Your job contains 1 sequence.
>010058
MATSMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQALNNEKAPAPWINQLNAPLEEI
DPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI
DMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHL
SHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLY
DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFF
RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQ
VLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVP
GDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVAT
LMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYKN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010058
(519 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005518 - symbol:SHM1 "serine transhydroxymeth... 2154 4.1e-223 1
TAIR|locus:2148463 - symbol:SHM2 "serine hydroxymethyltra... 2145 3.7e-222 1
UNIPROTKB|F1SL74 - symbol:LOC100626911 "Serine hydroxymet... 1478 1.8e-151 1
UNIPROTKB|Q3SZ20 - symbol:SHMT2 "Serine hydroxymethyltran... 1470 1.2e-150 1
UNIPROTKB|P34897 - symbol:SHMT2 "Serine hydroxymethyltran... 1467 2.6e-150 1
RGD|1308582 - symbol:Shmt2 "serine hydroxymethyltransfera... 1456 3.8e-149 1
UNIPROTKB|P14519 - symbol:SHMT2 "Serine hydroxymethyltran... 1447 3.4e-148 1
UNIPROTKB|Q60V73 - symbol:mel-32 "Serine hydroxymethyltra... 1447 3.4e-148 1
POMBASE|SPAC18G6.04c - symbol:shm2 "serine hydroxymethylt... 1437 3.9e-147 1
CGD|CAL0003822 - symbol:SHM1 species:5476 "Candida albica... 1436 5.0e-147 1
UNIPROTKB|Q59PP7 - symbol:SHM1 "Putative uncharacterized ... 1436 5.0e-147 1
CGD|CAL0001464 - symbol:SHM2 species:5476 "Candida albica... 1432 1.3e-146 1
UNIPROTKB|O13426 - symbol:SHM2 "Serine hydroxymethyltrans... 1432 1.3e-146 1
ZFIN|ZDB-GENE-071213-1 - symbol:shmt2 "serine hydroxymeth... 1432 1.3e-146 1
WB|WBGene00003214 - symbol:mel-32 species:6239 "Caenorhab... 1421 1.9e-145 1
UNIPROTKB|P50432 - symbol:mel-32 "Serine hydroxymethyltra... 1421 1.9e-145 1
UNIPROTKB|G4MRB4 - symbol:MGG_13781 "Serine hydroxymethyl... 1418 4.0e-145 1
POMBASE|SPAC24C9.12c - symbol:SPAC24C9.12c "glycine hydro... 1417 5.1e-145 1
MGI|MGI:98299 - symbol:Shmt1 "serine hydroxymethyltransfe... 1412 1.7e-144 1
UNIPROTKB|E1BS67 - symbol:SHMT1 "Uncharacterized protein"... 1411 2.2e-144 1
TAIR|locus:2127806 - symbol:SHM3 "serine hydroxymethyltra... 1410 2.8e-144 1
UNIPROTKB|P34896 - symbol:SHMT1 "Serine hydroxymethyltran... 1409 3.6e-144 1
ASPGD|ASPL0000008876 - symbol:AN10745 species:162425 "Eme... 1403 1.6e-143 1
RGD|1312011 - symbol:Shmt1 "serine hydroxymethyltransfera... 1402 2.0e-143 1
UNIPROTKB|E2RIV3 - symbol:SHMT1 "Uncharacterized protein"... 1399 4.2e-143 1
UNIPROTKB|E2R4L7 - symbol:SHMT2 "Uncharacterized protein"... 1395 1.1e-142 1
ASPGD|ASPL0000040474 - symbol:AN3058 species:162425 "Emer... 1380 4.3e-141 1
UNIPROTKB|Q5E9P9 - symbol:SHMT1 "Serine hydroxymethyltran... 1380 4.3e-141 1
ZFIN|ZDB-GENE-040426-1558 - symbol:shmt1 "serine hydroxym... 1372 3.0e-140 1
SGD|S000004048 - symbol:SHM2 "Cytosolic serine hydroxymet... 1369 6.3e-140 1
UNIPROTKB|G4NDG3 - symbol:MGG_00923 "Serine hydroxymethyl... 1366 1.3e-139 1
FB|FBgn0029823 - symbol:CG3011 species:7227 "Drosophila m... 1364 2.1e-139 1
TAIR|locus:2129251 - symbol:SHM4 "serine hydroxymethyltra... 1319 1.2e-134 1
SGD|S000000467 - symbol:SHM1 "Mitochondrial serine hydrox... 1318 1.6e-134 1
DICTYBASE|DDB_G0277947 - symbol:shmt1 "serine hydroxymeth... 1295 4.4e-132 1
DICTYBASE|DDB_G0291652 - symbol:shmt2 "serine hydroxymeth... 1280 1.7e-130 1
TAIR|locus:2119545 - symbol:EDA36 "EMBRYO SAC DEVELOPMENT... 1257 4.6e-128 1
UNIPROTKB|A8MYA6 - symbol:SHMT1 "Serine hydroxymethyltran... 1215 1.3e-123 1
TAIR|locus:2035937 - symbol:SHM7 "serine hydroxymethyltra... 1156 2.3e-117 1
TAIR|locus:2030581 - symbol:SHM6 "serine hydroxymethyltra... 1120 1.5e-113 1
UNIPROTKB|B4DPM9 - symbol:SHMT1 "Serine hydroxymethyltran... 1056 9.2e-107 1
GENEDB_PFALCIPARUM|PFL1720w - symbol:PFL1720w "Serine hyd... 982 6.4e-99 1
UNIPROTKB|Q8I566 - symbol:PFL1720w "Serine hydroxymethylt... 982 6.4e-99 1
UNIPROTKB|B4DLV4 - symbol:SHMT2 "Serine hydroxymethyltran... 966 3.2e-97 1
UNIPROTKB|Q4KLG7 - symbol:Shmt1 "Serine hydroxymethyltran... 907 5.7e-91 1
UNIPROTKB|P0A825 - symbol:glyA species:83333 "Escherichia... 901 2.5e-90 1
TIGR_CMR|GSU_1607 - symbol:GSU_1607 "serine hydroxymethyl... 877 2.7e-90 2
UNIPROTKB|H0YIZ0 - symbol:SHMT2 "Serine hydroxymethyltran... 874 1.8e-87 1
UNIPROTKB|Q9KTG1 - symbol:glyA1 "Serine hydroxymethyltran... 857 1.1e-85 1
TIGR_CMR|VC_0941 - symbol:VC_0941 "serine hydroxymethyltr... 857 1.1e-85 1
TIGR_CMR|CPS_2477 - symbol:CPS_2477 "serine hydroxymethyl... 849 8.0e-85 1
TIGR_CMR|CHY_2557 - symbol:CHY_2557 "serine hydroxymethyl... 838 1.2e-83 1
TIGR_CMR|CPS_4031 - symbol:CPS_4031 "serine hydroxymethyl... 837 1.5e-83 1
TIGR_CMR|CPS_0728 - symbol:CPS_0728 "serine hydroxymethyl... 812 1.9e-83 2
TIGR_CMR|CJE_0451 - symbol:CJE_0451 "serine hydroxymethyl... 830 8.2e-83 1
UNIPROTKB|G3V2Y4 - symbol:SHMT2 "Serine hydroxymethyltran... 827 1.7e-82 1
TIGR_CMR|SPO_1572 - symbol:SPO_1572 "serine hydroxymethyl... 820 9.4e-82 1
TIGR_CMR|SPO_2940 - symbol:SPO_2940 "serine hydroxymethyl... 820 9.4e-82 1
TIGR_CMR|BA_5558 - symbol:BA_5558 "serine hydroxymethyltr... 796 1.5e-81 2
UNIPROTKB|O53441 - symbol:glyA1 "Serine hydroxymethyltran... 765 1.9e-81 2
UNIPROTKB|Q9KMP4 - symbol:glyA2 "Serine hydroxymethyltran... 804 4.7e-80 1
TIGR_CMR|VC_A0278 - symbol:VC_A0278 "serine hydroxymethyl... 804 4.7e-80 1
TIGR_CMR|APH_0154 - symbol:APH_0154 "serine hydroxymethyl... 791 1.1e-78 1
TIGR_CMR|ECH_0311 - symbol:ECH_0311 "serine hydroxymethyl... 791 1.1e-78 1
TIGR_CMR|DET_0436 - symbol:DET_0436 "Serine hydroxymethyl... 790 1.4e-78 1
UNIPROTKB|O53615 - symbol:glyA2 "Serine hydroxymethyltran... 755 7.3e-75 1
TIGR_CMR|NSE_0218 - symbol:NSE_0218 "serine hydroxymethyl... 742 1.7e-73 1
UNIPROTKB|G3V4W5 - symbol:SHMT2 "Serine hydroxymethyltran... 506 3.3e-63 2
UNIPROTKB|G3V5L0 - symbol:SHMT2 "Serine hydroxymethyltran... 636 3.0e-62 1
TIGR_CMR|SO_3471 - symbol:SO_3471 "serine hydroxymethyltr... 600 1.1e-60 2
TIGR_CMR|CBU_1419 - symbol:CBU_1419 "serine hydroxymethyl... 592 1.8e-60 2
TIGR_CMR|CPS_3844 - symbol:CPS_3844 "serine hydroxymethyl... 558 5.5e-54 1
UNIPROTKB|G3V540 - symbol:SHMT2 "Serine hydroxymethyltran... 506 1.8e-48 1
UNIPROTKB|I3LGT5 - symbol:I3LGT5 "Serine hydroxymethyltra... 487 1.8e-46 1
UNIPROTKB|J3KRZ5 - symbol:SHMT1 "Serine hydroxymethyltran... 472 7.1e-45 1
UNIPROTKB|G3V2W0 - symbol:SHMT2 "Serine hydroxymethyltran... 440 1.7e-41 1
UNIPROTKB|G3V4X0 - symbol:SHMT2 "Serine hydroxymethyltran... 435 5.9e-41 1
UNIPROTKB|G3V2E4 - symbol:SHMT2 "Serine hydroxymethyltran... 394 1.3e-36 1
UNIPROTKB|G3V4T0 - symbol:SHMT2 "Serine hydroxymethyltran... 394 1.3e-36 1
UNIPROTKB|G3V3Y8 - symbol:SHMT2 "Serine hydroxymethyltran... 383 1.9e-35 1
UNIPROTKB|G3V241 - symbol:SHMT2 "Serine hydroxymethyltran... 362 3.2e-33 1
TIGR_CMR|SPO_3529 - symbol:SPO_3529 "serine hydroxymethyl... 257 1.6e-19 1
UNIPROTKB|G3V2D2 - symbol:SHMT2 "Serine hydroxymethyltran... 149 1.1e-09 1
UNIPROTKB|J3KRK5 - symbol:SHMT1 "Serine hydroxymethyltran... 131 9.4e-08 1
TIGR_CMR|ECH_0333 - symbol:ECH_0333 "serine hydroxymethyl... 94 0.00091 1
>TAIR|locus:2005518 [details] [associations]
symbol:SHM1 "serine transhydroxymethyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;TAS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=IMP]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009626
"plant-type hypersensitive response" evidence=TAS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0046686 "response to cadmium
ion" evidence=IEP] [GO:0009409 "response to cold" evidence=IEP;RCA]
[GO:0010319 "stromule" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009853 "photorespiration" evidence=IMP]
[GO:0016020 "membrane" evidence=IDA] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009814 "defense response, incompatible
interaction" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005886
GO:GO:0005634 GO:GO:0046686 GO:GO:0009570 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161592 GO:GO:0008266 GO:GO:0005759 GO:GO:0048046
GO:GO:0009409 GO:GO:0009626 EMBL:AL035538 GO:GO:0009853
GO:GO:0009534 GO:GO:0022626 GO:GO:0010319 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 EMBL:AJ271726
EMBL:AY054254 EMBL:AY057645 EMBL:AY070726 EMBL:AF428388
EMBL:BT006353 IPI:IPI00525727 PIR:T05620 RefSeq:NP_195506.1
UniGene:At.21766 ProteinModelPortal:Q9SZJ5 SMR:Q9SZJ5 IntAct:Q9SZJ5
STRING:Q9SZJ5 PaxDb:Q9SZJ5 PRIDE:Q9SZJ5 ProMEX:Q9SZJ5
EnsemblPlants:AT4G37930.1 GeneID:829949 KEGG:ath:AT4G37930
TAIR:At4g37930 InParanoid:Q9SZJ5 PhylomeDB:Q9SZJ5
ProtClustDB:PLN03226 BioCyc:MetaCyc:AT4G37930-MONOMER
Genevestigator:Q9SZJ5 GermOnline:AT4G37930 Uniprot:Q9SZJ5
Length = 517
Score = 2154 (763.3 bits), Expect = 4.1e-223, P = 4.1e-223
Identities = 420/520 (80%), Positives = 462/520 (88%)
Query: 1 MATSMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQALNN-EKAPAPWINQLNAXXXX 59
MA +MAL RLSSS+ PI+ + S YMSSLP +A++ E++ W QLNA
Sbjct: 1 MAMAMALRRLSSSIDKPIRPLIRSTS---CYMSSLPSEAVDEKERSRVTWPKQLNAPLEE 57
Query: 60 XXXXXXXXXXXXKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 119
KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY
Sbjct: 58 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEY 117
Query: 120 IDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGH 179
IDMAE+LCQKRAL+AF+LDP KWGVNVQ LSGSPANF VYTALLKPHERIMALDLPHGGH
Sbjct: 118 IDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGH 177
Query: 180 LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARL 239
LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDY+Q+EKSA LFRPKLIVAGASAYARL
Sbjct: 178 LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARL 237
Query: 240 YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF 299
YDYARIRKVC+KQKAVMLADMAHISGLVAA VIPSPF+YADVVTTTTHKSLRGPRGAMIF
Sbjct: 238 YDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRGPRGAMIF 297
Query: 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE 359
FRKGVKEINKQG+EV+Y +EDKINQAVFPGLQGGPHNHTI+GLAVALKQ T EYKAYQE
Sbjct: 298 FRKGVKEINKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQE 357
Query: 360 QVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTV 419
QVLSNS+KFA++L+ERGY+LVSGGT+NHLVLVNL+ KGIDGSRVEKVLE+VHIA+NKNTV
Sbjct: 358 QVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTV 417
Query: 420 PGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVA 479
PGDVSAMVPGGIRMGTPALTSRGFVEEDF KVAE+FD AV +ALK+K + +GTKLKDFV+
Sbjct: 418 PGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVS 477
Query: 480 TLMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYKN 519
+ S +IQSEI+ LR +VEE+AK+FPT+GFEKETMKYKN
Sbjct: 478 AMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517
>TAIR|locus:2148463 [details] [associations]
symbol:SHM2 "serine hydroxymethyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine metabolic
process" evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
EMBL:CP002688 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008270 GO:GO:0050897
GO:GO:0005747 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:ERFRAIC HSSP:P07511
ProtClustDB:PLN03226 EMBL:BT001097 EMBL:BT001113 IPI:IPI00525834
RefSeq:NP_568488.2 RefSeq:NP_851081.1 UniGene:At.22652
ProteinModelPortal:Q8GRI1 STRING:Q8GRI1 PaxDb:Q8GRI1 PRIDE:Q8GRI1
EnsemblPlants:AT5G26780.2 EnsemblPlants:AT5G26780.3 GeneID:832736
KEGG:ath:AT5G26780 TAIR:At5g26780 InParanoid:Q8GRI1
PhylomeDB:Q8GRI1 Genevestigator:Q8GRI1 Uniprot:Q8GRI1
Length = 533
Score = 2145 (760.1 bits), Expect = 3.7e-222, P = 3.7e-222
Identities = 424/532 (79%), Positives = 465/532 (87%)
Query: 4 SMALGRLSSSVTNPIKRHLNHGSHYYVYMSSLPDQAL-NNEKAPAPWINQLNAXXXXXXX 62
++AL RLSSSV PI ++G +MSSL A+ +EK+ + WI QLNA
Sbjct: 2 ALALRRLSSSVKKPISLLSSNGGSLR-FMSSLSTAAMAESEKSRSSWIKQLNASLDEIDP 60
Query: 63 XXXXXXXXXKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 122
KARQWKG ELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61 EVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120
Query: 123 AESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSH 182
AE+LCQKRAL+AFQLDP+KWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSH
Sbjct: 121 AETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSH 180
Query: 183 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDY 242
GYQTDTKKISAVSIFFETMPYRLDE+TGYIDY+QLEKSA LFRPKLIVAGASAYARLYDY
Sbjct: 181 GYQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDY 240
Query: 243 ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 302
ARIRKVC+KQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK
Sbjct: 241 ARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 300
Query: 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362
G+KEINKQG+EVMY YED+INQAVFPGLQGGPHNHTI+GLAVALKQ +TPEYKAYQ+QVL
Sbjct: 301 GLKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVL 360
Query: 363 SNSSKFA----------------RSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKV 406
N SKFA ++LL +GYDLVSGGT+NHLVLVNL+NKGIDGSRVEKV
Sbjct: 361 RNCSKFAELDIRPTVIISYGLSMQTLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKV 420
Query: 407 LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIK 466
LE VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVAE+FD AVK+ALKIK
Sbjct: 421 LELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIK 480
Query: 467 GDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYK 518
+++GTKLKDFVAT+ S+E +QSE+S LR+ VEEYAK+FPT+GFEKETM+YK
Sbjct: 481 AESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTIGFEKETMRYK 532
>UNIPROTKB|F1SL74 [details] [associations]
symbol:LOC100626911 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:CU633428 EMBL:FP340566
Ensembl:ENSSSCT00000023184 Ensembl:ENSSSCT00000023666
Uniprot:F1SL74
Length = 504
Score = 1478 (525.3 bits), Expect = 1.8e-151, P = 1.8e-151
Identities = 283/442 (64%), Positives = 348/442 (78%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 64 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 123
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDPA+WGVNVQ SGSPAN YTALL+PH+RIM LDLP GGHL+HGY TD K+I
Sbjct: 124 LEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMTDVKRI 183
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SIFFE+MPY+L+ TG IDY+QL +A LFRP+LI+AG SAYARL DYAR+R+VCD+
Sbjct: 184 SATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDE 243
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQ 310
KA +LADMAHISGLVAA VIPSPFE+ADVVTTTTHK+LRG R +IF+RKGV+ ++ K
Sbjct: 244 VKAHLLADMAHISGLVAAKVIPSPFEHADVVTTTTHKTLRGARSGLIFYRKGVRTVDPKT 303
Query: 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
G+E+ Y +ED+IN AVFP LQGGPHNH I+ +AVALKQ TP ++ Y QVL N+ A
Sbjct: 304 GREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMAD 363
Query: 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430
+LLERGY LVSGGT+NHLVLV+LR KG+DG+RVE+VLE V I ANKNT PGD SA+ PGG
Sbjct: 364 ALLERGYSLVSGGTDNHLVLVDLRPKGLDGARVERVLELVSITANKNTCPGDRSAITPGG 423
Query: 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSE 490
+R+GTPALTSR F E+DF KV F D V + L++K T TKL+DF + L+ D
Sbjct: 424 LRLGTPALTSRQFREDDFRKVVAFIDEGVSIGLEVKSKT--TKLQDFKSFLLKDPETCRR 481
Query: 491 ISNLRDKVEEYAKRFPTVGFEK 512
+++LR +VE++A+ FP GFE+
Sbjct: 482 LADLRQRVEQFARAFPMPGFEE 503
>UNIPROTKB|Q3SZ20 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9913 "Bos taurus" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743 GO:GO:0003682
GO:GO:0042645 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 EMBL:BC103242
IPI:IPI00718654 RefSeq:NP_001029454.1 UniGene:Bt.49106
ProteinModelPortal:Q3SZ20 SMR:Q3SZ20 STRING:Q3SZ20 PRIDE:Q3SZ20
Ensembl:ENSBTAT00000038244 GeneID:507197 KEGG:bta:507197 CTD:6472
InParanoid:Q3SZ20 OrthoDB:EOG4G4GQ7 NextBio:20867950 Uniprot:Q3SZ20
Length = 504
Score = 1470 (522.5 bits), Expect = 1.2e-150, P = 1.2e-150
Identities = 276/441 (62%), Positives = 348/441 (78%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 64 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 123
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDPA+WGVNVQ SGSPAN YTALL+PH+RIM LDLP GGHL+HGY +D K+I
Sbjct: 124 LEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRI 183
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SIFFE+MPY+L+ TG IDY+QL +A LF+P+LI+AG SAYARL DYAR+R+VCD+
Sbjct: 184 SATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPRLIIAGTSAYARLIDYARMREVCDE 243
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQ 310
KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +IF+RKGV+ ++ K
Sbjct: 244 VKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVQAVDPKT 303
Query: 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
G+E+ Y +ED+IN AVFP LQGGPHNH I+ +AVALKQ TP ++ Y Q+L N+ A
Sbjct: 304 GREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQILKNAQAMAN 363
Query: 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430
+LLERGY LVSGGT+NHLVLV+LR KG+DG+R E+VLE V I ANKNT PGD SA+ PGG
Sbjct: 364 ALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGG 423
Query: 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSE 490
+R+G PALTSRGF+E+DF KV F D V + L++K T TKL+DF + L+ D +
Sbjct: 424 LRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKSKT--TKLQDFKSFLLKDPETSHQ 481
Query: 491 ISNLRDKVEEYAKRFPTVGFE 511
+++LR +VE++A+ FP GF+
Sbjct: 482 LADLRQRVEQFARAFPMPGFD 502
>UNIPROTKB|P34897 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005758 "mitochondrial intermembrane
space" evidence=IEA] [GO:0006564 "L-serine biosynthetic process"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008732 "L-allo-threonine aldolase
activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IDA]
[GO:0006730 "one-carbon metabolic process" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0008284
EMBL:CH471054 DrugBank:DB00114 GO:GO:0003682 GO:GO:0016597
GO:GO:0051289 GO:GO:0042645 DrugBank:DB00145 DrugBank:DB00116
GO:GO:0008168 GO:GO:0006730 GO:GO:0035999 GO:GO:0006564
GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
HOVERGEN:HBG002807 CTD:6472 EMBL:AK315916 EMBL:BT006866
EMBL:AC137834 EMBL:BC011911 EMBL:BC013677 EMBL:BC032584
EMBL:BC044211 EMBL:Y12331 EMBL:U23143 EMBL:L11932 IPI:IPI00002520
IPI:IPI00795816 PIR:B46746 RefSeq:NP_001159828.1
RefSeq:NP_001159829.1 RefSeq:NP_001159830.1 RefSeq:NP_001159831.1
RefSeq:NP_005403.2 UniGene:Hs.741179 PDB:3OU5 PDBsum:3OU5
ProteinModelPortal:P34897 SMR:P34897 IntAct:P34897 STRING:P34897
PhosphoSite:P34897 DMDM:6226865 PaxDb:P34897 PRIDE:P34897
DNASU:6472 Ensembl:ENST00000328923 Ensembl:ENST00000414700
Ensembl:ENST00000449049 Ensembl:ENST00000553474
Ensembl:ENST00000557487 GeneID:6472 KEGG:hsa:6472 UCSC:uc001snf.2
GeneCards:GC12P057623 HGNC:HGNC:10852 HPA:HPA020543 HPA:HPA020549
MIM:138450 neXtProt:NX_P34897 PharmGKB:PA35755 InParanoid:P34897
PhylomeDB:P34897 BioCyc:MetaCyc:HS00049-MONOMER ChiTaRS:SHMT2
EvolutionaryTrace:P34897 GenomeRNAi:6472 NextBio:25141
ArrayExpress:P34897 Bgee:P34897 CleanEx:HS_SHMT2
Genevestigator:P34897 GermOnline:ENSG00000182199 Uniprot:P34897
Length = 504
Score = 1467 (521.5 bits), Expect = 2.6e-150, P = 2.6e-150
Identities = 278/442 (62%), Positives = 346/442 (78%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 64 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 123
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM LDLP GGHL+HGY +D K+I
Sbjct: 124 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRI 183
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SIFFE+MPY+L+ TG IDY QL +A LFRP+LI+AG SAYARL DYAR+R+VCD+
Sbjct: 184 SATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDE 243
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQ 310
KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +IF+RKGVK ++ K
Sbjct: 244 VKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKT 303
Query: 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
G+E+ Y +ED+IN AVFP LQGGPHNH I+ +AVALKQ TP ++ Y QVL N+ A
Sbjct: 304 GREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMAD 363
Query: 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430
+LLERGY LVSGGT+NHLVLV+LR KG+DG+R E+VLE V I ANKNT PGD SA+ PGG
Sbjct: 364 ALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGG 423
Query: 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSE 490
+R+G PALTSR F E+DF +V +F D V + L++K T KL+DF + L+ D
