Query 010058
Match_columns 519
No_of_seqs 462 out of 3170
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 20:33:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010058.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010058hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2467 Glycine/serine hydroxy 100.0 3E-108 6E-113 773.7 40.8 464 48-511 12-476 (477)
2 COG0112 GlyA Glycine/serine hy 100.0 3.4E-96 7E-101 705.5 41.7 407 55-508 5-412 (413)
3 PLN02271 serine hydroxymethylt 100.0 4.7E-89 1E-93 696.6 44.7 456 51-511 123-585 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 2.4E-82 5.1E-87 634.7 32.8 399 57-455 1-399 (399)
5 PLN03226 serine hydroxymethylt 100.0 1.1E-75 2.4E-80 610.7 45.9 473 44-519 2-475 (475)
6 PRK13580 serine hydroxymethylt 100.0 2.9E-72 6.3E-77 573.2 41.4 430 55-515 28-493 (493)
7 PTZ00094 serine hydroxymethylt 100.0 9E-61 2E-65 501.1 45.5 441 54-510 12-452 (452)
8 PRK13034 serine hydroxymethylt 100.0 2.7E-52 5.8E-57 431.9 44.0 411 52-507 4-415 (416)
9 PRK00011 glyA serine hydroxyme 100.0 1.2E-47 2.5E-52 399.9 42.8 412 53-509 2-414 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 5.5E-45 1.2E-49 378.3 40.7 383 59-461 2-385 (402)
11 COG0520 csdA Selenocysteine ly 100.0 8.8E-36 1.9E-40 304.3 29.7 363 78-460 23-404 (405)
12 COG1104 NifS Cysteine sulfinat 100.0 2.1E-33 4.5E-38 276.3 28.2 346 83-464 8-380 (386)
13 COG0436 Aspartate/tyrosine/aro 100.0 1.3E-30 2.8E-35 266.7 33.3 342 76-460 28-390 (393)
14 PRK10874 cysteine sulfinate de 100.0 2.1E-30 4.6E-35 268.8 30.8 359 78-461 20-398 (401)
15 TIGR03392 FeS_syn_CsdA cystein 100.0 4.5E-30 9.8E-35 266.1 31.5 358 78-460 17-394 (398)
16 PRK09295 bifunctional cysteine 100.0 3.9E-30 8.4E-35 267.2 29.7 358 78-460 24-403 (406)
17 cd06451 AGAT_like Alanine-glyo 100.0 1.5E-29 3.3E-34 258.3 32.5 344 79-459 1-355 (356)
18 PLN02855 Bifunctional selenocy 100.0 1.2E-29 2.6E-34 265.0 31.4 363 78-462 33-419 (424)
19 TIGR03402 FeS_nifS cysteine de 100.0 1.6E-29 3.4E-34 260.4 31.5 343 83-461 6-372 (379)
20 PF00266 Aminotran_5: Aminotra 100.0 1.2E-29 2.6E-34 260.4 30.4 344 82-451 5-371 (371)
21 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.9E-29 4.2E-34 259.5 30.5 351 87-457 11-375 (376)
22 TIGR01979 sufS cysteine desulf 100.0 8.1E-29 1.8E-33 257.2 31.7 359 78-460 19-400 (403)
23 cd06453 SufS_like Cysteine des 100.0 1E-28 2.2E-33 253.9 30.4 352 82-455 5-373 (373)
24 TIGR01976 am_tr_V_VC1184 cyste 100.0 8.4E-29 1.8E-33 256.6 29.8 339 79-455 19-397 (397)
25 PLN02409 serine--glyoxylate am 100.0 3.5E-28 7.6E-33 251.5 32.9 349 79-462 11-373 (401)
26 TIGR03403 nifS_epsilon cystein 100.0 3.4E-28 7.3E-33 250.7 31.6 342 83-462 6-376 (382)
27 PRK02948 cysteine desulfurase; 100.0 2.3E-28 5E-33 251.9 28.9 342 83-460 7-373 (381)
28 PLN02651 cysteine desulfurase 100.0 1.3E-28 2.9E-33 251.9 26.9 330 83-449 6-364 (364)
29 COG1168 MalY Bifunctional PLP- 100.0 1.3E-27 2.7E-32 230.8 28.4 320 77-436 26-367 (388)
30 COG0075 Serine-pyruvate aminot 100.0 2.7E-27 5.8E-32 235.1 31.6 349 78-462 6-364 (383)
31 PRK13238 tnaA tryptophanase/L- 100.0 3E-27 6.5E-32 246.6 32.1 346 74-465 34-437 (460)
32 TIGR02006 IscS cysteine desulf 100.0 1.6E-27 3.6E-32 247.0 28.9 345 79-462 5-378 (402)
33 TIGR02326 transamin_PhnW 2-ami 100.0 9.3E-27 2E-31 238.3 32.2 343 78-459 4-360 (363)
34 TIGR01814 kynureninase kynuren 100.0 1.3E-26 2.9E-31 240.5 29.8 353 77-459 27-405 (406)
35 PRK06108 aspartate aminotransf 100.0 6.9E-26 1.5E-30 233.6 34.1 337 76-460 24-381 (382)
36 TIGR01822 2am3keto_CoA 2-amino 100.0 3.1E-26 6.7E-31 237.1 31.6 334 76-460 38-388 (393)
37 PLN00175 aminotransferase fami 100.0 1.4E-25 2.9E-30 233.0 34.9 358 54-460 33-412 (413)
38 PRK13479 2-aminoethylphosphona 100.0 7.8E-26 1.7E-30 232.0 32.3 345 79-461 7-363 (368)
39 PRK14012 cysteine desulfurase; 100.0 4.3E-26 9.2E-31 236.7 29.6 347 79-462 5-380 (404)
40 COG0399 WecE Predicted pyridox 100.0 6.9E-26 1.5E-30 225.5 28.2 330 84-460 9-372 (374)
41 KOG1549 Cysteine desulfurase N 100.0 2.5E-26 5.4E-31 226.9 24.6 349 77-462 43-419 (428)
42 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 1.5E-25 3.3E-30 228.5 31.5 340 81-459 3-355 (355)
43 TIGR03235 DNA_S_dndA cysteine 100.0 2E-26 4.3E-31 235.0 24.6 302 83-416 5-320 (353)
44 PRK08361 aspartate aminotransf 100.0 2.2E-25 4.7E-30 230.4 32.5 339 76-460 33-389 (391)
45 PRK08960 hypothetical protein; 99.9 4.4E-25 9.5E-30 227.8 34.0 338 76-459 32-385 (387)
46 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.7E-25 3.7E-30 230.6 30.1 333 78-461 20-381 (387)
47 PRK07682 hypothetical protein; 99.9 4.3E-25 9.3E-30 227.3 33.0 336 76-460 20-375 (378)
48 PRK13520 L-tyrosine decarboxyl 99.9 5.2E-25 1.1E-29 226.1 31.5 344 62-460 5-370 (371)
49 PRK05957 aspartate aminotransf 99.9 1.1E-24 2.5E-29 224.8 34.2 359 54-460 5-384 (389)
50 PRK07681 aspartate aminotransf 99.9 1.6E-24 3.5E-29 224.5 34.9 332 76-457 32-384 (399)
51 TIGR03540 DapC_direct LL-diami 99.9 2E-24 4.4E-29 222.7 35.0 334 75-456 28-381 (383)
52 PRK06225 aspartate aminotransf 99.9 1.4E-24 3E-29 223.7 33.4 335 76-461 28-376 (380)
53 cd06454 KBL_like KBL_like; thi 99.9 4.3E-25 9.3E-30 224.7 29.3 319 89-458 17-348 (349)
54 PRK07366 succinyldiaminopimela 99.9 1.2E-24 2.7E-29 224.6 33.1 336 75-458 29-387 (388)
55 cd00617 Tnase_like Tryptophana 99.9 1.4E-24 3.1E-29 223.4 33.1 346 76-466 11-413 (431)
56 KOG0257 Kynurenine aminotransf 99.9 3.4E-25 7.5E-30 216.0 26.7 306 54-394 9-344 (420)
57 PRK07337 aminotransferase; Val 99.9 1.4E-24 3E-29 224.3 32.9 338 76-459 30-387 (388)
58 PRK07179 hypothetical protein; 99.9 7.3E-25 1.6E-29 227.7 30.7 325 83-461 60-398 (407)
59 PRK12414 putative aminotransfe 99.9 1.5E-24 3.2E-29 223.6 32.5 352 57-457 11-383 (384)
60 PRK09082 methionine aminotrans 99.9 1E-24 2.3E-29 224.9 31.3 355 56-457 11-385 (386)
61 PRK06348 aspartate aminotransf 99.9 3.6E-24 7.9E-29 220.7 35.2 359 52-457 5-381 (384)
62 PRK08912 hypothetical protein; 99.9 3E-24 6.6E-29 221.6 34.6 360 53-460 4-385 (387)
63 PLN02724 Molybdenum cofactor s 99.9 8.3E-25 1.8E-29 243.5 32.5 369 77-462 34-489 (805)
64 PRK06939 2-amino-3-ketobutyrat 99.9 8.8E-25 1.9E-29 226.5 30.5 335 77-461 43-393 (397)
65 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 5E-25 1.1E-29 225.8 27.7 331 77-460 7-367 (370)
66 PRK06207 aspartate aminotransf 99.9 2.8E-24 6E-29 222.8 33.0 341 75-461 38-402 (405)
67 PLN02483 serine palmitoyltrans 99.9 3.1E-25 6.7E-30 233.9 26.2 371 38-461 52-466 (489)
68 TIGR00858 bioF 8-amino-7-oxono 99.9 1.5E-24 3.3E-29 221.6 29.9 329 76-456 16-360 (360)
69 cd00613 GDC-P Glycine cleavage 99.9 1.2E-24 2.7E-29 225.5 29.5 314 118-455 60-398 (398)
70 PRK09276 LL-diaminopimelate am 99.9 5.4E-24 1.2E-28 219.6 34.0 333 76-456 31-383 (385)
71 PRK06290 aspartate aminotransf 99.9 6.8E-24 1.5E-28 219.8 34.6 336 77-461 45-405 (410)
72 PRK07683 aminotransferase A; V 99.9 8.4E-24 1.8E-28 218.2 34.5 355 56-460 8-382 (387)
73 PRK13355 bifunctional HTH-doma 99.9 4E-24 8.7E-29 228.2 33.1 362 53-460 119-513 (517)
74 PRK05942 aspartate aminotransf 99.9 7.8E-24 1.7E-28 219.0 34.0 332 76-459 35-387 (394)
75 PRK07777 aminotransferase; Val 99.9 7E-24 1.5E-28 218.9 33.4 356 57-459 6-384 (387)
76 PRK07309 aromatic amino acid a 99.9 1.2E-23 2.5E-28 217.4 34.7 340 76-461 30-388 (391)
77 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.6E-24 5.7E-29 220.0 29.2 326 79-459 4-360 (361)
78 PRK08068 transaminase; Reviewe 99.9 1.2E-23 2.6E-28 217.3 34.1 332 76-456 32-384 (389)
79 PRK07550 hypothetical protein; 99.9 1.1E-23 2.4E-28 217.4 33.0 337 75-458 28-384 (386)
80 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.4E-23 3E-28 215.7 33.4 316 88-457 32-372 (373)
81 PRK05958 8-amino-7-oxononanoat 99.9 4.7E-24 1E-28 220.1 30.0 333 76-459 39-385 (385)
82 COG0156 BioF 7-keto-8-aminopel 99.9 7.1E-24 1.5E-28 212.8 28.9 328 78-458 41-387 (388)
83 KOG2862 Alanine-glyoxylate ami 99.9 9.6E-24 2.1E-28 197.1 27.5 347 80-461 20-382 (385)
84 PLN00145 tyrosine/nicotianamin 99.9 1.6E-23 3.4E-28 218.5 32.5 350 75-462 51-425 (430)
85 TIGR03537 DapC succinyldiamino 99.9 1.2E-23 2.7E-28 214.1 31.0 327 79-457 3-349 (350)
86 TIGR01437 selA_rel uncharacter 99.9 5.8E-24 1.3E-28 216.8 28.5 311 84-459 21-363 (363)
87 PRK08636 aspartate aminotransf 99.9 4.3E-23 9.4E-28 214.0 35.2 341 76-461 33-400 (403)
88 PTZ00377 alanine aminotransfer 99.9 2E-23 4.4E-28 221.0 33.2 329 89-461 90-475 (481)
89 PRK08363 alanine aminotransfer 99.9 3.8E-23 8.2E-28 214.3 34.3 339 76-460 30-393 (398)
90 PRK05764 aspartate aminotransf 99.9 7.3E-23 1.6E-27 211.9 35.2 337 76-461 31-391 (393)
91 COG0079 HisC Histidinol-phosph 99.9 2.2E-23 4.7E-28 209.9 30.1 318 77-460 23-353 (356)
92 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.8E-23 4E-28 215.7 30.4 334 76-460 33-380 (385)
93 cd00616 AHBA_syn 3-amino-5-hyd 99.9 3.8E-24 8.2E-29 218.1 24.8 299 118-456 18-352 (352)
94 PRK11658 UDP-4-amino-4-deoxy-L 99.9 9.8E-24 2.1E-28 216.6 27.8 335 86-459 10-377 (379)
95 PLN02656 tyrosine transaminase 99.9 2.5E-23 5.5E-28 216.0 31.2 350 74-461 29-403 (409)
96 PLN03026 histidinol-phosphate 99.9 2.8E-23 6E-28 213.5 31.1 318 76-458 52-379 (380)
97 PLN02187 rooty/superroot1 99.9 4.3E-23 9.4E-28 216.7 32.3 346 76-462 66-439 (462)
98 PRK09147 succinyldiaminopimela 99.9 5.9E-23 1.3E-27 212.6 32.9 329 76-459 29-394 (396)
99 PRK14807 histidinol-phosphate 99.9 5.6E-23 1.2E-27 209.3 31.3 318 77-459 23-350 (351)
100 PRK04870 histidinol-phosphate 99.9 2.4E-23 5.1E-28 212.6 28.3 321 76-459 26-356 (356)
101 PRK02769 histidine decarboxyla 99.9 1.1E-22 2.5E-27 207.1 33.1 324 89-461 35-372 (380)
102 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.7E-23 3.7E-28 215.4 27.3 323 88-459 8-380 (380)
103 PRK05387 histidinol-phosphate 99.9 2.9E-23 6.4E-28 211.7 28.6 318 76-460 24-352 (353)
104 PRK04366 glycine dehydrogenase 99.9 9.3E-23 2E-27 215.0 33.2 342 84-462 78-449 (481)
105 PRK01533 histidinol-phosphate 99.9 2E-23 4.3E-28 213.3 27.2 311 76-461 29-355 (366)
106 PRK09148 aminotransferase; Val 99.9 2E-22 4.4E-27 209.0 35.1 338 76-461 30-390 (405)
107 cd06502 TA_like Low-specificit 99.9 3E-23 6.6E-28 210.2 28.3 318 83-457 3-337 (338)
108 PRK06107 aspartate aminotransf 99.9 1.2E-22 2.7E-27 210.6 33.3 336 76-460 33-399 (402)
109 PTZ00433 tyrosine aminotransfe 99.9 7.8E-23 1.7E-27 212.7 31.5 345 74-461 31-408 (412)
110 TIGR01141 hisC histidinol-phos 99.9 3.4E-23 7.5E-28 210.6 27.5 313 77-455 20-345 (346)
111 TIGR03538 DapC_gpp succinyldia 99.9 1.8E-22 3.8E-27 208.9 32.9 329 76-458 28-392 (393)
112 PLN02721 threonine aldolase 99.9 5.4E-23 1.2E-27 209.7 28.7 325 79-460 8-351 (353)
113 PRK02731 histidinol-phosphate 99.9 5.6E-23 1.2E-27 210.7 28.8 319 76-460 32-365 (367)
114 PLN02822 serine palmitoyltrans 99.9 5.7E-23 1.2E-27 216.3 29.4 337 77-461 110-477 (481)
115 PLN00143 tyrosine/nicotianamin 99.9 1.3E-22 2.7E-27 210.7 31.1 348 74-461 30-404 (409)
116 PRK03158 histidinol-phosphate 99.9 6.7E-23 1.4E-27 209.5 28.0 314 77-458 30-358 (359)
117 PRK03317 histidinol-phosphate 99.9 9.9E-23 2.1E-27 208.9 29.1 324 78-460 28-363 (368)
118 PRK07324 transaminase; Validat 99.9 5.9E-23 1.3E-27 210.7 27.4 328 77-461 27-370 (373)
119 PRK08153 histidinol-phosphate 99.9 1.9E-22 4.1E-27 206.7 30.8 321 78-462 34-366 (369)
120 PRK03080 phosphoserine aminotr 99.9 3.1E-23 6.6E-28 212.9 24.8 338 79-462 14-374 (378)
121 PRK13392 5-aminolevulinate syn 99.9 9.8E-23 2.1E-27 211.9 28.6 322 88-461 61-397 (410)
122 PRK09265 aminotransferase AlaT 99.9 5.9E-22 1.3E-26 205.7 34.3 339 76-461 33-401 (404)
123 PRK09105 putative aminotransfe 99.9 2.1E-22 4.5E-27 206.2 30.5 312 76-459 43-368 (370)
124 TIGR01265 tyr_nico_aTase tyros 99.9 6.5E-22 1.4E-26 205.2 34.3 355 64-460 19-400 (403)
125 PRK08175 aminotransferase; Val 99.9 8.1E-22 1.8E-26 204.0 34.9 336 76-460 29-388 (395)
126 PRK06855 aminotransferase; Val 99.9 3.5E-22 7.5E-27 208.8 32.2 349 76-461 32-429 (433)
127 PLN03227 serine palmitoyltrans 99.9 2.6E-22 5.6E-27 206.7 30.7 328 89-462 14-383 (392)
128 TIGR01788 Glu-decarb-GAD gluta 99.9 5.2E-22 1.1E-26 205.0 32.9 343 86-461 51-429 (431)
129 PLN02450 1-aminocyclopropane-1 99.9 2E-22 4.4E-27 211.9 30.1 344 77-461 39-430 (468)
130 PRK05355 3-phosphoserine/phosp 99.9 3E-23 6.4E-28 210.9 22.9 341 78-461 4-358 (360)
131 PLN02376 1-aminocyclopropane-1 99.9 1.8E-22 3.9E-27 213.1 29.2 344 77-462 47-439 (496)
132 PRK09064 5-aminolevulinate syn 99.9 3.6E-22 7.7E-27 207.6 31.0 331 78-461 48-397 (407)
133 PRK00950 histidinol-phosphate 99.9 1.7E-22 3.7E-27 206.7 27.8 314 77-459 35-360 (361)
134 TIGR01821 5aminolev_synth 5-am 99.9 3.6E-22 7.7E-27 207.2 30.1 328 82-461 50-396 (402)
135 PRK08056 threonine-phosphate d 99.9 3E-22 6.5E-27 204.3 29.1 318 77-460 21-354 (356)
136 cd06450 DOPA_deC_like DOPA dec 99.9 4.1E-23 8.8E-28 209.9 22.5 283 114-457 30-344 (345)
137 PRK07590 L,L-diaminopimelate a 99.9 6.7E-22 1.5E-26 205.5 31.9 348 63-458 19-408 (409)
138 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.9E-22 4.1E-27 203.8 26.7 304 89-459 35-345 (346)
139 cd00611 PSAT_like Phosphoserin 99.9 1E-22 2.3E-27 207.3 24.6 335 79-458 1-353 (355)
140 PRK00451 glycine dehydrogenase 99.9 7.1E-22 1.5E-26 207.8 31.4 309 122-459 112-446 (447)
141 TIGR01264 tyr_amTase_E tyrosin 99.9 2E-21 4.4E-26 201.5 33.8 341 76-460 31-398 (401)
142 PLN02231 alanine transaminase 99.9 1.1E-21 2.4E-26 208.3 32.1 360 58-460 112-526 (534)
143 PRK10534 L-threonine aldolase; 99.9 3.8E-22 8.2E-27 201.9 27.2 320 79-460 2-332 (333)
144 PRK15481 transcriptional regul 99.9 5.2E-22 1.1E-26 207.8 28.7 327 78-460 87-430 (431)
145 PRK05166 histidinol-phosphate 99.9 1.3E-21 2.8E-26 200.8 31.0 318 77-459 37-369 (371)
146 PF01041 DegT_DnrJ_EryC1: DegT 99.9 1.1E-22 2.4E-27 207.8 22.3 316 89-456 4-363 (363)
147 PRK07568 aspartate aminotransf 99.9 4.5E-21 9.7E-26 198.8 34.3 332 77-461 31-392 (397)
148 PRK01688 histidinol-phosphate 99.9 2.6E-22 5.7E-27 204.3 24.0 310 78-455 30-350 (351)
149 PRK07865 N-succinyldiaminopime 99.9 2.1E-21 4.5E-26 198.9 30.6 338 54-456 4-363 (364)
150 PRK13393 5-aminolevulinate syn 99.9 2.5E-21 5.4E-26 201.0 31.2 328 82-461 50-396 (406)
151 PRK03321 putative aminotransfe 99.9 8.6E-22 1.9E-26 200.8 27.1 314 77-460 23-350 (352)
152 PLN03032 serine decarboxylase; 99.9 4.3E-21 9.3E-26 194.1 31.7 316 88-457 35-372 (374)
153 PRK05937 8-amino-7-oxononanoat 99.9 1.3E-21 2.9E-26 200.5 28.1 312 89-462 20-351 (370)
154 PLN02955 8-amino-7-oxononanoat 99.9 2.4E-21 5.2E-26 198.9 29.6 325 81-461 106-461 (476)
155 TIGR03539 DapC_actino succinyl 99.9 2.6E-21 5.5E-26 197.6 29.3 326 65-455 10-356 (357)
156 PRK07908 hypothetical protein; 99.9 3.1E-21 6.7E-26 196.4 29.8 316 74-460 20-346 (349)
157 PF00155 Aminotran_1_2: Aminot 99.9 8.3E-22 1.8E-26 201.7 25.7 331 78-455 3-363 (363)
158 PRK14809 histidinol-phosphate 99.9 3.4E-21 7.4E-26 196.7 29.9 316 76-460 30-356 (357)
159 PRK02610 histidinol-phosphate 99.9 4.4E-21 9.6E-26 197.0 30.0 321 78-460 30-370 (374)
160 PRK09275 aspartate aminotransf 99.9 1.2E-21 2.7E-26 205.3 26.2 349 77-463 101-519 (527)
161 TIGR01364 serC_1 phosphoserine 99.9 1.2E-21 2.6E-26 198.2 25.1 329 88-460 3-347 (349)
162 PRK06836 aspartate aminotransf 99.9 1.1E-20 2.4E-25 195.5 32.4 337 77-462 34-392 (394)
163 COG1167 ARO8 Transcriptional r 99.9 5.6E-21 1.2E-25 200.0 30.2 331 90-462 107-456 (459)
164 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2.9E-21 6.3E-26 197.5 27.4 333 87-459 8-375 (376)
165 TIGR01366 serC_3 phosphoserine 99.9 1.4E-21 3E-26 199.1 24.8 339 79-460 5-359 (361)
166 cd00609 AAT_like Aspartate ami 99.9 8.7E-21 1.9E-25 192.6 30.0 303 114-456 32-349 (350)
167 PLN02414 glycine dehydrogenase 99.9 4.2E-21 9.1E-26 212.6 29.1 314 118-466 564-912 (993)
168 PRK04781 histidinol-phosphate 99.9 6.2E-21 1.3E-25 195.1 28.2 286 128-459 65-361 (364)
169 PRK06358 threonine-phosphate d 99.9 1E-20 2.2E-25 192.8 29.3 314 78-459 21-353 (354)
170 PLN02607 1-aminocyclopropane-1 99.9 8.8E-21 1.9E-25 198.1 29.3 346 78-462 49-438 (447)
171 PLN02672 methionine S-methyltr 99.9 1.3E-20 2.8E-25 209.1 31.5 335 76-460 697-1079(1082)
172 TIGR03542 DAPAT_plant LL-diami 99.9 2.1E-20 4.5E-25 193.9 30.7 341 76-458 33-401 (402)
173 PRK04635 histidinol-phosphate 99.9 5.5E-21 1.2E-25 194.9 25.5 310 77-457 32-351 (354)
174 PRK13237 tyrosine phenol-lyase 99.9 3.6E-20 7.7E-25 188.3 30.3 315 114-466 74-438 (460)
175 PRK05839 hypothetical protein; 99.9 3.5E-20 7.6E-25 190.3 30.7 320 77-460 25-373 (374)
176 PRK07392 threonine-phosphate d 99.9 2.8E-20 6.1E-25 190.1 29.8 316 77-460 23-358 (360)
177 TIGR03801 asp_4_decarbox aspar 99.9 8.5E-21 1.8E-25 198.8 26.3 349 78-462 96-517 (521)
178 PRK15407 lipopolysaccharide bi 99.9 3.8E-20 8.2E-25 192.5 29.9 359 63-460 10-435 (438)
179 KOG0259 Tyrosine aminotransfer 99.9 1.2E-19 2.6E-24 174.3 29.5 345 77-461 62-433 (447)
180 PRK09440 avtA valine--pyruvate 99.9 9.1E-20 2E-24 190.1 31.5 344 76-461 30-411 (416)
181 cd00615 Orn_deC_like Ornithine 99.9 1.3E-21 2.9E-26 194.1 16.5 223 125-373 62-293 (294)
182 TIGR02618 tyr_phenol_ly tyrosi 99.9 5E-20 1.1E-24 186.7 27.6 316 113-466 66-431 (450)
183 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 5.5E-21 1.2E-25 193.2 18.4 268 125-417 69-400 (417)
184 PRK09257 aromatic amino acid a 99.9 1.1E-19 2.3E-24 188.3 27.7 330 76-458 26-395 (396)
185 PTZ00376 aspartate aminotransf 99.9 1.2E-19 2.7E-24 188.2 27.7 334 76-460 29-402 (404)
186 COG2008 GLY1 Threonine aldolas 99.9 1E-19 2.3E-24 175.9 25.0 322 83-459 5-341 (342)
187 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.2E-19 2.7E-24 186.2 26.8 319 88-459 9-374 (375)
188 PRK06425 histidinol-phosphate 99.9 2E-19 4.3E-24 181.8 27.1 300 77-459 17-331 (332)
189 PLN02368 alanine transaminase 99.9 1.8E-19 3.8E-24 185.9 27.2 252 113-394 102-396 (407)
190 PRK14808 histidinol-phosphate 99.9 3.6E-19 7.7E-24 180.0 28.2 303 76-457 19-333 (335)
191 PRK03967 histidinol-phosphate 99.9 3.7E-19 7.9E-24 180.1 28.3 307 77-461 19-334 (337)
192 KOG1360 5-aminolevulinate synt 99.9 1.1E-19 2.4E-24 174.9 22.9 333 78-461 172-524 (570)
193 PRK05968 hypothetical protein; 99.8 1.3E-19 2.8E-24 186.3 23.3 288 118-460 63-385 (389)
194 PLN02397 aspartate transaminas 99.8 3.2E-19 6.9E-24 185.8 26.5 303 113-460 86-420 (423)
195 TIGR01140 L_thr_O3P_dcar L-thr 99.8 4.4E-19 9.4E-24 179.1 26.0 300 77-455 18-329 (330)
196 PRK04311 selenocysteine syntha 99.8 1.2E-18 2.5E-23 181.1 29.0 322 83-460 93-463 (464)
197 KOG1359 Glycine C-acetyltransf 99.8 1.9E-19 4E-24 167.1 20.3 326 79-461 70-412 (417)
198 PRK06767 methionine gamma-lyas 99.8 2.4E-19 5.2E-24 184.4 22.7 289 118-460 61-384 (386)
199 PRK15029 arginine decarboxylas 99.8 5E-19 1.1E-23 191.3 25.4 299 125-460 208-603 (755)
200 PLN02880 tyrosine decarboxylas 99.8 2.4E-18 5.3E-23 181.0 28.6 320 118-462 118-485 (490)
201 TIGR01328 met_gam_lyase methio 99.8 6.9E-19 1.5E-23 181.0 23.8 216 118-378 59-281 (391)
202 PRK05367 glycine dehydrogenase 99.8 1.3E-18 2.9E-23 193.8 27.8 310 118-466 538-880 (954)
203 PRK07504 O-succinylhomoserine 99.8 5.7E-19 1.2E-23 182.0 23.2 219 118-382 65-291 (398)
204 PRK06234 methionine gamma-lyas 99.8 1.1E-18 2.4E-23 180.2 24.9 290 118-461 64-397 (400)
205 PLN02452 phosphoserine transam 99.8 1.4E-18 3E-23 175.9 24.9 343 78-460 8-362 (365)
206 PRK05664 threonine-phosphate d 99.8 2.7E-18 5.8E-23 173.3 26.9 262 129-460 56-327 (330)
207 PLN02242 methionine gamma-lyas 99.8 1.4E-18 3E-23 179.8 24.6 225 116-383 74-305 (418)
208 TIGR00461 gcvP glycine dehydro 99.8 4.9E-18 1.1E-22 186.1 29.3 316 118-466 526-872 (939)
209 TIGR01329 cysta_beta_ly_E cyst 99.8 1.8E-18 3.9E-23 177.2 24.5 290 117-461 46-375 (378)
210 PRK06959 putative threonine-ph 99.8 2.3E-18 5E-23 174.3 25.0 298 77-462 25-334 (339)
211 PRK07811 cystathionine gamma-s 99.8 1.9E-18 4.2E-23 177.6 24.7 214 118-378 61-282 (388)
212 PRK00854 rocD ornithine--oxo-a 99.8 6.9E-18 1.5E-22 175.1 28.9 314 89-460 59-400 (401)
213 TIGR03531 selenium_SpcS O-phos 99.8 5.6E-18 1.2E-22 174.3 27.7 310 119-458 102-443 (444)
214 COG3844 Kynureninase [Amino ac 99.8 5.5E-18 1.2E-22 159.9 25.1 351 76-461 30-402 (407)
215 PRK12566 glycine dehydrogenase 99.8 2.4E-18 5.3E-23 187.2 25.8 303 125-467 546-882 (954)
216 TIGR00474 selA seryl-tRNA(sec) 99.8 7.3E-18 1.6E-22 174.8 27.9 317 83-455 88-453 (454)
217 PRK07505 hypothetical protein; 99.8 1.9E-17 4.1E-22 171.8 31.0 331 77-461 47-399 (402)
218 PRK08133 O-succinylhomoserine 99.8 2.4E-18 5.2E-23 177.0 23.1 241 87-378 34-281 (390)
219 PRK07503 methionine gamma-lyas 99.8 3.9E-18 8.5E-23 176.1 24.7 213 118-375 65-283 (403)
220 PRK08574 cystathionine gamma-s 99.8 3.8E-18 8.1E-23 175.0 24.4 213 117-375 52-269 (385)
221 PRK08064 cystathionine beta-ly 99.8 3.9E-18 8.4E-23 175.5 24.2 287 118-457 54-382 (390)
222 cd00614 CGS_like CGS_like: Cys 99.8 2.8E-18 6E-23 175.7 22.9 215 116-376 38-258 (369)
223 PRK08354 putative aminotransfe 99.8 2E-17 4.4E-22 165.6 28.5 291 77-458 9-309 (311)
224 PRK08861 cystathionine gamma-s 99.8 8.8E-18 1.9E-22 171.8 24.8 211 118-375 53-270 (388)
225 PRK08637 hypothetical protein; 99.8 2E-17 4.3E-22 170.8 27.5 308 114-460 40-385 (388)
226 PLN02590 probable tyrosine dec 99.8 2.6E-17 5.7E-22 173.3 28.6 318 117-461 165-532 (539)
227 TIGR01324 cysta_beta_ly_B cyst 99.8 7E-18 1.5E-22 172.3 23.6 289 116-460 48-375 (377)
228 TIGR03799 NOD_PanD_pyr putativ 99.8 4.6E-17 1E-21 171.7 30.1 316 118-453 125-517 (522)
229 PRK08776 cystathionine gamma-s 99.8 9.5E-18 2.1E-22 173.0 23.9 211 118-375 60-277 (405)
230 KOG1368 Threonine aldolase [Am 99.8 6.2E-18 1.3E-22 157.5 20.2 313 88-459 34-366 (384)
231 PRK07810 O-succinylhomoserine 99.8 7.5E-18 1.6E-22 173.7 23.1 216 118-378 70-291 (403)
232 TIGR01325 O_suc_HS_sulf O-succ 99.8 7E-18 1.5E-22 173.2 22.8 211 118-375 54-270 (380)
233 PRK13578 ornithine decarboxyla 99.8 7.8E-18 1.7E-22 180.3 23.6 302 125-460 177-564 (720)
234 PRK08247 cystathionine gamma-s 99.8 2.3E-17 5E-22 168.6 25.1 283 118-460 52-363 (366)
235 PRK08249 cystathionine gamma-s 99.8 1.6E-17 3.5E-22 171.0 23.8 212 117-375 63-280 (398)
236 PLN02263 serine decarboxylase 99.8 1.7E-16 3.8E-21 163.0 31.1 296 119-460 130-442 (470)
237 PRK04073 rocD ornithine--oxo-a 99.8 7.5E-17 1.6E-21 166.9 28.7 310 88-459 57-395 (396)
238 cd00610 OAT_like Acetyl ornith 99.8 5.7E-17 1.2E-21 169.0 27.8 337 77-459 37-413 (413)
239 PRK08045 cystathionine gamma-s 99.8 2.5E-17 5.4E-22 168.9 24.4 212 118-375 52-269 (386)
240 TIGR01365 serC_2 phosphoserine 99.8 2.3E-17 4.9E-22 167.1 23.6 308 120-460 37-372 (374)
241 PRK07050 cystathionine beta-ly 99.8 2.6E-17 5.6E-22 169.4 24.5 290 116-461 63-391 (394)
242 PRK05613 O-acetylhomoserine am 99.8 2.3E-17 5.1E-22 171.0 23.6 160 118-302 69-233 (437)
243 PRK15400 lysine decarboxylase 99.8 2E-17 4.3E-22 177.0 23.3 294 125-460 198-558 (714)
244 PRK06460 hypothetical protein; 99.8 4.8E-17 1E-21 166.6 25.4 211 118-375 45-261 (376)
245 PRK03244 argD acetylornithine 99.8 1.3E-16 2.7E-21 165.5 28.8 316 89-461 61-394 (398)
246 TIGR00707 argD acetylornithine 99.8 1.4E-16 3.1E-21 164.1 29.0 325 77-459 28-379 (379)
247 PLN02509 cystathionine beta-ly 99.8 3.8E-17 8.3E-22 169.9 24.6 219 116-382 131-358 (464)
248 COG1103 Archaea-specific pyrid 99.8 1E-16 2.2E-21 147.5 24.3 324 77-461 16-380 (382)
249 PRK07269 cystathionine gamma-s 99.8 5.3E-17 1.1E-21 165.2 25.1 217 118-383 54-278 (364)
250 TIGR02080 O_succ_thio_ly O-suc 99.8 4.1E-17 8.8E-22 167.2 24.2 210 118-375 51-268 (382)
251 PRK15399 lysine decarboxylase 99.8 5.4E-17 1.2E-21 173.7 25.8 293 125-460 198-558 (713)
252 PRK01278 argD acetylornithine 99.8 1.9E-16 4.1E-21 163.7 28.2 313 88-460 48-387 (389)
253 PRK05939 hypothetical protein; 99.8 4.9E-17 1.1E-21 167.2 23.4 157 116-300 45-206 (397)
254 COG0076 GadB Glutamate decarbo 99.8 2.3E-16 5E-21 163.5 25.9 298 83-416 69-402 (460)
255 PRK08114 cystathionine beta-ly 99.8 8.4E-17 1.8E-21 164.0 22.0 214 116-375 60-280 (395)
256 PLN02414 glycine dehydrogenase 99.8 2.3E-16 5E-21 175.2 27.1 323 88-457 117-465 (993)
257 PRK08134 O-acetylhomoserine am 99.8 1.9E-16 4.1E-21 164.3 24.3 156 117-299 63-224 (433)
258 PRK06176 cystathionine gamma-s 99.8 2E-16 4.4E-21 162.0 24.2 210 118-375 50-266 (380)
259 TIGR01885 Orn_aminotrans ornit 99.8 9.6E-16 2.1E-20 159.0 29.6 318 88-459 54-400 (401)
260 PRK09028 cystathionine beta-ly 99.8 3.5E-16 7.5E-21 159.9 25.7 211 118-375 61-277 (394)
261 PRK07812 O-acetylhomoserine am 99.7 1.9E-16 4.2E-21 164.1 23.9 153 117-295 68-223 (436)
262 PRK06702 O-acetylhomoserine am 99.7 2.9E-16 6.2E-21 161.9 24.6 159 116-300 59-223 (432)
263 PRK07582 cystathionine gamma-l 99.7 3.2E-16 6.8E-21 160.1 24.5 282 118-455 51-363 (366)
264 PRK08248 O-acetylhomoserine am 99.7 1.8E-16 3.9E-21 164.5 23.0 159 117-302 63-227 (431)
265 PRK05994 O-acetylhomoserine am 99.7 4.8E-16 1E-20 161.6 26.1 226 118-377 63-315 (427)
266 TIGR03246 arg_catab_astC succi 99.7 6.3E-16 1.4E-20 159.9 26.5 309 88-461 52-395 (397)
267 TIGR02617 tnaA_trp_ase tryptop 99.7 1.3E-15 2.9E-20 153.1 27.5 346 79-466 44-446 (467)
268 PRK07671 cystathionine beta-ly 99.7 4.1E-16 8.8E-21 159.7 24.2 211 118-375 50-266 (377)
269 COG1982 LdcC Arginine/lysine/o 99.7 1.9E-16 4.1E-21 163.0 21.6 297 125-456 73-403 (557)
270 KOG0256 1-aminocyclopropane-1- 99.7 2.1E-15 4.6E-20 146.6 27.3 308 116-460 119-460 (471)
271 PTZ00125 ornithine aminotransf 99.7 3.5E-15 7.5E-20 154.9 30.4 318 88-462 48-396 (400)
272 PRK06084 O-acetylhomoserine am 99.7 3.1E-16 6.7E-21 162.7 22.3 158 118-302 58-221 (425)
273 KOG1357 Serine palmitoyltransf 99.7 7.7E-17 1.7E-21 158.2 16.6 370 38-460 88-501 (519)
274 PRK12462 phosphoserine aminotr 99.7 2.4E-15 5.1E-20 150.8 26.6 344 76-460 3-361 (364)
275 COG4992 ArgD Ornithine/acetylo 99.7 4.8E-15 1E-19 146.5 28.2 325 76-462 42-399 (404)
276 PRK06434 cystathionine gamma-l 99.7 6.3E-16 1.4E-20 157.6 22.5 211 116-375 62-278 (384)
277 PRK05967 cystathionine beta-ly 99.7 1.5E-15 3.3E-20 155.0 25.0 220 116-382 62-289 (395)
278 PRK02627 acetylornithine amino 99.7 3.8E-15 8.1E-20 154.4 28.3 312 89-461 57-394 (396)
279 PRK02936 argD acetylornithine 99.7 6.4E-15 1.4E-19 151.6 29.5 322 78-459 31-377 (377)
280 COG1003 GcvP Glycine cleavage 99.7 3.2E-15 6.9E-20 146.6 25.4 320 118-466 105-452 (496)
281 PRK05093 argD bifunctional N-s 99.7 5.2E-15 1.1E-19 153.5 28.9 315 88-460 57-399 (403)
282 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 2.1E-15 4.5E-20 156.7 25.1 158 118-302 57-219 (418)
283 PRK07049 methionine gamma-lyas 99.7 3.1E-15 6.6E-20 155.4 26.4 215 119-378 84-315 (427)
284 PRK12381 bifunctional succinyl 99.7 6.1E-15 1.3E-19 153.0 27.7 318 88-462 56-400 (406)
285 PRK05367 glycine dehydrogenase 99.7 9.1E-16 2E-20 171.3 22.2 296 119-456 118-437 (954)
286 KOG0633 Histidinol phosphate a 99.7 2.6E-15 5.6E-20 137.6 20.4 316 74-458 39-374 (375)
287 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 6.2E-15 1.3E-19 150.0 22.2 215 116-375 53-274 (386)
288 cd01494 AAT_I Aspartate aminot 99.7 1.2E-15 2.5E-20 138.1 14.6 162 127-301 5-170 (170)
289 PF01212 Beta_elim_lyase: Beta 99.7 1.4E-16 3E-21 156.1 8.0 251 84-382 4-277 (290)
290 TIGR00713 hemL glutamate-1-sem 99.7 7.5E-14 1.6E-18 145.9 28.8 331 76-460 48-421 (423)
291 COG0626 MetC Cystathionine bet 99.7 3.9E-14 8.4E-19 142.5 25.3 223 116-382 61-291 (396)
292 PF00282 Pyridoxal_deC: Pyrido 99.6 3.3E-14 7.2E-19 144.9 24.5 255 115-382 72-362 (373)
293 COG3977 Alanine-alpha-ketoisov 99.6 5.2E-13 1.1E-17 124.9 28.2 340 77-461 31-411 (417)
294 PRK04260 acetylornithine amino 99.6 2.1E-13 4.6E-18 140.2 28.7 312 89-458 46-374 (375)
295 PLN02624 ornithine-delta-amino 99.6 3.1E-13 6.6E-18 142.5 29.8 308 89-461 93-444 (474)
296 PRK03715 argD acetylornithine 99.6 4.6E-13 1E-17 138.0 28.0 311 89-461 54-393 (395)
297 KOG0634 Aromatic amino acid am 99.6 4.5E-13 9.8E-18 131.6 26.0 308 114-461 96-466 (472)
298 PF06838 Met_gamma_lyase: Meth 99.6 8.9E-14 1.9E-18 134.6 19.4 277 89-408 26-328 (403)
299 PLN02760 4-aminobutyrate:pyruv 99.6 2.4E-12 5.1E-17 136.1 29.5 331 77-461 90-491 (504)
300 PRK05964 adenosylmethionine--8 99.6 2.2E-12 4.7E-17 134.6 28.2 327 88-460 59-421 (423)
301 COG1448 TyrB Aspartate/tyrosin 99.6 1.4E-12 3E-17 127.1 24.6 339 63-458 12-395 (396)
302 PLN00144 acetylornithine trans 99.6 2.5E-12 5.4E-17 132.2 28.2 315 88-461 32-380 (382)
303 PRK04612 argD acetylornithine 99.6 1.3E-12 2.9E-17 135.1 26.2 318 88-461 57-403 (408)
304 COG2873 MET17 O-acetylhomoseri 99.6 8.4E-13 1.8E-17 127.6 22.5 165 107-300 53-223 (426)
305 PRK08117 4-aminobutyrate amino 99.6 3.4E-12 7.5E-17 133.6 28.8 328 88-461 60-429 (433)
306 COG0160 GabT 4-aminobutyrate a 99.5 7.7E-12 1.7E-16 127.5 29.6 340 77-461 57-445 (447)
307 PRK12403 putative aminotransfe 99.5 7.1E-12 1.5E-16 131.6 29.7 329 88-462 71-453 (460)
308 PRK08360 4-aminobutyrate amino 99.5 1E-11 2.2E-16 129.8 30.8 330 88-462 58-427 (443)
309 COG1921 SelA Selenocysteine sy 99.5 4.9E-13 1.1E-17 132.2 19.3 230 84-353 35-273 (395)
310 PRK08088 4-aminobutyrate amino 99.5 9.8E-12 2.1E-16 129.8 29.9 329 88-461 58-423 (425)
311 PRK09792 4-aminobutyrate trans 99.5 9E-12 2E-16 129.7 27.6 329 88-460 57-420 (421)
312 PRK13360 omega amino acid--pyr 99.5 1.8E-11 4E-16 127.8 29.8 330 87-461 62-440 (442)
313 PRK11522 putrescine--2-oxoglut 99.5 1.7E-11 3.6E-16 128.4 29.0 322 88-462 99-452 (459)
314 PRK00062 glutamate-1-semialdeh 99.5 6.8E-12 1.5E-16 130.9 25.9 330 77-461 51-424 (426)
315 TIGR03372 putres_am_tran putre 99.5 1.2E-11 2.6E-16 128.7 26.5 319 88-459 92-442 (442)
316 PRK06058 4-aminobutyrate amino 99.5 1.4E-11 2.9E-16 129.2 26.6 327 88-460 73-441 (443)
317 PRK09221 beta alanine--pyruvat 99.5 3.6E-11 7.9E-16 125.7 29.5 213 214-461 204-443 (445)
318 PRK07495 4-aminobutyrate amino 99.5 4.5E-11 9.8E-16 124.4 30.0 330 88-461 57-421 (425)
319 PRK07986 adenosylmethionine--8 99.5 2.8E-11 6.1E-16 125.7 28.3 326 88-460 60-422 (428)
320 PRK06541 hypothetical protein; 99.5 2.2E-11 4.7E-16 127.8 27.1 218 214-461 207-455 (460)
321 TIGR00461 gcvP glycine dehydro 99.5 5.8E-12 1.3E-16 138.8 22.9 291 119-456 106-426 (939)
322 COG0001 HemL Glutamate-1-semia 99.5 8.5E-11 1.8E-15 117.8 29.1 317 89-462 71-429 (432)
323 PRK04013 argD acetylornithine/ 99.5 3.6E-11 7.8E-16 122.2 26.9 302 88-461 41-360 (364)
324 PRK06777 4-aminobutyrate amino 99.5 1.2E-10 2.6E-15 121.2 30.7 328 88-460 57-420 (421)
325 PRK09264 diaminobutyrate--2-ox 99.5 7.1E-11 1.5E-15 123.2 28.9 280 149-462 110-417 (425)
326 KOG0053 Cystathionine beta-lya 99.4 2.9E-12 6.2E-17 127.4 16.8 213 117-375 76-294 (409)
327 PRK08593 4-aminobutyrate amino 99.4 1.6E-10 3.5E-15 121.0 30.7 328 88-462 59-430 (445)
328 TIGR03811 tyr_de_CO2_Ent tyros 99.4 5.1E-11 1.1E-15 127.2 26.7 239 117-376 118-476 (608)
329 PRK06173 adenosylmethionine--8 99.4 1.2E-10 2.6E-15 121.2 28.7 328 88-461 61-425 (429)
330 PRK06105 aminotransferase; Pro 99.4 1.2E-10 2.6E-15 122.4 28.8 330 88-462 65-450 (460)
331 TIGR00508 bioA adenosylmethion 99.4 1.2E-10 2.7E-15 121.3 28.7 327 87-460 61-425 (427)
332 PRK06062 hypothetical protein; 99.4 1.2E-10 2.7E-15 122.0 28.7 327 88-462 70-446 (451)
333 TIGR02407 ectoine_ectB diamino 99.4 1.5E-10 3.3E-15 120.2 29.0 327 88-460 52-411 (412)
334 KOG0258 Alanine aminotransfera 99.4 1.1E-10 2.4E-15 113.3 25.6 314 88-437 87-454 (475)
335 TIGR00700 GABAtrnsam 4-aminobu 99.4 1.2E-10 2.6E-15 121.4 28.2 328 88-460 50-419 (420)
336 KOG1383 Glutamate decarboxylas 99.4 2.6E-11 5.6E-16 120.5 21.7 306 119-464 117-449 (491)
337 PF12897 Aminotran_MocR: Alani 99.4 1.2E-10 2.5E-15 114.0 25.7 342 77-462 23-416 (425)
338 PRK05769 4-aminobutyrate amino 99.4 1.6E-10 3.5E-15 120.9 28.6 325 88-461 71-439 (441)
339 PRK05630 adenosylmethionine--8 99.4 1.2E-10 2.6E-15 121.0 27.3 211 215-461 191-420 (422)
340 PRK00615 glutamate-1-semialdeh 99.4 2.9E-10 6.3E-15 118.3 28.9 319 88-461 70-428 (433)
341 COG3033 TnaA Tryptophanase [Am 99.4 8.1E-11 1.8E-15 113.1 22.4 342 84-466 56-449 (471)
342 PRK05965 hypothetical protein; 99.4 3.8E-10 8.1E-15 118.6 29.4 215 215-462 202-448 (459)
343 KOG1402 Ornithine aminotransfe 99.4 3.5E-10 7.6E-15 107.6 25.8 306 87-460 75-426 (427)
344 PRK07678 aminotransferase; Val 99.4 5.9E-10 1.3E-14 117.0 29.9 217 216-461 201-449 (451)
345 PF02347 GDC-P: Glycine cleava 99.4 5.6E-11 1.2E-15 120.7 21.3 298 118-455 106-429 (429)
346 COG0161 BioA Adenosylmethionin 99.4 8.6E-11 1.9E-15 119.2 22.0 210 213-462 199-444 (449)
347 PRK06918 4-aminobutyrate amino 99.4 7.7E-10 1.7E-14 116.3 30.2 330 88-462 71-444 (451)
348 COG0403 GcvP Glycine cleavage 99.4 4.5E-10 9.7E-15 111.0 26.2 293 127-458 125-447 (450)
349 PRK07046 aminotransferase; Val 99.4 6.2E-10 1.3E-14 116.6 29.1 325 77-461 76-450 (453)
350 PRK07480 putative aminotransfe 99.4 5.6E-10 1.2E-14 117.1 28.8 212 215-462 206-449 (456)
351 PRK06916 adenosylmethionine--8 99.4 3.7E-10 8.1E-15 118.7 27.3 328 87-461 72-455 (460)
352 PRK06943 adenosylmethionine--8 99.4 9.8E-10 2.1E-14 115.2 30.2 329 87-461 70-446 (453)
353 PRK06082 4-aminobutyrate amino 99.4 8.8E-10 1.9E-14 115.8 29.3 328 88-462 88-452 (459)
354 PRK07482 hypothetical protein; 99.3 6.1E-10 1.3E-14 117.1 27.6 216 213-461 205-454 (461)
355 PRK06149 hypothetical protein; 99.3 6.2E-10 1.4E-14 127.0 29.3 327 88-461 600-970 (972)
356 PRK05639 4-aminobutyrate amino 99.3 2.4E-09 5.3E-14 112.3 31.3 331 88-462 70-444 (457)
357 COG4100 Cystathionine beta-lya 99.3 1.5E-10 3.3E-15 108.6 19.1 256 90-381 38-313 (416)
358 KOG2040 Glycine dehydrogenase 99.3 9.5E-11 2.1E-15 119.9 19.0 310 120-465 580-922 (1001)
359 KOG1358 Serine palmitoyltransf 99.3 1.7E-10 3.7E-15 112.1 19.7 330 83-460 100-464 (467)
360 TIGR00709 dat 2,4-diaminobutyr 99.3 1.6E-09 3.4E-14 113.6 28.5 204 225-461 206-435 (442)
361 PRK06917 hypothetical protein; 99.3 2.1E-09 4.5E-14 112.6 29.3 335 88-462 48-438 (447)
362 PF03841 SelA: L-seryl-tRNA se 99.3 3.4E-12 7.3E-17 125.4 7.7 246 84-375 14-296 (367)
363 PRK07481 hypothetical protein; 99.3 2.9E-09 6.2E-14 111.7 29.7 200 225-461 213-445 (449)
364 PLN02482 glutamate-1-semialdeh 99.3 5.5E-09 1.2E-13 109.7 31.8 324 78-460 101-472 (474)
365 PRK07036 hypothetical protein; 99.3 1.9E-09 4.2E-14 113.4 28.0 213 215-462 207-453 (466)
366 PRK08742 adenosylmethionine--8 99.3 3.8E-09 8.3E-14 111.1 30.0 214 214-462 223-468 (472)
367 PRK07030 adenosylmethionine--8 99.3 2.7E-09 5.8E-14 112.2 28.1 214 214-462 201-447 (466)
368 PRK12389 glutamate-1-semialdeh 99.3 4.6E-09 9.9E-14 109.7 29.3 326 77-460 54-426 (428)
369 KOG3846 L-kynurenine hydrolase 99.3 3.4E-10 7.4E-15 106.5 18.3 348 85-462 76-462 (465)
370 PRK07483 hypothetical protein; 99.3 8.7E-09 1.9E-13 107.8 30.8 220 215-462 186-438 (443)
371 PRK06938 diaminobutyrate--2-ox 99.2 5.3E-09 1.2E-13 109.9 27.9 332 88-461 80-460 (464)
372 PRK06209 glutamate-1-semialdeh 99.2 3E-09 6.6E-14 111.1 25.7 311 88-462 65-406 (431)
373 TIGR00699 GABAtrns_euk 4-amino 99.2 3.1E-09 6.6E-14 111.0 25.1 209 213-459 237-464 (464)
374 PRK06148 hypothetical protein; 99.2 7.6E-09 1.6E-13 118.4 28.5 326 89-461 640-1010(1013)
375 COG1932 SerC Phosphoserine ami 99.2 2.1E-09 4.5E-14 104.7 19.9 341 78-460 6-362 (365)
376 PRK06931 diaminobutyrate--2-ox 99.2 2.9E-08 6.4E-13 104.3 29.8 204 225-462 225-455 (459)
377 TIGR03251 LAT_fam L-lysine 6-t 99.2 2.2E-08 4.7E-13 104.7 27.7 209 214-457 205-430 (431)
378 PF05889 SLA_LP_auto_ag: Solub 99.1 1.5E-09 3.2E-14 107.8 15.1 296 129-460 63-389 (389)
379 PRK08297 L-lysine aminotransfe 99.1 8.4E-08 1.8E-12 100.5 27.8 212 214-461 212-441 (443)
380 PRK12566 glycine dehydrogenase 99.1 1.5E-08 3.3E-13 111.5 22.1 285 126-456 128-439 (954)
381 PLN02974 adenosylmethionine-8- 99.1 6.8E-08 1.5E-12 106.9 27.2 214 215-459 567-816 (817)
382 KOG0629 Glutamate decarboxylas 99.0 5.1E-09 1.1E-13 103.0 14.6 249 120-382 139-421 (510)
383 KOG1404 Alanine-glyoxylate ami 99.0 9.2E-08 2E-12 93.5 20.6 181 242-455 235-432 (442)
384 KOG0628 Aromatic-L-amino-acid/ 98.8 4.8E-06 1E-10 83.4 27.5 323 115-462 106-472 (511)
385 KOG1411 Aspartate aminotransfe 98.8 3.8E-07 8.2E-12 87.8 16.7 330 77-460 53-424 (427)
386 KOG1401 Acetylornithine aminot 98.7 4.5E-06 9.8E-11 82.5 23.4 252 88-375 73-352 (433)
387 PF00202 Aminotran_3: Aminotra 98.6 1.6E-06 3.4E-11 87.9 16.9 255 88-375 33-316 (339)
388 KOG1412 Aspartate aminotransfe 98.5 4.6E-06 1E-10 79.3 15.6 272 145-462 102-406 (410)
389 KOG1403 Predicted alanine-glyo 98.4 4.9E-05 1.1E-09 72.1 20.5 339 77-463 51-439 (452)
390 PF04864 Alliinase_C: Allinase 98.1 7.1E-05 1.5E-09 73.0 14.8 183 248-458 157-362 (363)
391 KOG1405 4-aminobutyrate aminot 98.1 9.6E-05 2.1E-09 71.7 14.4 207 214-460 255-482 (484)
392 KOG2040 Glycine dehydrogenase 97.9 0.00038 8.2E-09 72.6 16.1 283 128-456 169-478 (1001)
393 PLN02994 1-aminocyclopropane-1 97.6 0.00015 3.2E-09 64.2 7.2 61 115-177 89-152 (153)
394 KOG2790 Phosphoserine aminotra 97.6 0.0016 3.5E-08 61.7 14.1 340 77-460 7-367 (370)
395 KOG3843 Predicted serine hydro 97.1 0.015 3.2E-07 54.7 14.1 164 146-335 81-260 (432)
396 PRK09375 quinolinate synthetas 80.3 9.4 0.0002 38.0 8.6 111 61-236 18-130 (319)
397 KOG0630 Predicted pyridoxal-de 74.6 27 0.0006 36.4 10.1 156 210-381 272-440 (838)
398 PF04131 NanE: Putative N-acet 72.5 11 0.00023 34.4 6.1 71 211-287 51-121 (192)
399 PRK12595 bifunctional 3-deoxy- 71.8 39 0.00084 34.4 10.7 57 209-265 232-299 (360)
400 COG3010 NanE Putative N-acetyl 70.0 11 0.00025 34.6 5.6 69 213-287 87-156 (229)
401 cd06919 Asp_decarbox Aspartate 65.5 15 0.00033 30.1 5.0 22 146-173 67-88 (111)
402 TIGR00223 panD L-aspartate-alp 63.6 18 0.00038 30.4 5.1 13 223-235 100-112 (126)
403 PRK05449 aspartate alpha-decar 62.7 19 0.0004 30.4 5.1 13 223-235 100-112 (126)
404 COG0379 NadA Quinolinate synth 59.9 57 0.0012 32.2 8.7 110 61-235 20-131 (324)
405 COG2870 RfaE ADP-heptose synth 57.0 39 0.00084 34.6 7.1 70 191-260 107-178 (467)
406 COG0853 PanD Aspartate 1-decar 56.8 28 0.00062 29.0 5.2 14 222-235 98-111 (126)
407 COG1504 Uncharacterized conser 56.1 31 0.00068 28.3 5.2 48 210-258 47-94 (121)
408 PRK14622 hypothetical protein; 54.2 43 0.00093 27.4 5.9 43 445-511 60-102 (103)
409 PRK13396 3-deoxy-7-phosphohept 49.8 1.3E+02 0.0029 30.5 9.8 57 211-267 218-285 (352)
410 COG4566 TtrR Response regulato 49.5 37 0.0008 31.0 5.2 53 363-415 15-78 (202)
411 PF02310 B12-binding: B12 bind 46.7 45 0.00097 27.5 5.2 52 212-263 38-91 (121)
412 cd02067 B12-binding B12 bindin 46.6 55 0.0012 27.1 5.7 42 211-252 36-77 (119)
413 PF14639 YqgF: Holliday-juncti 45.5 27 0.00058 30.7 3.7 43 211-253 49-91 (150)
414 PRK13397 3-deoxy-7-phosphohept 44.0 1.2E+02 0.0026 29.1 8.1 56 211-266 132-197 (250)
415 COG2515 Acd 1-aminocyclopropan 43.4 1.8E+02 0.0039 28.7 9.1 44 126-173 170-214 (323)
416 COG0373 HemA Glutamyl-tRNA red 42.3 2.3E+02 0.005 29.5 10.3 120 122-273 160-281 (414)
417 COG1087 GalE UDP-glucose 4-epi 41.4 1.4E+02 0.0031 29.5 8.1 71 146-232 3-74 (329)
418 cd02072 Glm_B12_BD B12 binding 38.3 87 0.0019 26.7 5.5 44 211-254 36-79 (128)
419 PRK02261 methylaspartate mutas 37.9 1.1E+02 0.0025 26.3 6.4 42 211-252 40-81 (137)
420 TIGR02026 BchE magnesium-proto 37.9 72 0.0016 34.1 6.3 54 210-264 48-103 (497)
421 TIGR03586 PseI pseudaminic aci 36.4 1.9E+02 0.004 29.1 8.5 53 212-266 144-205 (327)
422 PF02261 Asp_decarbox: Asparta 35.9 16 0.00034 30.3 0.6 13 223-235 100-112 (116)
423 PRK14625 hypothetical protein; 35.2 1.2E+02 0.0026 25.0 5.7 44 445-512 61-106 (109)
424 cd05126 Mth938 Mth938 domain. 34.9 1.1E+02 0.0025 25.5 5.7 48 211-259 45-92 (117)
425 PLN02672 methionine S-methyltr 34.3 4E+02 0.0086 31.6 11.7 50 215-264 517-568 (1082)
426 TIGR01501 MthylAspMutase methy 33.7 1.1E+02 0.0023 26.4 5.5 43 211-253 38-80 (134)
427 TIGR01361 DAHP_synth_Bsub phos 33.2 2.2E+02 0.0047 27.6 8.2 54 212-265 143-206 (260)
428 PF02571 CbiJ: Precorrin-6x re 32.2 98 0.0021 29.7 5.6 92 145-257 2-97 (249)
429 PF03652 UPF0081: Uncharacteri 31.6 1.4E+02 0.003 25.7 5.9 53 209-261 35-96 (135)
430 COG1091 RfbD dTDP-4-dehydrorha 31.1 4.2E+02 0.0092 26.0 9.7 48 211-258 36-97 (281)
431 KOG4759 Ribosome recycling fac 30.9 4.9E+02 0.011 25.1 11.5 50 401-463 156-205 (263)
432 smart00642 Aamy Alpha-amylase 30.6 40 0.00086 30.1 2.4 27 235-261 65-91 (166)
433 cd02071 MM_CoA_mut_B12_BD meth 29.7 1.4E+02 0.0029 25.0 5.5 48 211-258 36-86 (122)
434 TIGR00550 nadA quinolinate syn 29.7 4.7E+02 0.01 26.1 10.0 50 158-236 66-115 (310)
435 PF13378 MR_MLE_C: Enolase C-t 29.4 1.1E+02 0.0025 24.7 4.9 50 211-260 4-53 (111)
436 PF04914 DltD_C: DltD C-termin 29.0 62 0.0013 27.7 3.2 50 212-262 36-97 (130)
437 COG0718 Uncharacterized protei 28.1 1.7E+02 0.0036 24.0 5.4 41 445-510 64-104 (105)
438 smart00481 POLIIIAc DNA polyme 28.0 2.3E+02 0.0051 20.4 6.1 46 210-257 13-58 (67)
439 COG1105 FruK Fructose-1-phosph 27.6 1.8E+02 0.0039 28.9 6.6 57 205-261 104-167 (310)
440 KOG1371 UDP-glucose 4-epimeras 27.6 95 0.0021 31.0 4.6 105 145-259 4-125 (343)
441 COG0296 GlgB 1,4-alpha-glucan 27.5 52 0.0011 36.0 3.0 29 233-261 206-235 (628)
442 KOG4175 Tryptophan synthase al 27.4 72 0.0016 29.3 3.4 90 386-511 125-215 (268)
443 PRK08057 cobalt-precorrin-6x r 27.3 4E+02 0.0088 25.5 8.8 90 145-257 4-96 (248)
444 PF00128 Alpha-amylase: Alpha 26.7 44 0.00095 32.5 2.3 29 233-261 45-73 (316)
445 PRK00945 acetyl-CoA decarbonyl 26.6 2.9E+02 0.0062 24.9 7.1 65 210-274 20-84 (171)
446 PRK13602 putative ribosomal pr 25.9 1.3E+02 0.0028 23.3 4.3 43 214-258 16-58 (82)
447 TIGR02370 pyl_corrinoid methyl 25.3 2.1E+02 0.0045 26.3 6.3 51 211-261 121-175 (197)
448 TIGR00715 precor6x_red precorr 25.1 4.1E+02 0.0089 25.6 8.5 93 146-257 3-96 (256)
449 TIGR00640 acid_CoA_mut_C methy 24.8 1.9E+02 0.0041 24.7 5.5 43 211-253 39-81 (132)
450 cd02070 corrinoid_protein_B12- 24.8 2E+02 0.0044 26.4 6.2 50 211-260 119-172 (201)
451 PRK09441 cytoplasmic alpha-amy 24.7 50 0.0011 35.1 2.4 32 233-264 74-107 (479)
452 PRK14624 hypothetical protein; 23.9 1.9E+02 0.0041 24.2 5.1 42 445-510 65-106 (115)
453 TIGR00629 uvde UV damage endon 23.4 87 0.0019 31.2 3.5 33 231-263 190-222 (312)
454 cd02065 B12-binding_like B12 b 23.4 1.8E+02 0.004 23.8 5.2 52 212-263 37-90 (125)
455 COG2248 Predicted hydrolase (m 23.4 5.6E+02 0.012 24.8 8.5 50 209-259 186-245 (304)
456 cd00984 DnaB_C DnaB helicase C 23.3 2.2E+02 0.0047 26.7 6.3 48 211-258 105-168 (242)
457 COG2204 AtoC Response regulato 23.1 1.8E+02 0.0038 30.8 5.9 133 364-503 16-162 (464)
458 PF01248 Ribosomal_L7Ae: Ribos 23.1 2E+02 0.0043 22.6 5.1 44 214-259 20-64 (95)
459 PF00289 CPSase_L_chain: Carba 23.1 3E+02 0.0065 22.6 6.2 45 210-257 59-103 (110)
460 PF02445 NadA: Quinolinate syn 23.1 2.3E+02 0.0049 28.0 6.2 61 145-237 48-110 (296)
461 cd01422 MGS Methylglyoxal synt 21.8 3.4E+02 0.0074 22.4 6.4 46 215-260 60-108 (115)
462 TIGR03275 methan_mark_8 putati 21.5 26 0.00057 33.1 -0.5 83 205-292 142-225 (259)
463 COG0233 Frr Ribosome recycling 21.4 5.2E+02 0.011 23.6 7.7 46 400-458 77-122 (187)
464 PRK13601 putative L7Ae-like ri 20.9 1.8E+02 0.004 22.6 4.2 45 214-260 13-57 (82)
465 TIGR00496 frr ribosome recycli 20.9 4.5E+02 0.0099 23.7 7.4 47 400-459 66-112 (176)
466 cd05560 Xcc1710_like Xcc1710_l 20.8 2.9E+02 0.0062 22.7 5.6 47 211-259 39-85 (109)
467 PLN02673 quinolinate synthetas 20.5 7.6E+02 0.016 27.5 10.0 100 59-179 253-357 (724)
468 PF02603 Hpr_kinase_N: HPr Ser 20.4 1.2E+02 0.0027 25.6 3.5 37 217-258 74-110 (127)
469 COG1377 FlhB Flagellar biosynt 20.3 77 0.0017 32.1 2.5 37 225-261 262-317 (363)
470 cd02069 methionine_synthase_B1 20.3 2.8E+02 0.006 25.9 6.1 50 211-260 125-176 (213)
No 1
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-108 Score=773.71 Aligned_cols=464 Identities=72% Similarity=1.140 Sum_probs=449.0
Q ss_pred chhhhhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHH
Q 010058 48 PWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 127 (519)
Q Consensus 48 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~ 127 (519)
.+..+++.+|.+.|||++++|+.|+.||+.+|+||||||+++.+|+||++++|+|+|+|||||.|||+|++++|++|.+|
T Consensus 12 ~~~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LC 91 (477)
T KOG2467|consen 12 AVIKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLC 91 (477)
T ss_pred hhhhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC
Q 010058 128 QKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE 207 (519)
Q Consensus 128 ~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~ 207 (519)
++++.+.||+|++.||||||+.||+.||++++.++++|+|+|+.+|+++|||++|||++..+++++..+.|+..||.+|+
T Consensus 92 q~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~ 171 (477)
T KOG2467|consen 92 QKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP 171 (477)
T ss_pred HHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC
Q 010058 208 STGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 287 (519)
Q Consensus 208 ~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~ 287 (519)
.++.||||.|++.+..++||+||++.|.|++.+|++++++||++.|+++++|+||++|+++.++.|+||++|||||+++|
T Consensus 172 ~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTH 251 (477)
T KOG2467|consen 172 STGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTH 251 (477)
T ss_pred CCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcceEEeeccccccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 010058 288 KSLRGPRGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSS 366 (519)
Q Consensus 288 K~l~GprgG~i~~~~~~~~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~ 366 (519)
|+|+|||||+|++++..+... ..|..+.|++.++||.++||++||+||+|.|+|+++||+++..++|++|++|+.+|++
T Consensus 252 KsLRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nak 331 (477)
T KOG2467|consen 252 KSLRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAK 331 (477)
T ss_pred ccccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 999999999999999876555 6788889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHH
Q 010058 367 KFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 367 ~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
.|+++|.++|++++++|+|+|+++||+++.|+++..+++.|+..+|.+|+|++|||.++..|++||||++++|+||+.|+
T Consensus 332 ala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~ 411 (477)
T KOG2467|consen 332 ALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEE 411 (477)
T ss_pred HHHHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCC
Q 010058 447 DFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFE 511 (519)
Q Consensus 447 di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~ 511 (519)
|+++++++|.++++.+.+++.+..+++++||++.+.+++...+++.+||++|++|+.+||+|+|+
T Consensus 412 df~~v~~fi~~av~i~~~~~~~~~~~~lkdf~~~~~~~~~~~~~v~~Lr~~Ve~fa~~fp~pg~~ 476 (477)
T KOG2467|consen 412 DFEKVADFIDRAVKIALEIQKEAGGKKLKDFKKFLSENKVMSEEVAELRKRVEEFAGQFPMPGFE 476 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhccCchhHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999887568999999999885443468999999999999999999985
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-96 Score=705.52 Aligned_cols=407 Identities=50% Similarity=0.817 Sum_probs=394.4
Q ss_pred hhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010058 55 APLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA 134 (519)
Q Consensus 55 ~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~ 134 (519)
..|...||+++++|.+|..||++.|+||||||++|+.|++|+++.|+|+|+||||+.|||+||+++|++|++|+++++++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCH
Q 010058 135 FQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDY 214 (519)
Q Consensus 135 ~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~ 214 (519)
||+++ +|||++||++||++++.+|++|||+|+.+++.||||++|+. +++++|..++.++|++|++++.||+
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDy 155 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDY 155 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCH
Confidence 99998 68999999999999999999999999999999999999997 7899999999999999999999999
Q ss_pred HHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCC
Q 010058 215 EQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 294 (519)
Q Consensus 215 d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gpr 294 (519)
|++++.+.++|||+|+++.|.|++.+|++++++||+++|++|++|+||++|+++.|++|+|++++|++|+||||+|+|||
T Consensus 156 D~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPr 235 (413)
T COG0112 156 DEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPR 235 (413)
T ss_pred HHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
||+|+++++ ++.+++++++||+.||+|++|.|||+++|++++.+++|++|++|+.+|++.|++.|.+
T Consensus 236 GG~Il~~~e-------------el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~ 302 (413)
T COG0112 236 GGIILTNDE-------------ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKE 302 (413)
T ss_pred ceEEEeccH-------------HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999985 8999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 375 RGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 375 ~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
+|+++++++|++|++++|+++.+++++.++..|++.||.+|+|.+|+|+ +++.+++||||++++|+|||+++||+++++
T Consensus 303 ~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~ 382 (413)
T COG0112 303 RGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIAD 382 (413)
T ss_pred cCCeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHH
Confidence 9999999999999999999977899999999999999999999999997 899999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCC
Q 010058 454 FFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTV 508 (519)
Q Consensus 454 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~ 508 (519)
+|.+++... + ...+++|++|.+||++||++
T Consensus 383 ~I~~vl~~~-----------------------~--~~~~~vk~~V~~l~~~fp~y 412 (413)
T COG0112 383 LIADVLDGL-----------------------K--DVPAEVKEEVAELCRRFPLY 412 (413)
T ss_pred HHHHHHhcc-----------------------c--hhHHHHHHHHHHHHHhCCCC
Confidence 999999742 1 34678999999999999986
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=4.7e-89 Score=696.63 Aligned_cols=456 Identities=54% Similarity=0.914 Sum_probs=423.7
Q ss_pred hhhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 010058 51 NQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 130 (519)
Q Consensus 51 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~ 130 (519)
.|.+..|++.||+|+++|.+|..||+++|+||||||++|+.|++++++.|+|+|+||||+.|||+|++++|++|.+|+++
T Consensus 123 ~~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~er 202 (586)
T PLN02271 123 AWGNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCER 202 (586)
T ss_pred HHHhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHH
Confidence 44556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCccccccccccc-CCceeeeeeeeEEEeeeeCCCC
Q 010058 131 ALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLDEST 209 (519)
Q Consensus 131 ~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~-~~~v~~~g~~~~~v~~~~d~~~ 209 (519)
++++||+++++||+||++.||+.||++++.++++|||+|++++++||||++|+++.. ...++..|..++.++|++|+++
T Consensus 203 a~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~ 282 (586)
T PLN02271 203 ALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQT 282 (586)
T ss_pred HHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccccc
Confidence 999999999999999999999999999999999999999999999999999997642 2367888999999999999889
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCc
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS 289 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~ 289 (519)
+.+|+|++++.+..++||+|+++.+.|++.+|+++|++||+++|+++++|+||++|+++.++.++|+.++|++++|+|||
T Consensus 283 g~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKt 362 (586)
T PLN02271 283 GYIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKS 362 (586)
T ss_pred CccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCccc
Confidence 99999999997777799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcceEEeecccccc--c----ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Q 010058 290 LRGPRGAMIFFRKGVKEI--N----KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLS 363 (519)
Q Consensus 290 l~GprgG~i~~~~~~~~~--~----~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~ 363 (519)
|+|||||+|+++++.+.. + +.+....+++.+++++++||+.+|+|+++.|+|++++++++..++|++|.+|+.+
T Consensus 363 LrGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~ 442 (586)
T PLN02271 363 LRGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKK 442 (586)
T ss_pred CCCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 999999999998764311 1 1122245678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 364 NSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 364 ~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
|++.|++.|.+.|+++++++|++|+++||+++.++++..+++.|+++||.+|+|.+|++.++..+++||||++++|+|||
T Consensus 443 NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~ 522 (586)
T PLN02271 443 NAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGC 522 (586)
T ss_pred HHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCC
Confidence 99999999999999999999999999999998899999999999999999999999999888899999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCC
Q 010058 444 VEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFE 511 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~ 511 (519)
.++||++++++|.+++....++|++. ++++++|++.+.+ + ..++++|++|.+|+++||+|+|+
T Consensus 523 ~e~d~~~iA~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~--~~i~~l~~~V~~~~~~fp~p~~~ 585 (586)
T PLN02271 523 LESDFETIADFLLRAAQIASAVQREH-GKLQKEFLKGLQN--N--KDIVELRNRVEAFASQFAMPGFD 585 (586)
T ss_pred CcHHHHHHHHHHHHHHhhhhhhhhhc-chhhhhhhhccCC--H--HHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999888888775 6688888877765 3 67899999999999999999875
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=2.4e-82 Score=634.70 Aligned_cols=399 Identities=55% Similarity=0.929 Sum_probs=337.5
Q ss_pred hhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC
Q 010058 57 LEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ 136 (519)
Q Consensus 57 l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g 136 (519)
|++.||++++++++|.+||+++|+|+||||++||.|++++++.+.|+|+||||+.|||+|++++|++|++|+++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHH
Q 010058 137 LDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQ 216 (519)
Q Consensus 137 ~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~ 216 (519)
++++.|++||++.||+.||++++.+|++|||+|+.+++.+|||++|++....+++...|..++.++|++|++++.||+|+
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99999999999999999999999999999999999999999999999976666677789999999999999999999999
Q ss_pred HHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcc
Q 010058 217 LEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 296 (519)
Q Consensus 217 l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG 296 (519)
+++.+.+++||+|+++.|+|++.+|+++|++||++.|++|++|++|.+|+++.++.++|++++|++++||||+|+|||||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
+|+++++.+..+..|.....++.++|++++||+.+|+|+++.++|++++++++..++|++|.+|+.+|++.|++.|.+.|
T Consensus 241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERG 320 (399)
T ss_dssp EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999654433344444445899999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
+++++++|++|+++++++..++++.++++.|+++||.+|+|.+|++.++..+++||||++.+|+|||+++||++++++|
T Consensus 321 ~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 321 FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp -EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 9999999999999999988889999999999999999999999999888889999999999999999999999999986
No 5
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.1e-75 Score=610.71 Aligned_cols=473 Identities=70% Similarity=1.102 Sum_probs=425.6
Q ss_pred cCCCchhhhhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHH
Q 010058 44 KAPAPWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 123 (519)
Q Consensus 44 ~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~l 123 (519)
++-+.++++.+..|++.||+++++|.+|..||+++|+||||||++|+.|++++.+.++++|++|||++|||+|+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~l 81 (475)
T PLN03226 2 KSMVSVPKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQI 81 (475)
T ss_pred cchhhhhhcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHH
Confidence 34455677777778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 124 ESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 124 e~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
|++|+++++++|+.+.+.|.+|++++||+.||++++.++++|||+|++++.+++||++|++......++..+..+..++|
T Consensus 82 E~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y 161 (475)
T PLN03226 82 ETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPY 161 (475)
T ss_pred HHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeee
Confidence 99999999999999988888899999999999999999999999999999999999999876554455666777888899
Q ss_pred eeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEE
Q 010058 204 RLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVT 283 (519)
Q Consensus 204 ~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~ 283 (519)
.++++++.+|++++++++.+++|++|+++.++||...|+++|+++|+++|+++++|+||.+|++..+..++|++++|+++
T Consensus 162 ~~~~~~g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~ 241 (475)
T PLN03226 162 RLDESTGLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVT 241 (475)
T ss_pred eecCCCCCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEE
Confidence 88888899999999999987789998887888999999999999999999999999999999999998888899999999
Q ss_pred EcCCCcccCCCcceEEeecccccccccCcc-hhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH
Q 010058 284 TTTHKSLRGPRGAMIFFRKGVKEINKQGQE-VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362 (519)
Q Consensus 284 ~S~~K~l~GprgG~i~~~~~~~~~~~~g~~-~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~ 362 (519)
+|+||||+||+||+|+++++... +..|+. .++++.+.++...++..+|+|+++.++|+++|++++...+++++++++.
