + Y L+
Sbjct: 586 FMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFC 645
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA-- 429
K +++ M + G L++ L + + A+ +F + + A
Sbjct: 646 KRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADC 705
Query: 430 -TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
Y +++ Y G ++ ++ + M ++PS ++N+L+ G K G++S
Sbjct: 706 IAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLS 757
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 11 ILKYSTWDSAQDLLKNL---PIKWDSYTVNQVLKTHPPMEK--AWLFFNWVSRSRGFNHD 65
I K+ T D A DL + + I D+YT +L K L + +G D
Sbjct: 609 ICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPD 668
Query: 66 RFTYTTMLDIFGEAKRISSMKYVF-ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
YT +L+ ++ + Y+F E++ ++G+ D + Y S+M+ G ++ +
Sbjct: 669 TIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLM 728
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M E YP+ SY M ++ +Y++M++ G+ P+ TY +L+ L
Sbjct: 729 RNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEY 788
Query: 185 GKYEEALEIFSKM--QEAGVQPDKAACNILIEKCCKAGE 221
G E A++ KM +E+G+QP LI C+ G+
Sbjct: 789 GLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGD 827
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 92/470 (19%), Positives = 183/470 (38%), Gaps = 27/470 (5%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPP----MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
+ + I +D + N ++ ++ +E ++ N V G+ D TY ++L +
Sbjct: 520 MSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRH--GWPPDICTYGSLLRGLCQG 577
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ K + EK ID T +++ + G +D A+++ E+M + P +Y
Sbjct: 578 GHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTY 637
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK-MQ 198
T + ++ A + + M+++GL P+ YT L+ LV G+ + A +F + +
Sbjct: 638 TILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIIC 697
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
+ G+ D A N ++ K G+ I ++R M EN + + + + +
Sbjct: 698 KEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLS 757
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
L+ DN + + + GL+ I +K + ++ SG+
Sbjct: 758 RTLYLYRDMVKEGIKPDNVTYRLLIFGL-----CEYGLIEIAVKFLEKMVLEE--SGLQP 810
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
K + +I C DGA E + + A +++ L K +
Sbjct: 811 KHTHYIA-----LINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 865
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYTA 433
+ + +AG + L+H L + A + L+ + C TY
Sbjct: 866 AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLM---ESCGLKVDVVTYNV 922
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI + AL +Y+ M KG+ P++ T+ L + G + D E
Sbjct: 923 LITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGE 972
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 21 QDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
+ L + P+ D T N VL T + KA + R N TY T+L+ +
Sbjct: 220 ESLDRKFPL--DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPN--AVTYNTILNWYV 275
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ R S + + M++ GI D TY ++ L A + + M+ P
Sbjct: 276 KKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDEC 335
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
SY + F ++ A ++ +M+++ L P+ TYT L++ R G+ +EA + +M
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM 395
Query: 198 QEAGVQPDKAACNILIEKC 216
Q GV+P + + I KC
Sbjct: 396 QITGVRPREVSKAKQILKC 414
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 5/196 (2%)
Query: 30 KWDSYTVNQVLKTHPPMEKA---WLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMK 86
K ++ N +L + K+ WLF S R F D T +L+ ++S +
Sbjct: 192 KASLFSCNNILNALVGINKSEYVWLFLKE-SLDRKFPLDVTTCNIVLNSLCTQGKLSKAE 250
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+ + M+ + +AVTY ++++W G A+ I ++M+ + +Y + L
Sbjct: 251 SMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL 309
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
R A + K M + L P+ +Y L+ GK A+ IF++M ++P
Sbjct: 310 CKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSV 369
Query: 207 AACNILIEKCCKAGET 222
A LI+ C+ G T
Sbjct: 370 ATYTALIDGYCRNGRT 385
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 78/444 (17%), Positives = 174/444 (39%), Gaps = 26/444 (5%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
++A +F + RS G + + +L F I+ + + M I+ D ++
Sbjct: 476 KEALKYFVDIYRS-GLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNC 534
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ G+V A ++++ M P I +Y + ++ L + +A + ++++
Sbjct: 535 IIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKA 594
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
+ T L+ + + G +EAL++ KM + PD IL++ CK G+ +
Sbjct: 595 CAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPAL 654
Query: 227 LILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDI 286
++L+ M E L + L + L+ + + + + E + D
Sbjct: 655 ILLQMMLEKGLVPDTIAYTCLL---------NGLVNEGQVKAASYMFQEIICKEGLYADC 705
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
S+ G LK + I+ L+ + + + SA + ++ + L
Sbjct: 706 IAYNSMMNG----YLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLY 761
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT--------KAGHSLGVYLG 398
+ VK + + Y LI L + + +E+M K H + +
Sbjct: 762 LYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINA 821
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+ + A K ++P + ++++ G ++A+ ++ ++ R G
Sbjct: 822 KCRVGDIDGAFELKEDMKALGVVPSE----VAESSIVRGLCKCGKVEEAIIVFSSIMRAG 877
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDA 482
+ P++ TF L+ GL K ++ DA
Sbjct: 878 MVPTIATFTTLMHGLCKEFKIDDA 901
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A + F+ + R+ G T+TT++ + +I ++ +LM+ G+ +D VTY
Sbjct: 863 VEEAIIVFSSIMRA-GMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 921
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L N + A++++EEMK K P I +Y ++ +++ + K++ R
Sbjct: 922 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 981
Query: 166 GLPPN 170
G+ P+
Sbjct: 982 GIVPS 986
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 88/474 (18%), Positives = 177/474 (37%), Gaps = 58/474 (12%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDV 117
GF F+ +L+ I+ +YV+ ++E + +D T V++ L G +
Sbjct: 190 GFKASLFSCNNILNAL---VGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKL 246
Query: 118 DGAVNIWEEMKLKEC-YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
A ++ + K+K C P V+Y + R K A + +M + G+ + YTY +
Sbjct: 247 SKAESMLQ--KMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNI 304
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
+++ L + + A + +M+E + PD+ + N LI G+ I I M
Sbjct: 305 MIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQS 364
Query: 237 LALRYPVFKEALQTF---KVADENDSLLWQVH-PQFSPEFISDNDAV--EFVTTDIEGPL 290
L + + + DE +L+++ P +S + + I+ +
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDV 424
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF-- 348
L+ + K + +LS + + ++ + +T++ C AL F
Sbjct: 425 ITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 484
Query: 349 ---------------------------------EYSVKMDLNLERTAYLALIGILIKLNT 375
+Y +M ++ + ++ +I +
Sbjct: 485 IYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGN 544
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE-----DQKCTAT 430
+ + + M + G + L+ L V A + L E D+K
Sbjct: 545 VLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEK--TL 602
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
T L+G+ G+ D+AL + + M + I P T+ +LL G K G++ A I
Sbjct: 603 NTLLVGI-CKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALI 655
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF + G+ T+T++MH L +D A ++ + M+ +V+Y + L
Sbjct: 869 VFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLC 928
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
+ +A D+Y+EM +GL PN TY L + G ++ ++ +++ G+ P
Sbjct: 929 NKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 985
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FT+ ++D + R+S + +E M + ++ D VTY+ +++ L +D A ++
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M K C+P +V+Y+ + + +V+ ++ EM QRG+ N TYT+L++ RA
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
GK A EIF +M GV P+ N+L+ C G+ ++IL M++N
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ + Y T++D ++K++ + + M++ GI D VTY S++ L ++G A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ M +E YP + ++ A + RV EA + Y+EMI+R L P+ TY++L+
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L + +EA E+F M G PD +ILI CK+
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWD-------SYTVNQVLKTHPPMEKAWLFFNWVSRSR 60
+Y + YS D A+++ + K S +N K+ +E F +S+ R
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK-VEHGMKLFCEMSQ-R 355
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + TYT ++ + A +++ + +F M G++ + +TY ++H L + G ++ A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ I +M+ IV+Y ++ + V +A D+Y + +GL P+ +TYT +M
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKA 207
L + G EA +F KM+E G+ P++
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPNEC 502
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 171/425 (40%), Gaps = 17/425 (4%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
++ +L + K+ + Y++E MQ GI + T +++ + A++ +M
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P+IV++ + + DRV +A ++ +M+ G PN Y +++ L ++ + +
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
AL++ ++M++ G+ PD N LI C +G ++ M + + YP
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI---YP------ 254
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
F D+ + + + EF E + ++ + L+ L L
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYE-----EMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+ + ++ K D S +I C ++ + + F + + Y LI
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QK 426
+ EI M G + +L+H L + A I + + ++
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE-IY 485
TY +I AG A IY ++ +G+ P + T+ ++ GL K G +A+ ++
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 486 RKEKK 490
RK K+
Sbjct: 490 RKMKE 494
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 90/177 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G D TY+ +++ + ++K++ +F M ++G+ + VTYT ++ AG ++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A I+ M +P I++Y + L N ++++A + +M + G+ + TY +++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ +AG+ +A +I+ + G+ PD ++ K G R + R MKE+
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
+S + K+ KY + ++ L I + T N +L + L +++ + H
Sbjct: 88 LSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH 147
Query: 65 DR--FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ T+ ++L+ F R+ Y+F+ M G + V Y +++ L + VD A++
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M+ P +V+Y + + L + R +AT + M +R + P+ +T+ L++ V
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ G+ EA E + +M + PD ++LI C
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 159/381 (41%), Gaps = 33/381 (8%)
Query: 151 RVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
++ ++ D++ M+Q P+ ++ L+ + + KY+ + ++ +MQ G+ + CN
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ----VHP 266
IL+ C+ + + L M + F L F D L+ V
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN-----LVAIDSLLSGIMD--- 318
+ P + N ++ + + +D L L+ +K+ +V +SL+SG+
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQ----VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 319 -------------KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+ I D + +I+ R A +E ++ L+ + Y
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ 425
LI L + + E+ M G V ++LI+ +++ K+F + +
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 426 --KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ T TYT LI Y AG + A +I++ M G+HP++ T+NVLL GL G++ A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 484 IYRK--EKKSIQADALSKDAV 502
+ +K + AD ++ + +
Sbjct: 417 VILADMQKNGMDADIVTYNII 437
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D Y T+ G+ K+IS + ++E M++ G D TY ++ AG VD
Sbjct: 447 KGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDE 506
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+EE++ + P SY + + L N + EA +KEM ++GL P+ TY+ L+E
Sbjct: 507 AIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLIE 566
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL-- 237
+ K E A +F +M G P+ NIL++ ++G T + + +K+ L
Sbjct: 567 CFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLIP 626
Query: 238 -ALRYPVFKE----ALQTFKVADENDSLLWQVHP 266
++ Y V + + +V +N W V P
Sbjct: 627 DSITYSVLARLQSGSHRKVRVRKQNPITGWVVSP 660
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 205/503 (40%), Gaps = 61/503 (12%)
Query: 21 QDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWV-SRSRGFNHDRFTYTTML------ 73
Q+ L L I +++LK+ A FF++ S S F+HD FTY+ ++
Sbjct: 95 QNYLSALSISLTPNEASEILKSLNSPSLALRFFHFCPSLSPNFHHDCFTYSRIILILSKS 154
Query: 74 ---DIFGEAKRISS--------------------------MKYVFELMQEKGINIDAVTY 104
D F A+ I S ++ L+++ G+ + TY
Sbjct: 155 NLPDRFHLARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCIGLIKKWGLRMTGYTY 214
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++ + + + ++ EMK K I ++ + L + V A V+++M +
Sbjct: 215 KCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKR 274
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+ P+ YTYT+++ + GK +E+LE+F +M G P+ A N +I+ A
Sbjct: 275 KHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDK 334
Query: 225 IILILRYM--KENRLA-LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
IL+ M KE R + Y V L T + + D ++ + S +++S
Sbjct: 335 AILLFLKMVEKECRPSEFTYSVILHLLATERKLHKLDEVV-----EVSKKYMSR------ 383
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
SI LV L K + L + + + D +++E C +
Sbjct: 384 ---------SIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKT 434
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
A+ + ++++ Y + L KL + ++ E+M + G + +L
Sbjct: 435 TEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNIL 494
Query: 402 IHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
I G A + A KIF L + + T +Y +LI G D+A +K MC KG+
Sbjct: 495 ISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGL 554
Query: 460 HPSLGTFNVLLAGLEKLGRVSDA 482
+P + T++ L+ K +V A
Sbjct: 555 NPDVVTYSTLIECFGKTDKVEMA 577
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 109/514 (21%), Positives = 200/514 (38%), Gaps = 99/514 (19%)
Query: 1 MRDTISNVYKILKYSTWDSAQDLLKNLPI--KWD----SYTVNQVLKTH---PPMEKAWL 51
+R +IS V ++ + +++++DL K + + KW YT +++ + EK +
Sbjct: 175 VRGSISTVNILIGF--YENSEDLQKCIGLIKKWGLRMTGYTYKCLVQAYLRSRNTEKGFA 232
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+ + + +G D F + +LD + + VFE M+ K D TYT ++
Sbjct: 233 VYLEMKK-KGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMT 291
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
G D ++ ++EEM K P +++Y ++ L V +A ++ +M+++ P+
Sbjct: 292 GKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSE 351
Query: 172 YTYTVLME----------------------------YLVRA----GKYEEALEIFSKMQE 199
+TY+V++ YLVR G EA +F M
Sbjct: 352 FTYSVILHLLATERKLHKLDEVVEVSKKYMSRSIYAYLVRTLKKLGHASEAHRLFCNMWN 411
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
+ D+ AC ++E C AG+T I +L + E +++ ++
Sbjct: 412 CHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSAL-------G 464
Query: 260 LLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
L Q+ P +D E + D GPL D+ I+
Sbjct: 465 KLKQISPL--------HDLYEKMKQD--GPLP------------------DTFTYNILIS 496
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
S V D A+ FE D + +Y +LI L K +
Sbjct: 497 SFGRAGKV--------------DEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEA 542
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLLPEDQKC---TATYTALI 435
+EM + G + V + LI G + A ++F +L E C TY L+
Sbjct: 543 HMKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEG--CYPNIVTYNILL 600
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
+G +A+ +Y + ++G+ P T++VL
Sbjct: 601 DCLERSGRTAEAVDLYAKLKQQGLIPDSITYSVL 634
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 188/445 (42%), Gaps = 51/445 (11%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + F Y ++ + KR+ + +F+ M ++ + + +TY +++ G ++ A
Sbjct: 212 GVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEA 271
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
NI E MK++ PTI+++ + + L ++EA V +EM G P+ +TYT L +
Sbjct: 272 FNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDG 331
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
++ G + ++ + + GVQ C+IL+ CK G +L+ EN LA
Sbjct: 332 HLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPV 391
Query: 241 YPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
F + + +V D N + I +AV + LV
Sbjct: 392 GVFFNTIVNGYCQVGDINKAYTT----------IEKMEAVGLRPNHV-----TYNSLVKK 436
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ KN+ + + +++K + + +T+I+ D E K L
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+Y LI N K A I+E V LG ++H R VP A+I++
Sbjct: 497 VISYGCLI------NCLCKDANILEA--------EVILGD-MVH-----RGVVPNAQIYN 536
Query: 420 LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+L D C AG A + + M + I P+L T+N+L+ GL K G+V
Sbjct: 537 MLI-DGSCI------------AGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKV 583
Query: 480 SDAEIYRKE--KKSIQADALSKDAV 502
+AE E +K + D ++ +++
Sbjct: 584 MEAENLASEITRKGLSFDVITYNSL 608
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 193/504 (38%), Gaps = 95/504 (18%)
Query: 61 GFNHDRFTYTTMLD-------------IFGEAKR----------------------ISSM 85
GF DRFTYTT+ D + EA R +
Sbjct: 317 GFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKA 376
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+ V + E G+ V + ++++ GD++ A E+M+ P V+Y + +K
Sbjct: 377 EEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKK 436
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
++EA K+M+++G+ PN TY L++ R+ ++ +I +M++ G++P+
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPN 496
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE-NDSLLWQV 264
+ LI CK +IL M + ++ + +A + D+
Sbjct: 497 VISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAF---- 552
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
+F E ++ VT +I L+ L KK ++ ++L S I K + D
Sbjct: 553 --RFFDEMVAREIVPTLVTYNI---------LINGLCKKGKVMEAENLASEITRKGLSFD 601
Query: 325 SAVISTIIE--------------------------VNCDHR-----RRDGALLA---FEY 350
+++I +N HR ++G +L ++
Sbjct: 602 VITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQE 661
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG------VYLGALLIHR 404
++M+L +R Y ALI ++ K + M G + LG R
Sbjct: 662 MLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGR 721
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
+ + V KI L+P+ T TY LI + D A Y+ M G PS+
Sbjct: 722 MHKVKNLVNDMKIRGLIPK----TETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVS 777
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKE 488
+ L+ GL + GR DA++ E
Sbjct: 778 ICDNLITGLREEGRSHDADVICSE 801
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 164/424 (38%), Gaps = 36/424 (8%)
Query: 73 LDIFGEA----KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
L++F E+ KR +F + E G+ D Y + GD+ A+ + MK
Sbjct: 150 LNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMK 209
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P + Y + L R+K+A ++ EM+ R + PN TY L++ + G+ E
Sbjct: 210 RGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLE 269
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA I +M+ V+P N L+ C+A + M+E + L E +
Sbjct: 270 EAFNIRERMKVENVEPTIITFNSLLNGLCRA----------QMMEEAQRVL------EEM 313
Query: 249 QTFKVADE--NDSLLWQVH---PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + + + L+ H +AV ++ SI L+ L K+
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSI---LLNALCKE 370
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
N+ + +L ++ + +TI+ C + A E + L Y
Sbjct: 371 GNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTY 430
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
+L+ ++ + + +++M + G V LI G R + F +L E
Sbjct: 431 NSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYG---RSCLFDRCFQILEE 487
Query: 424 DQK-----CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
+K +Y LI + +A I M +G+ P+ +N+L+ G G+
Sbjct: 488 MEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547
Query: 479 VSDA 482
+ DA
Sbjct: 548 LKDA 551
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + +Y +++ + I + + M +G+ +A Y ++ AG +
Sbjct: 491 KGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKD 550
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++EM +E PT+V+Y + L +V EA ++ E+ ++GL + TY L+
Sbjct: 551 AFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLIS 610
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
AG ++ALE++ M+++G++P + LI C K G
Sbjct: 611 GYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG 651
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/362 (18%), Positives = 148/362 (40%), Gaps = 24/362 (6%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
V + ++ MK P++ S +++ L R ++ ++ E+++ GL P+ + Y
Sbjct: 128 VSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGK 187
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
++ V+ G + A+E+ + M+ GV P N++I CK + + M + R
Sbjct: 188 AIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR 247
Query: 237 LALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+A + + + + Q+ F+ I + VE V I S+ GL
Sbjct: 248 VAPNRITYNTLIDGY-------CKVGQLEEAFN---IRERMKVENVEPTIITFNSLLNGL 297
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ + + +L + D +T+ + + D ++ E +V+ +
Sbjct: 298 C----RAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGV 353
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS-LGVYLGALL-----IHRLGSARR 410
+ L+ L K K E++++ + G + +GV+ ++ + + A
Sbjct: 354 QILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYT 413
Query: 411 PVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+ + L P TY +L+ + + ++A K K M KG+ P++ T+N L+
Sbjct: 414 TIEKMEAVGLRPNH----VTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI 469
Query: 471 AG 472
G
Sbjct: 470 DG 471
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS-AVISTIIEVNCDHRRRDGALLA 347
PL D ++L + + +V+ + L +M K L S A ++ +E +R + L
Sbjct: 112 PLFSD--MLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQL 169
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
F V+ L ++ Y I +KL + E++ M + G S GV++ ++I L
Sbjct: 170 FSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCK 229
Query: 408 ARRPVPAAKIFSLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
+R A K+F + + + TY LI Y G ++A I + M + + P++ T
Sbjct: 230 EKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIIT 289
Query: 466 FNVLLAGLEKLGRVSDAE 483
FN LL GL + + +A+
Sbjct: 290 FNSLLNGLCRAQMMEEAQ 307
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 9/190 (4%)
Query: 29 IKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+ +D T N ++ + ++KA + + +S G TY ++ G+ +
Sbjct: 598 LSFDVITYNSLISGYSSAGNVQKALELYETMKKS-GIKPTLNTYHRLIAGCGKEGLVLVE 656
Query: 86 KYVFELMQEKGINI--DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
K E++Q +N+ D V Y +++H GDV A ++ M+ + P ++Y +
Sbjct: 657 KIYQEMLQ---MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLI 713
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
F R+ + ++ +M RGL P TY +L+ + ++ A + +M E G
Sbjct: 714 LGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFT 773
Query: 204 PDKAACNILI 213
P + C+ LI
Sbjct: 774 PSVSICDNLI 783
>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 172/435 (39%), Gaps = 44/435 (10%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY T+L + + + V M+E G+ DAVTY S++ +G A
Sbjct: 42 GLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMREAGVRPDAVTYNSLITGADRSGLTVRA 101
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++++EM P SY A M LF + + A V+ +M RG+ P TY L++
Sbjct: 102 LDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYRVFADMADRGVAPCATTYNTLLDG 161
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR---------- 230
L++AG A +F +Q AG+ N +I CK+G+ ++L+
Sbjct: 162 LLKAGHVTNAFRMFRYLQRAGLPVGIVTYNTMINGLCKSGKVGYARMVLKELGRTEHAPN 221
Query: 231 ---YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
Y + RY F++ L+TF SLL +IS DA + T
Sbjct: 222 AVTYTTVMKCCFRYGRFEQGLETFL------SLL-------EGGYIS--DAFPYTT---- 262
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
++ L+KK + ++ ++ LD+A +T+I + C + + A
Sbjct: 263 --------VISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKINDAFEL 314
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGS 407
+ L + + L+ L K+ + + M G V LI L
Sbjct: 315 LNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMGMQSNVVAYNCLIDALCK 374
Query: 408 ARRPVPAAKIF-SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
A KI S+ +D +YT+L+ G A K + +G +
Sbjct: 375 CHEVDAAIKILHSMKLKDD---FSYTSLVHGLCKVGRYHMASKFLRICLHEGNNVLASAK 431
Query: 467 NVLLAGLEKLGRVSD 481
+++GL G +D
Sbjct: 432 RAVISGLRSAGFKND 446
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 135/359 (37%), Gaps = 30/359 (8%)
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
A V + I+ GLPP+ TY L+ R + L + +M+EAGV+PD N LI
Sbjct: 30 RAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMREAGVRPDAVTYNSLI 89
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE------NDSLLWQVHPQ 267
++G L +R + +F E L++ D L HP+
Sbjct: 90 TGADRSG------LTVRALD---------LFDEMLRSGVAPDSWSYNALMHCLFRSGHPE 134
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
+ +D + + L+ LLK ++ + + + +
Sbjct: 135 HAYRVFAD-----MADRGVAPCATTYNTLLDGLLKAGHVTNAFRMFRYLQRAGLPVGIVT 189
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+T+I C + A + + + + Y ++ + F + E +
Sbjct: 190 YNTMINGLCKSGKVGYARMVLKELGRTEHAPNAVTYTTVMKCCFRYGRFEQGLETFLSLL 249
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSAD 445
+ G+ + +I L R A L+ + A Y LI + G +
Sbjct: 250 EGGYISDAFPYTTVISALVKKGRMQEANTYCELMIQSGSTLDNACYNTLIHLRCQEGKIN 309
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE--IYRKEKKSIQADALSKDAV 502
A ++ M G+ TF++L+ GL K+G++ AE I+ E +Q++ ++ + +
Sbjct: 310 DAFELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMGMQSNVVAYNCL 368
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G TYTT++D+F + + + + +LM + + +Y S+++ L VD A
Sbjct: 131 GITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQA 190
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++EEMKL C P V+Y + L + R+ EA D+ M++ G P+ T+T L+E
Sbjct: 191 YQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEG 250
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--NRLA 238
L + +EA +F M + G PD +L+ K C + R + ++R +
Sbjct: 251 LCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVI 310
Query: 239 LRYPVFKE 246
L P+F+E
Sbjct: 311 LYTPIFRE 318
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 169/434 (38%), Gaps = 54/434 (12%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T +LD+ A+R + VF + + +A++Y ++ L G +D A + EM
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
++ P + +Y + L R+ A + ++ M + P+ TY L+ L + G+
Sbjct: 62 AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRV 117
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRYPVF 244
+A +F M+ AG+ P LI+ CK + T +L+ M + + Y
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSI 177
Query: 245 KEALQTFKVADENDSLLWQVH-PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
L + D+ L ++ P+ ++ N T I G L K
Sbjct: 178 INGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYN-------TLIHG-----------LCVK 219
Query: 304 KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+ L LL+ +++ Q D + +IE C R A + F+ K + +
Sbjct: 220 QRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTH 279
Query: 364 LALIG---ILIKL-------NTFPKVAEIVEEMTKAGHSLGVYLG----ALLIHRLGSAR 409
L+ IL KL +P E V T LG G A L+ ++ AR
Sbjct: 280 TVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKM--AR 337
Query: 410 RPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVL 469
R VP + TYTA +A + ++ M +GI P + +NVL
Sbjct: 338 RGVPPNVV------------TYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVL 385
Query: 470 LAGLEKLGRVSDAE 483
+ G K R+ AE
Sbjct: 386 VDGFCKADRLDMAE 399
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 176/456 (38%), Gaps = 61/456 (13%)
Query: 32 DSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D +T N V+ T + +A FF + D TY T+L + R++ +
Sbjct: 69 DVFTYNVVIDTLCKARRISRAIEFFETMPEP-----DVVTYNTLLGGLCKNGRVAQACSL 123
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F M+ GI VTYT+++ + A + + M ++C PT+ SY + + L
Sbjct: 124 FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 183
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
N +V +A +++EM G P+ TY L+ L + EA ++ + M E G QPDK
Sbjct: 184 NRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKIT 243
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF 268
LIE C + ++ + M + A L T V +L ++ P
Sbjct: 244 FTALIEGLCTTDRIKEAFVLFQGMAKQGCA-------PDLVTHTVLVSKLCILRKLRPAL 296
Query: 269 S--PEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
S + + +AV T P+ + G +++ LL + + + +
Sbjct: 297 SVVRNYPACPEAVILYT-----PIFRELG------RRRGFDRAARLLQKMARRGVPPNVV 345
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+ + D + A F ++ + + AY L+ K + ++V M
Sbjct: 346 TYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYM 405
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADK 446
++G LP + TY L+G + G +
Sbjct: 406 DQSG------------------------------LPPN---IVTYNTLVGHHCRKGKVEA 432
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ TM +G P + T++ L+AGL +G+ A
Sbjct: 433 IGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAA 468
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 154/403 (38%), Gaps = 28/403 (6%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
VT +++ L A + V ++ + ++C P +SY +K L ++ +A E
Sbjct: 1 VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M + L P+ +TY V+++ L +A + A+E F M E PD N L+ CK G
Sbjct: 61 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS----LLWQVHPQFSPEFISDND 277
+ M+ + + + F + ++ L + SP S
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSY-- 174
Query: 278 AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
SI GL K + + L + + D +T+I C
Sbjct: 175 ------------CSIINGLC----KNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCV 218
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+R A V+ ++ + ALI L + + + + M K G + +
Sbjct: 219 KQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVT 278
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
+L+ +L R+ PA + P + YT + D+A ++ + M R+
Sbjct: 279 HTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARR 338
Query: 458 GIHPSLGTFNVLLAGLE--KLGRVSDAEIYRKEKKSIQADALS 498
G+ P++ T+ GL K G + E R ++ I+ D ++
Sbjct: 339 GVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 381
>gi|222624963|gb|EEE59095.1| hypothetical protein OsJ_10946 [Oryza sativa Japonica Group]
Length = 318
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L H +A FN + + RG+N D TYTT +D + I + ++ M +KG+
Sbjct: 110 LFAHKMGSEALRVFNEI-KLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEP 168
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ Y S++ + AGD + A +++EM K + VS + + RV EA ++
Sbjct: 169 NEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMF 228
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+EM+++G+ + TY +L++ L +AG+ EA++++ ++ +G++P + LI+ C+
Sbjct: 229 EEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEE 288
Query: 220 GETRTIILILR 230
G+ + +L+
Sbjct: 289 GQVDAAVELLK 299
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF ++ +G N+DAVTYT+ + L G +D A IW EM K P +Y + +
Sbjct: 122 VFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYYC 181
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ A VY EM+ +GL + + +L+ G+ +EAL +F +M + G++ D
Sbjct: 182 KAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVI 241
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
NILI+ CKAG I + + + L F + T + D+ + + P
Sbjct: 242 TYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLKPF 301
Query: 268 F 268
F
Sbjct: 302 F 302
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P V Y + LF + EA V+ E+ RG + TYT ++ L + G +EA +I
Sbjct: 98 PDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQI 157
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGE 221
+++M + G++P++ A L+ CKAG+
Sbjct: 158 WNEMVDKGMEPNEYAYCSLVAYYCKAGD 185
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D+ + II H+ AL F N++ Y I L K+ + +I
Sbjct: 99 DTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIW 158
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSA 441
EM G Y L+ A A K++ L ++ T + L+ + +
Sbjct: 159 NEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTH 218
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
G D+AL +++ M +KGI + T+N+L+ GL K GR+S+A ++Y +
Sbjct: 219 GRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQ 265
>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
Length = 854
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 191/456 (41%), Gaps = 49/456 (10%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR--ISSMKYVFELMQEKGINIDAVT 103
+ AW F ++ +RG + + M IFG R + + +M + DA +
Sbjct: 207 VRAAWKVFEEMA-ARGPRPNLAIFNAM--IFGLCHRGLVRVSGGLLGVMGRFHVVPDACS 263
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
Y +M G + A N+++EM++ C PTIV+Y M L R+ EA ++ EM+
Sbjct: 264 YNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEML 323
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
Q G+ N T+ VL++ +AG+ E A ++M+ G+ PD NIL K G+
Sbjct: 324 QAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAA 383
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVT 283
+L + + E +F L T + L W +DA E +
Sbjct: 384 LFVLDQQQLHE--------MFGSQLSTDGIDMLICRLCWDGRL---------DDAWELLC 426
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDS---LLSGIMDK-SIQLDSAVISTIIEVNCDHR 339
+ IE + + L+ + D L M+K + S+ ++ +I C+
Sbjct: 427 SAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRG 486
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV------EEMTKAGH-- 391
R D A L EY V+M Y + I L++ + +++ ++M G
Sbjct: 487 RLDQARLFLEYMVRM-------GYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQP 539
Query: 392 ---SLGVYLGALL-IHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
+ Y+ L + L A L+P + TY +LI + AG+ +A
Sbjct: 540 DFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNN----FTYNSLISAFCRAGNVSEA 595
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LK+ + M + G+ P + T N+L+ G + G ++ A
Sbjct: 596 LKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTAN 631
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G D FT ++D F +++ +F M G+ D VTY ++++ + D+
Sbjct: 603 RQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDI 662
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+GA+ +M C P I +Y +M L N + A + E+ PN TY L
Sbjct: 663 NGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTL 722
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
M+ + + + A+ + ++ + QP+ NIL CK G
Sbjct: 723 MDGIC-SDVLDRAMILTGRLIKLAFQPNTVTINILFSHFCKNG 764
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + FTY +++ F A +S + + M++ G+ D T ++ G ++
Sbjct: 570 RGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNT 629
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N++ M P +V+Y + + + A +M+ G P+ +TY + M
Sbjct: 630 ANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMH 689
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
L A+ + ++ P+ N L++ C R +IL R +K
Sbjct: 690 SLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGICSDVLDRAMILTGRLIK 743
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 135/340 (39%), Gaps = 27/340 (7%)
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
EA DV + + G P+ L+ L R G+ A ++F +M G +P+ A N +I
Sbjct: 174 EALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARGPRPNLAIFNAMI 233
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS--PE 271
C G R +L M R+ V +A ++ + + L Q F+ E
Sbjct: 234 FGLCHRGLVRVSGGLLGVMG------RFHVVPDAC-SYNILMKGHCLYGQAEDAFNLFDE 286
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
VT +I L+ L ++ +V L ++ +++++ + +
Sbjct: 287 MRVTGCCPTIVTYNI---------LMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVL 337
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ + + A +A M L + + L K F K A V + +
Sbjct: 338 IDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYK---FGKAALFVLDQQQLHE 394
Query: 392 SLGVYLGA----LLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSAD 445
G L +LI RL R A ++ E Q + + ALI Y G +
Sbjct: 395 MFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDE 454
Query: 446 KALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
+A ++YKTM + G+ PS T N L+ GL GR+ A ++
Sbjct: 455 EAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLF 494
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVY 438
+ +EM G + +L++ L R V A +F L + T T+ LI Y
Sbjct: 282 NLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDGY 341
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALS 498
AG + A M G+ P TFN+L AG K G+ + + +++ + LS
Sbjct: 342 AKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHEMFGSQLS 401
Query: 499 KDAVPMEEKICDLLYGG 515
D + M IC L + G
Sbjct: 402 TDGIDM--LICRLCWDG 416
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 88/159 (55%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T ++++D + K+ + +Y+F M + G+ ID +Y +++ LS A VD AV ++
Sbjct: 205 DVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILF 264
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EM+ K P ++Y+ + L R+ D+ EM G N TY+ L+ L ++
Sbjct: 265 KEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKS 324
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G ++ A+ IF+K+++ G +P+ NIL++ CK G +
Sbjct: 325 GHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLK 363
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
KA FN ++++ G D +Y M++ +AK + +F+ MQ K + D +TY++
Sbjct: 223 NKARYIFNAMAQN-GVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYST 281
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L G + ++ +EM+ +++Y++ + +L + A ++ ++ +G
Sbjct: 282 LIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKG 341
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
PN TY +L++ L + G+ ++A EIF + G + D ++I C+
Sbjct: 342 FEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCR 393
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 74/126 (58%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY+T++D G+ RIS + + + M+ G + + +TY+S+++ L +G D A+ I+
Sbjct: 275 DTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIF 334
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++K K P +V+Y + L N R+K+A +++ +++ +G + YTV++ L R
Sbjct: 335 TKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCRE 394
Query: 185 GKYEEA 190
++EA
Sbjct: 395 ALFDEA 400
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 152/351 (43%), Gaps = 35/351 (9%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A V ++++ G P+ T T L++ L + ++AL + G + D + LI
Sbjct: 29 AFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLIN 88
Query: 215 KCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFIS 274
CK+GET+ + M NRL K+ L V D D V + P+ ++
Sbjct: 89 GLCKSGETKAPDQFMYSMIINRLC------KDKL----VVDAYDLYCEMVVKRIFPDVVT 138
Query: 275 DN-------------DAV----EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
N DA+ E +I + L+ L K+ ++ S+L+ ++
Sbjct: 139 YNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMI 198
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+S++ D S++I+ ++ + A F + + ++ +Y +I L K
Sbjct: 199 KQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVD 258
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYT 432
+ + +EM + + LI LG R + ++ L+ E + TY+
Sbjct: 259 EAVILFKEMQFKSMTPDTITYSTLIDGLGKLGR---ISYVWDLIDEMRATGRSANVITYS 315
Query: 433 ALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+L+ V +G D A++I+ + KG P++ T+N+L+ GL K GR+ DA+
Sbjct: 316 SLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQ 366
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D+F Y+ +++ + K + ++ M K I D VTY ++++ G ++ A+ ++
Sbjct: 100 DQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLF 159
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM+LK P + S+ + L VK V MI++ + P+ T + L++
Sbjct: 160 NEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLV 219
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
K +A IF+ M + GV D + NI+I KA +++ + M+
Sbjct: 220 KKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQ 268
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D T TT+L + + + + KG +D V+Y ++++ L +G+
Sbjct: 40 GYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKA- 98
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
P Y+ + L + V +A D+Y EM+ + + P+ TY L+
Sbjct: 99 -------------PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYG 145
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
G+ E+A+ +F++M+ + P+ + NILI+ CK G+ +
Sbjct: 146 FCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVK 188
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY T++ F ++ +F M+ K I + ++ ++ L GDV G ++
Sbjct: 135 DVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVL 194
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M + P +V+ ++ + FL + +A ++ M Q G+ + +Y +++ L +A
Sbjct: 195 AVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKA 254
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+EA+ +F +MQ + PD + LI+ K G
Sbjct: 255 KMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGR 291
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
T ++LI YF A+KA I+ M + G+ L ++N+++ GL K V +A I K
Sbjct: 206 VVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFK 265
Query: 488 EK--KSIQADALS 498
E KS+ D ++
Sbjct: 266 EMQFKSMTPDTIT 278
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 4/228 (1%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D +T N ++ H ++KA F +SR RG TYT ++ + ++ +
Sbjct: 655 DVFTYNILINGHCKEGNVKKALEIFENMSR-RGVRATVVTYTALIYALSKKGQVQETDKL 713
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ +GI D V Y ++++ S +G++D A I EM+ K P V+Y M+ L L
Sbjct: 714 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 773
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
RV EA + EM +RG+ P+ TY L+ G ++AL I ++M G P
Sbjct: 774 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 833
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
N LI+ CK G+ +++ M EN + + ++ DE
Sbjct: 834 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 163/395 (41%), Gaps = 30/395 (7%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
T+ ++ L +AG A+ + +M P V+Y + RV+ A D+ +E
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 539
Query: 162 MIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKA 219
M +RG + PN YTY ++ + G+ +EA+++F +M G V+P+ N LI C
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G+ T +L M E +A+ + + D + +++ + + + A
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHAL-FMDGRGTEAYELVEEMGGKGL----AP 654
Query: 280 EFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR 339
+ T +I L+ K+ N+ + + + ++ + +I
Sbjct: 655 DVFTYNI---------LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 705
Query: 340 RRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG----- 394
+ F+ +V+ + + Y ALI + EI+ EM K +
Sbjct: 706 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 765
Query: 395 -VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKT 453
+ G L+ R+ AR+ + + P+ TY LI Y G AL+I
Sbjct: 766 TLMRGLCLLGRVDEARKLIDEMTERGIQPD----LVTYNTLISGYSMKGDVKDALRIRNE 821
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
M KG +P+L T+N L+ GL K G+ DAE KE
Sbjct: 822 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 856
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G D FTY +++ + + +FE M +G+ VTYT++++ LS G V
Sbjct: 649 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 708
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++E + P +V Y A + + + A ++ EM ++ + P+ TY LM
Sbjct: 709 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 768
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE---N 235
L G+ +EA ++ +M E G+QPD N LI G+ + + I M N
Sbjct: 769 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 828
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIE 287
L Y + L D+ ++++ + V +P+ + +E +TT+ E
Sbjct: 829 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF 76
A +LL+ +P + ++ T N V+ + ++ A + G +++TY T++ +
Sbjct: 502 ALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 560
Query: 77 GEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ R+ VF+ M KG + +AV Y +++ + G +D A+ + M + T
Sbjct: 561 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 620
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ +Y + LF++ R EA ++ +EM +GL P+ +TY +L+ + G ++ALEIF
Sbjct: 621 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 680
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETR 223
M GV+ LI K G+ +
Sbjct: 681 NMSRRGVRATVVTYTALIYALSKKGQVQ 708
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TY ++ R + + E M KG+ D TY +++ G+V
Sbjct: 615 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 674
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+E M + T+V+YTA + L +V+E ++ E ++RG+ P+ Y L+
Sbjct: 675 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 734
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII 226
+G + A EI +M++ + PD N L+ C G E R +I
Sbjct: 735 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ + + ++ + + M E+G+ + TY ++H L G A + EEM
Sbjct: 589 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 648
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K P + +Y + VK+A ++++ M +RG+ TYT L+ L + G+ +
Sbjct: 649 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 708
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
E ++F + G++PD N LI +G I+ M++ R+A
Sbjct: 709 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 758
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
++ ++ + + +I CD + D ALL + V+ + + Y L+ L +
Sbjct: 582 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 641
Query: 381 EIVEEMTKAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
E+VEEM G + V+ +LI+ + G+ ++ A +IF + + TYTALI
Sbjct: 642 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK---ALEIFENMSRRGVRATVVTYTALI 698
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQ 493
G + K++ R+GI P L +N L+ G + A EI + EKK I
Sbjct: 699 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 758
Query: 494 ADALS 498
D ++
Sbjct: 759 PDDVT 763
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FF W +NH +Y +L++ ++ R + + M G + TY ++ L
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSL 62
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
A + A +++ M + C P + SY+ + L +V EA ++ EMI G PN
Sbjct: 63 CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
TY L+ L + GK +EA+++FS+M G PD N+LI+ K G+
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGD 172
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 141/348 (40%), Gaps = 20/348 (5%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + TY ++L + ++ +F M +G D V Y ++ S GD+ A
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++EEM K C PT+ +Y + + ++K+M+++G PN +T+ L++
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA-- 238
+ G EA +F +M+ G PD + N L+ C G+ +LR M + +
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 239 -LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ Y + + D L +++ P+ + DA + T ++
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEI-----PKSGLEPDAFSYST------------II 339
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L + + A + ++ D+AV+ ++ C R + F+ VK +
Sbjct: 340 DCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECV 399
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
Y L+ L K V EI E+T+ G S V + +++ L
Sbjct: 400 PLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 161/382 (42%), Gaps = 25/382 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ +TY +L +A+R + VF M +G + + +Y+ ++ L VD A +
Sbjct: 51 NTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELL 110
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM P +V+Y + + L ++KEA D++ M+ RG PP+ Y VL++ +
Sbjct: 111 NEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKK 170
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G EA +F +M E G P N L+ + GE + + + M F
Sbjct: 171 GDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF 230
Query: 245 KEALQTF-KVAD--ENDSLLWQVHP-QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
L F K+ D E L ++ P+ +S N + + + +G Q L+ +
Sbjct: 231 NNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCS--KGKPHEAQRLLREM 288
Query: 301 LKK---KNLVAIDSLL-----SGIMDKSIQL-----------DSAVISTIIEVNCDHRRR 341
++ ++V+ + L+ SG +D +I+L D+ STII+ C +
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
A + F+ + + + L+ L + + E+ + M K + LL
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLL 408
Query: 402 IHRLGSARRPVPAAKIFSLLPE 423
+++L A+R +IF L E
Sbjct: 409 MYKLCKAKRSDDVCEIFHELTE 430
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%)
Query: 98 NIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
N ++Y ++ L+ +G D + +M C P +Y ++ L R +EA
Sbjct: 14 NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARS 73
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
V++ M +G PN ++Y++L+ L R K +EA E+ ++M + G QP+ L+ C
Sbjct: 74 VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133
Query: 218 KAGETRTIILILRYM 232
K G+ + + + M
Sbjct: 134 KMGKLKEAVDLFSRM 148
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 6/230 (2%)
Query: 34 YTVNQVLKTHPPM----EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
+T N +L M E LF RS G D +Y T++ + + +
Sbjct: 228 FTFNNLLDGFCKMGDMVEAHRLFLEM--RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLL 285
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
M G+ D V+Y ++ S +G +D A+ ++ E+ P SY+ + L
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+V A V+K+MI G P+ L+ L R + E+ E+F M + P
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDS 259
N+L+ K CKA + + I + E + + K L+T + +D+ ++
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEA 455
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 131/373 (35%), Gaps = 59/373 (15%)
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+SY +++L + R Y +M+ G PN YTY L+ L +A ++EEA +F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
M G P+ Y + L + DE
Sbjct: 78 MAAQGCSPN--------------------------------VFSYSILIAGLCRGQKVDE 105
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI 316
LL E I VT L+ L K L L S +
Sbjct: 106 AAELL--------NEMIDGGHQPNVVTYG---------SLLSGLCKMGKLKEAVDLFSRM 148
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
+ + D V + +I+ A FE ++ Y +L+ + F
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF----SL-LPEDQKCTATY 431
+V + ++M + G ++ L+ V A ++F SL P D +Y
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD---VVSY 265
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA--EIYRKEK 489
L+ S G +A ++ + M R G+ P + ++N+L+ G K G + A Y K
Sbjct: 266 NTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPK 325
Query: 490 KSIQADALSKDAV 502
++ DA S +
Sbjct: 326 SGLEPDAFSYSTI 338
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F + +S G D F+Y+T++D A ++ + VF+ M G DA
Sbjct: 313 LDHAIKLFYEIPKS-GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVI 371
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L + + +++ M EC P I Y M L R + +++ E+ +R
Sbjct: 372 PLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTER 431
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEA 190
G P+ V++E L R+ E A
Sbjct: 432 GFSPDVEISKVILETLRRSDDKEAA 456
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 15/173 (8%)
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C +R + A F + +Y LI L + + AE++ EM GH V
Sbjct: 63 CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLL-----PEDQKCTATYTALIGVYFSAGSADKALKI 450
L+ L + A +FS + P D Y LI + G +A ++
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPD---GVVYNVLIDGFSKKGDMGEAYRL 179
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
++ M KG P++ T+N LL+G + G + S+ D L + VP
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ-------SLFKDMLRQGCVP 225
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 37/454 (8%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
++Q LKT M K S R F+ D Y + + R + ++ M +
Sbjct: 25 IDQALKTFDEMTK--------SNCRVFSID---YNRFIGVLVRQSRFDLAEQYYDRMIPQ 73
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
G ++++ TY+ + L + + E+M P I +Y Y+ +L +++ A
Sbjct: 74 GFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVA 133
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
V + M+++G P+ TYT+++ L RAG+++ A+EI+ M G PD+ AC L+
Sbjct: 134 LGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLG 193
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
C G+ + R+ ++ + F A W Q F+
Sbjct: 194 LCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAG------WIDKAQSIISFMRR 247
Query: 276 NDA-VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
N + VT ++ L+ + L ++L+ + ++ D + +++
Sbjct: 248 NGCEPDLVTYNV---------LLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKG 298
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C R D A + ++ + +Y +I L + + ++ EEM G +
Sbjct: 299 LCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPD 358
Query: 395 VYLGALLIH---RLGS---ARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKAL 448
V +LI R GS A++ + LLP+ YT ++ G A
Sbjct: 359 VVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPD----RVLYTTIVDHLCKTGKMGMAH 414
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ M GI P + ++N L+ GL + RVS+A
Sbjct: 415 SVFCDMVESGITPDVVSYNALINGLCRASRVSEA 448
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 32 DSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D Y+ N++LK ++KA++ ++G D +Y T++ A +
Sbjct: 288 DVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGL-CDVVSYNTIIKALCTASHTKRAYKL 346
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
FE M KGI D VT+T ++ G + A + ++M P V YT + L