Sbjct: 424 LRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKT--AKLQDFKSFLLKDSETSQR 481
Query: 491 ISNLRDKVEEYAKRFPTVGFEK 512
++NLR +VE++A+ FP GF++
Sbjct: 482 LANLRQRVEQFARAFPMPGFDE 503
>RGD|1308582 [details] [associations]
symbol:Shmt2 "serine hydroxymethyltransferase 2 (mitochondrial)"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO;IDA;TAS] [GO:0005739 "mitochondrion"
evidence=ISO;IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO;IDA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISO;IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA;TAS]
[GO:0006545 "glycine biosynthetic process" evidence=IDA]
[GO:0006563 "L-serine metabolic process" evidence=TAS] [GO:0006564
"L-serine biosynthetic process" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=ISO] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IDA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016597 "amino
acid binding" evidence=IPI] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 RGD:1308582
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743
GO:GO:0005758 GO:GO:0005759 GO:GO:0008284 GO:GO:0003682
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0042645
GO:GO:0008168 GO:GO:0035999 GO:GO:0006564 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 CTD:6472
OrthoDB:EOG4G4GQ7 EMBL:BC085331 IPI:IPI00195109
RefSeq:NP_001008323.1 UniGene:Rn.9214 SMR:Q5U3Z7 IntAct:Q5U3Z7
STRING:Q5U3Z7 Ensembl:ENSRNOT00000011082 GeneID:299857
KEGG:rno:299857 InParanoid:Q5U3Z7 NextBio:645904
Genevestigator:Q5U3Z7 Uniprot:Q5U3Z7
Length = 504
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 276/442 (62%), Positives = 345/442 (78%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 64 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 123
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDPA+WGVNVQ SGSPAN YTALL+PH+RIM LDLP GGHL+HGY +D K+I
Sbjct: 124 LEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRI 183
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SIFFE+MPY+L+ TG IDY+QL +A LFRP+LI+AG SAYARL DYAR+R+VCD+
Sbjct: 184 SATSIFFESMPYKLNPQTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDE 243
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQ 310
KA +LADMAHISGLVAA VIPSPF+YAD+VTTTTHK+LRG R +IF+RKGV+ ++ K
Sbjct: 244 VKAHLLADMAHISGLVAAKVIPSPFKYADIVTTTTHKTLRGARSGLIFYRKGVRTVDPKT 303
Query: 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
GQE+ Y +ED+IN AVFP LQGGPHNH I+ +AVALKQ TP ++ Y QVL N+ A
Sbjct: 304 GQEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLRNAQAMAD 363
Query: 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430
+LL+RGY LVSGGT+ HLVLV+LR KG+DG+R E+VLE V I ANKNT PGD SA+ PGG
Sbjct: 364 ALLKRGYSLVSGGTDTHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGG 423
Query: 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSE 490
+R+G PALTSR F E+DF +V +F D V + L++K T KL+DF + L+ D
Sbjct: 424 LRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKT--AKLQDFKSFLLKDPETSQR 481
Query: 491 ISNLRDKVEEYAKRFPTVGFEK 512
++NLR +VE++A+ FP GF++
Sbjct: 482 LANLRQQVEQFARGFPMPGFDE 503
>UNIPROTKB|P14519 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9986 "Oryctolagus cuniculus" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0005743 GO:GO:0003682 GO:GO:0042645 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807 CTD:6472
EMBL:X91902 RefSeq:NP_001075874.1 UniGene:Ocu.3292
ProteinModelPortal:P14519 SMR:P14519 STRING:P14519 PRIDE:P14519
GeneID:100009293 Uniprot:P14519
Length = 504
Score = 1447 (514.4 bits), Expect = 3.4e-148, P = 3.4e-148
Identities = 275/440 (62%), Positives = 343/440 (77%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 64 KDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 123
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDPA+WGVNVQ SGSPAN YTALL+PH+RIM LDLP GGHL+HGY +D K++
Sbjct: 124 LEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRV 183
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SIFFE+MPY+L+ TG IDYEQL +A LFRP+LI+AG SAYARL DYAR+R+VCD+
Sbjct: 184 SATSIFFESMPYKLNPQTGLIDYEQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDE 243
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQ 310
KA +LADMAHISGLVAA VIPSPF++ADVVTTTTHK+LRG R +IF+RKGV+ ++ K
Sbjct: 244 VKAHLLADMAHISGLVAAKVIPSPFKHADVVTTTTHKTLRGARSGLIFYRKGVRTVDPKT 303
Query: 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
GQE+ Y +ED+IN AVFP LQGGPHNH I+ +AVALKQ TP ++ Y QVL N+ A
Sbjct: 304 GQEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMAD 363
Query: 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430
+LLERGY LVSGGT+NHLVLV+LR KG+DG+R E+VLE V I ANKNT PGD SA+ PGG
Sbjct: 364 ALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGG 423
Query: 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSE 490
+R+G PALTSR F E+DF +V +F D V + L++K T KL+DF + L+ D
Sbjct: 424 LRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKT--AKLQDFKSFLLKDPETSQH 481
Query: 491 ISNLRDKVEEYAKRFPTVGF 510
+++LR +V+++A+ FP GF
Sbjct: 482 LADLRRRVQQFARAFPMPGF 501
>UNIPROTKB|Q60V73 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6238 "Caenorhabditis briggsae" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0009069 "serine family amino
acid metabolic process" evidence=TAS] [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:HE600934 HSSP:P07511
ProteinModelPortal:Q60V73 STRING:Q60V73 PRIDE:Q60V73
EnsemblMetazoa:CBG19673 WormBase:CBG19673 GO:GO:0009069
Uniprot:Q60V73
Length = 511
Score = 1447 (514.4 bits), Expect = 3.4e-148, P = 3.4e-148
Identities = 272/438 (62%), Positives = 341/438 (77%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K+RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGGNE+ID E LCQKRA
Sbjct: 71 KSRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMEILCQKRA 130
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+ F LDPAKWGVNVQSLSGSPANF VYTAL+ + RIM LDLP GGHL+HG+ T +K+
Sbjct: 131 LEVFGLDPAKWGVNVQSLSGSPANFAVYTALVGANGRIMGLDLPDGGHLTHGFFTPARKV 190
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA S FF++MPY++D +G IDY++LE++A LFRPK+++AG S YAR DY R RK+ K
Sbjct: 191 SATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPKVLIAGVSCYARHLDYERFRKIATK 250
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGAMIF+RKGV+ +N +G
Sbjct: 251 AGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGAMIFYRKGVRSVNAKG 310
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
E +Y E+KIN AVFPGLQGGPHNHTI+G+AVALKQ + ++ Y EQ+L N+ A
Sbjct: 311 VETLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALKQCLSEDFVQYGEQILKNAKTLAER 370
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
L + GY L +GGT+NHL+LV+LR G++G+R E +L+ HIA NKNT PGDVSA+ PGGI
Sbjct: 371 LKKHGYSLATGGTDNHLLLVDLRPIGVEGARAEHILDLAHIACNKNTCPGDVSALRPGGI 430
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEI 491
R+GTPALTSRGF E+DFEKV +F V++A K + G LKDF A ++E + E+
Sbjct: 431 RLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKAFTATNEQFKQEV 489
Query: 492 SNLRDKVEEYAKRFPTVG 509
+ L +VEE++ +F G
Sbjct: 490 AELAKRVEEFSGKFEIPG 507
>POMBASE|SPAC18G6.04c [details] [associations]
symbol:shm2 "serine hydroxymethyltransferase Shm2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IC] [GO:0009070 "serine family amino acid biosynthetic
process" evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC18G6.04c
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 PIR:T37918 RefSeq:NP_593668.2 STRING:Q10104
EnsemblFungi:SPAC18G6.04c.1 GeneID:2542242 OrthoDB:EOG4V1B88
NextBio:20803308 GO:GO:0009070 Uniprot:Q10104
Length = 488
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 278/437 (63%), Positives = 341/437 (78%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K+RQ + + LI SENFTS +VM A+GS+M NKYSEGYPGARYYGGNE+ID AE LCQ RA
Sbjct: 49 KSRQKESIALIASENFTSRAVMDALGSIMQNKYSEGYPGARYYGGNEFIDQAERLCQTRA 108
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LD KWGVNVQ SGSPAN Q Y A++KPH+R+M LDLPHGGHLSHG+ T K I
Sbjct: 109 LEAFHLDGEKWGVNVQPHSGSPANLQAYQAVMKPHDRLMGLDLPHGGHLSHGFSTPQKAI 168
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SAVS +F TMPY +++ TG IDY+ LEK+A FRPK+IVAGASAYARL DY R+RK+ +
Sbjct: 169 SAVSTYFSTMPYNVNKETGIIDYDSLEKAAIQFRPKVIVAGASAYARLVDYKRMRKITEM 228
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A +L DMAHISGLVAAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIF+RKG + +K+G
Sbjct: 229 CNAYLLCDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFYRKGTRSHDKRG 288
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
++Y EDKIN +VFPG QGGPHNHTI+ LAVAL Q KTPE+ YQ+ VLSN+ A +
Sbjct: 289 NPILYELEDKINFSVFPGHQGGPHNHTITALAVALGQAKTPEFYQYQKDVLSNAKAMANA 348
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
+ RGY LVSGGT+ HLVLV+L +KG+DG+RVE++LE V+I+ANKNTVPGD SA++P G+
Sbjct: 349 FITRGYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGL 408
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDT--KG-TKLKDFVATLMSDESIQ 488
R+GTPA T+RGF E+DFE+V E D V L KI +G +K +DF A + D S
Sbjct: 409 RLGTPACTTRGFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDFKA-YVGDGSKF 467
Query: 489 SEISNLRDKVEEYAKRF 505
SEI+ L+ +V +A +F
Sbjct: 468 SEIAKLKKEVITWAGKF 484
>CGD|CAL0003822 [details] [associations]
symbol:SHM1 species:5476 "Candida albicans" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006544 "glycine metabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IEA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 1436 (510.6 bits), Expect = 5.0e-147, P = 5.0e-147
Identities = 271/440 (61%), Positives = 348/440 (79%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
+ RQ + LIPSENFTS +VM +GS M NKYSEGYPG RYYGGNE ID AE+LCQKRA
Sbjct: 54 RTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNEIIDKAEALCQKRA 113
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDP++WGVNVQ LSG+PAN Y+A+L+ +RIM LDLPHGGHLSHGYQT+T KI
Sbjct: 114 LEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIMGLDLPHGGHLSHGYQTNTTKI 173
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
S +S +F+TMPYRL+E TG IDY+ LEK+A LFRPK+IVAGASAY+R+ DY R+R++ DK
Sbjct: 174 SYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVAGASAYSRVIDYKRMRQIADK 233
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A +L+DMAHISGLV+AGV SPF Y+D+VTTTTHKSLRGPRGAMIFFRKG++++ K+G
Sbjct: 234 VGAYLLSDMAHISGLVSAGVTDSPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRKVTKKG 293
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+E+ Y E KIN +VFPG QGGPHNHTIS LAVALKQ PEY YQ++V+SN+ FA +
Sbjct: 294 KEIPYELERKINFSVFPGHQGGPHNHTISALAVALKQCTEPEYVKYQQEVVSNAKHFADA 353
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
L+ +G+ LVS GT+ HL+LV+LR++ IDG+RVE VLE +IA NKNTVPGDVSA+ P G+
Sbjct: 354 LVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIATNKNTVPGDVSALFPSGL 413
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATL--MSDESIQS 489
R+GTPA+T+RGF E+F+KVAEF D AV +A+++K +G K+ +A+ ++DES
Sbjct: 414 RVGTPAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADES--D 471
Query: 490 EISNLRDKVEEYAKRFPTVG 509
++ L +V + ++P G
Sbjct: 472 KVKQLDKEVVSWVSKYPVPG 491
>UNIPROTKB|Q59PP7 [details] [associations]
symbol:SHM1 "Putative uncharacterized protein SHM1"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006544 "glycine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 1436 (510.6 bits), Expect = 5.0e-147, P = 5.0e-147
Identities = 271/440 (61%), Positives = 348/440 (79%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
+ RQ + LIPSENFTS +VM +GS M NKYSEGYPG RYYGGNE ID AE+LCQKRA
Sbjct: 54 RTRQKNSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNEIIDKAEALCQKRA 113
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDP++WGVNVQ LSG+PAN Y+A+L+ +RIM LDLPHGGHLSHGYQT+T KI
Sbjct: 114 LEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIMGLDLPHGGHLSHGYQTNTTKI 173
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
S +S +F+TMPYRL+E TG IDY+ LEK+A LFRPK+IVAGASAY+R+ DY R+R++ DK
Sbjct: 174 SYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVAGASAYSRVIDYKRMRQIADK 233
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A +L+DMAHISGLV+AGV SPF Y+D+VTTTTHKSLRGPRGAMIFFRKG++++ K+G
Sbjct: 234 VGAYLLSDMAHISGLVSAGVTDSPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRKVTKKG 293
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+E+ Y E KIN +VFPG QGGPHNHTIS LAVALKQ PEY YQ++V+SN+ FA +
Sbjct: 294 KEIPYELERKINFSVFPGHQGGPHNHTISALAVALKQCTEPEYVKYQQEVVSNAKHFADA 353
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
L+ +G+ LVS GT+ HL+LV+LR++ IDG+RVE VLE +IA NKNTVPGDVSA+ P G+
Sbjct: 354 LVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIATNKNTVPGDVSALFPSGL 413
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATL--MSDESIQS 489
R+GTPA+T+RGF E+F+KVAEF D AV +A+++K +G K+ +A+ ++DES
Sbjct: 414 RVGTPAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADES--D 471
Query: 490 EISNLRDKVEEYAKRFPTVG 509
++ L +V + ++P G
Sbjct: 472 KVKQLDKEVVSWVSKYPVPG 491
>CGD|CAL0001464 [details] [associations]
symbol:SHM2 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] [GO:0043332 "mating projection
tip" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 1432 (509.1 bits), Expect = 1.3e-146, P = 1.3e-146
Identities = 269/436 (61%), Positives = 338/436 (77%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + LI SENFT+ +V A+G+ M NKYSEGYPGARYYGGNE+ID E LCQ+RAL
Sbjct: 35 RQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGGNEHIDRMELLCQERALK 94
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
AF L P KWGVNVQ+LSGSPAN QVY A++KPHER+M LDLPHGGHLSHGYQTD++KISA
Sbjct: 95 AFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPHGGHLSHGYQTDSRKISA 154
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
VS +FETMPYR+D TG IDY+ LEK+A L+RPK++VAG SAY RL DY R+R++ DK
Sbjct: 155 VSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAYCRLIDYKRMREIADKVG 214
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIFFR+GV+ +N K GQ
Sbjct: 215 AYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSVNPKTGQ 274
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E++Y E+ IN +VFPG QGGPHNHTI+ LA ALKQ TPE+K YQEQVL N+
Sbjct: 275 EILYDLENPINFSVFPGHQGGPHNHTIAALATALKQANTPEFKEYQEQVLKNAKALESEF 334
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
++GY LVS GT++H+VLV+L++K IDG+RVE V E ++IA NKN++PGD SA+VPGG+R
Sbjct: 335 TKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVR 394
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTK--GTKLKDFVATLMSDESIQSE 490
+G PA+T+RG EEDF+K+ + D AV A +++ KLKDF + D +
Sbjct: 395 IGAPAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDFKNAVSGDSE---K 451
Query: 491 ISNLRDKVEEYAKRFP 506
+ +RD++ ++A FP
Sbjct: 452 LKAVRDEIYQWAGSFP 467
>UNIPROTKB|O13426 [details] [associations]
symbol:SHM2 "Serine hydroxymethyltransferase, cytosolic"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006544 "glycine metabolic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 1432 (509.1 bits), Expect = 1.3e-146, P = 1.3e-146
Identities = 269/436 (61%), Positives = 338/436 (77%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + LI SENFT+ +V A+G+ M NKYSEGYPGARYYGGNE+ID E LCQ+RAL
Sbjct: 35 RQQHSIVLIASENFTTTAVFDALGTPMCNKYSEGYPGARYYGGNEHIDRMELLCQERALK 94
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
AF L P KWGVNVQ+LSGSPAN QVY A++KPHER+M LDLPHGGHLSHGYQTD++KISA
Sbjct: 95 AFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLDLPHGGHLSHGYQTDSRKISA 154
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
VS +FETMPYR+D TG IDY+ LEK+A L+RPK++VAG SAY RL DY R+R++ DK
Sbjct: 155 VSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAYCRLIDYKRMREIADKVG 214
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIFFR+GV+ +N K GQ
Sbjct: 215 AYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSVNPKTGQ 274
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E++Y E+ IN +VFPG QGGPHNHTI+ LA ALKQ TPE+K YQEQVL N+
Sbjct: 275 EILYDLENPINFSVFPGHQGGPHNHTIAALATALKQANTPEFKEYQEQVLKNAKALESEF 334
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
++GY LVS GT++H+VLV+L++K IDG+RVE V E ++IA NKN++PGD SA+VPGG+R
Sbjct: 335 TKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVR 394
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTK--GTKLKDFVATLMSDESIQSE 490
+G PA+T+RG EEDF+K+ + D AV A +++ KLKDF + D +
Sbjct: 395 IGAPAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDFKNAVSGDSE---K 451
Query: 491 ISNLRDKVEEYAKRFP 506
+ +RD++ ++A FP
Sbjct: 452 LKAVRDEIYQWAGSFP 467
>ZFIN|ZDB-GENE-071213-1 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2
(mitochondrial)" species:7955 "Danio rerio" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA;IDA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 ZFIN:ZDB-GENE-071213-1 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
HOVERGEN:HBG002807 CTD:6472 EMBL:CABZ01098501 EMBL:CABZ01112226
EMBL:CABZ01112227 EMBL:CABZ01112228 EMBL:CABZ01112229
EMBL:CABZ01112230 EMBL:EF213101 IPI:IPI00862356
RefSeq:NP_001116846.1 UniGene:Dr.128606 SMR:A9LDD9 STRING:A9LDD9
Ensembl:ENSDART00000111064 GeneID:100144628 KEGG:dre:100144628
NextBio:20791462 Uniprot:A9LDD9
Length = 492
Score = 1432 (509.1 bits), Expect = 1.3e-146, P = 1.3e-146
Identities = 271/439 (61%), Positives = 337/439 (76%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A GS + NKYSEGYPG RYYGG E +D E LCQKRA
Sbjct: 53 KDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKRA 112
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDP WGVNVQ SGSPANF YTA+L PHERIM LDLP GGHL+HGY +D ++I
Sbjct: 113 LEAFDLDPQLWGVNVQPYSGSPANFAAYTAVLNPHERIMGLDLPDGGHLTHGYMSDVRRI 172
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SI+FE+MPY+L+ TG IDY+Q+E +A LFRPKLI+AG SAYARL DY RI+ +C +
Sbjct: 173 SATSIYFESMPYKLNPKTGLIDYDQMELTAKLFRPKLIIAGTSAYARLIDYCRIKTLCSE 232
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A MLADMAHISGLVAA IPSPF++AD+VTTTTHKSLRG R +IF+RKGV+ ++K+G
Sbjct: 233 INAYMLADMAHISGLVAAKAIPSPFQHADIVTTTTHKSLRGSRAGLIFYRKGVRSVDKKG 292
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+E+MY E+K+N +VFP LQGGPHNH I+G+AVALKQ +P ++ Y QVL NS A +
Sbjct: 293 KEIMYDLEEKVNFSVFPSLQGGPHNHAIAGVAVALKQATSPMFREYIAQVLKNSKAMAAA 352
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
LL++GY LVSGGT+NHLVLV+LR +G+DG+R E+VLE V I ANKNT PGD SA+ PGG+
Sbjct: 353 LLDKGYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELVSITANKNTCPGDKSALTPGGL 412
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEI 491
R+GTPALTSR E DF+KV EF +++ +K TK KL DF + L+ D S I
Sbjct: 413 RLGTPALTSRQLKECDFQKVVEFIHQGIQIGQDVKKKTK--KLSDFKSFLLEDAETVSRI 470
Query: 492 SNLRDKVEEYAKRFPTVGF 510
++LR +VE +A+ FP GF
Sbjct: 471 ADLRSRVEAFARPFPMPGF 489
>WB|WBGene00003214 [details] [associations]
symbol:mel-32 species:6239 "Caenorhabditis elegans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
Identities = 268/440 (60%), Positives = 340/440 (77%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGGNE+ID E LCQKRA
Sbjct: 67 KKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMELLCQKRA 126
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+ F LDPAKWGVNVQ LSGSPANF VYTA++ + RIM LDLP GGHL+HG+ T +K+
Sbjct: 127 LEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPDGGHLTHGFFTPARKV 186
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA S FF+++PY++D +TG IDY++LE++A LFRPK I+AG S YAR DY R RK+ K
Sbjct: 187 SATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIATK 246
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGA+IF+RKGV+ N +G
Sbjct: 247 AGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGALIFYRKGVRSTNAKG 306
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+ +Y E+KIN AVFPGLQGGPHNHTI+G+AVAL+Q + ++ Y EQVL N+ A
Sbjct: 307 VDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQYGEQVLKNAKTLAER 366
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
+ + GY L +GGT+NHL+LV+LR G++G+R E VL+ HIA NKNT PGDVSA+ PGGI
Sbjct: 367 MKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGI 426
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEI 491
R+GTPALTSRGF E+DFEKV +F V++A K + G LKDF + ++E + ++
Sbjct: 427 RLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKSFTETNEPFKKDV 485
Query: 492 SNLRDKVEEYAKRFPTVGFE 511
++L +VEE++ +F G E
Sbjct: 486 ADLAKRVEEFSTKFEIPGNE 505
>UNIPROTKB|P50432 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6239 "Caenorhabditis elegans" [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] [GO:0009790 "embryo development"
evidence=IMP] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=TAS] [GO:0009069 "serine family amino acid