T Consensus 242 ~t~hK~L~GP~Gg~I~~~~~~~~-~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~ 320 (475)
T PLN03226 242 TTTHKSLRGPRGGMIFFRKGPKP-PKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVK 320 (475)
T ss_pred ecCcccccCCCceEEEEchhhcc-cccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 99999999999999999875321 122222 3335666778888998899999999999999999998888999999999
Q ss_pred HHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCC
Q 010058 363 SNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 442 (519)
Q Consensus 363 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg 442 (519)
+|+++|++.|.+.|++++.+++++|++++++.+.++++.++.+.|+++||.++++.+|++.++..+++||+|++.+|+||
T Consensus 321 ~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g 400 (475)
T PLN03226 321 ANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRG 400 (475)
T ss_pred HHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCC
Confidence 99999999999999999998888999999998888999999999999999999999999888888999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCCccccccCC
Q 010058 443 FVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEKETMKYKN 519 (519)
Q Consensus 443 ~~~~di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~~~~~~~~ 519 (519)
++++||++++++|.+++.....+++++ ++++++|...+..+.+ .+.++++|++|.+||++||+|+++.++||||+
T Consensus 401 ~~~~d~~~ia~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~fp~~~~~~~~~~~~~ 475 (475)
T PLN03226 401 LVEKDFEKVAEFLHRAVTIALKIQKEH-GKKLKDFKKGLESNDF-SKDIEALRAEVEEFATSFPMPGFDKESMKYKE 475 (475)
T ss_pred CCHHHHHHHHHHHHHHHHHhhhhhhhc-ccchhhhhhhcccccc-HHHHHHHHHHHHHHHHhCCCCCCCccccccCC
Confidence 999999999999999999887777765 6778888665543211 25689999999999999999999999999986
No 6
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=2.9e-72 Score=573.17 Aligned_cols=430 Identities=37% Similarity=0.655 Sum_probs=384.9
Q ss_pred hhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010058 55 APLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA 134 (519)
Q Consensus 55 ~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~ 134 (519)
+.|++.||+++++|++|.+||+++|+||||||++|+.|++++++.++|+|+||||+.|||+||+++|++|.+|.++++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 55788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceEEeCCcHHHHHHHHHhhcCC-------------------------------CCEEEEecCCCccccccc
Q 010058 135 FQLDPAKWGVNVQSLSGSPANFQVYTALLKP-------------------------------HERIMALDLPHGGHLSHG 183 (519)
Q Consensus 135 ~g~~~~~~~~~V~~~sGs~a~~~~~~all~p-------------------------------GD~Vl~~~~~~~~~~~~~ 183 (519)
||+++ +||++.||+.||++++.++++| ||+|+.+++++|||++|+
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99998 6899999999999999999987 899999999999999999
Q ss_pred ccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhh
Q 010058 184 YQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHI 263 (519)
Q Consensus 184 ~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~ 263 (519)
+ ..++.|..+..++|+++++++.+|++++++.+++.+|++|++..|+++...|+++|+++|+++|+++++|+||.
T Consensus 184 ~-----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~ 258 (493)
T PRK13580 184 F-----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHF 258 (493)
T ss_pred c-----ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchh
Confidence 7 67788888999999999888999999999999986677777778999999999999999999999999999999
Q ss_pred hhccccCCCC---CCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHH
Q 010058 264 SGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTIS 340 (519)
Q Consensus 264 ~g~~~~~~~~---~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~ia 340 (519)
+|++..+..+ +|+.++||+++|+||+|+||+||+|++++ ++.+.++.+ .|+.+|+++++.++
T Consensus 259 ~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~--------------~l~~~L~~a-~P~i~gg~l~p~iA 323 (493)
T PRK13580 259 AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK--------------EYADAVDKG-CPLVLGGPLPHVMA 323 (493)
T ss_pred hceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH--------------HHHHHHhhC-CCcccCCCccHHHH
Confidence 9999877654 56779999999999999999999999998 677777766 48899999999999
Q ss_pred HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccC
Q 010058 341 GLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVP 420 (519)
Q Consensus 341 al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p 420 (519)
|++.++.++..++++++++++.+|+++|++.|.+.|++++.+++++|++++++...+.++..+.+.|.++||.++++.+|
T Consensus 324 A~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~P 403 (493)
T PRK13580 324 AKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIP 403 (493)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCC
Confidence 99999999887788999999999999999999999999987778999999998776666678888999999999999999
Q ss_pred CCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHH
Q 010058 421 GDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVE 499 (519)
Q Consensus 421 ~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 499 (519)
.++ +++.+++||||++++|+||++++||++++++|.++++.....+... |.++++ +...+ ...++++|++|.
T Consensus 404 tvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~~~~~~~~-~~~~~~--~~~~~----~~~~~~~~~~v~ 476 (493)
T PRK13580 404 SDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNTTPGTTAE-GAPSKA--KYELD----EGVAQEVRARVA 476 (493)
T ss_pred CCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhhhhccccc-cccccc--cccCC----HHHHHHHHHHHH
Confidence 987 6677899999999999999999999999999999998654332222 334433 22222 256889999999
Q ss_pred HHHhcCCC-CCCCcccc
Q 010058 500 EYAKRFPT-VGFEKETM 515 (519)
Q Consensus 500 ~~~~~~p~-~~~~~~~~ 515 (519)
+|+++||+ |+++.|++
T Consensus 477 ~~~~~~p~~~~~~~~~~ 493 (493)
T PRK13580 477 ELLARFPLYPEIDLETL 493 (493)
T ss_pred HHHHhCCCCCccCcccC
Confidence 99999998 77777763
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=9e-61 Score=501.07 Aligned_cols=441 Identities=62% Similarity=1.033 Sum_probs=380.7
Q ss_pred hhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~ 133 (519)
+..|++.||++++++.+|.+||+++|+|+||||++||.|++++.+.++++|++|+|+++||.|++..+.+|+.+++++++
T Consensus 12 ~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~ 91 (452)
T PTZ00094 12 NQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALE 91 (452)
T ss_pred hhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHH
Confidence 44578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCC
Q 010058 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYID 213 (519)
Q Consensus 134 ~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD 213 (519)
+||+++++|..+++++||+.+|.+++.++++|||+|++.+.+|++|++++.......+.+.+..+..+++++++ ++.+|
T Consensus 92 lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~id 170 (452)
T PTZ00094 92 AFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLID 170 (452)
T ss_pred HhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC-CCCcC
Confidence 99998877767788889999999999999999999999999999999987644333344556666667777775 48999
Q ss_pred HHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCC
Q 010058 214 YEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 293 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gp 293 (519)
++++++.+++.+|++|+++.+++|...|+++|.++|+++|+++++|++|..|.++.++.+.|+.++|++++|+||||+||
T Consensus 171 ~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP 250 (452)
T PTZ00094 171 YDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGP 250 (452)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCC
Confidence 99999999776899888777779999999999999999999999999999999998887777779999999999999999
Q ss_pred CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 010058 294 RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 294 rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (519)
+||+++++++... .+...++...+|..+|+++.+.+++++++++++...+++++.+++.+++++|.+.|.
T Consensus 251 ~Gg~l~~~~~~~~----------~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~ 320 (452)
T PTZ00094 251 RSGLIFYRKKVKP----------DIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALE 320 (452)
T ss_pred CceEEEEecccch----------HHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999774210 234455556778888999999999999999999777889999999999999999999
Q ss_pred hcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 374 ~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
+.|+++..+++++|..++.+...++++..+...|+++||.++++.+|++..+..+++||+|++.+|++|++++||+++++
T Consensus 321 ~~g~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~ 400 (452)
T PTZ00094 321 KRGYDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVAD 400 (452)
T ss_pred hCCcEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHH
Confidence 88999887655567788888777888899999999899999988888776556678999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCC
Q 010058 454 FFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGF 510 (519)
Q Consensus 454 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 510 (519)
+|.+++.....++++. +++..+|.+...+ ...+.++|++|.+||++||+|+.
T Consensus 401 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~ 452 (452)
T PTZ00094 401 FLDRAVKLAQEIQKQV-GKKLVDFKKALEK----NPELQKLRQEVVEFASQFPFPGI 452 (452)
T ss_pred HHHHHHHHHhhhhhhc-ccchhhhhhhccc----HHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999877666555 4344444433333 26788999999999999999973
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=2.7e-52 Score=431.90 Aligned_cols=411 Identities=51% Similarity=0.806 Sum_probs=351.4
Q ss_pred hhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 010058 52 QLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131 (519)
Q Consensus 52 ~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~ 131 (519)
++.+.|+++||+++++|++|..+|.+.|+|++|||+++|.|++++.+.+.++|..|+++.|+++|++.+.++|+.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999988889999999999999999999999899999
Q ss_pred HHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCC
Q 010058 132 LDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGY 211 (519)
Q Consensus 132 ~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~ 211 (519)
++++|.+. +.+.+.||+.||.+++.++++|||+|++.+..|++++..+. .....+..+..+.+++++.++.
T Consensus 84 a~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~ 154 (416)
T PRK13034 84 KQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA-----KVSLSGKWYNAVQYGVDRLTGL 154 (416)
T ss_pred HHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC-----cceeccceeeeEEcccccccCC
Confidence 99999986 44667899999999999999999999999999988766554 2222334444445667766788
Q ss_pred CCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCccc
Q 010058 212 IDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR 291 (519)
Q Consensus 212 iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~ 291 (519)
+|++++++.+...+||+|+++.+.+|...|+++|.++|+++|+++++|+||+.|.+..+....++.++|++++|+||+|+
T Consensus 155 ~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~ 234 (416)
T PRK13034 155 IDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLR 234 (416)
T ss_pred cCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCC
Confidence 99999999886668999988766789999999999999999999999999999999888777777789999999999999
Q ss_pred CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHH
Q 010058 292 GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371 (519)
Q Consensus 292 GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (519)
||.||+++++++ .+...++...+++.+++++.+.+++++.++.+....+..++++++.+|+++|++.
T Consensus 235 g~~GG~v~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~ 301 (416)
T PRK13034 235 GPRGGMILTNDE-------------EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEV 301 (416)
T ss_pred CCCCeEEEECcH-------------HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 999999988774 4555566667777677778888888887877765555678899999999999999
Q ss_pred HHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 372 L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
|.+.|+++..++++++..++.+...+.+...+.+.|+++||.++...+|++. .|..+++||+|++.+|++|++++|+++
T Consensus 302 L~~~G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~ 381 (416)
T PRK13034 302 LKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFRE 381 (416)
T ss_pred HHHcCCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHH
Confidence 9999999875446788888888776767788889999999999988788865 666788999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCC
Q 010058 451 VAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPT 507 (519)
Q Consensus 451 l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~ 507 (519)
++++|.+++... + + ...++.+|++|.+|++.||+
T Consensus 382 l~~~l~~~~~~~--------------------~--~-~~~~~~~~~~~~~~~~~~~~ 415 (416)
T PRK13034 382 IANWILDVLDDL--------------------G--N-AALEQRVRKEVKALCSRFPI 415 (416)
T ss_pred HHHHHHHHHhcC--------------------C--C-HHHHHHHHHHHHHHHHhCCC
Confidence 999999998621 0 1 14578999999999999997
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=1.2e-47 Score=399.87 Aligned_cols=412 Identities=52% Similarity=0.828 Sum_probs=336.5
Q ss_pred hhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 010058 53 LNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 132 (519)
Q Consensus 53 ~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~ 132 (519)
+...|++.||+++++|+++..++++.|+|++++|++++.|++++...+.+.|..|+++++++.+.+..+.+|+.++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la 81 (416)
T PRK00011 2 FMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAK 81 (416)
T ss_pred cchhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHH
Confidence 34568999999999999998999999999999999999999999998887788899999999998899999988999999
Q ss_pred HHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCC
Q 010058 133 DAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYI 212 (519)
Q Consensus 133 ~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~i 212 (519)
+++|++++ +|.++||+.++..++.++++|||+|++++++|+++.+++.. +.+.+...+.+.++++++++.+
T Consensus 82 ~~~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~ 152 (416)
T PRK00011 82 ELFGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSP-----VNFSGKLYNVVSYGVDEETGLI 152 (416)
T ss_pred HHhCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccc-----cccccceeeEeecCcCcccCCc
Confidence 99999873 58888998888889999999999999999999888765431 1122222334445555556889
Q ss_pred CHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccC
Q 010058 213 DYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 292 (519)
Q Consensus 213 D~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~G 292 (519)
|++++++++++.+|++|+++.+++|...|+++|.++|+++|+++|+|++|+.|.+..+..+.++.++|++++|+||+++|
T Consensus 153 d~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g 232 (416)
T PRK00011 153 DYDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRG 232 (416)
T ss_pred CHHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCC
Confidence 99999999976689999998777898889999999999999999999999988876555555555789999999999999
Q ss_pred CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 293 PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 293 prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
|+||+++++++ ++.+++.....++..+++....++++..++......+++++.+++.++++++.+.|
T Consensus 233 ~~gg~i~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L 299 (416)
T PRK00011 233 PRGGLILTNDE-------------ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEAL 299 (416)
T ss_pred CCceEEEeCCH-------------HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999753 56666665556666667777788887777766555567889999999999999999
Q ss_pred HhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 373 ~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
.+.|+++...++.++++++.+.+.+++..++.+.|.+.||.++....|.+. .+..+.++|+++...+++|++++|++++
T Consensus 300 ~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l 379 (416)
T PRK00011 300 AERGFRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEI 379 (416)
T ss_pred HhCCCeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHH
Confidence 999988764334557778877554556778889999999999866555543 4455678999988888899999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCC
Q 010058 452 AEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVG 509 (519)
Q Consensus 452 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 509 (519)
++.|++++.... + + +.+++++++|.+|+++||.+.
T Consensus 380 ~~~l~~~~~~~~-------------------~--~--~~~~~~~~~~~~~~~~~~~~~ 414 (416)
T PRK00011 380 AELIADVLDNPD-------------------D--E--AVIEEVKEEVKELCKRFPLYK 414 (416)
T ss_pred HHHHHHHHhccC-------------------c--c--hhHHHHHHHHHHHHHhCCCCC
Confidence 999999876321 0 1 456899999999999999643
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=5.5e-45 Score=378.25 Aligned_cols=383 Identities=58% Similarity=0.918 Sum_probs=318.4
Q ss_pred hcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 010058 59 EIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD 138 (519)
Q Consensus 59 ~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~ 138 (519)
++|++++++|..|..++++.|+|++++++++|.|++++.+.+..+|..|+|+.++|++.++.+.+++.+++++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 57999999999998888999999999999999999999998888898899999999999999999998999999999998
Q ss_pred CCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHH
Q 010058 139 PAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 139 ~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~ 218 (519)
+ ++|.+++|+.|+..++.++++|||+|++.+++|+++..++... .+...|..+..++++.+++++.+|+++++
T Consensus 82 ~----~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l~ 154 (402)
T cd00378 82 Y----ANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDALE 154 (402)
T ss_pred c----eeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHHH
Confidence 6 3588888988999899999999999999999999887765421 13344655566666555446899999999
Q ss_pred HHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceE
Q 010058 219 KSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMI 298 (519)
Q Consensus 219 ~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i 298 (519)
+.+.+.++++|+++.+++|...|+++|.++|+++|+++++|++|+.|.+..+..+.++.++|++++|+||+++||+||++
T Consensus 155 ~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i 234 (402)
T cd00378 155 KMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLI 234 (402)
T ss_pred HHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEE
Confidence 99976689999988777898889999999999999999999999888876654444455789999999999999999999
Q ss_pred EeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCE
Q 010058 299 FFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYD 378 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 378 (519)
+++++ ++.+++.....++..++++...+++++.++......+++++++++.++++++.+.|.+.|+.
T Consensus 235 ~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 301 (402)
T cd00378 235 LTRKG-------------ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFK 301 (402)
T ss_pred EeccH-------------HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 99874 45555555455666677777888888888876655467888899999999999999999998
Q ss_pred EecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCC-CCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 379 LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~-~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
++.....++++|+++.+.+.+...+.+.|+++||.++....|+... +..+.++|++++..+++|++++|++++++.|.+
T Consensus 302 ~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 302 VVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred EeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 8754345778888886545567778888999999998765666642 345678999999999889999999999999999
Q ss_pred HHHH
Q 010058 458 AVKL 461 (519)
Q Consensus 458 ~l~~ 461 (519)
++..
T Consensus 382 ~~~~ 385 (402)
T cd00378 382 ALKD 385 (402)
T ss_pred HHhc
Confidence 8874
No 11
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.8e-36 Score=304.28 Aligned_cols=363 Identities=20% Similarity=0.225 Sum_probs=283.5
Q ss_pred Ceeec-CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 78 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 78 ~i~L~-a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
.+.|. +.....|..|.+++...+.+.+ .++++..+.......+..+.+|+.+++++|+++. .+|.+|+|++ +.
T Consensus 23 ~vylD~aa~~~~p~~V~~a~~~~~~~~~--an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~---~eIvft~~tT~al 97 (405)
T COG0520 23 LVYLDNAATSQKPQAVLDAVAEYYRRYN--ANVHRGAHTLAEEATDLYEAAREAVARFLNADSS---DEIVFTRGTTEAL 97 (405)
T ss_pred eEEecCcccccCCHHHHHHHHHHHHhhc--CCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCChhHHH
Confidence 34553 3344579999999999887644 3444333344455666778999999999999862 2699999998 66
Q ss_pred HHHHHhh---cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 156 FQVYTAL---LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 156 ~~~~~al---l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
..+..++ +++||+|++.+.+|.+...++.....+ .|..++.+| ++ +++.+|.|+++..+++ +||+|.++
T Consensus 98 n~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~----~Ga~v~~i~--~~-~~g~~~~~~~~~~i~~-~Tklvais 169 (405)
T COG0520 98 NLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKR----TGAKVRVIP--LD-DDGLLDLDALEKLITP-KTKLVALS 169 (405)
T ss_pred HHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHh----cCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CceEEEEE
Confidence 6577777 799999999999999999888754432 255556665 44 5789999999998887 99999999
Q ss_pred -ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--ccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEI 307 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~~~ 307 (519)
.|| +|...|+++|.++|+++|+++++|++|+.|..+.++... ++|++++|+||||.||.| |+++++++. .+.
T Consensus 170 ~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l---~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~ 246 (405)
T COG0520 170 HVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL---GCDFLAFSGHKWLLGPTGIGVLYVRKELLEELE 246 (405)
T ss_pred CccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc---CCCEEEEcccccccCCCceEEEEEchHHHhhcC
Confidence 777 899999999999999999999999999999999998877 899999999999999988 999999976 344
Q ss_pred c-ccCcc-hhhhHH-H--HhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEec
Q 010058 308 N-KQGQE-VMYAYE-D--KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVS 381 (519)
Q Consensus 308 ~-~~g~~-~~~~~~-~--~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 381 (519)
| ..|+. +.+.-. . .++........|+|+.....++.+|++.++..+++.+.++.+++.+++.+.|+++ +++++.
T Consensus 247 P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g 326 (405)
T COG0520 247 PFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYG 326 (405)
T ss_pred CcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Confidence 6 33433 211110 1 1111112223499999999999999999999899999999999999999999999 788887
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccc---cCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNT---VPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~---~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
++......++.+...+++..++...|.+.||.++... .|........+.+|+|++.+|| ++|++++++.|+++
T Consensus 327 ~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt----~edid~l~~aL~~~ 402 (405)
T COG0520 327 PPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT----EEDVDRLLEALKKA 402 (405)
T ss_pred CCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCC----HHHHHHHHHHHHHH
Confidence 6443456677777778889999999999999998531 2221111234559999999999 99999999999987
Q ss_pred HH
Q 010058 459 VK 460 (519)
Q Consensus 459 l~ 460 (519)
..
T Consensus 403 ~~ 404 (405)
T COG0520 403 LA 404 (405)
T ss_pred hh
Confidence 63
No 12
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-33 Score=276.29 Aligned_cols=346 Identities=19% Similarity=0.270 Sum_probs=271.3
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHh
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTA 161 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~a 161 (519)
+...++.|.|+++|...++..| |+|.+-+..|.+ ..++-+.+|+.+++++|++++ +|++|||++ +|..++.+
T Consensus 8 ~ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~-A~~~ve~AR~~iA~llga~~~----eIiFTSG~TEsnNlaI~g 80 (386)
T COG1104 8 AATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGRE-ARKAVEEAREQIAKLLGADPE----EIIFTSGATESNNLAIKG 80 (386)
T ss_pred cccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHH-HHHHHHHHHHHHHHHhCCCCC----eEEEecCCcHHHHHHHHh
Confidence 3445789999999999999877 999885544433 445556889999999999985 599999998 76666666
Q ss_pred h--c----CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 162 L--L----KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 162 l--l----~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
. . +.|..|+++..+|.+.+.+..++... |..+..++ ++ .+|.+|+++|++++++ +|.+|.+. .+
T Consensus 81 ~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~-----g~~Vtyl~--V~-~~G~v~~e~L~~al~~-~T~LVSim~aN 151 (386)
T COG1104 81 AALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQ-----GFEVTYLP--VD-SNGLVDLEQLEEALRP-DTILVSIMHAN 151 (386)
T ss_pred hHHhhhcccCCCeEEEcccccHHHHHHHHHHHhc-----CCeEEEeC--CC-CCCeEcHHHHHHhcCC-CceEEEEEecc
Confidence 2 1 25789999999999998877654222 44444554 45 3699999999999997 78888888 44
Q ss_pred c-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-ccC
Q 010058 235 A-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQG 311 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~~g 311 (519)
| +|.+.|+++|.++|+++++++++|++|+.|-++.++... ++|++++|.|| +.||+| |+++.++..++.| +.|
T Consensus 152 nE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~---~vD~ls~SaHK-~~GpkGiGaLyv~~~~~~~p~i~G 227 (386)
T COG1104 152 NETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL---GVDLLSFSAHK-FGGPKGIGALYVRPGVRLEPLIHG 227 (386)
T ss_pred cCeeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc---CcceEEeehhh-ccCCCceEEEEECCCCccCceecc
Confidence 4 899999999999999999999999999999999887766 69999999999 789999 9999988888888 777
Q ss_pred cchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCccee
Q 010058 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYDLVSGGTENHLV 389 (519)
Q Consensus 312 ~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~ 389 (519)
|.+... .+.||.+.+.+++++.|++.... +++....++...+++|.+.|.+. ++.+.......-..
T Consensus 228 GgQE~g-----------~RsGTenv~~Ivg~~~A~~~a~~-~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~ 295 (386)
T COG1104 228 GGQERG-----------LRSGTENVPGIVGFGKAAEIAVE-ELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPN 295 (386)
T ss_pred CcCCCC-----------CCCCCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCC
Confidence 765322 23589999999999999998754 67888999999999999999986 34443322221122
Q ss_pred eeeccCCCCcHHHHHHhhcccCeEEcccc-cCCC-CC------------CCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 390 LVNLRNKGIDGSRVEKVLESVHIAANKNT-VPGD-VS------------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 390 ~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-~p~~-~~------------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
.+.+..+++.++.+...|+.+||.++..+ |... .. ....+.||||+...|| ++|++++++.+
T Consensus 296 ~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt----~eei~~~~~~l 371 (386)
T COG1104 296 ILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTT----EEEIDAAAEAL 371 (386)
T ss_pred eEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCC----HHHHHHHHHHH
Confidence 34445557889999999999999998643 1111 01 1235789999999999 99999999999
Q ss_pred HHHHHHHhh
Q 010058 456 DAAVKLALK 464 (519)
Q Consensus 456 ~~~l~~~~~ 464 (519)
.+++....+
T Consensus 372 ~~~i~~lr~ 380 (386)
T COG1104 372 KEIIKRLRE 380 (386)
T ss_pred HHHHHHHhh
Confidence 999986543
No 13
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-30 Score=266.72 Aligned_cols=342 Identities=17% Similarity=0.181 Sum_probs=250.7
Q ss_pred ccCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..+++ ++|+.+.+++...+.+. .. . |...+++.+|++++.+++.+.+|++.+.= .+|++|+|++
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~----~~--~-Y~~~~G~~~LReaia~~~~~~~~~~~~~~-~eiivt~Ga~ 99 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEG----GT--H-YTPSAGIPELREAIAEKYKRRYGLDVDPE-EEIIVTAGAK 99 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcc----cC--C-CCCCCCCHHHHHHHHHHHHHHhCCCCCCC-CeEEEeCCHH
Confidence 35799998887 67889999999988772 11 2 33667889999999999999999643210 2499999999
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
|+..+++++++|||+|+++++.+ ..+...+.+.|.....+++.....++.+|+++|++++++ |||+|+++
T Consensus 100 ~al~~~~~a~~~pGDeVlip~P~Y--------~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln 170 (393)
T COG0436 100 EALFLAFLALLNPGDEVLIPDPGY--------PSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILN 170 (393)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCC--------cCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEe
Confidence 99999999999999999999444 444445667787777776532214789999999999999 99999998
Q ss_pred -ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCCCC-----CCeEEEEcCCCc--ccCCCcceEE
Q 010058 233 -ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSPFE-----YADVVTTTTHKS--LRGPRGAMIF 299 (519)
Q Consensus 233 -~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p~~-----~~di~~~S~~K~--l~GprgG~i~ 299 (519)
|+| ||...+ +++|.++|++||++||+|++ +.+++..+. +.+.+. ..-|++.|++|+ |+|||.||++
T Consensus 171 ~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi-Y~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v 249 (393)
T COG0436 171 SPNNPTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVV 249 (393)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh-hhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEee
Confidence 777 886665 67888899999999999999 456666653 443332 235777889996 5899999999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC-HhHHHHHHHHHHHHHHHHHHHHhc-CC
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT-PEYKAYQEQVLSNSSKFARSLLER-GY 377 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~ 377 (519)
+++. ++.+.+.+.. .....+++.....|...||+.-.. ...+..++.++++++.+.+.|.+. |+
T Consensus 250 ~~~~-------------~l~~~~~~~~-~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~ 315 (393)
T COG0436 250 GPPE-------------ELIAALRKLK-SYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGL 315 (393)
T ss_pred cChH-------------HHHHHHHHHH-HhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 9942 4444433211 112234455555555667775432 345777789999999999999988 58
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHH-HHhhcccCeEEcccccCCCC-CC-CCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRV-EKVLESVHIAANKNTVPGDV-SA-MVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~L~~~gI~v~~~~~p~~~-~~-~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
.+..++..+.+.++++... .++.++ .++|++.||.+. ||.. +. .+.++||+++. ++ ++++++.++.
T Consensus 316 ~~~~~p~Ga~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v~----PG~~Fg~~~g~~~vRis~~--~~----~~~l~~a~~r 384 (393)
T COG0436 316 SVVKPPEGAFYLFPKIPEL-LDSEEFAKKLLEEAGVAVV----PGSGFGEPPGEGYVRLSLA--TS----EETLEEALRR 384 (393)
T ss_pred eeccCCCeeEEEEeecCCC-CCHHHHHHHHHHhCCEEEe----cccccCCCCCCCeEEEEEe--cC----HHHHHHHHHH
Confidence 8877444567778877653 455555 556788999995 8887 54 36789999964 23 5777777777
Q ss_pred HHHHHH
Q 010058 455 FDAAVK 460 (519)
Q Consensus 455 l~~~l~ 460 (519)
|.+.+.
T Consensus 385 l~~~~~ 390 (393)
T COG0436 385 LARFLA 390 (393)
T ss_pred HHHHHH
Confidence 777665
No 14
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.98 E-value=2.1e-30 Score=268.80 Aligned_cols=359 Identities=17% Similarity=0.200 Sum_probs=256.2
Q ss_pred Ceeec-CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCcHH-H
Q 010058 78 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL-DPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 78 ~i~L~-a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~-~~~~~~~~V~~~sGs~-a 154 (519)
.+.|. ++..++|+.|.+++.+.+.+.+ ++++...+.......+..+.+++.+++++|+ +++ +|.+++|++ +
T Consensus 20 ~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~----~i~~~~~~t~~ 93 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK----NIVWTRGTTES 93 (401)
T ss_pred eEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC----EEEEECCHHHH
Confidence 46664 5666889999999999887644 5544321211223344455677999999999 553 699999988 7
Q ss_pred HHHHHHhh----cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 155 NFQVYTAL----LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 155 ~~~~~~al----l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
+..++.++ ++|||+|++++++|.+.+.++... ....|..++.++. + +++.+|++++++.+++ +|++|+
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----~~~~g~~v~~v~~--~-~~~~~d~~~l~~~i~~-~t~lv~ 165 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMV----AQQTGAKVVKLPL--G-ADRLPDVDLLPELITP-RTRILA 165 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHH----HHHhCCEEEEEec--C-CCCcCCHHHHHHhcCc-CcEEEE
Confidence 77677777 489999999998887754433311 1234655666654 3 3578999999999987 899998
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--c
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--K 305 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~ 305 (519)
++ ++| +|...|+++|.++|+++|+++++|++|..|.++.++... ++|++++|+|| +.||.| |+++++++. .
T Consensus 166 i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~---~~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~ 241 (401)
T PRK10874 166 LGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQAL---DIDFYAFSGHK-LYGPTGIGVLYGKSELLEA 241 (401)
T ss_pred EeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhc---CCCEEEEeccc-ccCCCccEEEEEchHHHhc
Confidence 88 566 899999999999999999999999999888776555433 68999999999 567887 999988764 2
Q ss_pred cccccCcchhhhHH--HHhhhccc--CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEe
Q 010058 306 EINKQGQEVMYAYE--DKINQAVF--PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLV 380 (519)
Q Consensus 306 ~~~~~g~~~~~~~~--~~i~~~~~--~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 380 (519)
+.++.|+....... ........ ....|+++...++++.+|++.+.+.+++...++..++++++.+.|+++ |+.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~ 321 (401)
T PRK10874 242 MSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSF 321 (401)
T ss_pred CCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 33333322100000 00000001 112489999999999999998877778888899999999999999987 88876
Q ss_pred cCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC---CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 381 SGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV---SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 381 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
.+. .+.++.+.+ .+++..++.+.|.++||.++....+... .....++||+|++.++| ++|+++++++|++
T Consensus 322 ~~~-~~~i~~~~~--~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt----~edid~ll~al~~ 394 (401)
T PRK10874 322 RCQ-DSSLLAFDF--AGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT----QSDVDALVNAVDR 394 (401)
T ss_pred CCC-CCcEEEEEE--CCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCC----HHHHHHHHHHHHH
Confidence 542 234444443 3456788889998999999742211100 00124789999999999 9999999999998
Q ss_pred HHHH
Q 010058 458 AVKL 461 (519)
Q Consensus 458 ~l~~ 461 (519)
++..
T Consensus 395 ~~~~ 398 (401)
T PRK10874 395 ALEL 398 (401)
T ss_pred HHHH
Confidence 8763
No 15
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.98 E-value=4.5e-30 Score=266.08 Aligned_cols=358 Identities=17% Similarity=0.168 Sum_probs=252.6
Q ss_pred Ceeec-CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCcHH-H
Q 010058 78 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 78 ~i~L~-a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~sGs~-a 154 (519)
.+.|. ++..++|+.|++++.+.+...+ ++++...+.......+..+.+++.+++++|++ ++ +|.+++|++ +
T Consensus 17 ~iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~----~i~~t~g~t~~ 90 (398)
T TIGR03392 17 TVYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE----NIVWTRGTTES 90 (398)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCChHHH
Confidence 46664 5666889999999999886533 44433212222223344456779999999995 43 588999988 7
Q ss_pred HHHHHHhh----cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 155 NFQVYTAL----LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 155 ~~~~~~al----l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
+..++.++ ++|||+|++++++|.+...++.. .....|..++.++. + .++.+|++++++++++ +|++|+
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~----~~~~~g~~v~~v~~--~-~~~~~~~~~l~~~i~~-~t~lv~ 162 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLM----VAQQTGAKVVKLPI--G-ADLLPDIRQLPELLTP-RTRILA 162 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHH----HHHHcCcEEEEEec--C-CCCCcCHHHHHHHhcc-CceEEE
Confidence 77677777 58999999999888775433321 11233555555553 4 3467899999999987 899998
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--c
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--K 305 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~ 305 (519)
++ ++| +|...|+++|.++|+++|+++++|++|..|....++... ++|++++|+|| +.||.| |+++++++. .
T Consensus 163 i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~---~~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~ 238 (398)
T TIGR03392 163 LGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQAL---DIDFYAFSGHK-LYGPTGIGVLYGKTELLEA 238 (398)
T ss_pred EECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhc---CCCEEEEeccc-ccCCCceEEEEEcHHHHhh
Confidence 88 666 899999999999999999999999999887765544433 68999999999 557877 999988754 2
Q ss_pred cccccCcchhhhHH--HHhhhccc--CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEe
Q 010058 306 EINKQGQEVMYAYE--DKINQAVF--PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLV 380 (519)
Q Consensus 306 ~~~~~g~~~~~~~~--~~i~~~~~--~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 380 (519)
+.++.|+....... ........ ....|+++...++++.+|++.+.+.++++..++..++++++.+.|.++ |+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~ 318 (398)
T TIGR03392 239 MPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSF 318 (398)
T ss_pred CCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 33333322100000 00000001 112489999999999999998877778888899999999999999987 88776
Q ss_pred cCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC---CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 381 SGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV---SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 381 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
... .+.++.+.+ .++++.++.+.|.++||.++........ .....++||+|++.++| ++|++++++.|++
T Consensus 319 ~~~-~~~i~~~~~--~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t----~~ei~~l~~~l~~ 391 (398)
T TIGR03392 319 RCP-GSSLLAFDF--AGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT----QQDVDALVDAVGA 391 (398)
T ss_pred CCC-CCcEEEEEe--CCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCC----HHHHHHHHHHHHH
Confidence 432 233444333 3567788999999999999732110000 00124689999999999 9999999999998
Q ss_pred HHH
Q 010058 458 AVK 460 (519)
Q Consensus 458 ~l~ 460 (519)
++.
T Consensus 392 ~~~ 394 (398)
T TIGR03392 392 ALE 394 (398)
T ss_pred HHH
Confidence 875
No 16
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.98 E-value=3.9e-30 Score=267.19 Aligned_cols=358 Identities=15% Similarity=0.126 Sum_probs=254.4
Q ss_pred Ceeec-CCCCCCcHHHHHHHhhHhhhccCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCcHH-
Q 010058 78 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALDAFQL-DPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 78 ~i~L~-a~en~~~~~V~ea~~~~l~~~~~~g~p~~-~~y~~~~~~~~le~~~~~~~~~~~g~-~~~~~~~~V~~~sGs~- 153 (519)
.+.|. ++..++|+.|++++.+.+...+ +++.. .+..+.+ .....+.+++.+++++|+ +++ +|.+++|++
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~r~~la~~~~~~~~~----~v~~t~g~t~ 96 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQ-ATEKMENVRKQAALFINARSAE----ELVFVRGTTE 96 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcC--CCCCCcccHHHHH-HHHHHHHHHHHHHHHcCcCCCC----eEEEeCCHHH
Confidence 36664 5667889999999999887544 33322 1211222 333344677999999998 453 599999988
Q ss_pred HHHHHHHh----hcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 154 ANFQVYTA----LLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 154 a~~~~~~a----ll~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
++..++.+ +++|||+|++.+.+|.+...++... ....|..++.++ ++ +++.+|++++++++++ +|++|
T Consensus 97 ~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv 168 (406)
T PRK09295 97 GINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQML----CARVGAELRVIP--LN-PDGTLQLETLPALFDE-RTRLL 168 (406)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHH----HHHcCcEEEEEe--cC-CCCCCCHHHHHHhcCC-CcEEE
Confidence 76666665 4689999999998887765444321 122355555554 34 3577999999999987 89999
Q ss_pred EEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--
Q 010058 230 VAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV-- 304 (519)
Q Consensus 230 i~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~-- 304 (519)
+++ ++| +|...|+++|.++|+++|+++++|++|..|..+.++... ++|++++|+|| +.||.| |+++++++.
T Consensus 169 ~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~D~~~~s~~K-~~gp~G~G~l~~~~~~~~ 244 (406)
T PRK09295 169 AITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQAL---DCDFYVFSGHK-LYGPTGIGILYVKEALLQ 244 (406)
T ss_pred EEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhc---CCCEEEeehhh-ccCCCCcEEEEEchHhHh
Confidence 998 666 899999999999999999999999999888776655444 68999999999 668887 999998864
Q ss_pred ccccccCc-ch--hhhHHHH--hhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 305 KEINKQGQ-EV--MYAYEDK--INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 305 ~~~~~~g~-~~--~~~~~~~--i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
.+.++.|+ .. ....... ..........|+++...+.++.+|++++.+.+++...++..++++++.+.|.++ |++
T Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~ 324 (406)
T PRK09295 245 EMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLT 324 (406)
T ss_pred hCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 23333332 21 0011000 000001123489999999999999999887788889999999999999999988 788
Q ss_pred EecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC---CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 379 LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV---SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
++.+.. +..++.+...+.++.++.+.|++.||.++........ ....++.+|+|++.+|| ++|++++++.|
T Consensus 325 ~~~~~~--~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt----~~did~l~~~l 398 (406)
T PRK09295 325 LYGPQN--RLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNT----HEEVDRLVAGL 398 (406)
T ss_pred EeCCCC--CceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCC----HHHHHHHHHHH
Confidence 876532 2233444334566788888999999999742111000 00124579999999999 99999999999
Q ss_pred HHHHH
Q 010058 456 DAAVK 460 (519)
Q Consensus 456 ~~~l~ 460 (519)
+++..
T Consensus 399 ~~i~~ 403 (406)
T PRK09295 399 QRIHR 403 (406)
T ss_pred HHHHH
Confidence 88754
No 17
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.97 E-value=1.5e-29 Score=258.34 Aligned_cols=344 Identities=16% Similarity=0.098 Sum_probs=240.4
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-cHHHHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS-GSPANFQ 157 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s-Gs~a~~~ 157 (519)
++++|++.++|+.|++++.+.+.+ + + | ....++.+.+++.+++++|++.+. .+++++ |+.++..
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~-----~---~-~---~~~~~~~~~~~~~la~~~g~~~~~---~~~~~~~~t~al~~ 65 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLG-----H---R-S---PEFLALMDEILEGLRYVFQTENGL---TFLLSGSGTGAMEA 65 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccC-----C---C-C---HHHHHHHHHHHHHHHHHhcCCCCC---EEEEecCcHHHHHH
Confidence 468999999999999999754322 1 1 1 123344556669999999995432 355555 4558888
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA- 235 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn- 235 (519)
++.++++|||+|++.+..|.+.. .. ..+...|..+..++ .++ ++.+|++++++.+++++|++|+++ ++|
T Consensus 66 ~~~~~~~~g~~vl~~~~~~~~~~--~~----~~~~~~g~~~~~v~--~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~ 136 (356)
T cd06451 66 ALSNLLEPGDKVLVGVNGVFGDR--WA----DMAERYGADVDVVE--KPW-GEAVSPEEIAEALEQHDIKAVTLTHNETS 136 (356)
T ss_pred HHHHhCCCCCEEEEecCCchhHH--HH----HHHHHhCCCeEEee--cCC-CCCCCHHHHHHHHhccCCCEEEEeccCCC
Confidence 99999999999999876554421 11 01223355555555 342 478999999999986689999888 545
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--cccccCc
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQGQ 312 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~~g~ 312 (519)
+|...|+++|.++|+++|+++++|++|..|..+...... ++|++++|+||++++|.| |+++.+++.. +....+.
T Consensus 137 ~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~ 213 (356)
T cd06451 137 TGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEW---GVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKP 213 (356)
T ss_pred cccccCHHHHHHHHHhcCCEEEEeeehhccCcccccccc---CccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCC
Confidence 899999999999999999999999999887655433332 689999999999999877 9999987431 1100000
Q ss_pred c-hhhhHHHHhhhc-ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC--Ccce
Q 010058 313 E-VMYAYEDKINQA-VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGT--ENHL 388 (519)
Q Consensus 313 ~-~~~~~~~~i~~~-~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~--~~~~ 388 (519)
. ...+........ ......++++...++++.++++.+...+++...++..++++++.+.|.+.|+++..+.. .+.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 293 (356)
T cd06451 214 KGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTV 293 (356)
T ss_pred CceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCce
Confidence 0 000000000000 00123467888888888899988877778889999999999999999999988875321 1222
Q ss_pred eeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 389 VLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 389 ~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.++.+ +.+.+..++.+.|.+. ||.++ |+.. +..+++||++++.+++ ++|++++++.|++++
T Consensus 294 ~~~~~-~~~~~~~~~~~~L~~~~gI~~~----~g~~-~~~~~~iRis~~~~~~----~e~v~~~~~~l~~~~ 355 (356)
T cd06451 294 TAVLV-PEGVDGDEVVRRLMKRYNIEIA----GGLG-PTAGKVFRIGHMGEAT----REDVLGVLSALEEAL 355 (356)
T ss_pred EEEEC-CCCCCHHHHHHHHHHhCCEEEe----cccc-cccCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 23333 3356778899998887 99996 4332 2234689999999888 899999999998876
No 18
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.97 E-value=1.2e-29 Score=264.96 Aligned_cols=363 Identities=14% Similarity=0.122 Sum_probs=254.5
Q ss_pred Ceeec-CCCCCCcHHHHHHHhhHhhhccCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 78 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 78 ~i~L~-a~en~~~~~V~ea~~~~l~~~~~~g~p~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
.+.|. ++..++|+.|++++.+.+.+.+ +++.. .++.+....+ ..+.+++.+++++|++.. .+|.+++|++ +
T Consensus 33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~r~~la~~~~~~~~---~~v~~t~g~t~a 106 (424)
T PLN02855 33 LVYLDNAATSQKPAAVLDALQDYYEEYN--SNVHRGIHALSAKATD-AYELARKKVAAFINASTS---REIVFTRNATEA 106 (424)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCccchHHHHHHH-HHHHHHHHHHHHcCCCCC---CEEEEeCCHHHH
Confidence 45564 4556788999999998886633 33322 2222222333 335677999999999532 2699999988 6
Q ss_pred HHHHHHh----hcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 155 NFQVYTA----LLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 155 ~~~~~~a----ll~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
+..++.+ .++|||+|++++.+|++....+... ....|..++.++ +++ ++.+|++++++.+++ +|++|+
T Consensus 107 l~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----a~~~g~~v~~v~--~~~-~~~~~~~~l~~~i~~-~t~lv~ 178 (424)
T PLN02855 107 INLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLV----AQKTGAVLKFVG--LTP-DEVLDVEQLKELLSE-KTKLVA 178 (424)
T ss_pred HHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHH----HHHcCCEEEEEe--cCC-CCCcCHHHHHHHhcc-CceEEE
Confidence 6656665 4689999999998887765433211 122355555555 342 356999999999987 899999
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--c
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--K 305 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~ 305 (519)
++ ++| +|...|+++|.++|+++|+++++|++|..|..+.++... ++|++++|+|| +.||.| |+++++++. +
T Consensus 179 i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~ 254 (424)
T PLN02855 179 THHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTL---GADFLVASSHK-MCGPTGIGFLWGKSDLLES 254 (424)
T ss_pred EeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhc---CCCEEEeeccc-ccCCCccEEEEEchhhhhc
Confidence 88 566 899999999999999999999999999888766555443 68999999999 678887 999998864 3
Q ss_pred cccc-cCcchh-hhH--HHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEe
Q 010058 306 EINK-QGQEVM-YAY--EDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLV 380 (519)
Q Consensus 306 ~~~~-~g~~~~-~~~--~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 380 (519)
+.|+ .|+... ... .............||++...++++..+++++.+.++++..++..+.++++.+.|+++ |++++
T Consensus 255 ~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~ 334 (424)
T PLN02855 255 MPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIY 334 (424)
T ss_pred CCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 4443 232210 000 000000000122489999999999999998887789999999999999999999888 88888
Q ss_pred cCCC---CcceeeeeccCCCCcHHHHHHhhccc-CeEEcccc-cC--CCCCCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 381 SGGT---ENHLVLVNLRNKGIDGSRVEKVLESV-HIAANKNT-VP--GDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 381 ~~~~---~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~-~p--~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
.+.. .....++.+...+.+..++.+.|.+. ||.++... +. ........+.||+|++.++| ++|++++++
T Consensus 335 ~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt----~~di~~l~~ 410 (424)
T PLN02855 335 GPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNT----KEEVDAFIH 410 (424)
T ss_pred CCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCC----HHHHHHHHH
Confidence 6521 11223344444456778899999776 99997422 10 00000123679999999999 999999999
Q ss_pred HHHHHHHHH
Q 010058 454 FFDAAVKLA 462 (519)
Q Consensus 454 ~l~~~l~~~ 462 (519)
.|++++...
T Consensus 411 ~l~~~~~~~ 419 (424)
T PLN02855 411 ALKDTIAFF 419 (424)
T ss_pred HHHHHHHHH
Confidence 999988653
No 19
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=1.6e-29 Score=260.37 Aligned_cols=343 Identities=19% Similarity=0.259 Sum_probs=248.6
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHh
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTA 161 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~a 161 (519)
++..++++.|++++.+.+.+.+ ++|+..+..+ .....+.+.+++++++++|++++ +|.+++|++ ++..++.+
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~r~~la~~~g~~~~----~i~~t~~~t~a~~~al~~ 78 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEYF--GNPSSMHSFG-GEVGKAVEEAREQVAKLLGAEPD----EIIFTSGGTESDNTAIKS 78 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--CCCCcccHHH-HHHHHHHHHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 5666889999999999887644 6666422111 22234445778999999999874 488888777 77767776
Q ss_pred hc---CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-c
Q 010058 162 LL---KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-Y 236 (519)
Q Consensus 162 ll---~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~ 236 (519)
++ .+||+|++.+.+|++...++.... ..|..+..++. + +++.+|++++++.+++ ++++++++ ++| +
T Consensus 79 ~~~~~~~~~~vv~~~~~~~s~~~~~~~~~-----~~G~~v~~v~~--~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~t 149 (379)
T TIGR03402 79 ALAAQPEKRHIITTAVEHPAVLSLCQHLE-----KQGYKVTYLPV--D-EEGRLDLEELRAAITD-DTALVSVMWANNET 149 (379)
T ss_pred HHHhcCCCCeEEEcccccHHHHHHHHHHH-----HcCCEEEEEcc--C-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCe
Confidence 53 567899988888877655443221 13555555553 3 3578999999999987 89998887 555 8
Q ss_pred cccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-ccCcch
Q 010058 237 ARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQGQEV 314 (519)
Q Consensus 237 g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~~g~~~ 314 (519)
|...|+++|.++|+++|+++++|++|..|..+.++... ++|++++|+|| +.||.| |+++++++....| ..|+..
T Consensus 150 G~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~---~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~~p~~~g~~~ 225 (379)
T TIGR03402 150 GTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEM---NIDMLSLSGHK-LHGPKGVGALYIRKGTRFRPLLRGGHQ 225 (379)
T ss_pred eecccHHHHHHHHHHcCCEEEEECcccccccccCcccC---CCCEEEEcHHH-cCCCCceEEEEECCCCCCCCcccCCcc
Confidence 99999999999999999999999999988777666554 79999999999 789998 9999987654444 333221
Q ss_pred hhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh-c-CCEEecCCCCcceeeee
Q 010058 315 MYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE-R-GYDLVSGGTENHLVLVN 392 (519)
Q Consensus 315 ~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~v~ 392 (519)
. .....|+++...+.++.++++++.. .+++..++..++++++.+.|.+ . ++.+..+.......++.