Sbjct: 347 FEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCK 406
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
++ A V+ +M++ G+ P+ +Y L+ L RA + EA+ ++ M G PD+
Sbjct: 407 TGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVT 466
Query: 209 CNILI 213
++I
Sbjct: 467 FKLII 471
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 137/370 (37%), Gaps = 24/370 (6%)
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
AG +D A+ ++EM C + Y ++ +L R A Y MI +G N +T
Sbjct: 22 AGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFT 81
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
Y+ + L + + ++ M G PD A NI + C + + +++ M
Sbjct: 82 YSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMV 141
Query: 234 ENRLALRYPVFKEALQTFKVADENDSL--LWQ--VHPQFSPEFISDNDAVEFVTTDIEGP 289
E + + A DS +W+ V FSP D A
Sbjct: 142 EKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSP----DEKAC---------- 187
Query: 290 LSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
+ LVL L + L G M I+ ++ +++I C D A
Sbjct: 188 ----RALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIIS 243
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+ + + Y L+ + ++++M ++G VY L+ L A
Sbjct: 244 FMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKAN 303
Query: 410 RPVPA-AKIFSLLPEDQKC-TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
R A + + + C +Y +I +A +A K+++ M KGI P + TF
Sbjct: 304 RLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFT 363
Query: 468 VLLAGLEKLG 477
+L+ + G
Sbjct: 364 ILIKAFLREG 373
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ + L T ++A+ F + +G D T+T ++ F + K + + M
Sbjct: 329 TIIKALCTASHTKRAYKLFEEMG-GKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTG 387
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
G+ D V YT+++ L G + A +++ +M P +VSY A + L RV E
Sbjct: 388 LGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSE 447
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A +Y++M G P+ T+ +++ L+ K A ++ +M E G D A L+
Sbjct: 448 AMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVN 507
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 193/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSNTXEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELXVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V + I N A+ + T L+ L + + JL +MDK +
Sbjct: 241 RLVZ-EMKGXGIKPN-AITYST------------LLPGLCNAEKMSEARVJLKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E LI K+ + K
Sbjct: 287 APTDNSIFMRLIXSHCKSGNLDAAADVLKAMIRLSVPTEAGHXGXLIENFCKVGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P+ A K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKXAYNSLVQSYLKKNEPXDAK 458
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELXVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 369
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D F Y+ M++ + ++ V M + G + Y ++++ L A + A+ ++
Sbjct: 128 DAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVF 187
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM + C PTIV+Y + L ++R EA D+ KEM+++GL P+ TY++LM+ L
Sbjct: 188 REMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLG 247
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
K E AL++++++ + G +PD N LI C G+T+
Sbjct: 248 HKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQ 286
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W R N ++ M+ + R+ + ++ELM++ G D++TY ++H
Sbjct: 48 WEMMGREGNRSVASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKN 107
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G ++ ++ + E + K +Y+A + L ++++A V MI+ G PN + Y
Sbjct: 108 GYINKSLRVLETAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVY 167
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
L+ L+ A K E+A+ +F +M P NILI CK+
Sbjct: 168 NALINGLIGASKSEDAIRVFREMGITHCSPTIVTYNILINGLCKS 212
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G+ D TY ++ F + I+ V E + KG +DA Y+++++ L +
Sbjct: 86 KKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDAFAYSAMINGLCKETKL 145
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+++ M C P Y A + L + ++A V++EM P TY +L
Sbjct: 146 EKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITHCSPTIVTYNIL 205
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ L ++ ++ EA ++ +M E G+ P ++L++ C
Sbjct: 206 INGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLC 245
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFEL 91
S +N + K +EKA N + +S G + Y +++ + G +K +++ VF
Sbjct: 133 SAMINGLCK-ETKLEKAISVLNGMIKS-GCKPNTHVYNALINGLIGASKSEDAIR-VFRE 189
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M + VTY +++ L + A ++ +EM K P++++Y+ MK L L +
Sbjct: 190 MGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHK 249
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
++ A ++ ++ + G P+ + L+ L GK + AL ++ M P+ N
Sbjct: 250 IEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNT 309
Query: 212 LIEKCCKAGETRTIILILRYMKENRL 237
L+E K G+ R ++I + +N L
Sbjct: 310 LMEGFYKDGDMRNALVIWARILKNEL 335
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V++ + + ++ DAV Y ++++ AG + +WE M +E ++
Sbjct: 2 ESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMG-REGNRSVA 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF N RV E +++ M + G + TY +L+ + G ++L +
Sbjct: 61 SFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ G D A + +I CK + I +L M
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGM 155
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 56 VSRSRGFNHDR---FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
V R G H TY +++ +++R + + M EKG+ +TY+ +M L
Sbjct: 186 VFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLC 245
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
++ A+ +W ++ P + + + L + + A +Y +M PN
Sbjct: 246 LGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLV 305
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
T LME + G AL I++++ + +QPD + NI ++ C IL L
Sbjct: 306 TQNTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAILFL 362
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 4/153 (2%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
DS ++ C + + +L E + + L+ AY A+I L K K ++
Sbjct: 93 DSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDAFAYSAMINGLCKETKLEKAISVL 152
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFS 440
M K+G ++ LI+ L A + A ++F + C+ TY LI
Sbjct: 153 NGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGITH-CSPTIVTYNILINGLCK 211
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ +A + K M KG+ PS+ T+++L+ GL
Sbjct: 212 SERFGEAYDLVKEMLEKGLTPSVITYSLLMKGL 244
>gi|218192883|gb|EEC75310.1| hypothetical protein OsI_11678 [Oryza sativa Indica Group]
Length = 473
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINI 99
L H +A FN + + RG+N D TYTT +D + I + ++ M +KG+
Sbjct: 265 LFAHKMGSEALRVFNEI-KLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEP 323
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+ Y S++ + AGD + A +++EM K + VS + + RV EA ++
Sbjct: 324 NEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMF 383
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
+EM+++G+ + TY +L++ L +AG+ EA++++ ++ +G++P + LI+ C+
Sbjct: 384 EEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEE 443
Query: 220 GETRTIILILR 230
G+ + +L+
Sbjct: 444 GQVDAAVELLK 454
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
VF ++ +G N+DAVTYT+ + L G +D A IW EM K P +Y + +
Sbjct: 277 VFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYYC 336
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ A VY EM+ +GL + + +L+ G+ +EAL +F +M + G++ D
Sbjct: 337 KAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVI 396
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
NILI+ CKAG I + + + L F + T + D+ + + P
Sbjct: 397 TYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLKPF 456
Query: 268 F 268
F
Sbjct: 457 F 457
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P V Y + LF + EA V+ E+ RG + TYT ++ L + G +EA +I
Sbjct: 253 PDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQI 312
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGE 221
+++M + G++P++ A L+ CKAG+
Sbjct: 313 WNEMVDKGMEPNEYAYCSLVAYYCKAGD 340
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D+ + II H+ AL F N++ Y I L K+ + +I
Sbjct: 254 DTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIW 313
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSA 441
EM G Y L+ A A K++ L ++ T + L+ + +
Sbjct: 314 NEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTH 373
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK 487
G D+AL +++ M +KGI + T+N+L+ GL K GR+S+A ++Y +
Sbjct: 374 GRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQ 420
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 129/359 (35%), Gaps = 20/359 (5%)
Query: 154 EATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNI 211
+A D + + R G+ P+ M +RA + + +FS + P D A
Sbjct: 131 DAADAAEVLASRLGIHPSLRALNFAMRSALRAARPDLVFRLFSAFSSSPDFPGDAATVAF 190
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L+ C G + +LR + + + + F A + +H +
Sbjct: 191 LVRACSAEGRPLDGLRLLRDGARRGVPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAG 250
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ D I Q ++ L K + + I + +D+ +T
Sbjct: 251 SVPDT--------------VIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTA 296
Query: 332 IEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
I+ C D A + V + AY +L+ K F ++ +EM G
Sbjct: 297 IDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGL 356
Query: 392 SLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALK 449
+L+ + R A +F + + + TY LI AG +A++
Sbjct: 357 KESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQ 416
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKI 508
+Y+ + G+ PS+ TF L+ + + G+V DA + K A K A P E K+
Sbjct: 417 VYEQLLSSGLEPSVSTFTPLIDTMCEEGQV-DAAV-ELLKPFFIAHRFLKRANPCESKV 473
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 187/452 (41%), Gaps = 61/452 (13%)
Query: 61 GFNHDRFTYTTMLDIFGE-AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G ++ TY T++D + +S++ + ++ + I + V Y++++ L G
Sbjct: 207 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTD 266
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N++ EM+ K P + +Y + + R EA + +EM +R + P+ T++VL+
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
LV+ GK+ EA E++++M G+ P+ N +I+ K + M +
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
F + + A D + +H +++ TT I G
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTIT---YTTLIHG----------- 432
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ NL A LL ++ + + +T+++ C++ + AL F+ K ++L+
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLD 492
Query: 360 RT-----------AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
+ Y LI LI F + E+ EEM G
Sbjct: 493 ASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG------------------ 534
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
L+P+ T TY ++I D+A +++ +M KG P + TF
Sbjct: 535 -----------LVPD----TITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTT 579
Query: 469 LLAGLEKLGRVSDA-EIY-RKEKKSIQADALS 498
L+ G K+GRV D E++ ++ I A+A++
Sbjct: 580 LINGYCKVGRVGDGLEVFCEMGRRGIVANAIT 611
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/486 (21%), Positives = 198/486 (40%), Gaps = 68/486 (13%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A FF+ + + + +TT+++ R+ + + M E G+ + +TY
Sbjct: 162 VSEALHFFHQICKP-----NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216
Query: 106 SVMHWLSNAGDVDGAVNIWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+++ + GD A+N+ +M+ + P +V Y+A + L+ + R +A +++ EM +
Sbjct: 217 TIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE 276
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE--- 221
+G+ PN +TY ++ +G++ EA + +M E + PD ++LI K G+
Sbjct: 277 KGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336
Query: 222 ---------TRTII--------LILRYMKENRLALRYPVF--------KEALQTFKV--- 253
R II +I + K+NRL +F + TF +
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396
Query: 254 ----ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
A D + +H +++ TT I G + NL A
Sbjct: 397 GYCGAKRVDDGMKLLHEMSRRGLVANTITY---TTLIHG-----------FCQLGNLNAA 442
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT-------- 361
LL ++ + + +T+++ C++ + AL F+ K ++L+ +
Sbjct: 443 LDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP 502
Query: 362 ---AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y LI LI F + E+ EEM G +I L R A ++F
Sbjct: 503 DVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMF 562
Query: 419 SLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ T+T LI Y G L+++ M R+GI + T+ L+ G ++
Sbjct: 563 DSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQV 622
Query: 477 GRVSDA 482
G ++ A
Sbjct: 623 GNINGA 628
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/508 (20%), Positives = 197/508 (38%), Gaps = 81/508 (15%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
+++T ++ F ++ F + + G + VT+++++H L V A++ + +
Sbjct: 112 YSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQ 171
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG- 185
+ C P ++++T M L RV EA + M++ GL PN TY +++ + + G
Sbjct: 172 I----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 227
Query: 186 ---------KYEE--------------------------ALEIFSKMQEAGVQPDKAACN 210
K EE A +FS+MQE G+ P+ N
Sbjct: 228 TVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYN 287
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+I C +G +LR M E +++ + + V AL E + L ++ P+
Sbjct: 288 CMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR 347
Query: 268 -FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
P I+ N ++ + K+ L A + + + K D
Sbjct: 348 GIIPNTITYNSMIDGFS------------------KQNRLDAAERMFYLMATKGCSPDVI 389
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
S +I+ C +R D + + L Y LI +L ++++EM
Sbjct: 390 TFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEM 449
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED-------------QKCTATYTA 433
+G V L+ L + + A ++F ++ + + TY
Sbjct: 450 ISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNI 509
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
LI + G +A ++Y+ M +G+ P T+N ++ GL K R+ +A + S+
Sbjct: 510 LICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEAT---QMFDSMG 566
Query: 494 ADALSKDAVPMEEKI---CDLLYGGDGV 518
+ S D V I C + GDG+
Sbjct: 567 SKGFSPDVVTFTTLINGYCKVGRVGDGL 594
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 164/451 (36%), Gaps = 106/451 (23%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE----------------------- 94
+ +G + + FTY M++ F + R S + + M E
Sbjct: 275 QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKF 334
Query: 95 ------------KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAY 142
+GI + +TY S++ S +D A ++ M K C P +++++
Sbjct: 335 FEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSIL 394
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+ RV + + EM +RGL N TYT L+ + G AL++ +M +GV
Sbjct: 395 IDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGV 454
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLW 262
P+ CN L++ C G+ K+AL+ FKV ++ L
Sbjct: 455 CPNVVTCNTLLDGLCNNGK----------------------LKDALEMFKVMQKSKMDLD 492
Query: 263 QVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
HP D+E + L+ L+ + + L + + +
Sbjct: 493 ASHP----------------FNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLV 536
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D+ +++I+ C R D A F+ + + + LI N + KV +
Sbjct: 537 PDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI------NGYCKVGRV 590
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAG 442
G L V+ RR + A I TY LI + G
Sbjct: 591 -------GDGLEVFCEM--------GRRGIVANAI------------TYRTLIHGFCQVG 623
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ + AL I++ M G++P T +L GL
Sbjct: 624 NINGALDIFQEMISSGVYPDTITIRNMLTGL 654
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 17 WDSAQDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTY 69
W AQ LL+ + + S +N ++K E L+ + R G + TY
Sbjct: 299 WSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR--GIIPNTITY 356
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+M+D F + R+ + + +F LM KG + D +T++ ++ A VD + + EM
Sbjct: 357 NSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSR 416
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
+ ++YT + + A D+ +EMI G+ PN T L++ L GK ++
Sbjct: 417 RGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKD 476
Query: 190 ALEIFSKMQEA-----------GVQPDKAACNILI 213
ALE+F MQ++ V+PD NILI
Sbjct: 477 ALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILI 511
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 195/473 (41%), Gaps = 42/473 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A F ++ RSR + +L + +R + + M+ + I + ++T
Sbjct: 57 LDDAIDLFGYMVRSRPLPC-VIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFT 115
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ + + A++ + ++ +P++V+++ + L + DRV EA + ++ +
Sbjct: 116 ILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK- 174
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
PN +T LM L R G+ EA+ + +M E G+QP++ +++ CK G+T +
Sbjct: 175 ---PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSA 231
Query: 226 ILILRYMKE-NRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVE 280
+ +LR M+E +R+ ++ + + D + SP + N +
Sbjct: 232 LNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291
Query: 281 FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
+ G S Q L+ + ++K M + S +I+ ++
Sbjct: 292 GFCS--SGRWSEAQRLLREMFERK------------MSPDVVTFSVLINALV-------- 329
Query: 341 RDGALLAFE--YSVKMDLNL--ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
++G E Y+ + + Y ++I K N + M G S V
Sbjct: 330 KEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVI 389
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTM 454
++LI A+R K+ + T TYT LI + G+ + AL + + M
Sbjct: 390 TFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEM 449
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA----EIYRKEKKSIQADALSKDAVP 503
G+ P++ T N LL GL G++ DA ++ +K K + A D P
Sbjct: 450 ISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP 502
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQV---LKTHPPMEKAWLFFNWVSRSRG 61
+ ++ + A++L + +P + D+ T N V L +++A F+ + S+G
Sbjct: 511 ICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMG-SKG 569
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F+ D T+TT+++ + + R+ VF M +GI +A+TY +++H G+++GA+
Sbjct: 570 FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGAL 629
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
+I++EM YP ++ + L+ + +K A
Sbjct: 630 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 183/443 (41%), Gaps = 54/443 (12%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A+ F + + +GF T+ ++++ F + ++ + M+++G++++ Y
Sbjct: 259 VESAYKLFKKL-KMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYN 317
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G A + +EM C P +V+Y + V+EA + ++ I+R
Sbjct: 318 NIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRR 377
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN TYT L+ + G+Y +A + +M +G++ D + LI AGE T
Sbjct: 378 GLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTA 437
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ I M NR L D+ ++ V
Sbjct: 438 LTIRDRMM-NRGILP-----------------DANIYNV--------------------- 458
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
L+ L KK L +L+ ++D++I D+ V +T+++ H D A
Sbjct: 459 ----------LMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAK 508
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
F+ ++ L+ Y +I K +++M +A H ++ + +I
Sbjct: 509 KLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGY 568
Query: 406 GSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
KIF L+ + Q C TYT+LI Y G A K++ M G+ PS
Sbjct: 569 VKQHNMNAVLKIFGLMVK-QNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPS 627
Query: 463 LGTFNVLLAGLEKLGRVSDAEIY 485
+ T+++L+ K ++ A Y
Sbjct: 628 VVTYSILIGSFCKEAKLGKAVSY 650
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 181/465 (38%), Gaps = 77/465 (16%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHW 110
FF+W S++ T + L R+ +++ E M+ K + V+
Sbjct: 83 FFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFTLEEMKTKETIPTREALSDVLCA 142
Query: 111 LSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG--- 166
++ G VD A+ ++ + KL P+ + + + +L + R++ A +Y EMI R
Sbjct: 143 YADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGD 202
Query: 167 -LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ + YT +++++ L G+ E+ +++ G P+ N LI+ CK GE +
Sbjct: 203 DICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESA 262
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
+ + L+ F LQTF + +A++ + +
Sbjct: 263 YKLFK-------KLKMKGFIPTLQTFGSLVNGFCKMGMF------------EAIDLLLLE 303
Query: 286 IEGPLSIDQGLVLILLKKKNLV-----------AIDSLLSGIMDKSIQLDSAVISTIIEV 334
++ D+GL + + N++ A D+L + + + D +T+I
Sbjct: 304 MK-----DRGLSVNVQMYNNIIDARYKLGFDIKAKDTL-KEMSENCCEPDLVTYNTLINH 357
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C + A E +++ L + Y L+ K + K + + EM+ +G +
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVD 417
Query: 395 VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
+ +Y ALI AG D AL I M
Sbjct: 418 M---------------------------------ISYGALIHGLVVAGEVDTALTIRDRM 444
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--KKSIQADAL 497
+GI P +NVL+ GL K G++S A++ E ++I DA
Sbjct: 445 MNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAF 489
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/496 (19%), Positives = 211/496 (42%), Gaps = 30/496 (6%)
Query: 11 ILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHD 65
I K +D L K + +K + YT++ ++ K L F+ + + G+ +
Sbjct: 196 IAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 255
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
T++T+++ R+S + + M E G D +T ++++ L +G A+ + +
Sbjct: 256 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 315
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+M C P V+Y + ++ + + A ++ ++M +R + + Y+++++ L + G
Sbjct: 316 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 375
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
+ A +F++M+ G+ + NILI C AG +LR M + ++ F
Sbjct: 376 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 435
Query: 246 EALQTF----KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
+ +F K+ + + +H +P+ I+ T+ I+G
Sbjct: 436 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT-------YTSLIDG-----------FC 477
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K+ +L + ++ ++ K + + +I C R D L F + +
Sbjct: 478 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 537
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y LI +L E+ +EM + +L+ L A +IF +
Sbjct: 538 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 597
Query: 422 PEDQK--CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+ + Y +I +A D A ++ ++ KG+ P + T+N+++ GL K G +
Sbjct: 598 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 657
Query: 480 SDAE-IYRKEKKSIQA 494
S+AE ++RK ++ A
Sbjct: 658 SEAELLFRKMEEDGHA 673
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 159/416 (38%), Gaps = 57/416 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R D Y+ ++D + + + +F M+ KGI + +TY ++ NAG D
Sbjct: 355 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 414
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +M ++ P +V+++ + +++EA +++KEMI RG+ P+ TYT L++
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 474
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
+ ++A ++ M G P+ NILI CKA + + R M +
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 534
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
+ +Q F E G L++ + L
Sbjct: 535 DTVTYNTLIQGF---------------------------CEL------GKLNVAKELFQE 561
Query: 300 LLKKK---NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
++ +K N+V LL G+ CD+ + AL FE K +
Sbjct: 562 MVSRKVPPNIVTYKILLDGL-------------------CDNGESEKALEIFEKIEKSKM 602
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAK 416
L+ Y +I + + ++ + G GV ++I L A
Sbjct: 603 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 662
Query: 417 IFSLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
+F + ED TY LI + G A K++K+ + + R G T +++
Sbjct: 663 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 162/406 (39%), Gaps = 63/406 (15%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
+ ++ + ++ D + + ++M+LK + + + + ++ A +
Sbjct: 187 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 246
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+I+ G PN T++ L+ L G+ EALE+ +M E G +PD N L+ C +G+
Sbjct: 247 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 306
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+L++ M VE+
Sbjct: 307 EAEAMLLIDKM----------------------------------------------VEY 320
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAID-SLLSGIMDKSIQLDSAVISTIIEVNCDHRR 340
P ++ G VL ++ K A+ LL + +++I+LD+ S II+ C H
Sbjct: 321 GCQ----PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376
Query: 341 RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGAL 400
D A F + Y LIG + A+++ +M K + V ++
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436
Query: 401 LIHRLGSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTM 454
LI + A ++ + P+ T TYT+LI + DKA ++ M
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPD----TITYTSLIDGFCKENHLDKANQMVDLM 492
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEK-KSIQADALS 498
KG P++ TFN+L+ G K R+ D E++RK + + AD ++
Sbjct: 493 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 538
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 75/156 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SR + TY +LD + +FE +++ + +D Y ++H + NA VD
Sbjct: 564 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 623
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++ + LK P + +Y + L + EA ++++M + G P+ +TY +L+
Sbjct: 624 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 683
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ G +++++ +++ G D + ++I+
Sbjct: 684 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 719
>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 376
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ +G D Y M++ + ++ V M + G + Y ++++ L A
Sbjct: 119 IXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGAS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A+ ++ EM C PTIV+Y+ + L ++R EA D+ KEM+++GL P+ TY+
Sbjct: 179 KSEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L K E AL++++++ + G +PD NILI C +T+ + + Y+ N
Sbjct: 239 LLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSL--YLDMN 296
Query: 236 R 236
R
Sbjct: 297 R 297
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 75/152 (49%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
++ M+ + R+ + ++ELM++ G D++TY ++H G ++ ++++ E
Sbjct: 61 SFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIX 120
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ K ++Y + L ++++A V MIQ G PN + Y L+ L+ A K
Sbjct: 121 ERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKS 180
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
E+A+ +F +M P +ILI CK+
Sbjct: 181 EDAIRVFREMGFPHCSPTIVTYSILINGLCKS 212
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D TY ++ F + I+ ++ E+ + KG DA+ Y +++ L ++ A
Sbjct: 89 GYVEDSITYGILVHGFCKNGYINKSLHLLEIXERKGRXXDALAYXPMINGLCKETKLEKA 148
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
V++ M C P Y A + L + ++A V++EM P TY++L+
Sbjct: 149 VSVLNGMIQSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGFPHCSPTIVTYSILING 208
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
L ++ ++ EA ++ +M E G+ P ++L++ C
Sbjct: 209 LCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLC 245
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 3/178 (1%)
Query: 56 VSRSRGFNHDR---FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
V R GF H TY+ +++ +++R S + + M EKG+ +TY+ +M L
Sbjct: 186 VFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLC 245
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
V+ A+ +W ++ K P + + + L + + A +Y +M + PN
Sbjct: 246 LGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLV 305
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
T+ LME + G AL +++++ + +QPD + NI ++ C IL L
Sbjct: 306 THNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAILFLH 363
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLD-IFGEAKRISSMKYVFELMQEKGINIDAVTY 104
+EKA N + +S G + Y +++ + G +K +++ VF M + VTY
Sbjct: 145 LEKAVSVLNGMIQS-GCKPNTHVYNALINGLIGASKSEDAIR-VFREMGFPHCSPTIVTY 202
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
+ +++ L + A ++ +EM K P++++Y+ MK L L +V+ A ++ ++ +
Sbjct: 203 SILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTK 262
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
+G P+ + +L+ L K + AL ++ M P+ N L+E K G+ R
Sbjct: 263 KGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTLMEGFYKDGDIRN 322
Query: 225 IILILRYMKENRL 237
+++ + +N L
Sbjct: 323 ALVMWARILKNEL 335
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/412 (19%), Positives = 158/412 (38%), Gaps = 56/412 (13%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V++ + + ++ DAV Y ++++ AG + +WE M KE ++
Sbjct: 2 ESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMG-KEGSRSVA 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF N RV E +++ M + G + TY +L+ + G ++L +
Sbjct: 61 SFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIX 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEN 257
+ G D A +I CK + + +L M ++ V+ + A ++
Sbjct: 121 ERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKS 180
Query: 258 DSLLWQVH----PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
+ + P SP VT I L+ L K + L+
Sbjct: 181 EDAIRVFREMGFPHCSP---------TIVTYSI---------LINGLCKSERFSEAYDLV 222
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
+++K + S +++ C + + AL + K + + LI L +
Sbjct: 223 KEMLEKGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSV 282
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA 433
K H+L +YL ++R + V T+
Sbjct: 283 -------------AKTQHALSLYLD---MNRWNCSPNLV-----------------THNT 309
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
L+ ++ G AL ++ + + + P + ++N+ L GL R+SDA ++
Sbjct: 310 LMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAILF 361
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 11/221 (4%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQ--------VLKTHPPMEKAWLFFNWVSRS 59
++ K WD + LL+ + K T+N L M++A + RS
Sbjct: 388 LHSFCKNGMWDDTRALLEEMSAK--GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RS 444
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N D +Y T++ +++ +++FE + E+G+ + +TY +++H L G
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 504
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV + +EM L C +VSY +K + + V + + +EM ++G+ PN +Y +L+
Sbjct: 505 AVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILIS 564
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
L + + +ALE+ +M G+ PD N LI CK G
Sbjct: 565 ELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 169/450 (37%), Gaps = 84/450 (18%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
FT+ R + + M G DAV Y +V+H L + G V A + E
Sbjct: 176 FTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNE 235
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA-- 184
M L C + ++ ++ + RV+EA + M+ +G P TY L++ L R
Sbjct: 236 MLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQ 295
Query: 185 -----------------------------GKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
GK EA E++ M G QPD +IL+
Sbjct: 296 ADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHG 355
Query: 216 CCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQFSPEF 272
CK G + + +LR M++ A + L +F + D+ +LL ++
Sbjct: 356 LCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM-------- 407
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+ + +T + +G G++ L K + L+ + + D +TII
Sbjct: 408 -----SAKGLTLNSQG----YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTII 458
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C++ + + A FE ++ + Y +I L++ + + +EM G S
Sbjct: 459 YHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCS 518
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
L V +Y LI G+ D++L + +
Sbjct: 519 LDV---------------------------------VSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M KGI P+ ++N+L++ L K RV DA
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDA 575
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 93/175 (53%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF + TYT +L F + + + E M KG+ +++ Y +++ L G +D
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + +EM+ + C P I SY + L N++++EA +++ +++ G+ N TY ++
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+R G++++A+ + +M G D + N LI+ CK G +++L M E
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 147/363 (40%), Gaps = 38/363 (10%)
Query: 81 RISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT 140
+++ ++E M KG DA TY+ +MH L G + AV + EM+ K P +V+YT
Sbjct: 326 KLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYT 385
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ N + + +EM +GL N Y ++ L + G+ +EA+ + +M+
Sbjct: 386 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQ 445
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
G PD + N +I C + +M EN L T A D
Sbjct: 446 GCNPDICSYNTIIYHLCNNEQMEEA----EHMFENLLEEGVVANGITYNTIIHALLRDG- 500
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
WQ + + E I +++ V+ + GL+ + K N+ LL + +K
Sbjct: 501 RWQDAVRLAKEMILHGCSLDVVSYN---------GLIKAMCKDGNVDRSLVLLEEMAEKG 551
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I+ ++ + +I C RR AL + + L + Y LI L K+
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 381 EIVEEMTKAGHSLGVYL--------------------GALLIHRLGSARRPVPAAKIFSL 420
++E++ H+ V+ A+L++R +A PV +I +
Sbjct: 612 NLLEKL----HNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQI 667
Query: 421 LPE 423
LP+
Sbjct: 668 LPD 670
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 57/158 (36%), Gaps = 35/158 (22%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D +Y ++ + + + E M EKGI + V+Y ++ L V A
Sbjct: 516 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDA 575
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++M + +GL P+ TY L+
Sbjct: 576 LELSKQM-----------------------------------LNQGLAPDIVTYNTLING 600
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
L + G AL + K+ V PD NILI CK
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G D F Y T + S + E+M +GI+ D VTY + L +G++
Sbjct: 470 SKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLK 529
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +W +M P ++YT + R++EA D++ M+ GLPP+ TYTV +
Sbjct: 530 DAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFI 589
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
R G A F KM E GV+P++ N+LI C+ G T
Sbjct: 590 HAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRT 633
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TYT ++ E R+ + +F+ M G+ AVTYT +H G++
Sbjct: 540 SDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLY 599
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +++M + P V+Y + L R A + EM++RGL PN YTYT+L+
Sbjct: 600 SAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ + G +EEA+ ++S+M + G+ PD N L +
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFK 695
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 159/392 (40%), Gaps = 28/392 (7%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M+ +GI VTY +++H + +G+V+ A + EM+ P +++Y + +
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+KEA ++ ++ + GL P+ TY +L++ R G EEA +M E G QPD + I
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L+ K R + ++ + E + + LQ D + + S E
Sbjct: 448 LMNGSRK---VRNLAMVREFFDE--------MLSKGLQP-------DCFAYNT--RISAE 487
Query: 272 FI--SDNDAVEFVTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDS 325
I S ++A + I +S D I L K NL L ++ +Q D
Sbjct: 488 LILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDC 547
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
+ +I +C+ R A F+ + L Y I + ++
Sbjct: 548 ITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQK 607
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGS 443
M + G +LIH L R A + F + E TYT LI G+
Sbjct: 608 MLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGN 667
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++A+++Y M + GIHP T N L G ++
Sbjct: 668 WEEAIRLYSEMHQHGIHPDHCTHNALFKGFDE 699
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG + D TY LD ++ + ++ M G+ D +TYT ++H G +
Sbjct: 505 SRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLR 564
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A +I++ M + P+ V+YT ++ + A +++M++ G+ PN TY VL+
Sbjct: 565 EARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLI 624
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L R G+ A + F +M E G+ P+K +LI+ CK G I + M ++ +
Sbjct: 625 HALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGI- 683
Query: 239 LRYPVFKEALQTFKVADENDS 259
+P FK DE S
Sbjct: 684 --HPDHCTHNALFKGFDEGQS 702
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 164/427 (38%), Gaps = 35/427 (8%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEK--GINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
TY T+LD F R+ + M+ + G VTY V++ L+ G+++ A + +
Sbjct: 233 TYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVD 292
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
M++ + + ++ + F V++A + EM G+ P TY ++ + R+G
Sbjct: 293 RMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSG 351
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
E A F +M+ G+ PD N LI CKAG + + + +K LA
Sbjct: 352 NVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLA------- 404
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL---- 301
++ T+ + + L + +A F +E D IL+
Sbjct: 405 PSVLTYNILLDGYCRLGDL-----------EEARRFKQEMVEQGCQPDVSTYTILMNGSR 453
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K +NL + ++ K +Q D +T I A E + ++ +
Sbjct: 454 KVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTV 513
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH------RLGSARRPVPAA 415
Y + L K + +M G LIH RL AR
Sbjct: 514 TYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGM 573
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ L P TYT I Y G+ A ++ M +G+ P+ T+NVL+ L +
Sbjct: 574 LVSGLPPS----AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCR 629
Query: 476 LGRVSDA 482
+GR + A
Sbjct: 630 MGRTNLA 636
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G D TY ++++ + +A + ++F ++ G+ +TY ++ GD+
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A +EM + C P + +YT M + + + EM+ +GL P+C+ Y
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ + G EA ++ M G+ D NI ++ CK+G +
Sbjct: 484 ISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLK 529
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TYT +++ + + ++ ++ F+ M KG+ D Y + + G
Sbjct: 436 QGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSE 495
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + E M + V+Y ++ L + +K+A ++ +M+ GL P+C TYT L+
Sbjct: 496 AFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIH 555
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G+ EA +IF M +G+ P + I C+ G
Sbjct: 556 AHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRG 596
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 7/231 (3%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEA 79
A LL +L I ++S +N K E WLF + + G TY +LD +
Sbjct: 365 AMGLLPDL-ITYNSL-INGYCKAGNLKEALWLFGDL--KRAGLAPSVLTYNILLDGYCRL 420
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ + + M E+G D TYT +M+ ++ ++EM K P +Y
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
+ + EA + + MI RG+ + TY + ++ L ++G ++A ++ KM
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS 540
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEA 247
G+QPD LI C+ G R I M + L A+ Y VF A
Sbjct: 541 DGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA 591
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 133/372 (35%), Gaps = 33/372 (8%)
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
+ EM P I ++ L R + VY EM+Q G+ P+ TY L++ R
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243
Query: 184 AGKYEEALEIFSKMQ--EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
G+ ++A ++ +M+ G P N++I + GE ++ M+ ++ A +
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF 303
Query: 242 ---PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
P+ V L + P ++ N T I G
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYN-------TIIHG---------- 346
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ + N+ A + + D +++I C AL F + L
Sbjct: 347 -MFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAP 405
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y L+ +L + +EM + G V +L++ R + F
Sbjct: 406 SVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFF 465
Query: 419 ------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
L P+ C A Y I GS +A ++ + M +GI T+N+ L G
Sbjct: 466 DEMLSKGLQPD---CFA-YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521
Query: 473 LEKLGRVSDAEI 484
L K G + DA +
Sbjct: 522 LCKSGNLKDAYV 533
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
+AR + LLP+ TY +LI Y AG+ +AL ++ + R G+ PS+ T+
Sbjct: 355 AARMKFVEMRAMGLLPD----LITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTY 410
Query: 467 NVLLAGLEKLGRVSDAEIYRKE--KKSIQAD 495
N+LL G +LG + +A +++E ++ Q D
Sbjct: 411 NILLDGYCRLGDLEEARRFKQEMVEQGCQPD 441
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 414 AAKIFSLLPEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
AA++ + +K +A T+ LI YF+ GS +KA + M +GI P++ T+N ++ G
Sbjct: 287 AAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHG 346
Query: 473 LEKLGRVSDAEIYRKEKKSI 492
+ + G V A + E +++
Sbjct: 347 MFRSGNVEAARMKFVEMRAM 366
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 208/494 (42%), Gaps = 88/494 (17%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDI---FGEAKRISSMKYVFELMQEKG 96
L+ P + A+ +FN + S G++HD +TY ++ I +G ++++ S+ + E++++ G
Sbjct: 69 LRNEPSL--AFSYFNQLKES-GYSHDPYTYAAIVRILCFWGWSRKLDSI--LMEIIKKDG 123
Query: 97 INID--------------AVTYTSVMHWLSNA--------GDVDGAVNIWEEMKLKECYP 134
N+D A SV+ +S+A G D A ++ + K P
Sbjct: 124 -NLDFGIVNLFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAP 182
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
I+S M L + +V A +Y+++ GL PN YTYT+ ++ R G EA+++F
Sbjct: 183 QILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVF 242
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
M+E+GV P+ + IE C G + +L+ + ++ + + ++ F
Sbjct: 243 RDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSE 302
Query: 255 ---DENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
E +S+L ++ Q F+P D+ ++ G ++ NL+
Sbjct: 303 MKLKEAESILREMEKQGFAP--------------DVYVYCALISGYCMV----GNLLKAL 344
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+L ++ K ++ + ++S+I++ F+ KM + + Y ++ L
Sbjct: 345 ALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDAL 404
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
KL + E++ EM ++ VP
Sbjct: 405 CKLGKVEEAVELLVEM--------------------KGKKMVPD-------------IIN 431
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA--EIYRKE 488
YT +I YF G AL IY+ M G P + T+NVL G + G +A + E
Sbjct: 432 YTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYME 491
Query: 489 KKSIQADALSKDAV 502
+ ++ D ++ + +
Sbjct: 492 TQGVKPDTVTHNMI 505
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + +++L + S + F+ ++ GI D Y VM L G V+
Sbjct: 352 SKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVE 411
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV + EMK K+ P I++YT + FL +V +A ++Y+EM G P+ TY VL
Sbjct: 412 EAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLA 471
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
R G +EAL + + M+ GV+PD N++IE C G+
Sbjct: 472 GGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKV 515
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEKA FN + RG D TYT M++ + ++ +V M+ +GI D +TYT
Sbjct: 616 MEKAQYVFNMLV-DRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYT 674
Query: 106 SVMHWLSNAGDVD------------------GAVNIWEEMKLKECYPTIVSYTAYMKILF 147
+ L+N +D +W EMK + P ++ YT +
Sbjct: 675 VL---LNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHC 731
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+ +++A +++ EMI RGL P+ TYT L+ G ++A+ +F +M G++PD
Sbjct: 732 KTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAH 791
Query: 208 ACNIL 212
++L
Sbjct: 792 TMSVL 796
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 188/455 (41%), Gaps = 41/455 (9%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G N + +TYT + F ++ VF M+E G+ ++ +YT+ + L G
Sbjct: 211 KAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRS 270
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D + +++ + + +YT ++ ++KEA + +EM ++G P+ Y Y L
Sbjct: 271 DLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCAL 330
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ G +AL + +M GV+ + + +++ + G + + K+ +
Sbjct: 331 ISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGI 390
Query: 238 ALR---YPVFKEALQTFKVADENDSLLWQVH-PQFSPEFISDNDAVE--FVTTDIEGPLS 291
Y V +AL +E LL ++ + P+ I+ + F+ + L+
Sbjct: 391 FFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALN 450
Query: 292 IDQGLVLILLKKKNLVAID----------------SLLSGIMDKSIQLDSAVISTIIEVN 335
I + + I K ++V + SLL+ + + ++ D+ + IIE
Sbjct: 451 IYREMKDIG-HKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGL 509
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTA---YLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C + D A F+ NLE Y A++ + N K ++ ++K G
Sbjct: 510 CIGGKVDDAQAFFD-------NLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRI 562
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLP-----EDQKCTATYTALIGVYFSAGSADKA 447
L A LG+ + K LL Y+ +IG F AG +KA
Sbjct: 563 LK---KASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKA 619
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ + +G+ P + T+ +++ G ++ ++ +A
Sbjct: 620 QYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEA 654
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 76/151 (50%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
Y+ M++ + EA ++ + + ++G + ++ ++ L + GD + A+ + E M
Sbjct: 532 NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETM 591
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
PT++ Y+ + LF +++A V+ ++ RGL P+ TYT+++ R K
Sbjct: 592 VALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKM 651
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+EA + M+ G++PD +L+ C K
Sbjct: 652 KEAWHVLGDMKNRGIEPDVITYTVLLNNCSK 682
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 162/419 (38%), Gaps = 55/419 (13%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF D + Y ++ + + + + M KG+ + V +S++ LS G
Sbjct: 318 QGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASE 377
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
N ++E K + Y M L +V+EA ++ EM + + P+ YT ++
Sbjct: 378 VANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVIS 437
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
GK +AL I+ +M++ G +PD N+L + G T+ + +L YM+ +
Sbjct: 438 GYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGV-- 495
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
P+ ++ N +E + I G + Q
Sbjct: 496 -----------------------------KPDTVTHNMIIEGLC--IGGKVDDAQ----- 519
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ + +K ++ SA+++ E N H + ALL K L+
Sbjct: 520 -----------AFFDNLEEKCLENYSAMVNGYCEAN--HVNKAFALLI--RLSKQGRILK 564
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
+ ++ L+G L K ++E M + + + + +I L A A +F+
Sbjct: 565 KASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFN 624
Query: 420 LLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+L + TYT +I Y +A + M +GI P + T+ VLL K+
Sbjct: 625 MLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKI 683
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 160/354 (45%), Gaps = 29/354 (8%)
Query: 68 TYTTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY TM++ F + + S+MK V ++ + + D VTYT+++ G+++ A+ EE
Sbjct: 287 TYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEE 346
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M + C P +++Y A + L LN V EA + M GL N T+T +++ L GK
Sbjct: 347 MVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGK 406
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++A +M G++ D A +++ + CK G+ I +L+ MK + F
Sbjct: 407 LDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNA 466
Query: 247 ALQTFKVADEND--SLLWQVHPQF--SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
+ + + D L+ + Q +P F+S +T I+G +
Sbjct: 467 VFRILVESGKTDKAGLILRQMKQLGCTPNFLS-------YSTVIDG----------LCKA 509
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
K + ++ + + LD+++ S +++ C+ D A+ F + M + +
Sbjct: 510 KGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLES 569
Query: 363 YLALI-GILIKLNTFPKVAEIVEEMTKAGHSLGVY-----LGALLIHRLGSARR 410
+LA + G+ K F +V + EEM++ + ++ L L LG+ RR
Sbjct: 570 FLAFVKGLSAKEKAF-EVEKFFEEMSRRCPGIDIHKYRRILDEHLCKNLGNGRR 622
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 94/492 (19%), Positives = 193/492 (39%), Gaps = 55/492 (11%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRG----FNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
V QV+K+ A FFNW S ++H Y + D+ S+ + +
Sbjct: 117 VIQVIKSQKNPYHALFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQS 176
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ + + GD+ GA++ + K E + SY A + + +R
Sbjct: 177 HHR----LSDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANR 232
Query: 152 VKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
+ A V+ ++++ G + P+ TYT ++ + G E A +F +M G +P+ N
Sbjct: 233 IMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYN 289
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPV-FKEALQTFKVADENDSLLWQVHPQFS 269
+I CK G + + I+ M E + V + + + E + + ++
Sbjct: 290 TMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAM-----KYM 344
Query: 270 PEFISDNDAVEFVTTD--IEGPL---SIDQGLVLILLK-----KKNLVAIDSLLSGI--- 316
E +S N +T + I G ++D+ ++ K N+ S+L G+
Sbjct: 345 EEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVV 404
Query: 317 --MDKS-----------IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAY 363
+D + ++ D+ ++ C + D A+ + +N +++
Sbjct: 405 GKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSF 464
Query: 364 LALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPE 423
A+ IL++ K I+ +M + G + + +I L A+ + + F
Sbjct: 465 NAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFV---- 520
Query: 424 DQKC-------TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
D C + Y+ L+ Y G+AD A++++ M G +L +F + GL
Sbjct: 521 DDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAK 580
Query: 477 GRVSDAEIYRKE 488
+ + E + +E
Sbjct: 581 EKAFEVEKFFEE 592
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 4/228 (1%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D +T N ++ H ++KA F +SR RG TYT ++ + ++ +
Sbjct: 660 DVFTYNILINGHCKEGNVKKALEIFENMSR-RGVRATVVTYTALIYALSKKGQVQETDKL 718
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ +GI D V Y ++++ S +G++D A I EM+ K P V+Y M+ L L
Sbjct: 719 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 778
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
RV EA + EM +RG+ P+ TY L+ G ++AL I ++M G P
Sbjct: 779 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLT 838
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADE 256
N LI+ CK G+ +++ M EN + + ++ DE
Sbjct: 839 YNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 163/399 (40%), Gaps = 38/399 (9%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
T+ ++ L +AG A+ + +M P V+Y + RV+ A D+ +E
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 544
Query: 162 MIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKA 219
M +RG + PN YTY ++ + G+ +EA+++F +M G V+P+ N LI C
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604
Query: 220 GETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAV 279
G+ T +L M E +A+ + +LL VH F +A
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATY--------------NLL--VHALFMDG--RGTEAY 646
Query: 280 EFVTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
E V L+ D IL+ K+ N+ + + + ++ + +I
Sbjct: 647 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 706
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG- 394
+ F+ +V+ + + Y ALI + EI+ EM K +
Sbjct: 707 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 766
Query: 395 -----VYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALK 449
+ G L+ R+ AR+ + + P+ TY LI Y G AL+
Sbjct: 767 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD----LVTYNTLISGYSMKGDVKDALR 822
Query: 450 IYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
I M KG +P+L T+N L+ GL K G+ DAE KE
Sbjct: 823 IRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKE 861
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 4/233 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G D FTY +++ + + +FE M +G+ VTYT++++ LS G V
Sbjct: 654 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 713
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+++E + P +V Y A + + + A ++ EM ++ + P+ TY LM
Sbjct: 714 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 773
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE---N 235
L G+ +EA ++ +M E G+QPD N LI G+ + + I M N
Sbjct: 774 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 833
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTTDIE 287
L Y + L D+ ++++ + V +P+ + +E +TT+ E