metabolic process" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
Identities = 268/440 (60%), Positives = 340/440 (77%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENFTS +VM A+GS M NKYSEGYPGARYYGGNE+ID E LCQKRA
Sbjct: 67 KKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGARYYGGNEFIDQMELLCQKRA 126
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+ F LDPAKWGVNVQ LSGSPANF VYTA++ + RIM LDLP GGHL+HG+ T +K+
Sbjct: 127 LEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPDGGHLTHGFFTPARKV 186
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA S FF+++PY++D +TG IDY++LE++A LFRPK I+AG S YAR DY R RK+ K
Sbjct: 187 SATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIATK 246
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A +++DMAHISGLVAAG+IPSPFEY+DVVTTTTHKSLRGPRGA+IF+RKGV+ N +G
Sbjct: 247 AGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGALIFYRKGVRSTNAKG 306
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+ +Y E+KIN AVFPGLQGGPHNHTI+G+AVAL+Q + ++ Y EQVL N+ A
Sbjct: 307 VDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQYGEQVLKNAKTLAER 366
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
+ + GY L +GGT+NHL+LV+LR G++G+R E VL+ HIA NKNT PGDVSA+ PGGI
Sbjct: 367 MKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGI 426
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEI 491
R+GTPALTSRGF E+DFEKV +F V++A K + G LKDF + ++E + ++
Sbjct: 427 RLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKSFTETNEPFKKDV 485
Query: 492 SNLRDKVEEYAKRFPTVGFE 511
++L +VEE++ +F G E
Sbjct: 486 ADLAKRVEEFSTKFEIPGNE 505
>UNIPROTKB|G4MRB4 [details] [associations]
symbol:MGG_13781 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:CM001231 GO:GO:0006544 GO:GO:0035999 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003710851.1
ProteinModelPortal:G4MRB4 SMR:G4MRB4 EnsemblFungi:MGG_13781T0
GeneID:5049001 KEGG:mgr:MGG_13781 Uniprot:G4MRB4
Length = 516
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 275/413 (66%), Positives = 332/413 (80%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ + LIPSENFTS +V+ A+GS M NKYSEGYPGARYYGGNE+ID +E LCQ+RA
Sbjct: 58 KQRQKHYINLIPSENFTSQAVLDALGSPMQNKYSEGYPGARYYGGNEFIDQSERLCQQRA 117
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+ F LD +WGVNVQ+LSG+PAN VY+AL+ H+R+M LDLPHGGHLSHGYQT TKKI
Sbjct: 118 LETFGLDDKQWGVNVQALSGAPANLYVYSALMGVHDRMMGLDLPHGGHLSHGYQTPTKKI 177
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
S +S +FET+PYRLDESTGYIDY++LE+ A ++RPK+IVAG SAY+R DY R+R++CDK
Sbjct: 178 SFISKYFETVPYRLDESTGYIDYDKLEELAHIYRPKIIVAGTSAYSRFIDYKRMREICDK 237
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQ 310
A MLADMAHISG+VAA VIP PF YAD+VTTTTHKSLRGPRGAMIFFRKGV+ N K
Sbjct: 238 VNAYMLADMAHISGMVAAKVIPGPFGYADIVTTTTHKSLRGPRGAMIFFRKGVRSTNPKT 297
Query: 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
EVMY E+ INQ+VFPG QGGPHNHTI+ LAVALKQ + PE++AYQEQVL N+ FAR
Sbjct: 298 KAEVMYDLENPINQSVFPGHQGGPHNHTIAALAVALKQAQMPEFRAYQEQVLVNAKAFAR 357
Query: 371 SLLER-------GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV 423
L E GY +VSGGT+NHLVL +L+ +GIDG+RVE+VLE V IAANKNTVPGD
Sbjct: 358 RLGEAKGNGGGLGYKIVSGGTDNHLVLADLKPQGIDGARVERVLELVGIAANKNTVPGDK 417
Query: 424 SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKI-KGDTKGTKLK 475
SA+ PGG+RMGTPA+T+RGF E+DF +VA+ D AV +A+++ K K + K
Sbjct: 418 SALTPGGLRMGTPAMTTRGFGEDDFVRVADIVDRAVTIAVRVDKAARKAAEAK 470
Score = 353 (129.3 bits), Expect = 7.7e-31, P = 7.7e-31
Identities = 74/141 (52%), Positives = 102/141 (72%)
Query: 376 GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT 435
GY +VSGGT+NHLVL +L+ +GIDG+RVE+VLE V IAANKNTVPGD SA+ PGG+RMGT
Sbjct: 370 GYKIVSGGTDNHLVLADLKPQGIDGARVERVLELVGIAANKNTVPGDKSALTPGGLRMGT 429
Query: 436 PALTSRGFVEEDFEKVAEFFDAAVKLALKI----------KGDTKGTKLKDFVATLMSDE 485
PA+T+RGF E+DF +VA+ D AV +A+++ KG+ KLK+F+ L + E
Sbjct: 430 PAMTTRGFGEDDFVRVADIVDRAVTIAVRVDKAARKAAEAKGEKSPGKLKNFLEYLGNGE 489
Query: 486 SIQSEISNLRDKVEEYAKRFP 506
+ +SEI LR +V ++ +P
Sbjct: 490 T-ESEIVQLRSEVSDWVGTYP 509
>POMBASE|SPAC24C9.12c [details] [associations]
symbol:SPAC24C9.12c "glycine hydroxymethyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC24C9.12c
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670 GO:GO:0006730
GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OrthoDB:EOG444PTT PIR:T38353 RefSeq:NP_594037.1
ProteinModelPortal:O13972 SMR:O13972 STRING:O13972 PRIDE:O13972
EnsemblFungi:SPAC24C9.12c.1 GeneID:2542651 KEGG:spo:SPAC24C9.12c
OMA:HMVLVDV NextBio:20803700 Uniprot:O13972
Length = 467
Score = 1417 (503.9 bits), Expect = 5.1e-145, P = 5.1e-145
Identities = 270/435 (62%), Positives = 335/435 (77%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + LI SENFTS +VM A+GSVM+NKYSEGYPGARYYGGN++ID E+LCQ+RAL
Sbjct: 29 RQRSSVVLIASENFTSRAVMDALGSVMSNKYSEGYPGARYYGGNKFIDQIETLCQERALA 88
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
AF LDPAKWGVNVQ LSGSPAN QVY A++ PH R+M LDLP GGHLSHGYQTDTKKISA
Sbjct: 89 AFNLDPAKWGVNVQCLSGSPANMQVYQAIMPPHGRLMGLDLPSGGHLSHGYQTDTKKISA 148
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
VS +FE+MPYR+D +TG IDY+ LE A LFRPK++VAG SAY RL DYAR+R++ D
Sbjct: 149 VSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPKILVAGTSAYCRLIDYARMRQIADSVN 208
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A ++ DMAHISGLV+AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFR+G+++ +K+G
Sbjct: 209 AYLVVDMAHISGLVSAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRRGLRKHDKKGNP 268
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
+ Y EDKIN +VFPG QGGPHNHTI+ LAVALKQ + P YK YQ QV+ N+
Sbjct: 269 IYYDLEDKINFSVFPGHQGGPHNHTITALAVALKQCQEPAYKEYQAQVVKNAKVCEEEFK 328
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRM 433
+RGY L + GT++H+VLV++++KG+DG+R E+VLE ++I NKNTVP D SA P GIR+
Sbjct: 329 KRGYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRV 388
Query: 434 GTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTK--GTKLKDFVATLMSDESIQSEI 491
GTPA+T+RGF E+DF +V ++ D A+ A ++ + KLKDF A L E E+
Sbjct: 389 GTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQYP-EL 447
Query: 492 SNLRDKVEEYAKRFP 506
L+ +V E+A FP
Sbjct: 448 VQLQKEVAEWASSFP 462
>MGI|MGI:98299 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006544 "glycine metabolic process" evidence=ISO]
[GO:0006545 "glycine biosynthetic process" evidence=ISO]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0006565
"L-serine catabolic process" evidence=ISO] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=ISO] [GO:0009113 "purine nucleobase
biosynthetic process" evidence=ISO] [GO:0016597 "amino acid
binding" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=ISO] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0046655 "folic acid metabolic process" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051289
"protein homotetramerization" evidence=ISO] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
MGI:MGI:98299 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0009113 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565
EMBL:AL596215 GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 OrthoDB:EOG42Z4Q2
ChiTaRS:SHMT1 EMBL:AF237702 EMBL:BC026055 EMBL:X94478 EMBL:X94479
IPI:IPI00118059 PIR:JC4959 RefSeq:NP_033197.2 UniGene:Mm.364956
PDB:1EJI PDBsum:1EJI ProteinModelPortal:P50431 SMR:P50431
STRING:P50431 PhosphoSite:P50431 REPRODUCTION-2DPAGE:P50431
SWISS-2DPAGE:P50431 PaxDb:P50431 PRIDE:P50431
Ensembl:ENSMUST00000018744 GeneID:20425 KEGG:mmu:20425
InParanoid:Q8R0X9 OMA:KEALEPW ChEMBL:CHEMBL4396
EvolutionaryTrace:P50431 NextBio:298438 Bgee:P50431
CleanEx:MM_SHMT1 Genevestigator:P50431
GermOnline:ENSMUSG00000020534 Uniprot:P50431
Length = 478
Score = 1412 (502.1 bits), Expect = 1.7e-144, P = 1.7e-144
Identities = 272/439 (61%), Positives = 335/439 (76%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E LCQKRAL
Sbjct: 37 RQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQ 96
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
A+ LDP WGVNVQ SGSPANF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA
Sbjct: 97 AYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISA 156
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
SIFFE+MPY++ TGYI+Y+QLE++A+LF PKLI+AG S Y+R DYAR+RK+ D
Sbjct: 157 TSIFFESMPYKVYPETGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNG 216
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+LRG R MIF+RKGV+ ++ K G+
Sbjct: 217 AYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGK 276
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E Y E IN AVFPGLQGGPHNH I+G+AVALKQ T E+K YQ QVL+N + +L
Sbjct: 277 ETYYELESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTTEFKIYQLQVLANCRALSDAL 336
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
E GY +V+GG++NHL+L++LR+KG DG R EKVLE+ IA NKNT PGD SA+ P G+R
Sbjct: 337 TELGYKIVTGGSDNHLILMDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLR 396
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGD--TKGTKLKDFVATLMSDESIQSE 490
+GTPALTSRG +EEDF+KVA F ++L L+I+ TK T LK+F L DE IQS
Sbjct: 397 LGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQSHMATKAT-LKEFKEKLAGDEKIQSA 455
Query: 491 ISNLRDKVEEYAKRFPTVG 509
++ LR++VE +A F G
Sbjct: 456 VATLREEVENFASNFSLPG 474
>UNIPROTKB|E1BS67 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0009113
"purine nucleobase biosynthetic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0046655
"folic acid metabolic process" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 GO:GO:0004372 PANTHER:PTHR11680
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AADN02023704
IPI:IPI00573440 Ensembl:ENSGALT00000008093 Uniprot:E1BS67
Length = 486
Score = 1411 (501.8 bits), Expect = 2.2e-144, P = 2.2e-144
Identities = 267/442 (60%), Positives = 340/442 (76%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E++D E LCQKRA
Sbjct: 43 KQRQRLGLELIASENFASCAVLEALGSCLNNKYSEGYPGQRYYGGTEFVDELERLCQKRA 102
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L AF+LDP KWGVNVQ SGSPANF VYTAL++PH RIM LDLP GGHL+HG+ TD KKI
Sbjct: 103 LQAFRLDPQKWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKI 162
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA-GASAYARLYDYARIRKVCD 250
SA S+FFE+MPY+++ TGYIDY++LE++A LF PKLI+A G S Y+R DYAR+R++ +
Sbjct: 163 SATSVFFESMPYKVNPKTGYIDYDKLEENARLFHPKLIIAAGVSCYSRNLDYARMRQIAN 222
Query: 251 KQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-K 309
A ++ADMAHISGLVAAGV+PSPFE+ DVV+TTTHK+LRG R MIF+RKG + + K
Sbjct: 223 ANSAYLMADMAHISGLVAAGVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGTRSTDPK 282
Query: 310 QGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369
G+E +Y E INQAVFPGLQGGPHNH I+G+AVAL+Q TPE+KAYQ+QV++N A
Sbjct: 283 TGKETLYNLESLINQAVFPGLQGGPHNHAIAGIAVALQQAMTPEFKAYQQQVVANCKTLA 342
Query: 370 RSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPG 429
+L+E GYD+V+GG++NHL+L++LRN+G DG R E+VLE IA NKNT PGDVSA+ P
Sbjct: 343 AALMEMGYDIVTGGSDNHLILLDLRNRGTDGGRAERVLELCSIACNKNTCPGDVSALRPS 402
Query: 430 GIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDT--KGTKLKDFVATLMSDESI 487
G+R GTPALTSRGF ++DF VA + ++L L+++ D K T LK+F L +E
Sbjct: 403 GLRFGTPALTSRGFRQDDFRTVARYIHKGIELTLRVQKDMNPKAT-LKEFKEKL-EEEKY 460
Query: 488 QSEISNLRDKVEEYAKRFPTVG 509
Q E+ L+++VE +A FP G
Sbjct: 461 QGELKALKEEVEAFAATFPLPG 482
>TAIR|locus:2127806 [details] [associations]
symbol:SHM3 "serine hydroxymethyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0009570
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP002687 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:SKELTGW IPI:IPI00529123 RefSeq:NP_001119098.1
RefSeq:NP_567895.1 UniGene:At.27717 ProteinModelPortal:F4JUC7
SMR:F4JUC7 PRIDE:F4JUC7 EnsemblPlants:AT4G32520.1
EnsemblPlants:AT4G32520.2 GeneID:829387 KEGG:ath:AT4G32520
Uniprot:F4JUC7
Length = 529
Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
Identities = 270/439 (61%), Positives = 338/439 (76%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ++ LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID E+LCQ RA
Sbjct: 98 KDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRA 157
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L AF+LD KWGVNVQ LSGSPANF VYTA+L PH+RIM LDLPHGGHLSHG+ T +++
Sbjct: 158 LAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAKRRV 217
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
S SI+FE+MPYRLDESTG +DY+ LEK+A LFRPKLI+AGASAY+R +DY R+RK+ D
Sbjct: 218 SGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADS 277
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A ++ DMAHISGLVAA V+ PFEY D+VTTTTHKSLRGPRG MIFFRK IN G
Sbjct: 278 VGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMIFFRKD--PIN--G 333
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
++ E +N AVFPGLQGGPHNHTI GLAV LK ++PE+KAYQ++V+SN A
Sbjct: 334 VDL----ESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVSNCRALANR 389
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
L+E G+ LVSGG++NHLVLV+LR G+DG+RVEK+L+ I NKN+VPGD SA+VPGGI
Sbjct: 390 LVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNKNSVPGDKSALVPGGI 449
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDE-SIQSE 490
R+G+PA+T+RG E+DF VA+F V++ ++ K G+KL+DF + S E ++
Sbjct: 450 RIGSPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKLQDFNKFVTSPEFPLKER 509
Query: 491 ISNLRDKVEEYAKRFPTVG 509
+ +L+++VE + RFP G
Sbjct: 510 VKSLKERVETFTSRFPIPG 528
>UNIPROTKB|P34896 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0051262 "protein tetramerization" evidence=IDA]
[GO:0046655 "folic acid metabolic process" evidence=IDA;TAS]
[GO:0030170 "pyridoxal phosphate binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA;TAS] [GO:0006565
"L-serine catabolic process" evidence=IDA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IDA] [GO:0006766 "vitamin
metabolic process" evidence=TAS] [GO:0006767 "water-soluble vitamin
metabolic process" evidence=TAS] [GO:0034641 "cellular nitrogen
compound metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0045329 "carnitine
biosynthetic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
UniPathway:UPA00193 Reactome:REACT_111217 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 EMBL:L11931
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0042803
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 DrugBank:DB00114
GO:GO:0016597 GO:GO:0051289 GO:GO:0045329 DrugBank:DB00145
DrugBank:DB00116 EMBL:CH471196 GO:GO:0009113 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 DrugBank:DB01055 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 EMBL:L23928 EMBL:Y14485 EMBL:Y14486 EMBL:Y14487
EMBL:BC007979 EMBL:BC022874 EMBL:BC038598 IPI:IPI00002519
IPI:IPI00220668 IPI:IPI00220669 PIR:A46746 RefSeq:NP_004160.3
RefSeq:NP_683718.1 UniGene:Hs.513987 UniGene:Hs.636044 PDB:1BJ4
PDBsum:1BJ4 ProteinModelPortal:P34896 SMR:P34896 IntAct:P34896
STRING:P34896 PhosphoSite:P34896 DMDM:462184 PaxDb:P34896
PRIDE:P34896 DNASU:6470 Ensembl:ENST00000316694
Ensembl:ENST00000352886 Ensembl:ENST00000354098 GeneID:6470
KEGG:hsa:6470 UCSC:uc002gsz.3 UCSC:uc002gtb.3 GeneCards:GC17M018231
HGNC:HGNC:10850 HPA:HPA023314 MIM:182144 neXtProt:NX_P34896
PharmGKB:PA35753 InParanoid:P34896 OMA:VDLRESH BindingDB:P34896
ChEMBL:CHEMBL1772927 ChiTaRS:SHMT1 EvolutionaryTrace:P34896
GenomeRNAi:6470 NextBio:25133 ArrayExpress:P34896 Bgee:P34896
CleanEx:HS_SHMT1 Genevestigator:P34896 GermOnline:ENSG00000176974
Uniprot:P34896
Length = 483
Score = 1409 (501.1 bits), Expect = 3.6e-144, P = 3.6e-144
Identities = 269/439 (61%), Positives = 340/439 (77%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL
Sbjct: 43 RQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQ 102
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
A++LDP WGVNVQ SGSPANF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA
Sbjct: 103 AYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISA 162
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
SIFFE+MPY+++ TGYI+Y+QLE++A LF PKLI+AG S Y+R +YAR+RK+ D+
Sbjct: 163 TSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENG 222
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+LRG R MIF+RKGVK ++ K G+
Sbjct: 223 AYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGK 282
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E++Y E IN AVFPGLQGGPHNH I+G+AVALKQ T E+K YQ QV++N + +L
Sbjct: 283 EILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEAL 342
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
E GY +V+GG++NHL+LV+LR+KG DG R EKVLE+ IA NKNT PGD SA+ P G+R
Sbjct: 343 TELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLR 402
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTK--LKDFVATLMSDESIQSE 490
+GTPALTSRG +E+DF+KVA F ++L L+I+ DT G + LK+F L D+ Q+
Sbjct: 403 LGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDT-GVRATLKEFKERLAGDK-YQAA 460
Query: 491 ISNLRDKVEEYAKRFPTVG 509
+ LR++VE +A FP G
Sbjct: 461 VQALREEVESFASLFPLPG 479
>ASPGD|ASPL0000008876 [details] [associations]
symbol:AN10745 species:162425 "Emericella nidulans"
[GO:0006544 "glycine metabolic process" evidence=IEA] [GO:0006563
"L-serine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001301 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:LELTHQF ProteinModelPortal:C8V028
EnsemblFungi:CADANIAT00007210 Uniprot:C8V028
Length = 600
Score = 1403 (498.9 bits), Expect = 1.6e-143, P = 1.6e-143
Identities = 276/450 (61%), Positives = 344/450 (76%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ + LIPSENFTS +V+ A+GSVM NKYSEGYPGARYYGGNE+ID AE LCQ+RA
Sbjct: 145 KKRQQHFINLIPSENFTSQAVLDALGSVMQNKYSEGYPGARYYGGNEHIDEAERLCQQRA 204
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+ F+L P +WGVNVQ LSGSPAN +ALL H+R+M LDLPHGGHLSHGYQT TKKI
Sbjct: 205 LETFRLSPEEWGVNVQPLSGSPANLYAISALLNTHDRLMGLDLPHGGHLSHGYQTPTKKI 264
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
S +S +FET+PYRLDESTG IDYE LEK A L+RPKLI+AG SAY+RL DY R+R++ D
Sbjct: 265 SFISKYFETLPYRLDESTGLIDYESLEKQALLYRPKLIIAGTSAYSRLIDYPRMRQIADN 324
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A +++DMAHISGLVAAGVIPSPF ++DVVTTTTHKSLRGPRGAMIF+RKG++ +K+G
Sbjct: 325 AGAYLMSDMAHISGLVAAGVIPSPFAHSDVVTTTTHKSLRGPRGAMIFYRKGIRRTDKKG 384
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+ MY E IN +VFPG QGGPHNHTI+ LAVAL+Q ++ E+K YQE VL+N+ A
Sbjct: 385 NQEMYDLEGPINASVFPGHQGGPHNHTITALAVALQQAQSTEFKTYQETVLANAKSLAER 444
Query: 372 LLER------GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA 425
L GY++VSGGT+NHLVLV+L+N+G+DG+RVE+VLE +A+NKNTVPGD SA
Sbjct: 445 LGGSTSSGGLGYNIVSGGTDNHLVLVDLKNRGVDGARVERVLELCGVASNKNTVPGDRSA 504
Query: 426 MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKI------KGDTKGTK----LK 475
+ PGG+R+GTPA+T+RGF EDF +VA+ D AV + K+ +KG K +K
Sbjct: 505 LKPGGLRLGTPAMTTRGFQPEDFRRVADIVDRAVTITQKLDKSAKESAASKGVKNPNTVK 564
Query: 476 DFVATLMSDESIQSEISNLRDKVEEYAKRF 505
F+ + + E I SEI LR +VE++A F
Sbjct: 565 AFLEYVGNGEEI-SEIVQLRQEVEDWAGTF 593
>RGD|1312011 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISO;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA;TAS] [GO:0006544 "glycine
metabolic process" evidence=IDA;TAS] [GO:0006545 "glycine
biosynthetic process" evidence=IDA] [GO:0006563 "L-serine metabolic
process" evidence=TAS] [GO:0006565 "L-serine catabolic process"
evidence=IEA;ISO] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IDA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA;ISO] [GO:0016597 "amino acid binding" evidence=IPI]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO;IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0046655 "folic acid metabolic
process" evidence=IEA;ISO] [GO:0051262 "protein tetramerization"
evidence=ISO] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 RGD:1312011 GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0009113
GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 GO:GO:0008732 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264
CTD:6470 GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 UniGene:Rn.3684 EMBL:AY383687 IPI:IPI00421364
RefSeq:NP_001041307.1 SMR:Q6TXG7 STRING:Q6TXG7
Ensembl:ENSRNOT00000007092 GeneID:287379 KEGG:rno:287379
UCSC:RGD:1312011 InParanoid:Q6TXG7 NextBio:625985
Genevestigator:Q6TXG7 Uniprot:Q6TXG7
Length = 681
Score = 1402 (498.6 bits), Expect = 2.0e-143, P = 2.0e-143
Identities = 268/438 (61%), Positives = 332/438 (75%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL
Sbjct: 240 RQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQ 299
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
A+ LDP WGVNVQ SGSPANF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA
Sbjct: 300 AYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISA 359
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
SIFFE+MPY++ TGYI+Y+QLE++A+LF PKLI+AG S Y+R DYAR+RK+ D
Sbjct: 360 TSIFFESMPYKVYPDTGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNG 419
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+LRG R MIF+RKGV+ ++ K G+
Sbjct: 420 AYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGE 479
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E Y E IN AVFPGLQGGPHNH I+G+AVALKQ T E+K YQ QVL+N + +L
Sbjct: 480 ETYYELESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTTEFKIYQLQVLANCRALSDAL 539
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
E GY +V+GG++NHL+L++LR KG DG R EKVLE+ IA NKNT PGD SA+ P G+R
Sbjct: 540 TELGYKIVTGGSDNHLILMDLRPKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLR 599
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGD-TKGTKLKDFVATLMSDESIQSEI 491
+GTPALTSRG +EEDF+K+A F ++L L+I+ T LK+F L DE QS +
Sbjct: 600 LGTPALTSRGLLEEDFQKIAHFIHRGIELTLQIQSHMTMRATLKEFKEKLTGDEKFQSAV 659
Query: 492 SNLRDKVEEYAKRFPTVG 509
+ LR++VE +A F G
Sbjct: 660 AALREEVENFASNFSLPG 677
>UNIPROTKB|E2RIV3 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0051262 "protein tetramerization" evidence=IEA]
[GO:0046655 "folic acid metabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739
GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 GO:GO:0009113
GO:GO:0006544 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 CTD:6470
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AAEX03003713
EMBL:AAEX03003714 RefSeq:XP_851819.2 Ensembl:ENSCAFT00000028996
GeneID:489536 KEGG:cfa:489536 Uniprot:E2RIV3
Length = 484
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 266/438 (60%), Positives = 335/438 (76%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ GLELI SENFTS +V++A+GS + NKYSEGYPG RYYGG E+ID E LCQKRAL
Sbjct: 43 RQRVGLELIASENFTSRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEILCQKRALQ 102
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
+ LDP WGVNVQ SGSPANF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA
Sbjct: 103 VYGLDPECWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISA 162
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
SIFFE+MPY+++ TGYI+Y+QLE++A LF PKLI+AG S Y+R DYAR+RK+ D
Sbjct: 163 TSIFFESMPYKVNPETGYINYDQLEENARLFHPKLIIAGTSCYSRNLDYARLRKIADDNG 222
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ADMAHISGLVAAGV+PSPFE+ VV+TTTHK+LRG R +IF+R+GV+ ++ K G+
Sbjct: 223 AYLMADMAHISGLVAAGVVPSPFEHCHVVSTTTHKTLRGCRAGIIFYRRGVRSVDPKTGK 282
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E +Y E IN AVFPGLQGGPHNH I+G+AVALKQ TPE++ YQ QV++N A +L
Sbjct: 283 ETLYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFRLYQHQVVANCRVLAETL 342
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
+E GY +V+GG++NHL+LV+LR+KG DG R EKVLE+ IA NKNT PGD SA+ P G+R
Sbjct: 343 MELGYKVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLR 402
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKG-TKLKDFVATLMSDESIQSEI 491
+GTPALTSRG +E++F+KVA+F ++L L+I+ D LK+F L DE Q I
Sbjct: 403 LGTPALTSRGLLEKEFQKVAQFVHRGIELTLQIQNDIGARATLKEFREKLAGDEKHQRAI 462
Query: 492 SNLRDKVEEYAKRFPTVG 509
LR++VE +A FP G
Sbjct: 463 RALREEVESFASLFPLPG 480
>UNIPROTKB|E2R4L7 [details] [associations]
symbol:SHMT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:AAEX03006944 EMBL:AAEX03006943
Ensembl:ENSCAFT00000000313 NextBio:20893182 Uniprot:E2R4L7
Length = 531
Score = 1395 (496.1 bits), Expect = 1.1e-142, P = 1.1e-142
Identities = 265/414 (64%), Positives = 328/414 (79%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 109 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 168
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDPA+WGVNVQ SGSPAN YTALL+PH+RIM LDLP GGHL+HGY +D K++
Sbjct: 169 LEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRV 228
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SIFFE+MPY+L+ TG IDY+QL +A LFRP+LI+AG SAYARL DYAR+R+VCD+
Sbjct: 229 SATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDE 288
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQ 310
KA +LADMAHISGLVAA VIPSPF++ADVVTTTTHK+LRG R +IF+RKG++ ++ K
Sbjct: 289 VKAHLLADMAHISGLVAAKVIPSPFKHADVVTTTTHKTLRGARSGLIFYRKGMRAVDPKT 348
Query: 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
G+E+ Y +ED+IN AVFP LQGGPHNH I+ +AVALKQ TP ++ Y QVL N+ A
Sbjct: 349 GREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPTFREYALQVLKNARAMAD 408
Query: 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430
+LLERGY LVSGGT+NHLVLV+LR KG+DG+R E+VLE V I ANKNT PGD SA+ PGG
Sbjct: 409 ALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGG 468
Query: 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSD 484
+R+G PALTSR F E+DF +V +F D V + L++K T KL+DF + L+ D
Sbjct: 469 LRLGAPALTSRQFREDDFRRVVDFIDEGVHIGLEVKNKT--AKLQDFKSFLLKD 520
>ASPGD|ASPL0000040474 [details] [associations]
symbol:AN3058 species:162425 "Emericella nidulans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;RCA] [GO:0006520 "cellular amino acid metabolic
process" evidence=RCA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001306 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:FRRGVRS ProteinModelPortal:C8VIR5
EnsemblFungi:CADANIAT00010021 Uniprot:C8VIR5
Length = 471
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 266/436 (61%), Positives = 330/436 (75%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + + LI SENFTS +V A+GS M NKYSEGYPGARYYGGN++ID E LCQ RAL
Sbjct: 35 RQRESVVLIASENFTSRAVFDALGSPMCNKYSEGYPGARYYGGNQHIDAIELLCQSRALK 94
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
AF LD KWGVNVQ LSGSPAN QVY AL++PH+R+M LDLPHGGHLSHGYQT ++KISA
Sbjct: 95 AFNLDADKWGVNVQCLSGSPANLQVYQALMRPHDRLMGLDLPHGGHLSHGYQTPSRKISA 154
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
VS +FET PYR++ TG IDY+ LE +A L+RPK++VAG SAY RL DYAR+RK+ DK
Sbjct: 155 VSTYFETFPYRVNLETGIIDYDTLEANAELYRPKILVAGTSAYCRLIDYARMRKIADKVG 214
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ DMAHISGL+AAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGV+ + K G+
Sbjct: 215 AYLVVDMAHISGLIAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVRSTDPKTGK 274
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
++MY E IN +VFPG QGGPHNHTI+ L+VALK T E+K YQEQV+ N+
Sbjct: 275 DIMYDLEGPINFSVFPGHQGGPHNHTITALSVALKYAATTEFKQYQEQVIKNAKALENEF 334
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
G+ LVS GT++H+VLV+LR K +DG+RVE VLE ++IA NKN++PGD SA+ P GIR
Sbjct: 335 KAIGHKLVSDGTDSHMVLVDLRPKSLDGARVEAVLEQINIACNKNSIPGDKSALTPCGIR 394
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKG--DTKGTKLKDFVATLMSDESIQSE 490
+G PA+TSRG EEDF+++A + D A+ + ++ T KLKDF A + S E
Sbjct: 395 IGAPAMTSRGMGEEDFKRIARYIDQAINICKSVQAALPTDANKLKDFKAKVAS--GTVPE 452
Query: 491 ISNLRDKVEEYAKRFP 506
I++LR ++ +A FP
Sbjct: 453 INDLRKEIAAWASTFP 468
>UNIPROTKB|Q5E9P9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9913 "Bos taurus" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] [GO:0046655 "folic acid metabolic
process" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic
process" evidence=IEA] [GO:0006565 "L-serine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 EMBL:BT020871 EMBL:BC112563
IPI:IPI00695792 RefSeq:NP_001015553.1 UniGene:Bt.88340
ProteinModelPortal:Q5E9P9 SMR:Q5E9P9 STRING:Q5E9P9 PRIDE:Q5E9P9
Ensembl:ENSBTAT00000022732 GeneID:509002 KEGG:bta:509002 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 InParanoid:Q5E9P9
OrthoDB:EOG42Z4Q2 NextBio:20868773 Uniprot:Q5E9P9
Length = 484
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 265/439 (60%), Positives = 332/439 (75%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E LCQKRAL
Sbjct: 43 RQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQ 102
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
+ LD WGVNVQ SGSPANF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA
Sbjct: 103 VYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISA 162
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
SIFFE+MPY+++ TGYI+Y+QLE++A LF P+LI+AG S Y+R DYAR+RK+ D
Sbjct: 163 TSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLIIAGTSCYSRNLDYARLRKIADDNG 222
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ADMAH+SGLVAAGV+PSPFE+ VV+TTTHK+LRG R MIF+RKGV+ ++ K G+
Sbjct: 223 AYLMADMAHVSGLVAAGVVPSPFEHCHVVSTTTHKTLRGCRAGMIFYRKGVRSVDPKTGR 282
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E Y E IN AVFPGLQGGPHNH I+G+AVALKQ TPE++AYQ QV++N A +L
Sbjct: 283 ETRYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFRAYQRQVVANCRALAEAL 342
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
+ GY +V+GG++NHL+LV+LR+KG DG R EKVLE+ IA NKNT PGD SA+ P G+R
Sbjct: 343 MGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLR 402
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTK--LKDFVATLMSDESIQSE 490
+GTPALTSRG +EEDF+KVA F ++L L+I+ D G K LK+F+ L E
Sbjct: 403 LGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQ-DAVGVKATLKEFMEKLAGAEEHHRA 461
Query: 491 ISNLRDKVEEYAKRFPTVG 509
++ LR +VE +A FP G
Sbjct: 462 VAALRAEVESFATLFPLPG 480
>ZFIN|ZDB-GENE-040426-1558 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1
(soluble)" species:7955 "Danio rerio" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
ZFIN:ZDB-GENE-040426-1558 GO:GO:0005829 GO:GO:0005634 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 GeneTree:ENSGT00390000002762
EMBL:BX649440 IPI:IPI00994921 Ensembl:ENSDART00000124883
Bgee:F1QY03 Uniprot:F1QY03
Length = 504
Score = 1372 (488.0 bits), Expect = 3.0e-140, P = 3.0e-140
Identities = 267/443 (60%), Positives = 335/443 (75%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ GLELI SENFTS +V++A+GS M NKYSEGYPG RYYGG E++D E LCQ RA
Sbjct: 63 KKRQTYGLELIASENFTSRAVLEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQDRA 122
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L + LDP KWGVNVQ SGSPANF VYTA+++PH RIM LDLP GGHL+HG+ TD KKI
Sbjct: 123 LKVYGLDPEKWGVNVQPYSGSPANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTDKKKI 182
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA S +MPY+++ TGYIDY +LE++A LF P+LI+AG S Y+R DY+R+RK+ D+
Sbjct: 183 SATS----SMPYKVNPETGYIDYNRLEENARLFHPRLIIAGTSCYSRNLDYSRLRKIADE 238
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQ 310
A +LADMAHISGLVAAGV+PSPFEY DVV+TTTHK+LRG R +IFFRKGV+ ++ K
Sbjct: 239 NGAYLLADMAHISGLVAAGVVPSPFEYCDVVSTTTHKTLRGCRAGVIFFRKGVRSVDAKT 298
Query: 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
G+E MY E INQAVFPGLQGGPHNH I+G+AVALKQ TPE+K YQ QVL+N A
Sbjct: 299 GKETMYNLESLINQAVFPGLQGGPHNHAIAGVAVALKQALTPEFKTYQLQVLANCKALAS 358
Query: 371 SLLERGYDLVS--GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVP 428
+L+++GY +V+ GG++NHL+LV+LR+ G DG R EKVLE+ IA NKNT PGD SA+ P
Sbjct: 359 ALMDKGYKVVTDKGGSDNHLILVDLRSNGTDGGRAEKVLEACAIACNKNTCPGDKSALRP 418
Query: 429 GGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDT--KGTKLKDFVATLMSDES 486
G+R+G+PALTSRG +EE F KVAEF + L L+I+ + K T LK+F L +E
Sbjct: 419 SGLRLGSPALTSRGLLEEHFHKVAEFIHQGIVLTLEIQKNMNPKAT-LKEFKEELAQNEK 477
Query: 487 IQSEISNLRDKVEEYAKRFPTVG 509
Q +I +R +VE++A +FP G
Sbjct: 478 YQLKIKEIRKEVEDFAGKFPMPG 500
>SGD|S000004048 [details] [associations]
symbol:SHM2 "Cytosolic serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IMP;IDA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0006730 "one-carbon metabolic
process" evidence=IEA;IGI;IMP] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0043332 "mating projection
tip" evidence=IDA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000004048
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0043332 EMBL:BK006945 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 EMBL:X94607 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 EMBL:L22529 EMBL:Z73230 PIR:S61632
RefSeq:NP_013159.1 ProteinModelPortal:P37291 SMR:P37291
DIP:DIP-2602N IntAct:P37291 MINT:MINT-423439 STRING:P37291
PaxDb:P37291 PeptideAtlas:P37291 PRIDE:P37291 EnsemblFungi:YLR058C
GeneID:850747 KEGG:sce:YLR058C CYGD:YLR058c OMA:FRRGVRS
OrthoDB:EOG444PTT BioCyc:MetaCyc:YLR058C-MONOMER NextBio:966873
Genevestigator:P37291 GermOnline:YLR058C Uniprot:P37291
Length = 469
Score = 1369 (487.0 bits), Expect = 6.3e-140, P = 6.3e-140
Identities = 260/437 (59%), Positives = 335/437 (76%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ ++LI SENFTS SV A+G+ ++NKYSEGYPGARYYGGNE+ID E LCQ+RAL
Sbjct: 34 RQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPGARYYGGNEHIDRMEILCQQRALK 93
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
AF + P KWGVNVQ+LSGSPAN QVY A++KPHER+M L LP GGHLSHGY T+ +KISA
Sbjct: 94 AFHVTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLYLPDGGHLSHGYATENRKISA 153
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
VS +FE+ PYR++ TG IDY+ LEK+A L+RPK++VAG SAY RL DY R+R++ DK
Sbjct: 154 VSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKVLVAGTSAYCRLIDYKRMREIADKCG 213
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ DMAHISGL+AAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIFFR+GV+ IN K G+
Sbjct: 214 AYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSINPKTGK 273
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
EV+Y E+ IN +VFPG QGGPHNHTI+ LA ALKQ TPE+K YQ QVL N+
Sbjct: 274 EVLYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQVLKNAKALESEF 333
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
GY LVS GT++H+VLV+LR KG+DG+RVE + E ++IA NKN++PGD SA+VPGG+R
Sbjct: 334 KNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVR 393
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTK--GTKLKDFVATLMSDESIQSE 490
+G PA+T+RG EEDF ++ ++ + AV+ A +++ +LKDF A + DE S+
Sbjct: 394 IGAPAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKV--DEG--SD 449
Query: 491 ISNL-RDKVEEYAKRFP 506
+ N + ++ ++A +P
Sbjct: 450 VLNTWKKEIYDWAGEYP 466
>UNIPROTKB|G4NDG3 [details] [associations]
symbol:MGG_00923 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CM001235 GO:GO:0008168
GO:GO:0043581 GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003718036.1
ProteinModelPortal:G4NDG3 SMR:G4NDG3 EnsemblFungi:MGG_00923T0
GeneID:2674480 KEGG:mgr:MGG_00923 Uniprot:G4NDG3
Length = 482
Score = 1366 (485.9 bits), Expect = 1.3e-139, P = 1.3e-139
Identities = 263/436 (60%), Positives = 333/436 (76%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + + LI SEN TS +V A+GS M+NKYSEGYPG RYYGGN++ID E LCQ+RAL
Sbjct: 37 RQRESIILIASENVTSRAVFDALGSPMSNKYSEGYPGKRYYGGNQHIDEIELLCQRRALA 96
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
AF + KWGVNVQ LSGSPAN QVY A++ PH R+M LDLPHGGHLSHGYQT +KISA
Sbjct: 97 AFNVTEDKWGVNVQCLSGSPANLQVYQAIMPPHGRLMGLDLPHGGHLSHGYQTPQRKISA 156
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
VS +FETMPYR+D TG IDY+QLEK+ L+RPK++VAG SAY RL DYAR+RK+ D
Sbjct: 157 VSTYFETMPYRVDLETGIIDYDQLEKNVVLYRPKILVAGTSAYCRLIDYARMRKIADLVG 216
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ D+AHISGLVA+GVIPSPF +ADVVTTTTHKSLRGPRGAMIFFR+GV+ ++ K G+
Sbjct: 217 AYLVVDIAHISGLVASGVIPSPFLHADVVTTTTHKSLRGPRGAMIFFRRGVRSVDPKTGK 276
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E MY E+ IN +VFPG QGGPHNHTI+ LAVALKQ TPE+KAYQ+QV+ N+ S
Sbjct: 277 ETMYDLEEPINFSVFPGHQGGPHNHTITALAVALKQASTPEFKAYQQQVVDNAKALENSF 336
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
E G+ LVS GT++H+VLV+LR +DG+RVE VLE ++IA NKN++PGD SA+ P GIR
Sbjct: 337 KELGHKLVSDGTDSHMVLVDLRAHSLDGARVEAVLEQINIACNKNSIPGDKSALTPCGIR 396
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKG--DTKGTKLKDFVATLMSDESIQSE 490
+GTPA+TSRGF E F++VA++ D ++K+ ++ + KLKDF A + S E S
Sbjct: 397 IGTPAMTSRGFGVEHFQRVAKYIDESIKICKDVQAALPKEANKLKDFKAKVASGEV--SR 454
Query: 491 ISNLRDKVEEYAKRFP 506
I+ L+ ++ + + FP
Sbjct: 455 INELKKEIASWCQTFP 470
>FB|FBgn0029823 [details] [associations]
symbol:CG3011 species:7227 "Drosophila melanogaster"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006564 "L-serine biosynthetic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0048149 "behavioral response
to ethanol" evidence=IMP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014298 GO:GO:0048149
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 HSSP:P07511
OMA:VDLRESH UniGene:Dm.11053 GeneID:31524 KEGG:dme:Dmel_CG3011
FlyBase:FBgn0029823 GenomeRNAi:31524 NextBio:774055 EMBL:BT011432
RefSeq:NP_572278.1 SMR:Q9W457 IntAct:Q9W457 MINT:MINT-313386
STRING:Q9W457 EnsemblMetazoa:FBtr0070827 UCSC:CG3011-RA
InParanoid:Q9W457 Uniprot:Q9W457
Length = 537
Score = 1364 (485.2 bits), Expect = 2.1e-139, P = 2.1e-139
Identities = 248/440 (56%), Positives = 331/440 (75%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLE+I SENFTSV+V++++ S +TNKYSEGYPG RYYGGNEYID E L Q+R
Sbjct: 96 KERQREGLEMIASENFTSVAVLESLSSCLTNKYSEGYPGKRYYGGNEYIDRIELLAQQRG 155
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
+ F LD KWGVNVQ SGSPAN VYT + +PH+RIM LDLP GGHL+HG+ T TKKI
Sbjct: 156 RELFNLDDEKWGVNVQPYSGSPANLAVYTGVCRPHDRIMGLDLPDGGHLTHGFFTPTKKI 215
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SIFFE+MPY+++ TG IDY++L ++A FRP++I+AG S Y+RL DYAR R++CD
Sbjct: 216 SATSIFFESMPYKVNPETGIIDYDKLAEAAKNFRPQIIIAGISCYSRLLDYARFRQICDD 275
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A ++ADMAH++G+VAAG+IPSPFE+AD+VTTTTHK+LRGPR +IFFRKGV+ G
Sbjct: 276 VGAYLMADMAHVAGIVAAGLIPSPFEWADIVTTTTHKTLRGPRAGVIFFRKGVRSTKANG 335
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+V+Y E++INQAVFP LQGGPHN+ ++G+A A KQ K+PE+KAYQ QVL N+
Sbjct: 336 DKVLYDLEERINQAVFPSLQGGPHNNAVAGIATAFKQAKSPEFKAYQTQVLKNAKALCDG 395
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
L+ RGY + +GGT+ HLVLV++R G+ G++ E +LE V IA NKNTVPGD SAM P GI
Sbjct: 396 LISRGYQVATGGTDVHLVLVDVRKAGLTGAKAEYILEEVGIACNKNTVPGDKSAMNPSGI 455
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEI 491
R+GTPALT+RG E+D E+V F DAA+K+ ++ K+ D+ TL + +++++
Sbjct: 456 RLGTPALTTRGLAEQDIEQVVAFIDAALKVGVQAAKLAGSPKITDYHKTLAENVELKAQV 515
Query: 492 SNLRDKVEEYAKRFPTVGFE 511
+R V +++++FP G E
Sbjct: 516 DEIRKNVAQFSRKFPLPGLE 535
>TAIR|locus:2129251 [details] [associations]
symbol:SHM4 "serine hydroxymethyltransferase 4"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISS;IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829 GO:GO:0005886
GO:GO:0009506 GO:GO:0046686 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97335 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 EMBL:AL161537 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:LKEVASP HSSP:P07511 ProtClustDB:PLN03226 EMBL:AF361589
EMBL:AY093987 IPI:IPI00532971 PIR:B71400 RefSeq:NP_193129.1
UniGene:At.23373 ProteinModelPortal:O23254 SMR:O23254 STRING:O23254
PaxDb:O23254 PRIDE:O23254 ProMEX:O23254 EnsemblPlants:AT4G13930.1
GeneID:827027 KEGG:ath:AT4G13930 TAIR:At4g13930 InParanoid:O23254
PhylomeDB:O23254 Genevestigator:O23254 Uniprot:O23254
Length = 471
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 259/450 (57%), Positives = 328/450 (72%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RYYGGNE+ID E+LC+ RA
Sbjct: 27 KRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGIPGNRYYGGNEFIDEIENLCRSRA 86
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDT-KK 190
L+AF DPA WGVNVQ SGSPANF YTALL+PH+RIM LDLP GGHL+HGY T KK
Sbjct: 87 LEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHLTHGYYTSGGKK 146
Query: 191 ISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCD 250
ISA SI+FE++PY+++ +TGYIDY++LE+ A FRPKL++ G SAY R +DYAR R + D
Sbjct: 147 ISATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRPKLLICGGSAYPRDWDYARFRAIAD 206
Query: 251 KQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK- 309
K A++L DMAHISGLVAA +PFEY DVVTTTTHKSLRGPR MIF+RKG K K
Sbjct: 207 KVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKG 266
Query: 310 QGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369
Q + +Y +EDKIN AVFP LQGGPHNH I LAVALKQ TP +K Y +QV +N+
Sbjct: 267 QPEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANTPGFKVYAKQVKANAVALG 326
Query: 370 RSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPG 429
L+ +GY +V+ GTENHLVL +LR G+ G++VEK+ + I NKN V GD SA+ PG
Sbjct: 327 NYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAPG 386
Query: 430 GIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQS 489
G+R+G PA+TSRG VE+DFE++ EF AV L L I+ T G LKDF L++++