T Consensus 226 ~-----------~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 293 (379)
T TIGR03402 226 E-----------RGRRAGTENVPGIVGLGKAAELATE-HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVN 293 (379)
T ss_pred C-----------CCcCCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEE
Confidence 0 0112489999999999999988754 5677788999999999999986 5 77776542211111222
Q ss_pred ccCCCCcHHHHHHhhcccCeEEcccc-c-CCCCC------------CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 393 LRNKGIDGSRVEKVLESVHIAANKNT-V-PGDVS------------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 393 ~~~~~~~~~~~~~~L~~~gI~v~~~~-~-p~~~~------------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+...+.++.++...|.++||.++... + ++... ....+.||+|++.+|| ++|++++++.|+++
T Consensus 294 ~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t----~~di~~~~~~l~~~ 369 (379)
T TIGR03402 294 ISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNT----EEDIDYVLEVLPPI 369 (379)
T ss_pred EEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCC----HHHHHHHHHHHHHH
Confidence 22234578889999999999997421 1 11000 1124789999999999 99999999999998
Q ss_pred HHH
Q 010058 459 VKL 461 (519)
Q Consensus 459 l~~ 461 (519)
++.
T Consensus 370 ~~~ 372 (379)
T TIGR03402 370 IAR 372 (379)
T ss_pred HHH
Confidence 764
No 20
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=1.2e-29 Score=260.41 Aligned_cols=344 Identities=20% Similarity=0.234 Sum_probs=249.6
Q ss_pred cCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHH
Q 010058 82 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYT 160 (519)
Q Consensus 82 ~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~ 160 (519)
.++..++|+.|++++.+.+.+.+ ++|....+.......++-+.+++.+++++|++++. +|.+++|++ ++..++.
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~---~v~~~~~~t~a~~~~~~ 79 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFY--ANPHSGVSHRSREFAEILEEAREALAKLLGAPPDE---EVVFTSNGTEALNAVAS 79 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSG--SSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTE---EEEEESSHHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhh--hcCcccccchhhhhhHHHHHHHHHHHHhcCCcccc---ccccccccchhhhhhhh
Confidence 46777899999999999988765 44432222223445556678889999999998732 588888777 8888888
Q ss_pred hh---cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc-c
Q 010058 161 AL---LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS-A 235 (519)
Q Consensus 161 al---l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s-n 235 (519)
++ +++||+|++.+.+|++...++.... ...|..+..++. + .++.+|++++++.+.+ ++++|+++ .+ .
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~----~~~g~~v~~i~~--~-~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 80 SLLNPLKPGDEVLVTSNEHPSNRYPWEEIA----KRKGAEVRVIPA--D-PGGSLDLEDLEEALNP-DTRLVSISHVENS 151 (371)
T ss_dssp HHHHHGTTTCEEEEEESSHHHHHHHHHHHH----HHTTEEEEEEEE--G-TTSSCSHHHHHHHHHT-TESEEEEESBETT
T ss_pred cccccccccccccccccccccccccccccc----ccchhhhccccc--c-ccchhhhhhhhhhhcc-ccceEEeeccccc
Confidence 88 8999999999999888875554222 123555555553 3 3578999999999986 99999998 33 3
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--cccc-ccC
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEIN-KQG 311 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~~~~-~~g 311 (519)
+|...|+++|.++|+++|+++++|++|+.|.++.++... ++|++++|+|| |.||+| |+++++++. ++.| ..|
T Consensus 152 tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~---~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~p~~~~ 227 (371)
T PF00266_consen 152 TGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDEL---GADFLVFSSHK-LGGPPGLGFLYVRPEAIERLRPAKPG 227 (371)
T ss_dssp TTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTT---TESEEEEESTS-TTSSSTEEEEEEEHHHHHHHHTSSSS
T ss_pred ccEEeeeceehhhhhccCCceeEechhcccccccccccc---ccceeeecccc-cCCCCchhhheehhhhhhcccccccc
Confidence 899999999999999999999999999999998887776 89999999999 999999 999999964 3444 222
Q ss_pred cc-h-hhhHHHHh--hhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC-CEEecC-CCC
Q 010058 312 QE-V-MYAYEDKI--NQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG-YDLVSG-GTE 385 (519)
Q Consensus 312 ~~-~-~~~~~~~i--~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~ 385 (519)
+. . .... ... .........|+++...+.++..+++.+...+.+++.++..++.+++.+.|.+++ +.++.+ ...
T Consensus 228 ~~~~~~~~~-~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 306 (371)
T PF00266_consen 228 GGYLDFPSL-QEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEP 306 (371)
T ss_dssp SSTTTHHHH-HHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGG
T ss_pred ccccccccc-hhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccc
Confidence 22 1 1111 111 111122234899999999999999999777889999999999999999999994 555442 112
Q ss_pred cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCC-------CCCCeEEeccCccccCCCCHHHHHHH
Q 010058 386 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA-------MVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 386 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~-------~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
....++.+...+.++.++.+.|++.||.++. |.... ...++||+|++.++| ++|++++
T Consensus 307 ~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~----G~~~~~~~~~~~~~~~~iRvS~~~~nt----~~dv~~l 371 (371)
T PF00266_consen 307 RRPSIVSFNLPGSDADDVVKYLEERGIAVST----GSACAGPSLDILGMGGVIRVSLHYYNT----EEDVDRL 371 (371)
T ss_dssp BGTTEEEEEETTSSHHHHHHHHHHHTEEEEE----STTTCHHHHHHHHTTTEEEEE-GTTSS----HHHHHHH
T ss_pred cccceEEEeecCCCHHHHHHHHhhcCEEEec----cCcccHHHHHHhCCCCEEEEeccCCCC----HHHHhhC
Confidence 2222333333567889999999999999973 22211 013799999999999 9999975
No 21
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=1.9e-29 Score=259.49 Aligned_cols=351 Identities=19% Similarity=0.239 Sum_probs=245.9
Q ss_pred CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCC
Q 010058 87 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKP 165 (519)
Q Consensus 87 ~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~p 165 (519)
++|+.|++++.+.+.+.. +.++...|..........+.+++++++++|++... +|.+++|++ ++..++.+++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~~ 85 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREVEETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLKE 85 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccCC
Confidence 467899999988876521 12222122211112233445669999999986532 588887776 877788889999
Q ss_pred CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHH
Q 010058 166 HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYA 243 (519)
Q Consensus 166 GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~ 243 (519)
||+|++.+.+|+++..+.... ....|..++.++ .+ +++.+|++++++++++ +|++|+++ ++| +|...|++
T Consensus 86 gd~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~~ 157 (376)
T TIGR01977 86 GDHVITTPMEHNSVARPLECL----KEQIGVEITIVK--CD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPIE 157 (376)
T ss_pred CCEEEECcchhhHHHHHHHHH----HHHcCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCHH
Confidence 999999987777764432211 112244444444 44 3578999999999976 89999888 555 89999999
Q ss_pred HHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-ccCcchhh-hHHH
Q 010058 244 RIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQGQEVMY-AYED 320 (519)
Q Consensus 244 ~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~~g~~~~~-~~~~ 320 (519)
+|.++|+++|+++++|++|..|..+.++... ++|++++|+|||+.||.| |+++++++....+ ..|+...+ ....
T Consensus 158 ~i~~l~~~~~~~livD~a~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
T TIGR01977 158 EIGELAQENGIFFILDAAQTAGVIPIDMTEL---AIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSALID 234 (376)
T ss_pred HHHHHHHHcCCEEEEEhhhccCccCCCchhc---CCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcccccccc
Confidence 9999999999999999999999887766554 799999999999999988 7777776543334 22221100 0000
Q ss_pred HhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCC-CCcceeeeeccCCCC
Q 010058 321 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGG-TENHLVLVNLRNKGI 398 (519)
Q Consensus 321 ~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~v~~~~~~~ 398 (519)
...........|+++...++++..+++++.+.+.+...++..++++++.+.|.+. |+.++.+. +.....++.+...+.
T Consensus 235 ~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 314 (376)
T TIGR01977 235 QPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI 314 (376)
T ss_pred ccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC
Confidence 0000000112478899999999999999888888999999999999999999976 78877642 222233444444466
Q ss_pred cHHHHHHhhccc-CeEEcccccCCC-----CCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 399 DGSRVEKVLESV-HIAANKNTVPGD-----VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 399 ~~~~~~~~L~~~-gI~v~~~~~p~~-----~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
++.++.+.|.+. ||.++....-.. .+....+.||++++.++| ++|+++++++|++
T Consensus 315 ~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t----~~dv~~~~~~l~~ 375 (376)
T TIGR01977 315 DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNT----EEEIEKLLEALSE 375 (376)
T ss_pred CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCC----HHHHHHHHHHHhh
Confidence 788899999876 999974211000 012245789999999999 9999999999975
No 22
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=8.1e-29 Score=257.20 Aligned_cols=359 Identities=18% Similarity=0.189 Sum_probs=251.1
Q ss_pred Ceeec-CCCCCCcHHHHHHHhhHhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 78 GLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 78 ~i~L~-a~en~~~~~V~ea~~~~l~~~~~~g~p~~~-~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
.+.|. ++..++|+.|.+++.+.+...+ ++|... ++.+.. .....+.+++.+++++|+++. .+|.+++|++ +
T Consensus 19 ~~yld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~r~~ia~~~~~~~~---~~v~~~~g~t~~ 92 (403)
T TIGR01979 19 LVYLDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVR-ATEAYEAVREKVAKFINAASD---EEIVFTRGTTES 92 (403)
T ss_pred eEEEeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHH-HHHHHHHHHHHHHHHhCcCCC---CeEEEeCCHHHH
Confidence 35664 5566789999999998887654 444321 111112 223344667999999999832 2589999988 6
Q ss_pred HHHHHHhh----cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 155 NFQVYTAL----LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 155 ~~~~~~al----l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
+..++.++ ++|||+|++.+.+|.+....+.. .....|..++.++ .+ +++.+|++++++.+.+ +|++|+
T Consensus 93 l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~----~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~i~~-~~~lv~ 164 (403)
T TIGR01979 93 INLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQL----LAERTGATLKFIP--LD-DDGTLDLDDLEKLLTE-KTKLVA 164 (403)
T ss_pred HHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHH----HHHhcCcEEEEEe--cC-CCCCCCHHHHHHHhcc-CCeEEE
Confidence 66566664 68999999999888876543321 1123455555655 34 4578999999999987 899998
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--c
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--K 305 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~ 305 (519)
++ ++| +|...|+++|.++|+++|+++++|++|..|..+.++... ++|++++|+||++ ||.| |+++++++. .
T Consensus 165 ~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~ 240 (403)
T TIGR01979 165 ITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQAL---DCDFYVFSGHKMY-GPTGIGVLYGKEELLEQ 240 (403)
T ss_pred EEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCcccc---CCCEEEEeccccc-CCCCceEEEEchHHHhc
Confidence 88 555 899999999999999999999999999888766555433 6899999999965 7877 999988753 2
Q ss_pred cccc-cCcch-h-hhHHH-HhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEe
Q 010058 306 EINK-QGQEV-M-YAYED-KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLV 380 (519)
Q Consensus 306 ~~~~-~g~~~-~-~~~~~-~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 380 (519)
+.|. .|+.. . +.... ...........|+++...++++..+++++...+++.+.++..++++.+.+.|+++ |++++
T Consensus 241 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~ 320 (403)
T TIGR01979 241 MPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIY 320 (403)
T ss_pred CCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 3332 22211 0 00000 0000001112478999999999999998876678888999999999999999988 88887
Q ss_pred cCCC---CcceeeeeccCCCCcHHHHHHhhcccCeEEcccc-c--CCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 381 SGGT---ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNT-V--PGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 381 ~~~~---~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-~--p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
.+.. ..+++.+.+ .+.++.++.+.|++.||.++... + |.......++++|+|++.+++ ++|+++++++
T Consensus 321 ~~~~~~~~~~~v~~~~--~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t----~~di~~l~~~ 394 (403)
T TIGR01979 321 GPRDAEDRGGIISFNV--EGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNT----EEDIDALVEA 394 (403)
T ss_pred CCCCccccCceEEEEe--CCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCC----HHHHHHHHHH
Confidence 6532 133444443 34567788899999999997321 0 000001124689999999998 8999999999
Q ss_pred HHHHHH
Q 010058 455 FDAAVK 460 (519)
Q Consensus 455 l~~~l~ 460 (519)
|+++++
T Consensus 395 l~~~~~ 400 (403)
T TIGR01979 395 LKKVRK 400 (403)
T ss_pred HHHHHH
Confidence 998775
No 23
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=1e-28 Score=253.90 Aligned_cols=352 Identities=17% Similarity=0.166 Sum_probs=247.2
Q ss_pred cCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHH
Q 010058 82 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYT 160 (519)
Q Consensus 82 ~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~ 160 (519)
.++.+++|+.+.+++.+.+...+ ++|++..+...+........+++++++++|++.. .+|.+++|++ ++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---~~v~~~~g~t~a~~~~~~ 79 (373)
T cd06453 5 NAATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAYEAAREKVARFINAPSP---DEIIFTRNTTEAINLVAY 79 (373)
T ss_pred CccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCCHHHHHHHHHH
Confidence 35677889999999999886643 4554322222233444555677999999999732 2588888887 7777888
Q ss_pred hhcC---CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-
Q 010058 161 ALLK---PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA- 235 (519)
Q Consensus 161 all~---pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn- 235 (519)
++.. |||+|++++++|++........ ....|..++.+++ + +++.+|++++++.+.+ ++++|+++ ++|
T Consensus 80 ~l~~~~~~g~~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~v~~--~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~ 151 (373)
T cd06453 80 GLGRANKPGDEIVTSVMEHHSNIVPWQQL----AERTGAKLKVVPV--D-DDGQLDLEALEKLLTE-RTKLVAVTHVSNV 151 (373)
T ss_pred HhhhcCCCCCEEEECcchhHHHHHHHHHH----HhhcCcEEEEeec--C-CCCCcCHHHHHHHhcC-CceEEEEeCcccc
Confidence 8876 9999999998887764333211 1234555666654 3 4578999999999987 89999988 555
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeeccc--cccc-ccCc
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGV--KEIN-KQGQ 312 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~--~~~~-~~g~ 312 (519)
+|...|+++|.++|+++|++|++|++|..|....+.... ++|++++|+||++++++.|+++++++. .+.+ ..|+
T Consensus 152 tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~ 228 (373)
T cd06453 152 LGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDL---GCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGG 228 (373)
T ss_pred cCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeecccc---CCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCC
Confidence 789999999999999999999999999887765443333 689999999999988666999998753 2333 2222
Q ss_pred chhhh--H-HHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCC-CCcc
Q 010058 313 EVMYA--Y-EDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGG-TENH 387 (519)
Q Consensus 313 ~~~~~--~-~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~ 387 (519)
..... . .............++++...+.++..+++.+...++++..++..++++++.+.|.++ |++++.+. ....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 308 (373)
T cd06453 229 EMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAG 308 (373)
T ss_pred CccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCC
Confidence 11000 0 000000001112368888889999999998887788889999999999999999998 78887432 2233
Q ss_pred eeeeeccCCCCcHHHHHHhhcccCeEEcccccCCC---CCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 388 LVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD---VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 388 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~---~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
++.+.+ .+.+..++.+.|.++||.+........ .....++.||++++.++| ++|+++++++|
T Consensus 309 ~~~~~~--~~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t----~~di~~~~~~l 373 (373)
T cd06453 309 VVSFNL--EGIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNT----EEEIDALVEAL 373 (373)
T ss_pred eEEEEE--CCcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCC----HHHHHHHHhhC
Confidence 444443 345778888999889999863210000 001125689999999999 99999999864
No 24
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=8.4e-29 Score=256.62 Aligned_cols=339 Identities=18% Similarity=0.193 Sum_probs=238.9
Q ss_pred eee-cCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHH
Q 010058 79 LEL-IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANF 156 (519)
Q Consensus 79 i~L-~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~ 156 (519)
+.| .++..++|+.+++++.+.+.... ..++.. |.......++.+.+++.+++++|++++ +|.+++|++ ++.
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~l~~~ia~~~~~~~~----~v~~~~~~t~~l~ 91 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSN--ANRGGA-YESSRRADQVVDDAREAVADLLNADPP----EVVFGANATSLTF 91 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcC--CCCCCC-chHHHHHHHHHHHHHHHHHHHcCCCCC----eEEEeCCHHHHHH
Confidence 555 36677889999999999886532 222221 222233445556777999999999764 488888887 555
Q ss_pred HHHHhh---cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 157 QVYTAL---LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 157 ~~~~al---l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
.++.++ ++|||+|++.+++|.++...+.. .....|..+..++ ++++++.+|++++++.+.+ ++++|+++
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~----~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~i~~-~~~lv~i~~ 164 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQ----AAERAGAKVKWAR--VDEATGELHPDDLASLLSP-RTRLVAVTA 164 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHH----HHHhcCCEEEEEe--ccccCCCcCHHHHHHhcCC-CceEEEEeC
Confidence 455554 78999999999888776543311 1223455555554 4444578999999999986 89999988
Q ss_pred ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccC
Q 010058 233 ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311 (519)
Q Consensus 233 ~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g 311 (519)
++| +|...|+++|.++|+++|+++++|++|+.|....++... ++|++++|+||++ ||+.|+++++++.
T Consensus 165 ~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~---~~d~~~~s~~K~~-g~~~G~l~~~~~~------- 233 (397)
T TIGR01976 165 ASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQAT---GADFLTCSAYKFF-GPHMGILWGRPEL------- 233 (397)
T ss_pred CCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHc---CCCEEEEechhhc-CCceEEEEEcHHH-------
Confidence 666 899999999999999999999999999877554444333 6899999999987 7889999998742
Q ss_pred cchhhhHHHHhhhcc---------cCCCCCCccHHHHHHHHHHHHHhcCHh--------------HHHHHHHHHHHHHHH
Q 010058 312 QEVMYAYEDKINQAV---------FPGLQGGPHNHTISGLAVALKQVKTPE--------------YKAYQEQVLSNSSKF 368 (519)
Q Consensus 312 ~~~~~~~~~~i~~~~---------~~~~~g~~~~~~iaal~~al~~~~~~~--------------~~~~~~~~~~~~~~l 368 (519)
.+.+.... .....|+++...++++..|++.+...+ +++..++..+.++++
T Consensus 234 -------~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 306 (397)
T TIGR01976 234 -------LMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYL 306 (397)
T ss_pred -------HhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 22211100 011237899999999999988775433 566777888899999
Q ss_pred HHHHHhcC-CEEecC--C-CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCC------CCCCCCCeEEeccCcc
Q 010058 369 ARSLLERG-YDLVSG--G-TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD------VSAMVPGGIRMGTPAL 438 (519)
Q Consensus 369 ~~~L~~~g-~~~~~~--~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~------~~~~~~~~iRi~~~~~ 438 (519)
.+.|++++ ++++.+ + ...+++.+. ..+.+..++.+.|.+.||.++.+..... .-+...+.||+|++.+
T Consensus 307 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 384 (397)
T TIGR01976 307 LVGLSDLPGVTLYGVARLAARVPTVSFT--VHGLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHY 384 (397)
T ss_pred HHHHhcCCCEEEeCCCCccCCCceEEEE--eCCcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeecc
Confidence 99999884 888764 1 123333333 3345677899999999999974311100 0012346899999999
Q ss_pred ccCCCCHHHHHHHHHHH
Q 010058 439 TSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 439 ttrg~~~~di~~l~~~l 455 (519)
+| ++|++++++.|
T Consensus 385 ~t----~~di~~l~~~l 397 (397)
T TIGR01976 385 NT----AEEVDRLLEAL 397 (397)
T ss_pred CC----HHHHHHHHHhC
Confidence 99 99999998864
No 25
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=3.5e-28 Score=251.52 Aligned_cols=349 Identities=14% Similarity=0.123 Sum_probs=248.6
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQV 158 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~ 158 (519)
+.++++...+++.|++++...+.+ + . .....++.+.+++++++++|++.++ +.++.++|+.++.++
T Consensus 11 ~l~~pGP~~~~~~V~~a~~~~~~~-~----------~-~~~~~~~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~a 76 (401)
T PLN02409 11 HLFVPGPVNIPERVLRAMNRPNED-H----------R-SPAFPALTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWESA 76 (401)
T ss_pred eeccCCCCCCCHHHHHHhcCCCCC-C----------C-CHHHHHHHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHHHH
Confidence 567888888999999999765432 1 1 1344567778889999999997643 334444444488888
Q ss_pred HHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh---hCCcEEEEc-cc
Q 010058 159 YTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL---FRPKLIVAG-AS 234 (519)
Q Consensus 159 ~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~---~k~klIi~~-~s 234 (519)
+..+++|||+|++++..+.+.. +.. .....|..++.++. +. +..+|++++++++++ .++++|+++ ++
T Consensus 77 ~~~~~~~Gd~Vlv~~~~~~~~~--~~~----~~~~~g~~v~~v~~--~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~ 147 (401)
T PLN02409 77 LTNTLSPGDKVVSFRIGQFSLL--WID----QMQRLNFDVDVVES--PW-GQGADLDILKSKLRQDTNHKIKAVCVVHNE 147 (401)
T ss_pred HHhcCCCCCEEEEeCCCchhHH--HHH----HHHHcCCceEEEEC--CC-CCCCCHHHHHHHHhhCcCCCccEEEEEeec
Confidence 8889999999999986554332 111 12233555556553 32 245899999999986 378999988 44
Q ss_pred c-ccccccHHHHHHH--HhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--ccc
Q 010058 235 A-YARLYDYARIRKV--CDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EIN 308 (519)
Q Consensus 235 n-~g~~~d~~~i~~i--a~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~ 308 (519)
| +|...|+++|.++ |+++|+++++|++|+.|..+.++... ++|++++|+||||.||.| |+++++++.. +.+
T Consensus 148 ~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~---~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~ 224 (401)
T PLN02409 148 TSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW---GVDVALTGSQKALSLPTGLGIVCASPKALEASKT 224 (401)
T ss_pred ccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc---CccEEEEcCccccCcCCCcceeEECHHHHHHHhc
Confidence 4 8999999999999 99999999999999888777666555 789999999999999887 9999887531 111
Q ss_pred ccCcchhhhHHHHhhhcccC-CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcc
Q 010058 309 KQGQEVMYAYEDKINQAVFP-GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENH 387 (519)
Q Consensus 309 ~~g~~~~~~~~~~i~~~~~~-~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 387 (519)
.......+++....+..... ...++|+.+.+.++..|++.+.+.++++..++..++++++.+.|.+.|++++.+....+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~ 304 (401)
T PLN02409 225 AKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWR 304 (401)
T ss_pred CCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhc
Confidence 11000111111111000000 11358899999999999999888889999999999999999999999999887422222
Q ss_pred e-eeeec-cCCCCcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 388 L-VLVNL-RNKGIDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 388 ~-~~v~~-~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
. .++.+ .+.++++.++.+.| ++.||.+. +|. ++.....+|||.+.+++ ++|+..++.+|.+++...
T Consensus 305 s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~----~G~-~~~~~~~~Rig~~g~~~----~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 305 SDTVTAVVVPEGIDSAEIVKNAWKKYNLSLG----LGL-NKVAGKVFRIGHLGNVN----ELQLLGALAGVEMVLKDV 373 (401)
T ss_pred ccceEEEeCCCCCCHHHHHHHHHHhCCEEEE----cCC-CcccCCEEEEcCCCCCC----HHHHHHHHHHHHHHHHHc
Confidence 2 12222 23467777777655 67899996 232 33346789999999998 899999999999998754
No 26
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.97 E-value=3.4e-28 Score=250.72 Aligned_cols=342 Identities=18% Similarity=0.273 Sum_probs=246.3
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCcHH-HHHHHHH
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL-DPAKWGVNVQSLSGSP-ANFQVYT 160 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~-~~~~~~~~V~~~sGs~-a~~~~~~ 160 (519)
++..++++.|++++...+.+.+ ++|+..+..+......+++ +++.+.+.+|+ +++ +|.+++|++ ++..++.
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~----~i~~t~g~teal~~~~~ 78 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIAE-ALDKLYKGINARDLD----DIIITSCATESNNWVLK 78 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHHHH
Confidence 4556788999999999988755 5565433222334455554 44566667777 453 699999988 7776777
Q ss_pred hhc-----CC-CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-c
Q 010058 161 ALL-----KP-HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-A 233 (519)
Q Consensus 161 all-----~p-GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~ 233 (519)
++. ++ ||+|+++..+|+++...... +...|..++.++ ++ +++.+|++++++++++ ++++++++ +
T Consensus 79 ~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~-----~~~~G~~v~~v~--~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 149 (382)
T TIGR03403 79 GVYFDEILKGGKNHIITTEVEHPAVRATCAF-----LESLGVEVTYLP--IN-EQGTITAEQVREAITE-KTALVSVMWA 149 (382)
T ss_pred HHHHhhcccCCCCEEEEcCCccHHHHHHHHH-----HHHCCCEEEEEe--cC-CCCCCCHHHHHHhccc-CCeEEEEEcc
Confidence 652 56 47899998888877654331 122355555555 44 3578999999999987 89998888 6
Q ss_pred cc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-cc
Q 010058 234 SA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQ 310 (519)
Q Consensus 234 sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~~ 310 (519)
+| +|...|+++|.++|+++|+++++|++|..|..+.++... ++|++++|+||+ .||.| |+++++++..+.| ..
T Consensus 150 ~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~~p~~~ 225 (382)
T TIGR03403 150 NNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKA---GVDFLSFSAHKF-HGPKGVGGLYIRKGVELTPLFH 225 (382)
T ss_pred cCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCcccc---CCCEEEEcchhh-CCCCceEEEEECCCCCCCCccc
Confidence 66 899999999999999999999999999988776555544 799999999996 67887 9999888654444 33
Q ss_pred CcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCC--cc
Q 010058 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTE--NH 387 (519)
Q Consensus 311 g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~--~~ 387 (519)
|+... .....|+++...+.++..+++...+ ..+...+++.++++++.+.|.++ |+.++.+... .+
T Consensus 226 g~~~~-----------~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~ 293 (382)
T TIGR03403 226 GGEHM-----------GGRRSGTLNVPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPN 293 (382)
T ss_pred CCCCC-----------CCcccCCcChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCC
Confidence 32210 0112478999999999999987654 46777889999999999999887 7888765321 22
Q ss_pred eeeeeccCCCCcHHHHHHhhcccCeEEcccc-cC-CCCC------------CCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 388 LVLVNLRNKGIDGSRVEKVLESVHIAANKNT-VP-GDVS------------AMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 388 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-~p-~~~~------------~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
++.+. ..++++.++...|.+.||.++... |. +... +...+.||+|++.++| ++|++++++
T Consensus 294 ~~~~~--~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t----~~did~~~~ 367 (382)
T TIGR03403 294 TILIS--IKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTT----EEEIDYTIE 367 (382)
T ss_pred EEEEE--eCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCC----HHHHHHHHH
Confidence 33443 346678888888999999998521 11 1000 1123679999999999 999999999
Q ss_pred HHHHHHHHH
Q 010058 454 FFDAAVKLA 462 (519)
Q Consensus 454 ~l~~~l~~~ 462 (519)
.|+++++..
T Consensus 368 ~l~~~~~~~ 376 (382)
T TIGR03403 368 VFKKAVQRL 376 (382)
T ss_pred HHHHHHHHH
Confidence 999988653
No 27
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=2.3e-28 Score=251.89 Aligned_cols=342 Identities=15% Similarity=0.182 Sum_probs=245.5
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHh
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTA 161 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~a 161 (519)
++..++|+.|++++.+.+...+ ++|+..+..+ .....+.+.+++.+++++|++++ +|.+++|++ ++..++.+
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIG-GTASSLLQVCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHH-HHHHHHHHHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 5666889999999998887544 4555433333 23344556788999999999874 599999977 87777777
Q ss_pred hc----CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-
Q 010058 162 LL----KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA- 235 (519)
Q Consensus 162 ll----~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn- 235 (519)
++ ++||.|++.+.+|+++...... ....|..+..++ ++ +++.+|++++++.+.+ ++++|+++ ++|
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~~~-----~~~~g~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYFQS-----LESQGYTVTEIP--VD-KSGLIRLVDLERAITP-DTVLASIQHANSE 150 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHHHH-----HHhCCCEEEEEe--eC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence 75 6799999988888776543321 222355555555 34 3578999999999876 88999888 555
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-ccCcc
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQGQE 313 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~~g~~ 313 (519)
+|...|+++|.++|+++|+++++|++|..|....++... ++|++++|+||+ .||.| |+++++++....+ ..++.
T Consensus 151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~---~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~~~~~~~~~ 226 (381)
T PRK02948 151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEM---GIDSLSVSAHKI-YGPKGVGAVYINPQVRWKPVFPGTT 226 (381)
T ss_pred cEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccC---CCCEEEecHHhc-CCCCcEEEEEEcCCCCCCCcccCCC
Confidence 899999999999999999999999999888765555444 689999999996 57887 9998887532111 00000
Q ss_pred hhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCc-ce-eee
Q 010058 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTEN-HL-VLV 391 (519)
Q Consensus 314 ~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~-~~v 391 (519)
.......++++...++++.++++...+ +.++.++++.++++++.+.|+++|+++...+..+ .+ .++
T Consensus 227 -----------~~~~~~~~t~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~ 294 (381)
T PRK02948 227 -----------HEKGFRPGTVNVPGIAAFLTAAENILK-NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHII 294 (381)
T ss_pred -----------CCCCcCCCCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEE
Confidence 001113478899999999999987643 5688889999999999999999987665432112 12 233
Q ss_pred eccCCCCcHHHHHHhhcccCeEEccccc-------CCC-------CCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 392 NLRNKGIDGSRVEKVLESVHIAANKNTV-------PGD-------VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 392 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~-------p~~-------~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
.+...++++.++...|.++||.++.+.- |.. ..+...+.||+|++.++| ++|++++++.|.+
T Consensus 295 ~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t----~~di~~l~~~l~~ 370 (381)
T PRK02948 295 GVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTT----KDQIDTTIHALET 370 (381)
T ss_pred EEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCC----HHHHHHHHHHHHH
Confidence 3333456677788888889999984321 100 001124689999999999 9999999999998
Q ss_pred HHH
Q 010058 458 AVK 460 (519)
Q Consensus 458 ~l~ 460 (519)
+++
T Consensus 371 ~~~ 373 (381)
T PRK02948 371 IGN 373 (381)
T ss_pred HHH
Confidence 875
No 28
>PLN02651 cysteine desulfurase
Probab=99.97 E-value=1.3e-28 Score=251.92 Aligned_cols=330 Identities=17% Similarity=0.232 Sum_probs=237.4
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHh
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTA 161 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~a 161 (519)
++..++|+.|++++.+.+.+.+ ++|+...+.......++.+.+++.+++++|++++ +|.+++|++ ++..++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVEKARAQVAALIGADPK----EIIFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 5566889999999999886644 5554311111122344455678999999999874 488888876 65555544
Q ss_pred h----cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-
Q 010058 162 L----LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA- 235 (519)
Q Consensus 162 l----l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn- 235 (519)
+ .++||+|++.+.+|++....+.. ....|..++.++. + +++.+|++++++++++ ++++++++ .+|
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~~~-----~~~~g~~v~~v~~--~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~ 150 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSCRH-----LQQEGFEVTYLPV--K-SDGLVDLDELAAAIRP-DTALVSVMAVNNE 150 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHHHH-----HHhcCCEEEEEcc--C-CCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence 3 57899999999888776544331 1123444555543 3 4578999999999987 89999887 555
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--cccc-ccC
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEIN-KQG 311 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~~~~-~~g 311 (519)
+|...|+++|.++|+++|+++++|++|..|.++.++... ++|++++|+||+ .||.| |+++++++. .+.| ..|
T Consensus 151 tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~---~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p~~~g 226 (364)
T PLN02651 151 IGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDL---GVDLMSISGHKI-YGPKGVGALYVRRRPRVRLEPLMSG 226 (364)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccC---CCCEEEechhhh-CCCCceEEEEEcCCCCCCCCccccC
Confidence 899999999999999999999999999999888777665 789999999997 78988 999998853 2333 333
Q ss_pred cchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh-c-CCEEecCC-CCcc-
Q 010058 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE-R-GYDLVSGG-TENH- 387 (519)
Q Consensus 312 ~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-~~~~- 387 (519)
+... .....||++...+.++.+|++++.. +.++..++..+.++++.+.|.+ . |++++.+. ...+
T Consensus 227 ~~~~-----------~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~ 294 (364)
T PLN02651 227 GGQE-----------RGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRY 294 (364)
T ss_pred CCcc-----------CCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCc
Confidence 2210 1123589999999999999998875 4588889999999999999986 3 88888752 2211
Q ss_pred eeeeeccCCCCcHHHHHHhhcccCeEEcccc-c-CCC-----C----C---CCCCCeEEeccCccccCCCCHHHHH
Q 010058 388 LVLVNLRNKGIDGSRVEKVLESVHIAANKNT-V-PGD-----V----S---AMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 388 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-~-p~~-----~----~---~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
..++.+...++++.++.+.|.+ |.++... | ++. . + ....+.+|+|++.+|| ++|++
T Consensus 295 ~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t----~~did 364 (364)
T PLN02651 295 PGTLNLSFAYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTT----EEEVD 364 (364)
T ss_pred CCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCC----HHHcC
Confidence 2244444457788899999976 8886421 1 110 0 0 0124789999999999 88874
No 29
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.96 E-value=1.3e-27 Score=230.78 Aligned_cols=320 Identities=20% Similarity=0.228 Sum_probs=236.9
Q ss_pred cCeeecCC-CC-CCcHHHHHHHhhHhhhc-cCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 77 KGLELIPS-EN-FTSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 77 ~~i~L~a~-en-~~~~~V~ea~~~~l~~~-~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
+.|.|-.. -. .++|.|++|+.+.+.+. | |||.. . +++-.+.++|.++.++.+... ..|.++.|.-
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhGvf--GY~~~----~----~~~~~ai~~w~~~r~~~~i~~--e~i~~~p~VV 93 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHGVF--GYPYG----S----DELYAAIAHWFKQRHQWEIKP--EWIVFVPGVV 93 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcCCC--CCCCC----C----HHHHHHHHHHHHHhcCCCCCc--ceEEEcCcch
Confidence 34555323 23 46999999999999885 5 77632 2 334456669999999986433 3488888886
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..+++++.+|||.|++..+.|..+. +.+...|+.....|+..+...+.+|+++|++.+.+.++|+.++|
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~--------~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLC 165 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPFY--------NAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILC 165 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHHH--------HHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEe
Confidence 888899999999999999885544333 35667788877777766655668899999999988778888888
Q ss_pred -ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC-------CCCeEEEEcCCCcc--cCCCcceE
Q 010058 233 -ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF-------EYADVVTTTTHKSL--RGPRGAMI 298 (519)
Q Consensus 233 -~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~-------~~~di~~~S~~K~l--~GprgG~i 298 (519)
|+| +|+.+. +.+|.+||.+||+.||+|+.|+- ++..+...-|+ ....+.++|.+|++ +|...+++
T Consensus 166 nPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaD-lv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~ 244 (388)
T COG1168 166 NPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHAD-LVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYI 244 (388)
T ss_pred CCCCCCCccccHHHHHHHHHHHHHcCCEEEeeccccc-ccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeE
Confidence 888 888776 66778899999999999999863 34333211121 12346777889975 67777777
Q ss_pred EeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--C
Q 010058 299 FFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--G 376 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g 376 (519)
+..++ ++..+..+......+++++..++.|..+|.++- .+..++..+.+..|++++.+.|.+. +
T Consensus 245 Ii~n~-------------~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~ 310 (388)
T COG1168 245 IISNR-------------ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPG 310 (388)
T ss_pred EecCH-------------HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 76664 443333332223345788999999888888875 4567999999999999999999998 8
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHh-hcccCeEEcccccCCCC-CCCCCCeEEeccC
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKV-LESVHIAANKNTVPGDV-SAMVPGGIRMGTP 436 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~ 436 (519)
+++..+ ..+++.|+|++..+++..++.+. |++++|.++ +|.. ++.+.+.+|+.+.
T Consensus 311 v~v~~p-~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~----~G~~FG~~g~gf~RlN~a 367 (388)
T COG1168 311 VKVTEP-QGTYLAWLDCRELGLDDSELAEFLLEEAKVALS----PGSTFGEEGSGFVRLNFA 367 (388)
T ss_pred cEEecC-CCceeeeeeccccCCChHHHHHHHHHhhcEecc----CCCccCcCCCceEEEecC
Confidence 888765 45689999999999987777665 567999998 6666 6667789998754
No 30
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.7e-27 Score=235.13 Aligned_cols=349 Identities=16% Similarity=0.146 Sum_probs=259.2
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQ 157 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~ 157 (519)
.+-|+|++..+++.|++||...+.++. ..++. .+-+.+.+.++..|+.+... +-++.+||+.++.+
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~-----------s~~F~-~~~~~~~~~L~~v~~t~~~~--~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHR-----------SPDFV-GIMKEVLEKLRKVFGTENGD--VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCC-----------CHHHH-HHHHHHHHHHHHHhcCCCCc--EEEEcCCcHHHHHH
Confidence 367899999999999999987655422 12333 34456679999999997422 44666777779999
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-CCcEEEEc--cc
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-RPKLIVAG--AS 234 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-k~klIi~~--~s 234 (519)
++.++++|||+|++... |.+...+ . ..+...|..++.+..+ .+..+|++++++++++. ..++|.+. .+
T Consensus 72 av~sl~~pgdkVLv~~n---G~FG~R~--~-~ia~~~g~~v~~~~~~---wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET 142 (383)
T COG0075 72 AVASLVEPGDKVLVVVN---GKFGERF--A-EIAERYGAEVVVLEVE---WGEAVDPEEVEEALDKDPDIKAVAVVHNET 142 (383)
T ss_pred HHHhccCCCCeEEEEeC---ChHHHHH--H-HHHHHhCCceEEEeCC---CCCCCCHHHHHHHHhcCCCccEEEEEeccC
Confidence 99999999999999873 2222221 1 1233445555555433 34689999999999852 35666665 56
Q ss_pred cccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--ccc-cc
Q 010058 235 AYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EIN-KQ 310 (519)
Q Consensus 235 n~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~-~~ 310 (519)
++|...|+++|+++|++||+++|||+..+.|.....+..+ ++|+++++++|+|.+|.| |++.++++.. ... ..
T Consensus 143 STGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~w---giDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~ 219 (383)
T COG0075 143 STGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEW---GIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKH 219 (383)
T ss_pred cccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhc---CccEEEecCchhccCCCccceeEECHHHHHHHhcCCC
Confidence 6899999999999999999999999998889998888888 899999999999999999 9999887531 111 11
Q ss_pred CcchhhhHHHHhhhccc-CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC-Ccce
Q 010058 311 GQEVMYAYEDKINQAVF-PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGT-ENHL 388 (519)
Q Consensus 311 g~~~~~~~~~~i~~~~~-~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~ 388 (519)
. ...+++....+...- .....||+.+.+.|+..||+.+..++++..++++++++++++++++++|++++.... .+..
T Consensus 220 ~-~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~t 298 (383)
T COG0075 220 P-SFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPT 298 (383)
T ss_pred C-ceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCc
Confidence 1 222333332221111 334479999999999999999999999999999999999999999999999987322 2223
Q ss_pred eeeeccCCCCcHHHHHH-hhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 389 VLVNLRNKGIDGSRVEK-VLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 389 ~~v~~~~~~~~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+.....|.+++..++.. .++++||.+. +..++..+..+|||.....+ ..|+...+.+|..++...
T Consensus 299 vta~~~P~g~~~~~~~~~~~~~~g~~i~-----gg~~~l~gkifRIGhMG~~~----~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 299 VTAIKVPEGVDDKKVRRALLKEYGVEIA-----GGQGPLKGKIFRIGHMGNVR----PEDVLAALAALEAALREL 364 (383)
T ss_pred eEEEECCCCCCcHHHHHHHHHhCCEEec-----ccccccCccEEEEecCccCC----HHHHHHHHHHHHHHHHHc
Confidence 33334566777655555 5566899984 44556667899999988666 899999999999999865
No 31
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.96 E-value=3e-27 Score=246.59 Aligned_cols=346 Identities=16% Similarity=0.163 Sum_probs=239.5
Q ss_pred hcccCeeecCCCC---CCcH----HHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceE
Q 010058 74 RQWKGLELIPSEN---FTSV----SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNV 146 (519)
Q Consensus 74 ~~~~~i~L~a~en---~~~~----~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V 146 (519)
...+.++|..++. +.++ ++.+++.+++... ...|++..++.+++ +.+++++|.+. |
T Consensus 34 ~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-------~~~Y~~~~g~~~Lr----eaia~~~~~~~------v 96 (460)
T PRK13238 34 AGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-------DEAYAGSRSYYRLE----DAVKDIFGYPY------T 96 (460)
T ss_pred cCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-------CcccCCCCCHHHHH----HHHHHHhCCCc------E
Confidence 3456788888776 3333 4677777776541 24567778888888 67778888754 5
Q ss_pred EeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeee-------CCCCCCCCHHHHH
Q 010058 147 QSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL-------DESTGYIDYEQLE 218 (519)
Q Consensus 147 ~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~-------d~~~~~iD~d~l~ 218 (519)
++++|++ |+..+++++++||| |+++++.+..+.. .+...|..+..++.+. ++.++.+|+++|+
T Consensus 97 v~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~--------~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le 167 (460)
T PRK13238 97 IPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRA--------HIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLE 167 (460)
T ss_pred EECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHH--------HHHHcCCEEEEEeccccccccccccccCCcCHHHHH
Confidence 6666555 88889999999999 8877643333322 2445566666665432 1123459999999
Q ss_pred HHhhh---hCCcEEEEc-ccc-cc-cccc---HHHHHHHHhhcCCEEEehhhhhhh-cccc-----CCCCCC--------
Q 010058 219 KSAAL---FRPKLIVAG-ASA-YA-RLYD---YARIRKVCDKQKAVMLADMAHISG-LVAA-----GVIPSP-------- 275 (519)
Q Consensus 219 ~~i~~---~k~klIi~~-~sn-~g-~~~d---~~~i~~ia~~~~~~livD~ah~~g-~~~~-----~~~~~p-------- 275 (519)
+.+++ .++++|+++ ++| +| ...+ +++|+++|++||++||+|+||+.+ ++.. +....+
T Consensus 168 ~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~ 247 (460)
T PRK13238 168 ALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREM 247 (460)
T ss_pred HHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhh
Confidence 99985 268999998 666 55 4544 679999999999999999998664 2111 111111
Q ss_pred CCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhhcccC--C--CCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFP--G--LQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~--~--~~g~~~~~~iaal~~al~~~~~ 351 (519)
..++|++++|++|.+.+|.||+|+++++ ++.++++...+. + .+++++...+.|+++++.+...
T Consensus 248 ~s~~D~~~~Sg~K~g~~~~GG~i~~~d~-------------~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~ 314 (460)
T PRK13238 248 FSYADGLTMSAKKDAMVNIGGLLCFRDE-------------DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMD 314 (460)
T ss_pred cccCcEEEEecccCCCCcceeEEEcChH-------------HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhC
Confidence 2368999999999999999999999864 677766655422 2 2366677778888888876544
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC-------CCcHHH-HHHhhcccCeEEcccc---cC
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK-------GIDGSR-VEKVLESVHIAANKNT---VP 420 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-------~~~~~~-~~~~L~~~gI~v~~~~---~p 420 (519)
. .+.++..+++++|.+.|.+.|++++.+ ...|++++++... +.++.. +..++.+.||.+.... .+
T Consensus 315 ~---~~~~~~~~~~~~l~~~L~~~G~~~~~p-~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~ 390 (460)
T PRK13238 315 E---DYLAYRIGQVEYLGEGLEEAGVPIQTP-AGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLG 390 (460)
T ss_pred h---HHHHHHHHHHHHHHHHHHHCCCCeEcc-CCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecc
Confidence 3 344455667899999999999999875 4568899987532 223343 4566678999985321 22
Q ss_pred CCCC-----CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 010058 421 GDVS-----AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKI 465 (519)
Q Consensus 421 ~~~~-----~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~ 465 (519)
.+.. ......+|++++ .|+.+.++++.+++.|.++.+....+
T Consensus 391 ~~~~~~~~~~~~~~~~Rla~~---rr~~~~~~~~~~~~~l~~~~~~~~~~ 437 (460)
T PRK13238 391 RDPKTGEQLPAPAELLRLAIP---RRVYTQSHMDYVAEALKAVKENRESI 437 (460)
T ss_pred cCCCCccccCCccceEEEecc---cccCCHHHHHHHHHHHHHHHHhHhhc
Confidence 2210 112578999987 67888999999999999988766554
No 32
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.96 E-value=1.6e-27 Score=247.00 Aligned_cols=345 Identities=18% Similarity=0.224 Sum_probs=242.0
Q ss_pred eeec-CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHH
Q 010058 79 LELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANF 156 (519)
Q Consensus 79 i~L~-a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~ 156 (519)
+.|. ++..++++.|++++...+...+ ++|+.+.+.......+..+.+++.+++++|++++ +|.+++|++ ++.
T Consensus 5 ~yld~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~ 78 (402)
T TIGR02006 5 IYLDYAATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEAEEAVENARNQVAELIGADSR----EIVFTSGATESNN 78 (402)
T ss_pred EEeeCCcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHH
Confidence 4443 4556889999999998886544 5555322111112234555677999999999875 588888887 777
Q ss_pred HHHHhh----cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 157 QVYTAL----LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 157 ~~~~al----l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
.++.++ .++||+|++.+.+|.+...++... ...|..+..+++ + +++.+|++++++.+++ ++++|+++
T Consensus 79 ~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-----~~~g~~v~~v~~--~-~~~~~d~~~l~~~l~~-~~~lv~v~ 149 (402)
T TIGR02006 79 LAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-----EREGFEVTYLPP--K-SNGLIDLEELKAAIRD-DTILVSIM 149 (402)
T ss_pred HHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHH-----HhcCCEEEEEcc--C-CCCcCCHHHHHHhcCC-CCEEEEEE
Confidence 666665 378999999998887765543211 122545555543 4 4578999999999986 78998888
Q ss_pred -ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--ccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEI 307 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~~~ 307 (519)
++| +|...|+++|.++|+++|+++++|++|+.|..+.++... ++|++++|+||+ .||.| |+++++++. ...
T Consensus 150 ~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~---~~D~~~~s~~K~-~gp~G~G~l~~~~~~~~~~~ 225 (402)
T TIGR02006 150 HVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNEL---KVDLMSISGHKI-YGPKGIGALYVRRKPRVRLE 225 (402)
T ss_pred CCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcccc---CCCEEEEehhhh-cCCCceEEEEEccCCCCCCC
Confidence 555 899999999999999999999999999998877666544 799999999995 57877 888888642 222
Q ss_pred c-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCC-
Q 010058 308 N-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGT- 384 (519)
Q Consensus 308 ~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~- 384 (519)
+ ..|+.. .+ ....|+++...++++..+++.+.. +++...++..++++++.+.|+++ ++.++.+..
T Consensus 226 ~~~~g~~~----~~-------~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~ 293 (402)
T TIGR02006 226 ALIHGGGH----ER-------GMRSGTLPTHQIVGMGEAFRIAKE-EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEH 293 (402)
T ss_pred ceecCCCc----cC-------CccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccc
Confidence 3 222211 00 112478999999999999998764 67888899999999999999887 676654321
Q ss_pred -CcceeeeeccCCCCcHHHHHHhhcccCeEEcccc-c-CCCCC------------CCCCCeEEeccCccccCCCCHHHHH
Q 010058 385 -ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNT-V-PGDVS------------AMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 385 -~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-~-p~~~~------------~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
..+...+.+. ++++..+...|. +|.++... + +.... ....+.||+|++.+|| ++|++
T Consensus 294 ~~p~~~~v~f~--~~~~~~~~~~l~--~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t----~edid 365 (402)
T TIGR02006 294 RVPGNLNVSFN--YVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTT----EEEID 365 (402)
T ss_pred cCCCeEEEEEe--CcCHHHHHHhcC--CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCC----HHHHH
Confidence 1122234443 345666666664 66655321 1 11110 0124789999999999 99999
Q ss_pred HHHHHHHHHHHHH
Q 010058 450 KVAEFFDAAVKLA 462 (519)
Q Consensus 450 ~l~~~l~~~l~~~ 462 (519)
++++.|.++++..
T Consensus 366 ~l~~~l~~~~~~~ 378 (402)
T TIGR02006 366 YAVKLVKSAIDKL 378 (402)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988654
No 33
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=9.3e-27 Score=238.34 Aligned_cols=343 Identities=13% Similarity=0.095 Sum_probs=233.2
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANF 156 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~ 156 (519)
.+-|+|++..+++.|++++.....+ + +.++.+ +-+.+++.+++++|++++. .+|.+++|++ ++.
T Consensus 4 ~~l~~pgp~~~~~~v~~~~~~~~~~-----------~-~~~~~~-~~~~~r~~la~l~~~~~~~--~~i~~t~~~t~al~ 68 (363)
T TIGR02326 4 YLLLTPGPLTTSRTVKEAMLFDWCT-----------W-DSDYNI-VVEQIRQQLLALATAEEGY--TSVLLQGSGTFAVE 68 (363)
T ss_pred eeEecCCCCCCCHHHHHHhCCCCCC-----------C-ChHHHH-HHHHHHHHHHHHhCCCCCc--eEEEEcCCCHHHHH
Confidence 4568888888999999987653311 1 123333 4456789999999997532 2477776665 888
Q ss_pred HHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-CCcEEEEc-cc
Q 010058 157 QVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-RPKLIVAG-AS 234 (519)
Q Consensus 157 ~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-k~klIi~~-~s 234 (519)
.++.+++.+||.+++......+.. ... .....|..++.+++ + +++.+|++++++++++. +++++.+. .+
T Consensus 69 ~~~~~l~~~~~~vlv~~~~~~~~~--~~~----~a~~~g~~~~~v~~--~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 139 (363)
T TIGR02326 69 AVIGSAVPKDGKLLVVINGAYGAR--IVQ----IAEYLGIPHHVVDT--G-EVEPPDVVEVEAILAADPAITHIALVHCE 139 (363)
T ss_pred HHHHhcCCCCCeEEEEeCChhhHH--HHH----HHHHcCCceEEEeC--C-CCCCCCHHHHHHHHhhCCCccEEEEEeec
Confidence 899999999998777553221110 000 11223555555554 3 35789999999998752 35666555 34
Q ss_pred c-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--ccc-c
Q 010058 235 A-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EIN-K 309 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~-~ 309 (519)
+ +|...|+++|.++|+++|+++++|++|..|..+.++... ++|++++|+||+|.||.| |+++++++.. ..+ .
T Consensus 140 ~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~ 216 (363)
T TIGR02326 140 TTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAEL---HIDYLISSANKCIQGVPGFGFVIARQAELAACKGNA 216 (363)
T ss_pred CCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhc---CccEEEecCccccccCCcceEEEECHHHHHHhhcCC
Confidence 4 899999999999999999999999999888776655544 689999999999999888 9999987521 111 0
Q ss_pred cCcchhhhHHHHhhhc-ccCC-CCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcCCEEecCC-CC
Q 010058 310 QGQEVMYAYEDKINQA-VFPG-LQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERGYDLVSGG-TE 385 (519)
Q Consensus 310 ~g~~~~~~~~~~i~~~-~~~~-~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~ 385 (519)
.+ ...++....... ..++ ...+++.+.+.++..+++.+... ++++..+++.++++++.+.|+++|+.++.+. ..
T Consensus 217 ~~--~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 294 (363)
T TIGR02326 217 RS--LSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQ 294 (363)
T ss_pred Cc--eeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccC
Confidence 00 000111000000 0111 12356788888888899876554 4788889999999999999999998887542 12
Q ss_pred cc-eeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 386 NH-LVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 386 ~~-~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.. ..++.+... .++...+.+.|.++||.++ ||.. ....+||+|++.+++ .+|++++++.|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~----~g~~--~~~~~iRi~~~~~~~----~edv~~~l~~l~~~l 360 (363)
T TIGR02326 295 SPIITSFYSPEDPDYRFADFYQRLKEQGFVIY----PGKV--SQVDCFRIGNIGEVD----AADITRLLTAIGKAM 360 (363)
T ss_pred CceEEEEECCCCCCCCHHHHHHHHHHCCEEEE----CCcC--CCCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 22 223333221 2566778888988999997 4432 124689999877777 899999999998876
No 34
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.96 E-value=1.3e-26 Score=240.54 Aligned_cols=353 Identities=13% Similarity=0.113 Sum_probs=234.3
Q ss_pred cCeeec-CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 77 KGLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 77 ~~i~L~-a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
+.+.|. ++..++|+.|.+++...+.. +..+....++.+..... .+.+.. +.+ +++|++++ +|.+++|++ +
T Consensus 27 ~~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~l~g~~~~----~v~~~~~~t~~ 98 (406)
T TIGR01814 27 AVIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGHNTGKAPWF-TLDESL-LKL-RLVGAKED----EVVVMNTLTIN 98 (406)
T ss_pred CcEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccCccCCCChh-hhhhhh-ccc-cccCCCCC----cEEEeCCchHH
Confidence 457887 66667899999999887754 32111112221111111 222222 334 89999875 488888887 6
Q ss_pred HHHHHHhhcCCCC---EEEEecCCCcccccccccccCCceeeeeeeeE--EEeeeeCCCCCCCCHHHHHHHhhh--hCCc
Q 010058 155 NFQVYTALLKPHE---RIMALDLPHGGHLSHGYQTDTKKISAVSIFFE--TMPYRLDESTGYIDYEQLEKSAAL--FRPK 227 (519)
Q Consensus 155 ~~~~~~all~pGD---~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~v~~~~d~~~~~iD~d~l~~~i~~--~k~k 227 (519)
+..++.++++||+ .|++.+.+|++...++... ....|..++ .+.++.+ +++.+|++++++.+.. .+|+
T Consensus 99 l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~----~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~ 173 (406)
T TIGR01814 99 LHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQ----LQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIA 173 (406)
T ss_pred HHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHH----HHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeE
Confidence 6667788877753 5776667777654433210 111233331 1222222 3467899999988752 3789
Q ss_pred EEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeecc-c
Q 010058 228 LIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG-V 304 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~-~ 304 (519)
+|+++ .++ +|...|+++|.++|+++|+++++|++|+.|.++.++... ++|++++|+||||.||.||.+++.++ .
T Consensus 174 lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~---gvD~~~~s~hK~l~g~pG~~l~v~~~~~ 250 (406)
T TIGR01814 174 VILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDW---GVDFACWCTYKYLNAGPGAGAFVHEKHA 250 (406)
T ss_pred EEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccC---CCCEEEEcCccccCCCCCeEEEEehhhh
Confidence 99888 444 799999999999999999999999999999998877666 79999999999997666766665443 2
Q ss_pred -cccc-ccC---cchhhhHH--HHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--
Q 010058 305 -KEIN-KQG---QEVMYAYE--DKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-- 375 (519)
Q Consensus 305 -~~~~-~~g---~~~~~~~~--~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 375 (519)
...| ..| ....+.+. ............|+|+...++++.+|++.+...+.++..++...+++++.+.|.+.
T Consensus 251 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~ 330 (406)
T TIGR01814 251 HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCG 330 (406)
T ss_pred hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 2333 222 11100000 00000000112489999999999999999877788999999999999999999875
Q ss_pred ---CCEEecCCC-CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc-CccccCCCCHHHHHH
Q 010058 376 ---GYDLVSGGT-ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFEK 450 (519)
Q Consensus 376 ---g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~-~~~ttrg~~~~di~~ 450 (519)
|++++.+.. .....++.+... .++.++.+.|.++||.+.. ..++.||+|+ +.+|| ++|+++
T Consensus 331 ~~~~~~i~~~~~~~~r~~~v~~~~~-~~~~~~~~~L~~~gi~v~~---------~~~~~iRiS~~~~~nt----~~did~ 396 (406)
T TIGR01814 331 GPPVLTIITPRDHAQRGCQLSLTHP-VPGKAVFQALIKRGVIGDK---------REPSVIRVAPVPLYNT----FVDVYD 396 (406)
T ss_pred CCCceEEeCCCChhhcCCeEEEEec-CCHHHHHHHHHHCCEEEec---------cCCCeEEEechhccCC----HHHHHH
Confidence 377776522 111122333322 4677888889889998741 1235899998 68999 999999
Q ss_pred HHHHHHHHH
Q 010058 451 VAEFFDAAV 459 (519)
Q Consensus 451 l~~~l~~~l 459 (519)
+++.|++++
T Consensus 397 l~~~l~~~~ 405 (406)
T TIGR01814 397 AVNVLEEIL 405 (406)
T ss_pred HHHHHHHHh
Confidence 999998764
No 35
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=6.9e-26 Score=233.55 Aligned_cols=337 Identities=13% Similarity=0.094 Sum_probs=232.1
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ--LDPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g--~~~~~~~~~V~~~sG 151 (519)
.+.++|..+++. +++.+.+++.+.+.+.. ..|+...+..++++.+.+++.+.+| ++++ +|.+++|
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~----~i~~t~g 92 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGE-------TFYTHNLGIPELREALARYVSRLHGVATPPE----RIAVTSS 92 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcc----eEEEeCC
Confidence 456899888874 47899999988776521 2244445667888888899988888 4553 6999999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
++ ++..++.++++|||+|++.++.|..+.. .+...|..+..+++..+.+++.+|++++++.+++ ++++|+
T Consensus 93 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~i~ 163 (382)
T PRK06108 93 GVQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGARVVCVPLDFGGGGWTLDLDRLLAAITP-RTRALF 163 (382)
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc-cceEEE
Confidence 88 8887888999999999999977765543 2233465555665433234567999999998876 899888
Q ss_pred Ec-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccc-cCCCCCC--C---CCCeEEEEcCCCcc--cCCCcce
Q 010058 231 AG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVA-AGVIPSP--F---EYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 231 ~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~-~~~~~~p--~---~~~di~~~S~~K~l--~GprgG~ 297 (519)
++ ++| +|...+ +++|.++|+++|+++|+|++|...... .+..+.. + ....+++.|++|++ +|.|.|+
T Consensus 164 l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 243 (382)
T PRK06108 164 INSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGW 243 (382)
T ss_pred EECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceee
Confidence 87 666 786664 678888999999999999997643322 1111110 1 12458889999975 5788899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G 376 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 376 (519)
+++++ ++.+.+.... .....+++.....+...++... ...+++.++++.++++.+.+.|++. |
T Consensus 244 ~~~~~--------------~~~~~~~~~~-~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 307 (382)
T PRK06108 244 LVAPP--------------ALGQVLEKLI-EYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPG 307 (382)
T ss_pred eeCCH--------------HHHHHHHHHH-HhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99987 4555444322 1111233344444444455432 2335788889999999999999887 7
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
+.+..+ ..+.+.|+.+.. ..+..++.+.| +++||.+. ||.. ++...+++|+++.. + ++++++.++.
T Consensus 308 ~~~~~p-~~g~~~~~~l~~-~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~~~~~Ris~~~--~----~~~l~~~l~~ 375 (382)
T PRK06108 308 VEVAKP-DGAMYAFFRIPG-VTDSLALAKRLVDEAGLGLA----PGTAFGPGGEGFLRWCFAR--D----PARLDEAVER 375 (382)
T ss_pred CcccCC-CeeEEEEEeCCC-CCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEecC--C----HHHHHHHHHH
Confidence 776654 234455666643 23566676655 67899996 5553 33346799999886 4 7899999998
Q ss_pred HHHHHH
Q 010058 455 FDAAVK 460 (519)
Q Consensus 455 l~~~l~ 460 (519)
|.++++
T Consensus 376 l~~~l~ 381 (382)
T PRK06108 376 LRRFLA 381 (382)
T ss_pred HHHHHh
Confidence 887663
No 36
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=3.1e-26 Score=237.08 Aligned_cols=334 Identities=18% Similarity=0.219 Sum_probs=231.0
Q ss_pred ccCeeecCCCC---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 76 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGN-EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~-~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
++.|++..++- ..+|.+++++.+.+.. +..+|++.++..|. +...++| +.+++++|.+. .+.+++|
T Consensus 38 ~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~~ 107 (393)
T TIGR01822 38 REVLNFCANNYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYASC 107 (393)
T ss_pred ceEEEeeCCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECch
Confidence 45577766642 2488999999998875 43478888877663 3345555 88889999864 3777777
Q ss_pred HHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CC
Q 010058 152 SPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-----RP 226 (519)
Q Consensus 152 s~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~ 226 (519)
+.|+.+++.++++|||+|++.++.|.++... +.+.+... +.+ ..+|++++++.+++. ++
T Consensus 108 ~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~--------~~~~~~~~--~~~------~~~d~~~l~~~i~~~~~~~~~~ 171 (393)
T TIGR01822 108 FDANGGLFETLLGAEDAIISDALNHASIIDG--------VRLCKAKR--YRY------ANNDMADLEAQLKEARAAGARH 171 (393)
T ss_pred HHHHHHHHHHhCCCCCEEEEeccccHHHHHH--------HHhcCCce--EEe------CCCCHHHHHHHHHhhhhcCCCc
Confidence 7788889999999999999999888776542 22222211 111 247899999988752 67
Q ss_pred cEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC---C-CCC-CCCeEEEEcCCCcccCCCcceEE
Q 010058 227 KLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI---P-SPF-EYADVVTTTTHKSLRGPRGAMIF 299 (519)
Q Consensus 227 klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~---~-~p~-~~~di~~~S~~K~l~GprgG~i~ 299 (519)
++|+++ ..| +|...|+++|+++|++||+++++|++|..|....... + ..+ ..+|++++|+||+++|+|+|+++
T Consensus 172 ~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~ 251 (393)
T TIGR01822 172 RLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTT 251 (393)
T ss_pred eEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEE
Confidence 788877 334 8999999999999999999999999997776532110 0 111 25799999999999999999999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCE
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYD 378 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 378 (519)
+++ ++.+.+.....+.. .++.+...+++...+++... +.++..+++.++++++.+.|.+.|+.