Sbjct: 834 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 20 AQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIF 76
A +LL+ +P + ++ T N V+ + ++ A + G +++TY T++ +
Sbjct: 507 ALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGW 565
Query: 77 GEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
+ R+ VF+ M KG + +AV Y +++ + G +D A+ + M + T
Sbjct: 566 CKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMT 625
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+ +Y + LF++ R EA ++ +EM +GL P+ +TY +L+ + G ++ALEIF
Sbjct: 626 VATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE 685
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETR 223
M GV+ LI K G+ +
Sbjct: 686 NMSRRGVRATVVTYTALIYALSKKGQVQ 713
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG TY ++ R + + E M KG+ D TY +++ G+V
Sbjct: 620 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 679
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ I+E M + T+V+YTA + L +V+E ++ E ++RG+ P+ Y L+
Sbjct: 680 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 739
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTII 226
+G + A EI +M++ + PD N L+ C G E R +I
Sbjct: 740 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ + + ++ + + M E+G+ + TY ++H L G A + EEM
Sbjct: 594 YNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMG 653
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
K P + +Y + VK+A ++++ M +RG+ TYT L+ L + G+ +
Sbjct: 654 GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQ 713
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
E ++F + G++PD N LI +G I+ M++ R+A
Sbjct: 714 ETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 763
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
++ ++ + + +I CD + D ALL + V+ + + Y L+ L +
Sbjct: 587 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 646
Query: 381 EIVEEMTKAGHSLGVYLGALLIH---RLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
E+VEEM G + V+ +LI+ + G+ ++ A +IF + + TYTALI
Sbjct: 647 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK---ALEIFENMSRRGVRATVVTYTALI 703
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRK-EKKSIQ 493
G + K++ R+GI P L +N L+ G + A EI + EKK I
Sbjct: 704 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 763
Query: 494 ADALS 498
D ++
Sbjct: 764 PDDVT 768
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 146/363 (40%), Gaps = 59/363 (16%)
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK + P +VSY+ + L +++ + +EM +GL PN YTY ++ L ++GK
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
++A + +M G+ PD LI+ CK G + + M++ R+
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIV-------- 112
Query: 247 ALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNL 306
P+FI+ T I G L + +
Sbjct: 113 -----------------------PDFIA-------YTAVICG-----------LCRCGKM 131
Query: 307 VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLAL 366
+ D + + + + ++ D +T+I+ C + A V+ L Y AL
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191
Query: 367 IGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL---GSARRPV---PAAKIFSL 420
L KL E++ EM G L + L++ L G+ R+ V ++ +
Sbjct: 192 ADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251
Query: 421 LPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
P+ T T+T L+ Y G KA ++ + M +G+ P++ TFNVL+ G G +
Sbjct: 252 YPD----TITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307
Query: 481 DAE 483
D E
Sbjct: 308 DGE 310
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 181/433 (41%), Gaps = 55/433 (12%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D +Y+T+++ + + + + + MQ KG+ + TY S++ L +G VD
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + EM + P V YT + ++ A ++ EM ++ + P+ YT ++
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
L R GK EA ++F+KM GV+PD+ LI+ CK+GE + M ++ L
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 239 --LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ Y + L D + LL E ++ + L
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLH-----------------EMCGKGLQLNICTYNSL 226
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL-AFEYSVKMD 355
V L K N+ L+ + + D+ +T+++ C + G ++ A E +M
Sbjct: 227 VNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYC----KTGEMVKAHELLREM- 281
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L+R +I + +N F ++ ++E+ G L A ++ +
Sbjct: 282 --LDRGLQPTVITFNVLMNGFC-MSGMLED--------GERLLAWMLEK----------- 319
Query: 416 KIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
++P T TY +L+ Y + +IYK MC +G+ P T+N+L+ G K
Sbjct: 320 ---GIMPN----TTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372
Query: 476 LGRVSDAEIYRKE 488
+ +A KE
Sbjct: 373 ARNMKEAWFLHKE 385
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
MEKA+ N + +S G + TYT + D + ++ + + M KG+ ++ TY
Sbjct: 166 MEKAFSLHNQMVQS-GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYN 224
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+++ L +G++ AV + EEM++ YP +++T M + +A ++ +EM+ R
Sbjct: 225 SLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL P T+ VLM +G E+ + + M E G+ P+ N L+++ C R
Sbjct: 285 GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCT 344
Query: 226 ILILRYM 232
I + M
Sbjct: 345 TEIYKGM 351
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 144/349 (41%), Gaps = 23/349 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A+ F+ + + R D YT ++ ++ VF M +G+ D VTYT
Sbjct: 96 IQAAYKLFDEMEKQR-IVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYT 154
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ +G+++ A ++ +M P +V+YTA L +V A ++ EM +
Sbjct: 155 TLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGK 214
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL N TY L+ L ++G +A+++ +M+ AG+ PD L++ CK GE
Sbjct: 215 GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKA 274
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVA----DENDSLLWQVHPQFSPEFISDNDAVEF 281
+LR M + L F + F ++ D L W + P + N
Sbjct: 275 HELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS---- 330
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
L+ + N+ + G+ + + DS + +I+ +C R
Sbjct: 331 --------------LMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNM 376
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
A + + NL ++Y ++I K + E+ EEM + G
Sbjct: 377 KEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG T+ +++ F + + + + M EKGI + TY S+M ++
Sbjct: 284 RGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRC 343
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
I++ M + P +Y +K +KEA ++KEM ++G +Y +++
Sbjct: 344 TTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIK 403
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
+ K EA E+F +M+ G+ D N+ ++
Sbjct: 404 GFFKKKKISEARELFEEMRREGMAADAEIYNLFVD 438
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKG-----INIDAVTYTSVMHWLSNAG 115
G + TY +L F A +I F M+++G D V+YT+++H L AG
Sbjct: 227 GVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAG 286
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+D A +++EM + C P++ +Y A ++++ V++A V+ +M+++ PN TYT
Sbjct: 287 QLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYT 346
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
VL+ L GK + A+++ +M+ G +P N+LI + GE + + M +
Sbjct: 347 VLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERMSK 405
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRK 457
+IH LG A + A K+F + + CT ATY ALI V G+ + A+ ++ M RK
Sbjct: 278 IIHGLGVAGQLDKARKLFDEM-SKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRK 336
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDA 482
P++ T+ VL+ GL +G++ A
Sbjct: 337 DYMPNVVTYTVLIRGLCHVGKIDRA 361
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++ +I + E M+ +G TY ++ + G+++ A+ ++E M
Sbjct: 344 TYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERM 403
Query: 128 -KLKECYPTIVSYTAYMKILFLNDRVKE---ATDVYKEMIQRGLPPNCYTYTVLMEYLVR 183
K ++C P +Y + +F+ R ++ A + EM++RG P + ++ L+
Sbjct: 404 SKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERGYLPRRFMLNRVLNGLML 463
Query: 184 AGKYEEALEIFSKMQE 199
G + + ++ +MQE
Sbjct: 464 TGNQQISRDLL-RMQE 478
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++R PP+ TY L + RA AL++ +M E+GV P K NI+++ +AG+
Sbjct: 189 LERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQ 247
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 423 EDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
+D+ C +YT +I AG DKA K++ M ++G PS+ T+N L+ + K G V
Sbjct: 264 KDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNV 323
Query: 480 SDA 482
DA
Sbjct: 324 EDA 326
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+ F + +G TYT ++D K + V +LM E G D VTY
Sbjct: 1822 VERAFRLFEEMV-DKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYN 1880
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ + AG +D A++++ EM + C P +V+Y + + +V+EA ++ EM R
Sbjct: 1881 MLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKAR 1940
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN TYT + + ++AG+ ++A +M++ G+ D + LI CK G+ +
Sbjct: 1941 GIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLV-DAISYVALISTICKLGKGKLG 1999
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADE 256
+LR M E FK L TF V E
Sbjct: 2000 FQLLREMLEKG-------FKPNLVTFNVVFE 2023
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 45/215 (20%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD----VDGA 120
D +TY +++ + R+ + + E+MQ + D VTY +++H L G+ V+ A
Sbjct: 1766 DIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERA 1825
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK--------------------------- 153
++EEM K PT V+YT + L RVK
Sbjct: 1826 FRLFEEMVDKGHTPTSVTYTVVIDALL---RVKMDEQAQKVLDLMHENGCAFDLVTYNML 1882
Query: 154 -----------EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
+A D++ EM RG P+ TY +++ +AGK EEA ++F++M+ G+
Sbjct: 1883 INRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGI 1942
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
P+ + + C KAG + L M++ L
Sbjct: 1943 FPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL 1977
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 1/189 (0%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQE 94
V VL +E FF W G+ H F + +L+ ++ + + + +
Sbjct: 1631 VVDVLNHARDVEPTIQFFEWCHGRHGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESKP 1690
Query: 95 KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKE 154
+A TY++++ G+ A+ + E MK E Y + L + + KE
Sbjct: 1691 SSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKE 1750
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
A D+ M P+ YTY +L+ L + G+ E+A + MQ D N LI
Sbjct: 1751 ALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIH 1810
Query: 215 KCCKAGETR 223
C+ G R
Sbjct: 1811 GLCRKGNGR 1819
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 152/363 (41%), Gaps = 32/363 (8%)
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIF-SKMQEAGVQPDKAACNILIEKCCKAGET 222
+ G + + L+E+LV +Y+ A ++ ++ + + Q + + ++ C+ GET
Sbjct: 1654 RHGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGET 1713
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDNDA 278
R + +L +MK+ + ++ L K + D L +P+ + N
Sbjct: 1714 RQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNIL 1773
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKK---NLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
+ + G L QGLV ++ ++ ++V ++L+ G+ K
Sbjct: 1774 INALCK--VGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRK---------------G 1816
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
R + A FE V Y +I L+++ + ++++ M + G + +
Sbjct: 1817 NGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDL 1876
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYK 452
+LI+R A A +F +P + C TY +++ + AG ++A K++
Sbjct: 1877 VTYNMLINRFAKAGMMDKAMDLFVEMPT-RGCIPDVVTYNSIVDGFCKAGKVEEANKLFA 1935
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE-KKSIQADALSKDAVPMEEKICDL 511
M +GI P+ T+ + K GR+ DA Y E +K DA+S V + IC L
Sbjct: 1936 EMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISY--VALISTICKL 1993
Query: 512 LYG 514
G
Sbjct: 1994 GKG 1996
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 5/186 (2%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGE 78
DL+ +D T N ++ M+KA F + +RG D TY +++D F +
Sbjct: 1865 DLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMP-TRGCIPDVVTYNSIVDGFCK 1923
Query: 79 AKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVS 138
A ++ +F M+ +GI + TYTS+ AG + A EM+ KE +S
Sbjct: 1924 AGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMR-KEGLVDAIS 1982
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y A + + + K + +EM+++G PN T+ V+ E L + ++A + +++
Sbjct: 1983 YVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELR 2042
Query: 199 EAGVQP 204
+ P
Sbjct: 2043 QQHSSP 2048
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 157/413 (38%), Gaps = 34/413 (8%)
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYP-TIVSYTAYMKILFLNDRVKEATDVY-KEMIQ 164
V+ L++A DV+ + +E + Y T ++ ++ L + K A + E
Sbjct: 1631 VVDVLNHARDVEPTIQFFEWCHGRHGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESKP 1690
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
N +TY+ ++ G+ +AL + M++A V + NI++ CK G+ +
Sbjct: 1691 SSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKE 1750
Query: 225 IILILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVHPQFSP-EFISDNDAVE 280
+ +L M A Y + AL ++ L+ + + P + ++ N +
Sbjct: 1751 ALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIH 1810
Query: 281 FVTTDIEGPLSIDQGLVLI--LLKKKNL-------VAIDSLLSGIMDKSIQLDSAVISTI 331
+ G +++ L ++ K + V ID+LL MD+ Q V+ +
Sbjct: 1811 GLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQ---KVLDLM 1867
Query: 332 IEVNCDHRRRDGALLAFEYSVK------MDLNLER---------TAYLALIGILIKLNTF 376
E C +L ++ MDL +E Y +++ K
Sbjct: 1868 HENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKV 1927
Query: 377 PKVAEIVEEMTKAG-HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALI 435
+ ++ EM G G ++ L + R A + + E +Y ALI
Sbjct: 1928 EEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVALI 1987
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
G ++ + M KG P+L TFNV+ L K DA+I +E
Sbjct: 1988 STICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQE 2040
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 94/173 (54%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ T+ T++D F + + +++ K FE MQ++G+ + VTY S+++ L N G ++ A+++W
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLW 331
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M P IV+Y A + +KEAT V+ ++ ++ L PN T+ +++ +
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKE 391
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
G EE + S M + G+ P+ + N LI C+ + + +L M+ L
Sbjct: 392 GMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 111/556 (19%), Positives = 212/556 (38%), Gaps = 66/556 (11%)
Query: 4 TISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFN 63
+I + ++L W +L +L + + ++Q+L E FF W + +
Sbjct: 19 SIPTISELLSKQHW---SELKPHLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLS 75
Query: 64 HDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNI 123
+ + +L +KR S ++ + + + T +SV H L G GA +
Sbjct: 76 YGLEPTSKVLHFLANSKRYSKVRSFLDSF----VKNEKHTVSSVFHSLLLDGGRPGATAL 131
Query: 124 WEEM---------KLKECYP------------TIVSYTAYMKILFLNDRVKEATDVYKEM 162
+M +L Y ++ S + L +++ + VYKEM
Sbjct: 132 IIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEM 191
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
I+R + N T+ + + L RAGK +A + M+ G+ P+ N L++ CK G
Sbjct: 192 IKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSA 251
Query: 223 RTIILILRYMKE---NRLALRYPVFKEALQTFKVADENDSLLWQVHPQ-----FSPEFIS 274
+ +MKE N++ F + F DEN + + + P ++
Sbjct: 252 GKMYKAEAFMKEMLANKICPNEVTFNTLIDGF-CKDENVAAAKKAFEEMQKQGLKPNIVT 310
Query: 275 DNDAVEFVTTDIEGPLSIDQGLVLILLK-KKNLVAIDSLLSGIMDKSIQLDSAVI----- 328
N + + + + +ID ++ L K N+V ++L++G K + ++ +
Sbjct: 311 YNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVS 370
Query: 329 -----------STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+T+I+ C + + + + Y LI L +
Sbjct: 371 KQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQ 430
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCTATY 431
E++ EM G V +LI L + A K+ + L P TY
Sbjct: 431 AAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNH----VTY 486
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE--K 489
L+ Y G AL + M ++ P++ T+NVL+ G K+ ++ A E +
Sbjct: 487 NTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLE 546
Query: 490 KSIQADALSKDAVPME 505
K + + + D V +E
Sbjct: 547 KGLNPNRTTYDIVRLE 562
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G D TY ++D + + + + + M G+ + VTY ++M G +
Sbjct: 441 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK 500
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+N+ M+ + P +V+Y +K ++++ A + EM+++GL PN TY ++
Sbjct: 501 AALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVR 560
Query: 179 EYLVRAG 185
++ G
Sbjct: 561 LEMLEKG 567
>gi|255661002|gb|ACU25670.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 376
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
++ +G D F Y+ M++ + + V M + G +A Y ++++ L A
Sbjct: 119 MAZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVYNTLINGLVGAS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A+ ++ EM C PTI++Y + L N+ EA D+ K+M+++GL P+ TY+
Sbjct: 179 KFEDAIRVFREMGXVRCSPTIITYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+LM+ L K E AL++++++ G +PD NILI C G+T+ + + M
Sbjct: 239 MLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRW 298
Query: 236 RLALRYPVFKEALQTF-KVADENDSL-LW--QVHPQFSPEFISDN 276
+ A ++ F K D ++L +W + P+ IS N
Sbjct: 299 KCAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYN 343
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W N ++ M+ + ++ + ++ELM++ D++T+ ++H
Sbjct: 48 WEMMGNEGNRSVSSFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVHGFCKN 107
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G ++ ++++ E + K +Y+A + L + +A V +MI+ G PN + Y
Sbjct: 108 GYINKSLHVLEMAZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDMIKSGCKPNAHVY 167
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
L+ LV A K+E+A+ +F +M P N LI CK
Sbjct: 168 NTLINGLVGASKFEDAIRVFREMGXVRCSPTIITYNTLINGLCK 211
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ + + + + M EKG+N +TY+ +M L V+ A+ +W ++
Sbjct: 201 TYNTLINGLCKNEMFGEAYDLVKDMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQV 260
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + + + L + + A +Y +M + PN T+ LME + G
Sbjct: 261 ISKGFKPDVQMHNILIHGLCSVGKTQLALSLYFDMNRWKCAPNLVTHNTLMEGFYKDGDI 320
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
AL I+++ G++PD + NI ++ C IL L
Sbjct: 321 RNALVIWARXLRNGLEPDIISYNITLKGLCSCNRICDAILFLH 363
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/409 (19%), Positives = 161/409 (39%), Gaps = 58/409 (14%)
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+GD+DG +++E+ + P V + A + F ++K+ ++++ M G + +
Sbjct: 3 SGDIDGPERVYKEIVESKVSPDAVVHNAMLNGYFRVAKIKDCFELWEMMGNEG-NRSVSS 61
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ ++M L GK +E + I+ M+++ D IL+ CK G + +L M
Sbjct: 62 FNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLE-MA 120
Query: 234 ENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID 293
Z + + L F + + L + + + ++D I
Sbjct: 121 ZXKGGV--------LDAFAYSAMINGLCKEANLDKAVXVLND---------------MIK 157
Query: 294 QGLVLILLKKKNLVAIDSLLSGIMDKS--------------IQLDSAVIS--TIIEVNCD 337
G K N ++L++G++ S ++ +I+ T+I C
Sbjct: 158 SGC------KPNAHVYNTLINGLVGASKFEDAIRVFREMGXVRCSPTIITYNTLINGLCK 211
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+ A + ++ LN Y L+ L + + ++ ++ G V +
Sbjct: 212 NEMFGEAYDLVKDMLEKGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQM 271
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTM 454
+LIH L S + A ++ + KC T+ L+ ++ G AL I+
Sbjct: 272 HNILIHGLCSVGKTQLALSLYFDMNR-WKCAPNLVTHNTLMEGFYKDGDIRNALVIWARX 330
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
R G+ P + ++N+ L GL R+ DA ++ DA+ K VP
Sbjct: 331 LRNGLEPDIISYNITLKGLCSCNRICDAILFLH-------DAVRKKIVP 372
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/147 (17%), Positives = 65/147 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G N TY+ ++ ++ ++ + KG D + ++H L + G
Sbjct: 228 KGLNPSVITYSMLMKGLCLDHKVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQL 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A++++ +M +C P +V++ M+ + + ++ A ++ ++ GL P+ +Y + ++
Sbjct: 288 ALSLYFDMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARXLRNGLEPDIISYNITLK 347
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDK 206
L + +A+ + P K
Sbjct: 348 GLCSCNRICDAILFLHDAVRKKIVPTK 374
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I + V++ + E ++ DAV + ++++ + +WE M E ++
Sbjct: 2 ESGDIDGPERVYKEIVESKVSPDAVVHNAMLNGYFRVAKIKDCFELWEMMG-NEGNRSVS 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF +V E +++ M + + T+ +L+ + G ++L +
Sbjct: 61 SFNIMMRGLFDKGKVDEVISIWELMKKSDFVEDSITFGILVHGFCKNGYINKSLHVLEMA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
Z G D A + +I CK + +L M
Sbjct: 121 ZXKGGVLDAFAYSAMINGLCKEANLDKAVXVLNDM 155
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 106/214 (49%), Gaps = 7/214 (3%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D Y + G+ K++S M +++ M+ G+ D TY ++ G VD
Sbjct: 176 KGITTDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDK 235
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++EEM C P +++Y + + L N + EA ++K+M ++G P+ +TY++L+E
Sbjct: 236 ASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIE 295
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
++ K + A +F +M G P+ NIL++ + G+TR + +K+ LA
Sbjct: 296 CFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGKTREAHKLYETLKQQGLAP 355
Query: 239 --LRYPVFK----EALQTFKVADENDSLLWQVHP 266
+ Y + + + +T ++ + + W + P
Sbjct: 356 DSITYSILERLESRSQRTARIRKPSRTTGWVISP 389
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 84/155 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D FTY M+ FG + +FE M + D +TY S+++ L GD+
Sbjct: 209 KANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDL 268
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++++M+ K P + +Y+ ++ +++V A ++ EMI +G PN TY +L
Sbjct: 269 DEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNIL 328
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++ L R GK EA +++ +++ G+ PD +IL
Sbjct: 329 LDCLERHGKTREAHKLYETLKQQGLAPDSITYSIL 363
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 167/414 (40%), Gaps = 59/414 (14%)
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M++ + DA TYT ++ AG V+ EEM K C +++Y ++ L N
Sbjct: 1 MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKM 60
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
V +A + +MI+ PN +TY+++++ L G+ EI + +++ +
Sbjct: 61 VDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEI---LDICSGHLNRSVYSY 117
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPE 271
L++ CK+G + VF + + D D+ + + + E
Sbjct: 118 LVKALCKSGHASE---------------AHSVFCRMWSSHEKGDR-DAFVSMLEALCNAE 161
Query: 272 FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTI 331
+ +A++ + E ++ D G+ I+ + S +S + DK
Sbjct: 162 KTA--EAIDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDK------------ 207
Query: 332 IEVNCDHRRRDG-ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ +G A F Y++ +I ++ K +E+ EEM +
Sbjct: 208 -------MKANGVAPDVFTYNI-------------MISSFGRVGLVDKASELFEEMDDSS 247
Query: 391 HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKAL 448
V +I+ LG A +F + E TY+ LI + + D A
Sbjct: 248 CKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMAC 307
Query: 449 KIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
++ M +G P++ T+N+LL LE+ G+ +A K ++++ L+ D++
Sbjct: 308 SLFDEMIAQGCVPNIVTYNILLDCLERHGKTREA---HKLYETLKQQGLAPDSI 358
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D +TYT ++ + G+A + + E M KG ++ + Y +V+ L VD A+ +
Sbjct: 9 DAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAIFML 68
Query: 125 EEMKLKECYPTIVSYTAYMKILFLN---DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+M +C P +Y+ + +L R+ E D+ + R + Y+ L++ L
Sbjct: 69 SKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHLNRSV------YSYLVKAL 122
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++G EA +F +M + + D+ A ++E C A +T I +L M E
Sbjct: 123 CKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPE 175
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 39/203 (19%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFN-WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
SY V + K+ E +F W S +G DR + +ML+ A++ + + +
Sbjct: 116 SYLVKALCKSGHASEAHSVFCRMWSSHEKG---DRDAFVSMLEALCNAEKTAEAIDLLHM 172
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M EKGI D Y + L KLK+ VS+
Sbjct: 173 MPEKGITTDVGMYNIIFSALG---------------KLKQ-----VSFM----------- 201
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+ +Y +M G+ P+ +TY +++ R G ++A E+F +M ++ +PD N
Sbjct: 202 ----SSLYDKMKANGVAPDVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNS 257
Query: 212 LIEKCCKAGETRTIILILRYMKE 234
+I K G+ ++ + M+E
Sbjct: 258 MINCLGKNGDLDEAHMLFKDMQE 280
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 86/209 (41%), Gaps = 5/209 (2%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
D+YT +++ KA F +++ S+G + Y T+++ G+ K + ++
Sbjct: 9 DAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKMVDKAIFML 68
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
M E + TY+ ++ L+ G + + E + + + Y+ +K L +
Sbjct: 69 SKMIESDCQPNQFTYSIMLDVLATGGQLH---RLNEILDICSGHLNRSVYSYLVKALCKS 125
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
EA V+ M + + ++E L A K EA+++ M E G+ D
Sbjct: 126 GHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITTDVGMY 185
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLA 238
NI+ K + + + MK N +A
Sbjct: 186 NIIFSALGKLKQVSFMSSLYDKMKANGVA 214
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 190/476 (39%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E Y LI K+ + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKVGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P A K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPXIEYLCNNGQAXKAETLVRQLXKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRGXS-QEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 458
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V + ++ KS
Sbjct: 165 KVETXNRFFEDMKS 178
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 174/422 (41%), Gaps = 60/422 (14%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+T +L++ + K+ + + + +Q G++ D T +M+ + A + ++
Sbjct: 74 FTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLM 133
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P I ++T+ + L +R++EA + +M++ G+ P+ YT +++ L + G +
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVD 193
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
AL +F++M+ G++PD L+ C +G R L+LR M + ++
Sbjct: 194 NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKI----------- 242
Query: 249 QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
P+ I+ N L+ +K+ L+
Sbjct: 243 --------------------KPDVITFN------------------ALIDAFVKEGKLLD 264
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
L + ++ SI + +++I C R D A F + AY +LI
Sbjct: 265 AKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLIN 324
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-----PE 423
K +I EM++ G + LI G +P A ++F + P
Sbjct: 325 GFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPP 384
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRK---GIHPSLGTFNVLLAGLEKLGRVS 480
+ + TY L+ G +KAL I++ M ++ G+ P++ T+NVLL GL G++
Sbjct: 385 NIR---TYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLE 441
Query: 481 DA 482
A
Sbjct: 442 KA 443
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 40/281 (14%)
Query: 11 ILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHD 65
I K +D +L K+L I D YT N ++ + L +++ + GF D
Sbjct: 81 IAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPD 140
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
FT+T++++ F RI + M E GI D V YT+++ L G VD A++++
Sbjct: 141 IFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFN 200
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDR------------------------------VKE- 154
+M+ P +V YT+ + L + R VKE
Sbjct: 201 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEG 260
Query: 155 ----ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACN 210
A ++Y EMIQ + PN +TYT L+ L G+ +EA ++F M+ G PD A
Sbjct: 261 KLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYT 320
Query: 211 ILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
LI CK + + I M + L + +Q F
Sbjct: 321 SLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGF 361
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
R D T+ ++D F + ++ K ++ M + I + TYTS+++ L G +D
Sbjct: 240 RKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDE 299
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ M+ K C+P +V+YT+ + +V++A ++ EM Q+GL N TYT L++
Sbjct: 300 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQ 359
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
GK A E+F M GV P+ N+L+ C G+ ++I M++ +
Sbjct: 360 GFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI 417
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
++ ++G D YT++++ F + K++ +F M +KG+ + +TYT+++
Sbjct: 305 YLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLV 364
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR---GLPPNC 171
G + A ++ M + P I +Y + L N +V +A ++++M +R G+PPN
Sbjct: 365 GKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNI 424
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
TY VL+ L GK E+AL +F MQ+ + I+I+ CKAG+ +
Sbjct: 425 RTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVK 476
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F +S+ +G + TYTT++ FG + + + VF M +G+ + TY
Sbjct: 332 VEDAMKIFYEMSQ-KGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYN 390
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKE---CYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
++H L G V+ A+ I+E+M+ +E P I +Y + L N ++++A V+ +M
Sbjct: 391 VLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDM 450
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
+R + TYT++++ + +AGK ++AL +F + GV+P+ +I + G
Sbjct: 451 QKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLM 510
Query: 223 RTIILILRYMKENRLA 238
++ R MKE+ ++
Sbjct: 511 LEAHVLFRKMKEDGVS 526
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/420 (18%), Positives = 161/420 (38%), Gaps = 59/420 (14%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
+ +T +++ ++ D +N+ + +++ + + M + + A+ +
Sbjct: 72 IDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGK 131
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+++ G P+ +T+T L+ + EEA+ + ++M E G++PD +I+ CK G
Sbjct: 132 LMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGH 191
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEF 281
+ + M+ + + P D V +
Sbjct: 192 VDNALSLFNQMEN---------------------------YGIRP----------DVVMY 214
Query: 282 VTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
+ LV L D LL G+M + I+ D + +I D +
Sbjct: 215 TS------------LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI----DAFVK 258
Query: 342 DGALL----AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
+G LL + ++M + Y +LI L + ++ M G V
Sbjct: 259 EGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVA 318
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMC 455
LI+ ++ A KIF + + T TYT LI + G + A +++ M
Sbjct: 319 YTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMV 378
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGG 515
+G+ P++ T+NVLL L G+V+ A + ++ + + D + + + L Y G
Sbjct: 379 SRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNG 438
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 198/488 (40%), Gaps = 34/488 (6%)
Query: 16 TWDSAQDLLKNL---PIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTY 69
+WD +LL + ++ D +T + V+ +++A F + + G+ TY
Sbjct: 266 SWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAEL-KFNGYKPGTVTY 324
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+ML +FG+A + + + M++ D+VTY + AG +D + + + M
Sbjct: 325 NSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTS 384
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
K P ++YT + R +A ++ M G PN YTY ++ L + + E+
Sbjct: 385 KGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTED 444
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
+++ +M+ G P++A N ++ C + G+ + +LR MK F +
Sbjct: 445 VIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLIS 504
Query: 250 TF-KVADENDSLLW---QVHPQFSPEFISDN------------DAVEFVTTDI--EGPLS 291
+ + E DS V F+P + N A E V D+ +G
Sbjct: 505 AYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKP 564
Query: 292 IDQGLVLILL---KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
+ L+L K N+ I+ + I D + ++ T++ N R G AF
Sbjct: 565 NENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAF 624
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RL 405
+ K + +++ + + F K E++ + + G ++ L+ R
Sbjct: 625 DQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVRE 684
Query: 406 GSARRPVPAAK-IFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
G + K I + PE +Y +I + G +A+ + M KGI P++
Sbjct: 685 GECWKAEEVLKGIQNSGPEPD--VVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIV 742
Query: 465 TFNVLLAG 472
T+N L+G
Sbjct: 743 TYNTFLSG 750
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 107/481 (22%), Positives = 189/481 (39%), Gaps = 77/481 (16%)
Query: 47 EKAWLFFNW----VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
E+A L F W + D M+ I G + S +F+L+ + ++D
Sbjct: 157 ERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVR 216
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDV 158
YT+++H + G A++++ +MK PT+V+Y Y K+ DR+ E D
Sbjct: 217 AYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLD- 275
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
EM +GL + +T + ++ R G +EA + ++++ G +P N +++ K
Sbjct: 276 --EMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGK 333
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
AG ++ EAL K ++N+ P+ ++ N
Sbjct: 334 AG----------------------IYTEALSILKEMEDNNC---------PPDSVTYN-- 360
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS-GIMDKSIQLDSAVISTIIEVNCD 337
E T + +D+G+ + ID++ S G+M +I +T+I+
Sbjct: 361 -ELAATYVRAGF-LDEGMAV----------IDTMTSKGVMPNAI-----TYTTVIDAYGK 403
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
R D AL F + Y +++ +L K + V +++ EM G +
Sbjct: 404 AGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNR-- 461
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQKC-----TATYTALIGVYFSAGSADKALKIYK 452
A L + +L E + C T+ LI Y GS + K+Y
Sbjct: 462 -ATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYG 520
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLL 512
M + G P + T+N LL L + G AE S+ D +K P E LL
Sbjct: 521 EMVKSGFTPCVTTYNALLNALARRGDWKAAE-------SVIQDMRTKGFKPNENSYSLLL 573
Query: 513 Y 513
+
Sbjct: 574 H 574
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + FTY ++D++ + V + +Q G D V+Y +V+ G + A
Sbjct: 666 GLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEA 725
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + EM K PTIV+Y ++ + EA +V + MI+ P+ TY +L++
Sbjct: 726 IGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDG 785
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPD 205
+AGKYEEA++ SK++E + D
Sbjct: 786 YCKAGKYEEAMDFVSKIKELDISFD 810
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G+ D +ML +F K S + + + E G+ + TY +M G+ A
Sbjct: 631 GYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKA 690
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + ++ P +VSY +K ++EA V EM +G+ P TY +
Sbjct: 691 EEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSG 750
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++EA E+ M E +P + IL++ CKAG+ + + +KE
Sbjct: 751 YAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKE 804
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 87/157 (55%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +++D + K+++ K +F +M ++G+ D +Y+ +++ VD A+ ++
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLF 361
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EEM K+ +P +V+Y + + L + R A ++ EM RG P N TY +++ + +
Sbjct: 362 EEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKN 421
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++A+ + +K++E G+QPD +LI CK G
Sbjct: 422 NHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/470 (20%), Positives = 198/470 (42%), Gaps = 21/470 (4%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHD 65
+LK + +A L + + IK D T N ++ + F+ ++ +G++ D
Sbjct: 68 LLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPD 127
Query: 66 RFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWE 125
T+T ++ + Y + + +G +D V+Y ++++ L G+ AV +
Sbjct: 128 AVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLR 187
Query: 126 EMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
+ K P +V Y+ + + + V +A D+Y EM+ + + P+ TY+ L+ G
Sbjct: 188 RVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVG 247
Query: 186 KYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFK 245
K + A+++F++M + P+ +ILI+ CK G+ R +L M + + L +
Sbjct: 248 KLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYN 307
Query: 246 EALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKN 305
+ + L+ QV+ S + + A VT D+ + G I + +
Sbjct: 308 SLMDGY-------CLVKQVNKAKS---LFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEA 357
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLA 365
+ L + K I + +++++ C R AL + Y +
Sbjct: 358 M----KLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413
Query: 366 LIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPE 423
++ + K N K ++ ++ + G ++ +LI+ L R A K+F L+
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
TYT+LI + + G D+ L + M G P+ T+ +L+ L
Sbjct: 474 YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSL 523
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 114/233 (48%), Gaps = 4/233 (1%)
Query: 29 IKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
+K D T N ++ + + KA FN +++ RG D ++Y+ M++ F + K +
Sbjct: 299 VKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQ-RGVTPDVWSYSIMINGFCKIKMVDEA 357
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+FE M K I + VTY S++ L +G A+ + +EM + I++Y + +
Sbjct: 358 MKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDA 417
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ N+ V +A + ++ ++G+ P+ +TYTVL+ L + G+ ++A ++F + G P+
Sbjct: 418 ICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPN 477
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
LI C G + +L MK+N ++ + + DEND
Sbjct: 478 IYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDEND 530
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 175/419 (41%), Gaps = 32/419 (7%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSV 107
L+F+ ++GF D+ +Y T+++ R+ K +L++ K + + V Y+++
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLC---RVGETKAAVQLLRRVDGKLVRPNVVMYSTI 204
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + V+ A +++ EM K P +V+Y++ + + ++K A D++ MI +
Sbjct: 205 IDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNI 264
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
PN YT+++L++ + GK EA + + M + V+ D N L++ C +
Sbjct: 265 NPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKS 324
Query: 228 ILRYMKENRLA---LRYPVFKEALQTFKVADENDSLLWQVH-PQFSPEFISDNDAVEFVT 283
+ M + + Y + K+ DE L ++H Q P ++ N V+ +
Sbjct: 325 LFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLC 384
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDG 343
+++ L+ + D+ + ++I++ C + D
Sbjct: 385 KSGRTSCALE------------------LVDEMHDRGQPSNIITYNSILDAICKNNHVDK 426
Query: 344 ALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH 403
A++ + + + Y LI L K+ ++ E++ G+S +Y LI+
Sbjct: 427 AIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLIN 486
Query: 404 RLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ + S + +D C TY LI F DKA K+ + M +G+
Sbjct: 487 GFCNKGFFDEGLAMLSKM-KDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 178/406 (43%), Gaps = 23/406 (5%)
Query: 101 AVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYK 160
A+ + ++ L A A+++ ++M+ P ++ M +K + V+
Sbjct: 58 AIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFA 117
Query: 161 EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+++++G P+ T+T+L++ L G+ +AL K+ G Q D+ + LI C+ G
Sbjct: 118 KILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVG 177
Query: 221 ETRTIILILRYMKENRL---ALRYPVFKEALQTFK-VADENDSLLWQVHPQFSPEFISDN 276
ET+ + +LR + + + Y +++ K V D D V + SP+ ++ +
Sbjct: 178 ETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYS 237
Query: 277 D-------------AVEFVTTDIEGPLSIDQGLVLILL----KKKNLVAIDSLLSGIMDK 319
AV+ I ++ + IL+ K+ + ++L+ +M K
Sbjct: 238 SLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKK 297
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
+++LD +++++ C ++ + A F + + + +Y +I K+ +
Sbjct: 298 NVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEA 357
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGV 437
++ EEM V L+ L + R A ++ + + + + TY +++
Sbjct: 358 MKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDA 417
Query: 438 YFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
DKA+ + + KGI P + T+ VL+ GL K+GR+ DA+
Sbjct: 418 ICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/336 (18%), Positives = 137/336 (40%), Gaps = 33/336 (9%)
Query: 158 VYKEMIQRGLP-PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
++ ++ + P P + ++ L++A +Y+ AL + +M+ G++PD CN+L+
Sbjct: 44 LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQ--------TFKVADENDSLLWQVHPQF 268
+ G + + VF + L+ TF + + L +VH
Sbjct: 104 SQLGHIK---------------FSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKAL 148
Query: 269 SPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVI 328
+ D + D ++ GL + K A LL + K ++ + +
Sbjct: 149 ---YFHDKVVAQGFQLDQVSYGTLINGLCRVGETK----AAVQLLRRVDGKLVRPNVVMY 201
Query: 329 STIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
STII+ C + + A + V ++ + Y +LI + ++ M
Sbjct: 202 STIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMIS 261
Query: 389 AGHSLGVYLGALLIHRLGSARRPVPAAKIFS-LLPEDQKC-TATYTALIGVYFSAGSADK 446
+ VY ++LI + A + + ++ ++ K TY +L+ Y +K
Sbjct: 262 DNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNK 321
Query: 447 ALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A ++ M ++G+ P + ++++++ G K+ V +A
Sbjct: 322 AKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEA 357
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 143/356 (40%), Gaps = 26/356 (7%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P + + + L + + A + ++M G+ P+ T +LM + G + + +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-- 251
F+K+ + G PD ILI+ C GE + Y + +A + + + + T
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKAL----YFHDKVVAQGFQLDQVSYGTLIN 171
Query: 252 ---KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
+V + ++ Q+ + + + N V +T I+ + K K +
Sbjct: 172 GLCRVGETKAAV--QLLRRVDGKLVRPN--VVMYSTIIDS-----------MCKDKLVND 216
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
L ++ K I D S++I C + A+ F + ++N + LI
Sbjct: 217 AFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILID 276
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT 428
K + ++ M K L V L+ ++ A +F+++ +
Sbjct: 277 GFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTP 336
Query: 429 A--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+Y+ +I + D+A+K+++ M K I P++ T+N L+ GL K GR S A
Sbjct: 337 DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCA 392
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 167/417 (40%), Gaps = 20/417 (4%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ ++L G A + M +F M+E + D VTY +++ L AG V A+ +
Sbjct: 130 DVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVL 189
Query: 125 EEMKL--KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR--GLPPNCYTYTVLMEY 180
+ M + IV + L R+++A E +++ G PN TY L +
Sbjct: 190 DRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADA 249
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
R G + A +I +M++ GV P+ N ++ C+ G + R + L R
Sbjct: 250 CCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEAR 309
Query: 241 -YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI 299
V L + + N +L ++ + + + DAV + T ++
Sbjct: 310 GNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPP-DAVMYFT------------MISG 356
Query: 300 LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
L + LV ++ + + +LD + +I C +R A FE L +
Sbjct: 357 LTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPD 416
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y L+ L K F V E++ M G V L+H A + A KIF
Sbjct: 417 VYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFR 476
Query: 420 LLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
+ E Q T Y LI + D A+K++ M + ++ T+N LL GL+
Sbjct: 477 SMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQ 533
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 15/280 (5%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS-------- 59
V + + +A D + W N V T+ + A+L N V+ +
Sbjct: 282 VGGLCRVGRVGAALDFFREKRTTWLEARGNAV--TYSTLVSAFLHCNNVALAMELFHEMA 339
Query: 60 -RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+G+ D Y TM+ +A R+ + M++ G +D Y ++ +
Sbjct: 340 DQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLH 399
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++EEMK P + +Y + L ++ MI G P+ T+ L+
Sbjct: 400 EAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLV 459
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+AGK +EAL+IF M EA +QP+ N LI+ CK+ E I + M+EN +
Sbjct: 460 HGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVP 519
Query: 239 LR---YPVFKEALQTFKVADENDSLLWQV-HPQFSPEFIS 274
Y + LQ + ++ L+ Q+ + +P++++
Sbjct: 520 ANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVT 559
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 3/188 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D +TY T+L +A S++ + M + G VT+ +++H AG
Sbjct: 409 KGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKT 468
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ I+ M P V Y + L + V A ++ EM + +P N TY L
Sbjct: 469 DEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNAL 528
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN-- 235
++ L E+A E+ +M+E PD ++L+E + GET + + E
Sbjct: 529 LKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEKGG 588
Query: 236 -RLALRYP 242
+L ++ P
Sbjct: 589 AKLTMKPP 596
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 126/323 (39%), Gaps = 51/323 (15%)
Query: 46 MEKAWLFFNWVSRS-RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
++ A +F + R G + TY + D I + E M+++G+ + +T
Sbjct: 219 LQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITM 278
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
+++ L G V A++ + E + E V+Y+ + + V A +++ EM
Sbjct: 279 NTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEM 338
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKY----------------------------------- 187
+G PP+ Y ++ L +AG+
Sbjct: 339 ADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRL 398
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
EA ++F +M+ AG+QPD N L+ CKAG+ + +L M ++ F
Sbjct: 399 HEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTL 458
Query: 248 LQTFKVADENDSLL----WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKK 303
+ + A + D L + P + N ++F+ E +D + L +
Sbjct: 459 VHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSRE----VDVAIKLFDEMR 514
Query: 304 KNLVAI-----DSLLSGIMDKSI 321
+N V ++LL G+ DK++
Sbjct: 515 ENNVPANVTTYNALLKGLQDKNM 537
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 148/372 (39%), Gaps = 48/372 (12%)
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP-PNCYTYTVLMEYLVRAGKYE 188
+ C P S + K+L +A ++ + G P P+ T+ L+ L RAG
Sbjct: 90 RHCIPP-PSASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLR 148
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE--NRLALRYPVFKE 246
E+F+ M+EA V+PD IL+ + CKAG + +L M + + +
Sbjct: 149 GMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNT 208
Query: 247 ALQTF-KVADENDSLLW------QVHPQFSPEFISDN---DAVEFVTTDIEGPLSIDQGL 296
+ K+ D++++ QVH +P ++ N DA V ID
Sbjct: 209 VVDGLCKIGRLQDAIVFVDERMRQVH-GCAPNTVTYNCLADACCRVG-------DIDMAC 260
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF---EYSVK 353
++ +K G+ I +++ ++ + V R GA L F + +
Sbjct: 261 QIVERMEKE---------GVTPNVITMNT-IVGGLCRVG-----RVGAALDFFREKRTTW 305
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
++ Y L+ + N E+ EM G+ + +I L A R V
Sbjct: 306 LEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVD 365
Query: 414 AAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A I + + + D+K Y LIG + +A ++++ M G+ P + T+N
Sbjct: 366 ACNIAASMKKAGFKLDRK---AYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNT 422
Query: 469 LLAGLEKLGRVS 480
LL+ L K G S
Sbjct: 423 LLSCLCKAGDFS 434
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRK 487
T TY L G D A +I + M ++G+ P++ T N ++ GL ++GRV A + +
Sbjct: 240 TVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFR 299
Query: 488 EKKS 491
EK++
Sbjct: 300 EKRT 303
>gi|357110688|ref|XP_003557148.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Brachypodium distachyon]
Length = 1038
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 192/460 (41%), Gaps = 18/460 (3%)
Query: 33 SYTVNQVLKTHPPME---KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
+YT +L + E KA F + +SR D Y ++ I+G+ + F
Sbjct: 350 NYTCASLLSLYYKTEDYSKALSLFAEMEQSR-IVPDEVIYGILVRIYGKVGLYEDAQCTF 408
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
E + + D TY ++ NAG+ D A+ + + M+L+ P++ SY+A ++
Sbjct: 409 EEIDRADLLSDEQTYVAMAQVHMNAGNYDRALQVLDSMRLRNVEPSLFSYSAVLRCHVAK 468
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ + A D ++ + + G+ P+ + L+ V+ G+ E+A + K+++ VQ D+ C
Sbjct: 469 EDIAAAEDAFRALSKCGI-PDVFCCNDLLRLYVKLGQLEKASALILKLRKE-VQLDEGLC 526
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFS 269
++E CCK+G IL+ M++NR+A++ ++ + N + + Q S
Sbjct: 527 MTVMEVCCKSGMIVDADKILKEMQKNRVAMKNSAMVSLIEMYA---RNTTSVVQEEDNSS 583
Query: 270 PEFISDND-----AVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLD 324
D + D G S L+ ++ N L + + ++ +
Sbjct: 584 KTLDCRTDSSSLSTTLKLLLDTPGGSSAACQLIRKFAREGNTEEAKFLHEQLNELGVKPE 643
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
+ +T+I ++ A F+ S + Y A++ L K + +
Sbjct: 644 DSATATLIVQYGQLQKLQQAEELFKASASFPVG--GPVYNAMVDALCKCGKTAEAYNLFM 701
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAG 442
EM GHS ++L+ L + A I + + Q T Y I +G
Sbjct: 702 EMADRGHSRDAVTISILVSHLTKHGKFQEAENIINGCFHGKVQLDTVVYNTFIKSMLESG 761
Query: 443 SADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
A+ I+ M GI SL TFN++++ + G++ A
Sbjct: 762 KLYSAVSIHDRMISSGIPQSLQTFNIMISVYGQGGKLDKA 801
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++KA F ++ G D TYT ML +G+A R +F M+E+GI +++
Sbjct: 798 LDKATEMFT-AAQELGLRIDEKTYTNMLSFYGKAGRHQDASVLFTRMKEEGIMPGKISFN 856
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+++ + +G D A I+EEM+ P ++Y A +K +A + + M+
Sbjct: 857 SMVNVYATSGLHDKAKFIFEEMQSSGQIPESLTYLALIKAYTEGRSYSKAEEAIQMMLTS 916
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE-----KCCKAG 220
+ +C + L+ ++ GK +EA I ++M++ GV PD A C ++ CC G
Sbjct: 917 NITLSCPHFNHLIFAFLKEGKIDEARRICNEMEDLGVAPDLACCRTMMRVYLEYGCCSEG 976
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
LF+ V R RG + M+ + K + Y++ M+E + + TYT V+
Sbjct: 231 LFYAAVRR-RGVVPPVSAFNFMVSSLQKDKLHGKVIYLWNQMRETNVVPNQFTYTIVIGS 289
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
++ A+N+W +MK P +Y+ + + + R ++A +Y+EM G+ P+
Sbjct: 290 YVKESLLEEAMNVWRKMKRSRFVPEEATYSGLISLSARHGRGEQALGLYEEMRAHGIVPS 349
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
YT L+ + Y +AL +F++M+++ + PD+ IL+ K G
Sbjct: 350 NYTCASLLSLYYKTEDYSKALSLFAEMEQSRIVPDEVIYGILVRIYGKVG 399
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y M+D + + + +F M ++G + DAVT + ++ L+ G A NI
Sbjct: 680 YNAMVDALCKCGKTAEAYNLFMEMADRGHSRDAVTISILVSHLTKHGKFQEAENIINGCF 739
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+ V Y ++K + + ++ A ++ MI G+P + T+ +++ + GK +
Sbjct: 740 HGKVQLDTVVYNTFIKSMLESGKLYSAVSIHDRMISSGIPQSLQTFNIMISVYGQGGKLD 799
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
+A E+F+ QE G++ D+ ++ KAG + ++ MKE
Sbjct: 800 KATEMFTAAQELGLRIDEKTYTNMLSFYGKAGRHQDASVLFTRMKE 845
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 87/197 (44%)
Query: 39 VLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN 98
VL +A FF W+ + YT +L ++G+ +I + F M E G+
Sbjct: 148 VLSQQRGPRQAQEFFAWMKLQLCYEPSVVAYTILLRLYGQVGKIKLAEETFLEMLEVGVE 207
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV 158
DAV +++ + G + + ++ + P + ++ + L + + +
Sbjct: 208 PDAVACGTLLCTYARRGQHTDMMLFYAAVRRRGVVPPVSAFNFMVSSLQKDKLHGKVIYL 267
Query: 159 YKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ +M + + PN +TYT+++ V+ EEA+ ++ KM+ + P++A + LI +
Sbjct: 268 WNQMRETNVVPNQFTYTIVIGSYVKESLLEEAMNVWRKMKRSRFVPEEATYSGLISLSAR 327
Query: 219 AGETRTIILILRYMKEN 235
G + + M+ +
Sbjct: 328 HGRGEQALGLYEEMRAH 344
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 150/392 (38%), Gaps = 38/392 (9%)
Query: 76 FGEAKRISSMKYVFELMQEKGINI-DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
F K++ E + E G+ D+ T T ++ + G + E K +P
Sbjct: 619 FAREGNTEEAKFLHEQLNELGVKPEDSATATLIVQY----GQLQKLQQAEELFKASASFP 674
Query: 135 TIVS-YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
Y A + L + EA +++ EM RG + T ++L+ +L + GK++EA I
Sbjct: 675 VGGPVYNAMVDALCKCGKTAEAYNLFMEMADRGHSRDAVTISILVSHLTKHGKFQEAENI 734
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