Sbjct: 387 GVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTLDIQ-KTYGKLLKDFNKGLVNNK---- 441
Query: 490 EISNLRDKVEEYAKRFPTVGFEKETMKYKN 519
++ L+ VE+++ + GF MKYK+
Sbjct: 442 DLDQLKADVEKFSASYEMPGFLMSEMKYKD 471
>SGD|S000000467 [details] [associations]
symbol:SHM1 "Mitochondrial serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IMP] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;IGI;IMP] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IGI] [GO:0016740 "transferase
activity" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000000467
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:BK006936 EMBL:X70529
EMBL:Z36131 GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
OrthoDB:EOG4V1B88 GO:GO:0009070 EMBL:L22528 PIR:S29348
RefSeq:NP_009822.4 RefSeq:NP_009827.3 ProteinModelPortal:P37292
SMR:P37292 DIP:DIP-4952N IntAct:P37292 MINT:MINT-548725
STRING:P37292 PaxDb:P37292 PeptideAtlas:P37292 PRIDE:P37292
EnsemblFungi:YBR263W GeneID:852565 GeneID:852571 KEGG:sce:YBR263W
KEGG:sce:YBR268W CYGD:YBR263w OMA:GFNENDV
BioCyc:MetaCyc:YBR263W-MONOMER NextBio:971682 Genevestigator:P37292
GermOnline:YBR263W Uniprot:P37292
Length = 490
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 250/440 (56%), Positives = 332/440 (75%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + LIPSENFTS +VM +GS + NKYSEGYPG RYYGGNE ID +ESLCQ RAL+
Sbjct: 50 RQKHSITLIPSENFTSKAVMDLLGSELQNKYSEGYPGERYYGGNEIIDKSESLCQARALE 109
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDT-KKIS 192
+ LDPAKWGVNVQ LSG+PAN VY+A++ ER+M LDLP GGHLSHGYQ + IS
Sbjct: 110 LYGLDPAKWGVNVQPLSGAPANLYVYSAIMNVGERLMGLDLPDGGHLSHGYQLKSGTPIS 169
Query: 193 AVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ 252
+S +F++MPY +D +TG IDY+ L+ A FRPK+IVAG SAY+RL DYAR +++
Sbjct: 170 FISKYFQSMPYHVDHTTGLIDYDNLQVLAKAFRPKVIVAGTSAYSRLIDYARFKEISQGC 229
Query: 253 KAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQ 312
A +++DMAHISGLVAA V+PSPFE++D+VTTTTHKSLRGPRGAMIFFRKG+K + K+G+
Sbjct: 230 GAYLMSDMAHISGLVAANVVPSPFEHSDIVTTTTHKSLRGPRGAMIFFRKGIKSVTKKGK 289
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E+ Y E KIN +VFPG QGGPHNHTI +AVALKQ +PE+K YQ++++ NS FA+ L
Sbjct: 290 EIPYELEKKINFSVFPGHQGGPHNHTIGAMAVALKQAMSPEFKEYQQKIVDNSKWFAQEL 349
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432
+ GY LVSGGT+NHL++++L +DG+RVE +L +++IAANKNT+PGD SA+ P G+R
Sbjct: 350 TKMGYKLVSGGTDNHLIVIDLSGTQVDGARVETILSALNIAANKNTIPGDKSALFPSGLR 409
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESI---QS 489
+GTPA+T+RGF E+F +VA++ D+AVKLA +K TKL D + L + + S
Sbjct: 410 IGTPAMTTRGFGREEFSQVAKYIDSAVKLAENLKTLEPTTKL-DARSRLNEFKKLCNESS 468
Query: 490 EISNLRDKVEEYAKRFPTVG 509
E++ L ++ ++ ++P G
Sbjct: 469 EVAALSGEISKWVGQYPVPG 488
>DICTYBASE|DDB_G0277947 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;ISS] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0277947 GO:GO:0005829 GO:GO:0045335 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897
RefSeq:XP_642026.1 ProteinModelPortal:Q54Z26 SMR:Q54Z26
STRING:Q54Z26 EnsemblProtists:DDB0230072 GeneID:8621237
KEGG:ddi:DDB_G0277947 OMA:LKEVASP ProtClustDB:PTZ00094
Uniprot:Q54Z26
Length = 457
Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
Identities = 252/439 (57%), Positives = 330/439 (75%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ+KGLELI SENFTS +VM+A+GS TNKY+EGYPG+RYYGG E +D E+LCQKRA
Sbjct: 25 KDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRYYGGTEVVDELETLCQKRA 84
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L AF+LD +KWGVNVQ SGSPANF VYTALL+PH+RIM LDLP GGHL+HGYQTD KKI
Sbjct: 85 LKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGYQTDKKKI 144
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SIFFE+MPY++ + G IDY++LE++A LF+PKLI++GASAY R +DY R+R + DK
Sbjct: 145 SASSIFFESMPYQIG-ADGLIDYQRLEENALLFKPKLIISGASAYPREWDYKRMRAIADK 203
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A ++ DMAH SGLVAA ++ SPF+Y DVVT+TTHK+LRGPR +IFFR+G K ++ G
Sbjct: 204 VGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLRGPRSGIIFFRRG-KRVDGNG 262
Query: 312 QEVM-YAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370
+E+ Y E KIN AVFP LQGGPH + I+G+AVALK+ + E+K Y QV N++
Sbjct: 263 KEIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEADSQEFKEYALQVKKNAAAIGN 322
Query: 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430
+L+ +GY LV+ GT+NHL+L +LR K + G++ EK + +I NKN V GD +A+ PGG
Sbjct: 323 ALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIANITVNKNAVHGDTNAISPGG 382
Query: 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSE 490
IR+G+ ALTSRG E DFEK+A+F D V ++L+I+G G KL DFV + + E
Sbjct: 383 IRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGRV-GKKLVDFVVEINKSK----E 437
Query: 491 ISNLRDKVEEYAKRFPTVG 509
+ +LR +VEE++ +F G
Sbjct: 438 LLDLRKEVEEFSSKFTLPG 456
>DICTYBASE|DDB_G0291652 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2"
species:44689 "Dictyostelium discoideum" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;ISS] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0291652 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005759
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:DYLIDMD
HSSP:P34897 ProtClustDB:PTZ00094 RefSeq:XP_635129.1
ProteinModelPortal:Q54EW1 SMR:Q54EW1 STRING:Q54EW1 PRIDE:Q54EW1
EnsemblProtists:DDB0230073 GeneID:8628075 KEGG:ddi:DDB_G0291652
Uniprot:Q54EW1
Length = 481
Score = 1280 (455.6 bits), Expect = 1.7e-130, P = 1.7e-130
Identities = 245/438 (55%), Positives = 320/438 (73%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ+ GLELI SENFTS +VM+++GS TNKY+EG PGARYYGGNE +D E+LC KRA
Sbjct: 49 KQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARYYGGNEVVDQLENLCIKRA 108
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+ F L+P +WGVNVQ SGS ANF +T LLKPH+RIM LDLP GGHL+HGYQTD KKI
Sbjct: 109 LETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLDLPSGGHLTHGYQTDKKKI 168
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
SA SIFFE+MPY+++E TGY+DY ++E +AALFRPKL++AGASAY R +DY R+RK+ DK
Sbjct: 169 SATSIFFESMPYQVNE-TGYVDYNKMEANAALFRPKLLIAGASAYPREWDYERMRKIADK 227
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A +L DMAHISG+VA SPF + DVVTTTTHK+LRGPR +IFFRK K + +G
Sbjct: 228 HGAYLLCDMAHISGMVAGKQAISPFLFCDVVTTTTHKTLRGPRAGLIFFRK-TKRRDAKG 286
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+ E++IN AVFP QGGPH +TI+G+AVALK+ +P+++ Y +QV NS
Sbjct: 287 NIIDDDLENRINFAVFPSCQGGPHENTIAGIAVALKEASSPDFQEYTKQVRRNSQTMGEE 346
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
L +RGY LV+ GT+NHLVL +LR +GI GS++EK + HI NKN V GD +A+ PGG+
Sbjct: 347 LKKRGYSLVTEGTDNHLVLWDLRPQGITGSKIEKACDEAHITVNKNAVYGDTNAIAPGGV 406
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEI 491
R+G PALTSRG E+DF KV +F D VK++L I+ G K+ DF + ++ ++
Sbjct: 407 RLGAPALTSRGLKEQDFVKVVDFLDRVVKISLDIQSKV-GKKMPDFQRAIADNQ----DL 461
Query: 492 SNLRDKVEEYAKRFPTVG 509
+R +V+E++ +F G
Sbjct: 462 KQIRQEVKEFSTKFGMPG 479
>TAIR|locus:2119545 [details] [associations]
symbol:EDA36 "EMBRYO SAC DEVELOPMENT ARREST 37"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0010197 "polar nucleus fusion" evidence=IMP]
[GO:0009555 "pollen development" evidence=IMP] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009555 GO:GO:0008168
GO:GO:0006544 GO:GO:0010197 GO:GO:0035999 EMBL:AL035528
EMBL:AL161537 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN03226 IPI:IPI00536506 PIR:T05258 RefSeq:NP_193125.1
UniGene:At.33326 ProteinModelPortal:Q9SVM4 SMR:Q9SVM4 STRING:Q9SVM4
EnsemblPlants:AT4G13890.1 GeneID:827024 KEGG:ath:AT4G13890
TAIR:At4g13890 InParanoid:Q9SVM4 OMA:MAHNSAL PhylomeDB:Q9SVM4
ArrayExpress:Q9SVM4 Genevestigator:Q9SVM4 Uniprot:Q9SVM4
Length = 470
Score = 1257 (447.5 bits), Expect = 4.6e-128, P = 4.6e-128
Identities = 247/441 (56%), Positives = 316/441 (71%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +G+ELI +ENFTSV+VM+A+GS +TNKYSEG PG RYYGG E+ID ESLC+ R+
Sbjct: 27 KHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRS 86
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDT-KK 190
L+AF +P KWGVNVQ SGSPANF YTALL+PH+RIM LDLP GGH++HGY + K
Sbjct: 87 LEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKN 146
Query: 191 ISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCD 250
ISA SI+FE +PY++D TGYIDY++LE+ A FRPKLI+ G ++Y R +DYAR R V D
Sbjct: 147 ISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVAD 206
Query: 251 KQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK- 309
K A +L DMAH S LVAA PFEY DVVTT+THKSLRGPR MIF+RKG K K
Sbjct: 207 KVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKG 266
Query: 310 QGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369
Q + +Y ++ KIN AVFP LQ GPHN+ I LAVALKQV P +K Y +QV +N++ A
Sbjct: 267 QPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLA 326
Query: 370 RSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPG 429
L+ +GY LV+ GT+NHL+L +LR G+ G++VEKV E +I N+N V GD S + PG
Sbjct: 327 SYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPG 386
Query: 430 GIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQS 489
G+R+GTPA+TSRG VE+DFEK+ EF AV + L I+ + G +KDF L++++
Sbjct: 387 GVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQ-EQYGKVMKDFNKGLVNNK---- 441
Query: 490 EISNLRDKVEEYAKRFPTVGF 510
EI ++ VEE+ F GF
Sbjct: 442 EIDEIKADVEEFTYDFDMPGF 462
>UNIPROTKB|A8MYA6 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005634 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
EMBL:AC127537 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 IPI:IPI00793862
ProteinModelPortal:A8MYA6 SMR:A8MYA6 STRING:A8MYA6
Ensembl:ENST00000395685 ArrayExpress:A8MYA6 Bgee:A8MYA6
Uniprot:A8MYA6
Length = 446
Score = 1215 (432.8 bits), Expect = 1.3e-123, P = 1.3e-123
Identities = 227/349 (65%), Positives = 280/349 (80%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL
Sbjct: 43 RQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQ 102
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
A++LDP WGVNVQ SGSPANF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA
Sbjct: 103 AYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISA 162
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
SIFFE+MPY+++ TGYI+Y+QLE++A LF PKLI+AG S Y+R +YAR+RK+ D+
Sbjct: 163 TSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENG 222
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQ 312
A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+LRG R MIF+RKGVK ++ K G+
Sbjct: 223 AYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGK 282
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E++Y E IN AVFPGLQGGPHNH I+G+AVALKQ T E+K YQ QV++N + +L
Sbjct: 283 EILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEAL 342
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPG 421
E GY +V+GG++NHL+LV+LR+KG DG R EKVLE+ IA NKNT PG
Sbjct: 343 TELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPG 391
>TAIR|locus:2035937 [details] [associations]
symbol:SHM7 "serine hydroxymethyltransferase 7"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:IAKLQWA HSSP:P07511
EMBL:BT002738 IPI:IPI00548548 RefSeq:NP_564473.1 UniGene:At.23145
ProteinModelPortal:Q84WV0 STRING:Q84WV0 PaxDb:Q84WV0 PRIDE:Q84WV0
EnsemblPlants:AT1G36370.1 GeneID:840543 KEGG:ath:AT1G36370
TAIR:At1g36370 InParanoid:Q84WV0 PhylomeDB:Q84WV0
ProtClustDB:PLN02271 ArrayExpress:Q84WV0 Genevestigator:Q84WV0
Uniprot:Q84WV0
Length = 598
Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
Identities = 233/442 (52%), Positives = 310/442 (70%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +G+ELI SENF +VM+A+GS +TNKYSEG PGARYY GN+YID E+LC +RA
Sbjct: 153 KQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIENLCIERA 212
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDT-KK 190
L AF L+ KWGVNVQ S + ANF VYT LL P ERIM LD P GGH+SHGY T KK
Sbjct: 213 LTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGERIMGLDSPSGGHMSHGYCTPGGKK 272
Query: 191 ISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCD 250
ISA SIFFE+ PY+++ TGYIDY++LE A +RPK+++ G S+Y R +D+AR+R++ D
Sbjct: 273 ISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPKILICGGSSYPRDWDFARVRQIAD 332
Query: 251 KQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQ 310
K AV++ DMAHISGLVA +PF++ D+VT+TTHK LRGPRG +IF+R+G K I KQ
Sbjct: 333 KCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTHKGLRGPRGGIIFYRRGPK-IRKQ 391
Query: 311 GQE-------VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLS 363
G Y E+KIN AVFP LQGGPHN+ I+ LA+ALKQV TPEYKAY +Q+
Sbjct: 392 GHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYIQQMKK 451
Query: 364 NSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV 423
N+ A +LL R LV+GGT+NHL+L +L G+ G EKV E HI NK + GD
Sbjct: 452 NAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGKVYEKVCEMCHITLNKTAIFGDN 511
Query: 424 SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMS 483
+ PGG+R+GTPA+T+RG +E DFE +A+F A ++ ++ + G K+FV +L +
Sbjct: 512 GTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQITSALQRE-HGKSHKEFVKSLCT 570
Query: 484 DESIQSEISNLRDKVEEYAKRF 505
++ +I+ LR++VE +A ++
Sbjct: 571 NK----DIAELRNRVEAFALQY 588
>TAIR|locus:2030581 [details] [associations]
symbol:SHM6 "serine hydroxymethyltransferase 6"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0006544
"glycine metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:AC069252 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN02271 EMBL:AY125514 EMBL:BT004532 IPI:IPI00534805
RefSeq:NP_173621.1 UniGene:At.41627 ProteinModelPortal:Q9LM59
SMR:Q9LM59 STRING:Q9LM59 PaxDb:Q9LM59 PRIDE:Q9LM59
EnsemblPlants:AT1G22020.1 GeneID:838807 KEGG:ath:AT1G22020
TAIR:At1g22020 InParanoid:Q9LM59 OMA:IFGAIGK PhylomeDB:Q9LM59
Genevestigator:Q9LM59 Uniprot:Q9LM59
Length = 599
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 234/510 (45%), Positives = 325/510 (63%)
Query: 16 NPIKRHLNHGSHYYVYMSSLP------DQALNNEKAPA-PWINQLNAXXXXXXXXXXXXX 68
+P+K G + Y SS P D + + +A W NQ
Sbjct: 97 HPMKLKRGRGGNSYSLASSSPCKRFVVDSGIESRRAVVRAWGNQ---SIEEADPEIHEFM 153
Query: 69 XXXKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQ 128
K RQ++G+ELI SENF +VM+A+GS +TNKYSEG PGARYY GN+YID E LCQ
Sbjct: 154 EKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIEILCQ 213
Query: 129 KRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDT 188
+RAL AF L+ KWGVNVQ S + ANF V+T LL P ERIM LD P GGH+SHGY T
Sbjct: 214 ERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGERIMGLDSPSGGHMSHGYYTPG 273
Query: 189 -KKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRK 247
KK+S SIFFE+ PY++D TGYIDY++LE+ A +RPK+++ G S+Y R +++ R R
Sbjct: 274 GKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPKILICGGSSYPRDWEFPRFRH 333
Query: 248 VCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVK-- 305
+ DK AV++ DMA ISGLVAA P+PF+Y D+VT+TTHKSLRGPRG +IF+++G+K
Sbjct: 334 IADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTHKSLRGPRGGIIFYKRGLKPK 393
Query: 306 ----EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQV 361
+N + Y +E+KIN +VFP LQGGPHN+ I+ LA+ALKQ +PEYK Y QV
Sbjct: 394 KQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAALAIALKQAASPEYKLYMRQV 453
Query: 362 LSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPG 421
N+ A +L+ R L++GGT+NHL+L +L G+ G EKV E HI NK +
Sbjct: 454 KKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFS 513
Query: 422 DVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATL 481
+ + PGG+R+G+PA+TSRG +E +FE +A+F A ++A + + G K+ + ++
Sbjct: 514 ENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQIASAAQRE-HGKLQKEPLKSI 572
Query: 482 MSDESIQSEISNLRDKVEEYAKRFPTVGFE 511
+ EI++LR++VE +A +F F+
Sbjct: 573 YHCK----EIADLRNQVEAFATQFAMPAFD 598
>UNIPROTKB|B4DPM9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0008168 GO:GO:0035999 EMBL:AC127537 GO:GO:0008732
GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264 HOVERGEN:HBG002807
UniGene:Hs.513987 UniGene:Hs.636044 HGNC:HGNC:10850 ChiTaRS:SHMT1
EMBL:AL353997 EMBL:AK298415 IPI:IPI01015924 SMR:B4DPM9
STRING:B4DPM9 Ensembl:ENST00000539052 Uniprot:B4DPM9
Length = 345
Score = 1056 (376.8 bits), Expect = 9.2e-107, P = 9.2e-107
Identities = 202/343 (58%), Positives = 262/343 (76%)
Query: 170 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229
M LDLP GGHL+HG+ TD KKISA SIFFE+MPY+++ TGYI+Y+QLE++A LF PKLI
Sbjct: 1 MGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLI 60
Query: 230 VAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 289
+AG S Y+R +YAR+RK+ D+ A ++ADMAHISGLVAAGV+PSPFE+ VVTTTTHK+
Sbjct: 61 IAGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKT 120
Query: 290 LRGPRGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ 348
LRG R MIF+RKGVK ++ K G+E++Y E IN AVFPGLQGGPHNH I+G+AVALKQ
Sbjct: 121 LRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQ 180
Query: 349 VKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE 408
T E+K YQ QV++N + +L E GY +V+GG++NHL+LV+LR+KG DG R EKVLE
Sbjct: 181 AMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLE 240
Query: 409 SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGD 468
+ IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF+KVA F ++L L+I+ D
Sbjct: 241 ACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSD 300
Query: 469 TKGTK--LKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVG 509
T G + LK+F L D+ Q+ + LR++VE +A FP G
Sbjct: 301 T-GVRATLKEFKERLAGDK-YQAAVQALREEVESFASLFPLPG 341
>GENEDB_PFALCIPARUM|PFL1720w [details] [associations]
symbol:PFL1720w "Serine
hydroxymethyltransferase" species:5833 "Plasmodium falciparum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006730
"one-carbon metabolic process" evidence=TAS] HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00464 PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 200/435 (45%), Positives = 282/435 (64%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ + + LI SEN T+ +V + +G ++NKYSEGYP RYYGGN+Y+D E LC KRA
Sbjct: 22 KNRQIETINLIASENLTNTAVRECLGDRISNKYSEGYPHKRYYGGNDYVDKIEELCYKRA 81
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF + +WGVNVQ LSGS AN Q AL+ +IM + L GGHL+HG+ + KK+
Sbjct: 82 LEAFNVSEEEWGVNVQPLSGSAANVQALYALVGVKGKIMGMHLCSGGHLTHGFFDEKKKV 141
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
S S FE+ Y+ + S GY+D E + A F+PK+I+ G ++Y R DY R++CD+
Sbjct: 142 SITSDLFESKLYKCN-SEGYVDMESVRNLALSFQPKVIICGYTSYPRDIDYKGFREICDE 200
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A + AD++HIS VA ++ +PF YADVVTTTTHK LRGPR A+IFF K K+
Sbjct: 201 VNAYLFADISHISSFVACNLLNNPFTYADVVTTTTHKILRGPRSALIFFNK------KRN 254
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+ + KIN +VFP QGGPHN+ I+ +A LK+V TP +K Y +QVL NS A
Sbjct: 255 PGI----DQKINSSVFPSFQGGPHNNKIAAVACQLKEVNTPFFKEYTKQVLLNSKALAEC 310
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
LL+R DLV+ GT+NHL++V+LR I GS++++ +++IA NKNT+P DV + P GI
Sbjct: 311 LLKRNLDLVTNGTDNHLIVVDLRKYNITGSKLQETCNAINIALNKNTIPSDVDCVSPSGI 370
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEI 491
R+GTPALT+RG E+D E +A+ A+ L +++ G KL DF L+++ +I
Sbjct: 371 RIGTPALTTRGCKEKDMEFIADMLLKAILLTDELQ-QKYGKKLVDFKKGLVNNP----KI 425
Query: 492 SNLRDKVEEYAKRFP 506
L+ +V ++AK P
Sbjct: 426 DELKKEVVQWAKNLP 440
>UNIPROTKB|Q8I566 [details] [associations]
symbol:PFL1720w "Serine hydroxymethyltransferase"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006730 "one-carbon metabolic
process" evidence=TAS] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 200/435 (45%), Positives = 282/435 (64%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ + + LI SEN T+ +V + +G ++NKYSEGYP RYYGGN+Y+D E LC KRA
Sbjct: 22 KNRQIETINLIASENLTNTAVRECLGDRISNKYSEGYPHKRYYGGNDYVDKIEELCYKRA 81
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF + +WGVNVQ LSGS AN Q AL+ +IM + L GGHL+HG+ + KK+
Sbjct: 82 LEAFNVSEEEWGVNVQPLSGSAANVQALYALVGVKGKIMGMHLCSGGHLTHGFFDEKKKV 141
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
S S FE+ Y+ + S GY+D E + A F+PK+I+ G ++Y R DY R++CD+
Sbjct: 142 SITSDLFESKLYKCN-SEGYVDMESVRNLALSFQPKVIICGYTSYPRDIDYKGFREICDE 200
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A + AD++HIS VA ++ +PF YADVVTTTTHK LRGPR A+IFF K K+
Sbjct: 201 VNAYLFADISHISSFVACNLLNNPFTYADVVTTTTHKILRGPRSALIFFNK------KRN 254
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
+ + KIN +VFP QGGPHN+ I+ +A LK+V TP +K Y +QVL NS A
Sbjct: 255 PGI----DQKINSSVFPSFQGGPHNNKIAAVACQLKEVNTPFFKEYTKQVLLNSKALAEC 310
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431