T Consensus 252 ~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~ 315 (393)
T TIGR01822 252 ARK--------------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAGFD 315 (393)
T ss_pred eCH--------------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 887 45554443222222 23445555556666776543 35677889999999999999988887
Q ss_pred EecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 379 LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+..+. ..++.+.+.. ..+..++.+.|.+.||.+.....|. .+.....+|++++..++ ++|++++++.|.++
T Consensus 316 ~~~~~--~~~~~i~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~~~~iRis~~~~~t----~edi~~~~~~l~~~ 386 (393)
T TIGR01822 316 IKPAD--HPIIPVMLYD-AVLAQRFARRLLEEGIYVTGFFYPV--VPKGQARIRVQISAAHT----EEQLDRAVEAFTRI 386 (393)
T ss_pred CCCCC--CCEEEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCC--CCCCCceEEEEECCCCC----HHHHHHHHHHHHHH
Confidence 65321 2233332221 1345678788877899986321121 12233579999998888 89999999999988
Q ss_pred HH
Q 010058 459 VK 460 (519)
Q Consensus 459 l~ 460 (519)
.+
T Consensus 387 ~~ 388 (393)
T TIGR01822 387 GR 388 (393)
T ss_pred HH
Confidence 65
No 37
>PLN00175 aminotransferase family protein; Provisional
Probab=99.95 E-value=1.4e-25 Score=233.00 Aligned_cols=358 Identities=15% Similarity=0.097 Sum_probs=245.0
Q ss_pred hhhhhhcCHHHHHHHHHHHHhcccCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~ 131 (519)
.+++..+.++.+..+.+.. .+.+.|+|..+.+ .+++.+.+++.+.+.+.. ..|+...+..++++.+.+++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~Lr~aia~~~ 104 (413)
T PLN00175 33 AKRLEKFKTTIFTQMSSLA-IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-------NQYARGFGVPELNSAIAERF 104 (413)
T ss_pred hHHhhcCCCCHHHHHHHHh-hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-------CCcCCCCCCHHHHHHHHHHH
Confidence 4556666776666665543 3346788887665 357888999888876421 23455566778888888899
Q ss_pred HHHcCCCCCCCcc-eEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCC
Q 010058 132 LDAFQLDPAKWGV-NVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDEST 209 (519)
Q Consensus 132 ~~~~g~~~~~~~~-~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~ 209 (519)
.+.+|.+.+. . +|.+|+|++ ++..++.++++|||+|+++++.|..+.. .+...|..+..++ +++++
T Consensus 105 ~~~~g~~~~~--~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~~~~ 172 (413)
T PLN00175 105 KKDTGLVVDP--EKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA--------TLSMAGAKIKTVT--LRPPD 172 (413)
T ss_pred HHHhCCCCCC--CCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEE--CCccc
Confidence 8888864321 2 599999998 8888888999999999999976655533 2334465555554 44445
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CC---CCC
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PF---EYA 279 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~---~~~ 279 (519)
+.+|+++|++.+.+ ++|+|+++ ++| +|...+ +++|.++|++||+++|+|+++..... .+...+ .+ ...
T Consensus 173 ~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~-~~~~~s~~~~~~~~~~ 250 (413)
T PLN00175 173 FAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAF-EGDHISMASLPGMYER 250 (413)
T ss_pred CCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCcccc-CCcccChhhCCCCcCc
Confidence 88999999999887 89999988 666 787765 67788899999999999999643222 111110 11 124
Q ss_pred eEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 280 DVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 280 di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
.+++.|++|.+ +|+|.||+++++ ++.+.+........ .+++.....+++.+++.. +..+++.
T Consensus 251 vi~i~SfSK~~~~~G~RiG~~v~~~--------------~l~~~l~~~~~~~~-~~~s~~~Q~a~~~~l~~~-~~~~~~~ 314 (413)
T PLN00175 251 TVTMNSLGKTFSLTGWKIGWAIAPP--------------HLTWGVRQAHSFLT-FATATPMQWAAVAALRAP-ESYYEEL 314 (413)
T ss_pred EEEEecchhhccCcchheeeeEeCH--------------HHHHHHHHHHhhcc-CCCCHHHHHHHHHHHhCC-HHHHHHH
Confidence 57889999976 688999999987 44444433221111 223333444445566432 2345888
Q ss_pred HHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCC-cHHHHHHhh-cccCeEEcccccCCCC-C---CCCCCeE
Q 010058 358 QEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGI-DGSRVEKVL-ESVHIAANKNTVPGDV-S---AMVPGGI 431 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~L-~~~gI~v~~~~~p~~~-~---~~~~~~i 431 (519)
++++.++++.+.+.|.+.|+.+..+ ..++++|+++.+.++ +..++.+.| ++.||.+. ||.. . ....++|
T Consensus 315 ~~~~~~~~~~l~~~L~~~g~~~~~p-~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~F~~~~~~~~~~i 389 (413)
T PLN00175 315 KRDYSAKKDILVEGLKEVGFKVYPS-SGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAI----PPSVFYLNPEDGKNLV 389 (413)
T ss_pred HHHHHHHHHHHHHHHHHCCCeecCC-CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEe----CchHhCCCCCCCCCEE
Confidence 8999999999999999998876554 345677777654344 455666655 67899996 6543 1 1235689
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
||++.. + ++++++.++.|.++++
T Consensus 390 Rls~~~--~----~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 390 RFAFCK--D----EETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEcC--C----HHHHHHHHHHHHHHHh
Confidence 999863 4 7899999999887764
No 38
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.95 E-value=7.8e-26 Score=231.98 Aligned_cols=345 Identities=13% Similarity=0.119 Sum_probs=232.5
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-CcHHHHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSL-SGSPANFQ 157 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~-sGs~a~~~ 157 (519)
.-++|+...+++.|++++...... + ..++.+ ..+.+++.+++++|++++. ..|.++ +|+.++..
T Consensus 7 ~~~~pgP~~~~~~~~~a~~~~~~~-~-----------~~~~~~-~~~~~~~~l~~l~~~~~~~--~~i~~~~~gt~~l~~ 71 (368)
T PRK13479 7 LLLTPGPLTTSRTVREAMLRDWGS-W-----------DDDFNA-LTASVRAKLVAIATGEEGY--TCVPLQGSGTFSVEA 71 (368)
T ss_pred eeecCCCCCCCHHHHHHhCCCCCC-C-----------ChHHHH-HHHHHHHHHHHHhCCCCCc--eEEEEcCCcHHHHHH
Confidence 347888888999999998764311 1 113333 4456779999999996532 246555 45558888
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-CCcEEEEc-ccc
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-RPKLIVAG-ASA 235 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-k~klIi~~-~sn 235 (519)
++.+++.+||+|++.+..+.+.. .. ......|..+..++. + +++.+|++++++.+++. ++++|+++ ++|
T Consensus 72 ~~~~l~~~~~~vlv~~~~~~~~~--~~----~~~~~~g~~~~~i~~--~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 142 (368)
T PRK13479 72 AIGSLVPRDGKVLVPDNGAYGAR--IA----QIAEYLGIAHVVLDT--G-EDEPPDAAEVEAALAADPRITHVALVHCET 142 (368)
T ss_pred HHHhccCCCCeEEEEeCCchHHH--HH----HHHHHcCCcEEEEEC--C-CCCCCCHHHHHHHHHhCCCCcEEEEEcccC
Confidence 99999999999998864332221 00 012234555566654 3 34679999999988752 45667766 544
Q ss_pred -ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--cccccC
Q 010058 236 -YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQG 311 (519)
Q Consensus 236 -~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~~g 311 (519)
+|...|+++|.++|+++|+++++|++|..|..+.++... ++|++++|+||++.||.| |+++++++.. +....
T Consensus 143 ~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~---~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~- 218 (368)
T PRK13479 143 TTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAEL---GIDALISSANKCIEGVPGFGFVIARRSELEACKGNS- 218 (368)
T ss_pred ccccccCHHHHHHHHHHcCCEEEEEcccccCCcccccccc---CceEEEecCccccccCCCceEEEECHHHHHHhhcCC-
Confidence 899999999999999999999999988777655444443 689999999999998888 9999987431 11100
Q ss_pred cchhhhHHHHhhhccc-CCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC-C-cc
Q 010058 312 QEVMYAYEDKINQAVF-PGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERGYDLVSGGT-E-NH 387 (519)
Q Consensus 312 ~~~~~~~~~~i~~~~~-~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~-~~ 387 (519)
.....++......... .....+++...++++.++++.+... ++++..+++.++++.+.+.|+++|+.++.+.. . +.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 298 (368)
T PRK13479 219 RSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPI 298 (368)
T ss_pred CCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCce
Confidence 0000011111100000 1111367888888999999877554 46888899999999999999999988765321 1 11
Q ss_pred eeeeecc-CCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 388 LVLVNLR-NKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 388 ~~~v~~~-~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
...+.+. ..+++..++.+.|.+.||.+. ++... ..+.+|+|+..+++ ++|++++++.|++++..
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~L~~~gi~v~----~g~~~--~~~~iRis~~~~~t----~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 299 IVTFHAPADPAYDFKEFYERLKEQGFVIY----PGKLT--QVDTFRIGCIGDVD----AADIRRLVAAIAEALYW 363 (368)
T ss_pred EEEEECCCCCCcCHHHHHHHHHHCCEEEe----cCCCC--CCCEEEEecCCCCC----HHHHHHHHHHHHHHHHH
Confidence 1222221 123567788889988999996 33221 24579999877777 89999999999998864
No 39
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=4.3e-26 Score=236.67 Aligned_cols=347 Identities=17% Similarity=0.214 Sum_probs=234.8
Q ss_pred eeec-CCCCCCcHHHHHHHhhHhh--hccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 79 LELI-PSENFTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 79 i~L~-a~en~~~~~V~ea~~~~l~--~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
+-|. ++..++++.|++++.+.+. +.+ ++++.+.+..........+.+++++++++|++++ +|.+++|++ +
T Consensus 5 iyld~a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~----~v~~~~g~t~a 78 (404)
T PRK14012 5 IYLDYSATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLIGADPR----EIVFTSGATES 78 (404)
T ss_pred EEecCcCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC----eEEEeCCHHHH
Confidence 4443 5566889999999998886 444 4444321111111123344566899999999875 477787776 7
Q ss_pred HHHHHHhh----cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 155 NFQVYTAL----LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 155 ~~~~~~al----l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
+..++.++ +++||+|++.+.+|++...++... ...|..+..++ .+ +++.+|+++|++++++ ++++|+
T Consensus 79 l~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-----~~~g~~~~~v~--~~-~~g~~d~~~l~~~i~~-~t~lv~ 149 (404)
T PRK14012 79 DNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-----EREGFEVTYLD--PQ-SNGIIDLEKLEAAMRD-DTILVS 149 (404)
T ss_pred HHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-----HhCCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CCEEEE
Confidence 66666665 489999999998887765544311 12254455554 44 4578999999999987 899998
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--c
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--K 305 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~ 305 (519)
++ .+| +|...|+++|.++|+++|+++++|++|+.|..+.++... ++|++++|+||. .||.| |+++++++. +
T Consensus 150 ~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~-~gp~g~G~l~~~~~~~~~ 225 (404)
T PRK14012 150 IMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKL---KVDLMSFSAHKI-YGPKGIGALYVRRKPRVR 225 (404)
T ss_pred EECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccC---CCCEEEEehhhc-cCCCceEEEEEecCCCCC
Confidence 88 555 899999999999999999999999999988776555443 689999999995 56766 888887642 2
Q ss_pred ccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCC
Q 010058 306 EIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGG 383 (519)
Q Consensus 306 ~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 383 (519)
..+ ..|+... .....|+++...+.++.+|++.... +.+...++..++++++.+.|++. ++.+....
T Consensus 226 ~~~~~~g~~~~-----------~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~ 293 (404)
T PRK14012 226 LEAQMHGGGHE-----------RGMRSGTLPTHQIVGMGEAARIAKE-EMATENERIRALRDRLWNGIKDIEEVYLNGDL 293 (404)
T ss_pred CCceecCCCcc-----------CCccCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCc
Confidence 222 2222110 0012367788888888888887653 56777888999999999999886 66654321
Q ss_pred C--CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC------------CCCCCCeEEeccCccccCCCCHHHHH
Q 010058 384 T--ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV------------SAMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 384 ~--~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~------------~~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
. ..+..++.+.. .+..++...|++.+|.....+.|... .....+.||++++.++| ++|++
T Consensus 294 ~~~~~~~~~~~~~~--~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t----~~dvd 367 (404)
T PRK14012 294 EQRVPGNLNVSFNY--VEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTT----EEEID 367 (404)
T ss_pred cccCCCEEEEEEeC--cCHHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCC----HHHHH
Confidence 1 12222233221 13456767776444443322223221 01134789999999988 99999
Q ss_pred HHHHHHHHHHHHH
Q 010058 450 KVAEFFDAAVKLA 462 (519)
Q Consensus 450 ~l~~~l~~~l~~~ 462 (519)
++++.|++++...
T Consensus 368 ~~~~~l~~~~~~~ 380 (404)
T PRK14012 368 YAIELVRKSIGKL 380 (404)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988754
No 40
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=6.9e-26 Score=225.48 Aligned_cols=330 Identities=16% Similarity=0.179 Sum_probs=235.0
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL- 162 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al- 162 (519)
+.+.+....++++.+++.+.+ ....+.+.++| +.+++++|+.+ .|.+.|||.|+..++.+|
T Consensus 9 ~~p~i~~~e~~~v~~vl~sg~---------i~~G~~v~~FE----~~~ae~~G~k~-----ava~~sgT~AL~laL~al~ 70 (374)
T COG0399 9 SRPSIGEEELAAVQEVLKSGW---------LTGGPFVRRFE----QAFAEYLGVKY-----AVAVSSGTAALHLALLALA 70 (374)
T ss_pred CCCCcchHHHHHHHHHHHcCC---------eecChHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHHHhcC
Confidence 334467788899999988743 12236778888 88999999998 399999999999899977
Q ss_pred cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccH
Q 010058 163 LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDY 242 (519)
Q Consensus 163 l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~ 242 (519)
+.|||+|+++++++-+... .+...|..+.+ .++|++++.+|++.||++|++ +||+|+.. +-+|...|+
T Consensus 71 ig~GDeVI~ps~TfvATan--------~i~~~Ga~PVF--vDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm 138 (374)
T COG0399 71 IGPGDEVIVPSFTFVATAN--------AVLLVGAKPVF--VDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDM 138 (374)
T ss_pred CCCCCEEEecCCchHHHHH--------HHHHcCCeEEE--EecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCH
Confidence 8999999999988877655 33345554444 468888999999999999998 89999874 448999999
Q ss_pred HHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHh
Q 010058 243 ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKI 322 (519)
Q Consensus 243 ~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i 322 (519)
+.|.+||++||++||.|+||+.|....|.....++.+.+++|-.+|.|+...||+++++++ ++.+++
T Consensus 139 ~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~-------------ela~k~ 205 (374)
T COG0399 139 DAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDE-------------ELAEKA 205 (374)
T ss_pred HHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccccCceEEEeCCH-------------HHHHHH
Confidence 9999999999999999999999999988766655556666666779998779999999996 445444
Q ss_pred hhcccCCCCCC---------c-cHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCC----Ccc
Q 010058 323 NQAVFPGLQGG---------P-HNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGT----ENH 387 (519)
Q Consensus 323 ~~~~~~~~~g~---------~-~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~ 387 (519)
......|.... + .+..+.-+.+|+...+...+++..++.+++++.+.+.|++. ++.+..... ..|
T Consensus 206 ~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~ 285 (374)
T COG0399 206 RSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWH 285 (374)
T ss_pred HHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeee
Confidence 33222222100 0 11112223334444444457888899999999999999987 444433222 234
Q ss_pred eeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCC------------------CCCCeEEeccCccccCCCCHHHHH
Q 010058 388 LVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA------------------MVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 388 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~------------------~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
++.+.+...+.+.+.+...|++.||.......|.+..+ .....+++-+.. +|+++|++
T Consensus 286 ~~~i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p----~l~~~~~~ 361 (374)
T COG0399 286 LYTILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHP----NLSEEDVD 361 (374)
T ss_pred eeEEEecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCC----CCCHHHHH
Confidence 55555544356788899999999887544444433211 012234443332 45589999
Q ss_pred HHHHHHHHHHH
Q 010058 450 KVAEFFDAAVK 460 (519)
Q Consensus 450 ~l~~~l~~~l~ 460 (519)
++++.|.+++.
T Consensus 362 ~V~~~l~~~~~ 372 (374)
T COG0399 362 RVIEALKEVLG 372 (374)
T ss_pred HHHHHHHHHhc
Confidence 99999998875
No 41
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.95 E-value=2.5e-26 Score=226.94 Aligned_cols=349 Identities=19% Similarity=0.231 Sum_probs=237.3
Q ss_pred cCeeec-CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 77 KGLELI-PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 77 ~~i~L~-a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
+.+.|. .+..++++.|++||...+.+-+ |+|++++| +.+.-+.+| ++|+.+++++|++++ +|.+|+|+| +
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~~y-~w~~~~~~E-~aR~~VAklInAd~~----dIiFts~ATEs 114 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSRSY-GWKAEDAVE-AAREQVAKLINADPS----DIVFTSGATES 114 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCcccc-chhhhHHHH-HHHHHHHHHhCCCCC----cEEEeCCchHH
Confidence 456665 4566789999999999998866 89998844 344444454 788999999999996 499999998 7
Q ss_pred HHHHHHhh-cCCCC----EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 155 NFQVYTAL-LKPHE----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 155 ~~~~~~al-l~pGD----~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
|..++.++ ..++| .|++++.+|.++....-.... .|..+..+|+ + +++.+|.+.+++.++. +|++|
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~-----~g~~Vt~lpv--~-~~~~~d~~~~~~~i~~-~T~lv 185 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQE-----EGLEVTYLPV--E-DSGLVDISKLREAIRS-KTRLV 185 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHHHHHHh-----cCeEEEEecc--C-ccccccHHHHHHhcCC-CceEE
Confidence 66688887 66888 999999999998765543222 2444555554 4 5689999999999998 99999
Q ss_pred EEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCC-cceEEeecc---
Q 010058 230 VAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR-GAMIFFRKG--- 303 (519)
Q Consensus 230 i~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gpr-gG~i~~~~~--- 303 (519)
.+. .+| .|...|+++|.++|++.++.+++|+||+.|.+..++... .+|+++++.|||+ ||+ .|++++++.
T Consensus 186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~el---n~D~~s~s~HK~y-gp~~iGaLYvr~~~~~ 261 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQEL---NADFLSISAHKIY-GPPGIGALYVRRKRPR 261 (428)
T ss_pred EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHc---Cchheeeeccccc-CCCcceEEEEccCCCc
Confidence 998 455 789999999999999999999999999999999998887 8999999999986 555 499999972
Q ss_pred ccccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCEEe
Q 010058 304 VKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYDLV 380 (519)
Q Consensus 304 ~~~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 380 (519)
.+..| ..||.....+ ..|+.....+.++..|.+.... ...-....+.+....+...+... ...+.
T Consensus 262 ~~~~p~~~GGgq~r~~-----------rsGT~~~~~~~~~gsA~e~~~~-~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~ 329 (428)
T KOG1549|consen 262 LRVEPPLSGGGQERGL-----------RSGTVATPLAVGLGSAAEFVNK-EMAYDEAIIKRLSEKLLMGIGQSLPEVTLN 329 (428)
T ss_pred ccccCcccCCcccccc-----------ccCCcCchhhhhhHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhhhCchhhcc
Confidence 23445 5555432221 2367777777777777776543 22222333334555555554332 22222
Q ss_pred cCCCCcceeeeeccCCCCcHHHHHHhhc----ccCeEEcccc-cCC-------CCCCCCCCeEEeccCccccCCCCHHHH
Q 010058 381 SGGTENHLVLVNLRNKGIDGSRVEKVLE----SVHIAANKNT-VPG-------DVSAMVPGGIRMGTPALTSRGFVEEDF 448 (519)
Q Consensus 381 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~----~~gI~v~~~~-~p~-------~~~~~~~~~iRi~~~~~ttrg~~~~di 448 (519)
..+....-..+.+...-..+..+...+. .-|..+..+. .|. .......++||||...+|+ ++|+
T Consensus 330 G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t----~~di 405 (428)
T KOG1549|consen 330 GSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTT----EEDI 405 (428)
T ss_pred CCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCc----HHHH
Confidence 2222211112222111011111111111 1222222111 111 1123457899999999999 9999
Q ss_pred HHHHHHHHHHHHHH
Q 010058 449 EKVAEFFDAAVKLA 462 (519)
Q Consensus 449 ~~l~~~l~~~l~~~ 462 (519)
+++++.+.+.+...
T Consensus 406 ~~~~~~i~~~v~~~ 419 (428)
T KOG1549|consen 406 DYLVDAIKKLVSLL 419 (428)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988754
No 42
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=1.5e-25 Score=228.51 Aligned_cols=340 Identities=18% Similarity=0.187 Sum_probs=225.5
Q ss_pred ecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-CcHHHHHHHH
Q 010058 81 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSL-SGSPANFQVY 159 (519)
Q Consensus 81 L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~-sGs~a~~~~~ 159 (519)
+.|+...+++.|++++...... + ...+ ..+.+.+++.+++++|++++. ..|.++ +|+.++..++
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~~-~-----------~~~~-~~~~~~~~~~la~~~~~~~~~--~~i~~~~~gt~~l~~~~ 67 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWCH-W-----------DSEF-NDVTDQVRDRLLALAGGDDNH--TCVLLQGSGTFAVEATI 67 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhccC-C-----------CHHH-HHHHHHHHHHHHHHhcCCCCC--cEEEEeCCcHHHHHHHH
Confidence 5677778899999999873322 1 0112 244556679999999997642 246554 5555888899
Q ss_pred HhhcCCCCEEEEecCCCccc-ccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-CCcEEEEc-ccc-
Q 010058 160 TALLKPHERIMALDLPHGGH-LSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-RPKLIVAG-ASA- 235 (519)
Q Consensus 160 ~all~pGD~Vl~~~~~~~~~-~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-k~klIi~~-~sn- 235 (519)
.+++.+||++++.+..+.+. +.. .....|..+..++ .+ +++.+|++++++.+++. ++++|+++ +++
T Consensus 68 ~~~~~~~~~vi~~~~~~~~~~~~~-------~a~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 137 (355)
T TIGR03301 68 GSLVPRDGKLLVLINGAYGERLAK-------ICEYLGIPHTDLN--FS-EYEPPDLNRIEEALAADPDITHVATVHHETT 137 (355)
T ss_pred HhccCCCCeEEEECCCchhhHHHH-------HHHHcCCceEEEe--cC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCc
Confidence 99999999988765332221 110 1122354455554 33 34679999999998752 34455555 334
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcc-
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQE- 313 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~- 313 (519)
+|...|+++|.++|+++|+++++|++|..|....++... ++|++++|+||++.|+.| |+++++++..-. ..+..
T Consensus 138 ~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~-~~~~~~ 213 (355)
T TIGR03301 138 TGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEEL---DVDALIASANKCLEGVPGFGFVIARRDLLEA-SAGNAR 213 (355)
T ss_pred ccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhc---CccEEEecCCcccccCCceeEEEECHHHHHH-hhCCCC
Confidence 789999999999999999999999998877554333322 689999999999988777 999998842100 00000
Q ss_pred -hhhhHHHHhhhcc-cCCCCCCccHHHHHHHHHHHHHhcCHh-HHHHHHHHHHHHHHHHHHHHhcCCEEecCCC-Ccc-e
Q 010058 314 -VMYAYEDKINQAV-FPGLQGGPHNHTISGLAVALKQVKTPE-YKAYQEQVLSNSSKFARSLLERGYDLVSGGT-ENH-L 388 (519)
Q Consensus 314 -~~~~~~~~i~~~~-~~~~~g~~~~~~iaal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~-~ 388 (519)
...+....+.... ......+++...+.++..+++.+...+ +++..++++++++++.+.|++.|++++.+.. .+. +
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~ 293 (355)
T TIGR03301 214 SLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPII 293 (355)
T ss_pred CceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcE
Confidence 0001110000000 011234678888888888888776555 7888899999999999999999988665422 222 2
Q ss_pred eeeeccC-CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 389 VLVNLRN-KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 389 ~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+++.+.. ...+..++.+.|.+.||.+. |+... ..++|||+++.+++ ++|++++++.|++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~l~~~gi~i~----~~~~~--~~~~iRis~~~~~~----~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 294 VSFLYPDDPDFDFDDFYQELKERGFVIY----PGKLT--LADTFRIGTIGEID----AADIERLLEAIKDAL 355 (355)
T ss_pred EEEECCCCCcchHHHHHHHHHHCCEEEE----CCccc--cccEEEEecCCCCC----HHHHHHHHHHHHhhC
Confidence 3444432 12455688899999999996 44321 12689999988777 899999999998753
No 43
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.95 E-value=2e-26 Score=235.01 Aligned_cols=302 Identities=18% Similarity=0.210 Sum_probs=221.2
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHh
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTA 161 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~a 161 (519)
++..++++.|++++.+.+.+.+ ++|+.+.+........+.+.+++++++++|++++ +|.+++|++ ++..++.+
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~~ 78 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVERARKQVAEALGADTE----EVIFTSGATESNNLAILG 78 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 4566789999999999886544 5665532221112233445677999999999874 589999987 87777777
Q ss_pred hc----CCC-CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc
Q 010058 162 LL----KPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA 235 (519)
Q Consensus 162 ll----~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn 235 (519)
+. ++| |.|++...+|+++..+.... ...|..++.+++ + +++.+|++++++.+++ ++++|+++ ++|
T Consensus 79 l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~-----~~~G~~v~~v~~--~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n 149 (353)
T TIGR03235 79 LARAGEQKGKKHIITSAIEHPAVLEPIRAL-----ERNGFTVTYLPV--D-ESGRIDVDELADAIRP-DTLLVSIMHVNN 149 (353)
T ss_pred HHHhcccCCCCeeeEcccccHHHHHHHHHH-----HhcCCEEEEEcc--C-CCCcCCHHHHHHhCCC-CCEEEEEEcccC
Confidence 75 366 78888888887776544321 123555555543 3 3578999999999976 89999888 555
Q ss_pred -ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc----ccc-
Q 010058 236 -YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK----EIN- 308 (519)
Q Consensus 236 -~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~----~~~- 308 (519)
+|...|+++|.++|+++|+++++|++|..|....++... ++|++++|+||+ .||.| |+++++++.. ..|
T Consensus 150 ~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~~~~~~~ 225 (353)
T TIGR03235 150 ETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSAD---RIDLISCSGHKI-YGPKGIGALVIRKRGKPKAPLKPI 225 (353)
T ss_pred CceeccCHHHHHHHHHHcCCEEEEEchhhcCCcccccccc---CCCEEEeehhhc-CCCCceEEEEEccCcccccccCce
Confidence 899999999999999999999999999999887776554 799999999998 57887 9999987521 112
Q ss_pred ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcce
Q 010058 309 KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHL 388 (519)
Q Consensus 309 ~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 388 (519)
..++.. ......|+++...++++.++++++. .+.++..+++.++++++.+.|++.|++++.+......
T Consensus 226 ~~~~~~-----------~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~ 293 (353)
T TIGR03235 226 MFGGGQ-----------ERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIP 293 (353)
T ss_pred eeCCCC-----------cCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccC
Confidence 111100 0011247899999999999999875 4678889999999999999998889988764332233
Q ss_pred eeeeccCCCCcHHHHHHhhcccCeEEcc
Q 010058 389 VLVNLRNKGIDGSRVEKVLESVHIAANK 416 (519)
Q Consensus 389 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~ 416 (519)
.++.+...+.++.++.+.|++ +|.++.
T Consensus 294 ~i~~~~~~~~~~~~v~~~L~~-~i~v~~ 320 (353)
T TIGR03235 294 HILNFSIDGVNSEALIVNLRA-DAAVST 320 (353)
T ss_pred CEEEEEeCCcCHHHHHHHHhC-CeEEEc
Confidence 345554457778889999965 898873
No 44
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.2e-25 Score=230.41 Aligned_cols=339 Identities=15% Similarity=0.139 Sum_probs=227.9
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..+++. +++.+.+++.+.+.+.. ..|+...+...+++.+.+++.+.+|...+. .+|++|+|++
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~ 103 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGW-------THYTPNAGIPELREAIAEYYKKFYGVDVDV--DNVIVTAGAY 103 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHHhCCCCCc--ccEEEeCChH
Confidence 456889887774 36788888888765422 223444556788877778887777753221 3699999988
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
++..++.++++|||+|++++++|.++.. .+...|..+..++ ++++ ++.+|++++++.+.+ ++++|++
T Consensus 104 ~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~i~~-~~~~v~i 172 (391)
T PRK08361 104 EATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEAKPIRIP--LREENEFQPDPDELLELITK-RTRMIVI 172 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCCEEEEEe--cCCccCCCCCHHHHHHhccc-ccEEEEE
Confidence 8888888999999999999987766543 2233455555554 4433 467999999999887 7898888
Q ss_pred c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC--C-CCCeEEEEcCCCcc--cCCCcceEEee
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP--F-EYADVVTTTTHKSL--RGPRGAMIFFR 301 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p--~-~~~di~~~S~~K~l--~GprgG~i~~~ 301 (519)
+ ++| +|...| +++|.++|+++++++|+|+++............. + ...++++.|++|++ +|.|.||++++
T Consensus 173 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~ 252 (391)
T PRK08361 173 NYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAP 252 (391)
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccC
Confidence 8 777 888888 7788888999999999999975332211111110 1 13578889999986 56778999998
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC-HhHHHHHHHHHHHHHHHHHHHHhc-CCEE
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT-PEYKAYQEQVLSNSSKFARSLLER-GYDL 379 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 379 (519)
+ ++.+.+..... ...++.+.....++..++..... ..+++.++++.++++.+.+.|++. |+.+
T Consensus 253 ~--------------~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 317 (391)
T PRK08361 253 E--------------QVIKDMIKLHA-YIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKV 317 (391)
T ss_pred H--------------HHHHHHHHHHh-hhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 7 44444332211 11122233333333444443211 235777888899999999999987 7765
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
..+ ..+.+.|+.+...+++..++.+.| +++||.+. ||.. +....+++||++.. + +++++..++.|.+
T Consensus 318 ~~p-~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~~--~----~~~l~~al~~l~~ 386 (391)
T PRK08361 318 FEP-KGAFYVFANIDETGMSSEDFAEWLLEKARVVVI----PGTAFGKAGEGYIRISYAT--S----KEKLIEAMERMEK 386 (391)
T ss_pred cCC-CEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEc----CchhhCCCCCCEEEEEecC--C----HHHHHHHHHHHHH
Confidence 543 334566777754456777777766 56899996 6554 33345789999763 3 5678777777777
Q ss_pred HHH
Q 010058 458 AVK 460 (519)
Q Consensus 458 ~l~ 460 (519)
+++
T Consensus 387 ~l~ 389 (391)
T PRK08361 387 ALE 389 (391)
T ss_pred HHh
Confidence 664
No 45
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=4.4e-25 Score=227.84 Aligned_cols=338 Identities=12% Similarity=0.066 Sum_probs=222.4
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.++|..+++. +|+.+++++.+.+.+.. .+ |+...+..++++.+.+++.+.+|.+.+. .+|.+|+|++
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~it~G~~ 102 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TR------YTAARGLPALREAIAGFYAQRYGVDVDP--ERILVTPGGS 102 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-Cc------cCCCCCCHHHHHHHHHHHHHHhCCCCCh--hhEEEccCcH
Confidence 456899888774 58899999998876421 12 3333556778877778877776753322 3699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
++..++.++++|||+|++++++|.++... +...|..+..+++ +.+ ++.+|++++++.+++ +++++++
T Consensus 103 ~al~~~~~~~~~~gd~vlv~~p~y~~~~~~--------~~~~g~~~~~v~~--~~~~~~~~d~~~l~~~~~~-~~~~i~i 171 (387)
T PRK08960 103 GALLLASSLLVDPGKHWLLADPGYPCNRHF--------LRLVEGAAQLVPV--GPDSRYQLTPALVERHWNA-DTVGALV 171 (387)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHH--------HHhcCCeEEEEec--CcccCCCCCHHHHHHHhCc-cceEEEE
Confidence 88778889999999999999888776542 2233555555554 433 467999999998886 7777777
Q ss_pred c-ccc-ccccccHH---HHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeec
Q 010058 232 G-ASA-YARLYDYA---RIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRK 302 (519)
Q Consensus 232 ~-~sn-~g~~~d~~---~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~ 302 (519)
+ ++| +|...+.+ +|+++|+++|+++|+|+++. .+...+.....+. ...+++.|++|.+ +|.|.||+++++
T Consensus 172 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~-~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~ 250 (387)
T PRK08960 172 ASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYH-GLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPP 250 (387)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCH
Confidence 6 777 88877754 66667899999999999864 2322211111111 2347788999976 788899999987
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
++.+.+.........+ ++.....+...++........++.++++.++++.+.+.|++.|+.+...
T Consensus 251 --------------~~~~~~~~~~~~~~~~-~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (387)
T PRK08960 251 --------------AAVPELEKLAQNLYIS-ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVE 315 (387)
T ss_pred --------------HHHHHHHHHHhhhccC-CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcC
Confidence 4555443322211112 2333333334455421123456778888999999999999988765332
Q ss_pred CCCcceeeeeccCCCCcHHHHHHh-hcccCeEEcccccCCCC-CC-CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 383 GTENHLVLVNLRNKGIDGSRVEKV-LESVHIAANKNTVPGDV-SA-MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 383 ~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~-~~-~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+..+.+.|+++...+.+..++.+. ++++||.+. ||.. +. ...+++|+++.. + .+++...++.|.+++
T Consensus 316 p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~~~~~~~iRi~~~~--~----~~~l~~al~~l~~~~ 385 (387)
T PRK08960 316 PQGAFYLYADISAFGGDAFAFCRHFLETEHVAFT----PGLDFGRHQAGQHVRFAYTQ--S----LPRLQEAVERIARGL 385 (387)
T ss_pred CCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEc----CchHhCCCCCCCeEEEEecC--C----HHHHHHHHHHHHHHH
Confidence 234566777765423456677655 567899997 5543 21 234689999773 3 466666666665544
No 46
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=1.7e-25 Score=230.62 Aligned_cols=333 Identities=15% Similarity=0.114 Sum_probs=218.0
Q ss_pred CeeecC--CCCCCcHHHHHHHhhHhhhccCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 78 GLELIP--SENFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 78 ~i~L~a--~en~~~~~V~ea~~~~l~~~~~~g~p~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
.|+|.+ --.++++++++|+.+.... + +.|.. .+..+ .......+.+++.+++++|++. +.+++|++
T Consensus 20 ~~~~~~~~~~~p~~~~~~~a~~~~~~~-~--~~~~~~~~~~~-~~~~~~~~~l~~~lA~~~g~~~------~~~~~g~t~ 89 (387)
T PRK09331 20 FINLDPIQRGGILTPEARKALIEYGDG-Y--SVCDYCPGRLD-QIKKPPIADFHEDLAEFLGMDE------ARVTHGARE 89 (387)
T ss_pred ccccChhhcCCCCCHHHHHHHHHHHhc-c--CCCcccccccc-cccChHHHHHHHHHHHHhCCCc------EEEeCCHHH
Confidence 355543 4457899999999988743 3 33322 11111 1111223445599999999974 45567766
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh------CCc
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF------RPK 227 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~------k~k 227 (519)
++.+++.++++|||+|++....|.+... .+...|..+..++...+ +++.+|++++++.+++. +++
T Consensus 90 a~~~al~~l~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~ 160 (387)
T PRK09331 90 GKFAVMHSLCKKGDYVVLDGLAHYTSYV--------AAERAGLNVREVPKTGY-PEYKITPEAYAEKIEEVKEETGKPPA 160 (387)
T ss_pred HHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCCEEEEEeCccC-cCCCcCHHHHHHHHHHhhhccCCCCE
Confidence 8998999999999999998866655532 22344655555554223 45789999999998753 689
Q ss_pred EEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc
Q 010058 228 LIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 304 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~ 304 (519)
+|+++ +++ +|...|+++|.++|+++|+++++|++|..|..+.+.... ++|++++|+||++++|.+ |++++++
T Consensus 161 lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~---g~D~~~~s~~K~l~~~~~~G~l~~~~-- 235 (387)
T PRK09331 161 LALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKL---GADFIVGSGHKSMAASAPSGVLATTE-- 235 (387)
T ss_pred EEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEECH--
Confidence 99888 545 899999999999999999999999999988665444333 689999999999977654 9999987
Q ss_pred ccccccCcchhhhHHHHhhhcccC-------CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFP-------GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G 376 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~-------~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 376 (519)
++.+.+.....+ ...++.......++.++++.+.. .....++..++++++++.|.++ |
T Consensus 236 ------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~l~g 301 (387)
T PRK09331 236 ------------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVE--RVKRWDEEVKKARWFVDELEKIEG 301 (387)
T ss_pred ------------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 333332221100 01122222233444445544322 1223455678888999999999 9
Q ss_pred CEEecCC-CCcceeeeecc-------CCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHH
Q 010058 377 YDLVSGG-TENHLVLVNLR-------NKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF 448 (519)
Q Consensus 377 ~~~~~~~-~~~~~~~v~~~-------~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di 448 (519)
++++... ....+..++.. ..+.++.++.+.|.++||..- +.+ ....+|+++.. .+ ++|+
T Consensus 302 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~----~~~----~~~i~ri~~~g-~t----~~di 368 (387)
T PRK09331 302 FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGI----KPG----ATKEFKLSTYG-LT----WEQV 368 (387)
T ss_pred EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEE----ccC----CceEEEEEecc-CC----HHHH
Confidence 9988532 22333333322 112234668889988999842 211 13346776644 34 7999
Q ss_pred HHHHHHHHHHHHH
Q 010058 449 EKVAEFFDAAVKL 461 (519)
Q Consensus 449 ~~l~~~l~~~l~~ 461 (519)
++++++|++++..
T Consensus 369 ~~l~~aL~~i~~~ 381 (387)
T PRK09331 369 EYVADAFKEIAEK 381 (387)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988763
No 47
>PRK07682 hypothetical protein; Validated
Probab=99.95 E-value=4.3e-25 Score=227.26 Aligned_cols=336 Identities=13% Similarity=0.102 Sum_probs=229.0
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD--PAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~--~~~~~~~V~~~sG 151 (519)
.+.|+|..+++. +++.+.+++.+.+.+.+ ..|+...+...+++.+.+++.+.+|.+ +++ +|.+|+|
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~---~i~~t~G 89 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-------TSYTANAGLLELRQEIAKYLKKRFAVSYDPND---EIIVTVG 89 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC---cEEEeCC
Confidence 356899888875 35677888877765422 123334566788888888888887864 321 5999999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klI 229 (519)
++ |+..++.++++|||+|++++++|+.+.. .+...|..+..++ .+. +++.+|++++++++.+ ++++|
T Consensus 90 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~v 158 (378)
T PRK07682 90 ASQALDVAMRAIINPGDEVLIVEPSFVSYAP--------LVTLAGGVPVPVA--TTLENEFKVQPAQIEAAITA-KTKAI 158 (378)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEee--cCCccCCCCCHHHHHhhcCc-ccEEE
Confidence 87 8888889999999999999977765432 2223344444444 332 3578999999998876 89998
Q ss_pred EEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCC-----CCCCCCeEEEEcCCCcc--cCCCcce
Q 010058 230 VAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIP-----SPFEYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 230 i~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~-----~p~~~~di~~~S~~K~l--~GprgG~ 297 (519)
+++ ++| +|..++ +++|.++|++|++++|+|+++..... .+... .+.....+++.|++|++ +|.|.||
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ 237 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTY-DEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF 237 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhccc-CCCCCChhhcccccCCEEEEecCcccccChhhhhhh
Confidence 777 767 787665 78888999999999999999653322 11100 01113468889999986 5888899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY 377 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 377 (519)
+++++ ++.+.+........ .+++.....++..+++.. ....++.+++++++++.+.+.|++.|+
T Consensus 238 ~~~~~--------------~~i~~l~~~~~~~~-~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~ 301 (378)
T PRK07682 238 IAAPV--------------YFSEAMLKIHQYSM-MCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGL 301 (378)
T ss_pred hhcCH--------------HHHHHHHHHHHhhc-cCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99987 45554433221111 122333344444555432 233577788899999999999999988
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
.+..+ ..+++.|+.+.+.+++..++.+.| +++||.+. ||.. ++..++++||++.. + ++++++.++.|
T Consensus 302 ~~~~p-~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----pg~~f~~~~~~~iRis~~~--~----~~~l~~~l~~l 370 (378)
T PRK07682 302 TCHVP-GGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVV----PGSVFGESGEGFIRCSYAT--S----LEQLQEAMKRM 370 (378)
T ss_pred ccCCC-CeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEc----CchhhCcCCCCeEEEEeCC--C----HHHHHHHHHHH
Confidence 76544 334555666654456677777665 57899997 5543 33346799999763 4 68999999999
Q ss_pred HHHHH
Q 010058 456 DAAVK 460 (519)
Q Consensus 456 ~~~l~ 460 (519)
+++++
T Consensus 371 ~~~l~ 375 (378)
T PRK07682 371 KRFVE 375 (378)
T ss_pred HHHHh
Confidence 88775
No 48
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=5.2e-25 Score=226.10 Aligned_cols=344 Identities=18% Similarity=0.175 Sum_probs=233.9
Q ss_pred HHHHHHHHHHHHhcc--cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC
Q 010058 62 PEIADIIELEKARQW--KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDP 139 (519)
Q Consensus 62 ~~~~~~~~~e~~~~~--~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~ 139 (519)
.++.+.+++..++.. ..| |.....++.|.+.+++.+.+...+ +++.. +.+ ...+++.+++++++++|++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~--~~~---~~~~~~~~~~~la~~~g~~~ 76 (371)
T PRK13520 5 EEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNL--GDPGL--FPG---TAKLEEEAVEMLGELLHLPD 76 (371)
T ss_pred HHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCC--CCccc--Ccc---HHHHHHHHHHHHHHHhCCCC
Confidence 455666655443321 123 554456678888899988776533 33322 222 34455677899999999875
Q ss_pred CCCcceEEeCCcHH-HHHHHHHhhcC----CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCH
Q 010058 140 AKWGVNVQSLSGSP-ANFQVYTALLK----PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDY 214 (519)
Q Consensus 140 ~~~~~~V~~~sGs~-a~~~~~~all~----pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~ 214 (519)
+ ++.+++|++ ++..++.++.+ +||+|++.+..|.++.. .+...|..++.++. + +++.+|+
T Consensus 77 ~----~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~--------~~~~~g~~~~~v~~--~-~~~~~d~ 141 (371)
T PRK13520 77 A----YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDK--------AADMLGVELRRAPL--D-DDYRVDV 141 (371)
T ss_pred C----CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHH--------HHHHcCceEEEecC--C-CCCcCCH
Confidence 3 355666655 88877776643 68999998876655322 22334655666654 3 3578999
Q ss_pred HHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CC--CCCCeEEEEcCCC
Q 010058 215 EQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SP--FEYADVVTTTTHK 288 (519)
Q Consensus 215 d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p--~~~~di~~~S~~K 288 (519)
+++++++++ ++++|++. +++ +|...|+++|.++|+++|+++++|++|..+..+..... .. ..++|.+++|+||
T Consensus 142 ~~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K 220 (371)
T PRK13520 142 KAVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHK 220 (371)
T ss_pred HHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcc
Confidence 999999987 67766655 444 89999999999999999999999999976654321111 11 1268999999999
Q ss_pred cccCC-CcceEEeecccccccccCcchhhhHHHHhhhcccCC--------CCCCccHHHHHHHHHHHHHhcCHhHHHHHH
Q 010058 289 SLRGP-RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPG--------LQGGPHNHTISGLAVALKQVKTPEYKAYQE 359 (519)
Q Consensus 289 ~l~Gp-rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~--------~~g~~~~~~iaal~~al~~~~~~~~~~~~~ 359 (519)
++.+| ++|++++.++ ++.+.+.. ..+. ..|+++...++++.++++.+...++++..+
T Consensus 221 ~~~a~~~~G~~~~~~~-------------~~~~~l~~-~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~ 286 (371)
T PRK13520 221 MGLAPIPAGGILFRDE-------------SYLDALAV-DTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVE 286 (371)
T ss_pred ccCccCCceEEEEcCH-------------HHHHhhcc-cCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHH
Confidence 87544 4466666542 23333211 0111 124455556777888888877778889999
Q ss_pred HHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccc
Q 010058 360 QVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALT 439 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~t 439 (519)
+..++++++.+.|++.|++++.+. ..+++.+.+. +..++.+.|.+.||.++.+ . .++++|++++.++
T Consensus 287 ~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v~~~~~----~~~~v~~~L~~~gi~v~~~----~----~~~~iRis~~~~~ 353 (371)
T PRK13520 287 RCMENTRWLAEELKERGFEPVIEP-VLNIVAFDDP----NPDEVREKLRERGWRVSVT----R----CPEALRIVCMPHV 353 (371)
T ss_pred HHHHHHHHHHHHHHhCCCEEecCC-CceEEEEecC----CHHHHHHHHHHCCceeccC----C----CCCEEEEEEECCC
Confidence 999999999999999998844332 2344444442 4678888898889998631 1 2467999988888
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 010058 440 SRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 440 trg~~~~di~~l~~~l~~~l~ 460 (519)
| ++|++++++.|+++++
T Consensus 354 t----~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 354 T----REHIENFLEDLKEVKK 370 (371)
T ss_pred C----HHHHHHHHHHHHHHhh
Confidence 8 9999999999998764
No 49
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.1e-24 Score=224.76 Aligned_cols=359 Identities=13% Similarity=0.089 Sum_probs=236.9
Q ss_pred hhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~ 131 (519)
++++....+.++..+....++..+.++|..+++. +++.+.+|+.+.+.+.. ...|+...+...+++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~~~G~~~lr~~~~~~l 78 (389)
T PRK05957 5 TSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPE------NHKYQAVQGIPPLLEAITQKL 78 (389)
T ss_pred hHHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCC------CCCCCCCCCCHHHHHHHHHHH
Confidence 3444445555665555544443456888877763 67889999988765421 122444456677888888999
Q ss_pred HHHcCCCCC-CCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCC
Q 010058 132 LDAFQLDPA-KWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDEST 209 (519)
Q Consensus 132 ~~~~g~~~~-~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~ 209 (519)
++.+|.+.+ . .+|.+++|++ ++..++.++++|||+|+++++.+..+.. .+...|..+..++ .+ ++
T Consensus 79 ~~~~g~~~~~~--~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~-~~ 145 (389)
T PRK05957 79 QQDNGIELNNE--QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGCQPILVP--TD-DN 145 (389)
T ss_pred HHHhCCCCCCC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCCEEEEee--cC-CC
Confidence 999997421 1 3699999998 7777888889999999999877765533 1223455555554 34 45
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCC--C-C--C
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSP--F-E--Y 278 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p--~-~--~ 278 (519)
+.+|++++++.+++ ++|+|+++ ++| +|...+ +++|.++|+++|+++++|+++.. +...+. ...+ + . .
T Consensus 146 ~~~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~ 223 (389)
T PRK05957 146 YQLQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEY-FTYDGVKHFSPGSIPGSGN 223 (389)
T ss_pred CCcCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchh-ccCCCCCccChhhCCCccC
Confidence 78999999999986 89999888 666 887776 88899999999999999998642 222211 1111 1 1 2
Q ss_pred CeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 279 ADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 279 ~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
-.+++.|++|.+ +|.|.|++++++ ++.+.+.........+. +.....++..+++.. ...+++
T Consensus 224 ~~i~~~S~SK~~g~~GlRiG~~~~~~--------------~~~~~~~~~~~~~~~~~-~~~~q~~~~~~l~~~-~~~~~~ 287 (389)
T PRK05957 224 HTISLYSLSKAYGFASWRIGYMVIPI--------------HLLEAIKKIQDTILICP-PVVSQYAALGALQVG-KSYCQQ 287 (389)
T ss_pred cEEEEecchhhccCccceeEEEecCH--------------HHHHHHHHHHhhcccCC-CcHHHHHHHHHHhCC-hHHHHH
Confidence 347788999976 678889999987 55555543322211122 222333333344321 123577
Q ss_pred HHHHHHHHHHHHHHHHHhc-CC-EEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEE
Q 010058 357 YQEQVLSNSSKFARSLLER-GY-DLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIR 432 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iR 432 (519)
..+++.++++.+.+.|++. |+ .+. +...+.++|+.+. .+++..++.+.| ++.||.+. ||+. +....+++|
T Consensus 288 ~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~gg~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iR 361 (389)
T PRK05957 288 HLPEIAQVRQILLKSLGQLQDRCTLH-PANGAFYCFLKVN-TDLNDFELVKQLIREYRVAVI----PGTTFGMKNGCYLR 361 (389)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccc-CCCeeEEEEEeCC-CCCChHHHHHHHHHHCCEEEc----cchhhCCCCCCEEE
Confidence 7888999999999999887 43 332 2233456677664 356777787776 46899996 6654 333356899
Q ss_pred eccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
|++...+ ++++++.++.|.+.++
T Consensus 362 is~~~~~-----~~~l~~~~~~l~~~~~ 384 (389)
T PRK05957 362 IAYGALQ-----KATAKEGIERLVQGLK 384 (389)
T ss_pred EEEecCC-----HHHHHHHHHHHHHHHH
Confidence 9986543 5777777777776664
No 50
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.6e-24 Score=224.47 Aligned_cols=332 Identities=15% Similarity=0.134 Sum_probs=224.8
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sG 151 (519)
.+.++|..+++. +++.+.+++.+.+.+....+|+ ..+...+++.+.+++.+.+|. ++++ +|++|+|
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-------~~G~~~lr~aia~~~~~~~g~~~~~~~---~I~it~G 101 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-------LSGIQEFHEAVTEYYNNTHNVILNADK---EVLLLMG 101 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-------CCCcHHHHHHHHHHHHHHhCCCCCCCC---eEEECCC
Confidence 456889877764 5788889888876532101222 134567887777888877775 4422 6999999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klI 229 (519)
++ ++..++.++++|||+|+++++.|..+.. .+...|..+..++ ++++ ++.+|++++++.+.+ ++++|
T Consensus 102 ~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~~~~~v~--~~~~~~~~~d~~~l~~~~~~-~~k~v 170 (399)
T PRK07681 102 SQDGLVHLPMVYANPGDIILVPDPGYTAYET--------GIQMAGATSYYMP--LKKENDFLPDLELIPEEIAD-KAKMM 170 (399)
T ss_pred cHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhcCCEEEEEe--cCCCCCCcCCHHHHHHhccc-cceEE
Confidence 98 8877888999999999999977766543 2334455555554 4433 467899999988876 89999
Q ss_pred EEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC---CC---CCeEEEEcCCCcc--cCCCcc
Q 010058 230 VAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP---FE---YADVVTTTTHKSL--RGPRGA 296 (519)
Q Consensus 230 i~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p---~~---~~di~~~S~~K~l--~GprgG 296 (519)
+++ |+| +|..++ +++|.++|+++|++||+|+++.. +...+....+ +. ...+++.|++|.+ +|.|.|
T Consensus 171 ~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG 249 (399)
T PRK07681 171 ILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAE-FYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIG 249 (399)
T ss_pred EEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchh-heeCCCCCCChhhCCCCcccEEEEeecccccCCccceeE
Confidence 998 777 888877 66778889999999999999653 2222211111 11 2357788999976 688889
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
|+++++ ++.+.+...... ...+++.....++..++... ...+++.++.+.++++.+.+.|++.|
T Consensus 250 ~~i~~~--------------~l~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g 313 (399)
T PRK07681 250 YMIGNE--------------EIVRALTQFKSN-TDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFG 313 (399)
T ss_pred EEecCH--------------HHHHHHHHHHhh-cccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999887 455554432211 11123333334444455432 13347777888999999999999988
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
+.+..+ ..+.++|+++.. +.+..++...|. ++||.+. ||.. +...++++||++. .+ ++++++.++.
T Consensus 314 ~~~~~p-~~g~f~~~~l~~-~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~--~~----~~~~~~~l~~ 381 (399)
T PRK07681 314 WNVDKP-AGSMFVWAEIPK-GWTSLSFAYALMDRANVVVT----PGHAFGPHGEGFVRIALV--QD----EEVLQQAVEN 381 (399)
T ss_pred CcccCC-CeeeEEEEECCC-CCCHHHHHHHHHHhCCEEEe----CChhhCcCCCCeEEEEec--CC----HHHHHHHHHH
Confidence 876443 345677777643 456667766654 4999996 6554 3333578999986 33 6888888888
Q ss_pred HHH
Q 010058 455 FDA 457 (519)
Q Consensus 455 l~~ 457 (519)
|.+
T Consensus 382 l~~ 384 (399)
T PRK07681 382 IRN 384 (399)
T ss_pred HHH
Confidence 876
No 51
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=2e-24 Score=222.66 Aligned_cols=334 Identities=15% Similarity=0.117 Sum_probs=224.0
Q ss_pred cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcc-eEEeCCc
Q 010058 75 QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGV-NVQSLSG 151 (519)
Q Consensus 75 ~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~-~V~~~sG 151 (519)
+.+.++|..+++. +++.+.+++.+.+.+....+ |+...+..++++.+++++.+.+|.+.+. . +|++|+|
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------Y~~~~G~~~lr~~ia~~~~~~~~~~~~~--~~~vi~t~G 99 (383)
T TIGR03540 28 GVDVISLGIGDPDLPTPKHIVEALCKAAENPENHR------YPSYEGMLAYRQAVADWYKRRFGVELDP--ETEVLSLIG 99 (383)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHHHHHHHhhCCCCCC--CCeEEECCC
Confidence 3466888877764 47788999888765421112 3444556778888888888887874221 2 5899999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klI 229 (519)
++ ++..++.++++|||+|++++++++.+.. .+...|..+..++ ++++ ++.+|++++++.+.+ ++++|
T Consensus 100 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~G~~v~~v~--~~~~~g~~~d~~~l~~~~~~-~~~~v 168 (383)
T TIGR03540 100 SKEGIAHIPLAFVNPGDIVLVPDPGYPVYRI--------GTLFAGGEPYEMP--LKEENGFLPDFDAIPEDIAK-KAKLM 168 (383)
T ss_pred cHHHHHHHHHHhCCCCCEEEEeCCCCcchHH--------HHHhcCCEEEEEe--cCcccCCccCHHHHHhhccc-cceEE
Confidence 87 8877888999999999999977766543 2234455555555 4433 467899999998876 89999
Q ss_pred EEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCC--CC---CCCeEEEEcCCCcc--cCCCcc
Q 010058 230 VAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPS--PF---EYADVVTTTTHKSL--RGPRGA 296 (519)
Q Consensus 230 i~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~--p~---~~~di~~~S~~K~l--~GprgG 296 (519)
+++ ++| +|...+ +++|.++|++||+++|+|+++..... .+. .++ .+ ....+++.|++|++ +|.|.|
T Consensus 169 ~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~-~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG 247 (383)
T TIGR03540 169 FINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITF-DGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIG 247 (383)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhcc-CCCCCcCcccCCCcccCEEEEEecccccCCccceee
Confidence 998 777 888877 67888889999999999999753222 111 111 11 12347788999977 588889
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
|+++++ ++.+++...... ...+++.....++..++... ....++..+++.++++.+.+.|++.|
T Consensus 248 ~~i~~~--------------~l~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~ 311 (383)
T TIGR03540 248 MAVGNA--------------DLIAGLGKVKTN-VDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIG 311 (383)
T ss_pred EEeCCH--------------HHHHHHHHHHHh-cccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999887 555544432211 11223333344444555432 23457778888999999999999999
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
+.+..+ ..+.++|+.+.+ +++..++.+.| ++.||.+. ||.. +....+++||++. .+ ++++...++.
T Consensus 312 ~~~~~~-~~~~~~~~~l~~-~~~~~~~~~~ll~~~gi~v~----~g~~f~~~~~~~~Ris~~--~~----~~~l~~~l~~ 379 (383)
T TIGR03540 312 IDVEKP-KATFYVWVPVPE-GYTSAEFAARLLEETGVVVT----PGVGFGEYGEGYIRISLT--VP----DERLEEAVAR 379 (383)
T ss_pred CEecCC-CcceEEEEECCC-CCCHHHHHHHHHHHCCEEEe----cchhhCccCCCeEEEEec--CC----HHHHHHHHHH
Confidence 877654 235566777643 56777777665 67899997 5544 2223578999985 23 4666666555
Q ss_pred HH
Q 010058 455 FD 456 (519)
Q Consensus 455 l~ 456 (519)
|.
T Consensus 380 l~ 381 (383)
T TIGR03540 380 IK 381 (383)
T ss_pred Hh
Confidence 53
No 52
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.4e-24 Score=223.66 Aligned_cols=335 Identities=15% Similarity=0.103 Sum_probs=221.9
Q ss_pred ccCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..++| ++++.+++++.+.+.+... ..|+..++..+++ +++++++|++++ +|.+++|++
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr----~~ia~~l~~~~~----~v~~~~g~t 93 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEY------CKYPPPEGFPELR----ELILKDLGLDDD----EALITAGAT 93 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCC------CCCCCCcchHHHH----HHHHHhcCCCCC----cEEEeCCHH
Confidence 45688887777 4588999999988765221 1234444555565 788888999874 599999988
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.+++.+||+|+++++.+..+.. .+...|..+..++...+++++.+|++++++.+.+ ++++|+++
T Consensus 94 ~al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~ 164 (380)
T PRK06225 94 ESLYLVMRAFLSPGDNAVTPDPGYLIIDN--------FASRFGAEVIEVPIYSEECNYKLTPELVKENMDE-NTRLIYLI 164 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHHhCceEEeeccccccCCccCCHHHHHhhcCC-CceEEEEe
Confidence 8888888999999999998865543321 1223455555554322223468999999999886 89998877
Q ss_pred -ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC-CCCeEEEEcCCCcc--cCCCcceEEeeccc
Q 010058 233 -ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF-EYADVVTTTTHKSL--RGPRGAMIFFRKGV 304 (519)
Q Consensus 233 -~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~-~~~di~~~S~~K~l--~GprgG~i~~~~~~ 304 (519)
++| +|... ++++|.++|+++|+++|+|+++. .+.........+ +...+++.|++|++ +|.|.|++++++
T Consensus 165 ~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~-- 241 (380)
T PRK06225 165 DPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR-DFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATP-- 241 (380)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH-HHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCH--
Confidence 666 78655 48889999999999999999853 111110000000 13467778889987 466779999987
Q ss_pred ccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCC
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGG 383 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 383 (519)
++.+.+...... . .+.+....++...++... ....++..+.+.++++.+.+.|++. |+.+...+
T Consensus 242 ------------~l~~~~~~~~~~-~-~~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 306 (380)
T PRK06225 242 ------------DLIEVVKSIVIN-D-LGTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYP 306 (380)
T ss_pred ------------HHHHHHHHHHhc-c-cCCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCC
Confidence 455544432211 1 222333333334444432 2233555666777888888899885 64332222
Q ss_pred CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC--CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV--SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
....++++.+...+++..++.+.|.+.||.+. ||.. .....+++|+++.. + +++++++++.|++++..
T Consensus 307 ~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~----~g~~~~~~~~~~~iR~s~~~--~----~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 307 SHGNMMVIDISEAGIDPEDLVEYLLERKIFVR----QGTYTSKRFGDRYIRVSFSI--P----REQVEVFCEEFPDVVET 376 (380)
T ss_pred CCCeEEEEEcccccCCHHHHHHHHHHCCEEEc----CCcccCcCCCCceEEEEeCC--C----HHHHHHHHHHHHHHHHH
Confidence 33456788776555678889988889999996 4432 12235789999753 4 79999999999998864
No 53
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=4.3e-25 Score=224.74 Aligned_cols=319 Identities=17% Similarity=0.169 Sum_probs=219.1
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHE 167 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~-~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD 167 (519)
+|+|++++.+.+.+ |..++.+.+++.+ ++....+ ++.+++++|++. .+++++|++++.+++.++++|||
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l----~~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd 86 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLISGTSDLHEEL----EEELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGD 86 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeecCCchHHHHH----HHHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCC
Confidence 58999999999975 5333333333322 3334444 488889999863 48888998888888889999999
Q ss_pred EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh----hCCcEEEEc-ccc-cccccc
Q 010058 168 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL----FRPKLIVAG-ASA-YARLYD 241 (519)
Q Consensus 168 ~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~----~k~klIi~~-~sn-~g~~~d 241 (519)
+|++.++.|++.... ....|..+..++ .+|.+++++.+++ .++++++++ ++| +|...|
T Consensus 87 ~Vl~~~~~~~~~~~~--------~~~~g~~~~~~~--------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 87 LIISDSLNHASIIDG--------IRLSGAKKRIFK--------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred EEEEehhhhHHHHHH--------HHHcCCceEEec--------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 999988777665432 222344333322 2578888888875 356777776 444 789999
Q ss_pred HHHHHHHHhhcCCEEEehhhhhhhccccCC-----CCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhh
Q 010058 242 YARIRKVCDKQKAVMLADMAHISGLVAAGV-----IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMY 316 (519)
Q Consensus 242 ~~~i~~ia~~~~~~livD~ah~~g~~~~~~-----~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~ 316 (519)
+++|+++|+++|+++|+|++|..|...... .+....+.|++++|+||++++ +||+++.++
T Consensus 151 ~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~gG~i~~~~-------------- 215 (349)
T cd06454 151 LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VGGYIAGSK-------------- 215 (349)
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cCCEEECCH--------------
Confidence 999999999999999999999776553210 010112679999999998854 789988876
Q ss_pred hHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccC
Q 010058 317 AYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRN 395 (519)
Q Consensus 317 ~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~ 395 (519)
++.+.+.....+.. .++.+...++++.++++.... ++...+++.++++.+.+.|.+.|+.++.++ .+.+.++.+ +
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~~~-~ 291 (349)
T cd06454 216 ELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSP-SHIIPPLIG-D 291 (349)
T ss_pred HHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCcEEEEeC-C
Confidence 44444433322222 245566677777788887654 567789999999999999999888766542 222222222 2
Q ss_pred CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 396 KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 396 ~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
.+.+..++.+.|.+.||.++....+. .....+.||++++.+++ ++|++++++.|+++
T Consensus 292 ~~~~~~~~~~~L~~~gI~~~~~~~~~--~~~~~~~iRi~~~~~~~----~~~i~~~~~~l~~~ 348 (349)
T cd06454 292 DPAKAVAFSDALLERGIYVQAIRYPT--VPRGTARLRISLSAAHT----KEDIDRLLEALKEV 348 (349)
T ss_pred ChHHHHHHHHHHHhCCceEEEecCCc--cCCCCCeEEEEEeCCCC----HHHHHHHHHHHHHh
Confidence 23456778888888899997421111 11234789999988788 89999999999764
No 54
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.94 E-value=1.2e-24 Score=224.59 Aligned_cols=336 Identities=15% Similarity=0.119 Sum_probs=222.6
Q ss_pred cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCC
Q 010058 75 QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLS 150 (519)
Q Consensus 75 ~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~s 150 (519)
..+.++|..+++. +++.+.+++.+.+.+... ..|+...+...+++++.+++.+.+|. ++++ +|++|+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~I~it~ 99 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHDPST------HGYLLFHGTLDFREAAAQWYEQRFGLAVDPET---EVLPLI 99 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCccc------CCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcC---eEEECC
Confidence 3466899888874 478899999887653211 12333355677888888888877775 4531 599999
Q ss_pred cHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcE
Q 010058 151 GSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKL 228 (519)
Q Consensus 151 Gs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~kl 228 (519)
|++ ++..++.++++|||+|++.++++..+.. .+...|..+..+++ +++ ++.+|++++++.+.. ++|+
T Consensus 100 Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~~--~~~~~~~~d~~~l~~~~~~-~~k~ 168 (388)
T PRK07366 100 GSQEGTAHLPLAVLNPGDFALLLDPGYPSHAG--------GVYLAGGQIYPMPL--RAENDFLPVFADIPTEVLA-QARL 168 (388)
T ss_pred CcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCEEEEEEC--CCccCCCCCHHHHHHhhcc-cceE
Confidence 998 8888888999999999999977766543 33445665555554 433 467899999888776 7999
Q ss_pred EEEc-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCC--CCCC--CC---CCeEEEEcCCCcc--cCCC
Q 010058 229 IVAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGV--IPSP--FE---YADVVTTTTHKSL--RGPR 294 (519)
Q Consensus 229 Ii~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~p--~~---~~di~~~S~~K~l--~Gpr 294 (519)
|+++ ++| +|...+. ++|.++|+++|++||+|+++.. +...+. .++. +. ...+++.|++|++ +|.|
T Consensus 169 i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlR 247 (388)
T PRK07366 169 MVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVD-LVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFR 247 (388)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhh-cccCCCCCCCChhhCCCCcccEEEEeecccccCCcchh
Confidence 9988 667 8877765 5666788999999999998542 222221 1111 11 1246788999976 7899
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
.||+++++ ++.+.+.....+...+++.....++ .+++.. ....+++.++.++++++.+.+.|++
T Consensus 248 iG~~v~~~--------------~li~~l~~~~~~~~~~~~~~~~~~a-~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~ 311 (388)
T PRK07366 248 IGFAIGNA--------------QLIQALRQVKAVVDFNQYRGILNGA-IAALTG-PQATVQQTVQIFRQRRDAFINALHQ 311 (388)
T ss_pred heehcCCH--------------HHHHHHHHHHhhcccCCCHHHHHHH-HHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999887 5555554432221112222222222 233322 1234578889999999999999999
Q ss_pred cCCEEecCCCCcceeeeeccCC-CCcHHHHHH-hhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 375 RGYDLVSGGTENHLVLVNLRNK-GIDGSRVEK-VLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 375 ~g~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~-~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
.|+.+..+ ..+.++|+.+... +.+..++.+ .+++.||.+. ||.. +....+++||++.. + ++++++.