+ VQ D N I+ ++G+ + + I M + + ++LQTF +
Sbjct: 735 INGCFHGKVQLDTVVYNTFIKSMLESGKLYSAVSIHDRMISSGIP-------QSLQTFNI 787
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL----KKKNLVAI 309
+ V+ Q + A E T E L ID+ +L K
Sbjct: 788 -------MISVYGQGGKL----DKATEMFTAAQELGLRIDEKTYTNMLSFYGKAGRHQDA 836
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
L + + ++ I ++++ V D A FE E YLALI
Sbjct: 837 SVLFTRMKEEGIMPGKISFNSMVNVYATSGLHDKAKFIFEEMQSSGQIPESLTYLALIKA 896
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGV-YLGALLI-----HRLGSARRPVPAAKIFSLLPE 423
+ ++ K E ++ M + +L + L+ ++ ARR + + P
Sbjct: 897 YTEGRSYSKAEEAIQMMLTSNITLSCPHFNHLIFAFLKEGKIDEARRICNEMEDLGVAP- 955
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMC 455
D C T ++ VY G + + ++KT C
Sbjct: 956 DLACCRT---MMRVYLEYGCCSEGISLFKTTC 984
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 99 IDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY-PTIVSYTAYMKILFLNDRVKEATD 157
+ +T+ + LS A + MKL+ CY P++V+YT +++ ++K A +
Sbjct: 137 VSKLTFREMCVVLSQQRGPRQAQEFFAWMKLQLCYEPSVVAYTILLRLYGQVGKIKLAEE 196
Query: 158 VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
+ EM++ G+ P+ L+ R G++ + + ++ ++ GV P +A N ++
Sbjct: 197 TFLEMLEVGVEPDAVACGTLLCTYARRGQHTDMMLFYAAVRRRGVVPPVSAFNFMVSSLQ 256
Query: 218 KAGETRTIILILRYMKENRL 237
K +I + M+E +
Sbjct: 257 KDKLHGKVIYLWNQMRETNV 276
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 1/159 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A + + RSR F + TY+ ++ + R ++E M+ GI T
Sbjct: 296 LEEAMNVWRKMKRSR-FVPEEATYSGLISLSARHGRGEQALGLYEEMRAHGIVPSNYTCA 354
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ D A++++ EM+ P V Y ++I ++A ++E+ +
Sbjct: 355 SLLSLYYKTEDYSKALSLFAEMEQSRIVPDEVIYGILVRIYGKVGLYEDAQCTFEEIDRA 414
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L + TY + + + AG Y+ AL++ M+ V+P
Sbjct: 415 DLLSDEQTYVAMAQVHMNAGNYDRALQVLDSMRLRNVEP 453
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+ F + +G TYT ++D K + V +LM E G D VTY
Sbjct: 129 VERAFRLFEEMV-DKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYN 187
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ + AG +D A++++ EM + C P +V+Y + + +V+EA ++ EM R
Sbjct: 188 MLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKAR 247
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ PN TYT + + ++AG+ ++A +M++ G+ D + LI CK G+ +
Sbjct: 248 GIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGKGKLG 306
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADE 256
+LR M E FK L TF V E
Sbjct: 307 FQLLREMLEKG-------FKPNLVTFNVVFE 330
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD----VDGA 120
D +TY +++ + R+ + + E+MQ + D VTY +++H L G+ V+ A
Sbjct: 73 DIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNGRFRVERA 132
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++EEM K PT V+YT + L ++A V M + G + TY +L+
Sbjct: 133 FRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINR 192
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+AG ++A+++F +M G PD N +++ CKAG+
Sbjct: 193 FAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGK 233
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 11 ILKYSTWDSAQ---DLLKNLPIKWDSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNH 64
+L+ + AQ DL+ +D T N ++ M+KA F + +RG
Sbjct: 158 LLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMP-TRGCIP 216
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +++D F +A ++ +F M+ +GI + TYTS+ AG + A
Sbjct: 217 DVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYL 276
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EM+ KE +SY A + + + K + +EM+++G PN T+ V+ E L +
Sbjct: 277 VEMR-KEGLVDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKE 335
Query: 185 GKYEEA 190
++A
Sbjct: 336 SNTDDA 341
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 100 DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVY 159
+A TY++++ G+ A+ + E MK E Y + L + + KEA D+
Sbjct: 3 NAFTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLL 62
Query: 160 KEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKA 219
M P+ YTY +L+ L + G+ E+A + MQ D N LI C+
Sbjct: 63 HSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRK 122
Query: 220 GETR 223
G R
Sbjct: 123 GNGR 126
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 139/356 (39%), Gaps = 60/356 (16%)
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
N +TY+ ++ G+ +AL + M+ A V + NI++ CK G+ + + +L
Sbjct: 3 NAFTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLL 62
Query: 230 RYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
M A P+ + N + + G
Sbjct: 63 HSMATTSCA-------------------------------PDIYTYNILINALCK--VGR 89
Query: 290 LSIDQGLVLILLKK---KNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHR-RRDGAL 345
L QGLV ++ + ++V ++L+ G+ K + R R + A
Sbjct: 90 LEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKG----------------NGRFRVERAF 133
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
FE V Y +I L+++ + ++++ M + G + + +LI+R
Sbjct: 134 RLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRF 193
Query: 406 GSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
A A +F +P + C TY +++ + AG ++A K++ M +GI P+
Sbjct: 194 AKAGMMDKAMDLFVEMPT-RGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPN 252
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKE-KKSIQADALSKDAVPMEEKICDLLYGGDG 517
T+ + K GR+ DA Y E +K DA+S V + IC L G G
Sbjct: 253 GRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAIS--YVALISTICKLGKGKLG 306
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 177/479 (36%), Gaps = 54/479 (11%)
Query: 15 STWDSAQD-LLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
S+W+ + ++NL V VL++ A FF W R + HD Y +ML
Sbjct: 158 SSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSML 217
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
++ + K + V LM+ +GI + VM S AG + A+ + M+
Sbjct: 218 EVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVE 277
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P ++ + + +R+++A + M G+ PN TY ++ + EEA+E+
Sbjct: 278 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 337
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-KENRLALRYPVFKEALQTFK 252
M G PDK + ++ CK + +++ M KE+ L + +
Sbjct: 338 LDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLT 397
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
D D LW F+ D +
Sbjct: 398 KHDHADEALW---------FLKDAE----------------------------------- 413
Query: 313 LSGIMDKSIQLDSAVISTIIEVNC-DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+K ++D S I+ C + R + L E K + Y A++
Sbjct: 414 -----EKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 468
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTA 429
+L K ++++ M G+ L++ L + + A ++ ++ E +
Sbjct: 469 RLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSI 528
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
TY+ L+ G +A + + M KG P N+LL L + GR +A + +E
Sbjct: 529 TYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 587
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 175/425 (41%), Gaps = 24/425 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM-QEKGINIDAVTYTSVMHWLSNAGDV 117
S+G D+ +Y T++ + KRI ++ + + M +E G+ D VTY +++H L+
Sbjct: 343 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHA 402
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG-LPPNCYTYTV 176
D A+ ++ + K V Y+A + L R+ EA D+ EM+ +G PP+ TYT
Sbjct: 403 DEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 462
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRYMK 233
++ R G+ ++A ++ M G +P+ + L+ C+ G E R ++ +
Sbjct: 463 VVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQW 522
Query: 234 ENRLALRYPVFKEALQT-FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ ++ Y V L+ K+++ D + V F P GP+ I
Sbjct: 523 WSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFP-----------------GPVEI 565
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
+ L+ L + + ++K ++ +T+I C + D AL +
Sbjct: 566 NL-LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 624
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
++ + + Y L+ L K + E++++M G +IHR +
Sbjct: 625 LINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVD 684
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
I + QKC Y +I G ++A K+ + R T L+ G
Sbjct: 685 DLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEG 744
Query: 473 LEKLG 477
K+G
Sbjct: 745 YLKIG 749
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 16/316 (5%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE 94
T+ +L H ++A L+F + +GF D+ Y+ ++ + R+S K + M
Sbjct: 391 TLIHMLTKHDHADEA-LWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLS 449
Query: 95 KG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK 153
KG D VTYT+V++ G+VD A + + M P VSYTA + L +
Sbjct: 450 KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSL 509
Query: 154 EATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
EA ++ ++ PN TY+VLM L + GK EA ++ +M G P N+L+
Sbjct: 510 EAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLL 569
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFI 273
+ C+ G T + A+ F + F DE D+ L + + I
Sbjct: 570 QSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY---LI 626
Query: 274 SDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
+ + V TT LV L KK + L+ ++ K I T+I
Sbjct: 627 NKHADVFTYTT-----------LVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 675
Query: 334 VNCDHRRRDGALLAFE 349
C + D + E
Sbjct: 676 RYCQMEKVDDLVAILE 691
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 96/245 (39%), Gaps = 36/245 (14%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+ + G+ + +YT +L+ + + + + +E+ + +++TY+ +MH L G
Sbjct: 482 IMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEG 541
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC---- 171
+ A ++ EM LK +P V ++ L + R EA +E + +G N
Sbjct: 542 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 601
Query: 172 -------------------------------YTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+TYT L++ L + G+ EA E+ KM
Sbjct: 602 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHK 661
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYM-KENRLALRYPVFKEALQTFKVADENDS 259
G+ P +I + C+ + ++ IL M + Y E L +E D
Sbjct: 662 GIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADK 721
Query: 260 LLWQV 264
LL +V
Sbjct: 722 LLGKV 726
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D FTYTT++D G+ RI+ + + M KGI+ VTY +V+H VD V I
Sbjct: 631 DVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAIL 690
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E+M L++ TI Y ++ L +++EA + ++++ + T LME ++
Sbjct: 691 EKMILRQKCKTI--YNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKI 748
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCC--KAGETRTIILILRYMKEN------- 235
G A ++ +M + PD C L ++ AG ++L + +N
Sbjct: 749 GVPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGAGNDNNMLLYFSLVSDNLQIPSEA 808
Query: 236 -RLALR 240
RL+LR
Sbjct: 809 TRLSLR 814
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 188/458 (41%), Gaps = 33/458 (7%)
Query: 15 STWDSAQDLLKNLPIKWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTT 71
S W+ Q +L +SY N V+ + KA F+ + + GF D +Y+
Sbjct: 266 SAWNFLQ-MLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKC-GFVPDVHSYSI 323
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
++D + + + Y+ M GI + V+Y+S++H L AG V+ A +++ +K +
Sbjct: 324 LVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQG 383
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+ Y+ + + ++ D++ +M+ P+ Y Y+ L+ R + +EAL
Sbjct: 384 FKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEAL 443
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
E+F M G+ P+ C IL+ G L L +++ + ++ +
Sbjct: 444 EVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGL 503
Query: 252 -KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
KV ND +W + +D +V + + ID +K +L
Sbjct: 504 CKVNKPND--VWGI--------FADMIKRGYVPDTVLYSIIIDG-----FVKALDLQEAF 548
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
L ++D+ + + +++I C + + F++ + L +R Y +LI
Sbjct: 549 RLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACY 608
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-------SLLPE 423
K + EI EM G S ++ LI S + A++F L P
Sbjct: 609 CKRSNMKAALEIFREMETEGLSADSFVYTCLIGGF-SKVLAMDGAQLFMEEMMNKGLTPT 667
Query: 424 DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
TYT LI YF G KA+ +Y +M + GI P
Sbjct: 668 ----VVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAP 701
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/482 (20%), Positives = 185/482 (38%), Gaps = 62/482 (12%)
Query: 33 SYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF 89
SY+V + TH +E+A + + G + TY T L AK++ S
Sbjct: 213 SYSVLMSMYTHGAKLCLEEAQELLSEME-VEGVRPNAATYGTYLYGLCRAKQVKSAWNFL 271
Query: 90 ELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
+++ ++G ++ + +V+H + G V AV +++ MK P + SY+ + L
Sbjct: 272 QMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQ 331
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
V + EM + G+ PN +Y+ L+ L RAG+ E A E+F ++++ G + D
Sbjct: 332 GDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVY 391
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLA-------------LRYPVFKEALQTFKVADE 256
+I++ CC+ + + M + R+ KEAL+ F++
Sbjct: 392 SIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFEL--- 448
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV----LILLKKKNLVAIDSL 312
I D VT I ++GL+ L L K + + +L
Sbjct: 449 ---------------MICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNL 493
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+ II C + + F +K + Y +I +K
Sbjct: 494 CT-------------YRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVK 540
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLLPEDQK 426
+ + +M G ++ LI+ L + +F L P+
Sbjct: 541 ALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPD--- 597
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
YT+LI Y + AL+I++ M +G+ + L+ G K+ + A+++
Sbjct: 598 -RILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFM 656
Query: 487 KE 488
+E
Sbjct: 657 EE 658
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 168/405 (41%), Gaps = 28/405 (6%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV--DGAVNIWEEMKLKECYPT 135
E +I ++ +F+ M+ G + + +Y+ +M ++ + + A + EM+++ P
Sbjct: 188 EGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPN 247
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+Y Y+ L +VK A + + + QRG P N Y + ++ G+ +A+E+F
Sbjct: 248 AATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFD 307
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
M++ G PD + +IL++ CK G+ T +L M N + + L A
Sbjct: 308 GMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG 367
Query: 256 ENDSLLWQVHPQFSPE-FISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLS 314
+ L +++ + + F D+ V L ++ + D L +
Sbjct: 368 RVE-LAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLE-------------ICYD-LWN 412
Query: 315 GIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLN 374
++ + D+ S++I C HR+ AL FE + + L+
Sbjct: 413 DMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEG 472
Query: 375 TFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPEDQKCT 428
+ ++++ + G + ++I+ L +P IF+ +P+ T
Sbjct: 473 LIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPD----T 528
Query: 429 ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
Y+ +I + A +A ++Y M +G P++ T+ L+ GL
Sbjct: 529 VLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGL 573
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G DR YT+++ + + + + +F M+ +G++ D+ YT ++ S +DGA
Sbjct: 593 GLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGA 652
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
EEM K PT+V+YT + F K+A +Y M+Q G+ P+
Sbjct: 653 QLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S ++ +K E L++ V G + FTYT++++ ++ + +F+ M
Sbjct: 532 SIIIDGFVKALDLQEAFRLYYKMVDE--GTKPNIFTYTSLINGLCHDDKLPEVMTLFKHM 589
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYT----AYMKILFL 148
+G+ D + YTS++ ++ A+ I+ EM+ + YT + K+L +
Sbjct: 590 IGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAM 649
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD-KA 207
+ A +EM+ +GL P TYT L+ + G ++A+ +++ M +AG+ PD K
Sbjct: 650 DG----AQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKL 705
Query: 208 AC 209
+C
Sbjct: 706 SC 707
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/362 (18%), Positives = 132/362 (36%), Gaps = 33/362 (9%)
Query: 143 MKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK--YEEALEIFSKMQEA 200
+K L +++ ++ +M G PN Y+Y+VLM K EEA E+ S+M+
Sbjct: 183 LKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVE 242
Query: 201 GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSL 260
GV+P+ A + C+A + ++ L+ + + F + F +
Sbjct: 243 GVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKA 302
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK-----NLVAIDSLLSG 315
+ F+ D + + + + G +++ + NLV+ SLL G
Sbjct: 303 VEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHG 362
Query: 316 IM----------------DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLE 359
+ D+ + D V S ++ C H + + V + +
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPD 422
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR------LGSARRPVP 413
Y +LI + + E+ E M G V +L+H +G A +
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ F ++P TY +I + I+ M ++G P +++++ G
Sbjct: 483 KVRQFGVVPN----LCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGF 538
Query: 474 EK 475
K
Sbjct: 539 VK 540
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ T+ ++D F + +++ K VFE MQ +G+ + VTY S+++ L + G +D A+ +
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M P +V+Y A + +KEA ++ ++ +RGL PN T+ L++ +A
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRY 241
G+ ++A + S M + GV P+ + N LI C+ G + + + M+ N L + Y
Sbjct: 418 GRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY 477
Query: 242 PVFKEAL 248
+ +AL
Sbjct: 478 NILVDAL 484
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 174/461 (37%), Gaps = 90/461 (19%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+F W + G H+ + +L + AK + ++ + + + + +++ H L
Sbjct: 93 YFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNA----HYSNSTIFHSL 148
Query: 112 SNAGDVDGAVNI------WEEMKLKE----------------------CYPTIVSYTAYM 143
S G A +I W +K E C P +VS
Sbjct: 149 SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS----- 203
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
L R+ VYKEMI+R + N T+ V++ L + GK+++A ++ M+ G
Sbjct: 204 --LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS 261
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
P N +I+ CKAG+ +L+ M R+ F + F DEN + +
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF-CRDENVTAAKK 320
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
V + QGL + N+V +SL++G+
Sbjct: 321 VFEEMQ-----------------------RQGL------QPNVVTYNSLINGL------- 344
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
C + + D AL + M L Y ALI K + E++
Sbjct: 345 ------------CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSA 441
+++ K G + V LI G A R A + S++ + C +TY LI +
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G+ +A K+ K M G+ L T+N+L+ L K G A
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG + T+ T++D +G+A R+ + +M + G+ + TY ++ G+V
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A + +EM+ +V+Y + L ++A + EM + GL P+ TY L++
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALID 517
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
R G AL + + M++ G + + N+LI+ C G+ +L M E L
Sbjct: 518 GYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGL 575
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + TY +++ F + K + + + + + ++G+ + +T+ +++ AG +D A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ M P + +Y + VKEA + KEM GL + TY +L++
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L + G+ +A+ + +M E G+ P N LI+ + G + T L +R + E +
Sbjct: 484 LCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNS-TAALNVRTLMEKK 538
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ F + + + + M+ G+ D VTY ++ L G+ AV + +EM
Sbjct: 441 TYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
P+ ++Y A + F A +V M ++G N TY VL++ GK
Sbjct: 501 FEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKL 560
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
EEA + ++M E G+ P++ +IL ++ + G
Sbjct: 561 EEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
G D TY ++D + + + M E G+N +TY +++ G+
Sbjct: 467 GNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNST 526
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+N+ M+ K IV+Y +K +++EA + EM+++GL PN TY +L
Sbjct: 527 AALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 586
Query: 179 EYLVRAG 185
+ ++ G
Sbjct: 587 DEMMEKG 593
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 160/404 (39%), Gaps = 59/404 (14%)
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE-CYPTIVSYTAYMKI 145
+ + M+ G+ VTY ++ L+NAG +D A+N+++ M ++ P +VSY +K
Sbjct: 194 WAWSAMRLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKG 253
Query: 146 LFLNDRVKEATDVYKEMIQRG-LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
R ++A M ++ L P+ TY LM+ G + + + +F +M+E G+
Sbjct: 254 YCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGMGK 313
Query: 205 D--KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLL 261
D + A ++I CK G+ + + M ++ + ++ + T K EN+++L
Sbjct: 314 DIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENEAML 373
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
L + +
Sbjct: 374 --------------------------------------------------LFERMKASGL 383
Query: 322 QLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAE 381
+LD+ I+ C + D A+L F V+ + + Y +LI K + E
Sbjct: 384 ELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSLIDGFGKAGMVDQAQE 443
Query: 382 IVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVY 438
+ EEM G Y +LI L A R A ++ + ED C TYT +I
Sbjct: 444 LFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRM-EDDGCDQTVYTYTIIIDGL 502
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
F ++A+K + TM KGI P+ F GL G+ S A
Sbjct: 503 FKKHKNEEAIKFWNTMIDKGITPTAAAFRTFANGLCLSGKFSRA 546
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A L F + ++ G D TY +++ ++ F EKGI ++A+ YTS+
Sbjct: 370 EAMLLFERM-KASGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSL 428
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ AG VD A ++EEMK+K P Y + L R+ +A +YK M G
Sbjct: 429 IDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMEDDGC 488
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
YTYT++++ L + K EEA++ ++ M + G+ P AA C +G+
Sbjct: 489 DQTVYTYTIIIDGLFKKHKNEEAIKFWNTMIDKGITPTAAAFRTFANGLCLSGKFSRACR 548
Query: 228 IL 229
IL
Sbjct: 549 IL 550
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 3/175 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E F N V + G + YT+++D FG+A + + +FE M+ KG D+ Y
Sbjct: 405 EAILCFRNCVEK--GIAVNAIFYTSLIDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNV 462
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ L+ AG +D A +++ M+ C T+ +YT + LF + +EA + MI +G
Sbjct: 463 LIDGLAKAGRLDDACALYKRMEDDGCDQTVYTYTIIIDGLFKKHKNEEAIKFWNTMIDKG 522
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ P + L +GK+ A I ++ GV P+ A + +I CKAG
Sbjct: 523 ITPTAAAFRTFANGLCLSGKFSRACRILDELAPMGVIPETAHED-MINVLCKAGR 576
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 8/214 (3%)
Query: 51 LFFNWVS-RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQ-EKGINIDAVTYTSVM 108
L + W + R G R TY +LD A + + VF+ M E + D V+Y ++
Sbjct: 192 LLWAWSAMRLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILI 251
Query: 109 HWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
AG A+ M+ + E P V+Y M++ + + +++EM + G+
Sbjct: 252 KGYCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGM 311
Query: 168 PPNC--YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ + Y +++ L + GK E L +F +M ++G A LI+ K G
Sbjct: 312 GKDIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENEA 371
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADE 256
+L+ MK + L A+ Y V L F DE
Sbjct: 372 MLLFERMKASGLELDAITYGVIVNCLCRFGKLDE 405
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/388 (18%), Positives = 149/388 (38%), Gaps = 27/388 (6%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTY 104
++ A F+ +S D +Y ++ + A R +M + + ++ ++ D VTY
Sbjct: 224 LDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRAQDAMARLAHMREQAELSPDKVTY 283
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK--EATDVYKEM 162
++M + G + +++EM+ I + + I L K E V++ M
Sbjct: 284 LTLMQLHYSEGTFSQCIRLFQEMEEMGMGKDIPQHAYVLVIGALCKEGKPFEGLAVFERM 343
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++ G P YT L++ + + G+ EA+ +F +M+ +G++ D +++ C+ G+
Sbjct: 344 LKSGYPAKAAMYTALIDTMGKFGRENEAMLLFERMKASGLELDAITYGVIVNCLCRFGKL 403
Query: 223 RTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
IL R E +A+ + + F A D F+ D+ +
Sbjct: 404 DEAILCFRNCVEKGIAVNAIFYTSLIDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVL 463
Query: 283 TTDIEGPLSIDQGLVL----------------------ILLKKKNLVAIDSLLSGIMDKS 320
+ +D L + K KN AI + ++DK
Sbjct: 464 IDGLAKAGRLDDACALYKRMEDDGCDQTVYTYTIIIDGLFKKHKNEEAI-KFWNTMIDKG 522
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
I +A T C + A + M + + TA+ +I +L K F +
Sbjct: 523 ITPTAAAFRTFANGLCLSGKFSRACRILDELAPMGV-IPETAHEDMINVLCKAGRFKQAC 581
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSA 408
++ + + + G + + ++I L A
Sbjct: 582 KLADGIVQKGREIPGRVRTMMITALRKA 609
>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 938
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 179/449 (39%), Gaps = 63/449 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +A +SS +++ M EK + + VTY+S+++ G ++ AV++ +M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ + P +Y + LF + + A ++ KEM G+ N Y L+ +L R G+
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
+E + M GV D+ LI+ K G+ + M+E + + Y V
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ F + + P+ + N + + + +G++ + K K
Sbjct: 546 ISGMLKFGKVGADWAYKGMREKGIEPDIATFN-----IMMNSQRKQGDSEGILKLWDKMK 600
Query: 305 NLVAIDSLLS-----------GIMDKSIQLDSAVI-----------STIIEVNCDHRRRD 342
+ SL+S G M+++I + + ++ ++ + H+R D
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 660
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
E + + L R Y LI L KL K A ++ +M G
Sbjct: 661 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG------------ 708
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
+P+ T T+ +L+ YF KAL Y M GI P+
Sbjct: 709 -----------------FIPD----TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 747
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ T+N ++ GL G + + + + E KS
Sbjct: 748 VATYNTIIRGLSDAGLIKEVDKWLSEMKS 776
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 208/519 (40%), Gaps = 71/519 (13%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNH 64
++ K A LL+N I D+ T N V+ H ++A+ F + + + G
Sbjct: 136 IHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK-MGILP 194
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQE----------------------------KG 96
D +Y T++D F + K + + + E G
Sbjct: 195 DTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSG 254
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
+ D VT++S+++ L G V + EM+ YP V+YT + LF + + A
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 314
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+Y +M+ RG+P + YTVLM+ L +AG EA + F + E P+ L++
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQ-FSPEF 272
CKAG+ + I+ M E + + + + + +E SLL ++ Q P
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+ T I+G + + I L K + L G+ + + LD+ V
Sbjct: 435 FT-------YGTVIDGLFKAGKEEMAIELSK------EMRLIGVEENNYILDALV----- 476
Query: 333 EVNCDHRRRDGALLAFEYSVK----MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+H +R G + + VK + L++ Y +LI + K EEM +
Sbjct: 477 ----NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE 532
Query: 389 AGH-----SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
G S V + +L A + + P+ AT+ ++ G
Sbjct: 533 RGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPD----IATFNIMMNSQRKQGD 588
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ LK++ M GI PSL + N+++ L + G++ +A
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEA 627
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 191/455 (41%), Gaps = 25/455 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + + +++ RI +K + + M KG+ +D + YTS++ GD
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ EEM+ + +VSY + + +V A YK M ++G+ P+ T+ ++
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIM 579
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M + G E L+++ KM+ G++P +CNI++ C+ G+ I IL M +
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
Y +F + K AD +++ H I ++ + L I
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADA----IFKTHETLLSYGIK-------LSRQVYNTL-IAT 687
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L + KK +V D G + ++ +S + + H R+ AL + ++
Sbjct: 688 LCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG---SHVRK--ALSTYSVMMEA 742
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
++ Y +I L +V + + EM G + LI +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 415 AKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
I+ + D T+TY LI + + G +A ++ K M ++G+ P+ T+ +++G
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Query: 473 LEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEK 507
L KL D E +K +A L K+ V EEK
Sbjct: 863 LCKLCTHPDVEWNKKAMYLAEAKGLLKEMV--EEK 895
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 140/348 (40%), Gaps = 16/348 (4%)
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLM-EYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+R+ A M G+ P+ + L+ ++ V +++ I+SKM GV PD A
Sbjct: 72 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFA 131
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ-VHPQ 267
N+LI CK G I +LR + + Y L +ADE L + V
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 191
Query: 268 FSPEFISDN---DAVEFVTTDIEGPLSIDQ-------GLVLILLKKKNLVAIDSLLSGIM 317
P+ +S N D V + +D+ ++L NL AI+ ++
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMV 251
Query: 318 DKSIQLDSAVISTIIEVNCDHRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
D S+II C + +G LL E +M + Y L+ L K N +
Sbjct: 252 MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME-EMSVYPNHVTYTTLVDSLFKANIY 310
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTAL 434
+ +M G + + + +L+ L A A K F +L ED + TYTAL
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 370
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ AG A I M K + P++ T++ ++ G K G + +A
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 418
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 30/201 (14%)
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+S + ++ I +D+ +T+I C+H D A VKM + + +Y LI K
Sbjct: 149 ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK 208
Query: 373 LNTFPKVAEIVEE----------------------------MTKAGHSLGVYLGALLIHR 404
+ F + +V+E M +G V + +I+R
Sbjct: 209 VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINR 268
Query: 405 LGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L + + + + E TYT L+ F A AL +Y M +GI
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Query: 463 LGTFNVLLAGLEKLGRVSDAE 483
L + VL+ GL K G + +AE
Sbjct: 329 LVVYTVLMDGLFKAGDLREAE 349
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 185/480 (38%), Gaps = 92/480 (19%)
Query: 35 TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQ 93
TV Q L+ FF+WVS ++GF+H ++ ML+ G A+ ++ + ++F + +
Sbjct: 70 TVLQTLRLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIER 128
Query: 94 EKG--INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
+ + + S++ NAG +V +++ MK P+++++ + + IL R
Sbjct: 129 RSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGR 188
Query: 152 VKEATDVYKEMIQR-GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG--------- 201
A D++ EM + G+ P+ YT+ L+ + +EA IF M+ AG
Sbjct: 189 TGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVL 248
Query: 202 ---------VQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQ 249
V P+ + L+ C E +L+ M L A+ Y + L
Sbjct: 249 SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS 308
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAI 309
DE +L I NDA F T P
Sbjct: 309 EAHRYDEIKDIL-----------IGGNDA--FTTF---AP-------------------- 332
Query: 310 DSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGI 369
D+ + +I+ +CD D A+ F+ + M L+ + +Y LI
Sbjct: 333 --------------DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRT 378
Query: 370 LIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV-----------PAAKIF 418
L N F + + E+ + V LG L +A P+ A K+F
Sbjct: 379 LCMRNEFDRAETLFNELFEK----EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVF 434
Query: 419 -SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
L+ + +Y LI + G A ++ M R+ P L T+ +L+ GL K+G
Sbjct: 435 RQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG 494
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 30/336 (8%)
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV 121
F D T+ ++ +A + + VF+ M ++ D+ +Y+ ++ L + D A
Sbjct: 330 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 389
Query: 122 NIWEEMKLKE-------CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL--PPNCY 172
++ E+ KE C P +Y + L N + K+A V++++++RG+ PP
Sbjct: 390 TLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP--- 446
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+Y L+ R GK++ A E+ M PD +LI+ K GE L+ M
Sbjct: 447 SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 506
Query: 233 KENRLALRYPVFKEALQTF---KVADENDSLLW-------QVHPQFSPE-----FISDND 277
+ F L K A+E+ L+ + + S + F S
Sbjct: 507 LRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQK 566
Query: 278 AVEFVTTDI---EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
F+ + G L + L+ L + + L+ +L+ ++KS +D +T+IE
Sbjct: 567 EKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEG 626
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
C H+R A + V++ + + + ++ L L
Sbjct: 627 LCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNAL 662
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 400 LLIHRLGSARR-PVPAAKIFSLLPEDQKCTAT----YTALIGVYFSAGSADKALKIYKTM 454
L++ LG AR V +FS+ C + +LI Y +AG +++K+++TM
Sbjct: 105 LMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTM 164
Query: 455 CRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ GI PS+ TFN LL+ L K GR A
Sbjct: 165 KQMGISPSVLTFNSLLSILLKRGRTGMAH 193
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 198/500 (39%), Gaps = 56/500 (11%)
Query: 16 TWDSAQDLLKNLPIKWDSYTVNQ-----VLKTH---PPMEKAWLFFNWV-----SRSR-- 60
T +A L N+P + S++ N+ + TH P + W NW +R+R
Sbjct: 18 TLRTACGLFSNVP-NFRSFSQNKGFTRVLASTHITISPKDSVWTLSNWKVGRKDTRNRDI 76
Query: 61 ---------------GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
G D T +L ++ ++ V E+ E GI DA +YT
Sbjct: 77 RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYT 136
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ L G++ A+ + E+M+ C V+Y + ++ L + + ++ + +++++
Sbjct: 137 FLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRK 196
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL PN +T++ L+E + +EA+++ + G +P+ + N+L+ CK G T
Sbjct: 197 GLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 256
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTD 285
I R + L++ W+ + E S+ + VT +
Sbjct: 257 IQFFRDLPSKGFNPNVVSCNIILRSLCCEGR-----WEEANELVAEMDSEERSPSLVTYN 311
Query: 286 IEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGAL 345
I L+ L + +L +M S Q +A + II C + D +
Sbjct: 312 I---------LIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVV 362
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
+ + N + A I +L + + I++ + +S +I L
Sbjct: 363 KCLDQMIHHCCNPNDGTFNA-IAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSL 421
Query: 406 GSARRPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
PA ++ +P+ TY++LI G D+AL+I++ +
Sbjct: 422 CRKGNTYPAFQLLYEMIQSGFVPD----PYTYSSLIRGLCVEGMLDEALEIFRLLEENDY 477
Query: 460 HPSLGTFNVLLAGLEKLGRV 479
P LG FN L+ G K GR
Sbjct: 478 RPILGNFNALILGFCKSGRT 497
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 74/200 (37%), Gaps = 36/200 (18%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ RI V + M A T+ ++ L G D V ++M
Sbjct: 309 TYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQM 368
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEA---------------TDVYK------------ 160
C P ++ A + +L RV+ A D Y+
Sbjct: 369 IHHCCNPNDGTFNA-IAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNT 427
Query: 161 --------EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EMIQ G P+ YTY+ L+ L G +EALEIF ++E +P N L
Sbjct: 428 YPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNAL 487
Query: 213 IEKCCKAGETRTIILILRYM 232
I CK+G T + I M
Sbjct: 488 ILGFCKSGRTDLSLEIFEMM 507
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 131/330 (39%), Gaps = 31/330 (9%)
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
++++G P+ T L+ L ++ K ++A + E+G+ PD A+ L+ CK G
Sbjct: 88 IVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGN 147
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVE 280
+ ++ M+EN + ++ K + N SL Q+ + + + N+
Sbjct: 148 IGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSL--QLLDKLMRKGLVPNEFTH 205
Query: 281 -FVTTDIEGPLSIDQGLVL---ILLK--KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEV 334
F+ +D+ + L I+ K K NLV+ + LL+G+
Sbjct: 206 SFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGL------------------ 247
Query: 335 NCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C R + A+ F N + ++ L + + E+V EM S
Sbjct: 248 -CKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPS 306
Query: 395 VYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
+ +LI L S R A ++ + Q AT+ +I G AD +K
Sbjct: 307 LVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLD 366
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M +P+ GTFN +A L + GRV A
Sbjct: 367 QMIHHCCNPNDGTFNA-IAVLCEGGRVQRA 395
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + ++E++Q G D TY+S++ L G +D A+ I+ ++ + P + ++ A +
Sbjct: 430 AFQLLYEMIQ-SGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALI 488
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
+ R + ++++ MI +G PN TYT+L+E + + E A E+ ++
Sbjct: 489 LGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKEL 542
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 12/169 (7%)
Query: 85 MKYVFELMQEKGINIDAVT---YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ F ++Q G ++ T Y V+ L G+ A + EM P +Y++
Sbjct: 392 VQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSS 451
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
++ L + + EA ++++ + + P + L+ ++G+ + +LEIF M G
Sbjct: 452 LIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKG 511
Query: 202 VQPDKAACNILIEKCCK------AGETRTIILILRYMKEN---RLALRY 241
P++ IL+E A E + I + M+ N RL ++Y
Sbjct: 512 YTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQVMRRNTVERLVMQY 560
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 8/219 (3%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTV---NQVLKTHPPMEKAWLFFNWVS-----RSRGF 62
+ K + A D+++++ ++ S V N ++ + M K + + R+ G
Sbjct: 173 LCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGI 232
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ T+ ++D F + K +S+ VF M +G+ + VTY S+++ L N G V+ A
Sbjct: 233 CPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATA 292
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ ++M P I+++ A + N VK+A +++ +M ++G+ PN TY +L++
Sbjct: 293 LRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYC 352
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ E+A ++ M GV PD + N LI C+ G+
Sbjct: 353 KDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSM---KYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
RG + + TY T++D + + +I M + + M+ GI + VT+ ++ +
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKN 251
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
V A+ ++ EM + P +V+Y + + L N +V EAT + +M+ L PN T+
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNA 311
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L+ + ++A E+F M + G+ P+ NILI+ CK + R M
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIM 367
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + TY ++D + + + + ++ +M KG+ D TY ++ L GD++
Sbjct: 335 QGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEA 394
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A N+ EM K +++Y + L +K+A + EM ++GL P+ TY +++
Sbjct: 395 ARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMID 454
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ G AL + S+M++ G + A N+LI+ CK
Sbjct: 455 GYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 158/422 (37%), Gaps = 78/422 (18%)
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
F+ + G+ + + +M L G++ +++EM + PT++S+ + L
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCK 175
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLME---YLVRAGKYEEALEIFSKMQEAGVQPD 205
++ +A D+ ++M RG+ N TY L++ + + GK +A I +M+ G+ P+
Sbjct: 176 VGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPN 235
Query: 206 KAACNILIEKCCKAGETRTIILILRYMKENRLALR-----YPVFKEALQTFKVADENDSL 260
+ NILI+ CK + + M NR ++ Y L +E +L
Sbjct: 236 EVTFNILIDGFCKDKNVSAAMKVFAEM--NRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293
Query: 261 LWQ-VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDK 319
Q V+ P I+ N L+ K K + L + +
Sbjct: 294 RDQMVNSCLKPNIITHN------------------ALLNGFCKNKMVKQAGELFDDMPKQ 335
Query: 320 SIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKV 379
I + + +I+ C + A + + + + + Y LI L +
Sbjct: 336 GITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAA 395
Query: 380 AEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYF 439
+V EM +L A LI TY LI
Sbjct: 396 RNLVSEMDTK------HLKADLI---------------------------TYNILIDSLC 422
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG----------------LEKLGRVSDAE 483
+ G KAL++ MCRKG+ PS T+N ++ G +EK+GR+++
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVA 482
Query: 484 IY 485
Y
Sbjct: 483 TY 484
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/490 (19%), Positives = 181/490 (36%), Gaps = 76/490 (15%)
Query: 12 LKYSTWDSAQDLLKNLPIKWDSYTVNQVLK-----THPPMEKAWLFFNWVSRSR--GFNH 64
+ YST + Q LL + DS+ N ++ + + L F R+ G
Sbjct: 70 INYSTQEQTQILL---SVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKL 126
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ ++ + I M++V++ M + I +++ V++ L G ++ A +I
Sbjct: 127 SVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDII 186
Query: 125 EEMKLKECYPTIVSYT----AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
E+MK++ +++Y Y K+ + ++ +A + KEM G+ PN T+ +L++
Sbjct: 187 EDMKVRGVSANVITYNTLIDGYCKMGKIG-KMYKADAILKEMRADGICPNEVTFNILIDG 245
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+ A+++F++M GV+P+ N LI C G+ ALR
Sbjct: 246 FCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEAT-----------ALR 294
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
+ L+ P I+ N L+
Sbjct: 295 DQMVNSCLK--------------------PNIITHN------------------ALLNGF 316
Query: 301 LKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K K + L + + I + + +I+ C + A + + + +
Sbjct: 317 CKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDV 376
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
+ Y LI L + +V EM + +LI L + A ++
Sbjct: 377 STYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL-- 434
Query: 421 LPEDQKCTA-------TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
D+ C TY +I Y G+ AL + M + G ++ T+NVL+ G
Sbjct: 435 ---DEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGF 491
Query: 474 EKLGRVSDAE 483
K ++ DA
Sbjct: 492 CKKDKLEDAN 501
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 9/233 (3%)
Query: 67 FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
T+ +L+ F + K + +F+ M ++GI + TY ++ +++ A ++
Sbjct: 307 ITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRI 366
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M K P + +Y + L ++ A ++ EM + L + TY +L++ L G+
Sbjct: 367 MLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGE 426
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM-KENRLA--LRYPV 243
++AL + +M G++P + N +I+ CK G R + + M K RLA Y V
Sbjct: 427 MKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNV 486
Query: 244 F-KEALQTFKVADENDSLLWQVHPQFSP-----EFISDNDAVEFVTTDIEGPL 290
K + K+ D N L + P E +++ + DIEG L
Sbjct: 487 LIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHL 539
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A+ + + +G D TY ++ + + + + M K + D +TY
Sbjct: 357 MEDAFALY-RIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYN 415
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L N G++ A+ + +EM K P+ ++Y + ++ A ++ +M +
Sbjct: 416 ILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKV 475
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
G N TY VL++ + K E+A + ++M E G+ P++ I+ E+ + G
Sbjct: 476 GRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH---RLGSARRPVPAAKIF 418
++ +I L K+ K +I+E+M G S V LI ++G + A I
Sbjct: 165 SFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAIL 224
Query: 419 SLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ D C T+ LI + + A+K++ M R+G+ P++ T+N L+ GL
Sbjct: 225 KEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNN 284
Query: 477 GRVSDAEIYRKE 488
G+V++A R +
Sbjct: 285 GKVNEATALRDQ 296
>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14770, mitochondrial; Flags: Precursor
Length = 940
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 179/449 (39%), Gaps = 63/449 (14%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT ++D +A +SS +++ M EK + + VTY+S+++ G ++ AV++ +M
Sbjct: 368 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 427
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ + P +Y + LF + + A ++ KEM G+ N Y L+ +L R G+
Sbjct: 428 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 487
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVF 244
+E + M GV D+ LI+ K G+ + M+E + + Y V
Sbjct: 488 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 547
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
+ F + + P+ + N + + + +G++ + K K
Sbjct: 548 ISGMLKFGKVGADWAYKGMREKGIEPDIATFN-----IMMNSQRKQGDSEGILKLWDKMK 602
Query: 305 NLVAIDSLLS-----------GIMDKSIQLDSAVI-----------STIIEVNCDHRRRD 342
+ SL+S G M+++I + + ++ ++ + H+R D
Sbjct: 603 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 662
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
E + + L R Y LI L KL K A ++ +M G
Sbjct: 663 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG------------ 710
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
+P+ T T+ +L+ YF KAL Y M GI P+
Sbjct: 711 -----------------FIPD----TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 749
Query: 463 LGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
+ T+N ++ GL G + + + + E KS
Sbjct: 750 VATYNTIIRGLSDAGLIKEVDKWLSEMKS 778
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 208/519 (40%), Gaps = 71/519 (13%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNH 64
++ K A LL+N I D+ T N V+ H ++A+ F + + + G
Sbjct: 138 IHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK-MGILP 196
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQE----------------------------KG 96
D +Y T++D F + K + + + E G
Sbjct: 197 DTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSG 256
Query: 97 INIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEAT 156
+ D VT++S+++ L G V + EM+ YP V+YT + LF + + A
Sbjct: 257 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 316
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
+Y +M+ RG+P + YTVLM+ L +AG EA + F + E P+ L++
Sbjct: 317 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 376
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVADENDSLLWQVHPQ-FSPEF 272
CKAG+ + I+ M E + + + + + +E SLL ++ Q P
Sbjct: 377 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 436
Query: 273 ISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTII 332
+ T I+G + + I L K + L G+ + + LD+ V
Sbjct: 437 FT-------YGTVIDGLFKAGKEEMAIELSK------EMRLIGVEENNYILDALV----- 478
Query: 333 EVNCDHRRRDGALLAFEYSVK----MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTK 388
+H +R G + + VK + L++ Y +LI + K EEM +
Sbjct: 479 ----NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE 534
Query: 389 AGH-----SLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGS 443
G S V + +L A + + P+ AT+ ++ G
Sbjct: 535 RGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPD----IATFNIMMNSQRKQGD 590
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ LK++ M GI PSL + N+++ L + G++ +A
Sbjct: 591 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEA 629
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 191/455 (41%), Gaps = 25/455 (5%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + + +++ RI +K + + M KG+ +D + YTS++ GD
Sbjct: 463 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 522
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+ EEM+ + +VSY + + +V A YK M ++G+ P+ T+ ++
Sbjct: 523 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIM 581
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
M + G E L+++ KM+ G++P +CNI++ C+ G+ I IL M +
Sbjct: 582 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 641
Query: 238 A---LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
Y +F + K AD +++ H I ++ + L I
Sbjct: 642 HPNLTTYRIFLDTSSKHKRADA----IFKTHETLLSYGIK-------LSRQVYNTL-IAT 689
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L + KK +V D G + ++ +S + + H R+ AL + ++
Sbjct: 690 LCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG---SHVRK--ALSTYSVMMEA 744
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
++ Y +I L +V + + EM G + LI +
Sbjct: 745 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 804
Query: 415 AKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
I+ + D T+TY LI + + G +A ++ K M ++G+ P+ T+ +++G
Sbjct: 805 MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 864
Query: 473 LEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEK 507
L KL D E +K +A L K+ V EEK
Sbjct: 865 LCKLCTHPDVEWNKKAMYLAEAKGLLKEMV--EEK 897
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 140/348 (40%), Gaps = 16/348 (4%)
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLM-EYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
+R+ A M G+ P+ + L+ ++ V +++ I+SKM GV PD A
Sbjct: 74 ERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFA 133
Query: 209 CNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ-VHPQ 267
N+LI CK G I +LR + + Y L +ADE L + V
Sbjct: 134 LNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 193
Query: 268 FSPEFISDN---DAVEFVTTDIEGPLSIDQ-------GLVLILLKKKNLVAIDSLLSGIM 317
P+ +S N D V + +D+ ++L NL AI+ ++
Sbjct: 194 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMV 253
Query: 318 DKSIQLDSAVISTIIEVNCDHRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTF 376
D S+II C + +G LL E +M + Y L+ L K N +
Sbjct: 254 MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME-EMSVYPNHVTYTTLVDSLFKANIY 312
Query: 377 PKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTAL 434
+ +M G + + + +L+ L A A K F +L ED + TYTAL
Sbjct: 313 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 372
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ AG A I M K + P++ T++ ++ G K G + +A
Sbjct: 373 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 420
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 30/201 (14%)
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+S + ++ I +D+ +T+I C+H D A VKM + + +Y LI K
Sbjct: 151 ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK 210
Query: 373 LNTFPKVAEIVEE----------------------------MTKAGHSLGVYLGALLIHR 404
+ F + +V+E M +G V + +I+R
Sbjct: 211 VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINR 270
Query: 405 LGSARRPVPAAKIFSLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPS 462
L + + + + E TYT L+ F A AL +Y M +GI
Sbjct: 271 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 330
Query: 463 LGTFNVLLAGLEKLGRVSDAE 483
L + VL+ GL K G + +AE
Sbjct: 331 LVVYTVLMDGLFKAGDLREAE 351
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 169/411 (41%), Gaps = 24/411 (5%)
Query: 87 YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+V+E M + I VT+ +++ L G A + M++ P +V+Y +
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
L + + A+ ++K M + L P+CYTY + L + + EEA + K+ E+G+ P+
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQ 263
N LI+ CC G+ M + Y + AL K +E + ++ +
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382
Query: 264 VHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ 322
+ + P+ ++ N + G KK L SL +++K+I+
Sbjct: 383 MREKGVEPDVVTYNIQI--------------NGYCRCGNAKKAL----SLFDEMVEKNIR 424
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
+++I+V R A F+ S+K + + + ALI + ++
Sbjct: 425 PTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQL 484
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFS 440
++EM A L+ R+ A K+ + E + +Y LI Y
Sbjct: 485 LKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSK 544
Query: 441 AGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
G AL+++ M G P+L T+N L+ G K+G AE +E +S
Sbjct: 545 RGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQS 595
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 181/456 (39%), Gaps = 89/456 (19%)
Query: 17 WDSAQDLLKNLPI---KWDSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYT 70
W A+D + ++ + K + T N V+ + E A F + + + D +TY
Sbjct: 233 WKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM-KDKNLKPDCYTYN 291