LL+R DLV+ GT+NHL++V+LR I GS++++ +++IA NKNT+P DV + P GI
Sbjct: 311 LLKRNLDLVTNGTDNHLIVVDLRKYNITGSKLQETCNAINIALNKNTIPSDVDCVSPSGI 370
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEI 491
R+GTPALT+RG E+D E +A+ A+ L +++ G KL DF L+++ +I
Sbjct: 371 RIGTPALTTRGCKEKDMEFIADMLLKAILLTDELQ-QKYGKKLVDFKKGLVNNP----KI 425
Query: 492 SNLRDKVEEYAKRFP 506
L+ +V ++AK P
Sbjct: 426 DELKKEVVQWAKNLP 440
>UNIPROTKB|B4DLV4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 EMBL:CH471054 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807
EMBL:AC137834 UniGene:Hs.741179 HGNC:HGNC:10852 ChiTaRS:SHMT2
EMBL:AK297173 IPI:IPI00794549 SMR:B4DLV4 STRING:B4DLV4
Ensembl:ENST00000393827 UCSC:uc001snj.2 Uniprot:B4DLV4
Length = 408
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 190/335 (56%), Positives = 245/335 (73%)
Query: 181 SHGYQT--DTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYAR 238
S GYQ + + +S + + TG IDY QL +A LFRP+LI+AG SAYAR
Sbjct: 75 SSGYQPRPSSSSLCPISSTALAVCVSVQPKTGLIDYNQLALTARLFRPRLIIAGTSAYAR 134
Query: 239 LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 298
L DYAR+R+VCD+ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+LRG R +I
Sbjct: 135 LIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLI 194
Query: 299 FFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357
F+RKGVK ++ K G+E+ Y +ED+IN AVFP LQGGPHNH I+ +AVALKQ TP ++ Y
Sbjct: 195 FYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREY 254
Query: 358 QEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKN 417
QVL N+ A +LLERGY LVSGGT+NHLVLV+LR KG+DG+R E+VLE V I ANKN
Sbjct: 255 SLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKN 314
Query: 418 TVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDF 477
T PGD SA+ PGG+R+G PALTSR F E+DF +V +F D V + L++K T KL+DF
Sbjct: 315 TCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKT--AKLQDF 372
Query: 478 VATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEK 512
+ L+ D ++NLR +VE++A+ FP GF++
Sbjct: 373 KSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 407
>UNIPROTKB|Q4KLG7 [details] [associations]
symbol:Shmt1 "Serine hydroxymethyltransferase"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
RGD:1312011 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 EMBL:BC099219
IPI:IPI00627076 UniGene:Rn.3684 STRING:Q4KLG7
Ensembl:ENSRNOT00000057973 OMA:MTPEFKL Genevestigator:Q4KLG7
Uniprot:Q4KLG7
Length = 352
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 175/303 (57%), Positives = 224/303 (73%)
Query: 209 TGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVA 268
TGYI+Y+QLE++A+LF PKLI+AG S Y+R DYAR+RK+ D A ++ADMAHISGLVA
Sbjct: 46 TGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVA 105
Query: 269 AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVF 327
AGV+PSPFE+ VVTTTTHK+LRG R MIF+RKGV+ ++ K G+E Y E IN AVF
Sbjct: 106 AGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGEETYYELESLINSAVF 165
Query: 328 PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENH 387
PGLQGGPHNH I+G+AVALKQ T E+K YQ QVL+N + +L E GY +V+GG++NH
Sbjct: 166 PGLQGGPHNHAIAGVAVALKQAMTTEFKIYQLQVLANCRALSDALTELGYKIVTGGSDNH 225
Query: 388 LVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEED 447
L+L++LR KG DG R EKVLE+ IA NKNT PGD SA+ P G+R+GTPALTSRG +EED
Sbjct: 226 LILMDLRPKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEED 285
Query: 448 FEKVAEFFDAAVKLALKIKGD-TKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFP 506
F+K+A F ++L L+I+ T LK+F L DE QS ++ LR++VE +A F
Sbjct: 286 FQKIAHFIHRGIELTLQIQSHMTMRATLKEFKEKLTGDEKFQSAVAALREEVENFASNFS 345
Query: 507 TVG 509
G
Sbjct: 346 LPG 348
>UNIPROTKB|P0A825 [details] [associations]
symbol:glyA species:83333 "Escherichia coli K-12"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0006565 "L-serine
catabolic process" evidence=IDA] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA;IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005829
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0035999 GO:GO:0006546 GO:GO:0006565
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 ProtClustDB:PRK00011 OMA:GKIDYED EMBL:V00283
EMBL:J01620 PIR:A00559 RefSeq:NP_417046.1 RefSeq:YP_490779.1
PDB:1DFO PDB:1EQB PDB:3G8M PDBsum:1DFO PDBsum:1EQB PDBsum:3G8M
ProteinModelPortal:P0A825 SMR:P0A825 DIP:DIP-36205N IntAct:P0A825
MINT:MINT-7293373 SWISS-2DPAGE:P0A825 PaxDb:P0A825 PRIDE:P0A825
EnsemblBacteria:EBESCT00000003405 EnsemblBacteria:EBESCT00000017377
GeneID:12932320 GeneID:947022 KEGG:ecj:Y75_p2504 KEGG:eco:b2551
PATRIC:32120501 EchoBASE:EB0403 EcoGene:EG10408
BioCyc:EcoCyc:GLYOHMETRANS-MONOMER BioCyc:ECOL316407:JW2535-MONOMER
BioCyc:MetaCyc:GLYOHMETRANS-MONOMER EvolutionaryTrace:P0A825
Genevestigator:P0A825 GO:GO:0019264 Uniprot:P0A825
Length = 417
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 188/382 (49%), Positives = 250/382 (65%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E L RA
Sbjct: 23 KVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRA 82
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
+ F D A NVQ SGS ANF VYTALL+P + ++ ++L HGGHL+HG +
Sbjct: 83 KELFGADYA----NVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHG-----SPV 133
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
+ + +PY +D +TG+IDY LEK A +PK+I+ G SAY+ + D+A++R++ D
Sbjct: 134 NFSGKLYNIVPYGID-ATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADS 192
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311
A + DMAH++GLVAAGV P+P +A VVTTTTHK+L GPRG +I + G +E+ K
Sbjct: 193 IGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYK-- 250
Query: 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371
K+N AVFPG QGGP H I+G AVALK+ PE+K YQ+QV N+
Sbjct: 251 ---------KLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEV 301
Query: 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGG 430
LERGY +VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V G
Sbjct: 302 FLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSG 361
Query: 431 IRMGTPALTSRGFVEEDFEKVA 452
IR+GTPA+T RGF E + +++A
Sbjct: 362 IRVGTPAITRRGFKEAEAKELA 383
>TIGR_CMR|GSU_1607 [details] [associations]
symbol:GSU_1607 "serine hydroxymethyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239405
RefSeq:NP_952658.1 ProteinModelPortal:Q74CR5 SMR:Q74CR5
PRIDE:Q74CR5 GeneID:2685603 KEGG:gsu:GSU1607 PATRIC:22026061
OMA:IAKLQWA BioCyc:GSUL243231:GH27-1559-MONOMER Uniprot:Q74CR5
Length = 415
Score = 877 (313.8 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 193/410 (47%), Positives = 254/410 (61%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ LELI SENF S +V++A GSVMTNKY+EGYPG RYYGG ++D+ E+L +RA +
Sbjct: 21 RQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRYYGGCHHVDVVENLAIERAKE 80
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F D A NVQ SGS AN VY ++LKP + I+ ++L HGGHL+HG ++
Sbjct: 81 LFGADHA----NVQPHSGSQANMAVYFSVLKPGDTILGMNLSHGGHLTHG-----SPVNF 131
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
FF +PY + + T ID+ ++E+ A +PK+IV GASAY R D+A R + DK
Sbjct: 132 SGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIVVGASAYPRTIDFAAFRIIADKVG 191
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
AV++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+
Sbjct: 192 AVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCRE----------- 240
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
Y +N +FPG+QGGP H I+ AVALK+ PE+KAYQ Q++ N+ A L+
Sbjct: 241 ---EYAKTLNSNIFPGIQGGPLMHVIAAKAVALKEALQPEFKAYQAQIVKNAKALADELV 297
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIR 432
+RG+ LVSGGT+NHL+LVNL + G E+ L+ I NKNTVP + S V G R
Sbjct: 298 KRGFRLVSGGTDNHLMLVNLTGTELTGKVAEESLDKAGITVNKNTVPFETRSPFVTSGFR 357
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLM 482
+GTPA T+ G E + VA F A LA + D K ++K V LM
Sbjct: 358 IGTPAATTHGLKEAEMADVAGFIAEA--LA-NVDNDAKLAEIKGRVNVLM 404
Score = 43 (20.2 bits), Expect = 2.7e-90, Sum P(2) = 2.7e-90
Identities = 7/30 (23%), Positives = 18/30 (60%)
Query: 477 FVATLMSDESIQSEISNLRDKVEEYAKRFP 506
F+A +++ ++++ ++ +V KRFP
Sbjct: 379 FIAEALANVDNDAKLAEIKGRVNVLMKRFP 408
>UNIPROTKB|H0YIZ0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 Ensembl:ENST00000557529 Uniprot:H0YIZ0
Length = 264
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 168/261 (64%), Positives = 207/261 (79%)
Query: 210 GYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAA 269
G IDY QL +A LFRP+LI+AG SAYARL DYAR+R+VCD+ KA +LADMAHISGLVAA
Sbjct: 2 GLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAA 61
Query: 270 GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFP 328
VIPSPF++AD+VTTTTHK+LRG R +IF+RKGVK ++ K G+E+ Y +ED+IN AVFP
Sbjct: 62 KVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFP 121
Query: 329 GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHL 388
LQGGPHNH I+ +AVALKQ TP ++ Y QVL N+ A +LLERGY LVSGGT+NHL
Sbjct: 122 SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHL 181
Query: 389 VLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF 448
VLV+LR KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF
Sbjct: 182 VLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDF 241
Query: 449 EKVAEFFDAAVKLALKIKGDT 469
+V +F D V + L++K T
Sbjct: 242 RRVVDFIDEGVNIGLEVKSKT 262
>UNIPROTKB|Q9KTG1 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 186/403 (46%), Positives = 252/403 (62%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D AE+L RA
Sbjct: 25 RQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDKAEALAIDRACQ 84
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F + A NVQ SGS AN VY ALL P + ++ + L HGGHL+HG ++
Sbjct: 85 LFGCEYA----NVQPHSGSQANSAVYMALLNPGDTVLGMSLAHGGHLTHG-----SPVNF 135
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+ +PY +DE+ G I+Y+++E A +PK+I+ G SAY+++ D+ R+R++ DK
Sbjct: 136 SGKHYNVIPYGIDEA-GQINYDEMEALALEHKPKMIIGGFSAYSQIVDWKRMREIADKVG 194
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A + DMAH++GL+AAGV PSP +A VVTTTTHK+L GPRG +I ++ G+E
Sbjct: 195 AYLFVDMAHVAGLIAAGVYPSPVPFAHVVTTTTHKTLAGPRGGLI--------LSNAGEE 246
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
MY K+N AVFPG QGGP H I+ AVA K+ PE+K YQ +V+ N+
Sbjct: 247 -MYK---KLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKEYQARVVKNAKAMVAQFQ 302
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIR 432
ERGY +VS TENHL LV+L +K I G + L + +I NKN+VP D S V GIR
Sbjct: 303 ERGYKIVSNSTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSGIR 362
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLK 475
+GTPA+T RGF E+D + +A + V + +G + TK K
Sbjct: 363 VGTPAITRRGFTEQDAKDLANWM-CDVLDNINDQGVIEATKQK 404
>TIGR_CMR|VC_0941 [details] [associations]
symbol:VC_0941 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 186/403 (46%), Positives = 252/403 (62%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D AE+L RA
Sbjct: 25 RQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDKAEALAIDRACQ 84
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F + A NVQ SGS AN VY ALL P + ++ + L HGGHL+HG ++
Sbjct: 85 LFGCEYA----NVQPHSGSQANSAVYMALLNPGDTVLGMSLAHGGHLTHG-----SPVNF 135
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+ +PY +DE+ G I+Y+++E A +PK+I+ G SAY+++ D+ R+R++ DK
Sbjct: 136 SGKHYNVIPYGIDEA-GQINYDEMEALALEHKPKMIIGGFSAYSQIVDWKRMREIADKVG 194
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A + DMAH++GL+AAGV PSP +A VVTTTTHK+L GPRG +I ++ G+E
Sbjct: 195 AYLFVDMAHVAGLIAAGVYPSPVPFAHVVTTTTHKTLAGPRGGLI--------LSNAGEE 246
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
MY K+N AVFPG QGGP H I+ AVA K+ PE+K YQ +V+ N+
Sbjct: 247 -MYK---KLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKEYQARVVKNAKAMVAQFQ 302
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIR 432
ERGY +VS TENHL LV+L +K I G + L + +I NKN+VP D S V GIR
Sbjct: 303 ERGYKIVSNSTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSGIR 362
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLK 475
+GTPA+T RGF E+D + +A + V + +G + TK K
Sbjct: 363 VGTPAITRRGFTEQDAKDLANWM-CDVLDNINDQGVIEATKQK 404
>TIGR_CMR|CPS_2477 [details] [associations]
symbol:CPS_2477 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_269193.1 ProteinModelPortal:Q481S6 SMR:Q481S6
STRING:Q481S6 PRIDE:Q481S6 GeneID:3520009 KEGG:cps:CPS_2477
PATRIC:21468023 BioCyc:CPSY167879:GI48-2540-MONOMER Uniprot:Q481S6
Length = 417
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 182/375 (48%), Positives = 242/375 (64%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++D+ E L RA +
Sbjct: 25 RQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRAKE 84
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F D A NVQ SGS AN V+ ALLKP E ++ + L HGGHL+HG K+S
Sbjct: 85 LFGADYA----NVQPHSGSQANAAVFMALLKPGETVLGMSLAHGGHLTHG-----SKVSF 135
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+ + Y L+E+TG IDYE++E+ A +PK+I+AG SAY+R+ D+ R R + D
Sbjct: 136 SGKIYNAVQYGLNEATGEIDYEEVERLAKEHQPKMIIAGFSAYSRVVDWQRFRDIADSIG 195
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A + DMAH++GLVAAG+ P+P ADVVTTTTHK+LRGPRG +I + KQ E
Sbjct: 196 AWLFVDMAHVAGLVAAGLYPNPVPIADVVTTTTHKTLRGPRGGLI--------LAKQNDE 247
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
+ K+N AVFP QGGP H I+ A+ K+ Y YQ+QV+ N+ + A++
Sbjct: 248 LA----KKLNSAVFPAGQGGPLMHVIAAKAICFKEALGEGYVEYQQQVIDNAREMAKTFQ 303
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIR 432
RGY++VSGGT+NHL L++L +KGI G + L +I NKN+VP D S V G+R
Sbjct: 304 TRGYNVVSGGTDNHLFLLDLIDKGITGKDADAALGRANITVNKNSVPNDPQSPFVTSGLR 363
Query: 433 MGTPALTSRGF-VEE 446
+GTPA+TSRGF +EE
Sbjct: 364 IGTPAITSRGFGLEE 378
>TIGR_CMR|CHY_2557 [details] [associations]
symbol:CHY_2557 "serine hydroxymethyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006544 "glycine metabolic process" evidence=ISS]
[GO:0006553 "lysine metabolic process" evidence=ISS] [GO:0006563
"L-serine metabolic process" evidence=ISS] [GO:0006566 "threonine
metabolic process" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0006760 "folic acid-containing compound
metabolic process" evidence=ISS] [GO:0015947 "methane metabolic
process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 RefSeq:YP_361350.1 ProteinModelPortal:Q3A934
SMR:Q3A934 STRING:Q3A934 GeneID:3728195 KEGG:chy:CHY_2557
PATRIC:21278163 HOGENOM:HOG000239403 OMA:GLLSDPM
BioCyc:CHYD246194:GJCN-2556-MONOMER Uniprot:Q3A934
Length = 421
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 173/389 (44%), Positives = 254/389 (65%)
Query: 73 ARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 132
+RQ + +ELI SENF S +VM+A+GS +TNKY+EG PG RYYGG EY+D+ E+L ++RA
Sbjct: 24 SRQREKIELIASENFVSRAVMEAMGSHLTNKYAEGLPGKRYYGGCEYVDVVENLARERAK 83
Query: 133 DAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKIS 192
F + VNVQ SG+ AN Y A L+P + ++ ++L HGGHL+HG ++
Sbjct: 84 KLFGAEH----VNVQPHSGAQANMAAYMAFLEPGDTVLGMNLAHGGHLTHG-----SPVN 134
Query: 193 AVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ 252
+ + Y ++ T I+YE++ + A +PK+IVAGASAY R+ D+ ++++ D+
Sbjct: 135 FSGKLYNFVSYGVEPDTEKINYEKVFELAYKHKPKMIVAGASAYPRVIDFKHLKEIADEV 194
Query: 253 KAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQ 312
A ++ DMAHI+GLVAAG+ PSP YADVVTTTTHK+LRGPRG +IF +
Sbjct: 195 GAYLMVDMAHIAGLVAAGLHPSPIPYADVVTTTTHKTLRGPRGGVIFCKA---------- 244
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
+ KI++ VFPG+QGGP H I+ AVA K+ +PE++ YQ+QV++N+ A L
Sbjct: 245 ----EHAAKIDKTVFPGVQGGPLMHVIAAKAVAFKEALSPEFREYQQQVVNNAKALAEEL 300
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGI 431
++G LVSGGT+NHL+LV++R G+ G R E++L+ + + NKN +P D S V GI
Sbjct: 301 KKQGLRLVSGGTDNHLMLVDVRPVGLTGKRAEQLLDEIGVTVNKNAIPYDPESPNVTSGI 360
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVK 460
R+GTPA+T+RG E + ++AE +K
Sbjct: 361 RIGTPAVTTRGMKEGEMAEIAEIIALVLK 389
>TIGR_CMR|CPS_4031 [details] [associations]
symbol:CPS_4031 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_270689.1 ProteinModelPortal:Q47WY2 SMR:Q47WY2
STRING:Q47WY2 GeneID:3519081 KEGG:cps:CPS_4031 PATRIC:21470941
OMA:VKINAQV BioCyc:CPSY167879:GI48-4044-MONOMER Uniprot:Q47WY2
Length = 417
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 180/375 (48%), Positives = 240/375 (64%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG E++D+ E L RA +
Sbjct: 25 RQQDHVELIASENYTSARVMQAQGSQLTNKYAEGYPGKRYYGGCEHVDVIEQLAIDRAKE 84
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F D A NVQ SGS AN V+ ALLKP E ++ + L HGGHL+HG K+S
Sbjct: 85 LFGADYA----NVQPHSGSQANAAVFMALLKPGETVLGMSLAHGGHLTHG-----SKVSF 135
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+ + Y L+E TG IDY+++ + A +PK+I+AG SAY+R+ D+ R R + D
Sbjct: 136 SGKIYNAVQYGLNEVTGEIDYDEVARLAKEHQPKMIIAGFSAYSRVVDWQRFRDIADSIG 195
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A + DMAH++GLVAAG+ P+P ADVVTTTTHK+LRGPRG +I + KQ E
Sbjct: 196 AWLFVDMAHVAGLVAAGLYPNPVPIADVVTTTTHKTLRGPRGGLI--------LAKQNDE 247
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
+ K+N AVFP QGGP H I+ A+ K+ Y YQ+QV+ N+ + A++
Sbjct: 248 LA----KKLNSAVFPAGQGGPLMHVIAAKAICFKEALGEGYVEYQQQVIDNAREMAKTFQ 303
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIR 432
RGY++VSGGT+NHL L++L +KGI G + L +I NKN+VP D S V G+R
Sbjct: 304 TRGYNVVSGGTDNHLFLLDLIDKGITGKDADAALGRANITVNKNSVPNDPQSPFVTSGLR 363
Query: 433 MGTPALTSRGF-VEE 446
+GTPA+TSRGF +EE
Sbjct: 364 IGTPAITSRGFGLEE 378
>TIGR_CMR|CPS_0728 [details] [associations]
symbol:CPS_0728 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
RefSeq:YP_267478.1 ProteinModelPortal:Q488N6 SMR:Q488N6
STRING:Q488N6 PRIDE:Q488N6 GeneID:3519747 KEGG:cps:CPS_0728
PATRIC:21464771 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
OMA:AICAKFP BioCyc:CPSY167879:GI48-815-MONOMER GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 Uniprot:Q488N6
Length = 419
Score = 812 (290.9 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 175/375 (46%), Positives = 237/375 (63%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + +ELI SEN+ S V++A GS +TNKY+EGYPG RYYGG EY+D+AE L RA +
Sbjct: 25 RQEEHIELIASENYCSPRVLEAQGSQLTNKYAEGYPGKRYYGGCEYVDIAEQLAIDRAKE 84
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F A NVQ +GS AN V+ AL+ P +++ + L HGGHL+HG S
Sbjct: 85 LFGATYA----NVQPHAGSQANAAVFQALVTPGGKVLGMSLAHGGHLTHGSHVS---FSG 137
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
S +E Y L TG IDYE+LE+ A +P++I+ G SA++ + D+AR+R + DK
Sbjct: 138 KS--YEAFQYGLHPETGDIDYEELERLAVEHKPEMIIGGFSAFSGVVDWARMRTIADKVG 195
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A DMAH++GL+AAG+ P+P +A VVTTTTHK+L GPRG +I G + E
Sbjct: 196 AYFFVDMAHVAGLIAAGLYPNPVPHAHVVTTTTHKTLAGPRGGLII--SGCDD------E 247
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
+Y K+N AVFPG QGGP H I+ AVA K+ +PE+K YQ+ VL+N+ L
Sbjct: 248 AIYK---KLNSAVFPGGQGGPLMHIIAAKAVAFKEALSPEFKVYQQNVLANALAMVDVLQ 304
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIR 432
+RGY +VS GT+NHL+L++L +K I G + L HI NKN+VP D S V G+R
Sbjct: 305 DRGYKVVSNGTQNHLLLLDLIDKDITGKDADAALGKAHITVNKNSVPNDPRSPFVTSGLR 364
Query: 433 MGTPALTSRGF-VEE 446
+GTPA+T RGF +EE
Sbjct: 365 LGTPAITRRGFGIEE 379
Score = 43 (20.2 bits), Expect = 1.9e-83, Sum P(2) = 1.9e-83
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 472 TK-LKDFVATLMSDESIQSEISNLRDKVEEYAKRFP 506
TK L ++ ++ D + ++D+V+E RFP
Sbjct: 380 TKALTGWICDILDDIENEDVSKRVQDQVKELCARFP 415
>TIGR_CMR|CJE_0451 [details] [associations]
symbol:CJE_0451 "serine hydroxymethyltransferase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK13034 HOGENOM:HOG000239405
RefSeq:YP_178470.1 ProteinModelPortal:Q5HW65 SMR:Q5HW65
STRING:Q5HW65 PRIDE:Q5HW65 GeneID:3231213 KEGG:cjr:CJE0451
PATRIC:20042602 OMA:ALATWIC BioCyc:CJEJ195099:GJC0-456-MONOMER
Uniprot:Q5HW65
Length = 414
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 178/382 (46%), Positives = 249/382 (65%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ +GLE+I SENFT VM+ +GS++TNKY+EGYPG RYYGG E++D E+L +R
Sbjct: 20 RQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKK 79
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F K+ NVQ SGS AN VY AL+ P ++I+ +DL HGGHL+HG K+S+
Sbjct: 80 LFN---CKFA-NVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHG-----AKVSS 130
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+E+ Y + E G IDYE++ + A +PKLIV GASAYAR+ D+A+ R++ D+
Sbjct: 131 SGKMYESCFYGV-ELDGRIDYEKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEVG 189
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A + AD+AHI+GLV AG PSPF +A VV++TTHK+LRGPRG +I +E+ K
Sbjct: 190 AYLFADIAHIAGLVVAGEHPSPFPHAHVVSSTTHKTLRGPRGGIIMTND--EELAK---- 243