T Consensus 312 ~~~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~~--~----~~~l~~~ 380 (388)
T PRK07366 312 IGWPVPLP-EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAAS----PGSGFGKSGEGYVRFALVH--D----PDILEEA 380 (388)
T ss_pred CCCcccCC-CeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEe----CchHhCcCCCCeEEEEecC--C----HHHHHHH
Confidence 88765443 3456777776532 123556654 4578899996 6654 32335789999752 3 6788888
Q ss_pred HHHHHHH
Q 010058 452 AEFFDAA 458 (519)
Q Consensus 452 ~~~l~~~ 458 (519)
++.|.+.
T Consensus 381 l~rl~~~ 387 (388)
T PRK07366 381 VERIAAF 387 (388)
T ss_pred HHHHHHh
Confidence 8777654
No 55
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.94 E-value=1.4e-24 Score=223.44 Aligned_cols=346 Identities=18% Similarity=0.210 Sum_probs=232.0
Q ss_pred ccCeeecCCCCCC---cH----HHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe
Q 010058 76 WKGLELIPSENFT---SV----SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS 148 (519)
Q Consensus 76 ~~~i~L~a~en~~---~~----~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~ 148 (519)
.+.+.|-.++.++ ++ ++.+++.+.+... ...|++..+..++| +.++++||.++ -|.+
T Consensus 11 ~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~g-------d~~Y~~~~g~~~Le----eaia~~~g~~~-----vv~t 74 (431)
T cd00617 11 YNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLG-------DEAYAGSKSFYDLE----DAVQDLFGFKH-----IIPT 74 (431)
T ss_pred CCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhC-------CCccCCCCCHHHHH----HHHHHHHCCCe-----EEEc
Confidence 3556665555531 22 4444445554431 12356667778888 77778888875 2555
Q ss_pred CCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC-------CCCCCCCHHHHHHHh
Q 010058 149 LSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD-------ESTGYIDYEQLEKSA 221 (519)
Q Consensus 149 ~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d-------~~~~~iD~d~l~~~i 221 (519)
++|+.|+..++.++++|||+|+ +++.+..+.. .+...|..+..++.+.+ +.++.+|+++|++++
T Consensus 75 ~~Gt~Al~la~~al~~pGD~V~-~~~~f~~~~~--------~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I 145 (431)
T cd00617 75 HQGRGAENILFSILLKPGRTVP-SNMHFDTTRG--------HIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLI 145 (431)
T ss_pred CCHHHHHHHHHHHhCCCCCEEc-cCCcccchHH--------HHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHh
Confidence 5555599989999999999874 5433333222 34455655555554321 124569999999999
Q ss_pred hhh---CCcEEEEc-ccc-c-ccccc---HHHHHHHHhhcCCEEEehhhhhhhccc------cCCCCCC--------CCC
Q 010058 222 ALF---RPKLIVAG-ASA-Y-ARLYD---YARIRKVCDKQKAVMLADMAHISGLVA------AGVIPSP--------FEY 278 (519)
Q Consensus 222 ~~~---k~klIi~~-~sn-~-g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~------~~~~~~p--------~~~ 278 (519)
++. ++++|+++ ++| + |.+.+ +++|+++|++||++||.|+||+.+-.. .+....+ +.+
T Consensus 146 ~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~ 225 (431)
T cd00617 146 DEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSY 225 (431)
T ss_pred CcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhcc
Confidence 863 37888887 666 4 66664 567899999999999999998865221 1222222 237
Q ss_pred CeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhhcc--cCCC--CCCccHHHHHHHHHHHHHhcCHhH
Q 010058 279 ADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAV--FPGL--QGGPHNHTISGLAVALKQVKTPEY 354 (519)
Q Consensus 279 ~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~--~~~~--~g~~~~~~iaal~~al~~~~~~~~ 354 (519)
+|.+++|++|.+.++-||+++++++ ++.+++.... +.+. .|+.+...++|++.+|.+..+
T Consensus 226 sd~~~mS~~K~~~~~~GG~i~~~d~-------------~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--- 289 (431)
T cd00617 226 ADGCTMSAKKDGLVNIGGFLALRDD-------------ELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--- 289 (431)
T ss_pred CCEEEEEeecCCCCccceEEEeCcH-------------HHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc---
Confidence 8999999999988888999999984 4666655322 1221 256666777888778876433
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC-------CCcHHHHH-HhhcccCeEEccc-c--cCCCC
Q 010058 355 KAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK-------GIDGSRVE-KVLESVHIAANKN-T--VPGDV 423 (519)
Q Consensus 355 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~-~~L~~~gI~v~~~-~--~p~~~ 423 (519)
.++.++..+++++|.+.|.+.|++++.+ ...|.+++++... +.++..+. .++.+.||.+... . .+.++
T Consensus 290 ~~~l~~~~~~r~~l~~~L~~~G~~v~~P-~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~ 368 (431)
T cd00617 290 EDYLRHRVEQVRYLGDRLDEAGVPIVEP-AGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDP 368 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCccCC-CcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCC
Confidence 2445566667799999999999998875 4568999987531 22455655 5678899986432 2 13222
Q ss_pred -CC----CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 010058 424 -SA----MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIK 466 (519)
Q Consensus 424 -~~----~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~ 466 (519)
.. .....+|++++ .|+++.++|+.+++.|.++.++...++
T Consensus 369 ~~~~~~~~~~~~~rl~~p---rr~~t~~~~~~~~~~~~~~~~~~~~~~ 413 (431)
T cd00617 369 NTGENKYPELELVRLAIP---RRVYTQDHMDYVAAAVIALYERREDIR 413 (431)
T ss_pred CCCcccCCccceeEEecc---ccccCHHHHHHHHHHHHHHHhhHhhCC
Confidence 11 12478999988 688999999999999999998876654
No 56
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.94 E-value=3.4e-25 Score=216.02 Aligned_cols=306 Identities=14% Similarity=0.091 Sum_probs=207.8
Q ss_pred hhhhhhcCHHHHHHHHHHHHhcccCee-ecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEKARQWKGLE-LIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 130 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~~~~~~~i~-L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~ 130 (519)
++.++...|++|..+.+..... ...+ |..+.. ++|+.|.+++.+...+.. ...|....+..++.+..++.
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e~-~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~------~~qYt~~~G~p~L~~aL~k~ 81 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAEH-KVPNPLGQGFPDFPPPKFVTEAAKNAAKEPS------TNQYTRGYGLPQLRKALAKA 81 (420)
T ss_pred cccccccCCcHHHHHHHHHHhc-CCCCcccCCCCCCCCcHHHHHHHHHHhccch------hccccccCCchHHHHHHHHH
Confidence 3556777788888887754332 2334 766644 468889999988776531 11122223456777777799
Q ss_pred HHHHcCCC--CCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeee---
Q 010058 131 ALDAFQLD--PAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR--- 204 (519)
Q Consensus 131 ~~~~~g~~--~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~--- 204 (519)
+++++|.. ++ .+|.+|+|+. ++..++++++++||+|++.++.+.++.. .+.+.|...+.++..
T Consensus 82 ~se~~~~~~~~~---~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~--------~~~maG~tpv~v~~~~~~ 150 (420)
T KOG0257|consen 82 YSEFYGGLLDPD---DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIP--------QVVMAGGTPVFVPLKPKE 150 (420)
T ss_pred HHHHhccccCCc---ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhh--------HHhhcCCcceeecccccc
Confidence 99988863 33 3699999998 8888999999999999999966655543 566777777777654
Q ss_pred --eCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC---
Q 010058 205 --LDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--- 274 (519)
Q Consensus 205 --~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--- 274 (519)
...+++.+|.++++.++++ |||+|++| |+| +|...+ +++|++||++||+++|+|+++-.-......+..
T Consensus 151 g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as 229 (420)
T KOG0257|consen 151 GNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS 229 (420)
T ss_pred ccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence 1235789999999999998 99999999 777 785554 889999999999999999985322221111111
Q ss_pred -C-CCCCeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 275 -P-FEYADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 275 -p-~~~~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
| +-...+.++|++|++ +|||.||+++++ .+............ .+.+.....|.++|+....
T Consensus 230 lPgm~ertitvgS~gKtf~~TGWrlGW~igp~--------------~L~~~~~~vh~~~~-~~~~Tp~q~A~a~a~~~~~ 294 (420)
T KOG0257|consen 230 LPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--------------HLYSALFPVHQNFV-FTCPTPIQEASAAAFALEL 294 (420)
T ss_pred CCchhheEEEeccccceeeeeeeeeeeeechH--------------HhhhhHHHHhhccc-cccCcHHHHHHHHHHhhhh
Confidence 1 113567788999975 799999999965 22222111111111 1112222333333333222
Q ss_pred ---CH---hH-HHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeecc
Q 010058 351 ---TP---EY-KAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLR 394 (519)
Q Consensus 351 ---~~---~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~ 394 (519)
++ .+ ..+.+.++++++.|.+.|.++|+++..+ ..+.++|+++.
T Consensus 295 ~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p-~gayyl~adfs 344 (420)
T KOG0257|consen 295 ACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGP-EGAYYLWADFS 344 (420)
T ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCceEEEEecc
Confidence 11 34 4488999999999999999999998665 45678888887
No 57
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=1.4e-24 Score=224.29 Aligned_cols=338 Identities=12% Similarity=0.077 Sum_probs=222.8
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.++|..+++. +++.+.+++.+.+.+.. ..|+...+...+++.+.+++.+.+|++.+. .+|.+|+|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~t~G~~ 100 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRGV-------TQYTSALGLAPLREAIAAWYARRFGLDVAP--ERIVVTAGAS 100 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCh--HhEEEecCcH
Confidence 456888877764 47788999888775421 224444556778877778888877864322 3699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
++..++.+++++||+|++++++|+++... +...|..+..++ .+. +++.+|++++++.+.+ ++++|++
T Consensus 101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~--------~~~~g~~~~~~~--~~~~~~~~~~~~~l~~~~~~-~~~~v~l 169 (388)
T PRK07337 101 AALLLACLALVERGDEVLMPDPSYPCNRHF--------VAAAEGRPVLVP--SGPAERFQLTAADVEAAWGE-RTRGVLL 169 (388)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHHH--------HHHcCCEEEEee--cCCccCCcCCHHHHHhhcCc-cceEEEE
Confidence 87778888999999999999888776432 222344444444 443 3568999999999886 8888888
Q ss_pred c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CCe-EEEEcCCCcc--cCCCcceEEeec
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YAD-VVTTTTHKSL--RGPRGAMIFFRK 302 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~d-i~~~S~~K~l--~GprgG~i~~~~ 302 (519)
+ ++| +|...+ +++|.++|+++++++|+|+++. ++...+...+.+. +.+ +++.|++|.+ +|.|.||+++++
T Consensus 170 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~ 248 (388)
T PRK07337 170 ASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQ-GLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPE 248 (388)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCH
Confidence 7 777 887665 6778888899999999999854 2322221111111 223 4567899976 688899999987
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
++.+.+.........+. +.....++..++..-....+++.+++++++++.+.+.|++.|+.+...
T Consensus 249 --------------~l~~~l~~~~~~~~~~~-s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~ 313 (388)
T PRK07337 249 --------------ALVGTFEKLAQNLFICA-SALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVM 313 (388)
T ss_pred --------------HHHHHHHHHHHHhccCC-ChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Confidence 44554443322211122 222333333444321113457778888999999999999988764322
Q ss_pred CCCcceeeeeccCC----CCcHHHHHH-hhcccCeEEcccccCCCC-CC-CCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 383 GTENHLVLVNLRNK----GIDGSRVEK-VLESVHIAANKNTVPGDV-SA-MVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 383 ~~~~~~~~v~~~~~----~~~~~~~~~-~L~~~gI~v~~~~~p~~~-~~-~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
+..+.++|+++... ..+..++.. .|+++||.+. ||.. +. ...+++||++.. + +++++..++.|
T Consensus 314 p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----pg~~f~~~~~~~~~Ri~~~~--~----~~~l~~~l~rl 383 (388)
T PRK07337 314 PDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLV----PGRDFGPHAPRDYIRLSYAT--S----MSRLEEAVARL 383 (388)
T ss_pred CCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCCEEEEEecC--C----HHHHHHHHHHH
Confidence 24456778887531 245666654 4678999996 5554 21 235799999874 3 57777777777
Q ss_pred HHHH
Q 010058 456 DAAV 459 (519)
Q Consensus 456 ~~~l 459 (519)
.+++
T Consensus 384 ~~~l 387 (388)
T PRK07337 384 GKLF 387 (388)
T ss_pred HHHh
Confidence 6543
No 58
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=7.3e-25 Score=227.66 Aligned_cols=325 Identities=16% Similarity=0.227 Sum_probs=225.8
Q ss_pred CCCCCC----cHHHHHHHhhHhhhccCCCCC--CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHH
Q 010058 83 PSENFT----SVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 83 a~en~~----~~~V~ea~~~~l~~~~~~g~p--~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~ 156 (519)
.|.+++ .|.|++++.+.+.. +. +.+ ++.+..+.+...++| +.+++++|.+. .+++++|+.||.
T Consensus 60 ~~~~YL~l~~~p~v~~a~~~~~~~-~~-~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~sG~~An~ 128 (407)
T PRK07179 60 QSNDYLNLSGHPDIIKAQIAALQE-EG-DSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES-----CLLCQSGWAANV 128 (407)
T ss_pred ecCCccCCCCCHHHHHHHHHHHHH-hC-CCCCccccccCCchHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHH
Confidence 455554 68999999998865 41 122 334555545566666 78889999865 377777877999
Q ss_pred HHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc
Q 010058 157 QVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA 235 (519)
Q Consensus 157 ~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn 235 (519)
.++.++..+||.|++..+.|.+... .+...|.. .+++ ...|++++++++++.++++|+++ ++|
T Consensus 129 ~~l~~l~~~g~~v~~~~~~h~s~~~--------~~~~~g~~--~~~~------~~~d~~~l~~~l~~~~~~lV~v~~v~n 192 (407)
T PRK07179 129 GLLQTIADPNTPVYIDFFAHMSLWE--------GVRAAGAQ--AHPF------RHNDVDHLRRQIERHGPGIIVVDSVYS 192 (407)
T ss_pred HHHHHhCCCCCEEEEECCcCHHHHH--------HHHHCCCe--EEEe------cCCCHHHHHHHHHhcCCeEEEECCCCC
Confidence 9999999999999987766655532 11122322 2222 23589999999876457888887 444
Q ss_pred -ccccccHHHHHHHHhhcCCEEEehhhhhhhcccc-C--CC-CCCC-CCCeEEEEcCCCcccCCCcceEEeecccccccc
Q 010058 236 -YARLYDYARIRKVCDKQKAVMLADMAHISGLVAA-G--VI-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 309 (519)
Q Consensus 236 -~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~-~--~~-~~p~-~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~ 309 (519)
+|...|+++|.++|+++|+++|+|++|..|.... + .. ..++ ..+|++++|+||+++ +++|++++++
T Consensus 193 ~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~------- 264 (407)
T PRK07179 193 TTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPR------- 264 (407)
T ss_pred CCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCH-------
Confidence 7999999999999999999999999998664321 1 00 1111 156999999999985 5799999987
Q ss_pred cCcchhhhHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcce
Q 010058 310 QGQEVMYAYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHL 388 (519)
Q Consensus 310 ~g~~~~~~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 388 (519)
++.+.+.....+.. .+++..+.++++.++++.+.. .+..++++.++++++.+.|.++|+++... ..+
T Consensus 265 -------~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g~~v~~~---~~i 332 (407)
T PRK07179 265 -------ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSELGYNIRSE---SQI 332 (407)
T ss_pred -------HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCE
Confidence 44444433323332 255566777777777776543 35678899999999999999988876532 344
Q ss_pred eeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 389 VLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 389 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+.+.+.. ..+...+.+.|.++||.++....|+. +...+.|||+++..+| ++|+++++++|.+++..
T Consensus 333 ~~l~~~~-~~~~~~~~~~L~~~GI~~~~~~~p~~--~~~~~~lRis~~~~~t----~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 333 IALETGS-ERNTEVLRDALEERNVFGAVFCAPAT--PKNRNLIRLSLNADLT----ASDLDRVLEVCREARDE 398 (407)
T ss_pred EEEEeCC-HHHHHHHHHHHHHCCceEeeecCCCC--CCCCceEEEEECCCCC----HHHHHHHHHHHHHHHHh
Confidence 4444321 12346677888889998642222322 2335789999998888 99999999999998764
No 59
>PRK12414 putative aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=223.58 Aligned_cols=352 Identities=15% Similarity=0.191 Sum_probs=231.7
Q ss_pred hhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010058 57 LEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA 134 (519)
Q Consensus 57 l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~ 134 (519)
++.+.+.+...+... ..+.+.|+|..+++. +++.+.+++.+.+.... ..|+...+...+++.++++++++
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~~~ 82 (384)
T PRK12414 11 LPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-------NQYAPMAGIAALREALAEKTERL 82 (384)
T ss_pred cccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-------CCcCCCCCcHHHHHHHHHHHHHH
Confidence 334445555555443 344567999887774 47888998887765421 23455566778888888999999
Q ss_pred cCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCC
Q 010058 135 FQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYID 213 (519)
Q Consensus 135 ~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD 213 (519)
+|++.+. ..+|++|+|++ ++..++.++++|||+|++++++|.++.. .+...|..+..+ +++++++.+|
T Consensus 83 ~g~~~~~-~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v--~~~~~~~~~d 151 (384)
T PRK12414 83 YGARYDP-ASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAP--------IVRLQGATPVAI--KLSPEDFRVN 151 (384)
T ss_pred hCCCCCC-CCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHcCCEEEEE--ecCccccccC
Confidence 9985211 02588999987 8877899999999999999977755432 222345444444 4554567899
Q ss_pred HHHHHHHhhhhCCcEEEEc-ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC------CCCeEE
Q 010058 214 YEQLEKSAALFRPKLIVAG-ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF------EYADVV 282 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~-~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~------~~~di~ 282 (519)
++++++.+++ ++++|+++ ++| +|... ++++|.++|+++|+++|+|+++..- ...+....++ ....++
T Consensus 152 ~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~-~~~~~~~~~~~~~~~~~~~~i~ 229 (384)
T PRK12414 152 WDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHV-VFDGARHHSMARHRELAERSVI 229 (384)
T ss_pred HHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhc-cCCCCCccCcccCcCccCcEEE
Confidence 9999999876 89999988 666 78654 5778888999999999999996532 2211111111 123588
Q ss_pred EEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHH
Q 010058 283 TTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQ 360 (519)
Q Consensus 283 ~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~ 360 (519)
+.|++|.+ +|.|.||+++++ ++.+.+......... +.+.....++..++.. ...+.+..+.
T Consensus 230 ~~SfSK~~~~pGlRiG~~v~~~--------------~l~~~l~~~~~~~~~-~~s~~~q~a~~~~l~~--~~~~~~~~~~ 292 (384)
T PRK12414 230 VSSFGKSYHVTGWRVGYCLAPA--------------ELMDEIRKVHQFMVF-SADTPMQHAFAEALAE--PASYLGLGAF 292 (384)
T ss_pred EecccccccCccceEEEEecCH--------------HHHHHHHHHHhheec-CCCcHHHHHHHHHhcC--ChHHHHHHHH
Confidence 89999976 688889999987 444444332211111 2233333333444432 1234567788
Q ss_pred HHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC-C-CcHHHHHHhhcccCeEEcccccCCCC-C--CCCCCeEEecc
Q 010058 361 VLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK-G-IDGSRVEKVLESVHIAANKNTVPGDV-S--AMVPGGIRMGT 435 (519)
Q Consensus 361 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~~~L~~~gI~v~~~~~p~~~-~--~~~~~~iRi~~ 435 (519)
++++++.+.+.|++.|+.+..+ ..+.+.|+.+... + .+.+.+.+.|.++||.+. ||+. + ....++|||++
T Consensus 293 ~~~~r~~l~~~L~~~g~~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~----pg~~f~~~~~~~~~iRis~ 367 (384)
T PRK12414 293 YQRKRDLLARELAGSRFELLPS-EGSFFMLARFRHFSDESDSDFVLRLIRDARVATI----PLSAFYTDGTDTGLIRLSF 367 (384)
T ss_pred HHHHHHHHHHHHHhCCCeecCC-CcceEEEEcccccCCCCHHHHHHHHHHhCCEEEe----cchhhcCCCCCCCEEEEEe
Confidence 8999999999999988876543 3355566666431 2 234445577888999996 6553 2 12257899998
Q ss_pred CccccCCCCHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~ 457 (519)
.. + ++++++.++.|.+
T Consensus 368 ~~--~----~~~~~~~~~rl~~ 383 (384)
T PRK12414 368 SK--D----DATLVEGARRLCS 383 (384)
T ss_pred cC--C----HHHHHHHHHHHhh
Confidence 73 3 6777777776653
No 60
>PRK09082 methionine aminotransferase; Validated
Probab=99.94 E-value=1e-24 Score=224.91 Aligned_cols=355 Identities=14% Similarity=0.122 Sum_probs=236.2
Q ss_pred hhhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 010058 56 PLEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133 (519)
Q Consensus 56 ~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~ 133 (519)
++..+...++..+....+ ..+.|+|..+++. +++.+.+++.+.+.+.. ..|+...+...+++...+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~~a~~l~~ 82 (386)
T PRK09082 11 KLPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-------NQYPPMTGVAALREAIAAKTAR 82 (386)
T ss_pred HhhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCcHHHHHHHHHHHHH
Confidence 344455556555554332 2355888876654 46788999888775422 1234445567788888899999
Q ss_pred HcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCC
Q 010058 134 AFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYI 212 (519)
Q Consensus 134 ~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~i 212 (519)
++|.+.+.- .+|.+|+|++ ++..++.++++|||+|++.++.|+++.. .+...|..+..+ +.+.+++.+
T Consensus 83 ~~~~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~~~~~~--~~~~~~~~~ 151 (386)
T PRK09082 83 LYGRQYDAD-SEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGGRAVRV--ALQPPDFRV 151 (386)
T ss_pred HhCCCCCCC-CcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEE--ecCcccccC
Confidence 989854210 1599999987 8888899999999999999977776543 223345444444 445456889
Q ss_pred CHHHHHHHhhhhCCcEEEEc-ccc-cccc---ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC-----CCCCeEE
Q 010058 213 DYEQLEKSAALFRPKLIVAG-ASA-YARL---YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP-----FEYADVV 282 (519)
Q Consensus 213 D~d~l~~~i~~~k~klIi~~-~sn-~g~~---~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p-----~~~~di~ 282 (519)
|++++++.+++ ++++|+++ ++| +|.. .++++|.++|+++|+++|+|+++..........++. .....++
T Consensus 152 d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~ 230 (386)
T PRK09082 152 DWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFV 230 (386)
T ss_pred CHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEE
Confidence 99999999886 89999887 666 7755 467888999999999999999964322211111111 1134588
Q ss_pred EEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHH
Q 010058 283 TTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQ 360 (519)
Q Consensus 283 ~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~ 360 (519)
+.|++|.+ +|.|.||+++++ ++.+.+........ .+++.....+++..+.. ....+++.++.
T Consensus 231 ~~S~SK~~~~~G~RiG~iv~~~--------------~l~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~-~~~~~~~~~~~ 294 (386)
T PRK09082 231 VSSFGKTYHVTGWKVGYCVAPA--------------ALSAEFRKVHQYNT-FTVNTPAQLALADYLRA-EPEHYLELPAF 294 (386)
T ss_pred EeechhhccchhhhhhhhhCCH--------------HHHHHHHHHHhhhc-CCCChHHHHHHHHHHhC-ChHHHHHHHHH
Confidence 88999987 688889999987 45544433221111 12233333334444432 23445778888
Q ss_pred HHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccC-CCCcHHHHHHhh-cccCeEEcccccCCCC---CCCCCCeEEecc
Q 010058 361 VLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRN-KGIDGSRVEKVL-ESVHIAANKNTVPGDV---SAMVPGGIRMGT 435 (519)
Q Consensus 361 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~L-~~~gI~v~~~~~p~~~---~~~~~~~iRi~~ 435 (519)
+.++++.+.+.|++.|+.+..+ ..+.++|+++.. .+.+..++.+.| +++||.+. ||.. .+...+++||++
T Consensus 295 ~~~~~~~~~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~----pg~~f~~~~~~~~~~Ri~~ 369 (386)
T PRK09082 295 YQAKRDRFRAALANSRFKLLPC-EGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAI----PLSVFYADPFPHRLVRLCF 369 (386)
T ss_pred HHHHHHHHHHHHHhCCCcccCC-CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEe----CcHHhCCCCCCCCEEEEEe
Confidence 8999999999999988876543 335566777753 355677787754 78899997 5543 133457899998
Q ss_pred CccccCCCCHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~ 457 (519)
.. + ++++++.++.|.+
T Consensus 370 ~~--~----~~~l~~~~~rl~~ 385 (386)
T PRK09082 370 AK--Q----EETLDAAAERLCQ 385 (386)
T ss_pred cC--C----HHHHHHHHHHHhh
Confidence 63 3 6778777777654
No 61
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.6e-24 Score=220.73 Aligned_cols=359 Identities=12% Similarity=0.066 Sum_probs=233.1
Q ss_pred hhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHH
Q 010058 52 QLNAPLEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 129 (519)
Q Consensus 52 ~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~ 129 (519)
++++.+......+...+.+......+.++|..+++. +++.+.+++.+.+.+.. ..|+...+...+++.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~ 77 (384)
T PRK06348 5 FLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-------TRYTDSGGDVELIEEIIK 77 (384)
T ss_pred HHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHH
Confidence 445555555666655555543333456888877664 35667665555443311 234555666778888888
Q ss_pred HHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC
Q 010058 130 RALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES 208 (519)
Q Consensus 130 ~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~ 208 (519)
++.+.+|...+. .+|++|+|++ ++..++.++++|||+|++.++.+.++... +...|..+..+++. +.+
T Consensus 78 ~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~--------~~~~g~~~~~~~~~-~~~ 146 (384)
T PRK06348 78 YYSKNYDLSFKR--NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQ--------IEMVGGKPIILETY-EED 146 (384)
T ss_pred HHHHHhCCCCCh--hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHH--------HHHcCCEEEEecCC-cCc
Confidence 887777663322 4699999998 88889999999999999999777666542 22334444444321 224
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CC---CC
Q 010058 209 TGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PF---EY 278 (519)
Q Consensus 209 ~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~---~~ 278 (519)
++.+|++++++.+++ ++++|+++ ++| +|...+ +++|.++|+++|+++|+|+++.. +...+.... .+ ..
T Consensus 147 ~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~ 224 (384)
T PRK06348 147 GFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDG-FSFYEDFVPMATLAGMPE 224 (384)
T ss_pred CCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEeccccc-ceeCCCccchhhcCCCcC
Confidence 567999999998876 89999888 777 787765 67788889999999999999643 222211110 01 12
Q ss_pred CeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 279 ADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 279 ~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
..+++.|++|++ +|.|.||+++++ ++.+.+.........+ ++.....++..++... +...++
T Consensus 225 ~vi~~~SfSK~~~l~GlRiG~~v~~~--------------~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~~-~~~~~~ 288 (384)
T PRK06348 225 RTITFGSFSKDFAMTGWRIGYVIAPD--------------YIIETAKIINEGICFS-APTISQRAAIYALKHR-DTIVPL 288 (384)
T ss_pred cEEEEecchhccCCccccceeeecCH--------------HHHHHHHHHHHhccCC-CCHHHHHHHHHHHhCc-HHHHHH
Confidence 457888999976 688999999987 5555544332211112 2333444444455432 223467
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEe
Q 010058 357 YQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRM 433 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi 433 (519)
.++.++++++.+.+.|.+. |+.+..+ ..+.+.|+.+...+++..++.+.| +++||.+. ||.. +....++||+
T Consensus 289 ~~~~~~~r~~~~~~~L~~~~~~~~~~p-~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRi 363 (384)
T PRK06348 289 IKEEFQKRLEYAYKRIESIPNLSLHPP-KGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVI----PGKAFGESGEGYIRL 363 (384)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceeccC-CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEc----CchhhccCCCCeEEE
Confidence 7778888899999999887 6655433 335566777654456777777765 57899996 6654 3334579999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
++. .+ +++++..++.|.+
T Consensus 364 ~~~--~~----~~~l~~al~~l~~ 381 (384)
T PRK06348 364 ACT--VG----IEVLEEAFNRIEK 381 (384)
T ss_pred Eec--CC----HHHHHHHHHHHHh
Confidence 974 24 6777777776654
No 62
>PRK08912 hypothetical protein; Provisional
Probab=99.94 E-value=3e-24 Score=221.63 Aligned_cols=360 Identities=14% Similarity=0.114 Sum_probs=237.0
Q ss_pred hhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 010058 53 LNAPLEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 130 (519)
Q Consensus 53 ~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~ 130 (519)
+++++....+.++..+.+.... ...++|..+.+. .|+.+.+++.+.+.+.. ..|+...+..++++...++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~ 75 (387)
T PRK08912 4 GNPVFADLPTTIFEVMSQLARE-HGAINLGQGFPDDPGPEDVRRAAADALLDGS-------NQYPPMMGLPELRQAVAAH 75 (387)
T ss_pred hhHHHhhCCCCHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHH
Confidence 3445555666666655554332 356788755442 46778887777654421 2245556667888888888
Q ss_pred HHHHcCCCCCCCcc-eEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC
Q 010058 131 ALDAFQLDPAKWGV-NVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES 208 (519)
Q Consensus 131 ~~~~~g~~~~~~~~-~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~ 208 (519)
+.+.+|.+.+. . +|++|+|++ ++..++.++++|||+|+++++.|+.+.. .+...|..+..++ ++++
T Consensus 76 ~~~~~g~~~~~--~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~ 143 (387)
T PRK08912 76 YARFQGLDLDP--ETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP--------LIRRAGGVPRLVR--LEPP 143 (387)
T ss_pred HHHHhCCCCCC--cccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEe--cCcc
Confidence 88888864322 2 699999988 8888889999999999999977766543 2233455544444 4445
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC-----CCCC
Q 010058 209 TGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS-----PFEY 278 (519)
Q Consensus 209 ~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~-----p~~~ 278 (519)
++.+|++++++.+.. ++|+|+++ ++| +|...+ +++|.++|+++++++|+|+++............ ....
T Consensus 144 ~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 222 (387)
T PRK08912 144 HWRLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRE 222 (387)
T ss_pred cCcCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccC
Confidence 678999999998876 88998888 777 887776 667888899999999999997532221101110 0113
Q ss_pred CeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 279 ADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 279 ~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
.++++.|++|.+ +|.|.||+++++ ++.+.+.........+.+. ....++..++.. ....+++
T Consensus 223 ~~i~~~S~SK~~g~~GlRiG~~~~~~--------------~~~~~l~~~~~~~~~~~~~-~~q~~~~~~l~~-~~~~~~~ 286 (387)
T PRK08912 223 RTVKIGSAGKIFSLTGWKVGFVCAAP--------------PLLRVLAKAHQFLTFTTPP-NLQAAVAYGLGK-PDDYFEG 286 (387)
T ss_pred ceEEEeechhhccCcCceeEEEecCH--------------HHHHHHHHHHhhccccCCh-HHHHHHHHHHhC-CHHHHHH
Confidence 578999999975 678889999987 4444443322111112222 223333444432 1233477
Q ss_pred HHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC--CCcHHHHHHhh-cccCeEEcccccCCCC-C--CCCCCe
Q 010058 357 YQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK--GIDGSRVEKVL-ESVHIAANKNTVPGDV-S--AMVPGG 430 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~--~~~~~~ 430 (519)
..+++.++++.+.+.|++.|+.+..+ ..++++|+.+.+. ..+..++.+.| ++.||.+. |+.. . ....++
T Consensus 287 ~~~~~~~~~~~l~~~L~~~g~~~~~~-~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~----pg~~f~~~~~~~~~ 361 (387)
T PRK08912 287 MRADLARSRDRLAAGLRRIGFPVLPS-QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAI----PVSAFYEEDPVTSV 361 (387)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCC-CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEe----cchhhCCCCCCCCE
Confidence 88889999999999999998876553 3455667777542 24566676665 67899996 5443 1 123578
Q ss_pred EEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 431 iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+||++.. . ++++++.++.|.+.+.
T Consensus 362 iRl~~~~--~----~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 362 VRFCFAK--R----DATLDEAVERLAAARR 385 (387)
T ss_pred EEEEEeC--C----HHHHHHHHHHHHHHHh
Confidence 9999874 3 6788888888877664
No 63
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.94 E-value=8.3e-25 Score=243.49 Aligned_cols=369 Identities=16% Similarity=0.109 Sum_probs=248.3
Q ss_pred cCeeec-CCCCCCcH-HHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELI-PSENFTSV-SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~-a~en~~~~-~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.+.|. ++..++++ .|.+++...+.+.+ ++|+..+..+ .....+.+.+|+.+++++|+++++ ..|++|+|++
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s-~~~~~~~e~aR~~ia~~lga~~~~--~~VvFtsnaT~ 108 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVY--GNPHSQSDSS-MRSSDTIESARQQVLEYFNAPPSD--YACVFTSGATA 108 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchh-hhHHHHHHHHHHHHHHHhCCCccc--eEEEEeCChHH
Confidence 356665 34455555 55555555555534 5666433333 334445568899999999997653 2589999988
Q ss_pred HHHHHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-----CCCCCCH--HHHHHHhh---
Q 010058 154 ANFQVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-----STGYIDY--EQLEKSAA--- 222 (519)
Q Consensus 154 a~~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-----~~~~iD~--d~l~~~i~--- 222 (519)
++..+..++ +++||+|++...+|.+.+.+...... .|..++.++.+.+. +.+.+|. +++++.++
T Consensus 109 alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~-----~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l 183 (805)
T PLN02724 109 ALKLVGETFPWSSESHFCYTLENHNSVLGIREYALE-----KGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKL 183 (805)
T ss_pred HHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHH-----cCCeEEeccchhccccccccccccccchhhhhhhhhhhh
Confidence 766677777 88999999998899887743321111 24445555543111 2234443 66766532
Q ss_pred ------hhCCcEEEEc-ccc-ccccccHHHHHHHHhhc--------CCEEEehhhhhhhccccCCCCCCCCCCeEEEEcC
Q 010058 223 ------LFRPKLIVAG-ASA-YARLYDYARIRKVCDKQ--------KAVMLADMAHISGLVAAGVIPSPFEYADVVTTTT 286 (519)
Q Consensus 223 ------~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~--------~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~ 286 (519)
..++++|++. .+| +|...|++.+..+++.. ++++++|+||+.|..+.++... ++|++++|+
T Consensus 184 ~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~---~~Dfl~~S~ 260 (805)
T PLN02724 184 QKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRY---PADFVVVSF 260 (805)
T ss_pred ccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhc---CCCEEEEec
Confidence 1256898888 666 89999999876666532 3689999999999999888766 799999999
Q ss_pred CCcccCCCc-ceEEeeccc--cccc-ccCc-chhhhHHH-----HhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 287 HKSLRGPRG-AMIFFRKGV--KEIN-KQGQ-EVMYAYED-----KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 287 ~K~l~Gprg-G~i~~~~~~--~~~~-~~g~-~~~~~~~~-----~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
||+++||.| |+++++++. .+.| ..|+ +..+.... ...........||++...++++.+|++++...+++.
T Consensus 261 HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~ 340 (805)
T PLN02724 261 YKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISA 340 (805)
T ss_pred ceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHH
Confidence 999988998 999999864 3455 4443 32111000 000000011248999999999999999998878899
Q ss_pred HHHHHHHHHHHHHHHHHhc-------CCEEecCCC-----CcceeeeeccCCC-----CcHHHHHHhhcccCeEEcccc-
Q 010058 357 YQEQVLSNSSKFARSLLER-------GYDLVSGGT-----ENHLVLVNLRNKG-----IDGSRVEKVLESVHIAANKNT- 418 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~-------g~~~~~~~~-----~~~~~~v~~~~~~-----~~~~~~~~~L~~~gI~v~~~~- 418 (519)
+.++..++++++.+.|.++ ++.++.+.. ..+..++.+...+ +...++..++.+.||.++...
T Consensus 341 I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~ 420 (805)
T PLN02724 341 IAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCF 420 (805)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccc
Confidence 9999999999999999987 366665321 1234455444333 334556777788999998632
Q ss_pred c-CCCC-C---------------------------CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 419 V-PGDV-S---------------------------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 419 ~-p~~~-~---------------------------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
| |+.. . ....+.||+|++.++| ++|+++++++|++.....
T Consensus 421 Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt----~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 421 CNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMST----FEDCQKFIDFIISSFVST 489 (805)
T ss_pred cCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCC----HHHHHHHHHHHHHHhhcC
Confidence 1 1110 0 0123789999999999 999999999999977543
No 64
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.94 E-value=8.8e-25 Score=226.48 Aligned_cols=335 Identities=18% Similarity=0.203 Sum_probs=226.1
Q ss_pred cCeeecCCC--CC-CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 77 KGLELIPSE--NF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 77 ~~i~L~a~e--n~-~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
+.|+|..++ .+ +++.+.+++.+.+.. +..++++.++..|. ..+++..++++++++|.+. +|.+++|++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~---~~l~~~l~~~la~~~g~~~-----~i~~tsG~~ 113 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRFICGT---QDLHKELEEKLAKFLGTED-----AILYSSCFD 113 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccccccCC---cHHHHHHHHHHHHHhCCCc-----EEEEcChHH
Confidence 457777554 22 588999999988765 32244444333332 3455566699999999752 599999987
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh---h--CCcE
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL---F--RPKL 228 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~---~--k~kl 228 (519)
++..++.++++|||+|++.++.|.++... +...|.....++ ..|++++++.+++ . ++++
T Consensus 114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~~--------~~~~~~~~~~~~--------~~d~~~l~~~i~~~~~~~~~~~~ 177 (397)
T PRK06939 114 ANGGLFETLLGKEDAIISDALNHASIIDG--------VRLCKAKRYRYA--------NNDMADLEAQLKEAKEAGARHKL 177 (397)
T ss_pred HHHHHHHHhCCCCCEEEEEhhhhHHHHHH--------HHhcCCceEEeC--------CCCHHHHHHHHHhhhccCCCCeE
Confidence 88889999999999999999887765432 222333322221 1588888888764 2 6777
Q ss_pred EEEc--cccccccccHHHHHHHHhhcCCEEEehhhhhhhcccc-CC--C--CCCCCCCeEEEEcCCCcccCCCcceEEee
Q 010058 229 IVAG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAA-GV--I--PSPFEYADVVTTTTHKSLRGPRGAMIFFR 301 (519)
Q Consensus 229 Ii~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~-~~--~--~~p~~~~di~~~S~~K~l~GprgG~i~~~ 301 (519)
|+.+ .+.+|...++++|.++|+++|+++|+|++|..|.... +. . ....+.+|++++|+||+++|+|+||++++
T Consensus 178 v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~ 257 (397)
T PRK06939 178 IATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGR 257 (397)
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeC
Confidence 7776 2337888899999999999999999999986654322 10 0 01112468999999999988999999998
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCC-CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEe
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQ-GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLV 380 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~-g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 380 (519)
+ ++.+.+.....+... +++.....+++.++++.+.. .++.++++.++++.+.+.|.+.|+.+.
T Consensus 258 ~--------------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~ 321 (397)
T PRK06939 258 K--------------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEE--SDELRDRLWENARYFREGMTAAGFTLG 321 (397)
T ss_pred H--------------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 7 455554433222222 33344445555566766532 357788999999999999999887765
Q ss_pred cCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 381 SGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 381 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.+ ...++.+.+. .+.+..++.+.|.+.||.+.....|. .+...++||++++..++ ++|++++++.|.++++
T Consensus 322 ~~--~~~~~~~~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~--~~~~~~~iRi~~~~~~~----~~~i~~~l~~L~~~~~ 392 (397)
T PRK06939 322 PG--EHPIIPVMLG-DAKLAQEFADRLLEEGVYVIGFSFPV--VPKGQARIRTQMSAAHT----KEQLDRAIDAFEKVGK 392 (397)
T ss_pred CC--CCCEEEEEEC-CHHHHHHHHHHHHHCCceEeeeCCCC--CCCCCceEEEEECCCCC----HHHHHHHHHHHHHHHH
Confidence 42 2223333322 12345677787877799986322111 12234689999888777 8999999999998876
Q ss_pred H
Q 010058 461 L 461 (519)
Q Consensus 461 ~ 461 (519)
.
T Consensus 393 ~ 393 (397)
T PRK06939 393 E 393 (397)
T ss_pred H
Confidence 4
No 65
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=5e-25 Score=225.84 Aligned_cols=331 Identities=17% Similarity=0.201 Sum_probs=210.0
Q ss_pred cCeeecC--CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCch--hHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 77 KGLELIP--SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNE--YIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a--~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~--~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
..|+|.+ ..+.+...+.+++.+. ..|+.+.|.-+|.. .........++.+++++|++. +.+++|+
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~------~~i~~g~ 75 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVEF-----GDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDE------ARVTHGA 75 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHHH-----hhccccccccccccccccchHHHHHHHHHHHHhCCCc------eEEECCh
Confidence 4566654 3345666777776654 33444444433221 111111223377999999986 3335555
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh------hC
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL------FR 225 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~------~k 225 (519)
+ ++..++.++++|||.|++..++|.+.+. .+...|..+..++..- .+++.+|++++++.+++ .+
T Consensus 76 ~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~--------~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~ 146 (370)
T TIGR02539 76 REGKFAVMHALCKEGDWVVLDGLAHYTSYV--------AAERAGLNVKEVPHTG-HPEYKVDPEGYGEVIEEVEDESGKP 146 (370)
T ss_pred HHHHHHHHHHhhCCCCEEEECCcccHHHHH--------HHHHcCCEEEEEecCC-cccCCcCHHHHHHHHHHhhhccCCC
Confidence 5 9898999999999999998777655432 2334566566655321 23578999999999864 26
Q ss_pred CcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccC-CCcceEEeec
Q 010058 226 PKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG-PRGAMIFFRK 302 (519)
Q Consensus 226 ~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~G-prgG~i~~~~ 302 (519)
+++|+++ ++| +|...|+++|.++|+++|+++++|++|..|......... ++|+++.|+||++++ ++.|++++++
T Consensus 147 ~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~---~~di~v~s~sK~~~~~g~~G~l~~~~ 223 (370)
T TIGR02539 147 PVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEI---GADFIVGSGHKSMAASGPCGVLGMSE 223 (370)
T ss_pred cEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEECH
Confidence 7888887 555 899999999999999999999999999887433222222 579999999999864 3349999987
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCC-------CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGL-------QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~-------~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
++.+.+.....|.. .++.......++.+++.... ...+.+ .+..+++++|.+.|+++
T Consensus 224 --------------~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~l~~~-~~~~~~~~~l~~~L~~~ 287 (370)
T TIGR02539 224 --------------EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVV-ERVKRW-DEEVKKTRWFVAELEDI 287 (370)
T ss_pred --------------HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHhC
Confidence 44444333222111 12222223333344454321 122333 33445567899999999
Q ss_pred CCEEecC-CCCcceeeeeccCC-------CCcHHHHHHhhcccCeE-EcccccCCCCCCCCCCeEEeccCccccCCCCHH
Q 010058 376 GYDLVSG-GTENHLVLVNLRNK-------GIDGSRVEKVLESVHIA-ANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 376 g~~~~~~-~~~~~~~~v~~~~~-------~~~~~~~~~~L~~~gI~-v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
|+.++.. ++..+++++++... ..+...+.+.|.+.||. ++ |+ .++.||+++.. .+ ++
T Consensus 288 g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir----~~-----~~~~iRis~~~-~t----~e 353 (370)
T TIGR02539 288 GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR----SG-----QTKYFKLSVYG-LT----KE 353 (370)
T ss_pred CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc----CC-----cceEEEEEecC-CC----HH
Confidence 9987532 34456666664311 11234688889889997 54 22 13589999743 34 79
Q ss_pred HHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVK 460 (519)
Q Consensus 447 di~~l~~~l~~~l~ 460 (519)
|++++++.|+++++
T Consensus 354 ~i~~l~~~L~~~~~ 367 (370)
T TIGR02539 354 QVEYVVDSFEEIVE 367 (370)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998765
No 66
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.8e-24 Score=222.85 Aligned_cols=341 Identities=12% Similarity=0.077 Sum_probs=228.0
Q ss_pred cccCeeecCCC-C--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeC
Q 010058 75 QWKGLELIPSE-N--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSL 149 (519)
Q Consensus 75 ~~~~i~L~a~e-n--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~ 149 (519)
..+.++|..++ + .+++.+.+++.+.+.+....+ |+...+...+++.+.+++++.+|. ++++ +|++|
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~------Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~---~I~it 108 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQA------YTEYRGDADIRELLAARLAAFTGAPVDAAD---ELIIT 108 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCcc------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---CEEEe
Confidence 34567887544 3 356788888888775421112 344455677888888999999996 3412 59999
Q ss_pred CcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeee--CCCCCCCCHHHHHHHhhhhCC
Q 010058 150 SGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL--DESTGYIDYEQLEKSAALFRP 226 (519)
Q Consensus 150 sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~--d~~~~~iD~d~l~~~i~~~k~ 226 (519)
+|++ ++..++.++++|||+|++.++.|.++.. .+...|..+..++++. ..+++.+|+++|++++.+ ++
T Consensus 109 ~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~ 179 (405)
T PRK06207 109 PGTQGALFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA-GV 179 (405)
T ss_pred CCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh-cC
Confidence 9998 8888999999999999999977766543 2333455554554321 113578999999998877 78
Q ss_pred cEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCC--CC---CCeEEEEcCCCcc--cCC
Q 010058 227 KLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSP--FE---YADVVTTTTHKSL--RGP 293 (519)
Q Consensus 227 klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p--~~---~~di~~~S~~K~l--~Gp 293 (519)
++|+++ |+| +|..++ +++|.++|+++|++||+|+++.. +...+. .+.. +. ..-+++.|++|++ +|.
T Consensus 180 k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~-~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGl 258 (405)
T PRK06207 180 RVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSR-LLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGY 258 (405)
T ss_pred eEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccc-cccCCCCCCchhcCCCCcCcEEEEecchhhccCccc
Confidence 988777 777 888776 66788889999999999998643 222111 1111 11 2237888999986 699
Q ss_pred CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 010058 294 RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 294 rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (519)
|.||+++++ ++.+++.........+ .+.....++..+++.- ...+++..+++.++++.+.+.|+
T Consensus 259 RiG~ii~~~--------------~l~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~ 322 (405)
T PRK06207 259 RLGVAFGSP--------------AIIDRMEKLQAIVSLR-AAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLR 322 (405)
T ss_pred ceEEEEcCH--------------HHHHHHHHHHhHhccC-CCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999887 4555444322111112 2223334444444321 12357777888888999999998
Q ss_pred hc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 374 ER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 374 ~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
+. |+.+..+ ..+.++|+++...+.+..++.+.|. ++||.+. ||.. +...++++||++.. + ++++++
T Consensus 323 ~~~~~~~~~p-~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~----pG~~F~~~~~~~~Ris~~~--~----~~~l~~ 391 (405)
T PRK06207 323 GVEGVFVRAP-QAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVT----PGTEFSPHTADSIRLNFSQ--D----HAAAVA 391 (405)
T ss_pred cCCCceecCC-CeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEe----CchHhCCCCCCeEEEEecC--C----HHHHHH
Confidence 87 7776543 3356778887543456677777774 7899996 6654 33346789999874 3 688888
Q ss_pred HHHHHHHHHHH
Q 010058 451 VAEFFDAAVKL 461 (519)
Q Consensus 451 l~~~l~~~l~~ 461 (519)
.++.|.++++.
T Consensus 392 al~rl~~~l~~ 402 (405)
T PRK06207 392 AAERIAQLIER 402 (405)
T ss_pred HHHHHHHHHHH
Confidence 88888877753
No 67
>PLN02483 serine palmitoyltransferase
Probab=99.94 E-value=3.1e-25 Score=233.91 Aligned_cols=371 Identities=19% Similarity=0.179 Sum_probs=238.4
Q ss_pred hhhhcccCCCchhhhhhhhhhhcCHHHHHHHHHHHH----------hcccCeeecCCCCCC-----cHHHHHHHhhHhhh
Q 010058 38 QALNNEKAPAPWINQLNAPLEEIDPEIADIIELEKA----------RQWKGLELIPSENFT-----SVSVMQAVGSVMTN 102 (519)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~----------~~~~~i~L~a~en~~-----~~~V~ea~~~~l~~ 102 (519)
++||++|.+.+..+-+++++...+...+..+++... ..++.|+|. |.|++ ++.+.+++.+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~-s~~YLgl~~~~~~~~~~~~~ai~~ 130 (489)
T PLN02483 52 EDFYIRRLYLRIQDCFNRPIASAPDAWFDVVERVSNDNNKTLKRTTKTRRCLNLG-SYNYLGFAAADEYCTPRVIESLKK 130 (489)
T ss_pred HHHHHHHhhhhcccccCCCCCCCCCCeEEEEEeecCCCCceEEecCCCceEEEee-cCCccCcCCCCHHHHHHHHHHHHH
Confidence 678888888877776666666555444433332111 112335553 44442 23344444444433
Q ss_pred ccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCccccc
Q 010058 103 KYSEGYPGARY-YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLS 181 (519)
Q Consensus 103 ~~~~g~p~~~~-y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~ 181 (519)
|.-+..+.|. |+......++| +.+++++|.+. .|.+++|..+|.+++.++++|||.|++.++.|.+...
T Consensus 131 -~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~ 200 (489)
T PLN02483 131 -YSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVN 200 (489)
T ss_pred -hCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH
Confidence 4334445553 55566677777 88889999654 5999999998988899999999999999988887654
Q ss_pred ccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh------hCC-----cEEEEc---cccccccccHHHHHH
Q 010058 182 HGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL------FRP-----KLIVAG---ASAYARLYDYARIRK 247 (519)
Q Consensus 182 ~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~------~k~-----klIi~~---~sn~g~~~d~~~i~~ 247 (519)
.+...|..++.++ .+ |.+++++.+.+ .++ ++++++ .+..|...++++|.+
T Consensus 201 --------~~~~~Ga~v~~~~--~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~ 264 (489)
T PLN02483 201 --------GARGSGATIRVFQ--HN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVA 264 (489)
T ss_pred --------HHHHcCCeEEEEe--CC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHH
Confidence 2334565555443 22 45556554432 122 545554 233688899999999
Q ss_pred HHhhcCCEEEehhhhhhhcccc---------CCCCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhH
Q 010058 248 VCDKQKAVMLADMAHISGLVAA---------GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAY 318 (519)
Q Consensus 248 ia~~~~~~livD~ah~~g~~~~---------~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~ 318 (519)
+|+++|+++|+|++|..|.... ++.+ ..+|++++|++|++ |+.||++++++ ++
T Consensus 265 la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~---~~~dI~~~SfSKs~-g~~GG~i~~~~--------------~l 326 (489)
T PLN02483 265 VCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDP---ADVDIMMGTFTKSF-GSCGGYIAGSK--------------EL 326 (489)
T ss_pred HHHHcCCEEEEECcCccCccCCCCCchHHhcCCCc---ccCcEEEEecchhc-ccCceEEEcCH--------------HH
Confidence 9999999999999997654321 1111 26799999999998 45789999887 55
Q ss_pred HHHhhhcccCCCC-CCccHHHHHHHHHHHHHhcC----HhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeec
Q 010058 319 EDKINQAVFPGLQ-GGPHNHTISGLAVALKQVKT----PEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNL 393 (519)
Q Consensus 319 ~~~i~~~~~~~~~-g~~~~~~iaal~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~ 393 (519)
.+.+......... ++.+....++..++++.+.. ....+..++++++++++.+.|+++|+.+..+ .+....++.+
T Consensus 327 i~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~-~~sp~~~l~l 405 (489)
T PLN02483 327 IQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGD-NDSPVMPIML 405 (489)
T ss_pred HHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCCEEEEEE
Confidence 5555443222111 23344444455566765431 1235567889999999999999999876543 2223333322
Q ss_pred cCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 394 RNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 394 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.. ..+..++.+.|.+.||.+.....|. .+...+.+|++++..++ ++|++++++.|+++++.
T Consensus 406 ~~-~~~~~~~~~~Ll~~GI~v~~~~fp~--~p~~~~~vRi~isa~~t----~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 406 YN-PAKIPAFSRECLKQNVAVVVVGFPA--TPLLLARARICISASHS----REDLIKALEVISEVGDL 466 (489)
T ss_pred CC-HHHHHHHHHHHHHCCcEEeeeCCCC--CCCCCceEEEEeCCCCC----HHHHHHHHHHHHHHHHH
Confidence 21 1134467777777899997322221 23345789999998888 89999999999998764
No 68
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.94 E-value=1.5e-24 Score=221.56 Aligned_cols=329 Identities=18% Similarity=0.170 Sum_probs=221.4
Q ss_pred ccCeeecCCCC---CCcHHHHHHHhhHhhhccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 76 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en---~~~~~V~ea~~~~l~~~~~~g~p~~~~-y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
++.|+|..+++ +.+|.+++++.+.+.+ |..++++.++ ++......+++ +.+++++|.+. +|++++|
T Consensus 16 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~~G 85 (360)
T TIGR00858 16 RRLLNFSSNDYLGLASHPEVIQAAQQGAEQ-YGAGSTASRLVSGNSPLHEELE----EELAEWKGTEA-----ALLFSSG 85 (360)
T ss_pred ceEEecccCCcccCCCCHHHHHHHHHHHHh-cCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCC-----EEEECch
Confidence 35678887753 2468999999988854 5434443332 22223344444 77888888542 5999999
Q ss_pred HHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh---CCcE
Q 010058 152 SPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF---RPKL 228 (519)
Q Consensus 152 s~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~---k~kl 228 (519)
+.++..++.++++|||+|++.++.|++.... +...|..+..++ .+|++++++.+++. ++++
T Consensus 86 ~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~--------~~~~g~~~~~~~--------~~d~~~l~~~~~~~~~~~~~~ 149 (360)
T TIGR00858 86 YLANVGVISALVGKGDLILSDALNHASLIDG--------CRLSGARVRRYR--------HNDVEHLERLLEKNRGERRKL 149 (360)
T ss_pred HHHHHHHHHHhCCCCCEEEEEccccHHHHHH--------HHhcCCceEEec--------CCCHHHHHHHHHHcccCCCeE
Confidence 8877777888899999999998777665432 223343333332 25899999988752 4677
Q ss_pred EEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC---C-CCC--CCCeEEEEcCCCcccCCCcceEEe
Q 010058 229 IVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI---P-SPF--EYADVVTTTTHKSLRGPRGAMIFF 300 (519)
Q Consensus 229 Ii~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~---~-~p~--~~~di~~~S~~K~l~GprgG~i~~ 300 (519)
|+++ ..+ +|...|+++|.++|+++|+++|+|++|..|....... + ..+ ...+++++|+||+++ ++||++++
T Consensus 150 v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~gG~~~~ 228 (360)
T TIGR00858 150 IVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SYGAYVAG 228 (360)
T ss_pred EEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-ccCcEEEc
Confidence 7777 333 6788999999999999999999999987664432100 0 011 156899999999885 47799988
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
++ ++.+.+.....+.. .++.+...+++..++++.... .+...+++.++++++.+.|.++|+.+
T Consensus 229 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~ 292 (360)
T TIGR00858 229 SQ--------------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLEALGFTL 292 (360)
T ss_pred CH--------------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 77 55554433222221 233455556666667765432 35678899999999999999988776
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
..+ ...++++.+.. ..++.++.+.|.++||.+.....++. +...+++|++++.+++ ++|++++++.|+
T Consensus 293 ~~~--~~~~~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~iRis~~~~~~----~~~i~~~l~~l~ 360 (360)
T TIGR00858 293 MPS--CTPIVPVIIGD-NASALALAEELQQQGIFVGAIRPPTV--PAGTSRLRLTLSAAHT----PGDIDRLAEALK 360 (360)
T ss_pred CCC--CCCEEEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCCC--CCCCceEEEEEcCCCC----HHHHHHHHHhhC
Confidence 543 23456665532 23466788888889999973222211 1234689999998888 899999998763
No 69
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.94 E-value=1.2e-24 Score=225.53 Aligned_cols=314 Identities=15% Similarity=0.096 Sum_probs=200.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCC--CCEEEEecCCCcccccccccccCCceeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKP--HERIMALDLPHGGHLSHGYQTDTKKISAV 194 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~p--GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~ 194 (519)
.+..++++.+++++++++|++.++ + +++.+|++ ++.+++.+++.+ ||+|++++..|+++......... ..
T Consensus 60 ~g~~~~~~~~~~~la~~~g~~~~~--v-~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~----~~ 132 (398)
T cd00613 60 QGRLQALFELQTMLCELTGMDVAN--A-SLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGE----PL 132 (398)
T ss_pred hhHHHHHHHHHHHHHHHHCCCccc--e-eccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcc----cC
Confidence 456678888889999999997643 2 34444665 556566666776 99999999888887654332211 11
Q ss_pred eeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-ccccccH-HHHHHHHhhcCCEEEehhhhhhhccccCCC
Q 010058 195 SIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YARLYDY-ARIRKVCDKQKAVMLADMAHISGLVAAGVI 272 (519)
Q Consensus 195 g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~~d~-~~i~~ia~~~~~~livD~ah~~g~~~~~~~ 272 (519)
|..++.+++ + +++.+|++++++++.+ ++++|++++++ +|...|+ ++|+++|+++|+++|+|++|..+.......