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
+ + + +RI V + E G+ +AVTY +++ N GD+D A +EM +
Sbjct: 292 SFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNR 351
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
++ +Y + LFL R++EA D+ KEM ++G+ P+ TY + + R G ++A
Sbjct: 352 GIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKA 411
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
L +F +M E ++P ET T LI + K NR++ EA +
Sbjct: 412 LSLFDEMVEKNIRP--------------TVETYT-SLIDVFGKRNRMS-------EAEEK 449
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
FK + + L P+ I N ++ + G +ID+
Sbjct: 450 FKKSIKEGML---------PDIIMFNALIDGHC--VNG--NIDRAF-------------- 482
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
LL + + + D +T+++ C R+ + A + + + + +Y LI
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTAT 430
K E+ +EM G + LL T
Sbjct: 543 SKRGDMKDALEVFDEMLSLG-----FDPTLL----------------------------T 569
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
Y ALI Y G AD A ++ + M KGI P T+
Sbjct: 570 YNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TYT+++D+FG+ R+S + F+ ++G+ D + + +++ G++D A + +EM
Sbjct: 429 TYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ P V++ M+ +V+EA + EM +RG+ P+ +Y L+ + G
Sbjct: 489 DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDM 548
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
++ALE+F +M G P N LI+ K GE +LR M+ + +
Sbjct: 549 KDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYV 608
Query: 248 LQTFKVAD---END 258
++ K D END
Sbjct: 609 IEAMKTNDDLVEND 622
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 167/395 (42%), Gaps = 37/395 (9%)
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ MK E P + + + +L +++K A VY+EM++ + + T+ ++
Sbjct: 164 DEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIM 223
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L R GK+++A + M+ GV+P+ N +I C G+ I + MK+ L
Sbjct: 224 INILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNL 283
Query: 238 ---ALRYPVFKEALQTFKVADENDSLLWQ-VHPQFSPEFISDNDAVEFVTT--DIEGPLS 291
Y F L + +E +L + + P ++ N ++ D++ +
Sbjct: 284 KPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFA 343
Query: 292 -----IDQGLV--------LI--LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN- 335
+++G+V LI L +K + + ++ + +K ++ D V++ I++N
Sbjct: 344 YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPD--VVTYNIQING 401
Query: 336 -CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG 394
C AL F+ V+ ++ Y +LI + K N + E ++ K G
Sbjct: 402 YCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPD 461
Query: 395 VYLGALLI--HRLGSARRPVPAAKIFSLLPEDQKCT-----ATYTALIGVYFSAGSADKA 447
+ + LI H + + F LL E T+ L+ Y ++A
Sbjct: 462 IIMFNALIDGHCVNGN-----IDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEA 516
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
K+ M +GI P ++N L++G K G + DA
Sbjct: 517 KKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDA 551
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 62/115 (53%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ T++ + +++ K + + M+E+GI D ++Y +++ S GD+ A+ ++
Sbjct: 496 DEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVF 555
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+EM PT+++Y A ++ A ++ +EM +G+ P+ TY ++E
Sbjct: 556 DEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIE 610
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 4/192 (2%)
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
A + + DK+++ D ++ I C RR + A ++ L Y ALI
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--Q 425
K +EM G V+ LLIH L +R A + + E +
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE 389
Query: 426 KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
TY I Y G+A KAL ++ M K I P++ T+ L+ K R+S+AE
Sbjct: 390 PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE-- 447
Query: 486 RKEKKSIQADAL 497
K KKSI+ L
Sbjct: 448 EKFKKSIKEGML 459
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG D +Y T++ + + + VF+ M G + +TY +++ S G+
Sbjct: 524 KERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEA 583
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD 157
D A + EM+ K P +Y ++ + ND + E D
Sbjct: 584 DHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVENDD 623
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 113/527 (21%), Positives = 208/527 (39%), Gaps = 79/527 (14%)
Query: 31 WDSYTV--NQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
+ SY V + ++ + P A +F+ +S+ G +T+ ++ + + +
Sbjct: 173 FKSYNVVLDILVSANCPSVAANVFYEMLSK--GVIPTVYTFGVVMKALCMVNEVDNACSL 230
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
M + G ++V Y +++H LS V+ A+ + EEM L C P + ++ + L
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA------------------ 190
+R+ E + M+ RG PN TY VLM L R GK +EA
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTIL 350
Query: 191 --------------LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
++ KM + G +PD N LI CK G + + ++ M N
Sbjct: 351 INGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG 410
Query: 237 LALRYPVFKEALQTF---KVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSI 292
+ L F +E +L ++ + F + N + + + + P ++
Sbjct: 411 CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKAL 470
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
D +L + DK + D +T+I C R++ AL + +
Sbjct: 471 D------------------MLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDML 512
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLG--VYLGAL-LIHRLGSAR 409
+ Y LI ++ + ++V +M G L Y G + +LG+
Sbjct: 513 LDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATE 572
Query: 410 RPVPAAKIF------SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
+ A +F L+P + C L V G AL++ + M +G+ P +
Sbjct: 573 K---ALGLFDEMVRKDLVPSNISCNLLINGLCRV----GKVCNALELLRDMIHRGLAPDV 625
Query: 464 GTFNVLLAGLEKLGRVSDA-EIYRKEKKSIQADALSKDAVPMEEKIC 509
T+N L+ GL K+G + +A ++ K +QA+ + DA+ IC
Sbjct: 626 VTYNSLINGLCKMGNIREAFNLFNK----LQAEGIQPDAITYNTLIC 668
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 22/292 (7%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + TYTT+LD F + ++ YV M KG ++ + Y ++ L G V
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVP 467
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+++ EM K C P I ++ + L DR ++A +Y++M+ G+ N TY L+
Sbjct: 468 KALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLI 527
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+R G +EAL++ + M G D+ N LI+ CK G T + + M L
Sbjct: 528 HAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLV 587
Query: 239 ---LRYPVFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ + L + KV + + L +H +P+ ++ N S+
Sbjct: 588 PSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYN--------------SLIN 633
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
GL K N+ +L + + + IQ D+ +T+I +C D A L
Sbjct: 634 GLC----KMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYL 681
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 176/476 (36%), Gaps = 79/476 (16%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+Y +LDI A S VF M KG+ T+ VM L +VD A ++ +M
Sbjct: 175 SYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDM 234
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C P V Y + L DRV EA + +EM G P+ T+ ++ L R +
Sbjct: 235 TKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRI 294
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAG----------------ETRTIILILRY 231
E ++ +M G P+ +L+ C+ G + ILI Y
Sbjct: 295 HEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGY 354
Query: 232 MKENRLALRYPVFKEALQTFKVADENDSLLWQ--VHPQFSPEFISDNDAVEFV------- 282
+K RL DE ++ L+ + P+ + N + +
Sbjct: 355 VKSGRL-----------------DEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMG 397
Query: 283 -TTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRR 341
D+ +S + NL+ +LL G K+ QL+ A
Sbjct: 398 SAVDMVNDMSANGC-------TPNLITYTTLLDGFCKKN-QLEEA--------------- 434
Query: 342 DGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALL 401
G +L + +LN+ Y L+ L K PK +++ EM+ G ++ L
Sbjct: 435 -GYVLNEMSAKGFELNI--MGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTL 491
Query: 402 IHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
I L R A ++ LL T TY LI + G+ +ALK+ M +G
Sbjct: 492 IFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGC 551
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVPMEEKICDLLYGG 515
T+N L+ KLG A + + + KD VP C+LL G
Sbjct: 552 PLDEITYNGLIKAFCKLGATEKA-------LGLFDEMVRKDLVPSNIS-CNLLING 599
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T++ F I + M +G +D +TY ++ G + A+ +++EM
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEM 581
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K+ P+ +S + L +V A ++ ++MI RGL P+ TY L+ L + G
Sbjct: 582 VRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNI 641
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
EA +F+K+Q G+QPD N LI C+AG L+L EN
Sbjct: 642 REAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVEN 689
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 163/415 (39%), Gaps = 83/415 (20%)
Query: 69 YTTMLDIFGEAKRISSMK-YVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
+T +++ + ++ R+ ++++ M + G D T+ +++H L G + AV++ +M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
C P +++YT + ++++EA V EM +G N Y VL+ L + GK
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+AL++ +M + G +PD N LI CK KE+ LAL +++
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDR-----------KEDALAL----YRDM 511
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
L +A + V + T L+ L+ +
Sbjct: 512 LLDGVIA----------------------NTVTYNT------------LIHAFLRGGAIQ 537
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
L++ ++ + LD + +I+ C + AL F+ V+ DL + LI
Sbjct: 538 EALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLI 597
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L ++ E++ +M IHR L P+
Sbjct: 598 NGLCRVGKVCNALELLRDM---------------IHR--------------GLAPD---- 624
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY +LI G+ +A ++ + +GI P T+N L+ + G DA
Sbjct: 625 VVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDA 679
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 1/181 (0%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F W +G+ H Y ++D G AK + + ++E+GI + +M +
Sbjct: 89 FQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYG 148
Query: 113 NAGDVDGAVNIWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
A A + +MK + C PT SY + IL + A +V+ EM+ +G+ P
Sbjct: 149 RANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTV 208
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
YT+ V+M+ L + + A + M + G P+ LI K + +L
Sbjct: 209 YTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEE 268
Query: 232 M 232
M
Sbjct: 269 M 269
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 70/156 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TY ++ F + +F+ M K + ++ +++ L G V
Sbjct: 549 RGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCN 608
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + +M + P +V+Y + + L ++EA +++ ++ G+ P+ TY L+
Sbjct: 609 ALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLIC 668
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+ RAG +++A + + E P+ IL+
Sbjct: 669 WHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSN 704
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 191/473 (40%), Gaps = 26/473 (5%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNX 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + +++ + E Y LI K + K
Sbjct: 287 APTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAV 346
Query: 381 EIVEEMT------KAGHSLGVYLGAL--LIHRLGSARRPVPAAKIFSLLPE--DQKCTAT 430
++++++ + +L + A +I L + + A + L + Q TA
Sbjct: 347 KLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQXXKAETLVRQLXKLGVQDXTAL 406
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 407 NTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 458
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y L V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 183/434 (42%), Gaps = 30/434 (6%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
S R F+ D Y + + + R + ++ M G ++ TY+ + L
Sbjct: 38 SSYRVFSSD---YNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKK 94
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ + +M+ P I ++ Y+ +L ++V A + M+QRG P+ +YT+
Sbjct: 95 FELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII-LILRYMKEN 235
L+ L RAGK +A+EI++ M +GV PD AC L+ C A + ++ +K
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
R+ L V+ + F A + + F + + D VT ++ D
Sbjct: 215 RVKLSIVVYNALISGFCKAGRIEKA--EALKSFMSKIGCEPD---LVTYNVLLNYYYDNN 269
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC--DHRRRDGALLAFEYSVK 353
+LK+ V + + SG IQLD+ + +++ +C H R + + E +
Sbjct: 270 ----MLKRAEGVMTEMVRSG-----IQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPR 320
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
++ +Y LI + + K ++ EEM + G V LI
Sbjct: 321 GFCDV--VSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSV 378
Query: 414 AAKIFSLLPE-----DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
A K+ + E D+ YT ++ +G+ DKA I+ M I P ++N
Sbjct: 379 AKKLLDQMTELGLSPDR---IFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNS 435
Query: 469 LLAGLEKLGRVSDA 482
L++GL + GRV++A
Sbjct: 436 LISGLCRSGRVTEA 449
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 29 IKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSM 85
I+ D+Y+ NQ+LK H + ++ + F RGF D +Y+T+++ F A
Sbjct: 286 IQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGF-CDVVSYSTLIETFCRASNTKKA 344
Query: 86 KYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+FE M++KGI + VT+TS++ G+ A + ++M P + YT +
Sbjct: 345 YKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDH 404
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L + V +A ++ +MI+ + P+ +Y L+ L R+G+ EA+++F M+ PD
Sbjct: 405 LCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPD 464
Query: 206 KAACNILI 213
+ +I
Sbjct: 465 ELTFKFII 472
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 160/396 (40%), Gaps = 39/396 (9%)
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
+ Y S + L +G +D AV +++EM+ Y ++ +L R + A +Y++
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M+ G +TY+ + L + K+E + M+ G PD A NI ++ C
Sbjct: 70 MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLC---- 125
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTF----KVADENDSLLWQVHPQFSPEFISDND 277
+EN++ A+QTF + E D + + + D
Sbjct: 126 -----------RENKVGF-------AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTD 167
Query: 278 AVEFVTTDIEGPLSIDQ----GLVLILLKKKNL-VAIDSLLSGIMDKSIQLDSAVISTII 332
AVE I +S D LV+ L + + +A + + I ++L V + +I
Sbjct: 168 AVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALI 227
Query: 333 EVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHS 392
C R + A + K+ + Y L+ N + ++ EM ++G
Sbjct: 228 SGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQ 287
Query: 393 LGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQK----C-TATYTALIGVYFSAGSADKA 447
L Y L+ R P + +S + ++ + C +Y+ LI + A + KA
Sbjct: 288 LDAYSYNQLLKRHCRVSHP---DRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKA 344
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
K+++ M +KGI ++ TF L+ + G S A+
Sbjct: 345 YKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAK 380
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 180/451 (39%), Gaps = 64/451 (14%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D T+++ + + V E++++ G D +TY ++ G++
Sbjct: 139 RGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGS 198
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + + M + P +V+Y ++ L + ++KEA +V +QR P+ TYT+L+E
Sbjct: 199 ALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIE 255
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK----EN 235
+ +A+++ +M++ G +PD N+LI CK G I L +M +
Sbjct: 256 ATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQP 315
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
+ + + T + D L + SP ++ N + F
Sbjct: 316 NVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINF-------------- 361
Query: 296 LVLILLKKKNLV--AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVK 353
L +K L+ AID +L + +S + ++ C ++ + A+ + V
Sbjct: 362 -----LCRKGLIGRAID-VLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS 415
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ Y L+ L K EI+ ++ G S PV
Sbjct: 416 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCS------------------PV- 456
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
TY +I G D A+K+ M KG+ P + T++ L+ GL
Sbjct: 457 --------------LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGL 502
Query: 474 EKLGRVSDAEIYRK--EKKSIQADALSKDAV 502
+ G+V +A + E+ ++ +A++ +++
Sbjct: 503 SREGKVDEAIAFFHDLEEMGVKPNAITYNSI 533
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + +Y +L + K++ ++M +G D VTY +++ L G VD
Sbjct: 381 HGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 440
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
AV I ++ K C P +++Y + L + +A + EM +GL P+ TY+ L+
Sbjct: 441 AVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVG 500
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L R GK +EA+ F ++E GV+P+ N ++ CKA +T I L YM
Sbjct: 501 GLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYM 553
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 19 SAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRS--RGFNHDRFTYTTMLDIF 76
SA LL + + D T N +L+T K + R R D TYT +++
Sbjct: 198 SALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEAT 257
Query: 77 GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTI 136
+ + + + M++KG D VTY +++ + G +D A+ M C P +
Sbjct: 258 CKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNV 317
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
+++ ++ + R +A EMI++G P+ T+ +L+ +L R G A+++ K
Sbjct: 318 ITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEK 377
Query: 197 MQEAGVQPDKAACNILIEKCCK 218
M + G P+ + N L+ CK
Sbjct: 378 MPQHGCTPNSLSYNPLLHALCK 399
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 20 AQDLLKNLP---IKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A D+L+ +P +S + N +L ME+A + + + SRG D TY T+L
Sbjct: 371 AIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLD-IMVSRGCYPDIVTYNTLL 429
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ ++ + + KG + +TY +V+ LS G D A+ + +EMK K
Sbjct: 430 TALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLK 489
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P I++Y+ + L +V EA + ++ + G+ PN TY +M L +A + A++
Sbjct: 490 PDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDF 549
Query: 194 FSKMQEAGVQPDKAACNILIE 214
+ M G +P + + ILIE
Sbjct: 550 LAYMVARGCKPTETSYMILIE 570
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 73/175 (41%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R +G D TY +++ + R+ M G + +T+ ++ + + G
Sbjct: 274 RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRW 333
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A EM K C P++V++ + L + A DV ++M Q G PN +Y L
Sbjct: 334 MDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPL 393
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
+ L + K E A+E M G PD N L+ CK G+ + IL +
Sbjct: 394 LHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 448
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 153/372 (41%), Gaps = 32/372 (8%)
Query: 137 VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSK 196
V +++ L N ++E ++M+ RG P+ T L+ L + GK +A +
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170
Query: 197 MQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY-PVFKEALQTFKVAD 255
++++G PD N+LI CK GE + + +L M + + Y + + + K+ +
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKE 230
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLI-----LLKKKNLVAID 310
+ L Q+ + P+ I+ +E + + Q + L+ K ++V +
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKES----GVGQAMKLLDEMRDKGCKPDVVTYN 286
Query: 311 SLLSGIMDKSIQLDSAV-----------------ISTIIEVNCDHRRRDGALLAFEYSVK 353
L++GI K +LD A+ + I+ C R A ++
Sbjct: 287 VLINGIC-KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 345
Query: 354 MDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
+ + LI L + + +++E+M + G + L+H L ++
Sbjct: 346 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405
Query: 414 AAKIFSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
A + ++ + C TY L+ G D A++I + KG P L T+N ++
Sbjct: 406 AIEYLDIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVI 464
Query: 471 AGLEKLGRVSDA 482
GL K+G+ DA
Sbjct: 465 DGLSKVGKTDDA 476
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + TY T++D + + + + M+ KG+ D +TY++++ LS G VD
Sbjct: 450 SKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVD 509
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ + +++ P ++Y + M L + A D M+ RG P +Y +L+
Sbjct: 510 EAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILI 569
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE 214
E L G +EALE+ +++ GV +A ++++
Sbjct: 570 EGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 605
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ +G D TY+T++ ++ F ++E G+ +A+TY S+M L A
Sbjct: 484 KGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQT 543
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
A++ M + C PT SY ++ L KEA ++ E+ RG+
Sbjct: 544 VRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 55 WVSRSRGF--NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
W + F N D TY+TM+D +G A + +++ + + ID T+++++
Sbjct: 236 WFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHG 295
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG+ DG +N++EEMK P +V Y + + R + +YKEMI+ G P+
Sbjct: 296 VAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWA 355
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY L+ RA E+AL ++ +M+E G+Q + N L+ C G + I + M
Sbjct: 356 TYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDM 415
Query: 233 KEN 235
K +
Sbjct: 416 KSS 418
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF+ TY ++L +G A+ V++ M+EKG+ ++ + Y +++ ++ G V+ A
Sbjct: 349 GFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA 408
Query: 121 VNIWEEMKLK-ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
V I+++MK C P ++++ + I +V EA ++ +M++ G PN + T L++
Sbjct: 409 VEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQ 468
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
+A + ++ + F+++ E G+ PD C L+
Sbjct: 469 CYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLL 502
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/419 (18%), Positives = 173/419 (41%), Gaps = 37/419 (8%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y L +F + + + + +FE M +G+ D VT+++++ AV +E+M
Sbjct: 182 YNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMP 241
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
+C P V+Y+ + V A +Y + T++ +++ AG Y+
Sbjct: 242 SFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYD 301
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF---- 244
L ++ +M+ G++P+ N L++ +A I I + M +N + + +
Sbjct: 302 GCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLL 361
Query: 245 ---------KEALQTFKVADEN----DSLLWQVHPQFSPEFISDNDAVE-FVTTDIEGPL 290
++AL +K E + +L+ + N+AVE F G
Sbjct: 362 RAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTC 421
Query: 291 SID----QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
S D ++ I + + +L+ +++ + V++++I+ +R D +
Sbjct: 422 SPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVR 481
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPK--VAEIVEEMTKAGHSLGVYLGALLIHR 404
F +++ L + L+ ++ + PK + ++++ + +A LG + LL +
Sbjct: 482 TFNQLIELGLTPDDRFCGCLLNVITQT---PKGELGKLIDCVVRANPKLGFVVELLLGEQ 538
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA---------LKIYKTM 454
A+++FS++ D + A LI + + DKA L+IYK +
Sbjct: 539 DKEGNFRTEASELFSVVSADVR-KAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDL 596
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D ST+I+ D A ++ + + ++ + +I I + +
Sbjct: 248 DDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVY 307
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSA 441
EEM G + + L+ +G A+RP I+ + ++ ATY +L+ Y A
Sbjct: 308 EEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRA 367
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-EIYRKEKKS 491
+ AL +YK M KG+ ++ +N LLA +G V++A EI++ K S
Sbjct: 368 RYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSS 418
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 72/394 (18%), Positives = 146/394 (37%), Gaps = 48/394 (12%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V ++++ G NI V++ +SN+ A+ +++M LK TI Y +K+
Sbjct: 133 VADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDM-LKSSKQTIF-YNVTLKVFR 190
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
++ A +++EMI RG+ P+ T++ ++ +A+E F KM PD
Sbjct: 191 KCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFDCNPDDV 250
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
+ +I+ +AG + + + F ++ VA D L
Sbjct: 251 TYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL------ 304
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
N E I+ L I L+ + + K I ++ ++ A
Sbjct: 305 --------NVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWAT 356
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
++++ R + AL+ ++ + L L Y L+ + + + EI ++M
Sbjct: 357 YASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK 416
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKA 447
+G + P+ + T++++I +Y G +A
Sbjct: 417 SSG----------------------------TCSPD----SWTFSSMITIYSCGGKVSEA 444
Query: 448 LKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
++ M G P++ L+ K RV D
Sbjct: 445 EEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDD 478
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
+ T+ ++D F + +++ K VFE MQ +G+ + VTY S+++ L + G +D A+ +
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
++M P +V+Y A + +KEA ++ ++ +RGL PN T+ L++ +A
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA---LRY 241
G+ ++A + S M + GV P+ + N LI C+ G + + + M+ N L + Y
Sbjct: 418 GRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY 477
Query: 242 PVFKEAL 248
+ +AL
Sbjct: 478 NILVDAL 484
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/482 (22%), Positives = 184/482 (38%), Gaps = 95/482 (19%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+F W + G H+ + +L + AK + ++ + + + + +++ H L
Sbjct: 93 YFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNA----HYSNSTIFHSL 148
Query: 112 SNAGDVDGAVNI------WEEMKLKE----------------------CYPTIVSYTAYM 143
S G A +I W +K E C P +VS
Sbjct: 149 SVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS----- 203
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
L R+ VYKEMI+R + N T+ V++ L + GK+++A ++ M+ G
Sbjct: 204 --LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS 261
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
P N +I+ CKAG+ +L+ M R+ F + F DEN + +
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF-CRDENVTAAKK 320
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQL 323
V + QGL + N+V +SL++G+
Sbjct: 321 VFEEMQ-----------------------RQGL------QPNVVTYNSLINGL------- 344
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
C + + D AL + M L Y ALI K + E++
Sbjct: 345 ------------CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSA 441
+++ K G + V LI G A R A + S++ + C +TY LI +
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA-----EIYRKEKKSIQADA 496
G+ +A K+ K M G+ L T+N+L+ L K G A E+ EKK +A+
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANI 512
Query: 497 LS 498
++
Sbjct: 513 VT 514
>gi|224088126|ref|XP_002308333.1| predicted protein [Populus trichocarpa]
gi|222854309|gb|EEE91856.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Query: 19 SAQDLLKNLPIKWDSYTVNQVLK-THPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
S ++ L + + + V +VLK + A+ FFNWV GF H TY TML G
Sbjct: 156 SMEERLDKVGFQLEPEIVEKVLKRCYKVPHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAG 215
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
EA+ S + + E M++ D T+T ++ A V A+ + E+M+ C P +
Sbjct: 216 EAREFSVVDVLLEEMEKYSCERDIKTWTILIQQYGKAKLVGKALLVHEKMRKSGCEPDVE 275
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
Y + L + + A ++YKEM+QR + PN Y +L+ L ++G + M
Sbjct: 276 VYEVTLHSLCDAGKGEIALEIYKEMVQREMEPNLSLYKMLLNCLAKSGDVSAVQSVADDM 335
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV 243
P+ +++ C AG R + ++R +K + L Y V
Sbjct: 336 IRVSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQLDYEV 381
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 190/446 (42%), Gaps = 41/446 (9%)
Query: 71 TMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK 130
T++ A RI+ + E+M+ K +D Y +++ ++ A+++++ MK
Sbjct: 384 TLVKGLSRANRIADALEIVEIMKRKDF-VDGKVYGIIINGYLRRNELSKALDLFQSMKEF 442
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
PT +YT M+ LF ++ ++ ++Y EM++RG+ + ++ VR EA
Sbjct: 443 GHLPTTSTYTELMQHLFRSNEYQKCCELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEA 502
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
E+F M++ G++P + +I I++ CK T II +L M+ +++ + +F+ +
Sbjct: 503 WEVFETMEDKGIKPTWKSYSIFIKELCKVLRTDEIIKVLGKMQASKMFICDEIFEWVISC 562
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID-------QGLV----LI 299
+ E D++ S ND V E L +D QG V +
Sbjct: 563 MERKGEMDNIRKVKQMHRICRLHSLNDEVTRNDLSREEELHVDSNCNESVQGRVDWNSVK 622
Query: 300 LLKK----KNLVAIDSLLSGIMDKSI---QLDSAVISTIIEVNCDHRRRDG-----ALLA 347
L K ++L + +LS + D I L+ I E+ + R G AL
Sbjct: 623 PLSKAYDEQDLQEVLRILSSLEDWPIIQDALEKCTIQFTPELVAETLRNCGMHGNAALHF 682
Query: 348 FEYSVKMDLNLERT-AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
F + K + + T Y + + + F + + EM + G + A++I + G
Sbjct: 683 FAWVGKQNGFCQTTETYNMAMKVSGRGKDFKHMRSLFYEMRRRGFLIPPDTWAIMIMQYG 742
Query: 407 SARRPVPAAKIFSLL------PEDQKCTATYTALIGVYFSAG----SADKALKIYKTMCR 456
A KIF + P D +TY LI F G D+A+KI++ M R
Sbjct: 743 RTGLTEIALKIFGEMKASGCNPND----STYKYLI--IFLCGRKGRKVDEAIKIFREMIR 796
Query: 457 KGIHPSLGTFNVLLAGLEKLGRVSDA 482
G P L L ++G++ +A
Sbjct: 797 AGHVPDKELVGTYLCCLCEVGKLLEA 822
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
DR+T+ +++ + R+ + M++ GIN YTS++ A+ I+
Sbjct: 871 DRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVHFFREKLASKALEIF 930
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E MK + C PTIV+Y+A ++ + V EA +V+ + +G P+ TY++ + L RA
Sbjct: 931 ESMKQEGCEPTIVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRA 990
Query: 185 GKYEEALEIFSKMQEAGVQP 204
GK EEAL++ S M + G+ P
Sbjct: 991 GKSEEALQLLSDMVDNGIVP 1010
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Query: 17 WDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWL-FFNWVSRSRGFNHDRFTYTTMLDI 75
W QD L+ I++ V + L+ A L FF WV + GF TY + +
Sbjct: 646 WPIIQDALEKCTIQFTPELVAETLRNCGMHGNAALHFFAWVGKQNGFCQTTETYNMAMKV 705
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
G K M+ +F M+ +G I T+ ++ G + A+ I+ EMK C P
Sbjct: 706 SGRGKDFKHMRSLFYEMRRRGFLIPPDTWAIMIMQYGRTGLTEIALKIFGEMKASGCNPN 765
Query: 136 IVSYTAYMKILFLNDR----VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
+Y Y+ I+FL R V EA +++EMI+ G P+ + L GK EA
Sbjct: 766 DSTY-KYL-IIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLCCLCEVGKLLEAR 823
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ + +AG A+ ++ I C+AG
Sbjct: 824 KSVDSLCKAGFTV-PASYSLYIRALCRAG 851
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G N YT+++ F K S +FE M+++G VTY++++ + +V A
Sbjct: 902 GINPTVHVYTSLIVHFFREKLASKALEIFESMKQEGCEPTIVTYSALIRGYMDTENVIEA 961
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N++ +K K P +Y+ ++ L + +EA + +M+ G+ P+ + +
Sbjct: 962 WNVFHSLKTKGPAPDFKTYSMFLSCLCRAGKSEEALQLLSDMVDNGIVPSNVNFRTVFFG 1021
Query: 181 LVRAGKYEEALEIFSK 196
L R GK A + K
Sbjct: 1022 LNREGKQSLAQTVLQK 1037
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 147/368 (39%), Gaps = 34/368 (9%)
Query: 124 WEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV---YKEMIQRGLPPNCYTYTVLMEY 180
W + K C+ T Y +L+ +E + V +EM + + T+T+L++
Sbjct: 193 WVKTKDGFCHTT----KTYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIQQ 248
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
+A +AL + KM+++G +PD + + C AG+ + I + M + +
Sbjct: 249 YGKAKLVGKALLVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQREMEPN 308
Query: 241 YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL 300
++K L + D AV+ V D+ I + V +
Sbjct: 309 LSLYKMLLNCLAKS-------------------GDVSAVQSVADDMIRVSQIPEHDVHVC 349
Query: 301 LKKKNLVAID-----SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
+ K VA L+ + +K IQLD V T+++ R AL E + D
Sbjct: 350 VLKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLVKGLSRANRIADALEIVEIMKRKD 409
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
++ Y +I ++ N K ++ + M + GH L+ L +
Sbjct: 410 F-VDGKVYGIIINGYLRRNELSKALDLFQSMKEFGHLPTTSTYTELMQHLFRSNEYQKCC 468
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+++ + E + + A++ + +A ++++TM KGI P+ ++++ + L
Sbjct: 469 ELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIKPTWKSYSIFIKEL 528
Query: 474 EKLGRVSD 481
K+ R +
Sbjct: 529 CKVLRTDE 536
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 143/352 (40%), Gaps = 54/352 (15%)
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRG--LPPNCYTYTVLMEYLVRAGKYEEALE 192
T +Y MK+ K ++ EM +RG +PP+ T+ +++ R G E AL+
Sbjct: 695 TTETYNMAMKVSGRGKDFKHMRSLFYEMRRRGFLIPPD--TWAIMIMQYGRTGLTEIALK 752
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
IF +M+ +G P+ + LI I L R ++ A++ +F+E ++
Sbjct: 753 IFGEMKASGCNPNDSTYKYLI-----------IFLCGRKGRKVDEAIK--IFREMIRAGH 799
Query: 253 VADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSL 312
V D+ E V T + + + LL+ + ++DSL
Sbjct: 800 VPDK-----------------------ELVGTYLCCLCEVGK-----LLEARK--SVDSL 829
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
K+ A S I C + AL + L+R + +L+ L++
Sbjct: 830 C-----KAGFTVPASYSLYIRALCRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGLLQ 884
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTAT 430
+ V+ M + G + V++ LI + A +IF + ++ + T
Sbjct: 885 KGRLEEALAKVDSMKQVGINPTVHVYTSLIVHFFREKLASKALEIFESMKQEGCEPTIVT 944
Query: 431 YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
Y+ALI Y + +A ++ ++ KG P T+++ L+ L + G+ +A
Sbjct: 945 YSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRAGKSEEA 996
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D+ T L E ++ + + + + G + A +Y+ + L AG ++ A
Sbjct: 798 GHVPDKELVGTYLCCLCEVGKLLEARKSVDSLCKAGFTVPA-SYSLYIRALCRAGMLEEA 856
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+++ +++ ++ ++ + + L R++EA M Q G+ P + YT L+ +
Sbjct: 857 LSLVDQVSTEKTTLDRYTHASLVHGLLQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVH 916
Query: 181 LVRAGKYEEALEIFSKMQEAGVQP 204
R +ALEIF M++ G +P
Sbjct: 917 FFREKLASKALEIFESMKQEGCEP 940
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 184/446 (41%), Gaps = 60/446 (13%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDR-FTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVT 103
P+ ++ FFNW + ++H Y M+D+ G+ ++ ++ +LM+ + + I T
Sbjct: 129 PLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIET 188
Query: 104 YTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI 163
+T ++ AG AV+ + M+ C P ++++ + L R EA + +
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK 248
Query: 164 QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
R P+ YT L+ RAG+ EA ++F +M+ AG++P+ +I+I+ C+ G+
Sbjct: 249 DR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 224 TIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQF-----SPEFISDNDA 278
+ M ++ A F ++ A + +L QV+ Q P+ I+ N
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVL-QVYNQMKKLGCEPDTITYNFL 366
Query: 279 VEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDH 338
+E D +NL +L+ ++ K +++++ +TI
Sbjct: 367 IEAHCRD------------------ENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKK 408
Query: 339 RRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLG 398
R +GA YS M+ E IL+++ K ++V +M K
Sbjct: 409 RDVNGAHRM--YSKMMEAKCEPNT--VTYNILMRMFVGSKSTDMVLKMKKEMDD------ 458
Query: 399 ALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMC-RK 457
E + TY L+ ++ G + A K++K M K
Sbjct: 459 -----------------------KEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ PSL + ++LA L + G++ E
Sbjct: 496 CLTPSLSLYEMVLAQLRRAGQLKKHE 521
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 32 DSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
++ T N +++ H EK +N + + G D TY +++ + + + V
Sbjct: 324 NAITFNNLMRVHVKAGRTEKVLQVYNQMKK-LGCEPDTITYNFLIEAHCRDENLENAVKV 382
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
M +K ++A T+ ++ ++ DV+GA ++ +M +C P V+Y M++
Sbjct: 383 LNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVG 442
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM-QEAGVQPDKA 207
+ + KEM + + PN TY +L+ G + A ++F +M +E + P +
Sbjct: 443 SKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLS 502
Query: 208 ACNILIEKCCKAGETR 223
+++ + +AG+ +
Sbjct: 503 LYEMVLAQLRRAGQLK 518
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 399 ALLIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRK 457
+++I L RR A F SL + YT L+ + AG +A K++K M
Sbjct: 225 SIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLA 284
Query: 458 GIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
GI P++ T+++++ L + G++S A + AD L P
Sbjct: 285 GIEPNVYTYSIVIDALCRCGQISRAH-------DVFADMLDSGCAP 323
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D TY+ M+D +G A + +++ + + ID VT+++++ +G+ DG
Sbjct: 241 GCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGC 300
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+N++EEMK P +V Y + + R +A ++YKEM GL P+ TY L+
Sbjct: 301 LNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRA 360
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
RA E+AL ++ +M+E G++ N L+ C G T I MK +
Sbjct: 361 YGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSS 415
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 177/400 (44%), Gaps = 31/400 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSM--KYV--FELMQEKGINIDAVTYTSVMHWLSNAG 115
RG D T++T++ R+SS+ K V FE M E G + D VTY++++ AG
Sbjct: 205 RGVKPDNITFSTII----SCARVSSLPNKAVEWFEKMPEFGCHPDDVTYSAMIDAYGRAG 260
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+VD A+ +++ + ++ V+++ ++I ++ +VY+EM G+ PN Y
Sbjct: 261 NVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYN 320
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
L++ + RA + +A I+ +M G+QP L+ +A +++ + MKE
Sbjct: 321 TLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEK 380
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSID-- 293
L L ++ L AD ++ A F G D
Sbjct: 381 GLELSVVLYNTLLAM--CADVG---------------YTEEAAAIFEDMKSSGNCMPDSW 423
Query: 294 --QGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
L+ I + +++L+ +++ + + V++++I+ R D + F+
Sbjct: 424 TFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRL 483
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
+++D+ + ++ ++ + + ++ ++++ + KA LG + LL + G
Sbjct: 484 LELDITPDDRFCGCMLNVMTQ-SPKEELGKLIDCIDKANPKLGNVVKLLLEEQNGEGTFR 542
Query: 412 VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIY 451
A+++F + D K A LI + + +KA +++
Sbjct: 543 KEASELFDSISADVK-KAYCNCLIDLCVNLNLLEKACELF 581
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTMLDIFGEAKR 81
+K L +K + N +L ++ W N + G TY +L +G A+
Sbjct: 307 MKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARY 366
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSYT 140
V++ M+EKG+ + V Y +++ ++ G + A I+E+MK C P +++
Sbjct: 367 AEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFS 426
Query: 141 AYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA 200
+ + I + +V EA + M++ G PN + T L++ +A + +E + F ++ E
Sbjct: 427 SLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLEL 486
Query: 201 GVQPDKAACNILI 213
+ PD C ++
Sbjct: 487 DITPDDRFCGCML 499
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 2/170 (1%)
Query: 324 DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIV 383
D S +I+ D AL ++ + ++ + LI I F +
Sbjct: 245 DDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVY 304
Query: 384 EEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSA 441
EEM G + + L+ +G A+RP A I+ + + Q TY AL+ Y A
Sbjct: 305 EEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRA 364
Query: 442 GSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKS 491
A+ AL +YK M KG+ S+ +N LLA +G +A ++ KS
Sbjct: 365 RYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKS 414
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/365 (16%), Positives = 134/365 (36%), Gaps = 48/365 (13%)
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
++ Y +K+ + A ++ EM++RG+ P+ T++ ++ + +A+E F
Sbjct: 176 VILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFE 235
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
KM E G PD + +I+ +AG + + + + + F ++ + ++
Sbjct: 236 KMPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSG 295
Query: 256 ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSG 315
D L N E ++ L I L+ + + K ++
Sbjct: 296 NFDGCL--------------NVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKE 341
Query: 316 IMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNT 375
+ + +Q + ++ R + AL+ ++ + L L Y L+ + +
Sbjct: 342 MTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGY 401
Query: 376 FPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALI 435
+ A I E+M +G+ +P+ + T+++LI
Sbjct: 402 TEEAAAIFEDMKSSGNC----------------------------MPD----SWTFSSLI 429
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
+Y +G +A + M G P++ L+ K R E+ R + ++ D
Sbjct: 430 TIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTD--EVVRTFDRLLELD 487
Query: 496 ALSKD 500
D
Sbjct: 488 ITPDD 492
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
+++ G D F Y+ M+ + ++ V M E G + Y ++++ L A
Sbjct: 119 IAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGAS 178
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYT 175
+ A+ +++E+ + C PTIV+Y + L +R EA D+ KEM+++G P+ TY+
Sbjct: 179 KFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYS 238
Query: 176 VLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+L++ L + K E AL++++++ G +PD NILI C G+T + M
Sbjct: 239 LLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHW 298
Query: 236 RLALRYPVFKEALQTF-KVADENDSL-LWQ--VHPQFSPEFISDN 276
A + ++ F K D ++L +W + P+ IS N
Sbjct: 299 NCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYN 343
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 154/396 (38%), Gaps = 32/396 (8%)
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
+G ++ A +++EM + P V Y A + F R+K D+++ M + G N +
Sbjct: 3 SGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREG-SRNVAS 61
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ +M L G+ +E I+ M+E+G D IL+ CK G + +L K
Sbjct: 62 FNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAK 121
Query: 234 ENRLAL---RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
+ AL Y L D+ S+L N +E + +
Sbjct: 122 QEGGALDAFAYSAMISGLCKMGKLDKAVSVL--------------NGMIE---SGCKPNT 164
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+ L+ LL + + + +T+I C R A +
Sbjct: 165 QVYNALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKE 224
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
++ N Y LI L + + ++ ++ G V + +LIH L S +
Sbjct: 225 MLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGK 284
Query: 411 PVPAAKIFSLLPEDQKCT---ATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A++++ + C TY L+ ++ G AL I+ + R G+ P + ++N
Sbjct: 285 TEHASELYFDM-NHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYN 343
Query: 468 VLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
+ L GL R+S A ++ DA++K+ VP
Sbjct: 344 ITLKGLCACNRISVAILFLN-------DAVTKNIVP 372
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+++ + +R + + + M EKG N +TY+ ++ L V+ A+ +W ++
Sbjct: 201 TYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMALQLWNQV 260
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K P + + + L + + A+++Y +M PN TY LME + G
Sbjct: 261 ISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDT 320
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
AL I++++ G+ PD + NI ++ C IL L
Sbjct: 321 RNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLN 363
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 1/157 (0%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E+ I++ + V++ M E I+ DAV Y ++++ AG + ++WE M +E +
Sbjct: 2 ESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMG-REGSRNVA 60
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
S+ M+ LF N V E +++ M + G + TY +L+ + G ++L +
Sbjct: 61 SFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIA 120
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
++ G D A + +I CK G+ + +L M E
Sbjct: 121 KQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIE 157
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 15/195 (7%)
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
W R + + ++ TM+ + + ++ELM+E G D+ TY ++H
Sbjct: 48 WELMGREGSRNVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKN 107
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G + ++++ E K + +Y+A + L ++ +A V MI+ G PN Y
Sbjct: 108 GYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVY 167
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ L+ A K+E+A+ +F ++ P N LI CK GE
Sbjct: 168 NALINGLLGASKFEDAIRVFKELGTRHCSPTIVTYNTLINGLCK-GE------------- 213
Query: 235 NRLALRYPVFKEALQ 249
R A Y + KE L+
Sbjct: 214 -RFAEAYDLVKEMLE 227
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D Y ML+ F +A RI + ++ELM +G + + ++ ++M L N G+VD +IW
Sbjct: 24 DAVVYNAMLNGFFKAGRIKNCFDLWELMGREG-SRNVASFNTMMRGLFNNGEVDEVFSIW 82
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E MK +Y + N ++ V + Q G + + Y+ ++ L +
Sbjct: 83 ELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAFAYSAMISGLCKM 142
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
GK ++A+ + + M E+G +P+ N LI A + I + +
Sbjct: 143 GKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFK 188
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/145 (17%), Positives = 63/145 (43%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G+N TY+ ++ + ++ ++ + KG D + ++H L + G +
Sbjct: 228 KGWNPSVITYSLLIKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEH 287
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++ +M C P +V+Y M+ + + A ++ +++ GL P+ +Y + ++
Sbjct: 288 ASELYFDMNHWNCAPNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLK 347
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQP 204
L + A+ + + P
Sbjct: 348 GLCACNRISVAILFLNDAVTKNIVP 372
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 189/490 (38%), Gaps = 64/490 (13%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
++NL +D V VL E A FF WV RS F H+R T+ +++I G A +++
Sbjct: 3 IRNLVPSFDHELVYNVLHGAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 63 HARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALF 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K++ R + + +M+ G+ P +T+ VL+ +GK E A F ++ +
Sbjct: 123 KVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREIT 182
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD N +I + + MKE ++ + ++ + D D L
Sbjct: 183 PDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRL 242
Query: 264 VHPQ----FSPEFIS-------------DNDAVEFVTTDIEGPLSIDQGLVLILL----- 301
V P I+ ++A + ++ ++ + I L
Sbjct: 243 VEEMKGLGIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAPKDNSIFIRLISSQC 302
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD------ 355
K NL A +L ++ SI ++ +IE C + D A+ F+ ++ D
Sbjct: 303 KAGNLDAAADVLKAMIRLSIPTEAGHYGVLIENYCKAGKYDQAVKLFDKLIEKDIILRPQ 362
Query: 356 --LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVP 413
L++E +AY LI L K +V ++ K LGV
Sbjct: 363 STLHMEPSAYNPLIEYLCNNGQTGKAETLVRQLMK----LGV------------------ 400
Query: 414 AAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ + + LI + GS D A +I K M R+ + ++ L+
Sbjct: 401 ------------QDSISLNTLIRGHSQEGSPDSAFEILKIMLRRKVDSEKSAYDSLVQSY 448
Query: 474 EKLGRVSDAE 483
K +DA+
Sbjct: 449 LKRNEPADAK 458
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 146/341 (42%), Gaps = 9/341 (2%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+FN + + G R T+ ++ F + ++ + FE ++ + I D VTY ++++
Sbjct: 137 YFNKMV-NEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDLKSREITPDVVTYNTMINGY 195
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+ ++ A + EMK K+ PT+V+YT +K DRV +A + +EM G+ PN
Sbjct: 196 TRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYASIDRVDDALRLVEEMKGLGIKPNA 255
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI-LIEKCCKAGETRTIILILR 230
TY+ L+ L A K EA + +M + + P + I LI CKAG +L+
Sbjct: 256 ITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAPKDNSIFIRLISSQCKAGNLDAAADVLK 315
Query: 231 YMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
M + + ++ + A + D + + I + + PL
Sbjct: 316 AMIRLSIPTEAGHYGVLIENYCKAGKYDQAVKLFDKLIEKDIILRPQSTLHMEPSAYNPL 375
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
+ L ++L+ +M +Q DS ++T+I + D A +
Sbjct: 376 ------IEYLCNNGQTGKAETLVRQLMKLGVQ-DSISLNTLIRGHSQEGSPDSAFEILKI 428
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 429 MLRRKVDSEKSAYDSLVQSYLKRNEPADAKAALDXMIENDH 469
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + L+I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G + + + M +GI P+ TFNVL+ G G
Sbjct: 105 KMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDLKS 178
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/430 (19%), Positives = 179/430 (41%), Gaps = 28/430 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D T+ +L + ++ S FELM+ + D T+ +++ LS G A
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 121 VNIWEEMKLK--ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
++++ M+ K EC P +V++T+ M + + ++ V++ M+ GL PN +Y LM
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KCCKAGETRTIILILRYMKEN 235
G AL + +++ G+ PD + L+ + + G+ + + L++R +
Sbjct: 363 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK 422
Query: 236 RLALRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFISDNDAVEFVTTDIEGPLSIDQ 294
+ Y +A + E + Q+ P +S V T
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS-------VCT---------- 465
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L+ + K V +D++LS + I L++A ++ I + + A+ ++ K
Sbjct: 466 -LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 524
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + + LI +++ +P+ ++EM L + + ++ + A
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Query: 415 AKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
IF+ + + C YT+++ Y ++ KA +++ M GI P + L+
Sbjct: 585 ESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR 643
Query: 472 GLEKLGRVSD 481
K G+ S+
Sbjct: 644 AFNKGGQPSN 653
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 176/444 (39%), Gaps = 26/444 (5%)
Query: 53 FNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLS 112
F W+ + + Y M+ + + + +F MQ+ DA TY ++++
Sbjct: 130 FKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHG 189
Query: 113 NAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCY 172
AG A+N+ ++M P+ +Y + + +EA +V K+M G+ P+
Sbjct: 190 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 249
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T+ +++ +Y +AL F M+ A V+PD NI+I K G++ + + M
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Query: 233 KENRLALRYPV--FKEALQTFKVAD--ENDSLLWQ--VHPQFSPEFISDNDAVEFVTTDI 286
+E R R V F + + V EN +++ V P +S N +
Sbjct: 310 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN--------AL 361
Query: 287 EGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL 346
G ++ G+ L S+L I I D + ++ R+ A
Sbjct: 362 MGAYAV-HGMSGTAL---------SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 347 AFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG 406
F K Y ALI + EI +M + G V L+
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 407 SARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLG 464
+++ V + S TA Y + IG Y +A +KA+ +Y++M +K +
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 465 TFNVLLAGLEKLGRVSDAEIYRKE 488
TF +L++G ++ + +A Y KE
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKE 555
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 117/248 (47%), Gaps = 4/248 (1%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRG-FNHDRFT 68
+YS S +L+K ++ D+ T N ++ + +A FN + R D T
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+T+++ ++ I + + VFE M +G+ + V+Y ++M + G A+++ ++K
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYE 188
P +VSYT + + + +A +V+ M + PN TY L++ G
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 189 EALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEAL 248
EA+EIF +M++ G++P+ + L+ C ++ + + +L + + L + A+
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Query: 249 QTFKVADE 256
++ A E
Sbjct: 503 GSYINAAE 510
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 158/372 (42%), Gaps = 23/372 (6%)
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVS-YTAYMKILFLNDRVKEATDVYKEMIQRGLPP 169
LS G ++ VN+++ MK+++ Y Y +++ ++ V +A ++ EM + P
Sbjct: 117 LSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKP 176
Query: 170 NCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ TY L+ RAG++ A+ + M A + P ++ N LI C +G R + +
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 230 RYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGP 289
+ M +N + L +K + L E + P
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL---------------SYFELMKGAKVRP 281
Query: 290 LSIDQGLVLILLKK--KNLVAIDSLLSGIMDKSIQL--DSAVISTIIEVNCDHRRRDGAL 345
+ +++ L K ++ A+D L + + +K + D ++I+ + +
Sbjct: 282 DTTTFNIIIYCLSKLGQSSQALD-LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 340
Query: 346 LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRL 405