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
KIN A+FPG+QGGP H I+ AV K + E+K Y +QV +N+ A L+
Sbjct: 244 -------KINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLM 296
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIR 432
+R + LVS GT+NHLVL++ ++ G + L + I ANKNTVPG++ S + G+R
Sbjct: 297 DRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLR 356
Query: 433 MGTPALTSRGFVEEDFEKVAEF 454
+GTPALT+RGF E++ E V+ +
Sbjct: 357 LGTPALTARGFKEKEMEIVSNY 378
>UNIPROTKB|G3V2Y4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006564 "L-serine biosynthetic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0051289 "protein homotetramerization" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0005743 GO:GO:0005758
GO:GO:0005759 GO:GO:0008284 GO:GO:0016597 GO:GO:0051289
GO:GO:0035999 GO:GO:0006564 GO:GO:0008732 GO:GO:0004372
PANTHER:PTHR11680 GO:GO:0019264 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 ProteinModelPortal:G3V2Y4 SMR:G3V2Y4
Ensembl:ENST00000555634 ArrayExpress:G3V2Y4 Bgee:G3V2Y4
Uniprot:G3V2Y4
Length = 234
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 157/234 (67%), Positives = 192/234 (82%)
Query: 170 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229
M LDLP GGHL+HGY +D K+ISA SIFFE+MPY+L+ TG IDY QL +A LFRP+LI
Sbjct: 1 MGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLI 60
Query: 230 VAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 289
+AG SAYARL DYAR+R+VCD+ KA +LADMAHISGLVAA VIPSPF++AD+VTTTTHK+
Sbjct: 61 IAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKT 120
Query: 290 LRGPRGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ 348
LRG R +IF+RKGVK ++ K G+E+ Y +ED+IN AVFP LQGGPHNH I+ +AVALKQ
Sbjct: 121 LRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 180
Query: 349 VKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSR 402
TP ++ Y QVL N+ A +LLERGY LVSGGT+NHLVLV+LR KG+DG+R
Sbjct: 181 ACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGAR 234
>TIGR_CMR|SPO_1572 [details] [associations]
symbol:SPO_1572 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 183/406 (45%), Positives = 246/406 (60%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ +ELI SEN S +VMQA GSVMTNKY+EGYPG RYYGG +Y+D+AE+L +RA
Sbjct: 32 RQRDEIELIASENIVSAAVMQAQGSVMTNKYAEGYPGRRYYGGCQYVDIAENLAIERAKQ 91
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F A NVQ SGS AN V+ AL+KP + I+ + L GGHL+HG +
Sbjct: 92 LFGCGFA----NVQPNSGSQANQGVFQALIKPGDTILGMSLDAGGHLTHGAAPNQS---- 143
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+F + Y + + +DY+Q+E A RPKLI+AG SA R D+AR+R++ D
Sbjct: 144 -GKWFNAVQYGVRQQDNLLDYDQVEALAKEHRPKLIIAGGSAIPRQIDFARMREIADMVG 202
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A + DMAH +GLVAAG PSPF +A V TTTTHK+LRGPRG MI ++I K
Sbjct: 203 AYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLRGPRGGMILTND--EDIAK---- 256
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
K+N A+FPG+QGGP H I+ AVA + PE+K Y +QV++N+ + L+
Sbjct: 257 -------KVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKTYIQQVIANAQALSDQLI 309
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-MVPGGIR 432
+ G D V+ GT+ H+VLV+LR KG+ G+ EK L HI NKN VP D V GIR
Sbjct: 310 KGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPEKPTVTSGIR 369
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFV 478
+G+PA T+RGF E +F ++A++ V L G+ ++D V
Sbjct: 370 LGSPAGTTRGFAETEFRQIADWIIEVVD-GLAANGEDANEAVEDKV 414
>TIGR_CMR|SPO_2940 [details] [associations]
symbol:SPO_2940 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 183/406 (45%), Positives = 246/406 (60%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ +ELI SEN S +VMQA GSVMTNKY+EGYPG RYYGG +Y+D+AE+L +RA
Sbjct: 32 RQRDEIELIASENIVSAAVMQAQGSVMTNKYAEGYPGRRYYGGCQYVDIAENLAIERAKQ 91
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F A NVQ SGS AN V+ AL+KP + I+ + L GGHL+HG +
Sbjct: 92 LFGCGFA----NVQPNSGSQANQGVFQALIKPGDTILGMSLDAGGHLTHGAAPNQS---- 143
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+F + Y + + +DY+Q+E A RPKLI+AG SA R D+AR+R++ D
Sbjct: 144 -GKWFNAVQYGVRQQDNLLDYDQVEALAKEHRPKLIIAGGSAIPRQIDFARMREIADMVG 202
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A + DMAH +GLVAAG PSPF +A V TTTTHK+LRGPRG MI ++I K
Sbjct: 203 AYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLRGPRGGMILTND--EDIAK---- 256
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
K+N A+FPG+QGGP H I+ AVA + PE+K Y +QV++N+ + L+
Sbjct: 257 -------KVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKTYIQQVIANAQALSDQLI 309
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-MVPGGIR 432
+ G D V+ GT+ H+VLV+LR KG+ G+ EK L HI NKN VP D V GIR
Sbjct: 310 KGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPEKPTVTSGIR 369
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFV 478
+G+PA T+RGF E +F ++A++ V L G+ ++D V
Sbjct: 370 LGSPAGTTRGFAETEFRQIADWIIEVVD-GLAANGEDANEAVEDKV 414
>TIGR_CMR|BA_5558 [details] [associations]
symbol:BA_5558 "serine hydroxymethyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 RefSeq:NP_847716.1
RefSeq:YP_022227.1 RefSeq:YP_031404.1 ProteinModelPortal:Q81JY4
SMR:Q81JY4 PRIDE:Q81JY4 DNASU:1085246
EnsemblBacteria:EBBACT00000011325 EnsemblBacteria:EBBACT00000016380
EnsemblBacteria:EBBACT00000022066 GeneID:1085246 GeneID:2820074
GeneID:2851919 KEGG:ban:BA_5558 KEGG:bar:GBAA_5558 KEGG:bat:BAS5165
HOGENOM:HOG000239405 OMA:CREAHAK
BioCyc:BANT260799:GJAJ-5240-MONOMER
BioCyc:BANT261594:GJ7F-5419-MONOMER Uniprot:Q81JY4
Length = 413
Score = 796 (285.3 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 169/388 (43%), Positives = 244/388 (62%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ +ELI SENF S +VM+A GSV+TNKY+EGYPG RYYGG E++D+ E + + R +
Sbjct: 21 RQRSKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCEHVDVVEDIARDRVKE 80
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F + VNVQ SG+ AN VY +L+ + ++ ++L HGGHL+HG + S
Sbjct: 81 IFGAEH----VNVQPHSGAQANMAVYFTILEQGDTVLGMNLSHGGHLTHGSPVN---FSG 133
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
V F + Y +D + I+Y+ + A +PKLIVAGASAY R+ D+ R R++ D+
Sbjct: 134 VQYNF--VEYGVDAESHCINYDDVLAKAKEHKPKLIVAGASAYPRVIDFKRFREIADEVG 191
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A ++ DMAHI+GLVAAG+ P+P +A VTTTTHK+LRGPRG MI + + KQ
Sbjct: 192 AYLMVDMAHIAGLVAAGLHPNPVPHAHFVTTTTHKTLRGPRGGMILCEE---QFAKQ--- 245
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
I++++FPG+QGGP H I+ AVA + ++K Y + +++N+++ A L
Sbjct: 246 --------IDKSIFPGIQGGPLMHVIAAKAVAFGEALQDDFKTYAQNIINNANRLAEGLQ 297
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIR 432
+ G LVSGGT+NHL+L+++RN I G E VL+ V I NKNT+P + S V G+R
Sbjct: 298 KEGLTLVSGGTDNHLILIDVRNLEITGKVAEHVLDEVGITVNKNTIPFETASPFVTSGVR 357
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVK 460
+GT A+TSRGF ED +++A +K
Sbjct: 358 IGTAAVTSRGFGLEDMDEIASLIAYTLK 385
Score = 41 (19.5 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 448 FEKVAEFFDAAVKLALKIKGDTKGTKLKDF--VATLMS----DESIQSEISNLRDKVEEY 501
FE + F + V++ ++G L+D +A+L++ + ++ + R +VE
Sbjct: 345 FETASPFVTSGVRIGTAAV-TSRGFGLEDMDEIASLIAYTLKNHENEAALEEARKRVEAL 403
Query: 502 AKRFP 506
+FP
Sbjct: 404 TSKFP 408
>UNIPROTKB|O53441 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA] [GO:0006563
"L-serine metabolic process" evidence=IDA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IDA] [GO:0042783 "active evasion of
host immune response" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005886
GO:GO:0005737 GO:GO:0005618 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006544 GO:GO:0035999 GO:GO:0042783
GO:GO:0006545 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 PIR:C70896
RefSeq:NP_335569.1 RefSeq:YP_006514462.1 PDB:1LXB PDB:3H7F
PDBsum:1LXB PDBsum:3H7F ProteinModelPortal:O53441 SMR:O53441
PRIDE:O53441 EnsemblBacteria:EBMYCT00000001613
EnsemblBacteria:EBMYCT00000071670 GeneID:13319665 GeneID:924979
KEGG:mtc:MT1125 KEGG:mtu:Rv1093 KEGG:mtv:RVBD_1093 PATRIC:18124236
TubercuList:Rv1093 OMA:PETHRID ProtClustDB:PRK00011 BRENDA:2.1.2.1
EvolutionaryTrace:O53441 Uniprot:O53441
Length = 426
Score = 765 (274.4 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 177/392 (45%), Positives = 238/392 (60%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ LE+I SENF +V+QA GSV+TNKY+EG PG RYYGG E++D+ E+L + RA
Sbjct: 22 RQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKA 81
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F + A NVQ SG+ AN V AL+ P ER++ LDL +GGHL+HG +++
Sbjct: 82 LFGAEFA----NVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNF 132
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+E Y +D +T ID + + +A FRPK+I+AG SAY R+ D+A R + D+
Sbjct: 133 SGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVG 192
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A +L DMAH +GLVAAG+ PSP +ADVV+TT HK+L G R +I + KQ
Sbjct: 193 AKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRSGLI--------VGKQ--- 241
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
Y IN AVFPG QGGP H I+G AVALK TPE+ Q + LS + A L+
Sbjct: 242 ---QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLM 298
Query: 374 -----ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-MV 427
+ G +VSGGT+ HLVLV+LR+ +DG E +L V I N+N VP D MV
Sbjct: 299 APDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMV 358
Query: 428 PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459
G+R+GTPAL +RGF + +F +VA+ A+
Sbjct: 359 TSGLRIGTPALATRGFGDTEFTEVADIIATAL 390
Score = 71 (30.1 bits), Expect = 1.9e-81, Sum P(2) = 1.9e-81
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 461 LALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTV-GFEK 512
LA + GDT+ T++ D +AT ++ S ++S L+D+ A+ FP G E+
Sbjct: 369 LATRGFGDTEFTEVADIIATALATGS-SVDVSALKDRATRLARAFPLYDGLEE 420
>UNIPROTKB|Q9KMP4 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 178/382 (46%), Positives = 239/382 (62%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + +ELI SEN S +VMQA G+ +TNKY+EGYPG RYYGG E++D E + +RA
Sbjct: 39 RQNEQIELIASENIVSKAVMQAQGTCLTNKYAEGYPGRRYYGGCEHVDSVEQIAIERAKM 98
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
FQ A NVQ SG+ AN V ALL+P + IM + L GGHL+HG + +S
Sbjct: 99 LFQCQYA----NVQPHSGAQANGAVMLALLQPGDTIMGMSLDAGGHLTHGARP---ALSG 151
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+F + Y +D T I+Y+ + A +PK+I+AG SA R D+A+ R + D+
Sbjct: 152 K--WFNAVQYGVDRQTLEINYDSVRALALEHKPKMIIAGGSAIPRTIDFAQFRSIVDEVG 209
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A+++ DMAHI+GLVA G PSP +A VVTTTTHK+LRGPRG MI +EI+K
Sbjct: 210 ALLMVDMAHIAGLVATGAHPSPLPHAHVVTTTTHKTLRGPRGGMILTNS--EEIHK---- 263
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
KIN AVFPGLQGGP H I+ AVA + PE++ Y + V+ N+ A L
Sbjct: 264 -------KINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFRTYIDSVIDNAKVLAEVLQ 316
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-MVPGGIR 432
RG D+V+GGT+ HL+LV+LR KG+ G++VE+ LE I NKN +P D M+ GIR
Sbjct: 317 TRGCDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDEEKPMITSGIR 376
Query: 433 MGTPALTSRGFVEEDFEKVAEF 454
+GTPA TSRGF E+F+ + E+
Sbjct: 377 LGTPAGTSRGFGREEFKLIGEW 398
>TIGR_CMR|VC_A0278 [details] [associations]
symbol:VC_A0278 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 178/382 (46%), Positives = 239/382 (62%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + +ELI SEN S +VMQA G+ +TNKY+EGYPG RYYGG E++D E + +RA
Sbjct: 39 RQNEQIELIASENIVSKAVMQAQGTCLTNKYAEGYPGRRYYGGCEHVDSVEQIAIERAKM 98
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
FQ A NVQ SG+ AN V ALL+P + IM + L GGHL+HG + +S
Sbjct: 99 LFQCQYA----NVQPHSGAQANGAVMLALLQPGDTIMGMSLDAGGHLTHGARP---ALSG 151
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+F + Y +D T I+Y+ + A +PK+I+AG SA R D+A+ R + D+
Sbjct: 152 K--WFNAVQYGVDRQTLEINYDSVRALALEHKPKMIIAGGSAIPRTIDFAQFRSIVDEVG 209
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A+++ DMAHI+GLVA G PSP +A VVTTTTHK+LRGPRG MI +EI+K
Sbjct: 210 ALLMVDMAHIAGLVATGAHPSPLPHAHVVTTTTHKTLRGPRGGMILTNS--EEIHK---- 263
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
KIN AVFPGLQGGP H I+ AVA + PE++ Y + V+ N+ A L
Sbjct: 264 -------KINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFRTYIDSVIDNAKVLAEVLQ 316
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-MVPGGIR 432
RG D+V+GGT+ HL+LV+LR KG+ G++VE+ LE I NKN +P D M+ GIR
Sbjct: 317 TRGCDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDEEKPMITSGIR 376
Query: 433 MGTPALTSRGFVEEDFEKVAEF 454
+GTPA TSRGF E+F+ + E+
Sbjct: 377 LGTPAGTSRGFGREEFKLIGEW 398
>TIGR_CMR|APH_0154 [details] [associations]
symbol:APH_0154 "serine hydroxymethyltransferase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_504778.1 HSSP:P34897 ProteinModelPortal:Q2GLH3 SMR:Q2GLH3
STRING:Q2GLH3 GeneID:3930419 KEGG:aph:APH_0154 PATRIC:20948876
OMA:FKAYAHQ BioCyc:APHA212042:GHPM-189-MONOMER Uniprot:Q2GLH3
Length = 425
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 180/412 (43%), Positives = 249/412 (60%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ L++I SENF S +V+QA GSV+TNKY+EGYPG+RYY G +D+AE+L +R
Sbjct: 27 RQNTSLQMIASENFVSRAVLQAQGSVLTNKYAEGYPGSRYYCGCSEVDVAETLAVERLCK 86
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F K+ NVQ SGS AN QVY ALLKP + ++ + L GGHL+HG + +S
Sbjct: 87 LFG---CKYA-NVQPHSGSQANQQVYMALLKPGDTVLGMSLDSGGHLTHGAGPN---VSG 139
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+F +PY + T +D ++E+ A +P LI+AGAS+Y R D+ R + DK
Sbjct: 140 K--WFNAVPYNVRRDTNLLDMGEIEEIALRVKPNLIIAGASSYPRRIDFKAFRAIADKVG 197
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A LAD+AH SGL+A G P+PF YA VVT+TTHK+LRGPRG +I +EI+K
Sbjct: 198 AYFLADIAHYSGLIAGGQYPTPFGYAHVVTSTTHKTLRGPRGGVIMTDD--EEIHK---- 251
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
K+ AVFPG+QGG H I+ AVA ++ +P++K Y Q+L NS A L
Sbjct: 252 -------KLRSAVFPGMQGGALMHVIAAKAVAFREAMSPDFKVYVSQILDNSRALAAVLA 304
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-MVPGGIR 432
G D+V+GGT++H+V+V+LR+KG+ G V LE I NKN VP D V GIR
Sbjct: 305 TGGLDVVTGGTDSHMVVVDLRSKGLTGRDVSSSLERAGIVCNKNAVPFDTEKPWVTSGIR 364
Query: 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTK--LKDFVATLM 482
+G A TSRG V +DFEK+ + V +++ D + +++ VATL+
Sbjct: 365 LGAAAETSRGLVVKDFEKIGQLVLKIVD-SMRAGADMSVVESGVREEVATLV 415
>TIGR_CMR|ECH_0311 [details] [associations]
symbol:ECH_0311 "serine hydroxymethyltransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 HSSP:P34897
RefSeq:YP_507132.1 ProteinModelPortal:Q2GHF1 SMR:Q2GHF1
STRING:Q2GHF1 PRIDE:Q2GHF1 GeneID:3927190 KEGG:ech:ECH_0311
PATRIC:20576127 OMA:LELTHQF BioCyc:ECHA205920:GJNR-311-MONOMER
Uniprot:Q2GHF1
Length = 420
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 169/379 (44%), Positives = 235/379 (62%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ GL+LI SENF S +V+QA GS+ TNKY+EGYPG RYY G + D+ E+L +R
Sbjct: 27 RQNSGLQLIASENFVSKAVLQAQGSIFTNKYAEGYPGKRYYCGCHFADIVENLAIERLCR 86
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F K+ NVQ SGS AN V+ ALLKP + ++ + L GGHL+HG IS
Sbjct: 87 LFG---CKFA-NVQPHSGSQANQGVFAALLKPGDTVIGMSLDCGGHLTHG---SAPSISG 139
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+F + Y++D TG ID +++EK A P LI+AG+S+Y R+ D+ R R++ DK
Sbjct: 140 K--WFNAVQYQVDRDTGLIDMDEIEKLAVEHNPSLIIAGSSSYPRVIDFKRFREIADKVG 197
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
A +LAD+AH +GL+AAG PSP EYA V+T+TTHK+LRGPRGA+I ++I+K
Sbjct: 198 AYLLADIAHYAGLIAAGEFPSPVEYAHVITSTTHKTLRGPRGAVIM--TNYEDIHK---- 251
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
KI ++FPG+QGGP H I+ AVA + PE+K Y +Q++ NS
Sbjct: 252 -------KIQSSIFPGMQGGPLMHVIAAKAVAFAEALKPEFKDYAKQIIKNSKALGEVFK 304
Query: 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-MVPGGIR 432
ERG DLV+GGT++H+V+++LR+K + G LE + I NKN +P D V G+R
Sbjct: 305 ERGLDLVTGGTDSHMVVLDLRSKSVTGKDAVLALEKLGIICNKNAIPFDPEKPFVTSGLR 364
Query: 433 MGTPALTSRGFVEEDFEKV 451
G+ A TSRG E +F ++
Sbjct: 365 FGSAAETSRGLQESEFREI 383
>TIGR_CMR|DET_0436 [details] [associations]
symbol:DET_0436 "Serine hydroxymethyltransferase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_181180.1 ProteinModelPortal:Q3Z9B9 SMR:Q3Z9B9
STRING:Q3Z9B9 PRIDE:Q3Z9B9 GeneID:3230231 KEGG:det:DET0436
PATRIC:21607941 OMA:ERFRAIC BioCyc:DETH243164:GJNF-436-MONOMER
Uniprot:Q3Z9B9
Length = 415
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 175/384 (45%), Positives = 230/384 (59%)
Query: 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD 138
++LI SEN+TS +V++A GSV TNKY+EGYPG RYY G EY D E L RA F +
Sbjct: 26 IDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAIEELAIDRAKTLFHAE 85
Query: 139 PAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFF 198
A NVQ SG+ AN Y A++KP + IM L L HGGHL+HG K + +
Sbjct: 86 HA----NVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKANFTGKLY 136
Query: 199 ETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLA 258
+ Y L+ T IDY+ LEK A RP+LIV GASAY R+ D+ R R +CDK A ++
Sbjct: 137 HVIEYGLNAETERIDYDNLEKLALEHRPRLIVTGASAYPRILDFERFRAICDKVDAKLMV 196
Query: 259 DMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAY 318
D+AHI+GLVAAG+ PSP YADVVT+T+HK+LRGPRG I KE Y
Sbjct: 197 DIAHIAGLVAAGLHPSPVPYADVVTSTSHKTLRGPRGGFIL----CKE----------QY 242
Query: 319 EDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYD 378
I+QAVFP +QGGP ++ AVA ++ P + YQ+++L N+ A L + G
Sbjct: 243 AKAIDQAVFPVIQGGPLMQVVAAKAVAFQEAMQPGFVTYQKKILENTQVMAEELRKLGLR 302
Query: 379 LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVP--GDVSAMVPGGIRMGTP 436
LVSGGT+NHLVLV+L G++G + L I N+NTVP + +A VP GIR+G P
Sbjct: 303 LVSGGTDNHLVLVDLSPIGVNGYDAQLALRRAGIVINRNTVPFAENQTANVPAGIRLGCP 362
Query: 437 ALTSRGFVEEDFEKVAEFFDAAVK 460
A TSRGF + + + +K
Sbjct: 363 AATSRGFGPAEIRQTVSWIGKILK 386
>UNIPROTKB|O53615 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006544 "glycine metabolic
process" evidence=IDA] [GO:0006563 "L-serine metabolic process"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842572 GO:GO:0006544 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 BRENDA:2.1.2.1
PIR:G70848 RefSeq:NP_214584.1 RefSeq:NP_334486.1
RefSeq:YP_006513385.1 ProteinModelPortal:O53615 SMR:O53615
PRIDE:O53615 EnsemblBacteria:EBMYCT00000002193
EnsemblBacteria:EBMYCT00000071276 GeneID:13316049 GeneID:886983
GeneID:922815 KEGG:mtc:MT0076 KEGG:mtu:Rv0070c KEGG:mtv:RVBD_0070c
PATRIC:18121891 TubercuList:Rv0070c OMA:DYLIDMD Uniprot:O53615
Length = 425
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 173/392 (44%), Positives = 229/392 (58%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ GLE+I SEN+ ++VMQA GSV+TNKY+EGYPG RYYGG E++D E L R
Sbjct: 25 RQESGLEMIASENYAPLAVMQAQGSVLTNKYAEGYPGRRYYGGCEFVDGVEQLAIDRVKA 84
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F + A NVQ SG+ AN ALL P + I+ L L HGGHL+HG +I+
Sbjct: 85 LFGAEYA----NVQPHSGATANAATMHALLNPGDTILGLSLAHGGHLTHGM-----RINF 135
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+ Y + + +D + + ++A RPK+I+AG SAY R D+AR R + D+
Sbjct: 136 SGKLYHATAYEVSKEDYLVDMDAVAEAARTHRPKMIIAGWSAYPRQLDFARFRAIADEVD 195
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQE 313
AV++ DMAH +GLVAAGV PSP +A VVT+TTHK+L GPRG +I N
Sbjct: 196 AVLMVDMAHFAGLVAAGVHPSPVPHAHVVTSTTHKTLGGPRGGIIL-------CNDP--- 245
Query: 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373
A KIN AVFPG QGGP H I+ A A K PE+ Q++ L + A L
Sbjct: 246 ---AIAKKINSAVFPGQQGGPLEHVIAAKATAFKMAAQPEFAQRQQRCLDGARILAGRLT 302
Query: 374 -----ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-MV 427
ERG +++GGT+ HLVLV+LR+ +DG + E L +V I N+N VP D M+
Sbjct: 303 QPDVAERGIAVLTGGTDVHLVLVDLRDAELDGQQAEDRLAAVDITVNRNAVPFDPRPPMI 362
Query: 428 PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459
G+R+GTPAL +RGF DF VA+ AA+
Sbjct: 363 TSGLRIGTPALAARGFSHNDFRAVADLIAAAL 394
>TIGR_CMR|NSE_0218 [details] [associations]
symbol:NSE_0218 "serine hydroxymethyltransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897 RefSeq:YP_506113.1
ProteinModelPortal:Q2GEI3 SMR:Q2GEI3 STRING:Q2GEI3 PRIDE:Q2GEI3
GeneID:3932003 KEGG:nse:NSE_0218 PATRIC:22680535 OMA:INEVIQG
ProtClustDB:CLSK2528038 BioCyc:NSEN222891:GHFU-249-MONOMER
Uniprot:Q2GEI3
Length = 419
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 167/408 (40%), Positives = 232/408 (56%)
Query: 73 ARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 132
+RQ K L+LI SENF S +V++A GSV TNKY+EGYPG RYY G EY D E L +R
Sbjct: 29 SRQRKHLQLIASENFASAAVLEAQGSVFTNKYAEGYPGKRYYCGCEYADQIERLAIERVC 88
Query: 133 DAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKIS 192
F A NVQ SGS AN V+ ALL P + ++ L GGHL+HG ++