T Consensus 133 g~~~~~v~~--~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~ 208 (398)
T cd00613 133 GIEVVEVPS--D-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPG 208 (398)
T ss_pred CcEEEEecc--C-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChH
Confidence 244445543 3 3467899999999987 89999888444 7877885 999999999999999999987655332222
Q ss_pred CCCCCCCeEEEEcCCCcc-----cCCCcceEEeecccc--ccc-ccCcc------hhhh--HHHHhhhccc-CCC--CCC
Q 010058 273 PSPFEYADVVTTTTHKSL-----RGPRGAMIFFRKGVK--EIN-KQGQE------VMYA--YEDKINQAVF-PGL--QGG 333 (519)
Q Consensus 273 ~~p~~~~di~~~S~~K~l-----~GprgG~i~~~~~~~--~~~-~~g~~------~~~~--~~~~i~~~~~-~~~--~g~ 333 (519)
.. ++|++++|+||++ +||++|+++++++.. ..+ ..|.. ..+. +........+ .+. ..+
T Consensus 209 ~~---~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~ 285 (398)
T cd00613 209 EY---GADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT 285 (398)
T ss_pred Hc---CCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccccee
Confidence 22 6899999999997 246778999887431 111 11100 0000 0000000000 010 011
Q ss_pred ccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC-CCcHHHHHHhhcccCe
Q 010058 334 PHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK-GIDGSRVEKVLESVHI 412 (519)
Q Consensus 334 ~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI 412 (519)
......++..+++......+++++.+++.++++++.+.|++++......+...+.+++.+... +.+..++.+.|.+.||
T Consensus 286 ~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi 365 (398)
T cd00613 286 GQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGF 365 (398)
T ss_pred cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCc
Confidence 122233333445555566678889999999999999999998654322222122234444321 3456778888888999
Q ss_pred EEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 413 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 413 ~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
.+.... +...+.||++++.++| ++|++++++.|
T Consensus 366 ~~~~~~------~~~~~~lRis~~~~~t----~edid~~~~~L 398 (398)
T cd00613 366 HAPTMY------LPVDGTLMIEPTETET----KEELDALLEAL 398 (398)
T ss_pred cccccc------cCCCCeEEEEcCCCCC----HHHHHHHHHhC
Confidence 874211 1235789999999999 99999998764
No 70
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.94 E-value=5.4e-24 Score=219.63 Aligned_cols=333 Identities=14% Similarity=0.101 Sum_probs=220.0
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcc-eEEeCCcH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGV-NVQSLSGS 152 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~-~V~~~sGs 152 (519)
.+.++|..+++. +++.+.+++.+.+..... ..|+...+..++++++.+++.+.+|.+.+. . +|++|+|+
T Consensus 31 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~~ii~t~G~ 102 (385)
T PRK09276 31 VDVISLGIGDPDLPTPDHIIEAMCKAVEDPEN------HQYPSYEGMLEFRKAVADWYKRRFGVELDP--ETEVISLIGS 102 (385)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCcHHHHHHHHHHHHHHhCCCCCC--CCcEEEccCc
Confidence 356888877764 477889998887654211 223444556778888888888877864221 2 48999999
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klIi 230 (519)
+ ++..++.++++|||+|+++++.+..+.. .....|..+..+++ +.+ ++.+|++++++.+.+ ++++|+
T Consensus 103 ~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~--------~~~~~g~~~~~v~~--~~~~g~~~d~~~l~~~~~~-~~~~v~ 171 (385)
T PRK09276 103 KEGIAHIPLAFVNPGDVVLVPDPGYPVYKI--------GTIFAGGEPYFMPL--KEENGFLPDLDAIPEDVAK-KAKLMF 171 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcChHH--------HHHHcCCEEEEEec--CCCCCCcCCHHHHHHhccc-cceEEE
Confidence 8 8777888899999999999977655432 22344555555554 333 467899999988876 899999
Q ss_pred Ec-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCC---C---CCCeEEEEcCCCcc--cCCCcce
Q 010058 231 AG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP---F---EYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 231 ~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p---~---~~~di~~~S~~K~l--~GprgG~ 297 (519)
++ |+| +|...+. ++|.++|+++|+++|+|+++..... .+....+ + ....+++.|++|.+ +|.|.||
T Consensus 172 l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 250 (385)
T PRK09276 172 INYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAY-DGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGF 250 (385)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheec-CCCCCCChhccCCCcCCEEEEecchhhcCCcchhhee
Confidence 98 777 8877774 7778888999999999999753222 1111111 1 12357788999976 6788899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY 377 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 377 (519)
+++++ ++.+.+....... ..+.+.....++..++... ....++.++++.++++.+.+.|++.|+
T Consensus 251 ~i~~~--------------~l~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 314 (385)
T PRK09276 251 AVGNA--------------DLIAGLGKVKSNV-DSGVFQAIQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRKLGL 314 (385)
T ss_pred eeCCH--------------HHHHHHHHHHhhc-cCCCCHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99887 4454443322111 1222333333344444321 234577788889999999999999888
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
.+..+ ..+.++|+.+.. +++..++.+.| +++||.+. ||.. +...++++||++. .+ ++++...++.|
T Consensus 315 ~~~~~-~~~~~~~v~~~~-~~~~~~l~~~ll~~~gi~v~----~g~~f~~~~~~~~Ris~~--~~----~~~l~~~l~~l 382 (385)
T PRK09276 315 EVEPP-KATFYVWAPVPK-GYTSAEFATLLLDKAGVVVT----PGNGFGEYGEGYFRIALT--VP----DERIEEAVERI 382 (385)
T ss_pred cccCC-CcceEEEEECCC-CCCHHHHHHHHHHhCCEEEC----CchhhCCCCCCeEEEEeC--CC----HHHHHHHHHHH
Confidence 76544 334556777643 45677776665 56899996 5543 2223578999985 23 56666655555
Q ss_pred H
Q 010058 456 D 456 (519)
Q Consensus 456 ~ 456 (519)
.
T Consensus 383 ~ 383 (385)
T PRK09276 383 K 383 (385)
T ss_pred h
Confidence 3
No 71
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.94 E-value=6.8e-24 Score=219.81 Aligned_cols=336 Identities=14% Similarity=0.076 Sum_probs=226.8
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC---CCCCcceEEeCCc
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD---PAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~---~~~~~~~V~~~sG 151 (519)
+.++|..+++. +++.+.+++.+.+.... .+.|+. .+...+++.+.+++.+.+|.+ +++ +|++|+|
T Consensus 45 ~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~------~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~---~I~it~G 114 (410)
T PRK06290 45 ELIDMGVGEPDEMADESVVEVLCEEAKKPE------NRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVT---EVIHSIG 114 (410)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCC------CCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcc---eEEEccC
Confidence 35889888875 57788888877654311 122332 456788888888888877754 431 5999999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klI 229 (519)
++ ++..++.++++|||.|+++++.|..+.. .+...|..+..++ ++++ ++.+|++++++.+.+ ++|+|
T Consensus 115 s~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~v~~v~--~~~~~~~~~d~~~l~~~~~~-~~k~i 183 (410)
T PRK06290 115 SKPALAMLPSCFINPGDVTLMTVPGYPVTGT--------HTKYYGGEVYNLP--LLEENNFLPDLDSIPKDIKE-KAKLL 183 (410)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCCCccHHH--------HHHHcCCEEEEEe--cCCCcCCcCCHHHHHHhhcc-cceEE
Confidence 98 8877888999999999999977655433 2233455555554 4433 467899999998876 89999
Q ss_pred EEc-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CC---CCCeEEEEcCCCcc--cCCCcce
Q 010058 230 VAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PF---EYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 230 i~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~---~~~di~~~S~~K~l--~GprgG~ 297 (519)
+++ |+| +|...+. ++|.++|+++|++||+|+++... ...+..++ .+ ...++++.|++|.+ +|.|.||
T Consensus 184 ~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~-~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ 262 (410)
T PRK06290 184 YLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAAL-TFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAF 262 (410)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhc-eeCCCCcChhcCCCccccEEEEeechhhcCCchhheEe
Confidence 999 777 8888874 67777899999999999997632 22221111 01 13568999999986 7888899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY 377 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 377 (519)
+++++ ++.+.+.........+. ......++..++.. ....++.++++.++++.+.+.|++.|+
T Consensus 263 ii~~~--------------~l~~~l~~~~~~~~~~~-~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~ 325 (410)
T PRK06290 263 VVGNE--------------LIVKAFATVKDNNDSGQ-FIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEVGF 325 (410)
T ss_pred EEeCH--------------HHHHHHHHHHhccccCC-cHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99887 55555544332222222 22233333444432 223477788899999999999999998
Q ss_pred EEecCCCCcceeeeeccCCC------CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKG------IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
.+..+ ..+.+.|+.+.+.- .+..++.+.|.+.|+.+. +|+.. .++++||++...+.. +++++++
T Consensus 326 ~~~~p-~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~---~p~~~---~~~~lRi~~~~~~~~---~~~~~~~ 395 (410)
T PRK06290 326 KAEMP-GGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLIST---VPWDD---AGHFLRFSVTFEAKD---EEEEDRI 395 (410)
T ss_pred eecCC-CeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEE---ECCcc---ccCeEEEEEEccccc---ccchhHH
Confidence 76543 33455666764321 256677777766544332 36653 136899998755442 8999999
Q ss_pred HHHHHHHHHH
Q 010058 452 AEFFDAAVKL 461 (519)
Q Consensus 452 ~~~l~~~l~~ 461 (519)
+++|.+.|..
T Consensus 396 ~~~l~~~~~~ 405 (410)
T PRK06290 396 LEEIKRRLSD 405 (410)
T ss_pred HHHHHHHHhh
Confidence 9999998864
No 72
>PRK07683 aminotransferase A; Validated
Probab=99.94 E-value=8.4e-24 Score=218.19 Aligned_cols=355 Identities=15% Similarity=0.095 Sum_probs=232.6
Q ss_pred hhhhcCHHHHHHHHHHHHhcccCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 010058 56 PLEEIDPEIADIIELEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133 (519)
Q Consensus 56 ~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~ 133 (519)
+++...+..+..+........+.++|..+.+ ++++.+.+++.+.+.+.+ ..|+...+..++++...+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~l~~ 80 (387)
T PRK07683 8 RVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITENY-------TSYTHNAGLLELRKAACNFVKD 80 (387)
T ss_pred HHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHH
Confidence 3343344444444333333345688877765 346788899988876532 1233335567788888788877
Q ss_pred HcCC--CCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCC
Q 010058 134 AFQL--DPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG 210 (519)
Q Consensus 134 ~~g~--~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~ 210 (519)
.+|+ +++. +|++|+|++ |+..++.+++++||+|+++++.+.++... +...|..+.. ++.+.+++
T Consensus 81 ~~g~~~~~~~---~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~--~~~~~~~~ 147 (387)
T PRK07683 81 KYDLHYSPES---EIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPI--------IRLCGAKPVF--IDTRSTGF 147 (387)
T ss_pred HhCCCCCCCC---cEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHH--------HHHcCCEEEE--eecCcccC
Confidence 7676 4431 699999988 88888889999999999998766655332 2233544443 44555667
Q ss_pred CCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC------CCC
Q 010058 211 YIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF------EYA 279 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~------~~~ 279 (519)
.+|.+++++.+.+ ++++|+++ ++| +|...+ +++|.++|+++|+++|+|+++..... .+. ..++ ..-
T Consensus 148 ~~~~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~-~~~-~~~~~~~~~~~~~ 224 (387)
T PRK07683 148 RLTAEALENAITE-KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVY-EQP-HTSIAHFPEMREK 224 (387)
T ss_pred CCCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccccccee-CCC-cCChhhccCCcCC
Confidence 8899999998876 89999888 666 787655 78888999999999999999653321 111 1111 123
Q ss_pred eEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 280 DVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 280 di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
.+++.|++|.+ +|.|.||+++++ ++.+.+.... .....+++.....++...+... ....++.
T Consensus 225 vi~~~s~SK~~~~pGlRiG~i~~~~--------------~l~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~ 288 (387)
T PRK07683 225 TIVINGLSKSHSMTGWRIGFLFAPS--------------YLAKHILKVH-QYNVTCASSISQYAALEALTAG-KDDAKMM 288 (387)
T ss_pred eEEEeeccccccCccceeEEEEcCH--------------HHHHHHHHHH-HhccCCCChHHHHHHHHHHhCC-hHHHHHH
Confidence 58889999986 688889999987 4455443321 1111122223333333344332 2235677
Q ss_pred HHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHH-HhhcccCeEEcccccCCCC-CCCCCCeEEecc
Q 010058 358 QEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVE-KVLESVHIAANKNTVPGDV-SAMVPGGIRMGT 435 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~ 435 (519)
++++.++++.+.+.|.+.|+.+..+ ..+++.|+.+...+.+..++. .+|+++||.+. ||.. +...++++||++
T Consensus 289 ~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~----pg~~f~~~~~~~~Ri~~ 363 (387)
T PRK07683 289 RHQYKKRRDYVYNRLISMGLDVEKP-TGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVV----PGSAFSEYGEGYVRLSY 363 (387)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccCC-CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEc----CchhhCCCCCCeEEEEe
Confidence 8888999999999999888765543 334455555543345555555 45688999996 5554 333468999998
Q ss_pred CccccCCCCHHHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.. + ++++++.++.|.+++.
T Consensus 364 ~~--~----~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 364 AY--S----IETLKEGLDRLEAFLQ 382 (387)
T ss_pred cC--C----HHHHHHHHHHHHHHHH
Confidence 63 4 6888888888888775
No 73
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.94 E-value=4e-24 Score=228.19 Aligned_cols=362 Identities=16% Similarity=0.099 Sum_probs=229.3
Q ss_pred hhhhhhhcCHHHHHHHHHHHHh----cccCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHH
Q 010058 53 LNAPLEEIDPEIADIIELEKAR----QWKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 123 (519)
Q Consensus 53 ~~~~l~~~~~~~~~~~~~e~~~----~~~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~l 123 (519)
+++++..+.+.+...+..+.++ ..+.|+|..++. .+|+.+++++.+.+.+.. + |+...+..++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~--~------Y~~~~G~~~l 190 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTE--G------YSDSKGLFSA 190 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCC--C------CCCCcChHHH
Confidence 4566666666655544333332 246688987544 248889999888765321 3 4445667788
Q ss_pred HHHHHHHHHHHcC--CCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEE
Q 010058 124 ESLCQKRALDAFQ--LDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 200 (519)
Q Consensus 124 e~~~~~~~~~~~g--~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 200 (519)
++++.+++.+..+ +++ .+|++++|++ ++..++.++++|||+|+++++.|..+.. .+...|..+..
T Consensus 191 Reaia~~~~~~~~~~~~~----~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~--------~~~~~g~~~v~ 258 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDV----DDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA--------CVNLAGGTAVH 258 (517)
T ss_pred HHHHHHHHHhcCCCCCCh----hHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH--------HHHHCCCEEEE
Confidence 8777777765543 455 3699999998 7777889999999999999977655533 23344555444
Q ss_pred EeeeeCCC-CCCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC-CC
Q 010058 201 MPYRLDES-TGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV-IP 273 (519)
Q Consensus 201 v~~~~d~~-~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~ 273 (519)
++ .+++ ++.+|++++++++++ ++|+|+++ |+| +|..++ +++|.++|++||++||+|+++. .+...+. +.
T Consensus 259 ~~--~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~-~~~~~~~~~~ 334 (517)
T PRK13355 259 YR--CDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYD-RLVMDGLEHT 334 (517)
T ss_pred ee--cCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hhcCCCCCcc
Confidence 44 4433 578999999999886 89988887 777 888877 7788889999999999999964 3332221 11
Q ss_pred CCC---CCC-eEEEEcCCCc--ccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHH
Q 010058 274 SPF---EYA-DVVTTTTHKS--LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALK 347 (519)
Q Consensus 274 ~p~---~~~-di~~~S~~K~--l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~ 347 (519)
+.. +.. -+++.|++|+ ++|+|.||++++...... .++.+.++.... ....++.....+...++.
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~--------~~~~~~l~~~~~--~~~~~~~~~q~a~~~aL~ 404 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIA--------KDYIEGLNMLAN--MRLCSNVPAQSIVQTALG 404 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhH--------HHHHHHHHHHhc--CcCCcChHHHHHHHHHhc
Confidence 110 122 2345788997 589999999865210000 022332222111 112234444444455553
Q ss_pred HhcC-HhH-HHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCC---CcH-HHHHHhhcccCeEEcccccC
Q 010058 348 QVKT-PEY-KAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKG---IDG-SRVEKVLESVHIAANKNTVP 420 (519)
Q Consensus 348 ~~~~-~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~---~~~-~~~~~~L~~~gI~v~~~~~p 420 (519)
.... ..+ .. .+++.++++.+.+.|.+. |+.+..+ ..++++|+.+.... .+. ..+.++|.+.||.+. |
T Consensus 405 ~~~~~~~~~~~-~~~~~~~r~~l~~~L~~~~g~~~~~p-~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~----p 478 (517)
T PRK13355 405 GHQSVKDYLVP-GGRVYEQRELVYNALNAIPGISAVKP-KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIV----Q 478 (517)
T ss_pred CCccHHHHHHH-HHHHHHHHHHHHHHHhcCCCcccCCC-CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEe----C
Confidence 2111 112 22 234566788999999988 8876554 34556666664311 123 345677889999996 6
Q ss_pred CCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 421 GDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 421 ~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
|.. +...++++||++. .+ +++++..++.|.+.+.
T Consensus 479 g~~F~~~~~~~~Ris~~--~~----~~~l~~a~~rl~~~~~ 513 (517)
T PRK13355 479 GTGFNWDKPDHFRVVYL--PR----LEDLEDAMDRLADFFS 513 (517)
T ss_pred cchhCCCCcCEEEEEeC--CC----HHHHHHHHHHHHHHHH
Confidence 654 3235679999984 34 6888888888888775
No 74
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.94 E-value=7.8e-24 Score=219.02 Aligned_cols=332 Identities=15% Similarity=0.149 Sum_probs=219.6
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sG 151 (519)
.+.++|..+.+. +|+.+.+++.+.+.+.. ...|+...+..+++++..+++.+.+|. +++. +|++|+|
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~---~i~vt~G 105 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALADPQ------NHGYPPFEGTASFRQAITDWYHRRYGVELDPDS---EALPLLG 105 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC------CccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCC---eEEEccC
Confidence 456788765432 35667777766654311 123455566678888888888887785 3431 4889999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klI 229 (519)
++ ++..++.++++|||+|++++++|+++... +...|..+..++ ++. +++.+|++++++.+.+ ++|+|
T Consensus 106 ~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~--------~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~~~~-~~k~i 174 (394)
T PRK05942 106 SKEGLTHLALAYVNPGDVVLVPSPAYPAHFRG--------PLIAGAQIYPII--LKPENDWLIDLSSIPEEVAQ-QAKIL 174 (394)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH--------HHHcCCEEEEee--cCCccCCccCHHHHHHhccc-cceEE
Confidence 98 88878889999999999999888766432 223455444444 443 3467999999998876 89999
Q ss_pred EEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC---C---CCCeEEEEcCCCcc--cCCCcc
Q 010058 230 VAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP---F---EYADVVTTTTHKSL--RGPRGA 296 (519)
Q Consensus 230 i~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p---~---~~~di~~~S~~K~l--~GprgG 296 (519)
+++ |+| +|...+ +++|.++|+++|+++|+|+++..... .+....+ + ....+++.|++|.+ +|.|.|
T Consensus 175 ~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~-~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG 253 (394)
T PRK05942 175 YFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAF-DGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVG 253 (394)
T ss_pred EEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhcc-CCCCCCChhhCCCccccEEEEecchhccCChhhhee
Confidence 998 777 888887 67888889999999999999653222 1111111 1 13457788999965 678889
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
|+++++ ++.+.+...... ...+++.....++..+++.. ....++.++++.++++.+.+.|.+.|
T Consensus 254 ~i~~~~--------------~l~~~l~~~~~~-~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~ 317 (394)
T PRK05942 254 FVVGNR--------------HIIQGLRTLKTN-LDYGIFSALQKAAETALQLP-DSYLQQVQERYRTRRDFLIQGLGELG 317 (394)
T ss_pred eeecCH--------------HHHHHHHHHHhh-cccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999887 555555433221 11122333444445556532 23457778888999999999999888
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHH-hhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEK-VLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
+.+..+ ..+.++|+.+.. +++..++.. .|+++||.+. ||+. +....++||+++.. +.+.+.+.
T Consensus 318 ~~~~~~-~~~~f~~~~~~~-~~~~~~~~~~~l~~~gV~v~----~g~~f~~~~~~~iRis~~~---------~~~~l~~~ 382 (394)
T PRK05942 318 WNIPPT-KATMYLWVPCPV-GMGSTDFALNVLQKTGVVVT----PGNAFGEGGEGYVRISLIA---------DCDRLGEA 382 (394)
T ss_pred CeecCC-CeeeEEEEECCC-CCCHHHHHHHHHHHCCEEEe----CChhhCcCCCCeEEEEecC---------CHHHHHHH
Confidence 876554 334566777643 445566554 6678999996 5554 22335799999741 34556666
Q ss_pred HHHHH
Q 010058 455 FDAAV 459 (519)
Q Consensus 455 l~~~l 459 (519)
|+++.
T Consensus 383 l~~l~ 387 (394)
T PRK05942 383 LDRLK 387 (394)
T ss_pred HHHHH
Confidence 65544
No 75
>PRK07777 aminotransferase; Validated
Probab=99.94 E-value=7e-24 Score=218.95 Aligned_cols=356 Identities=14% Similarity=0.124 Sum_probs=231.3
Q ss_pred hhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010058 57 LEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA 134 (519)
Q Consensus 57 l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~ 134 (519)
+..+.++++..+...... .+.++|..+... .++.+.+++.+.+.... ..|+...+..++++.+.+++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~ 77 (387)
T PRK07777 6 LRPFGTTIFAEMSALAVR-TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-------NQYPPGPGIPELRAAIAAQRRRR 77 (387)
T ss_pred hhhcCccHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCCHHHHHHHHHHHHHH
Confidence 444555555555554432 356888765432 35667777777665421 23454466678888888888888
Q ss_pred cCCCCCCCcc-eEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCC
Q 010058 135 FQLDPAKWGV-NVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYI 212 (519)
Q Consensus 135 ~g~~~~~~~~-~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~i 212 (519)
+|.+.+. . +|++|+|++ ++.+++.++++|||+|++.++.|.++.. .+...|..+..+++.-+..++.+
T Consensus 78 ~g~~~~~--~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~ 147 (387)
T PRK07777 78 YGLEYDP--DTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAA--------VIAMAGAHRVPVPLVPDGRGFAL 147 (387)
T ss_pred hCCCCCC--CCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHCCCEEEEeecCCccCCCcC
Confidence 8875321 1 589999988 8888888999999999999877665432 22334554445544322235679
Q ss_pred CHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC------CCCCeE
Q 010058 213 DYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP------FEYADV 281 (519)
Q Consensus 213 D~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p------~~~~di 281 (519)
|++++++.+.+ ++++|+++ ++| +|...+ +++|.++|+++++++|+|+++.. +...+....+ ..+.++
T Consensus 148 d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~~~i 225 (387)
T PRK07777 148 DLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEH-LVFDGARHLPLATLPGMRERTV 225 (387)
T ss_pred CHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchh-cccCCCCcccHhhCCCCcCcEE
Confidence 99999998876 89999988 666 786654 78889999999999999998643 2221111111 124578
Q ss_pred EEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHH
Q 010058 282 VTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE 359 (519)
Q Consensus 282 ~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~ 359 (519)
++.|++|++ +|.|.|++++++ ++.+.+...........+.. ...+++.++... ....++.++
T Consensus 226 ~~~S~SK~~g~~GlRiG~~~~~~--------------~l~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~-~~~~~~~~~ 289 (387)
T PRK07777 226 TISSAAKTFNVTGWKIGWACGPA--------------PLIAAVRAAKQYLTYVGGAP-FQPAVAHALDHE-DAWVAALRD 289 (387)
T ss_pred EEeechhhccCcCceeEEEecCH--------------HHHHHHHHHHhhcccCCCCH-HHHHHHHHHhCC-cHHHHHHHH
Confidence 999999987 477889999887 44444432211111111122 223333444432 334577788
Q ss_pred HHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC-CCcHHHHHHhh-cccCeEEcccccCCCC----CCCCCCeEEe
Q 010058 360 QVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK-GIDGSRVEKVL-ESVHIAANKNTVPGDV----SAMVPGGIRM 433 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~L-~~~gI~v~~~~~p~~~----~~~~~~~iRi 433 (519)
++.++++.+.+.|.+.|+.+..+ ..+++.|+.+... ..++.++.+.| +++||.+. ||.. .+...+++||
T Consensus 290 ~~~~~~~~l~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~~~~~Ri 364 (387)
T PRK07777 290 SLQAKRDRLAAGLAEAGFEVHDS-AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAI----PMSVFYDPADAWNHLVRF 364 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCccCC-CcceEEEecccccCCCCHHHHHHHHHHhCCEEEe----CchHhCCCCcCCCCeEEE
Confidence 99999999999999988776544 3355666665432 23567777777 57899996 5542 1223568999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
++.. . ++++++.++.|.++.
T Consensus 365 ~~~~--~----~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 365 AFCK--R----DDTLDEAIRRLRALR 384 (387)
T ss_pred EecC--C----HHHHHHHHHHHHHHh
Confidence 9863 3 688888888887654
No 76
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.94 E-value=1.2e-23 Score=217.43 Aligned_cols=340 Identities=15% Similarity=0.134 Sum_probs=226.9
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..+++. +++.+.+++.+.+...+ ..|+...+..++++.+.+++...+|+..+.- .+|++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~ 101 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQ-------SHYTGMAGLLELRQAAADFVKEKYNLDYAPE-NEILVTIGAT 101 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-------CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChH
Confidence 456888777664 46778888887765422 2244445667888888888887777632100 2699999987
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIV 230 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi 230 (519)
++..++.++++|||+|++.++.|+++.. .+...|..+..++ .+.+++.+|++.++++++.. ++++|+
T Consensus 102 ~al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~~~~~~~~~~~i~ 171 (391)
T PRK07309 102 EALSASLTAILEPGDKVLLPAPAYPGYEP--------IVNLVGAEIVEID--TTENDFVLTPEMLEKAILEQGDKLKAVI 171 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCEEEEEe--cCCcCCcCCHHHHHHHhhccCCCeEEEE
Confidence 8887889999999999999977776543 2223455444443 44445689999999988642 588998
Q ss_pred Ec-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC----CCCeEEEEcCCCcc--cCCCcceEE
Q 010058 231 AG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF----EYADVVTTTTHKSL--RGPRGAMIF 299 (519)
Q Consensus 231 ~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~----~~~di~~~S~~K~l--~GprgG~i~ 299 (519)
++ |+| +|...+ +++|.++|++||+++|+|+++.. +...+....++ ..-.+++.|++|.+ +|.|.||++
T Consensus 172 l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v 250 (391)
T PRK07309 172 LNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSE-LTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIF 250 (391)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccc-eeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEE
Confidence 88 777 787665 78888999999999999999653 22212111111 12348889999986 788889999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
+++ ++.+.+.... +....+++.....++..+++... .......++++++++.+.+.|++.|+.+
T Consensus 251 ~~~--------------~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 314 (391)
T PRK07309 251 APA--------------EFTAQLIKSH-QYLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEKMTDLGFKI 314 (391)
T ss_pred eCH--------------HHHHHHHHHH-hhcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 987 4555444321 11112334444444444554321 1235566788889999999999988876
Q ss_pred ecCCCCcceeeeeccCC-CCcHHHHHH-hhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNK-GIDGSRVEK-VLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~-~~~~~~~~~-~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
..+ ..+.+.|+.+... +.+..++.+ +++++||.+. ||.. ++..+++|||++.. + .+++++.++.|.
T Consensus 315 ~~p-~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~~--~----~~~l~~~i~~l~ 383 (391)
T PRK07309 315 IKP-DGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFI----PGAAFGPYGEGYVRLSYAA--S----METIKEAMKRLK 383 (391)
T ss_pred cCC-CeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEecC--C----HHHHHHHHHHHH
Confidence 654 2344556555431 224556664 5667999996 6654 34446899999763 3 678998888888
Q ss_pred HHHHH
Q 010058 457 AAVKL 461 (519)
Q Consensus 457 ~~l~~ 461 (519)
+++..
T Consensus 384 ~~~~~ 388 (391)
T PRK07309 384 EYMEE 388 (391)
T ss_pred HHHHh
Confidence 87753
No 77
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=2.6e-24 Score=220.01 Aligned_cols=326 Identities=16% Similarity=0.142 Sum_probs=213.8
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCC-CC---CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGA-RY---YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~-~~---y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
|+-|.+..++.+.+++++.+...+ + +.|.. .. ......+.+++ +.+++++|++ ++.+++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~l~----~~la~~~g~~------~i~~~~g~t~ 70 (361)
T cd06452 4 IDPIQRGGRLTPEARKALIEWGDG-Y--SVCDFCRGRLDEIEKPPIKDFH----HDLAEFLGMD------EARVTPGARE 70 (361)
T ss_pred CChhhcCCCCCHHHHHHHHHHhcc-c--CCccccccccccccCchHHHHH----HHHHHHcCCc------eEEEeCCHHH
Confidence 344566778899999999887633 3 33321 11 11122344444 8889999983 388888888
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhh------hCC
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAAL------FRP 226 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~------~k~ 226 (519)
++..++.++++|||+|++.++.|.+... .+...|..+..++. +++ ++.+|++++++++.+ .++
T Consensus 71 al~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~--~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 140 (361)
T cd06452 71 GKFAVMHSLCEKGDWVVVDGLAHYTSYV--------AAERAGLNVREVPN--TGHPEYHITPEGYAEVIEEVKDEFGKPP 140 (361)
T ss_pred HHHHHHHHhcCCCCEEEEcCCcchHHHH--------HHHhcCCEEEEEec--CCCCCcccCHHHHHHHHHHHhhccCCCc
Confidence 8888999999999999998876655532 22334655556554 332 358999999998863 268
Q ss_pred cEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCC-CcceEEeecc
Q 010058 227 KLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKG 303 (519)
Q Consensus 227 klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gp-rgG~i~~~~~ 303 (519)
++|+++ ++| +|...|+++|.++|+++|+++++|++|..|......... ++|++++|+||++++| ++|++++++
T Consensus 141 ~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~~~~~G~l~~~~- 216 (361)
T cd06452 141 ALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKEL---GADFIVGSGHKSMAASAPIGVLATTE- 216 (361)
T ss_pred eEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHc---CCCEEEecCCccccCCCCeEEEEECH-
Confidence 899888 555 889999999999999999999999999876543322222 5899999999998654 559999987
Q ss_pred cccccccCcchhhhHHHHhhhcccC-------CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFP-------GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER- 375 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~-------~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 375 (519)
++.+++.....+ ...+++....++++.++++.+. +.-+...+..++++++.+.|+++
T Consensus 217 -------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~l~ 281 (361)
T cd06452 217 -------------EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAELEKIE 281 (361)
T ss_pred -------------HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 444443322111 1113333334444455555432 12223344456678999999998
Q ss_pred CCEEecCC-CCcceeeeeccC-------CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHH
Q 010058 376 GYDLVSGG-TENHLVLVNLRN-------KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEED 447 (519)
Q Consensus 376 g~~~~~~~-~~~~~~~v~~~~-------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~d 447 (519)
|++++... ....++.++... ...++.++.+.|.++||.+. .++ ....+|+++.. .+ ++|
T Consensus 282 g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~~-----~~~~~ri~~~g-~~----~e~ 348 (361)
T cd06452 282 GIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGI---KPG-----LTRYFKLSTYG-LT----WEQ 348 (361)
T ss_pred CeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEE---cCC-----CceEEEEEecC-CC----HHH
Confidence 99887432 233344444321 01223468888888899863 121 23479998744 24 799
Q ss_pred HHHHHHHHHHHH
Q 010058 448 FEKVAEFFDAAV 459 (519)
Q Consensus 448 i~~l~~~l~~~l 459 (519)
++.++++|++++
T Consensus 349 ~~~l~~al~~~~ 360 (361)
T cd06452 349 VEYVVDAFKEIA 360 (361)
T ss_pred HHHHHHHHHHHh
Confidence 999999998654
No 78
>PRK08068 transaminase; Reviewed
Probab=99.94 E-value=1.2e-23 Score=217.34 Aligned_cols=332 Identities=18% Similarity=0.169 Sum_probs=218.8
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sG 151 (519)
.+.|+|..+++. +++.+.+++.+.+..... ..|+...+..++++++.+++.+.+|. ++++ +|.+|+|
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~---~i~it~G 102 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAENPAN------HKYSPFRGYPFLKEAAADFYKREYGVTLDPET---EVAILFG 102 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---cEEEcCC
Confidence 456888776543 357788888877654211 22333455678888888888777785 4431 5899999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klI 229 (519)
++ +...++.++++|||+|++++++++.+.. .+...|..+..++ ++++ ++.+|++++++.+.+ ++++|
T Consensus 103 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~i~--~~~~~~~~~d~~~l~~~~~~-~~~~v 171 (389)
T PRK08068 103 GKAGLVELPQCLMNPGDTILVPDPGYPDYLS--------GVALARAQFETMP--LIAENNFLPDYTKIPEEVAE-KAKLM 171 (389)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCEEEEee--cccccCCCCCHHHHHHhccc-cceEE
Confidence 87 7777888999999999999977766543 2334565555555 4433 567899999998876 89999
Q ss_pred EEc-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC------CCCeEEEEcCCCcc--cCCCcc
Q 010058 230 VAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF------EYADVVTTTTHKSL--RGPRGA 296 (519)
Q Consensus 230 i~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~------~~~di~~~S~~K~l--~GprgG 296 (519)
+++ |+| +|..++. ++|.++|+++|+++|+|+++.. +...+..+.++ ....+++.|++|.+ +|.|.|
T Consensus 172 ~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~-~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 250 (389)
T PRK08068 172 YLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGA-IGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVA 250 (389)
T ss_pred EEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhh-hccCCCCCcChhhCCCccCCEEEEecchhccCCccceeE
Confidence 998 777 8888876 5667788999999999999632 22221111111 12357888999986 688889
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
|+++++ ++.+.+.....+...+.+...+.+ +..++... ....+..++++.++++.+.+.|++.|
T Consensus 251 ~~~~~~--------------~l~~~l~~~~~~~~~~~~~~~q~~-~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~g 314 (389)
T PRK08068 251 FAVGNE--------------SVIEAINLLQDHLFVSLFGAIQDA-AIEALLSD-QSCVAELVARYESRRNAFISACREIG 314 (389)
T ss_pred eEecCH--------------HHHHHHHHHHhhccCCCChHHHHH-HHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999877 555555443222222333222222 23333321 23457888999999999999999988
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
+.+..+ ..+.++|+.+.. +.+..++.+.|. ++||.+. ||.. +....+++||++. +. ++.+...++.
T Consensus 315 ~~~~~~-~g~~~~~v~~~~-~~~~~~~~~~l~~~~gi~v~----pg~~f~~~~~~~iRi~~~--~~----~~~l~~al~~ 382 (389)
T PRK08068 315 WEVDAP-KGSFFAWMPVPK-GYTSEQFADLLLEKAHVAVA----PGNGFGEHGEGYVRVGLL--TD----EERLREAVER 382 (389)
T ss_pred CcccCC-CeeEEEEEECCC-CCCHHHHHHHHHHhCCEEEe----cchHhCccCCCeEEEEEc--CC----HHHHHHHHHH
Confidence 875543 334556777643 456778877775 5799996 5543 3334578999985 23 4445444444
Q ss_pred HH
Q 010058 455 FD 456 (519)
Q Consensus 455 l~ 456 (519)
|.
T Consensus 383 l~ 384 (389)
T PRK08068 383 IG 384 (389)
T ss_pred HH
Confidence 43
No 79
>PRK07550 hypothetical protein; Provisional
Probab=99.94 E-value=1.1e-23 Score=217.41 Aligned_cols=337 Identities=14% Similarity=0.093 Sum_probs=224.3
Q ss_pred cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 75 QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 75 ~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
....++|..+++. +++.+.+++.+.+.+.. ...|+...+..++++.+.+++.+.+|..... .+|++|+|+
T Consensus 28 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~ 99 (386)
T PRK07550 28 DGPLIDLSQAVPGYPPPPELLRALAEAAADPA------AHLYGPVEGLPELREAYAAHYSRLYGAAISP--EQVHITSGC 99 (386)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcC------CcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCc
Confidence 3456888877764 46788888887764311 1224444566788888888998888864322 369999998
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi 230 (519)
+ ++..++.++++|||+|+++++.+..+.. .+...|..+..++ .++ +++.+|.+++++.+++ ++++|+
T Consensus 100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~~~~~l~~~~~~-~~~~v~ 168 (386)
T PRK07550 100 NQAFWAAMVTLAGAGDEVILPLPWYFNHKM--------WLDMLGIRPVYLP--CDEGPGLLPDPAAAEALITP-RTRAIA 168 (386)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCCEEEEEe--cCCCcCCCCCHHHHHHHhcc-cCcEEE
Confidence 7 8887888999999999999977766543 1223455555554 443 4567899999999987 888877
Q ss_pred Ec-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC-CCC-----CCeEEEEcCCCcc--cCCCcce
Q 010058 231 AG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS-PFE-----YADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 231 ~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~-p~~-----~~di~~~S~~K~l--~GprgG~ 297 (519)
++ ++| +|...+ +++|.++|+++|+++|+|+++.. +...+..+. .+. .-.+++.|++|++ +|.|.|+
T Consensus 169 ~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 247 (386)
T PRK07550 169 LVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRD-FDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGA 247 (386)
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchh-hccCCCCCcchhhCCCccccEEEEecchhhccCcccceEe
Confidence 76 777 786665 77899999999999999998642 222111111 111 1246788999987 5888999
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G 376 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 376 (519)
+++++ ++...+........ .+++.....++..++... ....++.++++.++++.+.+.|.+. +
T Consensus 248 i~~~~--------------~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 311 (386)
T PRK07550 248 VVASP--------------ARIAEIEKFMDTVA-ICAPRIGQIAVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLPG 311 (386)
T ss_pred eecCH--------------HHHHHHHHHHhhcc-cCCCcHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99987 44444443322211 222333333444455432 2233566778888999999999886 6
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
+.+.. +...+.|+.+...+.+..++.+.| ++.||.+. ||.. +....+++||++... + ++++++.++.
T Consensus 312 ~~~~~--~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~~~-~----~~~~~~~~~~ 380 (386)
T PRK07550 312 WELLA--SGAYFAYVRHPFPDRPSREVARRLAKEAGILCL----PGTMFGPGQEGYLRLAFANA-D----VAGIGELVER 380 (386)
T ss_pred ceeCC--CceEEEEecCCCCCCCHHHHHHHHHHhcCEEEe----CchhhCCCCCCEEEEEeecC-C----HHHHHHHHHH
Confidence 65432 344566776643356777877765 67899997 5553 222357899998643 3 6899888888
Q ss_pred HHHH
Q 010058 455 FDAA 458 (519)
Q Consensus 455 l~~~ 458 (519)
|.+.
T Consensus 381 l~~~ 384 (386)
T PRK07550 381 LRAF 384 (386)
T ss_pred HHhh
Confidence 8653
No 80
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=1.4e-23 Score=215.70 Aligned_cols=316 Identities=16% Similarity=0.194 Sum_probs=215.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhc---
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALL--- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all--- 163 (519)
+.+.+.+++...+.... |.++ .|.+ ...+++.+++++++++|++++ ++.+++|++ ++..++.++.
T Consensus 32 ~~~~~~~a~~~~~~~~~--~~~~--~~~~---~~~~~~~~~~~la~~~g~~~~----~~~~~~g~~~~~~~~~~~~~~~~ 100 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNL--GDPG--LFPG---TKKIEEEVVGSLGNLLHLPDA----YGYIVSGGTEANIQAVRAAKNLA 100 (373)
T ss_pred chHHHHHHHHHHhhcCC--CCcc--cCcc---HHHHHHHHHHHHHHHhCCCCC----CeEEeccHHHHHHHHHHHHHHHH
Confidence 44556777776654422 4443 2333 245567788999999999764 356666665 7776666553
Q ss_pred ---CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCc-EEEEcccc-ccc
Q 010058 164 ---KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPK-LIVAGASA-YAR 238 (519)
Q Consensus 164 ---~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~k-lIi~~~sn-~g~ 238 (519)
++||+|++++..|.++.. .+...|..+..++. + +++.+|++++++++++ ++. +++++++| +|.
T Consensus 101 ~~~~~g~~vl~~~~~h~~~~~--------~~~~~G~~~~~v~~--~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~tG~ 168 (373)
T TIGR03812 101 REEKRTPNIIVPESAHFSFEK--------AAEMLGLELRYAPL--D-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTELGQ 168 (373)
T ss_pred hccCCCcEEEECCcchHHHHH--------HHHHcCCeEEEEee--C-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCCCc
Confidence 478999998876655322 23344666666654 3 3578999999999987 664 45455555 899
Q ss_pred cccHHHHHHHHhhcCCEEEehhhhhhhccccC---CCCCC----CCCCeEEEEcCCCcccCC-Ccc-eEEeecccccccc
Q 010058 239 LYDYARIRKVCDKQKAVMLADMAHISGLVAAG---VIPSP----FEYADVVTTTTHKSLRGP-RGA-MIFFRKGVKEINK 309 (519)
Q Consensus 239 ~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~---~~~~p----~~~~di~~~S~~K~l~Gp-rgG-~i~~~~~~~~~~~ 309 (519)
..|+++|.++|+++|+++++|+||..+..... ....+ ..++|++++|+||++.+| ++| +++.++
T Consensus 169 ~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~------- 241 (373)
T TIGR03812 169 IDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK------- 241 (373)
T ss_pred cCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH-------
Confidence 99999999999999999999999876543211 11111 126899999999986544 345 444454
Q ss_pred cCcchhhhHHHHhhh--cccCC-----CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 310 QGQEVMYAYEDKINQ--AVFPG-----LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 310 ~g~~~~~~~~~~i~~--~~~~~-----~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
++.+.+.. ..... ..|+++...++++.++++.+...++++..++..+++++|.+.|+++|+..+.+
T Consensus 242 -------~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 314 (373)
T TIGR03812 242 -------SYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIE 314 (373)
T ss_pred -------HHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcC
Confidence 33333221 01011 12567777888888999988777889999999999999999999998765443
Q ss_pred CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 383 GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 383 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
+ ..+++.+.+ . +..++.+.|.+.||.++.. ..+..||++++..++ ++|++++++.|++
T Consensus 315 ~-~~~~v~~~~--~--~~~~v~~~L~~~gi~v~~~--------~~~~~iRis~~~~~t----~edid~l~~~L~~ 372 (373)
T TIGR03812 315 P-VLNIVAFEV--D--DPEEVRKKLRDRGWYVSVT--------RCPKALRIVVMPHVT----REHIEEFLEDLKE 372 (373)
T ss_pred C-CceEEEEEe--C--CHHHHHHHHHHCCceeccC--------CCCCEEEEEEECCCC----HHHHHHHHHHHhh
Confidence 2 233433332 2 2457888888899999621 124689999988888 8999999999975
No 81
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.93 E-value=4.7e-24 Score=220.07 Aligned_cols=333 Identities=18% Similarity=0.210 Sum_probs=222.1
Q ss_pred ccCeeecCCCC--C-CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 76 WKGLELIPSEN--F-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 76 ~~~i~L~a~en--~-~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
++.|++..+++ + ++|.|++++.+.+.. |..+++..+...+ ...+.+..++++++++|.+ ..+++++|+
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g---~~~~~~~l~~~la~~~~~~-----~~i~~~~g~ 109 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARR-YGAGSGGSRLVTG---NSPAHEALEEELAEWFGAE-----RALLFSSGY 109 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHh-cCCCCCCcCcccC---CcHHHHHHHHHHHHHhCCC-----cEEEECcHH
Confidence 45688887765 3 578999999998865 4323333222111 1233344558888889853 258888888
Q ss_pred HHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEE
Q 010058 153 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIV 230 (519)
Q Consensus 153 ~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi 230 (519)
.++..++.++++|||+|++.++.|+++... ....|..+..++ ..|++++++.+++. ++.+++
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~--------~~~~g~~~~~~~--------~~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLIDG--------ARLSRARVRRYP--------HNDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHHH--------HHhcCCceEEeC--------CCCHHHHHHHHHhccCCCeEEE
Confidence 877777788899999999999888776542 223344443332 23889999988753 245555
Q ss_pred Ecc-cc-ccccccHHHHHHHHhhcCCEEEehhhhhhhcccc-CC--CC-CCCC--CCeEEEEcCCCcccCCCcceEEeec
Q 010058 231 AGA-SA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAA-GV--IP-SPFE--YADVVTTTTHKSLRGPRGAMIFFRK 302 (519)
Q Consensus 231 ~~~-sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~-~~--~~-~p~~--~~di~~~S~~K~l~GprgG~i~~~~ 302 (519)
+++ .+ +|...++++|+++|++||+++|+|++|..|.... +. .. ..+. ..++++.|+||++ |+.||++++++
T Consensus 174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~~ 252 (385)
T PRK05958 174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGSE 252 (385)
T ss_pred EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcCH
Confidence 553 33 6788999999999999999999999997664431 11 00 0111 2458889999998 55779988876
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCC-CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQ-GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~-g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
++.+.+.....+... ++++...++++.++++..... +...+++.++++++.+.|++.|++++.
T Consensus 253 --------------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~ 316 (385)
T PRK05958 253 --------------TLIDYLINRARPFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALGFQLMD 316 (385)
T ss_pred --------------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCC
Confidence 444444322222222 334555666666777765432 567888999999999999998887654
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+ .+.++++.+.. ..+..++.+.|.+.||.++....+. .+.+.+++|++++..++ ++|++++++.|++++
T Consensus 317 ~--~~~~~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~--~~~~~~~lRis~~~~~~----~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 317 S--QSAIQPLIVGD-NERALALAAALQEQGFWVGAIRPPT--VPAGTSRLRITLTAAHT----EADIDRLLEALAEAL 385 (385)
T ss_pred C--CCCEEEEEeCC-HHHHHHHHHHHHHCCceEecccCCC--CCCCCceEEEEecCCCC----HHHHHHHHHHHHhcC
Confidence 3 23455555432 2345678888888999997322121 12234689999988778 899999999997753
No 82
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=7.1e-24 Score=212.78 Aligned_cols=328 Identities=21% Similarity=0.244 Sum_probs=236.6
Q ss_pred CeeecCCCCCC----cHHHHHHHhhHhhhccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPSENFT----SVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~en~~----~~~V~ea~~~~l~~~~~~g~p~~~~-y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.+++ +|.+++ .|.+++++.+.+.. |.-|..++|. +|..+...+|| +.+++++|.+. .++++||-
T Consensus 41 ~~nf-~SNdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~-----al~f~SGy 109 (388)
T COG0156 41 VLNF-CSNDYLGLASHPELIEAAKAAIRR-YGVGAGGSRLISGTSDLHVELE----EELADFLGAEA-----ALLFSSGF 109 (388)
T ss_pred eEee-eccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEEcccc
Confidence 3555 466664 78899999998876 6557778775 44455577888 89999999986 49999999
Q ss_pred HHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CCc
Q 010058 153 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-----RPK 227 (519)
Q Consensus 153 ~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~k 227 (519)
.||.+++.+|+++||.|+...+.|.+.+. ++.+++..... |. ..|+++|++.+.+. +++
T Consensus 110 ~AN~~~i~~l~~~~dli~~D~lnHASiid--------G~rls~a~~~~--f~------HnD~~~Le~~l~~~~~~~~~~~ 173 (388)
T COG0156 110 VANLGLLSALLKKGDLIFSDELNHASIID--------GIRLSRAEVRR--FK------HNDLDHLEALLEEARENGARRK 173 (388)
T ss_pred hhHHHHHHHhcCCCcEEEEechhhhhHHH--------HHHhCCCcEEE--ec------CCCHHHHHHHHHhhhccCCCce
Confidence 99999999999999999998888877554 44455443322 22 36899999998762 246
Q ss_pred EEEEc--cccccccccHHHHHHHHhhcCCEEEehhhhhhhcccc---CCCC-CCC--CCCeEEEEcCCCcccCCCcceEE
Q 010058 228 LIVAG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAA---GVIP-SPF--EYADVVTTTTHKSLRGPRGAMIF 299 (519)
Q Consensus 228 lIi~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~---~~~~-~p~--~~~di~~~S~~K~l~GprgG~i~ 299 (519)
+|++. .|+.|...|+++|.++|++|++++++|+||..|.+.. |... ..+ ...||+++|++|.|+ --||++.
T Consensus 174 ~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v~ 252 (388)
T COG0156 174 LIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYIA 252 (388)
T ss_pred EEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccCceee
Confidence 66665 8889999999999999999999999999999987652 1111 011 146999999999985 5689999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCC-ccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCE
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGG-PHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYD 378 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~-~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 378 (519)
++. .+.+.+...-.+...++ .+....++...+++.+. ...+.+++..++...+.+.+...|+.
T Consensus 253 g~~--------------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~~~~ 316 (388)
T COG0156 253 GSA--------------ALIDYLRNRARPFIFSTALPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKALGLV 316 (388)
T ss_pred CcH--------------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 998 44554444334444433 34444556667777765 35677888999999999777777887
Q ss_pred EecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 379 LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+.. +.++...+.+.... ...++...|.+.||.+.....|- .|.+...||++..+..| ++|++++++.+.++
T Consensus 317 ~~~--s~s~I~pv~~gd~~-~a~~~s~~l~~~Gi~v~~i~~PT--Vp~gtarlRi~lta~ht----~~~I~~l~~~l~~~ 387 (388)
T COG0156 317 LLP--SESPIIPVILGDEE-RALEASRALLEEGIYVSAIRPPT--VPKGTARLRITLTAAHT----EEDIDRLAEALSEV 387 (388)
T ss_pred cCC--CCCCeeeeEeCCHH-HHHHHHHHHHHCCeeEeeecCCC--CCCCcceEEEEecCCCC----HHHHHHHHHHHHhh
Confidence 633 33444444443321 24556666666699997432222 34567889999998888 99999999999864
No 83
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.93 E-value=9.6e-24 Score=197.14 Aligned_cols=347 Identities=19% Similarity=0.143 Sum_probs=252.3
Q ss_pred eecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHH
Q 010058 80 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVY 159 (519)
Q Consensus 80 ~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~ 159 (519)
-|+|++..+|+.|++|+..-+. |+-+ +..-++.+...+-++..|....+. .-++.++|+.+..+++
T Consensus 20 L~gPGPsnl~~~V~~A~~~~~l-----gh~s-------Pe~~qIm~~v~egikyVFkT~n~~--tf~isgsGh~g~E~al 85 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRPSL-----GHMS-------PEFVQIMDEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAAL 85 (385)
T ss_pred eecCCCcCCCHHHHHhhcCCcc-----ccCC-------HHHHHHHHHHHHHHHHHhccCCCc--eEEEecCCcchHHHHH
Confidence 6789999999999999975332 3322 223345556668888899875543 3488888988999999
Q ss_pred HhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc--ccccc
Q 010058 160 TALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG--ASAYA 237 (519)
Q Consensus 160 ~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~--~sn~g 237 (519)
..++.|||.|++... |.+++.+. ...+-.|..++.++. + .+..+.++.|++++.+++|++|+++ .+++|
T Consensus 86 ~N~lePgd~vLv~~~---G~wg~ra~---D~~~r~ga~V~~v~~--~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTg 156 (385)
T KOG2862|consen 86 VNLLEPGDNVLVVST---GTWGQRAA---DCARRYGAEVDVVEA--D-IGQAVPLEEITEKLSQHKPKAVFVTHGDSSTG 156 (385)
T ss_pred HhhcCCCCeEEEEEe---chHHHHHH---HHHHhhCceeeEEec--C-cccCccHHHHHHHHHhcCCceEEEEecCcccc
Confidence 999999999998762 22221110 111223666666643 3 3568999999999999999999998 66699
Q ss_pred cccc-HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--cccc-ccC-
Q 010058 238 RLYD-YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEIN-KQG- 311 (519)
Q Consensus 238 ~~~d-~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~~~~-~~g- 311 (519)
...| ++.+.++|++|+++++||...+.|........+ ++|+..+.++|.|.+|.| +.|.+++.. +++. +.+
T Consensus 157 V~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew---gVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~ 233 (385)
T KOG2862|consen 157 VLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW---GVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKP 233 (385)
T ss_pred ccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh---cccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCc
Confidence 9999 677889999999999999988888877777777 899999999999999999 888777643 1222 111
Q ss_pred cchhhhHHHHhhhccc----CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcc
Q 010058 312 QEVMYAYEDKINQAVF----PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENH 387 (519)
Q Consensus 312 ~~~~~~~~~~i~~~~~----~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 387 (519)
....+++....+..-. ....-||+...+.++.+||+.+.++++++.+++.+++++++...|++.|++...-...-.
T Consensus 234 ~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~r 313 (385)
T KOG2862|consen 234 VSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELR 313 (385)
T ss_pred eEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhc
Confidence 1123333332221111 112368899999999999999999999999999999999999999999988765322111
Q ss_pred e---eeeeccCCCCcHHHHHHhhcc-cCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 388 L---VLVNLRNKGIDGSRVEKVLES-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 388 ~---~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+ ..+. .+.++|..++...+.. .++.+ .|..++..+..+|||+...+. +.+-|+.+.++|...+..
T Consensus 314 lptvttv~-vp~gvDw~dVv~~~~~~~~vei-----~gglg~~~gKv~RIGl~gcna---~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 314 LPTVTTVK-VPYGVDWKDVVAYAMSHYVVEI-----GGGLGPTVGKVFRIGLLGCNA---NVEYIDNVVELLKLALQR 382 (385)
T ss_pred cCcceeee-cCCCCCHHHHHHHHHHhcCEEe-----ccccCCCcccEEEEEEeeccC---CcHHHHHHHHHHHHHHhh
Confidence 1 2222 3568898888776655 57776 355567778899999876665 368899999998888764
No 84
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=1.6e-23 Score=218.45 Aligned_cols=350 Identities=13% Similarity=0.065 Sum_probs=228.2
Q ss_pred cccCeeecCCCC------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe
Q 010058 75 QWKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS 148 (519)
Q Consensus 75 ~~~~i~L~a~en------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~ 148 (519)
.++.|+|.-+++ .+++.+.+++.+.+......+ |+...+..++++.+.+++.+.+|.+.+. .+|++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~------Y~~~~G~~~lr~aia~~~~~~~~~~~~~--~~v~i 122 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNS------YSTCVGLLPARRAIAEYLSRDLPYELST--DDIYL 122 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCC------CCCCccCHHHHHHHHHHHhhccCCCCCh--hhEEE
Confidence 346788887765 247899999998886532112 3444556778877777777666654322 36999
Q ss_pred CCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCc
Q 010058 149 LSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPK 227 (519)
Q Consensus 149 ~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~k 227 (519)
|+|++ ++..++.++++|||+|+++++.+..+.. ...+.|..+..+++. ..+++.+|++++++.+++ +++
T Consensus 123 t~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~--------~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~-~~~ 192 (430)
T PLN00145 123 TAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEA--------RAVFSGLEVRHFDLL-PERGWEVDLEGVEALADE-NTV 192 (430)
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEeeCC-cccCCcCCHHHHHHHhCc-Cce
Confidence 99998 8888889999999999999976655432 223345555555432 224678999999998887 788
Q ss_pred EEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C--CCeEEEEcCCCc--ccCCCc
Q 010058 228 LIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKS--LRGPRG 295 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~--~~di~~~S~~K~--l~Gprg 295 (519)
+|+++ |+| +|...+ +++|.++|+++|+++|+|+++. .+...+....|+ . ..-+++.|++|. ++|+|.
T Consensus 193 ~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~Rl 271 (430)
T PLN00145 193 AMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYD-HLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRL 271 (430)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccch-hhccCCCCccchhhhcccCcEEEEeccccccCCCCeeE
Confidence 88887 777 888887 6778888999999999999864 333222111111 1 234778899998 589999
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
||+++.+...... ..++.+.+.... .....++.....++..++..-....+++.+++++++++.+.+.|++.
T Consensus 272 G~iv~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 343 (430)
T PLN00145 272 GWIATCDPNGILK------ETKVVDSIRNYL--NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEI 343 (430)
T ss_pred EEEEEecchhhhh------hhHHHHHHHHHh--cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999853210000 001122222221 11223344444555555553222346888899999999999999987
Q ss_pred -CCEEecCCCCcceeeeeccCC---CC-cHHHH-HHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHH
Q 010058 376 -GYDLVSGGTENHLVLVNLRNK---GI-DGSRV-EKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 376 -g~~~~~~~~~~~~~~v~~~~~---~~-~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
|+.+...+..+.++|+.+... ++ +..++ .++|++.||.+. ||.... .++++||++.. . +++++
T Consensus 344 ~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pG~~fg-~~~~lRis~~~--~----~~~l~ 412 (430)
T PLN00145 344 KCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVL----PGSALG-MKNWLRITFAI--D----PPSLE 412 (430)
T ss_pred CCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEe----CccccC-CCCeEEEEeCC--C----HHHHH
Confidence 766543334566777776421 22 34444 567778999995 665411 25799999862 3 67888
Q ss_pred HHHHHHHHHHHHH
Q 010058 450 KVAEFFDAAVKLA 462 (519)
Q Consensus 450 ~l~~~l~~~l~~~ 462 (519)
..++.|.+.+...
T Consensus 413 ~al~rl~~~~~~~ 425 (430)
T PLN00145 413 DGLERLKSFCLRH 425 (430)
T ss_pred HHHHHHHHHHHHh
Confidence 8888888877643
No 85
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.93 E-value=1.2e-23 Score=214.05 Aligned_cols=327 Identities=13% Similarity=0.085 Sum_probs=219.3
Q ss_pred eeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCcHH-
Q 010058 79 LELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 79 i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sGs~- 153 (519)
++|..+.+ ++++.+.+++.+.... . ..|+...+...+++.+.+++.+.+|+ +++. +|++|+|++
T Consensus 3 ~~~~~g~p~~~~~~~~~~~~~~~~~~-~-------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~Iiit~Gs~~ 71 (350)
T TIGR03537 3 FDFGTGDPKEPTPPFIRKALIDAVPE-V-------SQYPSALGTKALREAISGWFERRFGVKLDPDA---QVLPSAGSKE 71 (350)
T ss_pred EeccCCCCCCCCCHHHHHHHHHHHhc-c-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cEEEcCChHH
Confidence 45554444 3478888998876532 1 22444456678888888888888785 4431 699999998
Q ss_pred HHHHHHHhhcCCC---CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC-CCCCCCCHHHHHHHhhhhCCcEE
Q 010058 154 ANFQVYTALLKPH---ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD-ESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 154 a~~~~~~all~pG---D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d-~~~~~iD~d~l~~~i~~~k~klI 229 (519)
+...++.++++|| |+|+++++.|..+.. .+...|..+..++ ++ .+++.+|++++++++.+ ++|+|
T Consensus 72 ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~~~~-~~~~i 140 (350)
T TIGR03537 72 AIFHFPLVFIDPEEDRRRVIFGTPGYPVYER--------GALFAGGEPTAVK--LKKEDGFLLRLEKVEKSILE-ETKIV 140 (350)
T ss_pred HHHHHHHHHcCCCCCCceEEEcCCCCcchHH--------HHHhcCCEEEEcc--cCcccCCccCHHHHHHhhhh-ccEEE
Confidence 8887888899988 699999976655544 3344565555554 44 23567999999999887 89999
Q ss_pred EEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC--C-CCeEEEEcCCCcc--cCCCcceEE
Q 010058 230 VAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF--E-YADVVTTTTHKSL--RGPRGAMIF 299 (519)
Q Consensus 230 i~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~--~-~~di~~~S~~K~l--~GprgG~i~ 299 (519)
+++ ++| +|...+ +++|.++|+++|+++|+|+++..... .+...+.. . ...+++.|++|++ +|.|.|+++
T Consensus 141 ~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~ 219 (350)
T TIGR03537 141 WINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYF-GEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVA 219 (350)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEecccccccc-CCCCCchhhcCcCCEEEEeecccccCCccccceeee
Confidence 988 667 888787 78888889999999999999653221 11111100 1 2347778999975 688889998
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
+++ ++.+.+.....+...+.+. ....++..++. .....++.++++.++++.+.+.|.+.|+.+
T Consensus 220 ~~~--------------~~~~~~~~~~~~~~~~~~~-~~q~~~~~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~ 282 (350)
T TIGR03537 220 GDE--------------KLISFLRKLRANFGVASPD-FVQAAAKAAWS--DDNHVLERRKIFKRKRDLFIEFFNKVGLEY 282 (350)
T ss_pred cCH--------------HHHHHHHHHHHhhccCCCH-HHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 876 4454444332222122222 22233233332 223346778888999999999999988876
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
..+ ..+.++|+.+.. +.+..++.+.|.++||.+. ||.. +....+++||++. .+ ++++++.++.|++
T Consensus 283 ~~~-~g~~~~~~~~~~-~~~~~~l~~~L~~~gv~v~----~g~~f~~~~~~~~Ri~~~--~~----~~~~~~~l~~~~~ 349 (350)
T TIGR03537 283 LYP-DATFYLWVKVPS-GIDAKDYALRLLENGIVVA----PGENFGSGEEGYVRVALV--PT----LEECEEALRLWER 349 (350)
T ss_pred cCC-CeEEEEEEECCC-CCCHHHHHHHHHHCCEEEc----CchhhCCCCCCEEEEEec--CC----HHHHHHHHHHHhc
Confidence 543 335566777643 4567788888888999996 5554 2233578999974 34 6788887777654
No 86
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.93 E-value=5.8e-24 Score=216.80 Aligned_cols=311 Identities=14% Similarity=0.136 Sum_probs=205.7
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL 162 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al 162 (519)
+-+++|++|.+++.+...+ | +. .+.+.+++++++++++|.+. +.+++|++ |+..++.++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~---------~~----~~~~~~~~~~~~a~~~g~~~------~~~~~g~t~al~~al~al 80 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y---------FE----IKELVNKTGEYIANLLGVED------AVIVSSASAGIAQSVAAV 80 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C---------CC----HHHHHHHHHHHHHHhhCCCe------EEEEcCHHHHHHHHHHHH
Confidence 3456899999999988654 3 11 34556677799999999864 55666665 888899999
Q ss_pred cCCCC---------------EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCc
Q 010058 163 LKPHE---------------RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPK 227 (519)
Q Consensus 163 l~pGD---------------~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~k 227 (519)
++||| +|+++. +|...+...+ ...+.+.|..+..+ +. ++.+|++++++++++ +|+
T Consensus 81 ~~~Gd~~~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~---~~~~~~~g~~~v~v--~~---~~~~d~~~le~ai~~-~t~ 150 (363)
T TIGR01437 81 ITRGNRYLVENLHDSKIEVNEVVLPK-GHNVDYGAPV---ETMVRLGGGKVVEA--GY---ANECSAEQLEAAITE-KTA 150 (363)
T ss_pred hcCCCcchhhcccccccccceEEEEC-ccchhcCCch---HHHHHhcCCeEEEE--cC---CCCCCHHHHHHhcCh-hce
Confidence 99999 777654 2221110000 01223345444443 33 256999999999997 899
Q ss_pred EEEE-c-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeeccc
Q 010058 228 LIVA-G-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGV 304 (519)
Q Consensus 228 lIi~-~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~ 304 (519)
+|++ + ++| +|...|+++|.++|+++|+++++|++|..... ..... ++|++++|+||+|+||++|+++.++
T Consensus 151 ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~--~~~~~---g~D~~~~S~~K~l~gp~~G~l~~~~-- 223 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQ--KYYRL---GADLVIYSGAKAIEGPTSGLVLGKK-- 223 (363)
T ss_pred EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchH--HHHHc---CCCEEEEeCCcccCCCceEEEEEcH--
Confidence 7764 3 455 67899999999999999999999999862211 00011 5899999999999999999998876
Q ss_pred ccccccCcchhhhHHHHhhhcccC---CC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEE
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFP---GL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDL 379 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~---~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 379 (519)
++.+.+...... .. .++ ..++++.+|++++...+. +..++..++++.+.+.|.++ |+.+
T Consensus 224 ------------~~i~~~~~~~~~~~~~~~~~~---~~~~gl~aAl~~~~~~~~-~~~~~~~~~~~~l~~~L~~i~g~~~ 287 (363)
T TIGR01437 224 ------------KYIEWVKLQSKGIGRAMKVGK---ENILGLTAALEQYLSTGK-ESGAEMVAKLTPFIEALNTLKGVSA 287 (363)
T ss_pred ------------HHHHHHHhccCCCcceeccCH---HHHHHHHHHHHHHHccCc-ccHHHHHHHHHHHHHHHhcCCCeEE
Confidence 333332111110 01 122 346788888887654332 33445556777899999998 8887
Q ss_pred ecC--CCCc--ceeeeecc--CCCCcHHHHHHhhcccC--eEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 380 VSG--GTEN--HLVLVNLR--NKGIDGSRVEKVLESVH--IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 380 ~~~--~~~~--~~~~v~~~--~~~~~~~~~~~~L~~~g--I~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
... .... ....+.+. ..++++.++.+.|.+.| |.++..+ ...+.+|+++.. .+ ++|++.+
T Consensus 288 ~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~-------~~~~~~~l~~~~-~~----~~e~~~~ 355 (363)
T TIGR01437 288 SIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYK-------ANEGIIEIDPRS-VT----GGQLDII 355 (363)
T ss_pred EEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeee-------ecCCeEEEEeec-CC----HHHHHHH
Confidence 642 1111 11223333 24788999999998766 7776321 124578888764 33 7999999
Q ss_pred HHHHHHHH
Q 010058 452 AEFFDAAV 459 (519)
Q Consensus 452 ~~~l~~~l 459 (519)
+++|.+++
T Consensus 356 ~~~l~~~~ 363 (363)
T TIGR01437 356 VERIREIV 363 (363)
T ss_pred HHHHHHhC
Confidence 99998763
No 87
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.3e-23 Score=214.04 Aligned_cols=341 Identities=15% Similarity=0.123 Sum_probs=221.8
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcc-eEEeCCcH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGV-NVQSLSGS 152 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~-~V~~~sGs 152 (519)
.+.++|..+... +++.+.+++.+.+.+.. ...|+...+...+++.+++++.+.+|.+.+. . +|++|+|+
T Consensus 33 ~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~--~~~I~it~G~ 104 (403)
T PRK08636 33 EDIIDFSMGNPDGPTPQHIIDKLCESAQKPK------THGYSVSKGIYKLRLAICNWYKRKYNVDLDP--ETEVVATMGS 104 (403)
T ss_pred CCEEEcCCcCCCCCCCHHHHHHHHHHhcCCc------cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCeEEECCCh
Confidence 456788665443 46667777766543311 1234444666788888889998888864321 2 59999999
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHH----HHHhhh--hC
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQL----EKSAAL--FR 225 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l----~~~i~~--~k 225 (519)
+ ++..++.++++|||.|++.++.+..+.. .+...|..+..++++.+ +++.+|.+.+ ++++++ .+
T Consensus 105 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~ 175 (403)
T PRK08636 105 KEGYVHLVQAITNPGDVAIVPDPAYPIHSQ--------AFILAGGNVHKMPLEYN-EDFELDEDQFFENLEKALRESSPK 175 (403)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCEEEEEecccc-ccCccChhhhhhHHHHHHhhccCC
Confidence 8 8888999999999999999977766543 23345655555554323 3468888754 555543 36
Q ss_pred CcEEEEc-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCC---CC---CCeEEEEcCCCcc--cC
Q 010058 226 PKLIVAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP---FE---YADVVTTTTHKSL--RG 292 (519)
Q Consensus 226 ~klIi~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p---~~---~~di~~~S~~K~l--~G 292 (519)
+++|+++ |+| +|..++. ++|.++|++|++++|+|+++.. +...+....+ ++ ...+++.|++|++ +|
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~-l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 254 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYAD-ITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAG 254 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchh-hccCCCCCCChhcCCCccccEEEEEecccccCCcc
Confidence 8888888 677 8877764 6777889999999999998642 2222211111 11 2335578999986 78
Q ss_pred CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 293 PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 293 prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
.|.||+++++ ++...+.........+++...+.++ ..++... ....++.++.+.++++.+.+.|
T Consensus 255 lRiG~iv~~~--------------~li~~~~~~~~~~~~~~~~~~q~~~-~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L 318 (403)
T PRK08636 255 WRVGFVVGNK--------------KLVGALKKIKSWLDYGMFTPIQVAA-TIALDGD-QSCVEEIRETYRKRRDVLIESF 318 (403)
T ss_pred ceeeeeeCCH--------------HHHHHHHHHHHHhcccCChHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 4444443322111112333333333 3344321 2345777888899999999999
Q ss_pred HhcCCEEecCCCCcceeeeeccCC--CCcHHHHHH-hhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHH
Q 010058 373 LERGYDLVSGGTENHLVLVNLRNK--GIDGSRVEK-VLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDF 448 (519)
Q Consensus 373 ~~~g~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~-~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di 448 (519)
++.|+.+..+ ..+.++|+.+.+. +.+..++.. .+++.||.+. ||.. +....+++||++. .+ ++++
T Consensus 319 ~~~~~~~~~p-~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~----pg~~f~~~~~~~iRi~~~--~~----~~~l 387 (403)
T PRK08636 319 ANAGWELQKP-RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVS----PGIGFGEYGDEYVRIALI--EN----ENRI 387 (403)
T ss_pred HHCCCcccCC-CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEe----cchhhCcCCCCeEEEEec--CC----HHHH
Confidence 9988765543 3456778877532 234566654 5667999996 6654 3334578999985 34 6888
Q ss_pred HHHHHHHHHHHHH
Q 010058 449 EKVAEFFDAAVKL 461 (519)
Q Consensus 449 ~~l~~~l~~~l~~ 461 (519)
++.++.|.++++.