FE V L +Y AL+G ++ ++ + G V L++
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 406 GSARRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSL 463
G +R+P A ++F ++ ++++ TY ALI Y S G +A++I++ M + GI P++
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Query: 464 GTFNVLLAGLEK 475
+ LLA +
Sbjct: 461 VSVCTLLAACSR 472
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 57 SRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGD 116
++SRG N + Y + + + A + +++ M++K + D+VT+T ++
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 117 VDGAVNIWEEMK------LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
A++ +EM+ KE Y +++ AY K +V EA ++ +M G P+
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVL--CAYSK----QGQVTEAESIFNQMKMAGCEPD 599
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILR 230
YT ++ + K+ +A E+F +M+ G++PD AC+ L+ K G+ + +++
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
Query: 231 YMKENRLALRYPVFKEALQTFKVADE 256
M+E + VF E E
Sbjct: 660 LMREKEIPFTGAVFFEIFSACNTLQE 685
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D +YT +L+ +G +++ K VF +M+++ + VTY +++ + G +
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV I+ +M+ P +VS + + + V RG+ N Y
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ + A + E+A+ ++ M++ V+ D ILI C+ + I L+ M++ +
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 238 ALRYPVFKEALQTF 251
L V+ L +
Sbjct: 562 PLTKEVYSSVLCAY 575
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D + ++ F + + S++ + +LM+EK I + + + +
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 119 GAVNIWEEMKLKECYPTI-VSYTAYMKILF-LNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
A+++ + M P++ + T M LF + +V+ ++ ++I G+ N TY +
Sbjct: 688 RAIDLIQMMD--PYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 745
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L+E+L+ G + + +E+ M AG+QP
Sbjct: 746 LLEHLLAVGNWRKYIEVLEWMSGAGIQPS 774
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 2/173 (1%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D YT+ML + +++ +F M+ GI D++ +++M + G
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ + M+ KE T + K A D+ +M+ LP T M +
Sbjct: 655 FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLI-QMMDPYLPSLSIGLTNQMLH 713
Query: 181 LV-RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L ++GK E +++F K+ +GV + IL+E G R I +L +M
Sbjct: 714 LFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWM 766
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 168/430 (39%), Gaps = 33/430 (7%)
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
+ ++ V++ M++ G++ + TY ++ L V A + +EM K C P V+Y
Sbjct: 140 VGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYAT 199
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
+ +L DR+ EAT+V M PP +Y ++ L R + +E + S M G
Sbjct: 200 IVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF----KVADEN 257
+QP+ +++ CKAGE R IL M F ++ +V D
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314
Query: 258 DSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
D W V ++P +S N L+ L +L S+L+ +
Sbjct: 315 DMWRWMVAEGWAPSTVSYNI------------------LIRGLCSVGDLKGASSILNSME 356
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+ ST+I+ GA+ + + Y ++ + K F
Sbjct: 357 QHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFN 416
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTAL 434
+ ++++M LI L RR A +F + C TY L
Sbjct: 417 QAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM-RRHGCVPNGRTYNEL 475
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK--KSI 492
I F G+ AL + M GI SL T+N +++GL + +A ++ + + I
Sbjct: 476 IHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGI 535
Query: 493 QADALSKDAV 502
Q +A + A+
Sbjct: 536 QPNAFTFSAI 545
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 169/467 (36%), Gaps = 60/467 (12%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R G + + FTY ++ + R+ + + + + M KG D VTY +++ L +
Sbjct: 151 RKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRL 210
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A + M P SY A + L R++E V +M+ RGL PN TYT +
Sbjct: 211 DEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTI 265
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPD-------------------------------- 205
++ +AG+ A I ++M G P+
Sbjct: 266 VDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGW 325
Query: 206 ---KAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADENDSL- 260
+ NILI C G+ + IL M+++ + + F K D ++
Sbjct: 326 APSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAIS 385
Query: 261 LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKS 320
+W + + + + + +V + KK SL+ ++ ++
Sbjct: 386 IWN----------------DMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
++ +T+I CD RR AL F + Y LI L +
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 489
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS--LLPEDQKCTATYTALIGVY 438
+V EM G L + ++ L R A ++ Q T++A+I Y
Sbjct: 490 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 549
Query: 439 FSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
G A + M H ++ + +L+A L ++ DA Y
Sbjct: 550 CKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTY 596
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 5/235 (2%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+N +SRS G + YT M+D+F + + K + + M + + VT+ +++ L
Sbjct: 386 IWNDMSRS-GCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 444
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+ V A+ ++ EM+ C P +Y + LF +A + EM G+ +
Sbjct: 445 CDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSL 504
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRY 231
TY ++ L + EA+ KM G+QP+ + +I CK GE R +L
Sbjct: 505 VTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGA 564
Query: 232 MKE---NRLALRYPVF-KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
M +R L Y + E K+ D LL ++ P ++ N V V
Sbjct: 565 MNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEKGINIDAVTYTSVMHWLSNAGD 116
+S G TY T++ + R+S VF M +GI +A T+++++H G+
Sbjct: 496 QSHGIELSLVTYNTVVSGLCQT-RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 554
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
V A + M + C+ I+ YT M L D++ +A +M+ G+ PN T+ V
Sbjct: 555 VRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 614
Query: 177 LMEYLVR 183
L+ + R
Sbjct: 615 LVRGVFR 621
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 45 PMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
P+ + FFNW S GF+ + M+D G+ + +V +LM+ + + I T+
Sbjct: 126 PVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETF 185
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATD------- 157
+ +M AG A++ + M+ C P ++++ + IL R EA +
Sbjct: 186 SILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKD 245
Query: 158 ---------------------------VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
V+ EM G+ PN YTY+++++ L R G+ A
Sbjct: 246 KFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRA 305
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
++F++M +AG QP+ N L+ KAG T ++ + MK
Sbjct: 306 HDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMK 348
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D+ ++ ++ I +R S + F+ +++K D + YT+++ AG++ A ++
Sbjct: 216 DKIAFSILISILCRKRRASEAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVF 274
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
EMK+ P + +Y+ + L ++ A DV+ EM+ G PN TY LM V+A
Sbjct: 275 GEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKA 334
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G+ E+ L+++++M+ G +PD N LIE CK
Sbjct: 335 GRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCK 368
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A FF+ S F D YT ++ + A IS + VF M+ GI + TY+ V
Sbjct: 235 EAQEFFD--SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIV 292
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ L G + A +++ EM C P ++Y + M+I R ++ VY +M + G
Sbjct: 293 IDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGC 352
Query: 168 PPNCYTYTVLME 179
P+ TY L+E
Sbjct: 353 EPDTVTYNFLIE 364
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Query: 318 DKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
D + + D S +I + C RR A F+ S+K + Y L+ +
Sbjct: 210 DYNCKPDKIAFSILISILCRKRRASEAQEFFD-SLKDKFEPDVIVYTNLVRGWCRAGNIS 268
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
+ + EM AG VY +++I L + A +F+ + + Q + TY +L+
Sbjct: 269 EAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLM 328
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLL 470
++ AG +K L++Y M R G P T+N L+
Sbjct: 329 RIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLI 363
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 178/459 (38%), Gaps = 23/459 (5%)
Query: 32 DSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D+ T N +L H + +A + R G + TY T++ F I V
Sbjct: 242 DAVTYNTLLNAHCRKGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKV 300
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILF 147
E M G D TY + L AG VD A + +EM +L P +V+Y + F
Sbjct: 301 VESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACF 360
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+A + +EM +G+ P T+ ++++ L + GK EEAL K+ E G+ PD
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
N LI+ CKAG ++ M L + TF + +L +
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGL---------KMDTFTLNTVLYNLCKMKRYE 471
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL-LKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ E + FV P + G V+ K+ N L ++++ + +
Sbjct: 472 DAEELLHSPPQRGFV------PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+T+I+ C R A+ V+ L + T Y +I K +M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSA 444
+ V L++ L + A K+F E K TY LI G
Sbjct: 586 VENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDV 645
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
D AL + M KG+ P T+NV+L+ L + GR +A
Sbjct: 646 DTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 141/336 (41%), Gaps = 28/336 (8%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVL----KTHPPMEKAWLFFNWVSRSR 60
+Y + K ++ A++LL + P + D + V+ K + P L+ + R
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK- 519
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
TY T++ +R+ EKG+ D TY ++H GD++ A
Sbjct: 520 -LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+M P +V+ M L L+ ++ +A +++ +++G + TY L++
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQS 638
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN-RLAL 239
+ + G + AL F M+ G+QPD N+++ +AG + +L + ++ +L+
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQ 698
Query: 240 RY--PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ P+ K + ADE D + P+ + ++A+E + G
Sbjct: 699 SFACPLLKPS-----SADEADVKEHEGKPEAESSEKAQDNALETYMERLNG--------- 744
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
L L ++L +M K + +D + T++E
Sbjct: 745 --LCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLME 778
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 166/431 (38%), Gaps = 35/431 (8%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
NH +T+ ++ ++ MQ G++ DAVTY ++++ G + A
Sbjct: 207 NH--YTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARA 264
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ MK PT +Y + +K+AT V + M G P+ TY VL L
Sbjct: 265 LLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLC 324
Query: 183 RAGKYEEALEIFSKMQEAGVQ-PDKAACNILIEKCCKAGETRTIILILRYMKEN----RL 237
+AGK +EA + +M+ G PD N L++ C K + + +L M++ L
Sbjct: 325 QAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
V K + K+ + L +P+ I+ N L+
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNT------------------LI 426
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K N+ +L+ ++ K +++D+ ++T++ C +R + A +
Sbjct: 427 DAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMT--KAGHSLGVY----LGALLIHRLGSARRP 411
+ +Y ++ K + ++M K S+ Y G + RL A
Sbjct: 487 PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK 546
Query: 412 VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
+ L+P++ TY +I Y G + A + + M P + T N L+
Sbjct: 547 LNEFVEKGLVPDE----TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602
Query: 472 GLEKLGRVSDA 482
GL G++ A
Sbjct: 603 GLCLHGKLDKA 613
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 140/351 (39%), Gaps = 26/351 (7%)
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
DV++ +I+ L PN YT+ +L+ G +AL S MQ G+ PD N L+
Sbjct: 194 DVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH 253
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFK----VADENDSLLWQVHPQFSPEF 272
C+ G +L MK + +A P + + F + + F P+
Sbjct: 254 CRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDL 313
Query: 273 ISDN-------------------DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
+ N D +E + T + ++ + LV K + LL
Sbjct: 314 RTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNT-LVDACFKWRCSSDALRLL 372
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
+ DK ++ + +++ C + + AL E + L + Y LI K
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATY 431
K +++EM G + + +++ L +R A ++ P+ +Y
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ YF + + AL+++ M + + PS+ T+N L+ GL ++ R+ +A
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 42/200 (21%)
Query: 29 IKWDSYTVNQVLKT---HPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
K D T N ++ H ++KA LF +WV + + D TY T++ + + +
Sbjct: 590 FKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV--DVITYNTLIQSMCKVGDVDT 647
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM----KLKECY------P 134
+ F+ M+ KG+ DA TY V+ LS AG + A N+ ++ KL + + P
Sbjct: 648 ALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKP 707
Query: 135 T--------------------------IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ + +Y + L ++KEA V EM+Q+G+P
Sbjct: 708 SSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMP 767
Query: 169 PNCYTYTVLMEYLVRAGKYE 188
+C TY LME L++ K +
Sbjct: 768 VDCSTYITLMEGLIKRQKRQ 787
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/381 (18%), Positives = 152/381 (39%), Gaps = 14/381 (3%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY T++D + + S + E M++KG+ VT+ V+ L G ++ A+
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E++ + P +++Y + V +A + EM+ +GL + +T ++ L +
Sbjct: 408 EKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKM 467
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+YE+A E+ + G PD+ + ++ K + + M E +L +
Sbjct: 468 KRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTY 527
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKK 304
++ + + +++ EF+ + T +I ++ K+
Sbjct: 528 NTLIKGLCRMERLKEAIDKLN-----EFVEKGLVPDETTYNI---------IIHAYCKEG 573
Query: 305 NLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYL 364
+L + +++ S + D +T++ C H + D AL FE V+ ++ Y
Sbjct: 574 DLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYN 633
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
LI + K+ ++M G + +++ L A R A + L +
Sbjct: 634 TLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADS 693
Query: 425 QKCTATYTALIGVYFSAGSAD 445
K + ++ + SA AD
Sbjct: 694 GKLSQSFACPLLKPSSADEAD 714
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 32 DSYTVNQVLKTH---PPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D T N ++ H + KA+ + + R RG D FT T+L + KR + +
Sbjct: 414 DVITYNTLIHAHCKAGNIAKAYTLMDEMVR-RGLKLDTFTLNTVLYNLCKEKRYEEAQGL 472
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFL 148
+ ++G D V+Y +VM + + A+ +W+EM K+ P+I +Y +K L
Sbjct: 473 LQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSR 532
Query: 149 NDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA 208
R+KEA D E++++GL P+ TY +++ + G E A + +KM E +PD
Sbjct: 533 MGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVT 592
Query: 209 CNILIEKCCKAGE 221
CN L+ C G+
Sbjct: 593 CNTLMNGLCLNGK 605
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 181/491 (36%), Gaps = 71/491 (14%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSR----GFNHDRFTYTTMLDIFGEA 79
++ + D+ T N +L H K L +R G R TY T++ +
Sbjct: 230 MQGFGLSPDAVTYNTLLNAH--CRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARL 287
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVS 138
I V E M G D TY + L AG VD A + +EM +L P +V+
Sbjct: 288 GWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVT 347
Query: 139 YTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQ 198
Y F +A + +EM ++G+ T+ ++++ L + G+ E AL +KM
Sbjct: 348 YNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMA 407
Query: 199 EAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF---KVAD 255
+ G+ PD N LI CKAG ++ M L L L K +
Sbjct: 408 DDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYE 467
Query: 256 ENDSLLWQVHPQ--FSPEFISDNDAV-----------------EFVTTDIEGPLSIDQGL 296
E LL Q PQ F P+ +S + E + + +S L
Sbjct: 468 EAQGLL-QSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTL 526
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALL-AFEYSVKMD 355
+ L + L L+ +M+K + D + II C ++G L AF++ KM
Sbjct: 527 IKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC----KEGDLENAFQFHNKMV 582
Query: 356 LNLERTAYL---ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPV 412
N + + L+ L K ++ E + G + V
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVI---------------- 626
Query: 413 PAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
TY LI G D AL + M +G+ P T+NV+L+
Sbjct: 627 -----------------TYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 669
Query: 473 LEKLGRVSDAE 483
L + GR +A+
Sbjct: 670 LSEAGRTEEAQ 680
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 176/430 (40%), Gaps = 33/430 (7%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
NH +T+ ++ ++ MQ G++ DAVTY ++++ G + A
Sbjct: 203 NH--YTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARA 260
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ MK PT +Y + +K+AT V + M G P+ +TY VL L
Sbjct: 261 LLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLC 320
Query: 183 RAGKYEEALEIFSKMQEAG-VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+AGK +EA + +M+ G + PD N L + C K + + +L M+E +
Sbjct: 321 QAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATL 380
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
++ E + L ++ + D A + +T + L+
Sbjct: 381 VTHNIVIKGLCKDGELEGALGCLN-----KMADDGLAPDVITYNT---------LIHAHC 426
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
K N+ +L+ ++ + ++LD+ ++T++ C +R + A + + +
Sbjct: 427 KAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEV 486
Query: 362 AYLALIGILIK-LNTFPKVA---EIVEEMTKAGHSLGVYLGALL--IHRLGSARRPVPAA 415
+Y ++ K N+ P + E++E+ K S+ Y L+ + R+G + +
Sbjct: 487 SYGTVMAAYFKEYNSEPALRLWDEMIEK--KLTPSISTY-NTLIKGLSRMGRLKEAIDKL 543
Query: 416 KIF---SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
L+P+D TY +I Y G + A + + M P + T N L+ G
Sbjct: 544 NELMEKGLVPDD----TTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNG 599
Query: 473 LEKLGRVSDA 482
L G++ A
Sbjct: 600 LCLNGKLDKA 609
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Query: 68 TYTTMLDIFGEAKRI-SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY T++ R+ ++ + ELM EKG+ D TY ++H GD++ A +
Sbjct: 522 TYNTLIKGLSRMGRLKEAIDKLNELM-EKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNK 580
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
M P +V+ M L LN ++ +A +++ +++G + TY L++ + + G
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGD 640
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
+ AL F+ M+ G+QPD N+++ +AG T +L + E+
Sbjct: 641 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAES 689
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 138/351 (39%), Gaps = 26/351 (7%)
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
D ++ ++ L PN YT+ +L+ G +AL S MQ G+ PD N L+
Sbjct: 190 DAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAH 249
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFK----VADENDSLLWQVHPQFSPEF 272
C+ G +L MK++ +A P + + + + + F P+
Sbjct: 250 CRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDL 309
Query: 273 ISDN-------------------DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
+ N D +E + T + ++ + L K + LL
Sbjct: 310 WTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNT-LADACFKCRCSSDALRLL 368
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
+ +K ++ + +I+ C +GAL L + Y LI K
Sbjct: 369 EEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKA 428
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATY 431
K +++EM + G L + +++ L +R A + P+ +Y
Sbjct: 429 GNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSY 488
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ YF +++ AL+++ M K + PS+ T+N L+ GL ++GR+ +A
Sbjct: 489 GTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEA 539
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/435 (19%), Positives = 171/435 (39%), Gaps = 25/435 (5%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY T+ D + + S + E M+EKG+ VT+ V+ L G+++GA+
Sbjct: 344 DVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCL 403
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+M P +++Y + + +A + EM++RGL + +T ++ L +
Sbjct: 404 NKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKE 463
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+YEEA + + G PD+ + ++ K + + + M E +L +
Sbjct: 464 KRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTY 523
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV------TTDIEGPLSIDQGLVL 298
++ + +++ + D+ + D+E +V
Sbjct: 524 NTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVE 583
Query: 299 ILLKKKNLVAIDSLLSGI-----MDKSIQL-----------DSAVISTIIEVNCDHRRRD 342
K ++V ++L++G+ +DK+++L D +T+I+ C D
Sbjct: 584 NSF-KPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642
Query: 343 GALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLI 402
AL F L + Y ++ L + + ++ ++ ++G + LL
Sbjct: 643 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLK 702
Query: 403 HRLGSARRPVPAAKIFSLLPEDQKCTAT--YTALIGVYFSAGSADKALKIYKTMCRKGIH 460
AK E+ + +A+ YT L+ ++G +A I M +KG+
Sbjct: 703 PSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMS 762
Query: 461 PSLGTFNVLLAGLEK 475
T+ L+ GL K
Sbjct: 763 VDSSTYITLMEGLVK 777
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY ++ + + + + M E D VT ++M+ L G +D
Sbjct: 549 KGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDK 608
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++E K +++Y ++ + + V A + +M RGL P+ +TY V++
Sbjct: 609 ALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLS 668
Query: 180 YLVRAGKYEEALEIFSKMQEAGV 202
L AG+ EEA + K+ E+G
Sbjct: 669 ALSEAGRTEEAQNMLHKLAESGT 691
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 37/171 (21%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
LF +WV + + D TY T++ + + + + F M+ +G+ DA TY V+
Sbjct: 612 LFESWVEKGKKV--DVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 669
Query: 111 LSNAGDVDGAVNIWEEMK----LKECY------PTIV----------------------- 137
LS AG + A N+ ++ L + + P+ V
Sbjct: 670 LSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSA 729
Query: 138 --SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
+YT + L + + KEA + EM+Q+G+ + TY LME LV+ K
Sbjct: 730 SEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G + +Y +L F + K++ E+M +G D VTY +++ L G VD
Sbjct: 149 THGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVD 208
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV + ++ K C P +++Y + L + +A ++ EM +GL P+ TY+ L+
Sbjct: 209 AAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLI 268
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L R GK EEA++ F ++ GV+P+ N ++ CKA +T I L YM
Sbjct: 269 AGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYM 322
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 7/201 (3%)
Query: 20 AQDLLKNLPIKW---DSYTVNQVLK---THPPMEKAWLFFNWVSRSRGFNHDRFTYTTML 73
A D+L+ +P +S + N +L M++A + + SRG D TY TML
Sbjct: 140 AIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE-IMVSRGCYPDIVTYNTML 198
Query: 74 DIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECY 133
+ ++ + + + KG + +TY +V+ LS G D AV + EM+ K
Sbjct: 199 TALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLK 258
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P +++Y++ + L +V+EA + ++ G+ PN +TY +M L +A + + A++
Sbjct: 259 PDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDF 318
Query: 194 FSKMQEAGVQPDKAACNILIE 214
+ M G +P + + ILIE
Sbjct: 319 LAYMISKGCKPTEVSYTILIE 339
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 133/355 (37%), Gaps = 86/355 (24%)
Query: 130 KECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEE 189
KECYP +++YT ++ V +A + EM RG P+ TY VL+ + + G+ +E
Sbjct: 10 KECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDE 69
Query: 190 ALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQ 249
A++ + M G QP+ NI++ C G R+M +L
Sbjct: 70 AIKFLNSMPSYGSQPNVITHNIILRSMCSTG---------RWMDAEKL------------ 108
Query: 250 TFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV-- 307
L V SP ++ N + F L +K L+
Sbjct: 109 ----------LTEMVRKGCSPSVVTFNILINF-------------------LCRKGLLGR 139
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
AID +L + +S + ++ C ++ D A+ E V + Y ++
Sbjct: 140 AID-ILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTML 198
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC 427
L K E++ +++ G S PV
Sbjct: 199 TALCKDGKVDAAVELLNQLSSKGCS------------------PV--------------- 225
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY +I G D+A+++ M KG+ P + T++ L+AGL + G+V +A
Sbjct: 226 LITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEA 280
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 71/154 (46%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TYT +++ + + + M +G D VTY +++ + G +D A+
Sbjct: 15 DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M P ++++ ++ + R +A + EM+++G P+ T+ +L+ +L R
Sbjct: 75 NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G A++I KM G P+ + N L+ CK
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCK 168
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + T+ +++ + + E M G ++++Y ++H +D
Sbjct: 115 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDR 174
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ E M + CYP IV+Y + L + +V A ++ ++ +G P TY +++
Sbjct: 175 AIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVID 234
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPD 205
L + GK ++A+E+ +M+ G++PD
Sbjct: 235 GLSKVGKTDQAVELLHEMRGKGLKPD 260
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
++ A N +S S+G + TY T++D + + + M+ KG+ D +TY+
Sbjct: 207 VDAAVELLNQLS-SKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYS 265
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ LS G V+ A+ + +++ P +Y + M L + A D MI +
Sbjct: 266 SLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISK 325
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILI 213
G P +YT+L+E + G +EALE+ +++ GV +A +++
Sbjct: 326 GCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 1/188 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+++A F N + S G + T+ +L R + + M KG + VT+
Sbjct: 67 LDEAIKFLNSMP-SYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFN 125
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++++L G + A++I E+M C P +SY + ++ A + M+ R
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ TY ++ L + GK + A+E+ +++ G P N +I+ K G+T
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245
Query: 226 ILILRYMK 233
+ +L M+
Sbjct: 246 VELLHEMR 253
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 88/220 (40%), Gaps = 4/220 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG D TY +++ + R+ M G + +T+ ++ + + G
Sbjct: 44 SRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWM 103
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EM K C P++V++ + L + A D+ ++M G PN +Y L+
Sbjct: 104 DAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLL 163
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ K + A++ M G PD N ++ CK G+ + +L + +
Sbjct: 164 HGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCS 223
Query: 239 ---LRYPVFKEALQTFKVADENDSLLWQVHPQ-FSPEFIS 274
+ Y + L D+ LL ++ + P+ I+
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVIT 263
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
V + EK D +TYT ++ V A+ + +EM + C P +V+Y + +
Sbjct: 3 VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
R+ EA M G PN T+ +++ + G++ +A ++ ++M G P
Sbjct: 63 KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122
Query: 208 ACNILIEKCCKAGETRTIILILRYM 232
NILI C+ G I IL M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKM 147
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + FT+ ++D FG+ + S ++E M G D VT+TS++ G+V+
Sbjct: 313 SSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVN 372
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ +WEEMK++ P + +Y + L +R++EA + + + + P + Y ++
Sbjct: 373 QGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVI 432
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ +AGK +EA I ++MQE +PDK ILI C G
Sbjct: 433 DGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
VN++ K H +++ L +G + D TYT+++ + + + + +F+ M
Sbjct: 262 VNEISKGHDLLKEDMLI-------KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
GI + T+ ++ G++ A+ ++E+M L C P +V++T+ + V +
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+++EM R L PN YTY VL+ L + + EA ++ + V P N +I+
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 434
Query: 216 CCKAGETRTIILILRYMKENR 236
CKAG+ I+ M+E +
Sbjct: 435 FCKAGKVDEANFIVAEMQEKK 455
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 165/436 (37%), Gaps = 56/436 (12%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FF + NH TY ++ + S K VF+ M+ GI D+ ++
Sbjct: 95 FFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSY 154
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVS---YTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ G +D A N E+ CY VS Y + +L + V EA +++E ++
Sbjct: 155 ARMGKLDSAKNFLNEV---HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ Y++ +L+ L R G+ ++A E F M G PD + N LI C+
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRV--------- 262
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
N ++ + + KE D L+ V P D + + T+ I G
Sbjct: 263 ------NEISKGHDLLKE-----------DMLIKGVSP----------DVITY-TSIISG 294
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
K ++ A L ++ I+ + + +I+ A++ +
Sbjct: 295 -----------YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
E + + + + +LI + + ++ EEM S VY A+LI+ L
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Query: 409 RRPVPAAKIFSLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
R A L + Y +I + AG D+A I M K P TF
Sbjct: 404 NRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITF 463
Query: 467 NVLLAGLEKLGRVSDA 482
+L+ G GR+ +A
Sbjct: 464 TILIIGNCMKGRMVEA 479
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 13/238 (5%)
Query: 7 NVYKIL-----KYSTWDSAQ---DLLKNLPIKWDSYTVNQVLKTHPPMEK---AWLFFNW 55
N Y +L K DSA+ D +++ I DS + ++ ++ M K A F N
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V G F Y +L++ + + +F E D ++ ++ L G
Sbjct: 170 V-HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG 228
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE-MIQRGLPPNCYTY 174
++D A ++ M C+P IVSY + + + + D+ KE M+ +G+ P+ TY
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T ++ + G + A E+F +M +G++P+ N+LI+ K G R+ +++ M
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEKGINIDAVTY 104
++KA+ FF + F D +Y T+++ F IS + E M KG++ D +TY
Sbjct: 230 IDKAFEFFQNMGNFGCF-PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
TS++ GD+ A +++EM P ++ + ++ A +Y++M+
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
G P+ T+T L++ R G+ + L+++ +M+ + P+ +LI CK R
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADEND 258
LR++K + + + ++ + F A + D
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVD 442
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ R + + +TY +++ + RI + ++ + Y V+ AG V
Sbjct: 382 KVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKV 441
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A I EM+ K+C P +++T + + R+ EA + +MI+ P+ T L
Sbjct: 442 DEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSL 501
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQ 203
+ L++AG EA S++++A +Q
Sbjct: 502 ISCLLKAGMPNEA----SQIKQAALQ 523
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 127/325 (39%), Gaps = 23/325 (7%)
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY +LM L + G + A +F M+ G+ PD + +L+ + G+ + L +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ + V+ L + D + P F+ D + + + I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
D+ N ++S + +I+ VN + D LL + +
Sbjct: 231 DKAFEF-FQNMGNFGCFPDIVSY---------NTLINGFCRVNEISKGHD--LLKEDMLI 278
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG------ 406
K ++ + Y ++I KL +E+ +EM +G + +LI G
Sbjct: 279 K-GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMR 337
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
SA + LP+ T+T+LI Y G ++ LK+++ M + + P++ T+
Sbjct: 338 SAMVMYEKMLLLGCLPD----VVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTY 393
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKS 491
VL+ L K R+ +A + + KS
Sbjct: 394 AVLINALCKENRIREARNFLRHLKS 418
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY+T+++ + R+ +FE M K I DA+TY ++++ + VD A+ I E
Sbjct: 238 TYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEF 297
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK C P + +Y+A M R++EA +V+ EM GL P+ YT L+ + RAG+
Sbjct: 298 MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGR 357
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG---ETRTIILILRY 231
+EA+E+ M+E + D N+++ C+ G E R ++ L Y
Sbjct: 358 VDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPY 405
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 4/211 (1%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY +++ F +++ + E M++ G N + Y+++M+ G ++ A ++
Sbjct: 271 DALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVF 330
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
+EMK P V YT + RV EA ++ K+M + + T+ V++ L R
Sbjct: 331 DEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCRE 390
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
G++EEA + ++ GV +KA+ I++ C+ GE + ++ M + +
Sbjct: 391 GRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATS 450
Query: 245 KEAL----QTFKVADENDSLLWQVHPQFSPE 271
E L + KV D +LL + F PE
Sbjct: 451 NELLVHLCEAGKVGDAVMALLGLLELGFKPE 481
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 89/172 (51%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G N + F Y+ +++ F + R+ K VF+ M+ G+ D V YT+++++ AG V
Sbjct: 299 KKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRV 358
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ + ++M+ +C V++ + L R +EA + + + G+ N +Y ++
Sbjct: 359 DEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIV 418
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL 229
+ L R G+ ++A ++ M GV P A N L+ C+AG+ ++ L
Sbjct: 419 LNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMAL 470
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
Query: 82 ISSMKYVFELMQEKGINI-DAVTYTSVMHWLSNAGDVDGAVNIWEEMKLK-ECYPTIVSY 139
I S V E M++ ++ + +TY+++++ L +G + A+ ++EEM K + P ++Y
Sbjct: 216 IDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTY 275
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
A + ++V A + + M + G PN + Y+ LM + G+ EEA E+F +M+
Sbjct: 276 NALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKS 335
Query: 200 AGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
G++PD LI C+AG + +L+ M+EN+
Sbjct: 336 LGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENK 372
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F+ + +S G D YTT+++ F A R+ + + M+E D VT+
Sbjct: 323 LEEAKEVFDEM-KSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFN 381
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
++ L G + A + E + + Y SY + L +++AT + M+ R
Sbjct: 382 VILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGR 441
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G+ P+ T L+ +L AGK +A+ + E G +P+ + +L+E C+
Sbjct: 442 GVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICR 494
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 84/447 (18%), Positives = 176/447 (39%), Gaps = 65/447 (14%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
++A FN V+ RGF+H+ TY T+L ++K+ ++ V M + + +
Sbjct: 74 QRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLN 133
Query: 107 VMHWLSNAGDVDGAVNIWEEMK--LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI- 163
+M S + V +++ ++ ++E P++ + + + +L +++V D+ ++ +
Sbjct: 134 LMKHFSKLSLHERVVEMFDAIRPIVRE-KPSLKAISTCLNLLVESNQV----DLTRKFLL 188
Query: 164 ----QRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ-PDKAACNILIEKCCK 218
L PN + +L+++ + G + A E+ +M+++ V P+ + LI C
Sbjct: 189 NSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCG 248
Query: 219 AGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDA 278
+G KEA++ F+ D +L P+ ++ N
Sbjct: 249 SGR----------------------LKEAIELFEEMVSKDQIL--------PDALTYNAL 278
Query: 279 VE-FVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCD 337
+ F + +D+ L ++ KKN + S ++ C
Sbjct: 279 INGFCHGE-----KVDRALKIMEFMKKN--------------GCNPNVFNYSALMNGFCK 319
Query: 338 HRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL 397
R + A F+ + L + Y LI + + E++++M +
Sbjct: 320 EGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVT 379
Query: 398 GALLIHRLGSARRPVPAAKIFSLLPEDQK--CTATYTALIGVYFSAGSADKALKIYKTMC 455
+++ L R A + LP + A+Y ++ G KA ++ M
Sbjct: 380 FNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLML 439
Query: 456 RKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+G+ P T N LL L + G+V DA
Sbjct: 440 GRGVLPHFATSNELLVHLCEAGKVGDA 466
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 143/360 (39%), Gaps = 36/360 (10%)
Query: 155 ATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEA-GVQPDKAACNILI 213
AT+ M++ P ++ + + R + ALEIF+++ E G + A ++
Sbjct: 41 ATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATIL 100
Query: 214 EKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-------KVADENDSLLWQVHP 266
K K+ + + I +L M +F ++ F +V + D++ V
Sbjct: 101 HKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVRE 160
Query: 267 QFSPEFISD--NDAVEFVTTDIEGPLSIDQGLVLILLKKK---NLVAIDSLLSGIMDKSI 321
+ S + IS N VE D+ ++ L L N++ +G +D +
Sbjct: 161 KPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAF 220
Query: 322 QL------------DSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL-ERTAYLALIG 368
++ + ST+I C R A+ FE V D L + Y ALI
Sbjct: 221 EVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALIN 280
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIH------RLGSARRPVPAAKIFSLLP 422
+ +I+E M K G + V+ + L++ RL A+ K L P
Sbjct: 281 GFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKP 340
Query: 423 EDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
+ T YT LI + AG D+A+++ K M TFNV+L GL + GR +A
Sbjct: 341 D----TVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEA 396
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 178/461 (38%), Gaps = 32/461 (6%)
Query: 25 KNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
+N P+ T++ LK A F W+ + Y M+ + ++
Sbjct: 118 RNFPLLIREITISGSLK------HAVHVFRWMKIQENYCARNDIYGMMIRLHARHNQVDQ 171
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
+ +F MQE D TY S++H + AG A+NI ++M+ P+ +Y +
Sbjct: 172 ARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVIN 231
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
K+A ++ K+M + G+ P+ T+ +++ +Y +A+ F M+ + V P
Sbjct: 232 ACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAP 291
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPV--FKEALQTFKVADENDSLL- 261
D NI+I K I + M+E R V + + ++ V + ++
Sbjct: 292 DTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKA 351
Query: 262 ---WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
V P +S N + + G+ L+ L+ + I+
Sbjct: 352 VFDMMVAEGVRPNIVSYNALLGAYAS---------HGMHTEALETFKLLKQNGFKPDIVS 402
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPK 378
+ L++ S + E A F K + +Y ALI +
Sbjct: 403 YTSLLNAYGRSALPE---------KAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKE 453
Query: 379 VAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIG 436
++ EM + G V + L+ G R+P I + Q T Y + IG
Sbjct: 454 AISLLHEMEQDGIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIG 513
Query: 437 VYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
Y S G KAL++Y +M + P T+N+L++G KLG
Sbjct: 514 SYLSLGDYKKALELYTSMRTGNVKPDAVTYNILISGSCKLG 554
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ GF D +YT++L+ +G + + VF M++ + V+Y +++ +AG +
Sbjct: 392 KQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGML 451
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDV---YKEMIQRGLPPNCYTY 174
A+++ EM+ P ++S + +L R ++ T + RG+ N Y
Sbjct: 452 KEAISLLHEMEQDGIQPDVISIST---LLTACGRCRQPTKIGIILAAAKSRGIQLNTVAY 508
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+ + G Y++ALE+++ M+ V+PD NILI CK G R
Sbjct: 509 NSGIGSYLSLGDYKKALELYTSMRTGNVKPDAVTYNILISGSCKLGSFR 557
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 200/494 (40%), Gaps = 76/494 (15%)
Query: 11 ILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKT----------------HPPMEKAWLFFN 54
I+ T++S L++ I WD Y +V T + A LFF
Sbjct: 211 IVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQ 270
Query: 55 WVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNA 114
+ + F ++ T++ + + + K F +M + G+ DA +Y ++H L A
Sbjct: 271 -DTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIA 329
Query: 115 GDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTY 174
G + A+++ +M+ P +V+Y K L + A ++ ++M+ +G PN TY
Sbjct: 330 GSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTY 389
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
TVL+ + G EEAL+++ +M G Q + +L+ CK+ + + M+
Sbjct: 390 TVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEA 449
Query: 235 NRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
N L P+ I+ + + + E + Q
Sbjct: 450 NGL-------------------------------RPDLITYSTLIHGLCKQGE----VQQ 474
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
++L N + +SL+ G I+ C+ + A + F+Y +
Sbjct: 475 AILLYEKMCSNRIIPNSLIHG--------------AILMGLCEKGKISQARMYFDYLITS 520
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV------YLGALLIHRLGSA 408
+L+L+ Y +I IK + ++ +++ + G S + G + +L A
Sbjct: 521 NLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQA 580
Query: 409 RRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNV 468
RR + K+ L P TYT L+ VY G+ L++ M K I P+ T+ V
Sbjct: 581 RRLLDTIKLHGLEPN----AVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV 636
Query: 469 LLAGLEKLGRVSDA 482
++ GL K ++ ++
Sbjct: 637 VIKGLCKQWKLQES 650
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 16/296 (5%)
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
E +IS + F+ + +++D + Y ++ G+ AV +++++ K PTIV
Sbjct: 503 EKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIV 562
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKM 197
++ + M +N ++ +A + + GL PN TYT LM G + LE+ S+M
Sbjct: 563 TFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEM 622
Query: 198 QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF-KVADE 256
+ + P ++I+ CK + + +L M L + +Q F K D
Sbjct: 623 KAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDM 682
Query: 257 NDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGI 316
+ Q + + N VT +I L+ +L D+LL +
Sbjct: 683 RKAF------QLYDKMLLHNLEPTSVTYNI---------LINGFCVYGDLKDADNLLVSL 727
Query: 317 MDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
++ + L+ +TII+ +C D A++ F V+ + Y A+IG L K
Sbjct: 728 QNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCK 783
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 86/164 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + T+ +++ F +++S + + + ++ G+ +AVTYT++M+ G++
Sbjct: 555 KGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQS 614
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + EMK K PT ++YT +K L +++E+ + ++M GL P+ +Y +++
Sbjct: 615 LLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQ 674
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+A +A +++ KM ++P NILI C G+ +
Sbjct: 675 AFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLK 718
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 166/425 (39%), Gaps = 47/425 (11%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G D TY + F I+ + + M KG N + VTYT ++ G+V+
Sbjct: 344 NHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVE 403
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ +++EM +I+S T + L + +V A ++ EM GL P+ TY+ L+
Sbjct: 404 EALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLI 463
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
L + G+ ++A+ ++ KM + P+ ++ C+ G+ + Y+ + L+
Sbjct: 464 HGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLS 523
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
L ++ + + + N +++ Q + IS VT + S+ G +
Sbjct: 524 LDIILYNIMIDGY-IKRGNTREAVKLYKQLGEKGISPT----IVTFN-----SLMYGFCI 573
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ L LL I ++ ++ +T++ V C+ L +
Sbjct: 574 ----NRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGP 629
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y +I L K + +++E+M G
Sbjct: 630 THITYTVVIKGLCKQWKLQESCQLLEDMDAVG---------------------------- 661
Query: 419 SLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGR 478
L DQ +Y +I + A KA ++Y M + P+ T+N+L+ G G
Sbjct: 662 --LTPDQ---VSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGD 716
Query: 479 VSDAE 483
+ DA+
Sbjct: 717 LKDAD 721
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
G + TYTT+++++ E + S+ + M+ K I +TYT V+ L +
Sbjct: 590 HGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQE 649
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ + E+M P VSY ++ +++A +Y +M+ L P TY +L+
Sbjct: 650 SCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILIN 709
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
G ++A + +Q V +K A +I+ C G+ ++ R M E
Sbjct: 710 GFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVE 764
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 84/426 (19%), Positives = 165/426 (38%), Gaps = 20/426 (4%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S GF + T +L +++++ +F M+ G+ D +TY++++H L G+V
Sbjct: 414 SHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQ 473
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++E+M P + + A + L ++ +A + +I L + Y +++
Sbjct: 474 QAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMI 533
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ ++ G EA++++ ++ E G+ P N L+ C + +L +K + L
Sbjct: 534 DGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLE 593
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ + + SLL E +S+ A GP I +V+
Sbjct: 594 PNAVTYTTLMNVYCEEGNMQSLL---------ELLSEMKAKAI------GPTHITYTVVI 638
Query: 299 I-LLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L K+ L LL + + D +TII+ C R A ++ + +L
Sbjct: 639 KGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
Y LI ++ + +L Y +I + A+ V A +
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTII-KAHCAKGDVDKAVV 757
Query: 418 -FSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
F + E + Y+A+IG +A + M G+ P F VLL
Sbjct: 758 YFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFH 817
Query: 475 KLGRVS 480
+ G ++
Sbjct: 818 QCGHLN 823
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 73/161 (45%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+++ TYT ++ + ++ + E M G+ D V+Y +++ A D+
Sbjct: 623 KAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDM 682
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A ++++M L PT V+Y + + +K+A ++ + R + N Y YT +
Sbjct: 683 RKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTI 742
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
++ G ++A+ F +M E G + + +I + CK
Sbjct: 743 IKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCK 783
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 73/164 (44%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D+ +Y T++ F +A+ + +++ M + +VTY +++ GD+ A
Sbjct: 661 GLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDA 720
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
N+ ++ ++ +YT +K V +A +++M+++G + Y+ ++
Sbjct: 721 DNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGR 780
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
L + EA F M GV PD+ +L+ + G +
Sbjct: 781 LCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNS 824
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +++ F + + +Q + +N++ YT+++ GDVD AV + +M
Sbjct: 703 TYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQM 762
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K +I Y+A + L V EA + M+ G+ P+ + VL+ + G
Sbjct: 763 VEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHL 822
Query: 188 EEALEIFSKMQEAG 201
E+ ++M ++G
Sbjct: 823 NSEFELLAEMIKSG 836
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G + FT+ ++D FG+ + S ++E M G D VT+TS++ G+V+
Sbjct: 313 SSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVN 372
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
+ +WEEMK++ P + +Y + L +R++EA + + + + P + Y ++
Sbjct: 373 QGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVI 432
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ +AGK +EA I ++MQE +PDK ILI C G
Sbjct: 433 DGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGR 475
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 36 VNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEK 95
VN++ K H +++ L +G + D TYT+++ + + + + +F+ M
Sbjct: 262 VNEISKGHDLLKEDMLI-------KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 96 GINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEA 155
GI + T+ ++ G++ A+ ++E+M L C P +V++T+ + V +
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374
Query: 156 TDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEK 215
+++EM R L PN YTY VL+ L + + EA ++ + V P N +I+
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 434
Query: 216 CCKAGETRTIILILRYMKENR 236
CKAG+ I+ M+E +
Sbjct: 435 FCKAGKVDEANFIVAEMQEKK 455
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 165/436 (37%), Gaps = 56/436 (12%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
FF + NH TY ++ + S K VF+ M+ GI D+ ++
Sbjct: 95 FFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSY 154
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVS---YTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ G +D A N E+ CY VS Y + +L + V EA +++E ++
Sbjct: 155 ARMGKLDSAKNFLNEV---HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV 211
Query: 169 PNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILI 228
P+ Y++ +L+ L R G+ ++A E F M G PD + N LI C+
Sbjct: 212 PDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRV--------- 262
Query: 229 LRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEG 288
N ++ + + KE D L+ V P D + + T+ I G
Sbjct: 263 ------NEISKGHDLLKE-----------DMLIKGVSP----------DVITY-TSIISG 294
Query: 289 PLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAF 348
K ++ A L ++ I+ + + +I+ A++ +
Sbjct: 295 -----------YCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343
Query: 349 EYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSA 408
E + + + + +LI + + ++ EEM S VY A+LI+ L
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Query: 409 RRPVPAAKIFSLLPEDQKCTA--TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
R A L + Y +I + AG D+A I M K P TF
Sbjct: 404 NRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITF 463
Query: 467 NVLLAGLEKLGRVSDA 482
+L+ G GR+ +A
Sbjct: 464 TILIIGNCMKGRMVEA 479
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 13/238 (5%)
Query: 7 NVYKIL-----KYSTWDSAQ---DLLKNLPIKWDSYTVNQVLKTHPPMEK---AWLFFNW 55
N Y +L K DSA+ D +++ I DS + ++ ++ M K A F N
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V G F Y +L++ + + +F E D ++ ++ L G
Sbjct: 170 V-HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG 228
Query: 116 DVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE-MIQRGLPPNCYTY 174
++D A ++ M C+P IVSY + + + + D+ KE M+ +G+ P+ TY
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
T ++ + G + A E+F +M +G++P+ N+LI+ K G R+ +++ M
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM 346
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVF-ELMQEKGINIDAVTY 104
++KA+ FF + F D +Y T+++ F IS + E M KG++ D +TY
Sbjct: 230 IDKAFEFFQNMGNFGCF-PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
TS++ GD+ A +++EM P ++ + ++ A +Y++M+
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLL 348
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
G P+ T+T L++ R G+ + L+++ +M+ + P+ +LI CK R
Sbjct: 349 LGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIRE 408
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADEND 258
LR++K + + + ++ + F A + D
Sbjct: 409 ARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVD 442
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ R + + +TY +++ + RI + ++ + Y V+ AG V
Sbjct: 382 KVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKV 441
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A I EM+ K+C P +++T + + R+ EA + +MI+ P+ T L
Sbjct: 442 DEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSL 501
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQ 203
+ L++AG EA S++++A +Q
Sbjct: 502 ISCLLKAGMPNEA----SQIKQAALQ 523
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 127/325 (39%), Gaps = 23/325 (7%)
Query: 173 TYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
TY +LM L + G + A +F M+ G+ PD + +L+ + G+ + L +
Sbjct: 111 TYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEV 170
Query: 233 KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSI 292