Sbjct: 89 KLFGCSYA----NVQPHSGSQANQAVFLALLNPGDTVLGFSLASGGHLTHG-----ASVN 139
Query: 193 AVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ 252
+F + Y + ID +++ A P++I+AGASAY++ D+ R++ D+
Sbjct: 140 LSGKWFNAVHYNVRRDNFEIDMDEVRDLAKKHSPRMIIAGASAYSKYIDFKSFREIADEV 199
Query: 253 KAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQ 312
A +L D+AH +GL+AAG PSPF Y DV+T+TTHK+LRGPRGA++ +
Sbjct: 200 GAYLLGDVAHYAGLIAAGEYPSPFPYVDVMTSTTHKTLRGPRGAIVL---------TNSE 250
Query: 313 EVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372
E++ KIN A+FPGLQGGP H I+ AVA + T E+K Y V+ N+ A L
Sbjct: 251 ELIR----KINSAIFPGLQGGPQMHAIAARAVAFGEALTTEFKEYIRSVIRNAKTLANVL 306
Query: 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-MVPGGI 431
ERG+D++SGGT+ H+V+++LR + G+ LES I NKN +P D V G+
Sbjct: 307 RERGFDVLSGGTDTHIVMIDLRKLNLKGNVSALKLESAGIICNKNAIPFDEEKPFVTSGL 366
Query: 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVA 479
R G+PA T+RG E +F + A L KI D + D +
Sbjct: 367 RFGSPAETTRGMRELEFAHIGGLI--ADLLEEKISTDNAAEMVLDLTS 412
>UNIPROTKB|G3V4W5 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4W5 SMR:G3V4W5 Ensembl:ENST00000556689
ArrayExpress:G3V4W5 Bgee:G3V4W5 Uniprot:G3V4W5
Length = 237
Score = 506 (183.2 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 93/135 (68%), Positives = 111/135 (82%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 64 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 123
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM LDLP GGHL+HGY +D K+I
Sbjct: 124 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRI 183
Query: 192 SAVSIFFETMPYRLD 206
SA SIFFE+MPY+L+
Sbjct: 184 SATSIFFESMPYKLN 198
Score = 157 (60.3 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 248 VCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTT 286
VCD+ KA +LADMAHISGLVAA VIPSPF++AD+VTTTT
Sbjct: 199 VCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTT 237
>UNIPROTKB|G3V5L0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V5L0 SMR:G3V5L0 Ensembl:ENST00000554975
ArrayExpress:G3V5L0 Bgee:G3V5L0 Uniprot:G3V5L0
Length = 215
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 119/173 (68%), Positives = 140/173 (80%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 43 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 102
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM LDLP GGHL+HGY +D K+I
Sbjct: 103 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRI 162
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYAR 244
SA SIFFE+MPY+L+ TG IDY QL +A LFRP+LI+AG SAYARL DYAR
Sbjct: 163 SATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYAR 215
>TIGR_CMR|SO_3471 [details] [associations]
symbol:SO_3471 "serine hydroxymethyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 OMA:AICAKFP GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239403
RefSeq:NP_719020.1 ProteinModelPortal:Q8EBN8 SMR:Q8EBN8
GeneID:1171147 KEGG:son:SO_3471 PATRIC:23526638 Uniprot:Q8EBN8
Length = 417
Score = 600 (216.3 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 135/333 (40%), Positives = 199/333 (59%)
Query: 147 QSLSGSPANFQVYTALLKPHERIMAL----DLPHGGHLSHG-YQTDTKKISAVSIFFETM 201
Q + AN Q ++ MAL D G +L+HG + T ++ + +
Sbjct: 84 QLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHGSPVNFSGRLYNII 143
Query: 202 PYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMA 261
PY +DES G IDY+++E+ A +PK+++ G SAY+ + D+AR+R++ DK A + DMA
Sbjct: 144 PYGIDES-GKIDYDEMERLAVEHKPKMMIGGFSAYSGIVDWARMREIADKIGAYLFVDMA 202
Query: 262 HISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDK 321
H++GL+AAGV P+P +A VVT+TTHK+L GPRG +I ++ E +Y K
Sbjct: 203 HVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGII--------LSAADDEELYK---K 251
Query: 322 INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381
+N AVFPG QGGP H I+G AVA K+ PE+K YQ+QV++N+ LERGY +VS
Sbjct: 252 LNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKTYQQQVVNNAKAMVEVFLERGYKIVS 311
Query: 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTS 440
GGT NHL+LV+L + + G + L S +I NKN+VP D S V G+R+GTPA+T
Sbjct: 312 GGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITR 371
Query: 441 RGFVEEDFEK----VAEFFDAAVKLAL--KIKG 467
RGF E + ++ + + D A A+ ++KG
Sbjct: 372 RGFKEAEAKQLTGWICDILDDAHNPAVIERVKG 404
Score = 558 (201.5 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 114/237 (48%), Positives = 160/237 (67%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ + +ELI SEN+TS VMQA GS +TNKY+EGYPG RYYGG EY+D+ E+L +RA
Sbjct: 25 RQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVETLAIERAKQ 84
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
F A NVQ SGS AN VY ALLKP + ++ ++L HGGHL+HG ++
Sbjct: 85 LFGATYA----NVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHLTHG-----SPVNF 135
Query: 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253
+ +PY +DES G IDY+++E+ A +PK+++ G SAY+ + D+AR+R++ DK
Sbjct: 136 SGRLYNIIPYGIDES-GKIDYDEMERLAVEHKPKMMIGGFSAYSGIVDWARMREIADKIG 194
Query: 254 AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQ 310
A + DMAH++GL+AAGV P+P +A VVT+TTHK+L GPRG +I +E+ K+
Sbjct: 195 AYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIILSAADDEELYKK 251
Score = 39 (18.8 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 8/42 (19%), Positives = 19/42 (45%)
Query: 468 DTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVG 509
+ + +L ++ ++ D + I ++ +V RFP G
Sbjct: 376 EAEAKQLTGWICDILDDAHNPAVIERVKGQVLALCARFPVYG 417
>TIGR_CMR|CBU_1419 [details] [associations]
symbol:CBU_1419 "serine hydroxymethyltransferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:NP_820403.1 ProteinModelPortal:Q83BT3 SMR:Q83BT3
PRIDE:Q83BT3 GeneID:1209325 KEGG:cbu:CBU_1419 PATRIC:17931591
OMA:SKELTGW BioCyc:CBUR227377:GJ7S-1406-MONOMER Uniprot:Q83BT3
Length = 419
Score = 592 (213.5 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 133/307 (43%), Positives = 185/307 (60%)
Query: 154 ANFQVYTALLKPHERIMALDLPHGG----HLSHG-YQTDTKKISAVSIFFETMPYRLDES 208
AN Q ++ E MAL P LSHG + T +S F++ + Y L+ +
Sbjct: 91 ANVQPHSGSQANAEAYMALMNPGDTLLAMDLSHGGHLTHGSPVSFSGKFYKAVHYGLN-A 149
Query: 209 TGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVA 268
G IDYEQ + A +PK+I+AG SA++ + D+ R R++ D A + D+AH++GLVA
Sbjct: 150 HGDIDYEQAAQLAQEHKPKVILAGFSAFSGIVDWQRFREIADSVNAYFMTDIAHVAGLVA 209
Query: 269 AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFP 328
AGV PSP + ADV TTTTHK+LRGPR +I + K E+ E ++N AVFP
Sbjct: 210 AGVYPSPVQIADVTTTTTHKTLRGPRAGLI--------LAKANPEL----EKRLNSAVFP 257
Query: 329 GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHL 388
G QGGP H I+ AVA K+ PE+K Y +Q+L N+ A + ERGY +VSGGT+NHL
Sbjct: 258 GSQGGPLMHIIAAKAVAFKEAMQPEFKTYAQQILKNAKAMAEVMKERGYTIVSGGTQNHL 317
Query: 389 VLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEED 447
LV+L +K I G E L +I NKNTVPG+ S V G+R+GTPA+T+RGF E++
Sbjct: 318 FLVSLLDKNISGKEAEAALGRANITVNKNTVPGETRSPFVTSGLRIGTPAITTRGFKEKE 377
Query: 448 FEKVAEF 454
++A +
Sbjct: 378 ASQLAHW 384
Score = 535 (193.4 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 113/239 (47%), Positives = 156/239 (65%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
+ RQ +ELI SEN+ S V++ GSV+TNKY+EGYPG RYYGG E++D+AE L RA
Sbjct: 23 RRRQEHHVELIASENYVSPRVLELQGSVLTNKYAEGYPGRRYYGGCEFVDIAEQLAIDRA 82
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
+ F D A NVQ SGS AN + Y AL+ P + ++A+DL HGGHL+HG +
Sbjct: 83 KELFGADYA----NVQPHSGSQANAEAYMALMNPGDTLLAMDLSHGGHLTHG-----SPV 133
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
S F++ + Y L+ + G IDYEQ + A +PK+I+AG SA++ + D+ R R++ D
Sbjct: 134 SFSGKFYKAVHYGLN-AHGDIDYEQAAQLAQEHKPKVILAGFSAFSGIVDWQRFREIADS 192
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQ 310
A + D+AH++GLVAAGV PSP + ADV TTTTHK+LRGPR +I K E+ K+
Sbjct: 193 VNAYFMTDIAHVAGLVAAGVYPSPVQIADVTTTTTHKTLRGPRAGLIL-AKANPELEKR 250
Score = 45 (20.9 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 462 ALKIKG--DTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFP 506
A+ +G + + ++L +V ++ D + I++++ K E +FP
Sbjct: 367 AITTRGFKEKEASQLAHWVCDILDDIHNEKVIADVKQKAHELCGKFP 413
>TIGR_CMR|CPS_3844 [details] [associations]
symbol:CPS_3844 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK13034
RefSeq:YP_270506.1 ProteinModelPortal:Q47XG4 SMR:Q47XG4
STRING:Q47XG4 GeneID:3518659 KEGG:cps:CPS_3844 PATRIC:21470595
OMA:LQSRDPV BioCyc:CPSY167879:GI48-3861-MONOMER Uniprot:Q47XG4
Length = 431
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 123/273 (45%), Positives = 171/273 (62%)
Query: 183 GYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDY 242
G+ T K + +F + Y + + IDY+Q+ A +PK+I+AG SA R D+
Sbjct: 135 GHLTHGAKPAQSGKWFNAIHYGVRKDDMRIDYDQVLALAIEHQPKMIIAGGSAIPRQIDF 194
Query: 243 ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK 302
A+ R++ D+ A+++ DMAHI+GLVAAG +P +ADVVTTTTHK+LRGPRG +I
Sbjct: 195 AKFREIADQVGAILMVDMAHIAGLVAAGAHQNPLPFADVVTTTTHKTLRGPRGGLILTNN 254
Query: 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362
++ K KIN AVFPGLQGGP H I+ AVAL +V P + AY +QVL
Sbjct: 255 --PDVAK-----------KINSAVFPGLQGGPLMHVIAAKAVALGEVLEPSFGAYIKQVL 301
Query: 363 SNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD 422
SN+ A +L +RG D+V+ GT+ HL+LV+LR KG+ G+ E+ LE I NKN +P D
Sbjct: 302 SNARVLASTLQQRGCDIVTDGTDTHLMLVDLRPKGLKGNTTEESLERAGITCNKNGIPFD 361
Query: 423 VSA-MVPGGIRMGTPALTSRGFVEEDFEKVAEF 454
MV GIR+GTPA TSRGF ++FE + ++
Sbjct: 362 SEKPMVTSGIRLGTPAGTSRGFGNDEFELIGQW 394
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 111/239 (46%), Positives = 154/239 (64%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
+ARQ + +ELI SEN S +VM+A G+V+TNKY+EGYPG RYYGG E++D+ E+L RA
Sbjct: 33 EARQNQQIELIASENIVSKAVMEAQGTVLTNKYAEGYPGRRYYGGCEHVDLVETLAIDRA 92
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
F+ D VNVQ SG+ AN V AL+KP + I+ + L GGHL+HG K
Sbjct: 93 KLIFKAD----FVNVQPHSGAQANGAVMLALVKPGDTILGMSLDAGGHLTHG-----AKP 143
Query: 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDK 251
+ +F + Y + + IDY+Q+ A +PK+I+AG SA R D+A+ R++ D+
Sbjct: 144 AQSGKWFNAIHYGVRKDDMRIDYDQVLALAIEHQPKMIIAGGSAIPRQIDFAKFREIADQ 203
Query: 252 QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG--VKEIN 308
A+++ DMAHI+GLVAAG +P +ADVVTTTTHK+LRGPRG +I K+IN
Sbjct: 204 VGAILMVDMAHIAGLVAAGAHQNPLPFADVVTTTTHKTLRGPRGGLILTNNPDVAKKIN 262
>UNIPROTKB|G3V540 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
SMR:G3V540 Ensembl:ENST00000553837 Ensembl:ENST00000554604
Uniprot:G3V540
Length = 192
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 93/135 (68%), Positives = 111/135 (82%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 43 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 102
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM LDLP GGHL+HGY +D K+I
Sbjct: 103 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRI 162
Query: 192 SAVSIFFETMPYRLD 206
SA SIFFE+MPY+L+
Sbjct: 163 SATSIFFESMPYKLN 177
>UNIPROTKB|I3LGT5 [details] [associations]
symbol:I3LGT5 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 EMBL:FP565227
Ensembl:ENSSSCT00000028049 Uniprot:I3LGT5
Length = 161
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 93/125 (74%), Positives = 108/125 (86%)
Query: 170 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229
M LDLP GGHL+HGY TD K+ISA SIFFE+MPY+L+ TG IDY+QL +A LFRP+LI
Sbjct: 1 MGLDLPDGGHLTHGYMTDVKRISATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLI 60
Query: 230 VAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 289
+AG SAYARL DYAR+R+VCD+ KA +LADMAHISGLVAA VIPSPFE+ADVVTTTTHK+
Sbjct: 61 IAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFEHADVVTTTTHKT 120
Query: 290 LRGPR 294
LRG R
Sbjct: 121 LRGAR 125
>UNIPROTKB|J3KRZ5 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008732 "L-allo-threonine aldolase activity" evidence=IEA]
[GO:0016597 "amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] InterPro:IPR001085
InterPro:IPR015421 Pfam:PF00464 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 EMBL:AC127537
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 Ensembl:ENST00000582653 Uniprot:J3KRZ5
Length = 167
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 89/125 (71%), Positives = 102/125 (81%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133
RQ GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID E+LCQKRAL
Sbjct: 43 RQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQ 102
Query: 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193
A++LDP WGVNVQ SGSPANF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA
Sbjct: 103 AYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISA 162
Query: 194 VSIFF 198
SIFF
Sbjct: 163 TSIFF 167
>UNIPROTKB|G3V2W0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2W0 SMR:G3V2W0 Ensembl:ENST00000554310
ArrayExpress:G3V2W0 Bgee:G3V2W0 Uniprot:G3V2W0
Length = 160
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 81/118 (68%), Positives = 95/118 (80%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 43 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 102
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTK 189
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM LDLP GGHL+HGY +D K
Sbjct: 103 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVK 160
>UNIPROTKB|G3V4X0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4X0 SMR:G3V4X0 Ensembl:ENST00000557427
ArrayExpress:G3V4X0 Bgee:G3V4X0 Uniprot:G3V4X0
Length = 159
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 80/116 (68%), Positives = 94/116 (81%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 43 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 102
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTD 187
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM LDLP GGHL+HGY +D
Sbjct: 103 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSD 158
>UNIPROTKB|G3V2E4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2E4 SMR:G3V2E4 Ensembl:ENST00000557433
ArrayExpress:G3V2E4 Bgee:G3V2E4 Uniprot:G3V2E4
Length = 171
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 74/107 (69%), Positives = 86/107 (80%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 64 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 123
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGG 178
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM LDLP GG
Sbjct: 124 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGG 170
>UNIPROTKB|G3V4T0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4T0 SMR:G3V4T0 Ensembl:ENST00000555773
ArrayExpress:G3V4T0 Bgee:G3V4T0 Uniprot:G3V4T0
Length = 149
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 74/107 (69%), Positives = 86/107 (80%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 43 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 102
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGG 178
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM LDLP GG
Sbjct: 103 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGG 149
>UNIPROTKB|G3V3Y8 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2 SMR:G3V3Y8
Ensembl:ENST00000553529 Ensembl:ENST00000556737 Uniprot:G3V3Y8
Length = 147
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 72/104 (69%), Positives = 84/104 (80%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 43 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 102
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLP 175
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM LDLP
Sbjct: 103 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLP 146
>UNIPROTKB|G3V241 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V241 SMR:G3V241 Ensembl:ENST00000557703
ArrayExpress:G3V241 Bgee:G3V241 Uniprot:G3V241
Length = 142
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 68/99 (68%), Positives = 80/99 (80%)
Query: 72 KARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131
K RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D E LCQ+RA
Sbjct: 43 KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 102
Query: 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIM 170
L+AF LDPA+WGVNVQ SGSPAN VYTALL+PH+RIM
Sbjct: 103 LEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIM 141
>TIGR_CMR|SPO_3529 [details] [associations]
symbol:SPO_3529 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008168 GO:GO:0006544
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239403 RefSeq:YP_168724.1 ProteinModelPortal:Q5LMN4
GeneID:3192992 KEGG:sil:SPO3529 PATRIC:23380529 OMA:ATMANLA
ProtClustDB:CLSK759294 Uniprot:Q5LMN4
Length = 431
Score = 257 (95.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 100/378 (26%), Positives = 164/378 (43%)
Query: 81 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPA 140
L P+ N + + + ++ S GYPG +Y G E I+ E + + A F A
Sbjct: 46 LNPATNVMNPRAEAVLARGLGSRPSLGYPGDKYEMGLEAIEEIEVIAAELAAKVFN---A 102
Query: 141 KWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF-FE 199
++ ++ SG+ AN + AL +P + I+A GGH++H K ++ +
Sbjct: 103 RYA-EIRVGSGALANLYGFMALTRPGDTIIAPPASIGGHVTH------HKAGCAGLYGLK 155
Query: 200 TMPYRLDESTGY-IDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLA 258
T+ +D + GY +D L + A RP+LI G S + A +R++ D+ A +L
Sbjct: 156 TIEAPVD-ADGYSLDLSALAELAERHRPRLITVGGSLNLFPHPVAAVREIADRVGAKVLF 214
Query: 259 DMAHISGLVAAGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYA 317
D AH G++A G +P E A ++T +T+KSL GP G +I + EI
Sbjct: 215 DAAHQCGIIAGGAWANPLDEGAHLMTMSTYKSLGGPAGGLIVTNEA--EI---------- 262
Query: 318 YEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY 377
++++ FPG+ + LA++L AY + ++ + A L G
Sbjct: 263 -AERLDAIAFPGMTANFDAAKSAALAISLLDW-VDHGAAYAQAMVDLAQALAAELEALGL 320
Query: 378 DL---VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG 434
+ G T +H V G G K L A +P A G+R+G
Sbjct: 321 PVFHGAGGATASHQFAVEAARFG-GGQAASKTLRRAGFLACGIGLPIAPVAGDMNGLRIG 379
Query: 435 TPALTSRGFVEEDFEKVA 452
TP L RG E ++A
Sbjct: 380 TPELVRRGVTPEHAAELA 397
>UNIPROTKB|G3V2D2 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] InterPro:IPR001085 InterPro:IPR015421
Pfam:PF00464 GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2D2 SMR:G3V2D2 Ensembl:ENST00000557269
ArrayExpress:G3V2D2 Bgee:G3V2D2 Uniprot:G3V2D2
Length = 52
Score = 149 (57.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 170 MALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD 206
M LDLP GGHL+HGY +D K+ISA SIFFE+MPY+L+
Sbjct: 1 MGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 37
>UNIPROTKB|J3KRK5 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0008242 "omega peptidase
activity" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] InterPro:IPR001085 InterPro:IPR006155
InterPro:IPR015421 Pfam:PF00464 PROSITE:PS50957 GO:GO:0030170
Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008242
GO:GO:0006544 EMBL:AC127537 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HGNC:HGNC:10850 ChiTaRS:SHMT1 EMBL:AL353997
ProteinModelPortal:J3KRK5 Ensembl:ENST00000580002 Uniprot:J3KRK5
Length = 128
Score = 131 (51.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 74 RQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR 112
RQ GLELI SENF S +V++A+GS + NKYSEGYPG R
Sbjct: 43 RQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQR 81
>TIGR_CMR|ECH_0333 [details] [associations]
symbol:ECH_0333 "serine hydroxymethyltransferase domain
protein" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] InterPro:IPR001085 InterPro:IPR015422 Pfam:PF00464
GO:GO:0030170 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0008168 GO:GO:0006544 eggNOG:COG0112 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 RefSeq:YP_507153.1
ProteinModelPortal:Q2GHD0 STRING:Q2GHD0 GeneID:3927872
KEGG:ech:ECH_0333 PATRIC:20576167
BioCyc:ECHA205920:GJNR-333-MONOMER Uniprot:Q2GHD0
Length = 68
Score = 94 (38.1 bits), Expect = 0.00091, P = 0.00091
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 337 HTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTE 385
H I AVA + PE+K Y +Q++ NS ER D V+GGT+
Sbjct: 2 HVIVAKAVAFAEALKPEFKDYAKQIIKNSKALGEVFKERELDFVTGGTK 50
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 519 503 0.00085 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 85
No. of states in DFA: 603 (64 KB)
Total size of DFA: 266 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.70u 0.18s 42.88t Elapsed: 00:00:03
Total cpu time: 42.72u 0.18s 42.90t Elapsed: 00:00:03
Start: Mon May 20 17:05:38 2013 End: Mon May 20 17:05:41 2013