T Consensus 388 ~~~~~rl~~~l~~ 400 (403)
T PRK08636 388 RQAARNIKKFLKE 400 (403)
T ss_pred HHHHHHHHHHHHh
Confidence 8888888887754
No 88
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.93 E-value=2e-23 Score=220.99 Aligned_cols=329 Identities=14% Similarity=0.080 Sum_probs=214.5
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhc-CCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALL-KPH 166 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all-~pG 166 (519)
|..+++++.+++... + .+...|+...+..++++++.+++.+..|.+.+. .+|++|+|++ ++..++.+++ +||
T Consensus 90 P~~~~~~~~~~~~~~---~-~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~~g 163 (481)
T PTZ00377 90 PADVVARAKEYLNAI---G-GGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDP--SDIFLTDGASSGIKLLLQLLIGDPS 163 (481)
T ss_pred CHHHHHHHHHHHHhC---C-CcccCcCcccCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHHHHHHHHHHHhccCCC
Confidence 457788776655441 1 122336666778889988888888877764332 4699999998 8888888998 799
Q ss_pred CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhh-----CCcEEEEc-ccc-ccc
Q 010058 167 ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALF-----RPKLIVAG-ASA-YAR 238 (519)
Q Consensus 167 D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~-----k~klIi~~-~sn-~g~ 238 (519)
|+|+++++.+.++.. .+...|..+..++ +++ +++.+|++++++++++. ++|+|+++ |+| +|.
T Consensus 164 D~Vlv~~P~y~~y~~--------~~~~~g~~~v~v~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~ 233 (481)
T PTZ00377 164 DGVMIPIPQYPLYSA--------AITLLGGKQVPYY--LDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQ 233 (481)
T ss_pred CEEEECCCCchhHHH--------HHHHcCCEEEEEE--eccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCc
Confidence 999999976665543 3344565555554 443 35689999999998742 78887766 777 898
Q ss_pred ccc---HHHHHHHHhhcCCEEEehhhhhhhccc-cC-CCCCC------CC-C-----CeEEEEcCCCcc---cCCCcceE
Q 010058 239 LYD---YARIRKVCDKQKAVMLADMAHISGLVA-AG-VIPSP------FE-Y-----ADVVTTTTHKSL---RGPRGAMI 298 (519)
Q Consensus 239 ~~d---~~~i~~ia~~~~~~livD~ah~~g~~~-~~-~~~~p------~~-~-----~di~~~S~~K~l---~GprgG~i 298 (519)
.++ +++|.++|+++|++||+|+++.. +.. .+ ..++. +. . .-+++.|++|++ +|+|.||+
T Consensus 234 ~~s~e~~~~i~~~a~~~~~~iI~De~Y~~-l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~ 312 (481)
T PTZ00377 234 VLTRDVMEEIIKFCYEKGIVLMADEVYQE-NIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYF 312 (481)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEehhhHh-hccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEE
Confidence 887 77888899999999999998642 222 11 11110 10 1 136678999974 69999999
Q ss_pred Ee---ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh--cCH---hH----HHHHHHHHHHHH
Q 010058 299 FF---RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV--KTP---EY----KAYQEQVLSNSS 366 (519)
Q Consensus 299 ~~---~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~--~~~---~~----~~~~~~~~~~~~ 366 (519)
++ ++ ++.+++....... .+++.....++..++... ... .+ +...++++++++
T Consensus 313 ~~~~~p~--------------~li~~l~~~~~~~--~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~ 376 (481)
T PTZ00377 313 ELTNIPP--------------EVREQIYKLASIN--LCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAE 376 (481)
T ss_pred EEeCCCH--------------HHHHHHHHHhhee--cCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 87 44 5555554433211 123444444445555321 011 12 233334678889
Q ss_pred HHHHHHHhc-CCEEecCCCCcceeeeecc-CCC---------C-cHH-HHHHhhcccCeEEcccccCCCC-CC-CCCCeE
Q 010058 367 KFARSLLER-GYDLVSGGTENHLVLVNLR-NKG---------I-DGS-RVEKVLESVHIAANKNTVPGDV-SA-MVPGGI 431 (519)
Q Consensus 367 ~l~~~L~~~-g~~~~~~~~~~~~~~v~~~-~~~---------~-~~~-~~~~~L~~~gI~v~~~~~p~~~-~~-~~~~~i 431 (519)
.+.+.|.+. |+.+..+ ..++++|+++. +.+ + +.. .+...|++.||.+. ||+. +. ...+++
T Consensus 377 ~l~~~L~~~~g~~~~~p-~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~----pG~~F~~~~~~~~~ 451 (481)
T PTZ00377 377 LLTDELNKIEGVSCQPV-EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVV----PGSGFGQKPGTYHF 451 (481)
T ss_pred HHHHHHhcCCCcEeecC-CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEe----CCcccCCCCCCCEE
Confidence 999999988 8877654 33456665553 111 1 122 24567788999996 6665 22 234689
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
|+++. ++ ++++++.++.|.+++..
T Consensus 452 Rls~~--~~----~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 452 RITIL--PP----EEQIEEMVKKIKEFHES 475 (481)
T ss_pred EEEEC--CC----HHHHHHHHHHHHHHHHH
Confidence 99986 44 68899999988887763
No 89
>PRK08363 alanine aminotransferase; Validated
Probab=99.93 E-value=3.8e-23 Score=214.25 Aligned_cols=339 Identities=15% Similarity=0.135 Sum_probs=221.7
Q ss_pred ccCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 010058 76 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s 150 (519)
.+.|+|..+++ .+++.+.+++.+.+.+.. .+|+...+..++++...+++.+.+|...+. .+|.+|+
T Consensus 30 ~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~it~ 100 (398)
T PRK08363 30 IKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-------NYYGPSEGLPELREAIVKREKRKNGVDITP--DDVRVTA 100 (398)
T ss_pred CCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCcHHHHHHHHHHHHHhcCCCCCh--hhEEEeC
Confidence 35688987776 368899999988775421 234444566788877778877776753222 3699999
Q ss_pred cHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 151 GSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 151 Gs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
|++ ++..++.++++|||.|+++++.|.++.. .+...|.....++ ..+++++.+|++++++.+++ ++++|
T Consensus 101 G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~v~~~-~~~~~~~~~d~~~l~~~~~~-~~~~v 170 (398)
T PRK08363 101 AVTEALQLIFGALLDPGDEILIPGPSYPPYTG--------LVKFYGGVPVEYR-TIEEEGWQPDIDDIRKKITE-KTKAI 170 (398)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCCEEEEec-cccccCCcCCHHHHHhhCCc-ceEEE
Confidence 988 8888889999999999999977766643 1223343333331 34445678999999998876 88988
Q ss_pred EEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CCC-C-CeEEEEcCCCcc--cCCCcceE
Q 010058 230 VAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PFE-Y-ADVVTTTTHKSL--RGPRGAMI 298 (519)
Q Consensus 230 i~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~~-~-~di~~~S~~K~l--~GprgG~i 298 (519)
+++ ++| +|...+ +++|.++|+++|+++|+|+++..- ...+.... .+. . --+++.|++|++ +|.|.||+
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 249 (398)
T PRK08363 171 AVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLM-TYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYI 249 (398)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhh-ccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEE
Confidence 887 777 887776 788899999999999999996532 22221111 011 1 246678999984 78888999
Q ss_pred Ee--ecccccccccCcchhhhHHHHhhhccc--CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 299 FF--RKGVKEINKQGQEVMYAYEDKINQAVF--PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 299 ~~--~~~~~~~~~~g~~~~~~~~~~i~~~~~--~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
++ ++ ++.+.+..... .....+++.....++..++.. .....++..++++++++.+.+.|.+
T Consensus 250 ~~~~~~--------------~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~ 314 (398)
T PRK08363 250 YFVDPE--------------GKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNE 314 (398)
T ss_pred EEeCcH--------------HHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhc
Confidence 98 43 22222211110 000012233333344445543 2334577888999999999999988
Q ss_pred c-CCEEecCCCCcceeeeeccCC-CCcHHH-HHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 375 R-GYDLVSGGTENHLVLVNLRNK-GIDGSR-VEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 375 ~-g~~~~~~~~~~~~~~v~~~~~-~~~~~~-~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
+ |+.+..+ ..+++.|+.+... ..+..+ +.+.|.++||.+. ||.. +....+++||++. .+ +++++.
T Consensus 315 ~~~~~~~~p-~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~----~g~~f~~~~~~~iRis~~--~~----~~~l~~ 383 (398)
T PRK08363 315 IPGISTTKP-QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFV----HGSGFGEYGAGHFRLVFL--PP----VEILEE 383 (398)
T ss_pred CCCCEecCC-CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCeEEEEec--CC----HHHHHH
Confidence 7 7765433 3344455455431 123334 4567788999996 5554 3334578999974 34 688998
Q ss_pred HHHHHHHHHH
Q 010058 451 VAEFFDAAVK 460 (519)
Q Consensus 451 l~~~l~~~l~ 460 (519)
.++.|.++++
T Consensus 384 ~l~~l~~~~~ 393 (398)
T PRK08363 384 AMDRFEEFMR 393 (398)
T ss_pred HHHHHHHHHH
Confidence 8888888775
No 90
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7.3e-23 Score=211.87 Aligned_cols=337 Identities=17% Similarity=0.137 Sum_probs=225.1
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.++|..+++. +++.+.+++.+.+.+.. ..|+...+...+++.+.+++.+.+|...+. .+|.+++|++
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~ 101 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALDDGK-------TKYTPAAGIPELREAIAAKLKRDNGLDYDP--SQVIVTTGAK 101 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-------CCcCCCCChHHHHHHHHHHHHHHhCCCCCH--HHEEEeCCcH
Confidence 455788777664 36888899888776521 124444566788877778887776653221 3699999987
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
++..++.+++++||.|+++++.|+++.. .+...|..+..++ .++ +++.+|++++++.+.+ ++++|++
T Consensus 102 ~a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 170 (393)
T PRK05764 102 QALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGGVPVFVP--TGEENGFKLTVEQLEAAITP-KTKALIL 170 (393)
T ss_pred HHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCCEEEEEe--cCcccCCcCCHHHHHHhhCc-cceEEEE
Confidence 8888888999999999999977766533 2233455555554 342 3568999999999876 8898888
Q ss_pred c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC-------CCCCeEEEEcCCCcc--cCCCcce
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP-------FEYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p-------~~~~di~~~S~~K~l--~GprgG~ 297 (519)
+ ++| +|...+ +++|.++|++||+++++|+++.. +...+....+ ....++++.|++|++ +|+|.|+
T Consensus 171 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~ 249 (393)
T PRK05764 171 NSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEK-LVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGY 249 (393)
T ss_pred ECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccc-eeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEE
Confidence 7 666 787654 77888999999999999998643 2221111001 113578889999985 5777899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G 376 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 376 (519)
+++++ ++.+.+....... ..+++.....++..++.. ....+++..+++.++++.+.+.|++. |
T Consensus 250 i~~~~--------------~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g 313 (393)
T PRK05764 250 AAGPK--------------ELIKAMSKLQSHS-TSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPG 313 (393)
T ss_pred EecCH--------------HHHHHHHHHHhhc-ccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99877 4555444322211 123333333444445542 22345777888889999999999998 8
Q ss_pred CEEecCCCCcceeeeeccCC----CCcHHHHHHh-hcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNK----GIDGSRVEKV-LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~----~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
+.+..+ ..+.++|+++... +.+..++.+. +++.||.+. ||.... ..+++||++.. + ++++++.
T Consensus 314 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~f~-~~~~vRis~~~--~----~~~~~~~ 381 (393)
T PRK05764 314 LECPKP-EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVV----PGIAFG-APGYVRLSYAT--S----LEDLEEG 381 (393)
T ss_pred CcccCC-CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEc----cccccC-CCCEEEEEecC--C----HHHHHHH
Confidence 876653 3445666666431 1124666555 467899996 554321 15789999752 4 7999999
Q ss_pred HHHHHHHHHH
Q 010058 452 AEFFDAAVKL 461 (519)
Q Consensus 452 ~~~l~~~l~~ 461 (519)
++.|.++++.
T Consensus 382 i~~l~~~~~~ 391 (393)
T PRK05764 382 LERIERFLES 391 (393)
T ss_pred HHHHHHHHHh
Confidence 9999888763
No 91
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.93 E-value=2.2e-23 Score=209.91 Aligned_cols=318 Identities=15% Similarity=0.186 Sum_probs=228.9
Q ss_pred cCeeecCCCCCC--cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCCcHH
Q 010058 77 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ-LDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 77 ~~i~L~a~en~~--~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g-~~~~~~~~~V~~~sGs~ 153 (519)
+.++|.++||+. |+.+.+++...+.. + .-||. . ...+++ +.+++++| .+++ +|.+++|++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~-~-~rYPd------~-~~~~l~----~a~a~~~~~~~~~----~V~~gnGsd 85 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDK-L-NRYPD------P-DYRELR----AALAEYYGVVDPE----NVLVGNGSD 85 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHh-h-ccCCC------C-cHHHHH----HHHHHHhCCCCcc----eEEEcCChH
Confidence 468999999985 58889988887753 1 12333 2 223444 77888899 6653 699999999
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++++++.|||+|+++.++++.|.. .....|..+..+++ + + +.+|++.+.+.+.+ ++++|++|
T Consensus 86 e~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~--------~a~~~g~~~~~v~~--~-~-~~~d~~~~~~~~~~-~~~lv~i~ 152 (356)
T COG0079 86 ELIELLVRAFVEPGDTVLIPEPTFSMYEI--------AAQLAGAEVVKVPL--K-E-FRLDLDAILAAIRD-KTKLVFLC 152 (356)
T ss_pred HHHHHHHHHhhcCCCEEEEcCCChHHHHH--------HHHhcCCeEEEecc--c-c-cccCHHHHHHhhhc-CCCEEEEe
Confidence 8888999999999999999966655533 34456766666664 3 3 88999999999998 89999999
Q ss_pred -ccc-ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCCC-CC-eEEEEcCCCc--ccCCCcceEEeeccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPFE-YA-DVVTTTTHKS--LRGPRGAMIFFRKGV 304 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~~-~~-di~~~S~~K~--l~GprgG~i~~~~~~ 304 (519)
|+| +|...+.++|.++++.. +.+|++|+|++- .......+ .+. +- -+++-|++|. |+|.|.||+++++
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~e-F~~~~~~~-l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~-- 228 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIE-FSPESSLE-LLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP-- 228 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhh-cCCchhhh-hccCCCCEEEEEecHHhhhcchhceeeccCCH--
Confidence 777 89999988888888755 789999999542 11111100 000 22 3677788885 6899999999988
Q ss_pred ccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCE-EecCC
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYD-LVSGG 383 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~ 383 (519)
++.+.+++...|+ +.+....++..+++... ...++..+++.+.++++.+.|+.+|+. +..
T Consensus 229 ------------~~i~~l~~vr~p~---~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p-- 289 (356)
T COG0079 229 ------------ELIAALNKVRPPF---NVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFP-- 289 (356)
T ss_pred ------------HHHHHHHHhcCCC---CCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecC--
Confidence 7788887776665 22344444444444432 345888999999999999999999844 443
Q ss_pred CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+..+++++.+.. +. ...+.+.|.++||.++.+.- .+..++++||++.. ++|.++++++|.+++.
T Consensus 290 S~aNFvlv~~~~-~~-~~~l~~~L~~~giivR~~~~----~~~~~~~lRitvgt-------~een~~ll~AL~~~~~ 353 (356)
T COG0079 290 SQANFVLVRVPD-AE-AAALAEALLKKGILVRDCSS----VGLLPGYLRITVGT-------PEENDRLLAALREVLK 353 (356)
T ss_pred CCCcEEEEECCC-cc-HHHHHHHHHHCCEEEEeCCC----CCCCCCeEEEEeCC-------HHHHHHHHHHHHHHHh
Confidence 346677887654 22 45788899899999995421 12345789999653 7888999999999885
No 92
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.93 E-value=1.8e-23 Score=215.74 Aligned_cols=334 Identities=17% Similarity=0.177 Sum_probs=222.7
Q ss_pred ccCeeecCCC--CC-CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 76 WKGLELIPSE--NF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 76 ~~~i~L~a~e--n~-~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
++.|+|..++ .+ ++|.+.+++.+.+.. +...+... ....+...+.+.+++++++++|.+. .|.++||+
T Consensus 33 ~~~id~~~~~~~g~~~~~~~~~a~~~~~~~-~~~~~~~~---~~~~g~~~l~~~l~~~l~~~~g~~~-----~i~~~sG~ 103 (385)
T TIGR01825 33 KEVINLSSNNYLGFADHPRLKEAAAQAIQQ-YGVGAGAV---RTIAGTLRLHEELEEKLAKFKKTEA-----ALVFQSGF 103 (385)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHH-cCCCCCcc---CcccCCcHHHHHHHHHHHHHhCCCc-----EEEECcHH
Confidence 3568887654 34 688999999887754 32122111 2223335566677799999999653 59999998
Q ss_pred HHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh---CCcEE
Q 010058 153 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF---RPKLI 229 (519)
Q Consensus 153 ~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~---k~klI 229 (519)
++++.++.++++|||.|++.++.|+++... +.+.|.....+ ..+|++++++.+.+. ++++|
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~--------~~~~g~~~~~~--------~~~d~~~l~~~l~~~~~~~~~~v 167 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIIDG--------LRLTKATKKIY--------KHADMDDLDRVLRENPSYGKKLI 167 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHHH--------HHhcCCceEEe--------CCCCHHHHHHHHHhhccCCCeEE
Confidence 888888889999999999988777766431 22233322221 247888888877642 57888
Q ss_pred EEcc-cc-ccccccHHHHHHHHhhcCCEEEehhhhhhhcccc-CC---CCCCC-CCCeEEEEcCCCcccCCCcceEEeec
Q 010058 230 VAGA-SA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAA-GV---IPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 302 (519)
Q Consensus 230 i~~~-sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~-~~---~~~p~-~~~di~~~S~~K~l~GprgG~i~~~~ 302 (519)
++++ .+ +|...|+++|.++|++||+++|+|++|..|.... +. ...++ ...|+++.|+||++ |++||++++++
T Consensus 168 ~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~~ 246 (385)
T TIGR01825 168 VTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGHK 246 (385)
T ss_pred EEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecCH
Confidence 7773 33 7888999999999999999999999987664431 10 00011 25789999999998 45679998877
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCC-CccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQG-GPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g-~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
++.+.+.....+...+ ..+...++++.++++.+.. ..+..+++.++++++.+.|.+.|+++..
T Consensus 247 --------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 310 (385)
T TIGR01825 247 --------------ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDTGG 310 (385)
T ss_pred --------------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 4555443322222222 3345556666777765533 2346777888999999999998988765
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+.. .++.+.+.. ..+..++.+.|.+.||.++....|. .+.+...||++++..++ ++|++++++.|+++++
T Consensus 311 ~~~--~~~~~~~~~-~~~~~~~~~~L~~~gi~v~~~~~~~--~~~~~~~iRi~~~~~~~----~e~i~~~~~~l~~~~~ 380 (385)
T TIGR01825 311 SET--PITPVVIGD-EKAAQEFSRRLFDEGIFAQSIVFPT--VPRGTARIRNIPTAEHT----KDDLDQALDAYEKVGK 380 (385)
T ss_pred CCC--CEEEEEECC-HHHHHHHHHHHHHCCcEEcccCCCC--CCCCCceEEEEEcCCCC----HHHHHHHHHHHHHHHH
Confidence 422 233333321 1235567777766799985321221 12234689999888888 8999999999999875
No 93
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.93 E-value=3.8e-24 Score=218.10 Aligned_cols=299 Identities=16% Similarity=0.173 Sum_probs=199.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
....++| +.+++++|.+. .+.++||+.|+..++.++ ++|||+|+++.+.|.+.... +...|.
T Consensus 18 ~~~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~--------~~~~g~ 80 (352)
T cd00616 18 PKVREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANA--------ILLLGA 80 (352)
T ss_pred HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHH--------HHHcCC
Confidence 4455666 88889999753 367777777888888888 79999999999777665432 223354
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF 276 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~ 276 (519)
.+..+ +++++++.+|++++++.+++ ++++|+++. .+|...|+++|+++|+++|+++|+|++|..|....+.....
T Consensus 81 ~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~- 155 (352)
T cd00616 81 TPVFV--DIDPDTYNIDPELIEAAITP-RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGT- 155 (352)
T ss_pred eEEEE--ecCCCcCCcCHHHHHHhcCc-CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEccc-
Confidence 44444 45544788999999999876 899998863 37888999999999999999999999999887654321111
Q ss_pred CCCeEEEEcCC--CcccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCC--------CCc-cHHHHHHHHHH
Q 010058 277 EYADVVTTTTH--KSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQ--------GGP-HNHTISGLAVA 345 (519)
Q Consensus 277 ~~~di~~~S~~--K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~--------g~~-~~~~iaal~~a 345 (519)
..|+.++|+| |+++++.||+++++++ ++.+++......+.. ..+ ....+..+.++
T Consensus 156 -~~d~~~~S~~~~K~~~~~~gg~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa 221 (352)
T cd00616 156 -FGDAGAFSFHPTKNLTTGEGGAVVTNDE-------------ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAA 221 (352)
T ss_pred -CcceeEEcCCCCCCCcccCceEEEECCH-------------HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHH
Confidence 3577777755 9998888898888763 222222111000000 000 00011111112
Q ss_pred HHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCC----CcceeeeeccCC-CCcHHHHHHhhcccCeEEccccc
Q 010058 346 LKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGT----ENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTV 419 (519)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~ 419 (519)
+.......+++..++.+++++++.+.|.+. |++++.+.. ..+.+.+.+... +.+..++.+.|.+.||.++..+.
T Consensus 222 ~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~ 301 (352)
T cd00616 222 IGLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYP 301 (352)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecC
Confidence 222222346788889999999999999997 888765432 112333333221 46788899999999998875544
Q ss_pred CCCCCC------------------CCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 420 PGDVSA------------------MVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 420 p~~~~~------------------~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
|....+ ...+.||++++..+| ++||++++++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t----~~di~~i~~~l~ 352 (352)
T cd00616 302 PLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLT----EEEIDRVIEALR 352 (352)
T ss_pred ccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCC----HHHHHHHHHHhC
Confidence 432211 012689999999888 999999999873
No 94
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.93 E-value=9.8e-24 Score=216.62 Aligned_cols=335 Identities=14% Similarity=0.147 Sum_probs=216.4
Q ss_pred CCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-cC
Q 010058 86 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL-LK 164 (519)
Q Consensus 86 n~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al-l~ 164 (519)
+..++...+++.+.+.+.+ . +. .....++| +.+++++|.+. .|.++||+.|+..++.++ ++
T Consensus 10 p~~~~~e~~~~~~~l~~~~-------~-~~-g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~ 71 (379)
T PRK11658 10 PAMGDEELAAVKEVLRSGW-------I-TT-GPKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIG 71 (379)
T ss_pred CCCCHHHHHHHHHHHHcCC-------c-cC-CHhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCC
Confidence 3346667888888776532 1 11 24567777 88889999875 366777777888899998 89
Q ss_pred CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHH
Q 010058 165 PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYAR 244 (519)
Q Consensus 165 pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~ 244 (519)
|||+|++++++|.+.... +...|..+..+ +++++++.+|++++++++++ ++|+|+.+. .+|...|+++
T Consensus 72 ~Gd~Viv~~~~~~~~~~~--------~~~~G~~~v~v--d~~~~~~~~d~~~l~~~i~~-~tkav~~~~-~~G~~~d~~~ 139 (379)
T PRK11658 72 PGDEVITPSLTWVSTLNM--------IVLLGATPVMV--DVDRDTLMVTPEAIEAAITP-RTKAIIPVH-YAGAPADLDA 139 (379)
T ss_pred CCCEEEECCCcHHHHHHH--------HHHcCCEEEEE--ecCCCcCCcCHHHHHHhccc-CCeEEEEeC-CCCCcCCHHH
Confidence 999999999887766432 23345555554 45666778999999999987 899987542 2788899999
Q ss_pred HHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeecc-c--cccc-c-cCcchhhhHH
Q 010058 245 IRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG-V--KEIN-K-QGQEVMYAYE 319 (519)
Q Consensus 245 i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~-~--~~~~-~-~g~~~~~~~~ 319 (519)
|.++|+++|+++|+|++|+.|....+.....+ +.++++++.+|.|++++||+++++++ + ++.+ . .|... +..
T Consensus 140 i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~--~~~ 216 (379)
T PRK11658 140 IRAIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGV--DAF 216 (379)
T ss_pred HHHHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCc--chh
Confidence 99999999999999999998877654322211 45788888999999999999988753 1 1111 1 11110 000
Q ss_pred HHhhhcccCC----CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec-CCC---C-cceee
Q 010058 320 DKINQAVFPG----LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS-GGT---E-NHLVL 390 (519)
Q Consensus 320 ~~i~~~~~~~----~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~---~-~~~~~ 390 (519)
........+. ..|. +..+..+.+|+...+...+++..++.+++++.+.+.|.+.++..+. +.. . .+++.
T Consensus 217 ~~~~~~~~~~~~~~~~G~--n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 294 (379)
T PRK11658 217 DRQTQGRAPQAEVLTPGY--KYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFI 294 (379)
T ss_pred hhhcccCCCcceeecccc--ccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEE
Confidence 0000000000 0111 1123344555555555678888999999999999999887543222 211 1 13333
Q ss_pred eeccC--CCCcHHHHHHhhcccCeEEcccccCCCCCCC-C---------------CCeEEeccCccccCCCCHHHHHHHH
Q 010058 391 VNLRN--KGIDGSRVEKVLESVHIAANKNTVPGDVSAM-V---------------PGGIRMGTPALTSRGFVEEDFEKVA 452 (519)
Q Consensus 391 v~~~~--~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~-~---------------~~~iRi~~~~~ttrg~~~~di~~l~ 452 (519)
+.+.. .+.+.+++.+.|.+.||.++..+.|.+..+. . ...|.+-.+ .+++++|+++++
T Consensus 295 ~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~----~~l~~~~~~~i~ 370 (379)
T PRK11658 295 IRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLF----PDMTDADVDRVI 370 (379)
T ss_pred EEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCC----CCCCHHHHHHHH
Confidence 33322 2457888999999999988754444432111 0 111222222 356699999999
Q ss_pred HHHHHHH
Q 010058 453 EFFDAAV 459 (519)
Q Consensus 453 ~~l~~~l 459 (519)
+.|++++
T Consensus 371 ~~i~~~~ 377 (379)
T PRK11658 371 TALQQIA 377 (379)
T ss_pred HHHHHHH
Confidence 9999875
No 95
>PLN02656 tyrosine transaminase
Probab=99.93 E-value=2.5e-23 Score=216.02 Aligned_cols=350 Identities=14% Similarity=0.055 Sum_probs=228.1
Q ss_pred hcccCeeecCCCC------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEE
Q 010058 74 RQWKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQ 147 (519)
Q Consensus 74 ~~~~~i~L~a~en------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~ 147 (519)
...+.|+|..+++ .+|+.+++++.+.+..... ..|+...+..++++.+.+++.+.+|...+. .+|+
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~ 100 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKF------NGYAPTVGLPQARRAIAEYLSRDLPYKLSL--DDVF 100 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHHHhcCCCCCc--ccEE
Confidence 3456789987776 3578999999887765321 223444556678877778777776653222 3699
Q ss_pred eCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCC
Q 010058 148 SLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRP 226 (519)
Q Consensus 148 ~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~ 226 (519)
+|+|++ ++..++.++++|||+|+++++.|+.+.. .....|..+..+++. ..+++.+|++++++++++ ++
T Consensus 101 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~i~~~-~~~~~~~d~~~l~~~~~~-~~ 170 (409)
T PLN02656 101 ITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL--------CAAFRHLEVRYVDLL-PEKGWEVDLDAVEALADQ-NT 170 (409)
T ss_pred EeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH--------HHHHcCCEEEEEeCC-CcCCCCCCHHHHHHHhcc-Cc
Confidence 999998 8877888899999999999977754422 122345555555542 123568999999998876 78
Q ss_pred cEEEEc-ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C--CCeEEEEcCCCc--ccCCC
Q 010058 227 KLIVAG-ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKS--LRGPR 294 (519)
Q Consensus 227 klIi~~-~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~--~~di~~~S~~K~--l~Gpr 294 (519)
++|+++ |+| +|... ++++|.++|+++|+++|+|+++. .+...+....++ . ..-+++.|++|+ ++|+|
T Consensus 171 ~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR 249 (409)
T PLN02656 171 VALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYG-HLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWR 249 (409)
T ss_pred eEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhh-hcccCCCCcccHHHhcccCcEEEEcccchhccCccee
Confidence 887777 777 78665 57888999999999999999965 333222111111 1 234778899997 47889
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
.||++++++... .+ ..++.+++...... .++++.....++..+++......+++.+++++++++.+.+.|++
T Consensus 250 iG~~i~~~~~~~---~~---~~~~~~~~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~ 321 (409)
T PLN02656 250 LGWFVTTDPSGS---FR---DPKIVERIKKYFDI--LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE 321 (409)
T ss_pred EEEEEEeCcccc---cc---cHHHHHHHHHHHhh--hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999998531000 00 00344444332221 12344555555566665422334688888999999999999988
Q ss_pred cC-CEEecCCCCcceeeeeccC---CCC-cH-HHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHH
Q 010058 375 RG-YDLVSGGTENHLVLVNLRN---KGI-DG-SRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF 448 (519)
Q Consensus 375 ~g-~~~~~~~~~~~~~~v~~~~---~~~-~~-~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di 448 (519)
.+ +.....+..+.++|+++.. .+. +. ..+.+.|.+.||.+. ||... ..++++||++.. + ++++
T Consensus 322 ~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~----pg~~f-g~~~~iRi~~~~--~----~e~l 390 (409)
T PLN02656 322 IPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIIL----PGTAV-GLKNWLRITFAA--D----PSSL 390 (409)
T ss_pred CCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEe----cchhc-CCCCeEEEEeCC--C----HHHH
Confidence 73 3322223345667777642 122 23 335678888999996 66541 135789999873 4 6888
Q ss_pred HHHHHHHHHHHHH
Q 010058 449 EKVAEFFDAAVKL 461 (519)
Q Consensus 449 ~~l~~~l~~~l~~ 461 (519)
++.++.|.+++..
T Consensus 391 ~eal~rl~~~~~~ 403 (409)
T PLN02656 391 EEALGRIKSFYLR 403 (409)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888887753
No 96
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.8e-23 Score=213.54 Aligned_cols=318 Identities=14% Similarity=0.116 Sum_probs=217.1
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..++|+ +||.+++++.+.. . . ++|+.. ...+++ +.+++++|++++ +|++++|++
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~~-~-~-------~~Yp~~-~~~~lr----~~ia~~~~~~~~----~I~~t~Ga~ 113 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNMK-F-P-------YVYPDP-ESRRLR----AALAEDSGLESE----NILVGCGAD 113 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhhH-h-h-------ccCCCC-CHHHHH----HHHHHHhCcChh----hEEEcCCHH
Confidence 356899999885 5788888876421 1 0 123322 234455 778888999874 699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||+|+++++.++.+.. .....|..+..++. + +++.+|++++++++...++++|+++
T Consensus 114 ~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~--------~~~~~g~~~~~v~~--~-~~~~~d~~~l~~~~~~~~~~~v~l~ 182 (380)
T PLN03026 114 ELIDLLMRCVLDPGDKIIDCPPTFGMYVF--------DAAVNGAEVIKVPR--T-PDFSLDVPRIVEAVETHKPKLLFLT 182 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCEEEEeec--C-CCCCcCHHHHHHHHhccCCcEEEEe
Confidence 7777888889999999999976643321 12234555555543 3 3578999999998843489999988
Q ss_pred -ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeeccccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKE 306 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~~~~~ 306 (519)
++| +|...+.+++.++++.. +++|+|+++.. +...+.....+. ...+++.|++|.+ +|+|.||+++++
T Consensus 183 ~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~---- 256 (380)
T PLN03026 183 SPNNPDGSIISDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL---- 256 (380)
T ss_pred CCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH----
Confidence 777 89999999999999865 89999999642 221110000011 2458889999975 788999999987
Q ss_pred ccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCC
Q 010058 307 INKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG-YDLVSGGTE 385 (519)
Q Consensus 307 ~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~ 385 (519)
++.+.+.+...+. +.+.....++.++|+. ...+++.++.+.++++.+.+.|+++| +.+ .+ +.
T Consensus 257 ----------~~i~~l~~~~~~~---~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p-~~ 319 (380)
T PLN03026 257 ----------SIIEYLWRAKQPY---NVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEP-YP-SD 319 (380)
T ss_pred ----------HHHHHHHHhcCCC---CCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CC-CC
Confidence 5555555443332 2333444444445542 22347778889999999999999985 343 22 34
Q ss_pred cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 386 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 386 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+.++++.+.. +.+..++.+.|.++||.++ ++.. ....+++||++. + .+|++++.++|+++
T Consensus 320 ~~f~~~~~~~-~~~~~~~~~~l~~~gI~v~----~~~~-~~~~~~lRis~~---~----~~~~~~l~~al~~~ 379 (380)
T PLN03026 320 ANFILCRVTS-GRDAKKLKEDLAKMGVMVR----HYNS-KELKGYIRVSVG---K----PEHTDALMEALKQL 379 (380)
T ss_pred CeEEEEECCC-CCCHHHHHHHHHHCCeEEE----ECCC-CCCCCEEEEecC---C----HHHHHHHHHHHHHh
Confidence 5566776543 4567788888889999997 3332 223578999976 3 68999999998754
No 97
>PLN02187 rooty/superroot1
Probab=99.93 E-value=4.3e-23 Score=216.65 Aligned_cols=346 Identities=13% Similarity=0.087 Sum_probs=226.6
Q ss_pred ccCeeecCCCCC------CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEE
Q 010058 76 WKGLELIPSENF------TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQ 147 (519)
Q Consensus 76 ~~~i~L~a~en~------~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~ 147 (519)
++.|.|..+++. +++.+.+++.+.+.... + ..|+...+...+++.+.+++.+.+|. ++ .+|+
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~--~----~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~----~~I~ 135 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGK--G----NSYGPGAGILPARRAVADYMNRDLPHKLTP----EDIF 135 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCC--C----CCCCCCCChHHHHHHHHHHHHHhcCCCCCc----ccEE
Confidence 467888777542 45788899888776421 1 12444456778887777888776665 55 3699
Q ss_pred eCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCC
Q 010058 148 SLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRP 226 (519)
Q Consensus 148 ~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~ 226 (519)
+|+|++ ++..++.++++|||+|+++++.|..+.. .+...|..+..+++. ..+++.+|++++++++++ ++
T Consensus 136 it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~--------~~~~~g~~~~~~~l~-~~~~~~~d~~~l~~~~~~-~~ 205 (462)
T PLN02187 136 LTAGCNQGIEIVFESLARPNANILLPRPGFPHYDA--------RAAYSGLEVRKFDLL-PEKEWEIDLEGIEAIADE-NT 205 (462)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH--------HHHHcCCEEEEEeCc-cccCCccCHHHHHHhcCC-Cc
Confidence 999998 8888999999999999999977765432 233446555555542 224688999999998876 78
Q ss_pred cEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC----C-CeEEEEcCCCc--ccCCC
Q 010058 227 KLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE----Y-ADVVTTTTHKS--LRGPR 294 (519)
Q Consensus 227 klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~----~-~di~~~S~~K~--l~Gpr 294 (519)
++|+++ |+| +|..++ +++|.++|+++|++||+|+++. .+...+....++. . .-+++.|++|. ++|+|
T Consensus 206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~-~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlR 284 (462)
T PLN02187 206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYD-RTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWK 284 (462)
T ss_pred EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCceeHHHhccCCcEEEEecchhhcCCccce
Confidence 877777 777 888776 6778888999999999999964 3322221111111 1 24677899997 47899
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCC-CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPG-LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~-~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (519)
.||+++.++... .++.+.+.....+. ...+++.....++..+++......+++.++.++++++.+.+.|+
T Consensus 285 iG~~v~~~p~~~---------~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~ 355 (462)
T PLN02187 285 IGWIALNDPEGV---------FETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLK 355 (462)
T ss_pred eEEEEecCchhH---------HHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999998542000 01222332222221 11234555556666666532223458888999999999999999
Q ss_pred hcCCEE-ecCCCCcceeeeeccC---CCC-cHHH-HHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHH
Q 010058 374 ERGYDL-VSGGTENHLVLVNLRN---KGI-DGSR-VEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEED 447 (519)
Q Consensus 374 ~~g~~~-~~~~~~~~~~~v~~~~---~~~-~~~~-~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~d 447 (519)
+.+... ...+....++|+.+.. .++ +..+ +.+++.++||.+. ||.... ..++|||++.. . ++.
T Consensus 356 ~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pG~~fg-~~~~iRis~~~--~----~e~ 424 (462)
T PLN02187 356 DIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFL----PGDALG-LKNWMRITIGV--E----AHM 424 (462)
T ss_pred hCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEE----CccccC-CCCeEEEEeCC--C----HHH
Confidence 875322 2222344566665532 122 3434 4567788999996 665421 35789999763 3 678
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 448 FEKVAEFFDAAVKLA 462 (519)
Q Consensus 448 i~~l~~~l~~~l~~~ 462 (519)
++..++.|.++++..
T Consensus 425 l~~al~rL~~~l~~~ 439 (462)
T PLN02187 425 LEDALERLKGFCTRH 439 (462)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888888888654
No 98
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.93 E-value=5.9e-23 Score=212.65 Aligned_cols=329 Identities=12% Similarity=0.045 Sum_probs=218.2
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC---CCCCcceEEeCC
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD---PAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~---~~~~~~~V~~~s 150 (519)
.+.|+|..+++. +++.+.+++.+.+... ..|+...+..++++.+.+++.+.+|.+ +++ +|++|+
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~---~i~it~ 97 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDGL--------ASYPTTAGLPALREAIAAWLERRYGLPALDPAT---QVLPVN 97 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhhh--------cCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccc---eEEECC
Confidence 567888877774 4778888888766431 223434555678888888888888854 432 699999
Q ss_pred cHH-HHHHHHHhhcCC---CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhC
Q 010058 151 GSP-ANFQVYTALLKP---HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFR 225 (519)
Q Consensus 151 Gs~-a~~~~~~all~p---GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k 225 (519)
|++ ++..++.++++| ||.|+++++.+..+.. .+...|..+..+|+ ++ +++.+|++++++.+.+ +
T Consensus 98 G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~vp~--~~~~~~~~d~~~l~~~~~~-~ 166 (396)
T PRK09147 98 GSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG--------AALLAGAEPYFLNC--DPANNFAPDFDAVPAEVWA-R 166 (396)
T ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH--------HHHhcCCEEEEecc--CccccCccCHHHHHHHHhh-c
Confidence 998 888899999999 9999999866654432 23345655555554 43 3468999999988876 8
Q ss_pred CcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCC-C------C----CCeEEEEcCCC
Q 010058 226 PKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSP-F------E----YADVVTTTTHK 288 (519)
Q Consensus 226 ~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p-~------~----~~di~~~S~~K 288 (519)
+|+|+++ |+| +|..++ +++|.++|++|+++||+|+++..-. ..+. .+.+ + . .-.+++.|++|
T Consensus 167 ~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 245 (396)
T PRK09147 167 TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIY-FDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSK 245 (396)
T ss_pred cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccc-cCCCCCCchhhhhccccCccccccEEEEecccc
Confidence 9999988 777 887775 5677778899999999999964322 1111 0000 0 0 12388899999
Q ss_pred c--ccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 010058 289 S--LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSS 366 (519)
Q Consensus 289 ~--l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~ 366 (519)
. ++|.|.||+++++ ++.+.+....... ..+++.....+...++. ....+++.+++++++++
T Consensus 246 ~~~~~GlRiG~~~~~~--------------~l~~~~~~~~~~~-~~~~~~~~q~a~~~~~~--~~~~~~~~~~~~~~~~~ 308 (396)
T PRK09147 246 RSNVPGLRSGFVAGDA--------------ALLKKFLLYRTYH-GCAMPPAVQAASIAAWN--DEAHVRENRALYREKFD 308 (396)
T ss_pred ccCCccceeeeecCCH--------------HHHHHHHHHhhhc-ccCCCHHHHHHHHHHhc--chhHHHHHHHHHHHHHH
Confidence 4 6889999999987 5555444322111 11223333333333332 22345777888899999
Q ss_pred HHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHh-hcccCeEEcccccCCCC-C------CCCCCeEEeccCcc
Q 010058 367 KFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKV-LESVHIAANKNTVPGDV-S------AMVPGGIRMGTPAL 438 (519)
Q Consensus 367 ~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~-~------~~~~~~iRi~~~~~ 438 (519)
.+.+.|.+. +.+..+ ..+.++|+++. .+..++.+. |++.||.+. ||.. + ....+++||++..
T Consensus 309 ~~~~~L~~~-~~~~~p-~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~----pg~~f~~~~~~~~~~~~~iRi~~~~- 378 (396)
T PRK09147 309 AVTPILAPV-LDVQLP-DAGFYLWAKVP---GDDTEFARRLYADYNVTVL----PGSYLAREAHGVNPGAGRVRIALVA- 378 (396)
T ss_pred HHHHHHHHh-cCCCCC-CeeEEEEEECC---CCHHHHHHHHHHhCCEEEe----CCccccccccCCCCCCCeEEEEecC-
Confidence 999999875 443322 34567788775 245566555 467899996 5442 1 2235789999763
Q ss_pred ccCCCCHHHHHHHHHHHHHHH
Q 010058 439 TSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 439 ttrg~~~~di~~l~~~l~~~l 459 (519)
+ ++++++.++.|.+++
T Consensus 379 -~----~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 379 -P----LAECVEAAERIVDFC 394 (396)
T ss_pred -C----HHHHHHHHHHHHHHh
Confidence 3 577888888877665
No 99
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=5.6e-23 Score=209.28 Aligned_cols=318 Identities=14% Similarity=0.120 Sum_probs=217.0
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
..++|..+++. +|+.+.+++.+.+......+| +.. ....++ +.++++++++++ +|.+++|++
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y------~~~-~~~~lr----~~ia~~~~~~~~----~i~it~G~~~ 87 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIY------PDP-TAEKLR----EELARYCSVVPT----NIFVGNGSDE 87 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCC------CCc-cHHHHH----HHHHHHhCCCcc----cEEEecCHHH
Confidence 34778888875 588999999887653211122 221 234455 777778898874 599999998
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
++..++.++++|||+|+++++.+..+.. .....|.....++ .+ +++.+|+++++++++..++|+|+++
T Consensus 88 ~l~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~~~~k~v~l~~ 156 (351)
T PRK14807 88 IIHLIMLAFINKGDVVIYPHPSFAMYSV--------YSKIAGAVEIPVK--LK-EDYTYDVGSFIKVIEKYQPKLVFLCN 156 (351)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCCeEEEee--cC-CCCCCCHHHHHHHhhccCCCEEEEeC
Confidence 7777888899999999999876654322 1223454444444 44 3578999999999976689999888
Q ss_pred ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeecccccc
Q 010058 233 ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 307 (519)
Q Consensus 233 ~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~~~~~~ 307 (519)
++| +|...+.+++.++|++++.++|+|+++. .+. .......+. .-.+++.|++|++ +|.|.||+++++
T Consensus 157 p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~----- 229 (351)
T PRK14807 157 PNNPTGSVIEREDIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE----- 229 (351)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH-----
Confidence 777 8999999999999999889999999974 222 111111011 2358889999986 688999999877
Q ss_pred cccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCc
Q 010058 308 NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTEN 386 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 386 (519)
++.+.+.....+. ..+.....++..+++ ...+++..+++.++++.+.+.|.+. |+.+..+ ++
T Consensus 230 ---------~~~~~~~~~~~~~---~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~--~~ 292 (351)
T PRK14807 230 ---------NILKYLNLVKSPY---NINSLSQVIALKVLR---TGVLKERVNYILNERERLIKELSKIPGIKVYPS--KT 292 (351)
T ss_pred ---------HHHHHHHHccCCC---CcCHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC--Cc
Confidence 5555554432221 223333333333443 2346777788889999999999876 8776432 34
Q ss_pred ceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 387 HLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 387 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.++|+.+. +..++.+.|.++||.++. +......++++||++. + .++++++.+.|++++
T Consensus 293 ~~~~i~~~----~~~~~~~~l~~~gV~v~~----~~~~~~~~~~iRis~~---~----~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 293 NFILVKFK----DADYVYQGLLERGILVRD----FSKVEGLEGALRITVS---S----CEANDYLINGLKELL 350 (351)
T ss_pred cEEEEEcC----CHHHHHHHHHHCCEEEEE----CCCCCCCCCeEEEEcC---C----HHHHHHHHHHHHHhh
Confidence 45666653 467788888889999963 3221123578999975 3 688999999998754
No 100
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.4e-23 Score=212.59 Aligned_cols=321 Identities=17% Similarity=0.170 Sum_probs=221.4
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.++|..++|+ +|+.+++++.+.+......+||. ....+++ +.+++++|.+.+ .+|++++|++
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-------~~~~~lr----~~ia~~~~~~~~---~~I~~t~G~~ 91 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-------PRAAALK----AALRAAMGVPAG---ADVLLGNGSD 91 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-------CCHHHHH----HHHHHHhCcCCC---CcEEEcCCHH
Confidence 357899889884 68899999998775321123332 1234555 777788888653 2699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||+|+++++.+..+.. .+...|..+..++ ++ +++.+|++++++.+...++++|+++
T Consensus 92 ~~i~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~i~--~~-~~~~~d~~~l~~~~~~~~~~~v~l~ 160 (356)
T PRK04870 92 ELIQLLALACAKPGATVLAPEPGFVMYRM--------SAKLAGLEFVGVP--LT-ADFTLDLPAMLAAIAEHRPALVFLA 160 (356)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCHHHHHH--------HHHHcCCEEEEec--CC-CCCCCCHHHHHHHhhcCCCCEEEEc
Confidence 7777888889999999999866655432 2334455555554 44 3578999999999876689999988
Q ss_pred -ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCC-cccCCCcceEEeecccccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHK-SLRGPRGAMIFFRKGVKEI 307 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K-~l~GprgG~i~~~~~~~~~ 307 (519)
++| +|...+.+++.++++..++++|+|+++.. +......+ .+. ...+++.|++| .++|.|.||+++++
T Consensus 161 ~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~-~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~----- 233 (356)
T PRK04870 161 YPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQP-FAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHP----- 233 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchh-hcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCH-----
Confidence 777 89999999999888877899999998642 21111111 011 23578889999 34688889999987
Q ss_pred cccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCc
Q 010058 308 NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTEN 386 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 386 (519)
++.+.+.....+. +.+.....+...+++. ...+++..++++++++.+.+.|++. |+.+.. ..+
T Consensus 234 ---------~~i~~~~~~~~~~---~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~ 297 (356)
T PRK04870 234 ---------AWIAELDKVRPPY---NVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVFP--SAA 297 (356)
T ss_pred ---------HHHHHHHHccCCC---cCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCC
Confidence 5556555433222 2233333333334432 1236778888999999999999988 876543 234
Q ss_pred ceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 387 HLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 387 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.++|+.+. +..++.+.|.+.||.++ |+.. +...++++||++. + .++++++.++|.+++
T Consensus 298 ~~~~~~~~----~~~~~~~~l~~~gI~v~----~~~~f~~~~~~~iRis~~---~----~~~~~~l~~al~~~~ 356 (356)
T PRK04870 298 NFILVRVP----DAAAVFDGLKTRGVLVK----NLSGMHPLLANCLRVTVG---T----PEENAQFLAALKAAL 356 (356)
T ss_pred eEEEEECC----CHHHHHHHHHHCCEEEE----ECCCCCCCCCCeEEEeCC---C----HHHHHHHHHHHHHhC
Confidence 56677653 46778888999999997 4433 2234678999976 3 789999999998753
No 101
>PRK02769 histidine decarboxylase; Provisional
Probab=99.92 E-value=1.1e-22 Score=207.11 Aligned_cols=324 Identities=15% Similarity=0.102 Sum_probs=224.2
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh--cCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL--LKP 165 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al--l~p 165 (519)
+...++.+...+.+.+ |+|...+..+ ....++|+.+++++++++|+++++ ....+|||++ +|+.++.+. +.|
T Consensus 35 ~~~~~~~~~~~~~~n~--gnp~~~~~~g-~~~~~~e~~~~~~~a~l~g~~~~~--~~G~~TsGgTean~~a~~~ar~~~~ 109 (380)
T PRK02769 35 DYSALKRFFSFSINNC--GDPYSKSNYP-LNSFDFERDVMNFFAELFKIPFNE--SWGYITNGGTEGNLYGCYLARELFP 109 (380)
T ss_pred CHHHHHHHHHhhhccC--CCccccCCCC-CChHHHHHHHHHHHHHHhCCCCCC--CCEEEecChHHHHHHHHHHHHHhCC
Confidence 3455555655555545 6665532212 235678899999999999997543 1146678876 877555443 468
Q ss_pred CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEc-ccc-cccccc
Q 010058 166 HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAG-ASA-YARLYD 241 (519)
Q Consensus 166 GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~-~sn-~g~~~d 241 (519)
+++|++++.+|.+...... ..|.....++. + +++.+|+++|++++.+. +|.+|+++ .++ +|...|
T Consensus 110 ~~~ii~s~~~H~Sv~ka~~--------~lg~~~~~V~~--~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp 178 (380)
T PRK02769 110 DGTLYYSKDTHYSVSKIAR--------LLRIKSRVITS--L-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN 178 (380)
T ss_pred CcEEEeCCCceehHHHHHH--------HcCCCCceecc--C-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC
Confidence 9999999988888765432 23444444543 4 36889999999999873 38888887 555 899999
Q ss_pred HHHHHHHHhhcC---CEEEehhhhhhhccccCCCCCCCC---CCeEEEEcCCCcccCCCc-ceEEeecccccccccCcch
Q 010058 242 YARIRKVCDKQK---AVMLADMAHISGLVAAGVIPSPFE---YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEV 314 (519)
Q Consensus 242 ~~~i~~ia~~~~---~~livD~ah~~g~~~~~~~~~p~~---~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~ 314 (519)
+++|.++|+++| +++++|+||..+.++......++. ++|.+++|+||++.+|.| |+++++++....-... .
T Consensus 179 i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~--~ 256 (380)
T PRK02769 179 IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVD--V 256 (380)
T ss_pred HHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccC--c
Confidence 999999999998 699999999887765321111221 699999999999988998 9999998421000000 0
Q ss_pred hhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeecc
Q 010058 315 MYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLR 394 (519)
Q Consensus 315 ~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~ 394 (519)
++ +.. ......|+.+...++++..+++.+...++++..++..++++++.+.|++.|++++..+. ..+|.+.
T Consensus 257 --~y---l~~-~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~---~~~v~f~ 327 (380)
T PRK02769 257 --DY---IGS-RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPN---SITVVFP 327 (380)
T ss_pred --cc---cCC-CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCC---ceEEEEc
Confidence 00 000 11234588888889999999999999999999999999999999999999999886432 3344454
Q ss_pred CCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 395 NKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 395 ~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
... ..+ . .|..++. .++.+|+.+....+ .+.++.+++-|.+.+..
T Consensus 328 ~~~---~~~---~--~~w~l~~----------~~~~~hi~~~~~~~----~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 328 CPS---ERI---W--KKWHLAT----------SGNQAHIITMPHHN----KQQIDSLIDELIFDLKN 372 (380)
T ss_pred CCC---HHH---H--hCeeEcc----------cCCEEEEEECCCCC----HHHHHHHHHHHHHHHhc
Confidence 321 222 1 4555541 12479988776666 67888888888777653
No 102
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.92 E-value=1.7e-23 Score=215.41 Aligned_cols=323 Identities=18% Similarity=0.186 Sum_probs=211.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-cCCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL-LKPH 166 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al-l~pG 166 (519)
.+++.++++.+++.+.+ |.......++| +.+++++|.++ .|.++||+.|+..++.++ ++||
T Consensus 8 ~~~~~~~~v~~~~~~~~---------~~~g~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF---------LTQGPTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CCHHHHHHHHHHHhcCC---------ccCChhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence 45566777877776521 12224456666 78889999875 477888888888899998 8999
Q ss_pred CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh---hCCcEEEEccccccccccHH
Q 010058 167 ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL---FRPKLIVAGASAYARLYDYA 243 (519)
Q Consensus 167 D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~---~k~klIi~~~sn~g~~~d~~ 243 (519)
|+|+++++++.++.. .+...|..+..+ +++++++.+|++++++.+++ .+|++|+++. .+|...|++
T Consensus 70 d~Viv~~~~~~~~~~--------~~~~~G~~~~~~--~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~-~~G~~~~~~ 138 (380)
T TIGR03588 70 DRVWTTPITFVATAN--------CALYCGAKVDFV--DIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD-FAGKSVDMQ 138 (380)
T ss_pred CEEEeCCcchHHHHH--------HHHHcCCEEEEE--ecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC-CCCccCCHH
Confidence 999999977765543 223345554444 45556788999999999982 2789887642 278889999
Q ss_pred HHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC--CcccCCCcceEEeecccccccccCcchhhhHHHH
Q 010058 244 RIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDK 321 (519)
Q Consensus 244 ~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~--K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~ 321 (519)
+|.++|+++|++||+|++|+.|....+..-......|+.++|+| |+++++.||+++++++ ++.++
T Consensus 139 ~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~-------------~~~~~ 205 (380)
T TIGR03588 139 AIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE-------------ELAER 205 (380)
T ss_pred HHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccCceEEEECCH-------------HHHHH
Confidence 99999999999999999999987533311111114599999988 8898888999998764 22221
Q ss_pred hhhccc----------------C-----CCCC-CccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 322 INQAVF----------------P-----GLQG-GPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 322 i~~~~~----------------~-----~~~g-~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
+..... + ...| +..+..+.+ +.++.++ ..+++..++.+++++++.+.|.++ ++.
T Consensus 206 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~a-a~g~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~~~~ 282 (380)
T TIGR03588 206 MRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQA-ALGLSQL--KKLDRFVAKRREIAARYDRLLKDLPYFT 282 (380)
T ss_pred HHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 111000 0 0001 111112221 1222232 347888899999999999999887 344
Q ss_pred EecCC--C--CcceeeeeccC-CCCcHHHHHHhhcccCeEEcccccCCCCCC----------------CCCCeEEeccCc
Q 010058 379 LVSGG--T--ENHLVLVNLRN-KGIDGSRVEKVLESVHIAANKNTVPGDVSA----------------MVPGGIRMGTPA 437 (519)
Q Consensus 379 ~~~~~--~--~~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~----------------~~~~~iRi~~~~ 437 (519)
+..+. . ..+.+.+.+.. .+.+.+++.+.|.+.||.++..+.|.+..+ .....|++.++.
T Consensus 283 ~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~ 362 (380)
T TIGR03588 283 PLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHP 362 (380)
T ss_pred CCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCC
Confidence 33221 1 12333444432 345788899999999999886554433110 012457776665
Q ss_pred cccCCCCHHHHHHHHHHHHHHH
Q 010058 438 LTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 438 ~ttrg~~~~di~~l~~~l~~~l 459 (519)
..+ ++|++++++.|++++
T Consensus 363 ~l~----~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 363 ALT----LEQQQRVVETLRKVL 380 (380)
T ss_pred CCC----HHHHHHHHHHHHHhC
Confidence 555 899999999998764
No 103
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2.9e-23 Score=211.69 Aligned_cols=318 Identities=17% Similarity=0.201 Sum_probs=217.0
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..++|+ +++.+.+++.+.+.+.. .+|| .. ...+++ +.++++++++++ +|++|+|++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~------~~-~~~~lr----~aia~~~~~~~~----~I~it~G~~ 87 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYP------DP-NADALR----QAIAAYYGLDPE----QVFVGNGSD 87 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCC------CC-cHHHHH----HHHHHHhCCCHH----HEEEcCCHH
Confidence 356899988885 46889999988765422 1233 22 224455 777788898874 699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||+|+++++.|..+.. .....|..+..++ .+ +++.+|++++++ ++++|+++
T Consensus 88 ~al~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~-----~~~~v~~~ 151 (353)
T PRK05387 88 EVLAHAFLAFFNHDRPLLFPDITYSFYPV--------YAGLYGIPYEEIP--LD-DDFSIDVEDYLR-----PNGGIIFP 151 (353)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCHHHHHH--------HHHHcCCEEEEee--cC-CCCCCCHHHHHh-----cCCEEEEe
Confidence 8888899999999999999966644422 1233455555554 44 357899999863 35666666
Q ss_pred -ccc-ccccccHHHHHHHHhhc-CCEEEehhhhhhhccccCCCCCCC---CCCeEEEEcCCCcc--cCCCcceEEeeccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQ-KAVMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSL--RGPRGAMIFFRKGV 304 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~-~~~livD~ah~~g~~~~~~~~~p~---~~~di~~~S~~K~l--~GprgG~i~~~~~~ 304 (519)
|+| +|...+.+++.++++.+ ++++|+|++|.. + . +....++ ....+++.|++|.+ +|+|.||+++++
T Consensus 152 ~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~-~-~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~-- 226 (353)
T PRK05387 152 NPNAPTGIALPLAEIERILAANPDSVVVIDEAYVD-F-G-GESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP-- 226 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccc-c-C-CcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH--
Confidence 777 89999999999999876 999999998742 1 1 1100000 12468899999975 689999999877
Q ss_pred ccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGT 384 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 384 (519)
++.+.+..........+.+.....++..++.. ...+++.++++.++++.+.+.|++.|+.+..+
T Consensus 227 ------------~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-- 290 (353)
T PRK05387 227 ------------ELIEALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLPS-- 290 (353)
T ss_pred ------------HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECCC--
Confidence 55555543321111223444455444445532 22357788889999999999999999876432
Q ss_pred CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 385 ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 385 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..+++++.+. +.+..++.+.|.++||.++. ... +...+++|+++. + +++++++++.|++++.