+ + V+ L + D + P F+ D + + + I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230
Query: 293 DQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSV 352
D+ N ++S + +I+ VN + D LL + +
Sbjct: 231 DKAFEF-FQNMGNFGCFPDIVSY---------NTLINGFCRVNEISKGHD--LLKEDMLI 278
Query: 353 KMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLG------ 406
K ++ + Y ++I KL +E+ +EM +G + +LI G
Sbjct: 279 K-GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMR 337
Query: 407 SARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTF 466
SA + LP+ T+T+LI Y G ++ LK+++ M + + P++ T+
Sbjct: 338 SAMVMYEKMLLLGCLPD----VVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTY 393
Query: 467 NVLLAGLEKLGRVSDAEIYRKEKKS 491
VL+ L K R+ +A + + KS
Sbjct: 394 AVLINALCKENRIREARNFLRHLKS 418
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKG-INIDAVTYTSVMHWLSNAGDVDGAVNIWEE 126
TY+T++D R+ +FE M + I D +TY +++ G D A N+ +
Sbjct: 271 TYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQF 330
Query: 127 MKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGK 186
MK CYP + +Y+A + L ++++A V E+ GL P+ TYT L+ +L R GK
Sbjct: 331 MKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGK 390
Query: 187 YEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+EA+E+ +M+E G Q D N+L+ C+ G+ + ++ + + + L ++
Sbjct: 391 SDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRI 450
Query: 247 AL----QTFKVADENDSLLWQVHPQFSPEFISDND 277
L Q ++ + L + F P + + N+
Sbjct: 451 VLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNE 485
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 38/204 (18%)
Query: 70 TTMLDIFGEAKRIS-SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
+T L++ ++ R+ + K + ++ + + ++ + GD+D A I EEM+
Sbjct: 201 STCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMR 260
Query: 129 LKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR---------------------- 165
E YP +V+Y+ M L N RVKEA D+++EM+ R
Sbjct: 261 NSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGK 320
Query: 166 --------------GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
G PN Y Y+ L++ L + GK E+A + ++++ +G++PD
Sbjct: 321 PDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTS 380
Query: 212 LIEKCCKAGETRTIILILRYMKEN 235
LI C+ G++ I +L MKEN
Sbjct: 381 LINFLCRNGKSDEAIELLEEMKEN 404
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S G + + Y+ ++D + ++ K V ++ G+ DAVTYTS++++L G
Sbjct: 332 KSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKS 391
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A+ + EEMK C V++ + L + +EA D+ +++ Q+G+ N +Y ++
Sbjct: 392 DEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIV 451
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+ L + + + A E+ M G QP A N L+ CKAG
Sbjct: 452 LNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAG 494
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 51 LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHW 110
LF VSR D TY +++ F + + V + M+ G + Y++++
Sbjct: 291 LFEEMVSRDH-IVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDG 349
Query: 111 LSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPN 170
L G ++ A + E+K P V+YT+ + L N + EA ++ +EM + G +
Sbjct: 350 LCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQAD 409
Query: 171 CYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAA----CNILIEKC 216
T+ VL+ L R GK+EEAL++ K+ + GV +K + N L +KC
Sbjct: 410 SVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKC 459
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ G D TYT++++ + + E M+E G D+VT+ ++ L G
Sbjct: 367 KGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKF 426
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+++ E++ + Y SY + L +K A ++ M++RG P+ T L
Sbjct: 427 EEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNEL 486
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ L +AG ++A + E G QP +LI C+
Sbjct: 487 LVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICR 527
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 55/262 (20%)
Query: 13 KYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTM 72
K+ + DSA DL+K + P + A FN VS GF H+ TY T+
Sbjct: 89 KHISHDSAIDLIK---------------REKDP-QHALNIFNMVSEQNGFQHNNATYATI 132
Query: 73 LDIFGEAKRISSMKYVFELMQ------EKGINIDAVTY---------------------- 104
LD ++ V M +GI ++ + +
Sbjct: 133 LDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVR 192
Query: 105 --------TSVMHWLSNAGDVDGAVNIWEEMKLKECY-PTIVSYTAYMKILFLNDRVKEA 155
++ ++ L ++ VD A + K P + + +K N + A
Sbjct: 193 EKPSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSA 252
Query: 156 TDVYKEMIQRGLP-PNCYTYTVLMEYLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILI 213
++ +EM PN TY+ LM+ L R G+ +EA ++F +M + PD N+LI
Sbjct: 253 FEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLI 312
Query: 214 EKCCKAGETRTIILILRYMKEN 235
C+ G+ ++++MK N
Sbjct: 313 NGFCRGGKPDRARNVIQFMKSN 334
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 132/330 (40%), Gaps = 42/330 (12%)
Query: 188 EEALEIFSKMQEA-GVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKE 246
+ AL IF+ + E G Q + A +++K + + +L M +F
Sbjct: 107 QHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVN 166
Query: 247 ALQTFKVADENDSLLWQVHPQFSPE-FISDNDAVEFVTTDIEGPLS---IDQGLVLILLK 302
++ F + ++ LL H FS + + + + + ++T + L +D L+L
Sbjct: 167 LMKHFSKSSLHEKLL---HAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDLARKLLLHA 223
Query: 303 KKNL-----VAIDSLLSGIMDKSIQLDSA------------------VISTIIEVNCDHR 339
K++L V + ++L K+ LDSA ST+++ C +
Sbjct: 224 KRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNG 283
Query: 340 RRDGALLAFEYSVKMD-LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYL- 397
R A FE V D + + Y LI + + +++ M G VY
Sbjct: 284 RVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNY 343
Query: 398 -----GALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYK 452
G + +L A+ + K L P+ TYT+LI G +D+A+++ +
Sbjct: 344 SALVDGLCKVGKLEDAKGVLAEIKGSGLKPD----AVTYTSLINFLCRNGKSDEAIELLE 399
Query: 453 TMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
M G TFNVLL GL + G+ +A
Sbjct: 400 EMKENGCQADSVTFNVLLGGLCREGKFEEA 429
>gi|302814999|ref|XP_002989182.1| hypothetical protein SELMODRAFT_129427 [Selaginella moellendorffii]
gi|300143082|gb|EFJ09776.1| hypothetical protein SELMODRAFT_129427 [Selaginella moellendorffii]
Length = 614
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 115/499 (23%), Positives = 219/499 (43%), Gaps = 46/499 (9%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVLK---THPPMEKAWLFFNWVSRSRG 61
V + K D A +L+ + K D+ T N +L +E A + +SRS
Sbjct: 16 VDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKMSRSF- 74
Query: 62 FNHDRFTYTTMLDIFGEAKRI--SSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
D FTY +L +A RI + K L + + Y +++ L G D
Sbjct: 75 VKADAFTYNILLHGLCKAGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKVGKYDH 134
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ ++ +MKL P+ +SY + R + A ++++EM + P+ +T+ +++
Sbjct: 135 AMAVFRKMKL----PSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTVIQ 190
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA- 238
L +AGK++EAL+I +M P++ +L+ CKA +L M
Sbjct: 191 SLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDTVGCVP 250
Query: 239 ---LR-YPVFKEALQTFKVADENDSLLWQVHPQ--FSPEFISDNDAVE--FVTTDIEGPL 290
LR + + L E D+L+ ++ + +P+ + N ++ F D +G L
Sbjct: 251 DPNLRTFNIMIHGLCKANKVGEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAL 310
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEY 350
S+ + + L + + V ++++++G+ K+ ++D AV T++ RD A A +
Sbjct: 311 SLFKEMAR-LGRCRCSVTLNTVVTGLC-KAGEVDRAV--TLV--------RDSA-SARQA 357
Query: 351 SVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR 410
+V M Y +I KL F ++ +EM++ G +L+ RR
Sbjct: 358 TVFM--------YNVVIDKFAKLGRFEASKQLFQEMSRFGCHPDSVTFTILVSESCKQRR 409
Query: 411 PVPAAKIFSLLPEDQKCTAT---YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
A ++ + +++ C+ T + ++ +G + A K++++M GI L T+N
Sbjct: 410 THEALELVEQMTKNKGCSWTTLPFNMVLNALAKSGEMEAAGKVHRSMKVAGIECDLVTYN 469
Query: 468 VLLAGLEKLGRVSDAEIYR 486
LL G GR + YR
Sbjct: 470 TLLDGYFGAGRARSGDGYR 488
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 15/175 (8%)
Query: 21 QDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRS---RGFNHDRFTYTTMLD 74
+ + KN W + N VL ME A V RS G D TY T+LD
Sbjct: 418 EQMTKNKGCSWTTLPFNMVLNALAKSGEMEAA----GKVHRSMKVAGIECDLVTYNTLLD 473
Query: 75 -IFGEAKRISSMKY-VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAV-NIWEEMK-LK 130
FG + S Y VF + G D +++ +++ L G ++ AV W EM+ +
Sbjct: 474 GYFGAGRARSGDGYRVFGELLHSGCAPDTLSFNALLGCLCCDGRLEEAVAKFWGEMRERR 533
Query: 131 ECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAG 185
EC+P V++ ++ ++ A + EM+ RG P ++L+ L+++G
Sbjct: 534 ECWPDAVTHALLVRQCCKQRNIELACRIVDEMLHRGFVPTPGIASMLVN-LIQSG 587
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 365 ALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED 424
+L+ L K+N ++ E+M+++ + +L+H L A R A + S D
Sbjct: 49 SLLDGLFKVNKVEHAMKLYEKMSRSFVKADAFTYNILLHGLCKAGRIQEACQKLSAALRD 108
Query: 425 QKCTAT----YTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVS 480
++ Y ALIG G D A+ ++ RK PS ++N+++A K GR
Sbjct: 109 REAPVRHELLYEALIGGLCKVGKYDHAMAVF----RKMKLPSSMSYNIVIAACVKRGRNE 164
Query: 481 DA-EIYRKEK 489
A E++R+ K
Sbjct: 165 AAVELFREMK 174
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY L+ RI+ + V+E M G + D +TY++++H S A D A ++E M
Sbjct: 519 TYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETM 578
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C P V+Y + L + EA +++++M++RG P+ TYT L+ GK
Sbjct: 579 ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKI 638
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIE---KCCKAGETRTIILIL 229
E+A+E+F +M G PD A N L++ + K GE + + ++
Sbjct: 639 EQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVM 683
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 3/182 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG + TY +L + + +F M E+G + D VTYT++++ N G ++
Sbjct: 580 SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIE 639
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV +++EM K P +V+Y +K F + EA +++ M+ R P+ ++ +++
Sbjct: 640 QAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMI 699
Query: 179 EYLVRAGKYEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
+ L +A + ++A+E+F +M Q+ G PD N LI C GE R + + + +RL
Sbjct: 700 DGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC--GEQRLSEAMKVFKEIDRL 757
Query: 238 AL 239
L
Sbjct: 758 KL 759
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + D TY+T++ F A++ +FE M +G +AVTY ++H L D A
Sbjct: 547 GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEA 606
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++ +M + C P V+YT + ++++A +V+ EM+ +G P+ Y L++
Sbjct: 607 HELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 666
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN 235
RAGK EA ++F M +PD + NI+I+ KA + + M+++
Sbjct: 667 FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQD 721
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 187/468 (39%), Gaps = 33/468 (7%)
Query: 30 KWDSY-----TVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
KWD TV V+K +A FF W+ ++R F HD FTY +LD + +
Sbjct: 89 KWDGKSSCRETVGAVIKHLRDGGEALTFFRWL-QARNFKHDVFTYNCLLDKLIRHRDLKQ 147
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMK 144
VFE M +G+ + TY ++ + D AV + EM K P+ Y +
Sbjct: 148 AGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTE 207
Query: 145 ILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP 204
L + E + V+ +++ + L+ V K EA ++F M ++G +P
Sbjct: 208 CLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKP 267
Query: 205 DKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQV 264
D T ++L + K L + +F E K N + W
Sbjct: 268 DA---------------TIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNN--VAWTA 310
Query: 265 HPQFSPEFISDNDAVEFVTTDIEGPLSIDQG----LVLILLKKKNLVAIDSLLSGIMDKS 320
+ A E T ++ LS Q L+ +L++ + + I ++
Sbjct: 311 FLSGLCKSGKIEQAFEACRT-MQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRN 369
Query: 321 IQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
IQ S ++I+ C R D AL E +K + + LI L K + +
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ 429
Query: 381 EIVEEMTKAGHSLGVYLGAL--LIHRLGSARRPVPAAKIFSLLPEDQKCT---ATYTALI 435
E ++ M + S + L++ L A++ A IFS + ++ +Y+ LI
Sbjct: 430 EFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILI 489
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
+ +A K+YK M P++ T+N L GL + GR++DA+
Sbjct: 490 DGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQ 537
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ +A+ F+ + R F D +Y+ ++D F + + + +++ M + + TY
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+ ++ L G + A ++EEM C P +++Y+ + L + +A ++++ MI R
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY L+ L + K +EA E+F KM E G PD+ L+ C G+
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641
Query: 226 ILILRYM 232
+ + M
Sbjct: 642 VEVFDEM 648
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 10/238 (4%)
Query: 6 SNVYKILKYSTWDSAQDLLKNL-------PIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR 58
S + ++ K DSA LL+ + + S +N++ K +++A F + R
Sbjct: 379 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADK-IQEAQEFLQGMDR 437
Query: 59 S-RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM-QEKGINIDAVTYTSVMHWLSNAGD 116
+ F+Y ++L+ +AK++ +F M E+ D V+Y+ ++ +
Sbjct: 438 KISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDE 497
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+ A ++++M C P + +Y A++ L R+ +A VY+EM+ G P+ TY+
Sbjct: 498 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYST 557
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
L+ A K+++A E+F M G +P+ N L+ CK + + R M E
Sbjct: 558 LIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 615
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 182/425 (42%), Gaps = 30/425 (7%)
Query: 69 YTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMK 128
Y ++ + E+ RI + + + I + T SV+ L AG VD A+++ E M
Sbjct: 342 YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMI 401
Query: 129 LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR--GLPPNCYTYTVLMEYLVRAGK 186
+ P + +++ + L D+++EA + + M ++ +C++Y L+ L +A K
Sbjct: 402 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKK 461
Query: 187 YEEALEIFSKM-QEAGVQPDKAACNILIEKCCKAGE-TRTIILILRYMKENRL--ALRYP 242
+A IFS M E PD + +ILI+ CK E R L + + N + Y
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521
Query: 243 VFKEAL-QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL 301
F L + ++AD V SP+ I+ +T I G L
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVIT-------YSTLIHG----------FSL 564
Query: 302 KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERT 361
+K+ A + L ++ + + ++ + ++ C + D A F V+ + +R
Sbjct: 565 ARKHDQAHE-LFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRV 623
Query: 362 AYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL 421
Y L+ + + E+ +EM GH V L+ A +P A ++F ++
Sbjct: 624 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVM 683
Query: 422 PEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCR-KGIHPSLGTFNVLLAGLEKLG 477
Q C T ++ +I A D A+++++ M + G P L T+N L+ GL
Sbjct: 684 VSRQ-CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQ 742
Query: 478 RVSDA 482
R+S+A
Sbjct: 743 RLSEA 747
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 169/403 (41%), Gaps = 25/403 (6%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP-TIVSYTAYMKIL 146
+F M + G DA Y+ ++ ++D A ++ EM ++ P V++TA++ L
Sbjct: 256 LFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGL 315
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
+ ++++A + + M Q L + Y +L+ L+ +G+ ++A E ++ +QP
Sbjct: 316 CKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSS 374
Query: 207 AACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHP 266
C+ +I++ CKAG + + +L M + + AD+
Sbjct: 375 GTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADK---------I 425
Query: 267 QFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSA 326
Q + EF+ D +++ S + L + KK A + + ++S D
Sbjct: 426 QEAQEFLQGMD--RKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVV 483
Query: 327 VISTIIEVNC--DHRRRDGALLAFEYSVKMDLNL--ERTAYLALIGILIKLNTFPKVAEI 382
S +I+ C D R L Y +DLN T Y A + L++ +
Sbjct: 484 SYSILIDGFCKIDELGRAEKL----YKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539
Query: 383 VEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TATYTALIGVYF 439
EEM AG S V + LIH AR+ A ++F + + C TY L+
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMI-SRGCRPNAVTYNCLLHGLC 598
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
D+A ++++ M +G P T+ LL G +G++ A
Sbjct: 599 KESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S+G + D Y +L F A + K +F++M + D V++ ++ LS A +D
Sbjct: 650 SKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLD 709
Query: 119 GAVNIWEEMKLKE-CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
AV ++E M+ C P +V+Y + + L R+ EA V+KE+ + L P+ + + VL
Sbjct: 710 DAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVL 769
Query: 178 MEYL 181
+E +
Sbjct: 770 LEAI 773
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 89/164 (54%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G D TY +++D + K+++ K +F M + G+ + +Y +++ VD
Sbjct: 295 QGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDE 354
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+N+++EM K P +V+Y + + L + ++ A + EM RG+P + TY +++
Sbjct: 355 AMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILD 414
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
L + + ++A+ + +KM++ G+QPD ILI+ CK G +
Sbjct: 415 ALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 195/473 (41%), Gaps = 18/473 (3%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGF 62
+ ++ KI Y T S ++ I D T N ++ + F+ + +G+
Sbjct: 63 LGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGY 122
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
+ T TT++ +I + + + G +++ V Y ++++ L G A+
Sbjct: 123 EPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQ 182
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ + K P +V Y + + V EA D+Y EM+ +G+ P+ TY+ L+
Sbjct: 183 LLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFC 242
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYP 242
GK +A+ +F+KM + PD +IL++ CK G + +L M + +
Sbjct: 243 ILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI----- 297
Query: 243 VFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLK 302
K + T+ + L+ QV+ S I + A VT +++ + G K
Sbjct: 298 --KPDVVTYCSLMDGYCLVKQVNKAKS---IFNTMAQGGVTANVQSYNIMINGFC----K 348
Query: 303 KKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTA 362
K + +L + K+I D +++I+ C + AL + + ++
Sbjct: 349 IKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKIT 408
Query: 363 YLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF-SLL 421
Y +++ L K + K ++ +M G +Y +LI L R A IF LL
Sbjct: 409 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLL 468
Query: 422 PEDQKCTA-TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+ T TYT +I + DKAL + M G P+ T+ +++ L
Sbjct: 469 VKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSL 521
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+ KA FN +++ G + +Y M++ F + K++ +F+ M K I D VTY
Sbjct: 317 VNKAKSIFNTMAQG-GVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYN 375
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S++ L +G + A+ + +EM + ++Y + + L N +V +A + +M
Sbjct: 376 SLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE 435
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G+ P+ YTYT+L++ L + G+ ++A IF + G ++I+ C
Sbjct: 436 GIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKA 495
Query: 226 ILILRYMKENRLALRYPVFKEALQTFKVADEND 258
+ +L M++N ++ + + DEND
Sbjct: 496 LALLSKMEDNGCIPNAKTYEIIILSLFEKDEND 528
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 166/417 (39%), Gaps = 25/417 (5%)
Query: 75 IFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
I G +I+ + L +E GI D VT+ +++ S G + +++ + K
Sbjct: 62 ILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKG 121
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P ++ T +K L L ++ +A + +++ G N Y L+ L + G+ AL
Sbjct: 122 YEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAAL 181
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
++ ++ VQP+ N +I+ CK + M ++ + + F
Sbjct: 182 QLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGF 241
Query: 252 KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDS 311
+ + + + + S E N V + ++G K+ + +
Sbjct: 242 CILGKLNDAIGLFNKMISEEI---NPDVYTFSILVDG-----------FCKEGRVKEAKN 287
Query: 312 LLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILI 371
+L+ +M + I+ D ++++ C ++ + A F + + +Y +I
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347
Query: 372 KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLL-----PEDQK 426
K+ + + +EM V LI L + + A K+ + P D+
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK- 406
Query: 427 CTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TY +++ DKA+ + M +GI P + T+ +L+ GL K GR+ DA+
Sbjct: 407 --ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RG HD+ TY ++LD + ++ + M+++GI D TYT ++ L G +
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRL 457
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
A NI+E++ +K T+ +YT ++ ND +A + +M G PN TY ++
Sbjct: 458 KDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEII 517
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGV 202
+ L + + A ++ +M G+
Sbjct: 518 ILSLFEKDENDMAEKLLREMIARGL 542
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 22 DLLKNLPIKWDSYTVNQVL----KTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFG 77
D + + + D T N +L K H ++KA + + G D +TYT ++D
Sbjct: 395 DEMHDRGVPHDKITYNSILDALCKNHQ-VDKAIALLTKM-KDEGIQPDMYTYTILIDGLC 452
Query: 78 EAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIV 137
+ R+ + +FE + KG NI TYT ++ + D A+ + +M+ C P
Sbjct: 453 KGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAK 512
Query: 138 SYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+Y + LF D A + +EMI RGL
Sbjct: 513 TYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 67/373 (17%), Positives = 141/373 (37%), Gaps = 53/373 (14%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P I + + L + + A +++EM G+ + T+ +L+ + G + +
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKV 253
F+ + + G +P+ LI+ C G+ + + + +AL + + K T
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQAL----HFHDKVVALGFHLNKVCYGTL-- 167
Query: 254 ADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
I G L K A LL
Sbjct: 168 --------------------------------ING-----------LCKVGQTSAALQLL 184
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
+ K +Q + + +TII+ C + + A + V ++ + Y ALI L
Sbjct: 185 RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCIL 244
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATY 431
+ +M + VY ++L+ R A + +++ + + TY
Sbjct: 245 GKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTY 304
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEK-- 489
+L+ Y +KA I+ TM + G+ ++ ++N+++ G K+ +V +A KE
Sbjct: 305 CSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHC 364
Query: 490 KSIQADALSKDAV 502
K+I D ++ +++
Sbjct: 365 KNIIPDVVTYNSL 377
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
S+ + I+ K + ++ ++T+I+ C + AL + V + +L + Y LI L
Sbjct: 112 SVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGL 171
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS------LLPED 424
K+ +++ + V + +I + + A ++S + P+
Sbjct: 172 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD- 230
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEI 484
TY+ALI + G + A+ ++ M + I+P + TF++L+ G K GRV
Sbjct: 231 ---VVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRV----- 282
Query: 485 YRKEKKSIQADALSKDAVPMEEKICDLLYG 514
KE K++ A + + P C L+ G
Sbjct: 283 --KEAKNVLAMMMKQGIKPDVVTYCSLMDG 310
>gi|90399282|emb|CAH68243.1| H0306F03.10 [Oryza sativa Indica Group]
gi|125549952|gb|EAY95774.1| hypothetical protein OsI_17648 [Oryza sativa Indica Group]
Length = 442
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 3/180 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
SRG D +Y+ +D ++ + VF+ M++KG+ ID V Y + +H + A VD
Sbjct: 205 SRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVD 264
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A+ ++ +M C P ++ +K+L R KE ++M + G+ PN TY
Sbjct: 265 FAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFF 324
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+YL R +E L +F KM E G P +LI++ + G R + ++ + M+E L+
Sbjct: 325 QYLSRP---QEVLGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLS 381
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY +L + + + + ++ ++ M +G+ D +Y+ M L+ +G A +++EM
Sbjct: 179 TYNLLLRGWAKTRAWARLRQLWFDMDSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEM 238
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
K K +V+Y + + L V A +Y++M+ G PN T+ +++ L + G++
Sbjct: 239 KQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRF 298
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKC 216
+E +M + G++P N+L C
Sbjct: 299 KEGYAFVQQMHKFGIEP-----NVLTYHC 322
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
T+ T++ + + R + M + GI + +TY +LS +V G ++E+M
Sbjct: 284 TFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFFQYLSRPQEVLG---LFEKM 340
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ C+P + +Y +K ++ V+K M ++GL P+ + Y L++ L++ G
Sbjct: 341 LERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNSLIDALLQKGMV 400
Query: 188 EEALEIFSKMQEAGVQP 204
+ A + +M G+ P
Sbjct: 401 DLARKYDEEMLSKGLSP 417
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 56/113 (49%)
Query: 122 NIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYL 181
+W +M + + SY+ YM L + + +A V+KEM Q+G+ + Y + +
Sbjct: 198 QLWFDMDSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSV 257
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKE 234
A + A+ ++ +M +AG +P+ + N +++ CK G + ++ M +
Sbjct: 258 GLAQGVDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHK 310
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 18/186 (9%)
Query: 324 DSAVISTIIEVNCDHRRRDGAL-LAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D A +++ CDHRR D A L F + +T L L G K + ++ ++
Sbjct: 141 DEASFHALVDALCDHRRVDEAHHLCFGKDPPPFPPVTKTYNLLLRG-WAKTRAWARLRQL 199
Query: 383 VEEMTKAG-----HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ---KCTATYTAL 434
+M G HS +Y+ AL + +P A K+F + + A TA+
Sbjct: 200 WFDMDSRGVAKDLHSYSIYMDAL-----AKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAI 254
Query: 435 IGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD--AEIYRKEKKSI 492
V + G D A+++Y+ M G P+ TFN ++ L K GR + A + + K I
Sbjct: 255 HSVGLAQG-VDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGI 313
Query: 493 QADALS 498
+ + L+
Sbjct: 314 EPNVLT 319
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 114/240 (47%), Gaps = 5/240 (2%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHDRFTYTT 71
W+SA+ +LK + ++ +SY +++L ++ K F + R+ G + DR Y
Sbjct: 377 WESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNV 436
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
M+D FG+ + F+ M+ +G+ DAVT+ +++ +G + A ++E M+
Sbjct: 437 MIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESG 496
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
C P +Y + +R ++ + +M +GL N TYT L++ ++G++++A+
Sbjct: 497 CSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAI 556
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTF 251
E M+ G++P N LI + G + I R M+ + L V + F
Sbjct: 557 ECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAF 616
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/427 (19%), Positives = 166/427 (38%), Gaps = 23/427 (5%)
Query: 76 FGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT 135
F ++ ++ ++Q G++ T +V+ L NAG + A I+EE+K P
Sbjct: 266 FAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPR 325
Query: 136 IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFS 195
+Y A +K +K+A + EM + G P+ +TY++L++ AG++E A +
Sbjct: 326 TRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLK 385
Query: 196 KMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVAD 255
+M+ +GV+P+ + ++ G+ + +LR M+ + ++ + + TF +
Sbjct: 386 EMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCN 445
Query: 256 -----------------ENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
+ D++ W + N A E E S
Sbjct: 446 CLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYN 505
Query: 299 ILL----KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
I++ +++ + +LL + + + + +T++++ R A+ E +
Sbjct: 506 IMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSV 565
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
L T Y ALI + + M G V + LI+ G RR A
Sbjct: 566 GLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEA 625
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+ + E+ + TYT L+ DK +Y+ M G P +L +
Sbjct: 626 FSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSA 685
Query: 473 LEKLGRV 479
L + R
Sbjct: 686 LRYMERT 692
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 131/334 (39%), Gaps = 22/334 (6%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
GF+ D TY+ ++D + A R S + V + M+ G+ ++ ++ ++ + G +
Sbjct: 356 GFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKS 415
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+ EM+ P Y + + + A + M G+ P+ T+ L++
Sbjct: 416 FQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDC 475
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALR 240
++G + +A E+F MQE+G P NI+I + + +L M+ L
Sbjct: 476 HCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLAN 535
Query: 241 YPVFKEAL----QTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGL 296
+ + Q+ + D + L P N + +GL
Sbjct: 536 VVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYA---------QRGL 586
Query: 297 VLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL 356
+ ++ D L ++ V++++I + RR A +Y + DL
Sbjct: 587 SEQAINAFRVMRADGLKPSVL---------VLNSLINAFGEDRRDAEAFSVLQYMKENDL 637
Query: 357 NLERTAYLALIGILIKLNTFPKVAEIVEEMTKAG 390
+ Y L+ LI++ F KV + EEMT +G
Sbjct: 638 KPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSG 671
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 81/155 (52%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+S+G + TYTT++DI+G++ R E+M+ G+ + Y ++++ + G
Sbjct: 528 QSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLS 587
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A+N + M+ P+++ + + + R EA V + M + L P+ TYT L
Sbjct: 588 EQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTL 647
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
M+ L+R K+++ ++ +M +G PD+ A +L
Sbjct: 648 MKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAML 682
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 56 VSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAG 115
V R+ G ++++ FGE +R + V + M+E + D VTYT++M L
Sbjct: 596 VMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVE 655
Query: 116 DVDGAVNIWEEMKLKECYP 134
D ++EEM L C P
Sbjct: 656 KFDKVPAVYEEMTLSGCTP 674
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 401 LIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKG 458
+I LG+A R A IF L E T Y AL+ Y GS A I M R G
Sbjct: 297 VITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG 356
Query: 459 IHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
P T+++L+ GR A I KE
Sbjct: 357 FSPDEHTYSLLIDAYANAGRWESARIVLKE 386
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 191/470 (40%), Gaps = 24/470 (5%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
++NL +D V VL E A FF WV RS H+R + +++I G A +++
Sbjct: 3 IRNLVPSFDHELVYNVLHGAKNAEHALQFFRWVERSNLLEHNREIHLKIIEILGRASKLN 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M +KG+ D + ++ AG V +V ++++M+ TI SY A
Sbjct: 63 HARCILLDMPKKGLEWDEDMWVMMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALF 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K++ R + + +M+ G+ P +T+ VL+ +GK E A F M+ +
Sbjct: 123 KVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREIT 182
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD N +I + + MKE ++ + ++ + D D L
Sbjct: 183 PDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRL 242
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ- 322
V + I N A+ + T L+ L + + S+L ++DK +
Sbjct: 243 VE-EMKGLGIKPN-AITYST------------LLPGLCNAEKMSEARSILKEMVDKYVAP 288
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D+++ +I C D A + +++ + E Y LI K + K ++
Sbjct: 289 TDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIEYYCKAGQYDKAVKL 348
Query: 383 VEEMT------KAGHSLGVYLGAL--LIHRLGSARRPVPAAKIF-SLLPEDQKCTATYTA 433
++++ + +L + L A LI L + + A + L+ + +
Sbjct: 349 LDKLIEKDIILRPQSTLHMELSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQDPTSLNT 408
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 409 LIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAK 458
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 153/347 (44%), Gaps = 21/347 (6%)
Query: 52 FFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWL 111
+FN + + G R T+ ++ F + ++ + FE M+ + I D +TY ++++
Sbjct: 137 YFNKMV-NEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVITYNTMINGY 195
Query: 112 SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNC 171
+ ++ A + EMK ++ PT+V+YT +K DRV +A + +EM G+ PN
Sbjct: 196 NRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNA 255
Query: 172 YTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILR 230
TY+ L+ L A K EA I +M + V P D + LI CKAG +L+
Sbjct: 256 ITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAADVLK 315
Query: 231 YMKENRLALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
M +R V EA ++ + A + D + + + + + D + +
Sbjct: 316 AM------IRLSVPTEAGHYGVLIEYYCKAGQYDKAVKLL------DKLIEKDIILRPQS 363
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ LS L+ L ++L+ +M +Q D ++T+I + D A
Sbjct: 364 TLHMELSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQ-DPTSLNTLIRGHSQEGSPDSA 422
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
+ ++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 423 FELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSMIENDH 469
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
L R +L +I IL + + I+ +M K G + ++I G A +
Sbjct: 41 LEHNREIHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKAGIVQESV 100
Query: 416 KIFSLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
K+F + E ++ +Y AL V G + + + M +GI P+ TFNVL+ G
Sbjct: 101 KLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGF 160
Query: 474 EKLGRVSDAEIYRKEKKS 491
G+V A + ++ KS
Sbjct: 161 FLSGKVETANRFFEDMKS 178
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TYT+++ E R+ + +F M KG+ VTYT ++H + G ++
Sbjct: 542 SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLE 601
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EM+ K P +++Y + + L R+ +A + + EM+++G+ PN Y+YT+L+
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIE---KCCKAGETRTI 225
G ++EAL ++ +M + GVQPD + L++ K CK R +
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 177/455 (38%), Gaps = 37/455 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+ F+ + +SR + D +L I + +S V+ M E GI VTY
Sbjct: 180 VEQCLSVFDKMIKSR-LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYN 238
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G V +++ EM+ + C P V+Y + L ++A + EM++
Sbjct: 239 TLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT 298
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL + YTY L+ G EAL + +M G P A N I CK G
Sbjct: 299 GLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDA 358
Query: 226 ILILRYM----------KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
+ L M N L Y ++ F + DE S+ P ++
Sbjct: 359 MQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY------LFPTIVTY 412
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N T ++G L ++ L L ++++ I D + ++ +
Sbjct: 413 N-------TLLDG-----------LCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C A F+ + L L+ AY I +KL + + EEM G +
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKT 453
+ +++ L A+++ + D TYT++I + G K +I+
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
M KG+ PS+ T+ VL+ G GR+ A IY E
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 164/421 (38%), Gaps = 24/421 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+LD + + ++ + MQ +G + VTY +++ LS G+ + A + EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ +Y + F + EA + +EM+ +G P TY + L + G+
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+A++ S M + PD + N LI C+ G L+ ++ L +
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
L E +V Q E I++ A + VT I LV K +L
Sbjct: 416 LDGLCRQGE-----LEVAQQLKVEMINEGIAPDIVTYTI---------LVNGSCKMGSLS 461
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
++ + ++LDS +T I A E + + Y ++
Sbjct: 462 MAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 521
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLL 421
L KL + +E++++M G +IH R +IF L
Sbjct: 522 DGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLT 581
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
P TYT LI + G ++A + M KGI P++ T+N L+ GL K+ R+
Sbjct: 582 PS----VVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQ 637
Query: 482 A 482
A
Sbjct: 638 A 638
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDV 117
G D + Y T I GE K + F L +E KG D + Y V+ L G++
Sbjct: 474 GLELDSYAYAT--RIVGELK-LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + ++M P V+YT+ + N R+++ +++ EM+ +GL P+ TYTVL
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVL 590
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ G+ E A FS+MQE G+ P+ N LI CK
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++GF D Y ++D + + + + M G+ D VTYTS++H G +
Sbjct: 507 AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLR 566
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
I+ EM K P++V+YT + R++ A + EM ++G+ PN TY L+
Sbjct: 567 KGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L + + ++A F++M E G+ P+K + ILI + C G + + + + M
Sbjct: 627 NGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 173/460 (37%), Gaps = 61/460 (13%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG + TY +++ + K + M + G+ + A TY +++ N G +
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYM----KILFLNDRVKEATD---------------- 157
A+++ EEM LK PT+ +Y +++ K+ ++D +++ +D
Sbjct: 321 AEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380
Query: 158 ---------------VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
++ E+ L P TY L++ L R G+ E A ++ +M G+
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL-RYPVFKEALQTFKVADENDSLL 261
PD IL+ CK G M L L Y + K+ D + +
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 500
Query: 262 WQ---VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
Q + F P+ I N V+ L K NL LL ++
Sbjct: 501 LQEEMLAKGFPPDLIIYNVVVDG------------------LCKLGNLEEASELLQKMVS 542
Query: 319 KSIQLDSAVISTIIEVNCDHRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+ D ++II + ++ R R G + +E K L Y LI
Sbjct: 543 DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSK-GLTPSVVTYTVLIHGHAGKGRLE 601
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALI 435
+ EM + G V LI+ L RR A F+ + E +YT LI
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ G+ +AL +YK M +G+ P T + LL L K
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN- 98
+T P M A F W GF F + +L+I + + S +V E + ++
Sbjct: 91 FRTSPRM--ALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR 148
Query: 99 -ID-----------AVTYTSVMHWL-SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+D +V ++ W+ S V+ ++++++M P + + ++I
Sbjct: 149 IVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRI 208
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L D + +A +VY+ M + G+ P TY L++ + GK ++ L++ S+MQ G P+
Sbjct: 209 LRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPN 268
Query: 206 KAACNILIEKCCKAGE 221
N+LI K GE
Sbjct: 269 DVTYNVLINGLSKKGE 284
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+++F+ + + +G + TY ++++ + +R+ F M EKGI + +YT
Sbjct: 600 LERAFIYFSEM-QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYT 658
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+++ N G+ A++++++M + P +++A +K L
Sbjct: 659 ILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 192/450 (42%), Gaps = 34/450 (7%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G + +TY ++ ++ +S V+E M KG +D Y ++ L+ AG VD A
Sbjct: 181 GLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQA 240
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
++E+MK K C P +YT +++ + + + EM+ RG N Y ++E
Sbjct: 241 YQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLIAYNTVIEA 300
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILIL----RYMKENR 236
L + ++ + + SKM E+ QP++ ++ ++ G+ + +L RY+ N+
Sbjct: 301 LGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDICDRYL--NK 358
Query: 237 LALRYPVFKEALQTFKVADENDSL--LWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ 294
Y V K ++ ++ ++ +W H D DA F++
Sbjct: 359 SIYSYLV-KSLCKSGHASEAHNVFCRMWNSHES------GDRDA--FISM---------- 399
Query: 295 GLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKM 354
L ++ K L AID LL + +K I D + + + ++ F+
Sbjct: 400 -LEVLCNSGKTLEAID-LLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKAS 457
Query: 355 DLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPA 414
+ + Y +I ++ K + + EEM + V LI+ LG A
Sbjct: 458 GIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEA 517
Query: 415 AKIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAG 472
+F + E TY+ LI + + D A ++ M +G P++ T+N+LL
Sbjct: 518 HILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDC 577
Query: 473 LEKLGRVSDAEIYRKEKKSIQADALSKDAV 502
LE+ G+ ++A K ++++ L+ D++
Sbjct: 578 LERRGKTAEAH---KHYETMKQQGLTPDSI 604
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
++ G D FTY M+ +G + +FE M+ D +TY ++++ L GD+
Sbjct: 455 KASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDL 514
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A +++EM+ K P + +Y+ ++ +++V A ++ EMI G PN TY +L
Sbjct: 515 DEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNIL 574
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++ L R GK EA + + M++ G+ PD +IL
Sbjct: 575 LDCLERRGKTAEAHKHYETMKQQGLTPDSITYSIL 609
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + D Y + G+ K++S + +F+ M+ GI D TY ++ G VD
Sbjct: 422 KGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDK 481
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A ++EEM+ C P +++Y + L N + EA ++KEM ++G P+ +TY+ L+E
Sbjct: 482 ASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIE 541
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
++ K + A +F +M G P+ NIL++ + G+T
Sbjct: 542 CFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKT 584
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 178/455 (39%), Gaps = 54/455 (11%)
Query: 61 GFNHDRFTYTTMLDIF-------GEAKR-------------ISSMKYV------------ 88
GF HD F+Y +L + GEA R IS++ +
Sbjct: 113 GFRHDAFSYNRILALLFRSKADPGEALRLVAQMERDGVAGNISTVNLLVGMGGGGVEVAR 172
Query: 89 -FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILF 147
EL ++ G+ ++ TY ++ + +V ++EEM K I +Y + L
Sbjct: 173 CLELAKKWGLRLNGYTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLLDALA 232
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
V +A V+++M Q+ P+ YTYT+L+ + G+ + L F +M G +
Sbjct: 233 KAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCALNLI 292
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
A N +IE K +I +L M E+ F +L +A E Q+H
Sbjct: 293 AYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQ--FTYSLTLDILATEG-----QLHRL 345
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAV 327
N+ ++ + SI LV L K + ++ + + D
Sbjct: 346 --------NEVLDICDRYLNK--SIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDA 395
Query: 328 ISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMT 387
+++EV C+ + A+ + ++ + Y + L KL ++ + ++M
Sbjct: 396 FISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMK 455
Query: 388 KAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSA 444
+G + ++ ++I G A+ +F + E C TY LI G
Sbjct: 456 ASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEM-EASSCKPDVITYNTLINCLGKNGDL 514
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRV 479
D+A ++K M KG P + T++ L+ K +V
Sbjct: 515 DEAHILFKEMQEKGYDPDVFTYSTLIECFGKSNKV 549
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 189/476 (39%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F H+R T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ TI SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P +T+ V++ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTXINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
V F +A+ + T L+ L + + +L +MDK +
Sbjct: 241 RLVEEMKG--FGIKPNAITYST------------LLPGLCNAEKMSEARVILKEMMDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I +C D A + ++ + E Y LI K + K
Sbjct: 287 APTDNSIFMRLISSHCXSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + + +H SA P A K +L+ + Q
Sbjct: 347 KLLDKLIEKD---IILRPQSTLHLEPSAYNPXIEYLCNNGQAXKAETLVRQLMKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAK 458
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 136/334 (40%), Gaps = 8/334 (2%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I+ D VTY + ++ ++
Sbjct: 143 SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTXINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXALRLVEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI C +G +L+ M +
Sbjct: 263 PGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCXSGNLDAAADVLKAMXRLSV 322
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ ++ F + D + + + I + + P +
Sbjct: 323 PTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNP------XI 376
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L ++L+ +M +Q D ++T+I + D A + ++ ++
Sbjct: 377 EYLCNNGQAXKAETLVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVD 435
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
E++AY +L+ +K N ++ M + H
Sbjct: 436 SEKSAYNSLVQSYLKKNEPXDAKAALDSMIENDH 469
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFNV++ G G
Sbjct: 105 KMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ KS
Sbjct: 165 KVETANRFFEDMKS 178
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 113/219 (51%), Gaps = 2/219 (0%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNH 64
++++ K+ YST S + + + + YT+N ++ + + + F+ +++ H
Sbjct: 52 LTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGH 111
Query: 65 --DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
D T+TT++ +I ++F+ M ++G + VTY ++++ L G+ A+
Sbjct: 112 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 171
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ M+ C P +V YT+ + L + +V EA +++ +M+ +G+ P+ +TYT L+ L
Sbjct: 172 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 231
Query: 183 RAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
+++ + ++M + + PD + +++ CK G+
Sbjct: 232 NLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 270
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 136/364 (37%), Gaps = 53/364 (14%)
Query: 117 VDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTV 176
+D A++ + + P+IV + + + + +M G+PPN YT +
Sbjct: 26 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85
Query: 177 LMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L+ + A + +K+ + G QPD LI C G+
Sbjct: 86 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK--------------- 130
Query: 237 LALRYPVFKEALQTF-KVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQG 295
EAL F K+ DE F P ++ T I G
Sbjct: 131 -------IGEALHLFDKMIDEG----------FQPNVVT-------YGTLING------- 159
Query: 296 LVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMD 355
L K N A LL + + Q D + ++II+ C R+ A F V
Sbjct: 160 ----LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQG 215
Query: 356 LNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAA 415
++ + Y +L+ L L + V ++ +M + V + + ++ L + A
Sbjct: 216 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 275
Query: 416 KIFSLLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGL 473
+I ++ + + TYT L+ + D+A+K++ M RKG P + ++ L+
Sbjct: 276 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAG 335
Query: 474 EKLG 477
+K G
Sbjct: 336 KKDG 339
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
RG D TYTT++D + VF++M KG D ++YT+ L NAG DG
Sbjct: 284 RGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT----LINAGKKDG 339
Query: 120 A--VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVK---EATDVYKEMIQRGLPPNCYTY 174
V++ E + L + P V A I D++K + + EM+ + PN +
Sbjct: 340 GGLVSLQEVIGLVKETPDAVKGGAVEVIR--KDKMKLFEKGRTLLNEMVNSKIMPNVVIF 397
Query: 175 TVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
+ +++ L + GK EA ++ M + GV+P+
Sbjct: 398 STVVDALCKEGKVMEAHDVVDMMIKRGVEPN 428
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 197/442 (44%), Gaps = 49/442 (11%)
Query: 88 VFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPT-IVSYTAYMKIL 146
V E+M E GI DA +YT +++ L G++ A+ + E+M+ + YPT V+Y + ++ L
Sbjct: 7 VMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKME-ENGYPTNTVTYNSLVRGL 65
Query: 147 FLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDK 206
++ + ++ + +++ +GL PN +TY+ L+E + EA+++ ++ G QP+
Sbjct: 66 CMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNL 125
Query: 207 AACNILIEKCCKAGETRTIILILRYMKE---NRLALRYPVFKEALQTFKVADENDSLLWQ 263
+ N+L+ CK G T I R + N + Y + +L +E + LL +
Sbjct: 126 VSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAE 185
Query: 264 V-HPQFSPEFISDNDAV-----------------EFVTTDIEGPLSIDQGLVLILLKKKN 305
+ + SP ++ N + E V + + ++ L K+
Sbjct: 186 MDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGK 245
Query: 306 LVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDL-NLERTA-- 362
L + L ++ + + I V C R A +S+ +L N +R++
Sbjct: 246 LDLVIKCLDQMIHHRCNPNEGTFNAIA-VLCKQGRVPEA-----FSIIQNLGNKQRSSTH 299
Query: 363 --YLALIGILI-KLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
Y +I L K NT+P +++ EMTK G Y + LI L A +IF
Sbjct: 300 DFYKGVITSLCRKGNTYPAF-QLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFR 358
Query: 420 LLPED--QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
LL E+ + + ALI + +G D +L I + M KG P+ T+ +++ G
Sbjct: 359 LLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEG----- 413
Query: 478 RVSDAEIYRKEKKSIQADALSK 499
I +E+K + A+ L +
Sbjct: 414 ------IAHEEEKELAAEVLKE 429
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+G + FTY+ +L+ + + ++ + + + KG + V+Y ++ L G +
Sbjct: 84 KGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEE 143
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
A+ + ++ K P +VSY ++ L R +EA + EM P+ TY +L+
Sbjct: 144 AIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIG 203
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENR 236
L G+ E A E+ +M A +P N +I CK G+ +I L M +R
Sbjct: 204 SLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHR 260
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G+ + +Y +L + R F + KG N + V+Y ++ L + G +
Sbjct: 118 AKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWE 177
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EM +E P++V+Y + L + R++ A +V EM++ P+ TY ++
Sbjct: 178 EANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPII 237
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAG 220
+L + GK + ++ +M P++ N I CK G
Sbjct: 238 AHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNA-IAVLCKQG 278
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 76/202 (37%), Gaps = 36/202 (17%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++ RI V + M A TY ++ L G +D + ++M
Sbjct: 197 TYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQM 256
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEA---------------TDVYK------------ 160
C P ++ A + +L RV EA D YK
Sbjct: 257 IHHRCNPNEGTFNA-IAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNT 315
Query: 161 --------EMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
EM + G P+ YTY+ L+ L G +EALEIF ++E +P N L
Sbjct: 316 YPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNAL 375
Query: 213 IEKCCKAGETRTIILILRYMKE 234
I CK+G T + IL M E
Sbjct: 376 ILGFCKSGRTDLSLDILEMMVE 397
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 131/343 (38%), Gaps = 72/343 (20%)
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+K+AT V + MI+ G+ P+ +YT L+ L + G A+++ KM+E G + N
Sbjct: 1 MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNS 60
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ--VHPQFS 269
L+ C G ++LQ D L+W+ V +F+
Sbjct: 61 LVRGLCMHGN----------------------LNQSLQLL------DKLMWKGLVPNEFT 92
Query: 270 PEFISDNDAVEFVTTDIEGPLSIDQGLVL---ILLK--KKNLVAIDSLLSGIMDKSIQLD 324
F+ + E +++ + L I+ K + NLV+ + LL+G+
Sbjct: 93 YSFLLEAAYKE---------RGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGL-------- 135
Query: 325 SAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVE 384
C R + A+ F N +Y ++ L + + +++
Sbjct: 136 -----------CKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLA 184
Query: 385 EMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT-----ATYTALIGVYF 439
EM S + +LI L R A F +L E + + TY +I
Sbjct: 185 EMDSEERSPSLVTYNILIGSLAFHGRIEHA---FEVLDEMVRASFKPSATTYNPIIAHLC 241
Query: 440 SAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
G D +K M +P+ GTFN +A L K GRV +A
Sbjct: 242 KEGKLDLVIKCLDQMIHHRCNPNEGTFNA-IAVLCKQGRVPEA 283
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 54 NWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSN 113
N ++ R HD F + + + + + ++E M + G D TY+S++ L
Sbjct: 289 NLGNKQRSSTHD-FYKGVITSLCRKGNTYPAFQLLYE-MTKFGFVPDPYTYSSLIRGLCI 346
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
G +D A+ I+ ++ + P + ++ A + + R + D+ + M+++G PN T
Sbjct: 347 EGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETT 406
Query: 174 YTVLMEYLVRAGKYEEALEIFSKM 197
YT+++E + + E A E+ ++
Sbjct: 407 YTIIVEGIAHEEEKELAAEVLKEL 430
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 189/455 (41%), Gaps = 43/455 (9%)
Query: 46 MEKAWLFFNWVSRSR--GFNHDRFTYTTMLDIFGEAKRISS--MKYVFELMQEKGINIDA 101
+EKA N +SR R G+ D Y+ ++ + RI S ++ ++ +Q + +D
Sbjct: 200 LEKA---INLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDV 256
Query: 102 VTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKE 161
++ + AGD + A+ ++ P + A + L + R+ EA +++E
Sbjct: 257 QLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEE 316
Query: 162 MIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGE 221
M GL P Y L++ V+AG ++A I S+M+ +GV PD+ ++LI+ AG
Sbjct: 317 MKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGR 376
Query: 222 TRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEF----ISDND 277
+ ++L+ M+ N + VF L +++ E WQ Q E + +
Sbjct: 377 WESARIVLKEMEANNIMPNSYVFSRILASYRDRGE-----WQKSFQVLKEMKNSGVRPDR 431
Query: 278 AVEFVTTDIEGPLS-IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNC 336
V D G S +D + D +LS + IQ D+ +T+I+ +C
Sbjct: 432 HFYNVMIDTFGKFSCLDHA----------MDTFDKMLS----EGIQPDTVTWNTLIDCHC 477
Query: 337 DHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVY 396
+ A FE ++ + T + +I + + V ++ M G V
Sbjct: 478 KAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVV 537
Query: 397 LGALLIHRLGSARRPVPAAKIFSLLPEDQK------CTATYTALIGVYFSAGSADKALKI 450
LI G + R A + ED K + Y ALI Y G +++A+
Sbjct: 538 TYTTLIDIYGKSGRFSDAIECL----EDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNA 593
Query: 451 YKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIY 485
++ M + PSL N L+ + R DAE +
Sbjct: 594 FRLMRADSLKPSLLALNSLINAFGEDRR--DAEAF 626
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 17 WDSAQDLLKNLP---IKWDSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHDRFTYTT 71
W+SA+ +LK + I +SY +++L ++ + F + ++ G DR Y
Sbjct: 377 WESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNV 436
Query: 72 MLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKE 131
M+D FG+ + F+ M +GI D VT+ +++ A + A ++EEM K
Sbjct: 437 MIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKG 496
Query: 132 CYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEAL 191
P + ++ + +R + + M GL PN TYT L++ ++G++ +A+
Sbjct: 497 FSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAI 556
Query: 192 EIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL 237
E M+ AG++P N LI + G + + R M+ + L
Sbjct: 557 ECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSL 602
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
RS G + TYTT++DI+G++ R S E M+ G+ + Y ++++ + G
Sbjct: 528 RSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLS 587
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ AVN + M+ P++++ + + + R EA V K M + L P+ TYT L
Sbjct: 588 EQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTL 647
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
M+ L+R K+ + ++ +M AG PD+ A +L
Sbjct: 648 MKALIRVDKFNKVPSVYEEMILAGCTPDRKARAML 682
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 87/473 (18%), Positives = 182/473 (38%), Gaps = 68/473 (14%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVM 108
A+ +W+ + Y+ ++ G ++++ F L Q++ ++ +TY +++
Sbjct: 137 AYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYE---AFLLSQQQALS--PLTYNALI 191
Query: 109 HWLSNAGDVDGAVNIWEEMKLKECYPT-IVSYTAYMKILFLNDRVKEA--TDVYKE---- 161
+ + D++ A+N+ M+ ++ YP+ V+Y+ ++ L ++R+ +Y E
Sbjct: 192 NACARNNDLEKAINLISRMR-QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCD 250
Query: 162 ------------------------------MIQ-RGLPPNCYTYTVLMEYLVRAGKYEEA 190
M+Q GL P T ++ L +G+ EA
Sbjct: 251 KLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEA 310
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQT 250
IF +M++ G++P A N L++ KAG + I+ M+ + ++ + +
Sbjct: 311 EAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDA 370
Query: 251 FKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAID 310
+ A +S + + + ++ + + ++ K + V D
Sbjct: 371 YSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPD 430
Query: 311 SLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGIL 370
+M I T + +C D A+ F+ + + + + LI
Sbjct: 431 RHFYNVM----------IDTFGKFSC----LDHAMDTFDKMLSEGIQPDTVTWNTLIDCH 476
Query: 371 IKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARR------PVPAAKIFSLLPED 424
K + E+ EEM + G S V ++I+ G R + + LLP
Sbjct: 477 CKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPN- 535
Query: 425 QKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
TYT LI +Y +G A++ + M G+ PS +N L+ + G
Sbjct: 536 ---VVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKG 585
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 194/476 (40%), Gaps = 32/476 (6%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKR 81
+ ++NL +D V VL + E A FF WV RS F HBR T+ +++I G A +
Sbjct: 1 NTIRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHBRETHLKIIEILGRASK 60
Query: 82 ISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTA 141
++ + + M +KG+ D + ++ G V +V ++++M+ T+ SY A
Sbjct: 61 LNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLKSYDA 120
Query: 142 YMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAG 201
K++ R A + +M+ G+ P + VL+ +GK E A F M+
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSRE 180
Query: 202 VQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLL 261
+ PD N +I + + MK + + ++ + D+ D L
Sbjct: 181 ISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL 240
Query: 262 WQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSI 321
++ + I N A+ + T L+ L + + S+L ++DK +
Sbjct: 241 -RLXEEMKGFGIKPN-AITYST------------LLPGLCNAEKMSEARSILKEMVDKYL 286
Query: 322 Q-LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVA 380
D+++ +I C D A + +++ + E Y LI K + +
Sbjct: 287 APTDNSIFMRLITSQCTSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDQAV 346
Query: 381 EIVEEMTKAGHSLGVYLGALLIHRLGSARRPV--------PAAKIFSLLPE-----DQKC 427
++++++ + L +H SA P+ AAK +L+ + Q
Sbjct: 347 KLLDKLIEKDIILR---PQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDP 403
Query: 428 TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
TA T + G + GS D A ++ K M R+ + +N L+ K +DA+
Sbjct: 404 TALNTLIRG-HSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKRNEPADAK 458
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 141/340 (41%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R + ++ F + ++ + FE M+ + I+ D VTY ++++ ++
Sbjct: 143 SEGIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ PN TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLXEEMKGFGIKPNAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI C +G +L+ M
Sbjct: 263 PGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGHLDAASDVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ F + D + + + I + + P+
Sbjct: 318 -IRLSVPTEAGHYGVLIENFCKXGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPM- 375
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
+ L ++L+ ++ +Q D ++T+I + D A +
Sbjct: 376 -----IEYLCNNGQAAKAETLVRQLLKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K N ++ M + H
Sbjct: 430 LRRKVDSEKSAYNSLVQSYLKRNEPADAKAALDSMIENDH 469
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
+R +L +I IL + + I+ +M K G + ++I G + K+F
Sbjct: 44 BRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLF 103
Query: 419 SLLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+ E ++ +Y AL V G A + + M +GI P+ FNVL+ G
Sbjct: 104 QKMEELGVERTLKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLS 163
Query: 477 GRVSDAEIYRKEKKS 491
G+V A + ++ KS
Sbjct: 164 GKVETANRFFEDMKS 178
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 178/445 (40%), Gaps = 64/445 (14%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+ W + + R G + + +T+ + + ++ + E M+E+G + D VTY ++
Sbjct: 239 QCWELYEEMGRI-GVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTL 297
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ G ++ A +++ M + P +VSYT+ M+ L RV+EA ++ MI RG+
Sbjct: 298 IDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGM 357
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
P+ Y L+ + G +EA + +M G+ PD C IL+E
Sbjct: 358 DPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEG------------ 405
Query: 228 ILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIE 287
Y +E RL AL N VE +
Sbjct: 406 ---YGREGRLI-------SAL---------------------------NLVVEIQKLGVT 428
Query: 288 GPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLA 347
I + L++ L ++ A SLL I++ S Q DS + + +IE C ALL
Sbjct: 429 VAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLL 488
Query: 348 FEYSVKMDLNLERTAYLALIGILIKLNTFPK----VAEIVEEMTKAGHSLGVYLGALLIH 403
+ + Y +LI + ++N + E+VE H + L
Sbjct: 489 KLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYC- 547
Query: 404 RLGSARRP----VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGI 459
+ G+A + V AK F + ++ +L+ VY G+ K +++ M + G
Sbjct: 548 KEGNADKAESLLVSFAKDFQFFDSE-----SFNSLVKVYRDVGNETKLMELQDRMLKAGF 602
Query: 460 HPSLGTFNVLLAGLEKLGRVSDAEI 484
P+ T ++ G+ K R++ +
Sbjct: 603 LPNSLTCRYIIHGIWKSMRLNKQRV 627
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 180/439 (41%), Gaps = 51/439 (11%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++G + TY ++ + + + + + LM+++G+ + VTYT ++H SN G ++
Sbjct: 257 AKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIE 316
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A ++EEM+ K + YT+ + + VK A ++ EM +GL P+ +TY L+
Sbjct: 317 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALI 376
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLA 238
+ +AG+ E A + ++MQ G+ + N LI+ C++G M + L
Sbjct: 377 HGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESG-----------MVDEALR 425
Query: 239 LRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVL 298
L+ + K+ L+ +D+ SI GL
Sbjct: 426 LQVVMEKKGLE----------------------------------SDVFAYNSIASGLCK 451
Query: 299 ILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNL 358
+ K + LL ++++ + ++ +T+I++ C A F +
Sbjct: 452 LNRKDE----AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVP 507
Query: 359 ERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF 418
Y LI K + ++ +E+ G VY LIH + A K+F
Sbjct: 508 NIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLF 567
Query: 419 SLLPEDQ--KCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKL 476
+P+ TYTA+I G +++A K+Y M G+ P ++ L+ L
Sbjct: 568 DEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627
Query: 477 GRVSDAEIYRKEKKSIQAD 495
+I + K+ + D
Sbjct: 628 DESISMQIQGSQVKANKVD 646
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 47 EKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTS 106
E L F+ V R G + + ++TT++DI+ + K VF M+EKG + +TY
Sbjct: 457 EAKGLLFSMVER--GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNV 514
Query: 107 VMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRG 166
++ S G++ A + +E++ + P + + T+ + ++ +V A ++ EM QRG
Sbjct: 515 LIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG 574
Query: 167 LPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTII 226
L PN TYT ++ L + G+ EEA +++ +M+E G+ PD + L+ A E+ ++
Sbjct: 575 LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESISMQ 634
Query: 227 LILRYMKENRL 237
+ +K N++
Sbjct: 635 IQGSQVKANKV 645
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 181/437 (41%), Gaps = 40/437 (9%)
Query: 60 RGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDG 119
+GF+ D + L ++ S F M + + + T V+ L GDV+
Sbjct: 188 KGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEM 247
Query: 120 AVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ +E+ K +V+Y A+++ F + ++ M + G+ N TYT+L+
Sbjct: 248 GRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIH 307
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL 239
GK EEA +F +M+E G++ D +I C++G + +++ M + L
Sbjct: 308 GFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIP 367
Query: 240 RYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS---IDQGL 296
+ + A + ++ V+ + + I N + T I+G +D+ L
Sbjct: 368 SAHTYGALIHGVCKAGQMEAAQMLVN-EMQGKGIDLNPVI--FNTLIDGYCESGMVDEAL 424
Query: 297 VL-ILLKKKNL----VAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
L ++++KK L A +S+ SG+ C R+D A
Sbjct: 425 RLQVVMEKKGLESDVFAYNSIASGL-------------------CKLNRKDEAKGLLFSM 465
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRP 411
V+ ++ ++ LI I K F + + EM + G+ + +LI
Sbjct: 466 VERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNM 525
Query: 412 VPAAKI------FSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGT 465
A K+ L+P+ C T+LI G D ALK++ M ++G+ P++ T
Sbjct: 526 KEAHKLKDELENRGLIPDVYTC----TSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVT 581
Query: 466 FNVLLAGLEKLGRVSDA 482
+ +++GL K GR +A
Sbjct: 582 YTAMISGLSKDGRSEEA 598
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 11/232 (4%)
Query: 32 DSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFEL 91
+S V++ L+ MEK +G D F Y ++ + R K +
Sbjct: 416 ESGMVDEALRLQVVMEK-----------KGLESDVFAYNSIASGLCKLNRKDEAKGLLFS 464
Query: 92 MQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDR 151
M E+G++ + +++T+++ G+ A ++ EM+ K P I++Y +
Sbjct: 465 MVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGN 524
Query: 152 VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNI 211
+KEA + E+ RGL P+ YT T L+ GK + AL++F +M + G+ P+
Sbjct: 525 MKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTA 584
Query: 212 LIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
+I K G + + MKE L V+ + + ADE+ S+ Q
Sbjct: 585 MISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESISMQIQ 636
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
ME A + N + + +G + + + T++D + E+ + + +M++KG+ D Y
Sbjct: 385 MEAAQMLVNEM-QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYN 443
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
S+ L D A + M + P +S+T + I EA V++EM ++
Sbjct: 444 SIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK 503
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G PN TY VL++ + G +EA ++ +++ G+ PD C LI C G+
Sbjct: 504 GNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMA 563
Query: 226 ILILRYMKENRL 237
+ + M + L
Sbjct: 564 LKLFDEMPQRGL 575
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A F + R +G D + YT+++ + + +F+ M +KG+ A TY
Sbjct: 315 IEEAQRLFEEM-REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG 373
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLK--ECYPTI--------------------------- 136
+++H + AG ++ A + EM+ K + P I
Sbjct: 374 ALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKK 433
Query: 137 ------VSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEA 190
+Y + L +R EA + M++RG+ PN ++T L++ + G + EA
Sbjct: 434 GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEA 493
Query: 191 LEIFSKMQEAGVQPDKAACNILIEKCCKAGETR 223
+F +M+E G P+ N+LI+ K G +
Sbjct: 494 KRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 526
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 88/160 (55%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G D TYT+++ E R+ + +F M KG+ VTYT ++H + G ++
Sbjct: 542 SDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLE 601
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EM+ K P +++Y + + L R+ +A + + EM+++G+ PN Y+YT+L+
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
G ++EAL ++ +M + GVQPD + L+++ K
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 178/455 (39%), Gaps = 37/455 (8%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+ F+ + +SR + D +L I + +S V+ M E GI VTY
Sbjct: 180 VEQCLSVFDKMIKSR-LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYN 238
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ G V +++ EM+ + C P V+Y + L ++A + EM++
Sbjct: 239 TLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKT 298
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
GL + YTY L+ G EAL + +M G P A N I CK G
Sbjct: 299 GLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDA 358
Query: 226 ILILRYM----------KENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISD 275
+ L M N L Y ++ F + DE S+ P ++
Sbjct: 359 MQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY------LFPTIVTY 412
Query: 276 NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVN 335
N ++ + +G L + Q L + ++ ++ I D + ++ +
Sbjct: 413 NTLLDGLCR--QGELEVAQQLKVEMI----------------NEGIAPDIVTYTILVNGS 454
Query: 336 CDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGV 395
C A F+ + L L+ AY I +KL + + EEM G +
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514
Query: 396 YLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATYTALIGVYFSAGSADKALKIYKT 453
+ +++ L A+++ + D TYT++I + G K +I+
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574
Query: 454 MCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKE 488
M KG+ PS+ T+ VL+ G GR+ A IY E
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 164/421 (38%), Gaps = 24/421 (5%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY T+LD + + ++ + MQ +G + VTY +++ LS G+ + A + EM
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ +Y + F + EA + +EM+ +G P TY + L + G+
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEA 247
+A++ S M + PD + N LI C+ G L+ ++ L +
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
Query: 248 LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV 307
L E +V Q E I++ A + VT I LV K +L
Sbjct: 416 LDGLCRQGE-----LEVAQQLKVEMINEGIAPDIVTYTI---------LVNGSCKMGSLS 461
Query: 308 AIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALI 367
++ + ++LDS +T I A E + + Y ++
Sbjct: 462 MAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 521
Query: 368 GILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIF------SLL 421
L KL + +E++++M G +IH R +IF L
Sbjct: 522 DGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLT 581
Query: 422 PEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSD 481
P TYT LI + G ++A + M KGI P++ T+N L+ GL K+ R+
Sbjct: 582 PS----VVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQ 637
Query: 482 A 482
A
Sbjct: 638 A 638
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQE---KGINIDAVTYTSVMHWLSNAGDV 117
G D + Y T I GE K + F L +E KG D + Y V+ L G++
Sbjct: 474 GLELDSYAYAT--RIVGELK-LGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
+ A + ++M P V+YT+ + N R+++ +++ EM+ +GL P+ TYTVL
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVL 590
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCK 218
+ G+ E A FS+MQE G+ P+ N LI CK
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
++GF D Y ++D + + + + M G+ D VTYTS++H G +
Sbjct: 507 AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLR 566
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
I+ EM K P++V+YT + R++ A + EM ++G+ PN TY L+
Sbjct: 567 KGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYM 232
L + + ++A F++M E G+ P+K + ILI + C G + + + + M
Sbjct: 627 NGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 173/460 (37%), Gaps = 61/460 (13%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
+ RG + TY +++ + K + M + G+ + A TY +++ N G +
Sbjct: 261 QRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGML 320
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYM----KILFLNDRVKEATD---------------- 157
A+++ EEM LK PT+ +Y +++ K+ ++D +++ +D
Sbjct: 321 AEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 380
Query: 158 ---------------VYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
++ E+ L P TY L++ L R G+ E A ++ +M G+
Sbjct: 381 IYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGI 440
Query: 203 QPDKAACNILIEKCCKAGETRTIILILRYMKENRLAL-RYPVFKEALQTFKVADENDSLL 261
PD IL+ CK G M L L Y + K+ D + +
Sbjct: 441 APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS 500
Query: 262 WQ---VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
Q + F P+ I N V+ L K NL LL ++
Sbjct: 501 LQEEMLAKGFPPDLIIYNVVVDG------------------LCKLGNLEEASELLQKMVS 542
Query: 319 KSIQLDSAVISTIIEVNCDHRR-RDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
+ D ++II + ++ R R G + +E K L Y LI
Sbjct: 543 DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSK-GLTPSVVTYTVLIHGHAGKGRLE 601
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQ--KCTATYTALI 435
+ EM + G V LI+ L RR A F+ + E +YT LI
Sbjct: 602 RAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILI 661
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEK 475
+ G+ +AL +YK M +G+ P T + LL L K
Sbjct: 662 NENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGK 701
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 40 LKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGIN- 98
+T P M A F W GF F + +L+I + + S +V E + ++
Sbjct: 91 FRTSPRM--ALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR 148
Query: 99 -ID-----------AVTYTSVMHWL-SNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKI 145
+D +V ++ W+ S V+ ++++++M P + + ++I
Sbjct: 149 IVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRI 208
Query: 146 LFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPD 205
L D + +A +VY+ M + G+ P TY L++ + GK ++ L++ S+MQ G P+
Sbjct: 209 LRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPN 268
Query: 206 KAACNILIEKCCKAGE 221
N+LI K GE
Sbjct: 269 DVTYNVLINGLSKKGE 284
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E+A+++F+ + + +G + TY ++++ + +R+ F M EKGI + +YT
Sbjct: 600 LERAFIYFSEM-QEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYT 658
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKIL 146
+++ N G+ A++++++M + P +++A +K L
Sbjct: 659 ILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 91/166 (54%)
Query: 68 TYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM 127
TY ++D + +A I + + +F+ M + G+ + VT +++ + G ++GAV + EM
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM 477
Query: 128 KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKY 187
+ K V+YTA ++ + +++A +++ EM++ G P+ Y L+ L +AGK
Sbjct: 478 QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKL 537
Query: 188 EEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
+ A + SKM+EAG PD + N+LI C+ + +L+ M+
Sbjct: 538 DRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEME 583
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYT 105
+E A F+ +++ G + T T++D + RI+ F MQ KG+ +AVTYT
Sbjct: 432 IEAARELFDQMNKD-GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490
Query: 106 SVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQR 165
+++ N +++ A+ +++EM C P + Y + L ++ A+ V +M +
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
G P+ ++ VL+ R K +EA E+ +M+ AG++PD N LI K G+ T
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610
Query: 226 ILILRYM 232
+++ M
Sbjct: 611 HRLMKKM 617
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 1/190 (0%)
Query: 43 HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAV 102
H + A FFN + + +G + TYT ++ F I +F+ M E G + DA+
Sbjct: 464 HGRINGAVEFFNEM-QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAI 522
Query: 103 TYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEM 162
Y +++ LS AG +D A + +MK P IVS+ + +++ EA ++ KEM
Sbjct: 523 VYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM 582
Query: 163 IQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
G+ P+ TY L+ + + G + A + KM + G+ P LI C G
Sbjct: 583 ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNL 642
Query: 223 RTIILILRYM 232
+ I R M
Sbjct: 643 DEAMKIFRDM 652
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 157/428 (36%), Gaps = 35/428 (8%)
Query: 70 TTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKL 129
+L G A+ M + M+E I + VT+ +++ L VD A+ ++E+M
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368
Query: 130 KECY-----PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP---PNCYTYTVLMEYL 181
E P +++Y + L R +E + + M R P PN TY L++
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERM--RSQPRCMPNTVTYNCLIDGY 426
Query: 182 VRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRY 241
+A E A E+F +M + GV P+ N L++ CK G + M+ L
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486
Query: 242 PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQ----GLV 297
+ ++ F + + A+E +E S D L+
Sbjct: 487 VTYTALIRAFCNVNNIEK------------------AMELFDEMLEAGCSPDAIVYYTLI 528
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
L + L +LS + + D + +I C + D A + +
Sbjct: 529 SGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIK 588
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKI 417
+ Y LI K F ++++M K G V LIH A KI
Sbjct: 589 PDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKI 648
Query: 418 FSLLPEDQKC---TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLE 474
F + K T Y LI D AL + M KG+ P+ TFN + GL+
Sbjct: 649 FRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQ 708
Query: 475 KLGRVSDA 482
+ +S A
Sbjct: 709 EKNWLSKA 716
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/538 (22%), Positives = 218/538 (40%), Gaps = 64/538 (11%)
Query: 5 ISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLK---THPPMEKAWLFFNWVSRSRG 61
+ + K LK+ W A ++ P+ S+T+ V + P L S+S
Sbjct: 97 LGSTAKALKFFNWVQANSPCQDSPLL--SFTLEAVFEHASREPNSHNKLLDLFKTSKSHK 154
Query: 62 FNHDRFTYTTMLDIFGEAKRISSMKYVFE-------LMQEKGINIDAVTYTSVMHWLSNA 114
T ++ FG A+ + V+ L + I ID L
Sbjct: 155 IPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNILIDV---------LFRK 205
Query: 115 GDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMI--------QR 165
G VD A+++ +EM + K +P S T ++ L+ R K V +E I +
Sbjct: 206 GRVDDALHLLDEMLQPKAEFPP-NSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEH 264
Query: 166 GLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTI 225
+ PN T L+ L R+G+ + A ++ + + G + A+CN L+ +A E + +
Sbjct: 265 EVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRM 324
Query: 226 ILILRYMKENRL---ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFV 282
+L MKE + + + + L F+ DE + +++ S F+ + D + +
Sbjct: 325 NTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITY- 383
Query: 283 TTDIEGPLSI---DQGLVLILLKKK------NLVAIDSLLSGIMDKSI---------QLD 324
T I+G + ++GL L+ + N V + L+ G S+ Q++
Sbjct: 384 NTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMN 443
Query: 325 S-------AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
++T+++ C H R +GA+ F L Y ALI +N
Sbjct: 444 KDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIE 503
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
K E+ +EM +AG S + LI L A + A+ + S + E ++ LI
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQ 493
+ D+A ++ K M GI P T+N L++ K G S A +R KK ++
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA--HRLMKKMVK 619
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
G D TY T++ F + S+ + + M ++G+ VTY +++H G++D A
Sbjct: 586 GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEA 645
Query: 121 VNIWEEMK-LKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLME 179
+ I+ +M + P V Y + L ++V A + +M +G+ PN T+ + +
Sbjct: 646 MKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFK 705
Query: 180 YLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGET 222
L +A E+ +M E PD IL E GET
Sbjct: 706 GLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGET 748
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 193/473 (40%), Gaps = 28/473 (5%)
Query: 18 DSAQDLLKNLPIKWDSYTVNQVLKT---HPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLD 74
+ A+ L+ +P D++T N +++ + A F+ + RG + TY+ +LD
Sbjct: 236 EDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH-RGCSPSVVTYSILLD 294
Query: 75 IFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYP 134
+ + + M+ KG D VTY +++ + N GDVD A+NI + C P
Sbjct: 295 ATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKP 354
Query: 135 TIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIF 194
V+YT +K L ++R KE ++ EM P+ T+ ++ L + G + A+E+
Sbjct: 355 DAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVV 414
Query: 195 SKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVA 254
M E G D + +++ C G + +L +K + L+
Sbjct: 415 DHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCST 474
Query: 255 DENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLV--AIDSL 312
++ W+ + E + + + VT + V+ L +K LV AI +
Sbjct: 475 EQ-----WERAEELMAEMLCSDCPPDEVTFNT----------VVASLCQKGLVDRAI-RV 518
Query: 313 LSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIK 372
+ + + D + II+ C+ D A+ + + L+ L
Sbjct: 519 VEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCG 578
Query: 373 LNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC---TA 429
++ + +++ M ++ +I L A + ++ E+ C ++
Sbjct: 579 VDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN-GCVPNSS 637
Query: 430 TYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
TY+ ++ AG A AL++ M P L T+N +++ L K G++ +A
Sbjct: 638 TYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEA 688
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 179/442 (40%), Gaps = 25/442 (5%)
Query: 46 MEKAWLFFNWVSRSRGFNHDRFTYTTML-DIFGEAKRISSMKYVFELMQEKGINIDAVTY 104
+++A + F+ ++ G N +L R+S + VF + G + VTY
Sbjct: 166 IDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATVVTY 222
Query: 105 TSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQ 164
++++ AG ++ A + M P ++ ++ L + R+ +A V+ +M+
Sbjct: 223 NTMVNGYCRAGRIEDARRLINGMPFP---PDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279
Query: 165 RGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRT 224
RG P+ TY++L++ + Y +A+ + +M+ G +PD N+LI C G+
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339
Query: 225 IILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTT 284
+ IL + + + L++ ++ W+ + E S+N A + VT
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSER-----WKEVEELLAEMTSNNCAPDEVTF 394
Query: 285 DIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGA 344
+ QGLV + + +D + + D S+I++ CD R D A
Sbjct: 395 NTIVTSLCQQGLV-----DRAIEVVDHM----SEHGCVADIVTYSSILDGLCDVGRVDDA 445
Query: 345 LLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHR 404
+ + AY ++ L + + E++ EM + ++
Sbjct: 446 VELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVAS 505
Query: 405 LGSARRPVPAAKIFSLLPEDQKCTA---TYTALIGVYFSAGSADKALKIYKTMCRKGIHP 461
L A ++ + E+ C+ TY +I + D A+++ + G P
Sbjct: 506 LCQKGLVDRAIRVVEQMSEN-GCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP 564
Query: 462 SLGTFNVLLAGLEKLGRVSDAE 483
+ TFN LL GL + R DAE
Sbjct: 565 DIVTFNTLLKGLCGVDRWEDAE 586
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ T++ + + V E M E G + D VTY ++ L N +D A+ +
Sbjct: 495 DEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELL 554
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDR--------------------------------- 151
+++ C P IV++ +K L DR
Sbjct: 555 SDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQK 614
Query: 152 --VKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ +A + K M + G PN TY+++++ L++AGK + ALE+ S M PD
Sbjct: 615 GLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITY 672
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLA 238
N +I KAG+ + +LR M N L
Sbjct: 673 NTVISNLTKAGKMEEALDLLRVMVSNGLC 701
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 108/260 (41%), Gaps = 12/260 (4%)
Query: 11 ILKYSTWDSAQDLLKNLP---IKWDSYTVNQVLKTHPPM---EKAWLFFNWVSRSRGFNH 64
+ S D A +LL +L K D T N +LK + E A + RS
Sbjct: 541 LCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSN-CPP 599
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D T+ T++ + ++ ++M E G ++ TY+ V+ L AG A+ +
Sbjct: 600 DELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELL 659
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
M P +++Y + L +++EA D+ + M+ GL P+ TY L + R
Sbjct: 660 SGMT--NGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCRE 717
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRL---ALRY 241
+ A+ + ++Q+ G+ PD N ++ C+ T I +M + Y
Sbjct: 718 DGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTY 777
Query: 242 PVFKEALQTFKVADENDSLL 261
+ EAL + DE LL
Sbjct: 778 VILLEALAYGGLLDEAKRLL 797
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 4/170 (2%)
Query: 33 SYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELM 92
S V+ +LK KA +S D TY T++ +A ++ + +M
Sbjct: 640 SIVVDALLKAG----KAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVM 695
Query: 93 QEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRV 152
G+ D TY S+ + + D AV + ++ P Y + + R
Sbjct: 696 VSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRT 755
Query: 153 KEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGV 202
A D + M+ G P+ TY +L+E L G +EA + + + GV
Sbjct: 756 DLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGV 805
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 178/459 (38%), Gaps = 23/459 (5%)
Query: 32 DSYTVNQVLKTHPP---MEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYV 88
D+ T N +L H + +A + R G + TY T++ F I V
Sbjct: 242 DAVTYNTLLNAHCRKGMLGEARALLARMKRD-GIAPTQPTYNTLVSAFARLGWIKQATKV 300
Query: 89 FELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM-KLKECYPTIVSYTAYMKILF 147
E M G D TY + L AG VD A + +EM +L P +V+Y + F
Sbjct: 301 VESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACF 360
Query: 148 LNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKA 207
+A + +EM +G+ P T+ ++++ L + GK EEAL K+ E G+ PD
Sbjct: 361 KWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420
Query: 208 ACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQVHPQ 267
N LI+ CKAG ++ M L + TF + +L +
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGL---------KMDTFTLNTVLYNLCKMKRYE 471
Query: 268 FSPEFISDNDAVEFVTTDIEGPLSIDQGLVLIL-LKKKNLVAIDSLLSGIMDKSIQLDSA 326
+ E + FV P + G V+ K+ N L ++++ + +
Sbjct: 472 DAEELLHSPPQRGFV------PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525
Query: 327 VISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEM 386
+T+I+ C R A+ V+ L + T Y +I K +M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585
Query: 387 TKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSA 444
+ V L++ L + A K+F E K TY LI G
Sbjct: 586 VENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDV 645
Query: 445 DKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
D AL + M KG+ P T+NV+L+ L + GR +A
Sbjct: 646 DTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 143/336 (42%), Gaps = 28/336 (8%)
Query: 8 VYKILKYSTWDSAQDLLKNLPIKW---DSYTVNQVL----KTHPPMEKAWLFFNWVSRSR 60
+Y + K ++ A++LL + P + D + V+ K + P L+ + R
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK- 519
Query: 61 GFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGA 120
TY T++ +R+ + EKG+ D TY ++H GD++ A
Sbjct: 520 -LIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Query: 121 VNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEY 180
+M P +V+ M L L+ ++ +A +++ +++G + TY L++
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQS 638
Query: 181 LVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKEN-RLAL 239
+ + G + AL F M+ G+QPD N+++ +AG + +L + ++ +L+
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQ 698
Query: 240 RY--PVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
+ P+ K + ADE D + P+ + ++A+E + G
Sbjct: 699 SFACPLLKPS-----SADEADVKEHEGKPEAESSEKAQDNALETYMERLNG--------- 744
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIE 333
L L ++L +M K + +DS+ T++E
Sbjct: 745 --LCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLME 778
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 141/351 (40%), Gaps = 26/351 (7%)
Query: 157 DVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKC 216
DV++ +I+ L PN YT+ +L+ G +AL S MQ G+ PD N L+
Sbjct: 194 DVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH 253
Query: 217 CKAGETRTIILILRYMKENRLALRYPVFKEALQTFK----VADENDSLLWQVHPQFSPEF 272
C+ G +L MK + +A P + + F + + F P+
Sbjct: 254 CRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDL 313
Query: 273 ISDN-------------------DAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLL 313
+ N D +E ++T + ++ + LV K + LL
Sbjct: 314 RTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNT-LVDACFKWRCSSDALRLL 372
Query: 314 SGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKL 373
+ DK ++ + +++ C + + AL E + L + Y LI K
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432
Query: 374 NTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCT--ATY 431
K +++EM G + + +++ L +R A ++ P+ +Y
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492
Query: 432 TALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDA 482
++ YF + + AL+++ M + + PS+ T+N L+ GL ++ R+ +A
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 165/431 (38%), Gaps = 35/431 (8%)
Query: 63 NHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVN 122
NH +T+ ++ ++ MQ G++ DAVTY ++++ G + A
Sbjct: 207 NH--YTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARA 264
Query: 123 IWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLV 182
+ MK PT +Y + +K+AT V + M G P+ TY VL L
Sbjct: 265 LLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLC 324
Query: 183 RAGKYEEALEIFSKMQEAGVQ-PDKAACNILIEKCCKAGETRTIILILRYMKEN----RL 237
+AGK +EA + +M+ PD N L++ C K + + +L M++ L
Sbjct: 325 QAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384
Query: 238 ALRYPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLV 297
V K + K+ + L +P+ I+ N L+
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNT------------------LI 426
Query: 298 LILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLN 357
K N+ +L+ ++ K +++D+ ++T++ C +R + A +
Sbjct: 427 DAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486
Query: 358 LERTAYLALIGILIKLNTFPKVAEIVEEMT--KAGHSLGVY----LGALLIHRLGSARRP 411
+ +Y ++ K + ++M K S+ Y G + RL A
Sbjct: 487 PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK 546
Query: 412 VPAAKIFSLLPEDQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLA 471
+ L+P++ TY +I Y G + A + + M P + T N L+
Sbjct: 547 LNELVEKGLVPDE----TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602
Query: 472 GLEKLGRVSDA 482
GL G++ A
Sbjct: 603 GLCLHGKLDKA 613
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 42/200 (21%)
Query: 29 IKWDSYTVNQVLKT---HPPMEKAW-LFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISS 84
K D T N ++ H ++KA LF +WV + + D TY T++ + + +
Sbjct: 590 FKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV--DVITYNTLIQSMCKVGDVDT 647
Query: 85 MKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEM----KLKECY------P 134
+ F+ M+ KG+ DA TY V+ LS AG + A N+ ++ KL + + P
Sbjct: 648 ALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKP 707
Query: 135 T--------------------------IVSYTAYMKILFLNDRVKEATDVYKEMIQRGLP 168
+ + +Y + L ++KEA V EM+Q+G+P
Sbjct: 708 SSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMP 767
Query: 169 PNCYTYTVLMEYLVRAGKYE 188
+ TY LME L++ K +
Sbjct: 768 VDSSTYITLMEGLIKRQKRQ 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/385 (18%), Positives = 156/385 (40%), Gaps = 22/385 (5%)
Query: 65 DRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIW 124
D TY T++D + + S + E M++KG+ VT+ V+ L G ++ A+
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407
Query: 125 EEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRA 184
E++ + P +++Y + V +A + EM+ +GL + +T ++ L +
Sbjct: 408 EKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKM 467
Query: 185 GKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVF 244
+YE+A E+ + G PD+ + ++ K + + M E +L
Sbjct: 468 KRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI------ 521
Query: 245 KEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILL--- 301
++ T+ + + ++ +A++ + +E L D+ I++
Sbjct: 522 -PSISTYNTLIKGLCRMERL-----------KEAIDKLNELVEKGLVPDETTYNIIIHAY 569
Query: 302 -KKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLER 360
K+ +L + +++ S + D +T++ C H + D AL FE V+ ++
Sbjct: 570 CKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDV 629
Query: 361 TAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSL 420
Y LI + K+ ++M G + +++ L A R A +
Sbjct: 630 ITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHK 689
Query: 421 LPEDQKCTATYTALIGVYFSAGSAD 445
L + K + ++ + SA AD
Sbjct: 690 LADSGKLSQSFACPLLKPSSADEAD 714
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 84/155 (54%)
Query: 58 RSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDV 117
R+ G D FTY M+ FG + +FE M++ D VTY S+++ L GD+
Sbjct: 452 RANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDL 511
Query: 118 DGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVL 177
D A ++++M+ K P + +Y+ ++ +++V A ++ EM+ +G PN TY +L
Sbjct: 512 DEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNIL 571
Query: 178 MEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNIL 212
++ L R GK EA + + +++ G+ PD +IL
Sbjct: 572 LDCLERRGKTTEAHKFYETLKQQGLTPDSITYSIL 606
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 196/487 (40%), Gaps = 63/487 (12%)
Query: 22 DLLKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVS--RSRGFNHDRFTYTTMLDIFGEA 79
DL ++ + YT +++ H + W F R +G+ D F Y +L+ +A
Sbjct: 172 DLASKWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKA 231
Query: 80 KRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSY 139
+ VFE M++ + DA TYT ++ AG V++ EEM + C +++Y
Sbjct: 232 GMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAY 291
Query: 140 TAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQE 199
++ L N V EA + +MI+ PN +TY+++++ L G+ EI
Sbjct: 292 NTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSG 351
Query: 200 AGVQPDKAACNILIEKCCKAGE-TRTIILILRYMKENRLALRYPVFKEALQTFKVADEND 258
+P + LI+ CK+G + + R + RY F L+ A++
Sbjct: 352 CLNRP---VYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRY-AFVSMLEALCNAEKTT 407
Query: 259 SLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMD 318
+ +H PE + +TTD+ G+ ++ + S +S + D
Sbjct: 408 EAIDLLH--MMPE--------KGITTDV--------GMYNMIFSALGKLKQVSFMSSLYD 449
Query: 319 KSIQLDSAVISTIIEVNCDHRRRDGALL-AFEYSVKMDLNLERTAYLALIGILIKLNTFP 377
R +G + F Y++ +I ++
Sbjct: 450 T-------------------MRANGVVPDVFTYNI-------------MISSFGRVGLVD 477
Query: 378 KVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALI 435
K +E+ EEM V +I+ LG A +F + E TY+ LI
Sbjct: 478 KASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILI 537
Query: 436 GVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQAD 495
+ + D A ++ M +G P++ T+N+LL LE+ G+ ++A K ++++
Sbjct: 538 ECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAH---KFYETLKQQ 594
Query: 496 ALSKDAV 502
L+ D++
Sbjct: 595 GLTPDSI 601
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 203/501 (40%), Gaps = 42/501 (8%)
Query: 2 RDTISNVYKILKYSTWDSA----QDLLKNLPIKWDSYTVNQVLKT-HPPMEKAWLFFNWV 56
R I V +IL+ + D L++L + + ++V+K P A FF +
Sbjct: 48 RHLICAVARILRSPVSHTPLLDLDDYLRSLRLTLTTAEASEVMKALAPDTSLALSFFRFA 107
Query: 57 SRS-RGFNHDRFTYTTMLDIF--GEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSN 113
+ S GF HD F+Y +L + A +M+ + E M+ G+ + T ++
Sbjct: 108 ATSLPGFRHDAFSYNRILVLLFSNRADPAEAMRLIAE-MERDGVPGNISTVNLLVGMGVE 166
Query: 114 AGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYT 173
G + W ++L +Y ++ + V + +VY++M ++G + +
Sbjct: 167 VGRCLDLASKWG-LRLNG-----YTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFA 220
Query: 174 YTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMK 233
Y +L+ L +AG ++A ++F M++ PD ILI KAG+T + +L M
Sbjct: 221 YNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMV 280
Query: 234 ENRLALR---YPVFKEALQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPL 290
L Y EAL K+ DE A+ ++ IE
Sbjct: 281 SEGCVLNLIAYNTVIEALGKNKMVDE---------------------AIFMLSKMIESDC 319
Query: 291 SIDQGLVLILLKKKNLVAIDSLLSGIMD-KSIQLDSAVISTIIEVNCDHRRRDGALLAFE 349
+Q I+L + L+ I+D S L+ V S +I+ C A F
Sbjct: 320 RPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFC 379
Query: 350 YSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSAR 409
+R A+++++ L + +++ M + G + V + ++ LG +
Sbjct: 380 RMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLK 439
Query: 410 RPVPAAKIFSLLPEDQKC--TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFN 467
+ + ++ + + TY +I + G DKA ++++ M P + T+N
Sbjct: 440 QVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYN 499
Query: 468 VLLAGLEKLGRVSDAEIYRKE 488
++ L K G + +A + K+
Sbjct: 500 SMINCLGKNGDLDEAHMLFKD 520
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 195/480 (40%), Gaps = 31/480 (6%)
Query: 20 AQDLLKNLPI-----KWDSYTVNQVLKTHPPMEKAWLFFNWVSR--SRGFNHDRFTYTTM 72
+D+ KNL + WD + ++K + M + R GF T +
Sbjct: 215 GEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYL 274
Query: 73 LDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKEC 132
L+ + V+E M+ GI + T+ + H L GD E+M+ +
Sbjct: 275 LNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGF 334
Query: 133 YPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALE 192
P IV+Y + R+ +A +YK M +RG+ P+ +YT LM L + G+ EA +
Sbjct: 335 DPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQ 394
Query: 193 IFSKMQEAGVQPDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFK 252
+F +M G+ PD N LI CK G+ M+E+R L ++
Sbjct: 395 LFHRMVHRGLSPDIVTYNTLIHGYCKEGK----------MQESRSLLHDMIWN------- 437
Query: 253 VADENDSL-LWQVHPQFSPE--FISD-NDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVA 308
DS W + + E F+S N VE + I L++ L ++ A
Sbjct: 438 -GISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFA 496
Query: 309 IDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIG 368
+LL + + + + + +I+ C ALL V ++ Y A+JG
Sbjct: 497 AKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJG 556
Query: 369 ILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKC- 427
L +L+ + +V EM +G + + L + A + S ++ +
Sbjct: 557 CLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIH 616
Query: 428 -TATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYR 486
T ++ ALI + + G ++L+I M + G+ P+ T ++ GL K RV A + +
Sbjct: 617 DTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKARRVDSASLMK 676
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 179/492 (36%), Gaps = 86/492 (17%)
Query: 49 AWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS-SMKYVFELMQ-------------- 93
A FFNWV G Y ++ ++ S ++K++ EL++
Sbjct: 162 ALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKN 221
Query: 94 ----EKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLN 149
+ N D V + ++ G V + + M PT+++ + L
Sbjct: 222 LILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKL 281
Query: 150 DRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAAC 209
+ +VY+EM + G+ PN YT+ +L L + G + + KM+E G PD
Sbjct: 282 NYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTY 341
Query: 210 NILIEKCCKAGETRTIILILRYMKENRLA---LRYPVFKEAL-QTFKVADENDSLLWQVH 265
N LI C+ G + + M + + Y L + +V + + VH
Sbjct: 342 NTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVH 401
Query: 266 PQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDS 325
SP+ ++ N T I G K+ + SLL ++ I DS
Sbjct: 402 RGLSPDIVTYN-------TLIHG-----------YCKEGKMQESRSLLHDMIWNGISPDS 443
Query: 326 AVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEIVEE 385
++E ++G L+ LNL V E
Sbjct: 444 FTCWVLVE----GYGKEGKFLS-------ALNL------------------------VVE 468
Query: 386 MTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFSLLPED--QKCTATYTALIGVYFSAGS 443
+ + G S+ + + LI L RP A + + +D + Y LI +
Sbjct: 469 LQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDC 528
Query: 444 ADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAEIYRKEKKSIQADALSKDAVP 503
+AL + M K I P+L T+ +J L +L R + E S+ + ++ +P
Sbjct: 529 IAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGE-------SLVGEMVASGXLP 581
Query: 504 MEEKICDLLYGG 515
+ +IC L+ G
Sbjct: 582 -DLEICRALFYG 592
>gi|357119779|ref|XP_003561611.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Brachypodium distachyon]
Length = 547
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 128/274 (46%), Gaps = 9/274 (3%)
Query: 48 KAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSV 107
+A FN + + RG++ D TYTT++D + I + +++ M KG+ + Y S
Sbjct: 257 EALRVFNEI-KLRGYDIDAVTYTTVIDGLCKVGNIVDARKMWDEMVHKGMEPNEYAYCSF 315
Query: 108 MHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGL 167
+ + AGD D A ++ EM K + VS + ++ RV EA V++ M+ G+
Sbjct: 316 LGYYCKAGDFDMAYKVYGEMLGKGFKESTVSCNIILAGFCVHMRVDEAISVFEGMVTEGI 375
Query: 168 PPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCCKAGETRTIIL 227
+ +TY L++ L + G+ EA+ ++ ++ +G++P + LI+ C+ G+ +
Sbjct: 376 EHDVFTYNTLIQGLCKVGRLAEAIRMYQRLLSSGLEPTVSTFTPLIDTMCEEGQVDHAVE 435
Query: 228 ILRYMKENRLALRYPVFKEALQTF-KVADENDSLLW---QVHPQFSPEFISDNDAVEFVT 283
+ R M+ + F K +D++ W + P+ + N +E ++
Sbjct: 436 LFRLMQAKGFEPLVRSNDSVINGFCKARRADDAMAWLAGMLKSNLKPQKQTFNSLLELLS 495
Query: 284 TDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIM 317
T +D L+++ K+ +DSL I+
Sbjct: 496 TSER----VDDALLILNTMLKSGFGLDSLPCTIL 525
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
+ G HD FTY T++ + R++ +++ + G+ T+T ++ + G VD
Sbjct: 372 TEGIEHDVFTYNTLIQGLCKVGRLAEAIRMYQRLLSSGLEPTVSTFTPLIDTMCEEGQVD 431
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
AV ++ M+ K P + S + + R +A M++ L P T+ L+
Sbjct: 432 HAVELFRLMQAKGFEPLVRSNDSVINGFCKARRADDAMAWLAGMLKSNLKPQKQTFNSLL 491
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQPDKAACNILIEKCC 217
E L + + ++AL I + M ++G D C IL++K C
Sbjct: 492 ELLSTSERVDDALLILNTMLKSGFGLDSLPCTILVDKLC 530
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%)
Query: 134 PTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEI 193
P V Y + LF + EA V+ E+ RG + TYT +++ L + G +A ++
Sbjct: 237 PDTVVYQCIIHGLFAHKMGGEALRVFNEIKLRGYDIDAVTYTTVIDGLCKVGNIVDARKM 296
Query: 194 FSKMQEAGVQPDKAACNILIEKCCKAGE 221
+ +M G++P++ A + CKAG+
Sbjct: 297 WDEMVHKGMEPNEYAYCSFLGYYCKAGD 324
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/470 (20%), Positives = 186/470 (39%), Gaps = 24/470 (5%)
Query: 24 LKNLPIKWDSYTVNQVLKTHPPMEKAWLFFNWVSRSRGFNHDRFTYTTMLDIFGEAKRIS 83
++NL +D V VL E A FF WV RS F H+R T+ +++I G A +++
Sbjct: 3 IRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFQHNRETHLKIIEILGRASKLN 62
Query: 84 SMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVDGAVNIWEEMKLKECYPTIVSYTAYM 143
+ + M +KG+ D + ++ N G V +V ++++M TI SY A
Sbjct: 63 HARCILLDMPKKGLEWDEDMWVLMIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALF 122
Query: 144 KILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLMEYLVRAGKYEEALEIFSKMQEAGVQ 203
K++ R A + +M+ G+ P +T+ +++ +GK E A F M+ +
Sbjct: 123 KVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREIT 182
Query: 204 PDKAACNILIEKCCKAGETRTIILILRYMKENRLALRYPVFKEALQTFKVADENDSLLWQ 263
PD N +I + + MK + + ++ + D+ D L
Sbjct: 183 PDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRL 242
Query: 264 VHPQFSPEFISDNDAVEFVTTDIEGPLSIDQGLVLILLKKKNLVAIDSLLSGIMDKSIQ- 322
V + I N A+ + T L+ L + + S+L ++DK I
Sbjct: 243 VE-EMKGYGIKAN-AITYST------------LLPGLCNAEKMSEARSILKEMVDKYIAP 288
Query: 323 LDSAVISTIIEVNCDHRRRDGALLAFEYSVKMDLNLERTAYLALIGILIKLNTFPKVAEI 382
D+++ +I C D A + +++ + E Y LI K + + ++
Sbjct: 289 TDNSIFMRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKL 348
Query: 383 VEEMTKAG---------HSLGVYLGALLIHRLGSARRPVPAAKIFSLLPEDQKCTATYTA 433
++++ + H L+ + + + A + L+ +
Sbjct: 349 LDKLIEKDIILRPQSTLHMESSAYNPLIGYLCNNGQTAKAEALVRQLMKLGVQDPTALNT 408
Query: 434 LIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLGRVSDAE 483
LI + GS D A ++ K M R+ + ++ L+ K +DA+
Sbjct: 409 LIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKRSEPADAK 458
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 143/340 (42%), Gaps = 20/340 (5%)
Query: 59 SRGFNHDRFTYTTMLDIFGEAKRISSMKYVFELMQEKGINIDAVTYTSVMHWLSNAGDVD 118
S G R T+ M+ F + ++ + FE M+ + I D +TY ++++ ++
Sbjct: 143 SEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNTMINGYYRVKKME 202
Query: 119 GAVNIWEEMKLKECYPTIVSYTAYMKILFLNDRVKEATDVYKEMIQRGLPPNCYTYTVLM 178
A + EMK + PT+V+YT +K D+V +A + +EM G+ N TY+ L+
Sbjct: 203 EAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKANAITYSTLL 262
Query: 179 EYLVRAGKYEEALEIFSKMQEAGVQP-DKAACNILIEKCCKAGETRTIILILRYMKENRL 237
L A K EA I +M + + P D + LI CKAG +L+ M
Sbjct: 263 PGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDAAADVLKAM----- 317
Query: 238 ALRYPVFKEA------LQTFKVADENDSLLWQVHPQFSPEFISDNDAVEFVTTDIEGPLS 291
+R V EA ++ + A + D + + + I + + + P
Sbjct: 318 -IRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMESSAYNP-- 374
Query: 292 IDQGLVLILLKKKNLVAIDSLLSGIMDKSIQLDSAVISTIIEVNCDHRRRDGALLAFEYS 351
L+ L ++L+ +M +Q D ++T+I + D A +
Sbjct: 375 ----LIGYLCNNGQTAKAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIM 429
Query: 352 VKMDLNLERTAYLALIGILIKLNTFPKVAEIVEEMTKAGH 391
++ ++ E++AY +L+ +K + ++ M + H
Sbjct: 430 LRRKVDSEKSAYDSLVQSYLKRSEPADAKAALDSMIENDH 469
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 360 RTAYLALIGILIKLNTFPKVAEIVEEMTKAGHSLGVYLGALLIHRLGSARRPVPAAKIFS 419
R +L +I IL + + I+ +M K G + L+I G+ + K+F
Sbjct: 45 RETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGNGGIVQESVKLFQ 104
Query: 420 LLPE--DQKCTATYTALIGVYFSAGSADKALKIYKTMCRKGIHPSLGTFNVLLAGLEKLG 477
+ E ++ +Y AL V G A + + M +GI P+ TFN+++ G G
Sbjct: 105 KMDELGVERTIKSYDALFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSG 164
Query: 478 RVSDAEIYRKEKKS 491
+V A + ++ K+
Sbjct: 165 KVETANRFFEDMKN 178
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,831,959,505
Number of Sequences: 23463169
Number of extensions: 318434457
Number of successful extensions: 913350
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6114
Number of HSP's successfully gapped in prelim test: 4416
Number of HSP's that attempted gapping in prelim test: 781542
Number of HSP's gapped (non-prelim): 89181
length of query: 519
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 372
effective length of database: 8,910,109,524
effective search space: 3314560742928
effective search space used: 3314560742928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)