T Consensus 291 ~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~----~~~-~~~~~~iRis~~---~----~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 291 KANFVFARHP--SHDAAELAAKLRERGIIVRH----FNK-PRIDQFLRITIG---T----DEEMEALVDALKEILA 352 (353)
T ss_pred cCcEEEEECC--CCCHHHHHHHHHHCCEEEEE----CCC-CCCCCeEEEEeC---C----HHHHHHHHHHHHHHhh
Confidence 3345565543 45677888889889999962 211 123578999975 3 6899999999988764
No 104
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.92 E-value=9.3e-23 Score=215.04 Aligned_cols=342 Identities=13% Similarity=0.141 Sum_probs=224.7
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCC---CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHH--
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYY---GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQV-- 158 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y---~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~-- 158 (519)
....++|.+.+++.+.-. +. +| .-| ...++..+++...++++++++|++. +.+..++|+++....
T Consensus 78 ~~~~~~p~i~~~~~~~~~--~~-~~---tpYq~e~~sqG~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~ 147 (481)
T PRK04366 78 CTMKYNPKINEKVARLPG--FA-EL---HPLQPEETVQGALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLL 147 (481)
T ss_pred cCCCCCHHHHHHHHhCcc--hh-cC---CCCCChhhhhHHHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHH
Confidence 344578888888876411 11 22 122 2345667788888899999999975 468888888744432
Q ss_pred -HH-hhcCCCC----EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 159 -YT-ALLKPHE----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 159 -~~-all~pGD----~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
+. .++++|| +|++++..|+++... +...|..++.+++ + +++.+|++++++++.+ ++++|+++
T Consensus 148 ~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~--------~~~~G~~vv~v~~--~-~~~~~D~e~L~~~i~~-~t~~V~v~ 215 (481)
T PRK04366 148 MIRAYHEARGDTKRTEVIVPDSAHGTNPAS--------AAMAGFKVVEIPS--N-EDGLVDLEALKAAVGE-DTAALMLT 215 (481)
T ss_pred HHHHHhhccCcCCCCEEEEcCCccHhHHHH--------HHHcCCEEEEeec--C-CCCCcCHHHHHhhccc-CCeEEEEe
Confidence 22 3467887 999999888777642 2344655666654 4 4578999999999987 89998888
Q ss_pred ccc-cccc-ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc------ceEEeeccc
Q 010058 233 ASA-YARL-YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG------AMIFFRKGV 304 (519)
Q Consensus 233 ~sn-~g~~-~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg------G~i~~~~~~ 304 (519)
.+| +|.. .|+++|.++|+++|+++++|+||..++... ..+. --++|++++++||+|++|.| |++.++++.
T Consensus 216 ~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~-~~~~-~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~ 293 (481)
T PRK04366 216 NPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGK-ARPG-DMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL 293 (481)
T ss_pred CCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhccc-CCcc-ccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhh
Confidence 444 7865 589999999999999999999997664321 1111 11799999999999876543 688888753
Q ss_pred c-ccc--cc---CcchhhhH--HHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 305 K-EIN--KQ---GQEVMYAY--EDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 305 ~-~~~--~~---g~~~~~~~--~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
. ..| .. |....+.+ ...+. .+ ..++.+...+.+....+..+...++++..++...++++|++.|.++
T Consensus 294 ~~~lp~~~v~~~g~~~~l~~~r~~~i~--r~--~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~- 368 (481)
T PRK04366 294 APFLPVPVVEKDGDRYRLDYDRPKSIG--RV--RAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI- 368 (481)
T ss_pred HhhCCCCeeeccCCceeecccccccCC--Cc--ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-
Confidence 1 111 11 11110011 00000 01 1123333333444444555566677888889999999999999987
Q ss_pred CEEecCCCCcceeeeec---cCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNL---RNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~---~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
+.+..++...+.++++. ...+.+..++.+.|.+.||.+.....|. ...+.+|+++...+| ++|++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~----~~~~~l~is~~e~~t----~edid~l~~ 440 (481)
T PRK04366 369 YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPL----IVPEALMIEPTETES----KETLDAFIA 440 (481)
T ss_pred CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCcccccc----ccCCeEEEcccCCCC----HHHHHHHHH
Confidence 44433222223344543 2234577889999999999875222221 124679999999999 899999999
Q ss_pred HHHHHHHHH
Q 010058 454 FFDAAVKLA 462 (519)
Q Consensus 454 ~l~~~l~~~ 462 (519)
.|.++....
T Consensus 441 ~l~~i~~~~ 449 (481)
T PRK04366 441 AMKQIAEEA 449 (481)
T ss_pred HHHHHHHHH
Confidence 999988654
No 105
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=2e-23 Score=213.34 Aligned_cols=311 Identities=13% Similarity=0.140 Sum_probs=218.6
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..+||+ +|+.+++++.+.+.+.. .||. .+..+++ +.+++++|++++ +|.+++|++
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~-------~g~~~Lr----~aia~~~~~~~~----~I~vt~Gs~ 91 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPD-------GGATTLR----QTIANKLHVKME----QVLCGSGLD 91 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCC-------CCHHHHH----HHHHHHhCCCcc----eEEECCCHH
Confidence 456899999996 58899999988765421 2332 2334455 667778899875 699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||+|+++++++..+.. .....|..+..++. + ++.+|++++++++++ ++++|+++
T Consensus 92 e~i~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~~v~~v~~--~--~~~~d~~~l~~~~~~-~~~~v~i~ 158 (366)
T PRK01533 92 EVIQIISRAVLKAGDNIVTAGATFPQYRH--------HAIIEGCEVKEVAL--N--NGVYDLDEISSVVDN-DTKIVWIC 158 (366)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCCEEEEeec--C--CCCcCHHHHHHHhCc-CCcEEEEe
Confidence 8887899999999999999976655543 23344665555553 3 356999999998876 88999888
Q ss_pred -ccc-ccccccHHHHHHHHh---hcCCEEEehhhhhhhccccCCCCCCC---C--CCeEEEEcCCCcc--cCCCcceEEe
Q 010058 233 -ASA-YARLYDYARIRKVCD---KQKAVMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSL--RGPRGAMIFF 300 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~---~~~~~livD~ah~~g~~~~~~~~~p~---~--~~di~~~S~~K~l--~GprgG~i~~ 300 (519)
|+| +|...+.+++.++++ +++ ++|+|+++. .+...+..+..+ . ...+++.|++|.+ +|.|.||+++
T Consensus 159 ~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~ 236 (366)
T PRK01533 159 NPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG 236 (366)
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC
Confidence 777 898888776666654 444 677899975 333221111111 1 2357889999975 7889999999
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhH-HHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEY-KAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
++ ++.+.+.....+ .+.+.....++..+++ ...+ ++.++...++++.+.+.|+..|+++
T Consensus 237 ~~--------------~~~~~l~~~~~~---~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~ 296 (366)
T PRK01533 237 HE--------------ELIEKLNVVRLP---FNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIPF 296 (366)
T ss_pred CH--------------HHHHHHHHhcCC---CCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 87 566666544322 2344445555555553 3334 6777788888999999998888876
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
..+ ++.++|+.+. ++.++.+.|.++||.++. . ++++||++.. .+|+++++++|++++
T Consensus 297 ~~~--~~nf~~~~~~----~~~~~~~~l~~~GI~Vr~----~------~~~iRis~~~-------~~~~~~l~~al~~~~ 353 (366)
T PRK01533 297 YQS--QTNFIFLPVE----NGGEIYEACAHAGFIIRP----F------PNGVRITVGT-------REQNEGVISVLQQHF 353 (366)
T ss_pred CCC--cCcEEEEeCC----CHHHHHHHHHHCCcEEcc----C------CCceEEeCCC-------HHHHHHHHHHHHHHH
Confidence 553 3457777763 356788888899999983 1 3579999653 799999999999887
Q ss_pred HH
Q 010058 460 KL 461 (519)
Q Consensus 460 ~~ 461 (519)
..
T Consensus 354 ~~ 355 (366)
T PRK01533 354 EN 355 (366)
T ss_pred Hh
Confidence 64
No 106
>PRK09148 aminotransferase; Validated
Probab=99.92 E-value=2e-22 Score=209.04 Aligned_cols=338 Identities=14% Similarity=0.127 Sum_probs=217.1
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD--PAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~--~~~~~~~V~~~sG 151 (519)
.+.|+|..+++. +++.+.+++.+.+.+....+ |+...+..++++.+.+++.+.+|.+ ++. +|.+|+|
T Consensus 30 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~------Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~I~it~G 100 (405)
T PRK09148 30 ADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHR------YSASKGIPGLRRAQAAYYARRFGVKLNPDT---QVVATLG 100 (405)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCC------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cEEEcCC
Confidence 456888877663 46788888877664321112 3434556678878778887777753 431 6999999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klI 229 (519)
++ ++..++.++++|||+|++++++|..+.. .....|..+..++. +.+ .+..++++..+.... ++++|
T Consensus 101 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~~v~~v~~--~~~~~~~~~l~~~~~~~~~-~~~~v 169 (405)
T PRK09148 101 SKEGFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGGVIRSVPA--EPDEEFFPALERAVRHSIP-KPIAL 169 (405)
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCCEEEEEeC--CCCCCCccCHHHHHhhccc-cceEE
Confidence 98 8888899999999999999977766533 12234555555554 322 234455544433333 78888
Q ss_pred EEc-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccC-CCCCC--C---CCCeEEEEcCCCcc--cCCCcc
Q 010058 230 VAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAG-VIPSP--F---EYADVVTTTTHKSL--RGPRGA 296 (519)
Q Consensus 230 i~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~-~~~~p--~---~~~di~~~S~~K~l--~GprgG 296 (519)
+++ |+| +|...+. ++|.++|++||+++|+|+++.. +...+ ..++. + ....+++.|++|.+ +|.|.|
T Consensus 170 ~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~-~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G 248 (405)
T PRK09148 170 IVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSE-IYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMG 248 (405)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchh-hhcCCCCCCChhhCCCccCcEEEEeccccccCCcchhee
Confidence 888 677 8888775 5777889999999999999653 22111 11111 1 12346789999976 688899
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
|+++++ ++.+.+......... +++.....++..++... ....++.+++++++++.+.+.|++.|
T Consensus 249 ~~v~~~--------------~~i~~l~~~~~~~~~-~~~~~~q~~~~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~ 312 (405)
T PRK09148 249 FAVGNE--------------RLIAALTRVKSYLDY-GAFTPIQVAATAALNGP-QDCIAEMRELYKKRRDVLVESFGRAG 312 (405)
T ss_pred eeeCCH--------------HHHHHHHHHHHHhcc-CCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999877 555555432211111 22223333334444321 23457788889999999999999988
Q ss_pred CEEecCCCCcceeeeeccCC--CCcHHHHHHh-hcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNK--GIDGSRVEKV-LESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVA 452 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~-L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~ 452 (519)
+.+..+ ..+.++|+.+... +.+..++.+. |++.||.+. ||.. +...++++||++. .+ .+++.+.+
T Consensus 313 ~~~~~p-~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~~~~~Ri~~~--~~----~~~l~~al 381 (405)
T PRK09148 313 WDIPPP-AASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVA----PGVGFGEHGDGYVRIALV--EN----EQRIRQAA 381 (405)
T ss_pred CccCCC-CeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCeEEEEec--CC----HHHHHHHH
Confidence 765433 3456677776432 1234566554 567999996 6554 2223578999885 23 57888888
Q ss_pred HHHHHHHHH
Q 010058 453 EFFDAAVKL 461 (519)
Q Consensus 453 ~~l~~~l~~ 461 (519)
+.|.+++..
T Consensus 382 ~~l~~~l~~ 390 (405)
T PRK09148 382 RNIKRFLSS 390 (405)
T ss_pred HHHHHHHHH
Confidence 887777754
No 107
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=3e-23 Score=210.20 Aligned_cols=318 Identities=18% Similarity=0.169 Sum_probs=201.0
Q ss_pred CCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHH
Q 010058 83 PSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYT 160 (519)
Q Consensus 83 a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~ 160 (519)
.+||+ +++.+++++.+.+.. . ..|+......+++ +++++++| +. ..+++++|+.++..++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~-~-------~~~~~~~~~~~l~----~~~a~~~g-~~----~~~~~~~gt~a~~~~~~ 65 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVG-D-------DVYGEDPTTAKLE----ARAAELFG-KE----AALFVPSGTAANQLALA 65 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccC-C-------cccCCCHHHHHHH----HHHHHHhC-CC----eEEEecCchHHHHHHHH
Confidence 35565 588999999875432 1 1222234444554 88889999 33 24666677778888999
Q ss_pred hhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh------hCCcEEEEc-c
Q 010058 161 ALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL------FRPKLIVAG-A 233 (519)
Q Consensus 161 all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~------~k~klIi~~-~ 233 (519)
++++|||+|++.++.|.++..... .....|..+..++ .+ ++.+|++++++++++ .++++|+++ +
T Consensus 66 ~l~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~v~--~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 66 AHTQPGGSVICHETAHIYTDEAGA-----PEFLSGVKLLPVP--GE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred HhcCCCCeEEEecCcceeeecCCc-----HHHHcCceEEeec--CC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 999999999998877765432211 1122455554544 33 367999999999874 268898888 6
Q ss_pred ccccc---cccHHHHHHHHhhcCCEEEehhhhhhhcc-ccCCCCCCC-CCCeEEEEcCCCcccCCCcceEEeeccccccc
Q 010058 234 SAYAR---LYDYARIRKVCDKQKAVMLADMAHISGLV-AAGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 308 (519)
Q Consensus 234 sn~g~---~~d~~~i~~ia~~~~~~livD~ah~~g~~-~~~~~~~p~-~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~ 308 (519)
+|+|. ..++++|.++|+++|+++++|+||..+.. ..+...... .++|+++.|+||++++|.|++++.++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~------ 210 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR------ 210 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH------
Confidence 66664 45678899999999999999999865432 112110111 26789999999999877666666666
Q ss_pred ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcce
Q 010058 309 KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHL 388 (519)
Q Consensus 309 ~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 388 (519)
++.+.+.....+. .++.....+.+ ++++..+...++.+..+++.++++++.+.|++.|+.+.. +..++
T Consensus 211 --------~~~~~~~~~~~~~-~~~~~~~~~~~-~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~ 278 (338)
T cd06502 211 --------DFIARARRRRKQA-GGGMRQSGFLA-AAGLAALENDLWLRRLRHDHEMARRLAEALEELGGLESE--VQTNI 278 (338)
T ss_pred --------HHHHHHHHHHHHh-CCChhhHHHHH-HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccCCe
Confidence 4444443321111 12222222222 223333334456777789999999999999998875433 33445
Q ss_pred eeeeccCCCCcHHHHHHhhc---ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 389 VLVNLRNKGIDGSRVEKVLE---SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 389 ~~v~~~~~~~~~~~~~~~L~---~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
+++.+.........+.+.|. +.||.+.. . ..++||++++..++ ++|++++++.+++
T Consensus 279 ~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~----~-----~~~~lRi~~~~~~~----~~~i~~~~~~l~~ 337 (338)
T cd06502 279 VLLDPVEANAVFVELSKEAIERRGEGVLFYA----W-----GEGGVRFVTHWDTT----EEDVDELLSALKA 337 (338)
T ss_pred EEEecCCccHHHHHHHHHHHHhhhCCEEEEe----c-----CCCeEEEEeecCCC----HHHHHHHHHHHhc
Confidence 55544321111122222222 57988852 1 12689999998888 8999999998864
No 108
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.2e-22 Score=210.57 Aligned_cols=336 Identities=15% Similarity=0.064 Sum_probs=224.6
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.++|..+.+. +++.+.+++.+.+.... ..|+...+..++++.+.+++++.+|...+. .+|.+|+|++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~ 103 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERGE-------TKYTLVNGTPALRKAIIAKLERRNGLHYAD--NEITVGGGAK 103 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEeCCHH
Confidence 456888877664 46888899888776421 224555667788888889999888885322 4799999987
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
|+..++.++++|||.|+++++.+.++... +...+.....++ .+. +++.+|++++++.+.+ ++++|++
T Consensus 104 ~al~~~~~~~~~~gd~vl~~~p~y~~y~~~--------~~~~~~~~~~v~--~~~~~~~~~~~~~l~~~~~~-~~~~v~l 172 (402)
T PRK06107 104 QAIFLALMATLEAGDEVIIPAPYWVSYPDM--------VLANDGTPVIVA--CPEEQGFKLTPEALEAAITP-RTRWLIL 172 (402)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcCHHHH--------HHHcCCEEEEec--CCcccCCCCCHHHHHhhcCc-CceEEEE
Confidence 87878888999999999999766655321 122233333333 332 3567999999998876 7888887
Q ss_pred c-ccc-cccccc---HHHHHHHHhhc-CCEEEehhhhhhhccccCC-CCCC------CCCCeEEEEcCCCcc--cCCCcc
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQ-KAVMLADMAHISGLVAAGV-IPSP------FEYADVVTTTTHKSL--RGPRGA 296 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~-~~~livD~ah~~g~~~~~~-~~~p------~~~~di~~~S~~K~l--~GprgG 296 (519)
+ ++| +|...+ +++|+++|+++ ++++|+|+++.. +...+. .++. ...-.+++.|++|.+ +|.|.|
T Consensus 173 ~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~-l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (402)
T PRK06107 173 NAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDH-IRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIG 251 (402)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccc-cccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccccee
Confidence 7 777 887775 56777788998 999999998642 221111 1110 012357778999986 678889
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER- 375 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 375 (519)
|+++++ ++.+.+....... ..+++.....++..++.. .....++..+.+.++++.+.+.|++.
T Consensus 252 ~~~~~~--------------~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~ 315 (402)
T PRK06107 252 YAAGPA--------------DLIAAINKLQSQS-SSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIP 315 (402)
T ss_pred eeecCH--------------HHHHHHHHHHHhc-ccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999887 4555444332111 123455555555555542 12345777888999999999999887
Q ss_pred CCEEecCCCCcceeeeeccC-------CCC---cHHHH-HHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCC
Q 010058 376 GYDLVSGGTENHLVLVNLRN-------KGI---DGSRV-EKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFV 444 (519)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~~-------~~~---~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~ 444 (519)
|+.+..+ ..+.+.|+++.. .+. +..++ ..+++++||.+. ||.... ..+++||++.. +
T Consensus 316 g~~~~~p-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~Fg-~~~~iRis~~~--~---- 383 (402)
T PRK06107 316 GLSCLVP-DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVV----QGTAYG-LSPYFRLSIAT--S---- 383 (402)
T ss_pred CCcccCC-CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEe----CccccC-CCCeEEEEeCC--C----
Confidence 7666443 345666766531 121 34454 456678999996 665411 25789999873 4
Q ss_pred HHHHHHHHHHHHHHHH
Q 010058 445 EEDFEKVAEFFDAAVK 460 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~ 460 (519)
++++++.++.|.+.+.
T Consensus 384 ~e~l~~~l~~l~~~l~ 399 (402)
T PRK06107 384 LETLEEACARIERAVA 399 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7899999988888775
No 109
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=7.8e-23 Score=212.68 Aligned_cols=345 Identities=17% Similarity=0.153 Sum_probs=224.1
Q ss_pred hcccCeeecCCCC------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--------CCC
Q 010058 74 RQWKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ--------LDP 139 (519)
Q Consensus 74 ~~~~~i~L~a~en------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g--------~~~ 139 (519)
...+.|+|..+.+ ++++.+.+++.+.+.... ...|+...+..++++.+.+++.+.++ +++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~------~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQE------CNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCC------CCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 4456788876654 368899999988766411 12344445667888777777776554 444
Q ss_pred CCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHH
Q 010058 140 AKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 140 ~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~ 218 (519)
.+|++|+|++ ++..++.++++|||+|++++++|..+... ....|..+..+++.. .+++.+|+++++
T Consensus 105 ----~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~--------~~~~g~~~~~i~~~~-~~~~~~d~~~l~ 171 (412)
T PTZ00433 105 ----DNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETV--------CKAYGIEMRFYNCRP-EKDWEADLDEIR 171 (412)
T ss_pred ----hhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHH--------HHHcCCEEEEEecCc-cccCcCCHHHHH
Confidence 3699999998 88889999999999999999777665432 233455555555421 235689999999
Q ss_pred HHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCC-CC--CCC--CCeEEEEcCCC
Q 010058 219 KSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVI-PS--PFE--YADVVTTTTHK 288 (519)
Q Consensus 219 ~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~~--p~~--~~di~~~S~~K 288 (519)
+.+.+ ++++|+++ ++| +|...+ +++|.++|+++|++||+|+++. .+...+.. +. .+. ..-+++.|++|
T Consensus 172 ~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~SfSK 249 (412)
T PTZ00433 172 RLVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA-GMVFNGATFTSVADFDTTVPRVILGGTAK 249 (412)
T ss_pred HHhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc-ccccCCCCccchhhccCCCceEEEccchh
Confidence 98876 89999887 767 786655 6777888999999999999964 33322211 11 011 22477889999
Q ss_pred cc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 010058 289 SL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSS 366 (519)
Q Consensus 289 ~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~ 366 (519)
.+ +|.|.||+++.++.... -++.+.+....... .+.+.....++..++.......+++.+++++++++
T Consensus 250 ~~~~pGlRlG~~i~~~p~~~~--------~~~~~~~~~~~~~~--~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~ 319 (412)
T PTZ00433 250 NLVVPGWRLGWLLLVDPHGNG--------GDFLDGMKRLGMLV--CGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAM 319 (412)
T ss_pred hcCCCCeeEEEEEEeCCcccH--------HHHHHHHHHHhhcc--CCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 75 78899999973210000 03444443321111 12333444444445543212345778888999999
Q ss_pred HHHHHHHhc-CCEEecCCCCcceeeeeccCC---CC-cHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCcccc
Q 010058 367 KFARSLLER-GYDLVSGGTENHLVLVNLRNK---GI-DGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTS 440 (519)
Q Consensus 367 ~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~---~~-~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~tt 440 (519)
.+.+.|++. |+.+..+ ..+.++|+.+... +. +..++.+.| +++||.+. ||.... .++++||++.. .
T Consensus 320 ~l~~~L~~~~~~~~~~p-~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~-~~~~iRis~~~--~ 391 (412)
T PTZ00433 320 VLYNHIGECIGLSPTMP-RGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVL----PGEIFH-MPGFTRLTISR--P 391 (412)
T ss_pred HHHHHHhcCCCCcccCC-CeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEe----CccccC-CCCeEEEEecC--C
Confidence 999999885 7665443 3355667665421 12 455666665 46899996 555411 25789999753 3
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 010058 441 RGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 441 rg~~~~di~~l~~~l~~~l~~ 461 (519)
++++++.++.|.++++.
T Consensus 392 ----~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 392 ----VEVLREAVERIKAFCER 408 (412)
T ss_pred ----HHHHHHHHHHHHHHHHH
Confidence 67888888888888764
No 110
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=3.4e-23 Score=210.58 Aligned_cols=313 Identities=16% Similarity=0.182 Sum_probs=214.7
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.|+|..++|+ ++|.+++++.+++.+.. +|+ .... .+++ +.+++++|++++ +|.+++|++
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--~y~------~~~~-~~lr----~~ia~~~~~~~~----~i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKLH--RYP------DPDP-AELK----QALADYYGVDPE----QILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHhh--cCC------CCCH-HHHH----HHHHHHhCcChH----HEEEcCCHHH
Confidence 46888877764 57899999998764321 232 2222 4444 778888898764 599999998
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
++..++.+++++||+|+++++.++.+.. .....|..+..++ +++ ++.+|++++++.+.+ ++++|+++
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~~--------~~~~~g~~~~~~~--~~~-~~~~d~~~l~~~~~~-~~~~v~l~~ 150 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTYSMYEI--------SAKIHGAEVVKVP--LDE-DGQLDLEDILVAIDD-KPKLVFLCS 150 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCHHHHHH--------HHHHcCCeEEEec--cCC-CCCCCHHHHHHhcCC-CCCEEEEeC
Confidence 7777888899999999999876543321 1223354444444 443 478999999998765 89999988
Q ss_pred ccc-ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCC--CCCeEEEEcCCCcc--cCCCcceEEeecccc
Q 010058 233 ASA-YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPF--EYADVVTTTTHKSL--RGPRGAMIFFRKGVK 305 (519)
Q Consensus 233 ~sn-~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~--~~~di~~~S~~K~l--~GprgG~i~~~~~~~ 305 (519)
++| +|...+.+++.++|+.+ ++++|+|++|. ++...+.....+ ...++++.|++|++ +|+|.|++++++
T Consensus 151 p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--- 226 (346)
T TIGR01141 151 PNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--- 226 (346)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH---
Confidence 666 89999999999999887 99999999976 222111000000 02357788999997 477789999987
Q ss_pred cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCC
Q 010058 306 EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGT 384 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 384 (519)
++.+++.....+ .+.+...+.+...+++.. ..+++..+++.++++.+.+.|.+. |+.+..+
T Consensus 227 -----------~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-- 288 (346)
T TIGR01141 227 -----------EIIDALNKVRAP---FNLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYPS-- 288 (346)
T ss_pred -----------HHHHHHHhccCC---CCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC--
Confidence 555555443222 122333444434444322 136788899999999999999988 8875442
Q ss_pred CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 385 ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 385 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
...++++.+.. ++.++.+.|.++||.+. |+.. +.. ++++|++++ + ++|++++++.|
T Consensus 289 ~g~~~~~~~~~---~~~~~~~~L~~~gI~v~----~g~~f~~~-~~~iRls~~---~----~~~i~~~~~~l 345 (346)
T TIGR01141 289 DANFVLIRFPR---DADALFEALLEKGIIVR----DLNSYPGL-PNCLRITVG---T----REENDRFLAAL 345 (346)
T ss_pred cCCEEEEecCC---CHHHHHHHHHHCCeEEE----eCCCcCCC-CCeEEEecC---C----HHHHHHHHHHh
Confidence 34566776542 57788888889999997 5543 122 678999965 4 78999998876
No 111
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=1.8e-22 Score=208.90 Aligned_cols=329 Identities=13% Similarity=0.064 Sum_probs=215.3
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC----CCCCcceEEeC
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD----PAKWGVNVQSL 149 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~----~~~~~~~V~~~ 149 (519)
.+.++|..+++. +++.+.+++.+.+... ..|+...+..++++.+.+++.+.+|.+ +++ +|++|
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~--------~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~---~i~it 96 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENLHGL--------STYPTTKGLPELRQAIARWLERRFDLPTGVDPER---HVLPV 96 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhcc--------CCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCc---eEEEC
Confidence 567889888775 5788899988765431 223444556778877778888877653 322 69999
Q ss_pred CcHH-HHHHHHHhhcCCCCE--EEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhC
Q 010058 150 SGSP-ANFQVYTALLKPHER--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFR 225 (519)
Q Consensus 150 sGs~-a~~~~~~all~pGD~--Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k 225 (519)
+|++ ++..++.++++|||. |+++++.+..+.. .+...|..+..++ ++++ ++.+|++++++++.+ +
T Consensus 97 ~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~~~~-~ 165 (393)
T TIGR03538 97 NGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG--------AALLAGAEPYFLN--CTAENGFLPDFDAVPESVWR-R 165 (393)
T ss_pred CCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH--------HHHhcCCeEEEee--ccccCCCCCCHHHHHHHHhh-c
Confidence 9998 888888999999996 8888765544432 2233455555554 4433 467899999998876 8
Q ss_pred CcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccC-CCCCC------CC----CCeEEEEcCCCc
Q 010058 226 PKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAG-VIPSP------FE----YADVVTTTTHKS 289 (519)
Q Consensus 226 ~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~-~~~~p------~~----~~di~~~S~~K~ 289 (519)
+|+|+++ ++| +|...+ +++|.++|+++|++||+|+++..-....+ ..++. .. .--+++.|++|.
T Consensus 166 ~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~ 245 (393)
T TIGR03538 166 CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKR 245 (393)
T ss_pred ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhh
Confidence 9999887 777 887777 67788888999999999999653211111 11100 00 123788999995
Q ss_pred --ccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHH
Q 010058 290 --LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSK 367 (519)
Q Consensus 290 --l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~ 367 (519)
++|.|.||+++++ ++.+++........ .+.+.....++..++. ....+++..++++++++.
T Consensus 246 ~~~~GlRvG~~i~~~--------------~l~~~~~~~~~~~~-~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~ 308 (393)
T TIGR03538 246 SNLPGLRSGFVAGDA--------------EILKAFLRYRTYHG-CAMPIPTQLASIAAWN--DEQHVRENRALYREKFAA 308 (393)
T ss_pred cCCcccceEEEecCH--------------HHHHHHHHHHHhhc-cCcCHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHH
Confidence 5899999999987 45554443221111 1223333333333332 123457778888999999
Q ss_pred HHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-C------CCCCCeEEeccCccc
Q 010058 368 FARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-S------AMVPGGIRMGTPALT 439 (519)
Q Consensus 368 l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~------~~~~~~iRi~~~~~t 439 (519)
+.+.|++. +.+..+ ..+.++|+++. .+..++.+.| +++||.+. ||.. . ....+++||++..
T Consensus 309 ~~~~L~~~-~~~~~p-~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~----pg~~f~~~~~~~~~~~~~~Ris~~~-- 377 (393)
T TIGR03538 309 VLEILGQV-LDLELP-DAGFYLWPKVP---GDDEAFARALYEEENVTVL----PGRFLAREAEGVNPGEGRVRIALVA-- 377 (393)
T ss_pred HHHHHHhh-CcccCC-CeeEEEEEECC---CCHHHHHHHHHHHCCEEEe----CCccccccccCCCCCCCEEEEEecC--
Confidence 99999875 333222 34567777765 2456666655 67899996 5443 1 2235789999763
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 010058 440 SRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 440 trg~~~~di~~l~~~l~~~ 458 (519)
+ ++++++.++.|.+.
T Consensus 378 ~----~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 378 P----LEECVEAAERIRSF 392 (393)
T ss_pred C----HHHHHHHHHHHHHh
Confidence 3 67888877777653
No 112
>PLN02721 threonine aldolase
Probab=99.92 E-value=5.4e-23 Score=209.67 Aligned_cols=325 Identities=18% Similarity=0.182 Sum_probs=206.0
Q ss_pred eeecCCCCC-CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHH
Q 010058 79 LELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQ 157 (519)
Q Consensus 79 i~L~a~en~-~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~ 157 (519)
++|..+++. +++.+++++...-.+ ....+|. ...+++| +.+++++|.+. .+.+++|+.++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~a~~~~~~~------~~~~~~~--~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~~ 70 (353)
T PLN02721 8 VDLRSDTVTKPTDAMRAAMANAEVD------DDVLGYD--PTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNLI 70 (353)
T ss_pred hhhhcccccCCCHHHHHHHHhccCC------CcccCCC--HHHHHHH----HHHHHHhCCce-----eEEecCccHHHHH
Confidence 566666553 578888888653111 1112232 3355666 78888999875 3777889888777
Q ss_pred HHHhhcC-CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh------hCCcEEE
Q 010058 158 VYTALLK-PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL------FRPKLIV 230 (519)
Q Consensus 158 ~~~all~-pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~------~k~klIi 230 (519)
++.++++ |||+|++.+++|.+....+. .....|.....++ .+ +++.+|+|++++.+++ .++++|+
T Consensus 71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 71 SVLVHCDVRGSEVILGDNSHIHLYENGG-----ISTLGGVHPRTVK--NN-EDGTMDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred HHHHHccCCCCeEEEcCccceehhcccc-----hhhhcCceeEecC--CC-cCCCcCHHHHHHHHHhccCCCCCcceEEE
Confidence 8888887 99999999876533221110 1223354444444 34 4578999999999973 2789999
Q ss_pred Ec-cc-c-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccc-cCCCCCC-CCCCeEEEEcCCCcccCCCcceEEeec
Q 010058 231 AG-AS-A-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVA-AGVIPSP-FEYADVVTTTTHKSLRGPRGAMIFFRK 302 (519)
Q Consensus 231 ~~-~s-n-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~-~~~~~~p-~~~~di~~~S~~K~l~GprgG~i~~~~ 302 (519)
++ ++ | +|...| +++|.++|+++|+++++|++|..+... .+..+.. ..++|.++.|+||++++|.||+++.++
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 222 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSK 222 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCH
Confidence 86 33 3 466655 789999999999999999998655321 1222211 126889999999999887766666666
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEE-e
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDL-V 380 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~ 380 (519)
++.+.+...... ..+++......+. +++..+. .+.+..++..++++.+.+.|.++ |+.+ +
T Consensus 223 --------------~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 284 (353)
T PLN02721 223 --------------SFIRKAKRLRKT-LGGGMRQVGVLAA-AALVALQ--ENVPKLEDDHKKAKLLAEGLNQIKGLRVNV 284 (353)
T ss_pred --------------HHHHhHHHHHHh-cCCCeehhHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCCcEEec
Confidence 444432221111 1122221111111 1222111 12223445567788999999988 7754 3
Q ss_pred cCCCCcceeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 381 SGGTENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 381 ~~~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.+ ...+++++.+... +.+...+.+.|.++||.++ |+ ..++||++++..++ ++|++++++.|++++
T Consensus 285 ~~-~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~----~~-----~~~~lR~~~~~~~~----~~~i~~~~~~l~~~~ 350 (353)
T PLN02721 285 AA-VETNIVYFDITDGSRITAEKLCKSLEEHGVLLM----PG-----NSSRIRVVTHHQIS----DSDVQYTLSCFQQAA 350 (353)
T ss_pred CC-ccceEEEEEccCCccccHHHHHHHHHhCCcEEe----cC-----CCceEEEEecCcCC----HHHHHHHHHHHHHHh
Confidence 33 2344566665431 2467789999999999997 43 24689999887777 899999999999876
Q ss_pred H
Q 010058 460 K 460 (519)
Q Consensus 460 ~ 460 (519)
.
T Consensus 351 ~ 351 (353)
T PLN02721 351 L 351 (353)
T ss_pred h
Confidence 4
No 113
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=5.6e-23 Score=210.74 Aligned_cols=319 Identities=15% Similarity=0.137 Sum_probs=218.8
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.++|..++|+ +++.+++++.+.+.. + ..||.. .+ ..++ +.+++++|++++ +|.+++|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~------~~-~~lr----~~ia~~~~~~~~----~i~~t~G~~ 94 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG------SG-FELK----AALAEKFGVDPE----RIILGNGSD 94 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------cH-HHHH----HHHHHHhCcCHH----HEEEcCCHH
Confidence 456888888775 578899998887653 2 134332 22 3455 777788898774 699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.+++++||+|++.++.|..+.. .....|..+..++ . +++.+|++++++.+.+ ++++|+++
T Consensus 95 ~~l~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~--~~~~~~~~~l~~~~~~-~~~~v~l~ 161 (367)
T PRK02731 95 EILELLARAYLGPGDEVIYSEHGFAVYPI--------AAQAVGAKPVEVP--A--KDYGHDLDAMLAAVTP-RTRLVFIA 161 (367)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCHHHHHH--------HHHHcCCeEEEec--c--cCCCCCHHHHHHHhCC-CCcEEEEe
Confidence 6666778889999999999876644321 1123355444444 3 3578999999999876 89999888
Q ss_pred -ccc-ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCC-----CCCeEEEEcCCCcc--cCCCcceEEee
Q 010058 233 -ASA-YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPF-----EYADVVTTTTHKSL--RGPRGAMIFFR 301 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~-----~~~di~~~S~~K~l--~GprgG~i~~~ 301 (519)
++| +|...+.+++.++|+.+ |+++++|+++..... .+....++ ....+++.|.+|.+ +|+|.||++++
T Consensus 162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~ 240 (367)
T PRK02731 162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVR-RKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP 240 (367)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhcc-CcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC
Confidence 777 89999999999999875 899999999654322 11111111 12357778999975 67888999998
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh-HHHHHHHHHHHHHHHHHHHHhcCCEEe
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE-YKAYQEQVLSNSSKFARSLLERGYDLV 380 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~ 380 (519)
+ ++.+.+.....+. ..+.....++..++ .... +++..+.++++++.+.+.|++.|+.+.
T Consensus 241 ~--------------~~~~~l~~~~~~~---~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 300 (367)
T PRK02731 241 P--------------EIIDALNRVRQPF---NVNSLALAAAVAAL---DDDAFVEKSRALNAEGMAWLTEFLAELGLEYI 300 (367)
T ss_pred H--------------HHHHHHHHccCCC---CCCHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence 7 5555554432221 12233333333333 3333 477788889999999999999887765
Q ss_pred cCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 381 SGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 381 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
. ....++|+.+ +.+.+..++.+.|.++||.++ |+... ..+++||+++. + .+|+++++++|+++++
T Consensus 301 ~--~~g~~~~i~~-~~~~~~~~~~~~L~~~gI~v~----~~~~~-~~~~~iRis~~---~----~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 301 P--SVGNFILVDF-DDGKDAAEAYQALLKRGVIVR----PVAGY-GLPNALRITIG---T----EEENRRFLAALKEFLA 365 (367)
T ss_pred C--CCceEEEEEC-CCCCCHHHHHHHHHHCCEEEE----eCCCC-CCCCeEEEecC---C----HHHHHHHHHHHHHHHh
Confidence 3 2345677776 334577888888988999997 33321 12568999975 3 6899999999998764
No 114
>PLN02822 serine palmitoyltransferase
Probab=99.92 E-value=5.7e-23 Score=216.30 Aligned_cols=337 Identities=16% Similarity=0.150 Sum_probs=220.5
Q ss_pred cCeeecCCCC---CCcHHHHHHHhhHhhhccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 77 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en---~~~~~V~ea~~~~l~~~~~~g~p~~~~-y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
+.|+|..+.. ..+|.+.+++.+.+.+ |..|+.+.|. |+..+...++| +.+++++|.+. .|.+++|.
T Consensus 110 ~~id~~s~~~lgl~~~~~i~ea~~~al~~-~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G~ 179 (481)
T PLN02822 110 DVVNFASANYLGLIGNEKIKESCTSALEK-YGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYGL 179 (481)
T ss_pred eEEEeECCCcCCCCCCHHHHHHHHHHHHH-hCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCHH
Confidence 3466653322 2489999999999876 6556666554 56666666676 88889998653 49999998
Q ss_pred HHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh--------h
Q 010058 153 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL--------F 224 (519)
Q Consensus 153 ~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~--------~ 224 (519)
+++.+++.+++++||.|++....|++... ++.+.+..+..++ .+ |.++++..+.+ .
T Consensus 180 ~a~~sai~a~~~~gd~Ii~d~~~H~s~~~--------~~~ls~~~~~~~~--~n------d~~~l~~~l~~~~~~~~~~~ 243 (481)
T PLN02822 180 STIFSVIPAFCKKGDIIVADEGVHWGIQN--------GLYLSRSTIVYFK--HN------DMESLRNTLEKLTAENKRKK 243 (481)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCccHHHHH--------HHHHcCCeEEEEC--CC------CHHHHHHHHHHHhhhhcccC
Confidence 88888999999999999977655544422 3334444443332 22 33344333321 1
Q ss_pred CC-cEEEEc--cccccccccHHHHHHHHhhcCCEEEehhhhhhhcccc-C--CCC-CCC--CCCeEEEEcCCCcccCCCc
Q 010058 225 RP-KLIVAG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAA-G--VIP-SPF--EYADVVTTTTHKSLRGPRG 295 (519)
Q Consensus 225 k~-klIi~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~-~--~~~-~p~--~~~di~~~S~~K~l~Gprg 295 (519)
++ ++|++. .+++|...|+++|+++|++||+++|+|++|..|.+.. + ... ..+ ...|++++|++|+++ ..|
T Consensus 244 ~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg-~~G 322 (481)
T PLN02822 244 KLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA-TEG 322 (481)
T ss_pred CCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-hCC
Confidence 34 677776 4558999999999999999999999999998775431 1 100 011 257999999999984 567
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCc-cHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGP-HNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~-~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
|++++++ ++.+.+.........++. +....+|..++++.+.. ..+..++++++++++.+.|.+
T Consensus 323 G~i~g~~--------------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~ 386 (481)
T PLN02822 323 GFCTGSA--------------RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSD 386 (481)
T ss_pred eEEEcCH--------------HHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHh
Confidence 9999887 455544332222222222 22333333457765432 356788999999999999998
Q ss_pred c-CCEEecCCCCcceeeeeccCC-CC---c---HHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCH
Q 010058 375 R-GYDLVSGGTENHLVLVNLRNK-GI---D---GSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVE 445 (519)
Q Consensus 375 ~-g~~~~~~~~~~~~~~v~~~~~-~~---~---~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~ 445 (519)
. |+.+..+ ..+.++++.+... +. + ..++.+.| +++||.+.....|.-.....+.++|+++...++ +
T Consensus 387 ~~g~~~~~~-~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t----~ 461 (481)
T PLN02822 387 IPGLSIGSN-TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHT----E 461 (481)
T ss_pred cCCcccCCC-CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCC----H
Confidence 7 8877543 2455666666421 10 1 23456655 588999974222221111124579998877777 8
Q ss_pred HHHHHHHHHHHHHHHH
Q 010058 446 EDFEKVAEFFDAAVKL 461 (519)
Q Consensus 446 ~di~~l~~~l~~~l~~ 461 (519)
+|++++++.|++++..
T Consensus 462 edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 462 SDILKASESLKRVAAS 477 (481)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988764
No 115
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=1.3e-22 Score=210.71 Aligned_cols=348 Identities=12% Similarity=0.054 Sum_probs=222.7
Q ss_pred hcccCeeecCCCC------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEE
Q 010058 74 RQWKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQ 147 (519)
Q Consensus 74 ~~~~~i~L~a~en------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~ 147 (519)
.+.+.|+|..++. .+|+.+.+++.+.+.+... ..|+...+..++++++.+++.+.+|.+.+. .+|+
T Consensus 30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~--~~I~ 101 (409)
T PLN00143 30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKF------NSYAPTGGILPARRAIADYLSNDLPYQLSP--DDVY 101 (409)
T ss_pred CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCC------CCCCCCCCCHHHHHHHHHHHHhhcCCCCCH--hhEE
Confidence 3456788876665 4688888999887765211 123333455678877778887776653222 3699
Q ss_pred eCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCC
Q 010058 148 SLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRP 226 (519)
Q Consensus 148 ~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~ 226 (519)
+|+|++ ++..++.++++|||.|++.++.+..+.. .....|..+..+++. +.+++.+|++++++++.+ ++
T Consensus 102 it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~--------~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~-~~ 171 (409)
T PLN00143 102 LTLGCKHAAEIIIKVLARPEANILLPRPGFPDVET--------YAIFHHLEIRHFDLL-PEKGWEVDLDAVEAIADE-NT 171 (409)
T ss_pred EecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH--------HHHHcCCEEEEEecc-CCCCCcCCHHHHHHhccc-CC
Confidence 999998 8888999999999999999977665533 223345444444432 224568999999998876 67
Q ss_pred cEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C--CCeEEEEcCCCc--ccCCC
Q 010058 227 KLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKS--LRGPR 294 (519)
Q Consensus 227 klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~--~~di~~~S~~K~--l~Gpr 294 (519)
++++++ |+| +|..++ +++|.++|+++++++|+|+++. .+...+....|+ . ..-+++.|++|. ++|+|
T Consensus 172 ~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR 250 (409)
T PLN00143 172 IAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYG-HIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWG 250 (409)
T ss_pred EEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcccc-ccccCCCCCcchhhhcccCcEEEEccchhhcCCCccc
Confidence 777766 877 888877 5677788999999999999954 333222111111 1 124778899997 58899
Q ss_pred cceEEeec-c-cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 295 GAMIFFRK-G-VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 295 gG~i~~~~-~-~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
.||+++++ + ... ..+..+.+.....+.. . ++.....++..++.......+++.+++++++++.+.+.|
T Consensus 251 vG~~v~~~p~~~~~--------~~~~~~~~~~~~~~~~-~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L 320 (409)
T PLN00143 251 LGWLVTCDPSGLLQ--------ICEIADSIKKALNPAP-F-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKL 320 (409)
T ss_pred eEEEEeeCchhhhh--------hHHHHHHHHHHHhccC-C-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999843 1 100 0011222222221111 1 133344444445542112346888889999999999999
Q ss_pred HhcCCEE-ecCCCCcceeeeeccCC---CC-cHHHH-HHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHH
Q 010058 373 LERGYDL-VSGGTENHLVLVNLRNK---GI-DGSRV-EKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 373 ~~~g~~~-~~~~~~~~~~~v~~~~~---~~-~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
.+.+... ...+..+.++|+++... ++ +..++ .+++.+.||.+. ||... ...+++||++. ++ ++
T Consensus 321 ~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f-~~~~~iRi~~~--~~----~~ 389 (409)
T PLN00143 321 KEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIIL----PGVTV-GLKNWLRITFA--VE----QS 389 (409)
T ss_pred hcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEe----Ccccc-CCCCeEEEEEc--CC----HH
Confidence 8874322 22233456778877531 22 34444 466688999996 66542 13578999976 33 68
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVKL 461 (519)
Q Consensus 447 di~~l~~~l~~~l~~ 461 (519)
++++.++.|.++++.
T Consensus 390 ~l~~al~rl~~~l~~ 404 (409)
T PLN00143 390 SLEDGLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888887753
No 116
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=6.7e-23 Score=209.54 Aligned_cols=314 Identities=16% Similarity=0.150 Sum_probs=217.5
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.++|..++|+ +++.+++++.+.+.. . .||+. .+..+++ +.++++++++++ +|++++|++
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-------~~~p~-~g~~~lr----~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-L-------ALYPD-GYAPELR----TKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-h-------hcCCC-CcHHHHH----HHHHHHhCCCHH----HEEECCCHHH
Confidence 56888888875 578899998877654 2 12221 2344555 777778888774 699999998
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
++..++.+++++||+|+++++.++++.. .....|..+..+++ + ++.+|++++++.+.+ ++++|+++
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~~--------~~~~~g~~~~~~~~--~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYRH--------NAIIEGAEVREVPL--K--DGGHDLEAMLKAIDE-QTKIVWICN 159 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHHH--------HHHHcCCeEEEEec--C--CCCcCHHHHHHhcCC-CCCEEEEeC
Confidence 7777888899999999999977655432 12233555555554 3 367899999998876 89998877
Q ss_pred ccc-ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCCCC-----CCeEEEEcCCCcc--cCCCcceEEeec
Q 010058 233 ASA-YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSL--RGPRGAMIFFRK 302 (519)
Q Consensus 233 ~sn-~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p~~-----~~di~~~S~~K~l--~GprgG~i~~~~ 302 (519)
++| +|...+.+++.++++. +|+++|+|+++..... .+..+.++. ...+++.|++|.+ +|.|.||+++++
T Consensus 160 p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 160 PNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVT-AEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcC-CcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 777 8999999999998877 5999999999754322 111111110 2468888999986 588889999987
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh-HHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE-YKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
++.+.+.....+ . +.+.....++..+++ ... .++..+.++++++.+.+.|.+.|+.++.
T Consensus 239 --------------~~~~~~~~~~~~--~-~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 298 (359)
T PRK03158 239 --------------ELIEKLNIARPP--F-NTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYGLFYYP 298 (359)
T ss_pred --------------HHHHHHHHhcCC--C-CCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCeeCC
Confidence 555555543322 1 234444444444443 333 4666777888889999999888887654
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+ ...++|+.+. .+..++.+.|.+.||.+. ||+... .+++|||++. + .+|+++++++|+++
T Consensus 299 ~--~g~~i~~~~~---~~~~~~~~~l~~~gv~v~----~g~~f~-~~~~iRi~~~---~----~~~~~~l~~al~~~ 358 (359)
T PRK03158 299 S--QTNFIFVDTG---RDANELFEALLKKGYIVR----SGAALG-FPTGVRITIG---L----KEQNDKIIELLKEL 358 (359)
T ss_pred C--cCcEEEEECC---CCHHHHHHHHHHCCeEEe----eCCCCC-CCCeEEEecC---C----HHHHHHHHHHHHHh
Confidence 3 2346666652 356778888878999997 554311 2578999965 3 79999999999875
No 117
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=9.9e-23 Score=208.93 Aligned_cols=324 Identities=15% Similarity=0.129 Sum_probs=220.6
Q ss_pred CeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 78 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 78 ~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
.++|..++|+ +|+.+++++.+.+.... .....|+. .+...+++.+.+++.+.+|.+.+. .+|++|+|++ +
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~----~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~--~~I~it~G~~~~ 100 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAA----AGLNRYPD-RDAVALRADLAAYLTAQTGVGLTV--ENVWAANGSNEI 100 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhh----hhhccCCC-CchHHHHHHHHHHhhhhccCCCCh--hhEEECCCHHHH
Confidence 5889888885 57889999988765311 00122332 234678877778887777753222 4699999998 8
Q ss_pred HHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-c
Q 010058 155 NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-A 233 (519)
Q Consensus 155 ~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~ 233 (519)
+..++.++++|||.|++.++.|..+.. .....|.. .++++.+ +++.+|++++++++.+.++++|+++ +
T Consensus 101 l~~~~~~~~~~gd~v~v~~P~y~~~~~--------~~~~~g~~--~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~l~~p 169 (368)
T PRK03317 101 LQQLLQAFGGPGRTALGFVPSYSMHPI--------IARGTHTE--WVEGPRA-ADFTLDVDAAVAAIAEHRPDVVFLTSP 169 (368)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHhcCCe--eEEcccC-CCCCCCHHHHHHHHhccCCCEEEEeCC
Confidence 888899999999999999977655532 12223333 3333333 4578999999999876688988877 7
Q ss_pred cc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC----C-CeEEEEcCCCcc--cCCCcceEEeecccc
Q 010058 234 SA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE----Y-ADVVTTTTHKSL--RGPRGAMIFFRKGVK 305 (519)
Q Consensus 234 sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~----~-~di~~~S~~K~l--~GprgG~i~~~~~~~ 305 (519)
+| +|...+.+++.++|+..++++|+|++|.. +...+. +..+. + -.+++.|++|.+ +|.|.|++++++
T Consensus 170 ~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~-~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--- 244 (368)
T PRK03317 170 NNPTGTALPLDDVEAILDAAPGIVVVDEAYAE-FRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--- 244 (368)
T ss_pred CCCCCCCCCHHHHHHHHHHCCceEEEeCCchh-hcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH---
Confidence 66 89999999999999999999999999763 221121 11110 1 236777999976 588889999987
Q ss_pred cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCC
Q 010058 306 EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTE 385 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 385 (519)
++.+.+.....+. +.+....++...+++.. ..+.+..+++.++++.+.+.|++.|+.+..+ ..
T Consensus 245 -----------~~~~~l~~~~~~~---~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~ 307 (368)
T PRK03317 245 -----------AVVDALRLVRLPY---HLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVAPS-DA 307 (368)
T ss_pred -----------HHHHHHHhcCCCC---CCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeCCC-CC
Confidence 5666555433221 22334444444555432 2455566778888999999999989876543 22
Q ss_pred cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 386 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 386 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+++.|..+. +..++.+.|.++||.+.. +. .++++||++. + .++++++.++|++++.
T Consensus 308 ~~~~~~~~~----~~~~~~~~l~~~Gv~v~~----~~----~~~~iRi~~~---~----~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 308 NFVLFGRFA----DRHAVWQGLLDRGVLIRD----VG----IPGWLRVTIG---T----PEENDAFLAALAEVLA 363 (368)
T ss_pred cEEEEeccC----CHHHHHHHHHHCCEEEEe----CC----CCCeEEEecC---C----HHHHHHHHHHHHHHHH
Confidence 333332331 467788888889999962 21 2468999965 3 6899999999998875
No 118
>PRK07324 transaminase; Validated
Probab=99.92 E-value=5.9e-23 Score=210.66 Aligned_cols=328 Identities=17% Similarity=0.147 Sum_probs=211.2
Q ss_pred cCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CCCCCCCcceEEeCCcHH
Q 010058 77 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAF-QLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 77 ~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~-g~~~~~~~~~V~~~sGs~ 153 (519)
+.++|..+|. .+++.+ +++.+.+.+.. -+ |+...+..+++ +.+++++ +++++ +|++|+|++
T Consensus 27 ~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~-~~------Y~~~~G~~~lr----~~ia~~~~~~~~~----~vi~t~G~~ 90 (373)
T PRK07324 27 CIDSLTLEELLALAGKNP-EAFYQELGQKK-LT------YGWIEGSPEFK----EAVASLYQNVKPE----NILQTNGAT 90 (373)
T ss_pred CCCCCcHHHHHhccCcch-HHHHHHHhcCC-cc------CCCCCCCHHHH----HHHHHHhcCCChh----hEEEcCChH
Confidence 3455655555 245566 77766665421 12 33334456677 5555555 35664 599999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
++..++.++++|||+|+++.+.+..+.. .+...|..+..++. +. +++.+|++++++.+.+ ++|+|++
T Consensus 91 ~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~~v~~v~~--~~~~~~~~d~~~l~~~~~~-~~kli~i 159 (373)
T PRK07324 91 GANFLVLYALVEPGDHVISVYPTYQQLYD--------IPESLGAEVDYWQL--KEENGWLPDLDELRRLVRP-NTKLICI 159 (373)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEec--ccccCCCCCHHHHHHhCCC-CCcEEEE
Confidence 8888999999999999998866555432 22334555555554 43 3467899999998876 8999998
Q ss_pred c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeec
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRK 302 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~ 302 (519)
+ ++| +|...+ +++|.++|++||+++++|+++ .++...+..++... ...+++.|++|++ +|+|.||+++++
T Consensus 160 ~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y-~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~ 238 (373)
T PRK07324 160 NNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVY-RPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANE 238 (373)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccc-cccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCH
Confidence 8 777 888888 788899999999999999985 34433221221111 2357788999975 688999999976
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEec
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVS 381 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 381 (519)
++.+.+.........+.+.....++ ..+++.. ....+...+.++++++.+.+.|.+. ++.++.
T Consensus 239 --------------~li~~~~~~~~~~~~~~~~~~q~~a-~~~l~~~-~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 302 (373)
T PRK07324 239 --------------EVIDILRKYRDYTMICAGVFDDMLA-SLALEHR-DAILERNRKIVRTNLAILDEWVAKEPRVSYVK 302 (373)
T ss_pred --------------HHHHHHHHHhCcEEecCChHHHHHH-HHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEEC
Confidence 5555554432221122223333332 3344321 1234666777888899999999887 666655
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHh-hcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKV-LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+. ...+.++.+.. +.+..++.+. |++.||.+. ||.... .++++||++.. + ++.+++.++.|.++++
T Consensus 303 p~-gg~~~~i~~~~-~~~~~~~~~~ll~~~gv~v~----pg~~F~-~~~~iRis~~~--~----~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 303 PK-AVSTSFVKLDV-DMPSEDFCLKLLKETGVLLV----PGNRFD-LEGHVRIGYCC--D----TETLKKGLKKLSEFLR 369 (373)
T ss_pred CC-ceEEEEEEeCC-CCCHHHHHHHHHHhcCEEEE----CccccC-CCCeEEEEecC--C----HHHHHHHHHHHHHHHH
Confidence 42 23344555533 3466666665 578899996 665421 24689999752 3 6778888888877775
Q ss_pred H
Q 010058 461 L 461 (519)
Q Consensus 461 ~ 461 (519)
.
T Consensus 370 ~ 370 (373)
T PRK07324 370 E 370 (373)
T ss_pred h
Confidence 3
No 119
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.9e-22 Score=206.71 Aligned_cols=321 Identities=16% Similarity=0.140 Sum_probs=219.2
Q ss_pred CeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 78 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 78 ~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
.++|..+++. +++.+.+++.+.+...+ +|+.. . ...++ +.++++++++++ +|++++|++ +
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~--~Y~~~------~-~~~Lr----~~ia~~~~~~~~----~I~it~G~~~~ 96 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEIW--KYGDP------E-NHDLR----HALAAHHGVAPE----NIMVGEGIDGL 96 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHhh--cCCCC------c-cHHHH----HHHHHHhCCCHH----HEEEcCCHHHH
Confidence 4689888875 58899999987664322 34322 1 34555 677777888774 699999999 6
Q ss_pred HHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-c
Q 010058 155 NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-A 233 (519)
Q Consensus 155 ~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~ 233 (519)
+..++.++++|||.|++.++.|.++... +...|..+..+++ +. ..+|++++++.+...++++|+++ |
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~~--------~~~~g~~~~~vp~--~~--~~~~~~~l~~~~~~~~~~~i~l~~P 164 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNYH--------VAGFGGRLVTVPY--RD--DREDLDALLDAARRENAPLVYLANP 164 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHH--------HHHcCCeEEEeeC--CC--CCCCHHHHHHHhcccCCcEEEEeCC
Confidence 6667788899999999998766555432 2233554555554 32 35899999887765589999887 7
Q ss_pred cc-ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCCC---CCeEEEEcCCCcc--cCCCcceEEeecccc
Q 010058 234 SA-YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPFE---YADVVTTTTHKSL--RGPRGAMIFFRKGVK 305 (519)
Q Consensus 234 sn-~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~~---~~di~~~S~~K~l--~GprgG~i~~~~~~~ 305 (519)
+| +|...+.+++.++++.. +++||+|+++. .+...+... ++. .-.+++.|++|.+ +|.|.||+++++
T Consensus 165 ~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~-~~~~~~~~~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--- 239 (369)
T PRK08153 165 DNPMGSWHPAADIVAFIEALPETTLLVLDEAYC-ETAPAGAAP-PIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP--- 239 (369)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hhcCcccch-hhhhcCCCEEEEecchHhccCcchheeeeecCH---
Confidence 77 89999988887777644 89999999964 222222111 111 2347788999986 688999999987
Q ss_pred cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCC
Q 010058 306 EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTE 385 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 385 (519)
++.+.+.....+ .+.+.....++..+++ .....++..+.+.++++.+.+.|++.|+.+.. +.
T Consensus 240 -----------~~~~~l~~~~~~---~~~s~~~q~~~~~~l~--~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p--~~ 301 (369)
T PRK08153 240 -----------GTIKAFDKVRNH---FGMNRIAQAAALAALK--DQAYLAEVVGKIAAARDRIAAIARANGLTPLP--SA 301 (369)
T ss_pred -----------HHHHHHHHhhcC---CCCCHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--Cc
Confidence 555544433222 2345555555555554 12334777888899999999999988876543 33
Q ss_pred cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 386 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 386 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
..++++++........++.+.|.+.||.++ .|+.. ...+++|+++. + ++|+++++++|++++...
T Consensus 302 ~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~---~p~~~--~~~~~iRis~~---~----~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 302 TNFVAIDCGRDGAFARAVLDGLIARDIFVR---MPGVA--PLDRCIRVSCG---P----DEELDLFAEALPEALEAA 366 (369)
T ss_pred CcEEEEECCCCcccHHHHHHHHHHCCeEEe---eCCCC--CCCCeEEEecC---C----HHHHHHHHHHHHHHHHHh
Confidence 456677664323346678888888999995 24432 23468999975 3 799999999999988643
No 120
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.92 E-value=3.1e-23 Score=212.88 Aligned_cols=338 Identities=13% Similarity=0.069 Sum_probs=221.7
Q ss_pred eeecCCCCCCcHH-HHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeC--CcHHHH
Q 010058 79 LELIPSENFTSVS-VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSL--SGSPAN 155 (519)
Q Consensus 79 i~L~a~en~~~~~-V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~--sGs~a~ 155 (519)
+.|+++...+++. |++++...+.. .. +| +.++ .++-+.+++.+++++|+..+. +|.++ |||.++
T Consensus 14 ~~f~~Gp~~~~~~~v~~a~~~~~~~-----~~-hr---~~~f-~~~~~~~r~~l~~l~~~~~~~---~v~~~~gs~T~~~ 80 (378)
T PRK03080 14 PRFSSGPCKKRPGWQLEALADALLG-----RS-HR---QKPV-KALLKRVIEGTRELLSLPEGY---EVGIVPGSDTGAW 80 (378)
T ss_pred CCcCCCCcCCChHHHHHHHHhhhcc-----cC-cC---CHHH-HHHHHHHHHHHHHHhCCCCCc---eEEEECCchHHHH
Confidence 5688888888888 99999864332 11 11 1233 455568889999999984321 36654 444488
Q ss_pred HHHHHhhcCC-CCEEEEecCCCcccccccccccCCceeeeee-eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 156 FQVYTALLKP-HERIMALDLPHGGHLSHGYQTDTKKISAVSI-FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 156 ~~~~~all~p-GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
.+++.+++++ ++.|+. +..|+..+... . ....|. .++.++. + .++.+|+++++. +++|.++
T Consensus 81 ~~~~~~l~~~~~~~vi~-~g~f~~~~~~~--~----~~~~g~~~v~~~~~--~-~g~~~d~~~i~~------~~~V~~~h 144 (378)
T PRK03080 81 EMALWSLLGARRVDHLA-WESFGSKWATD--V----VKQLKLEDPRVLEA--D-YGSLPDLSAVDF------DRDVVFTW 144 (378)
T ss_pred HHHHHhcCCCCcceEEE-eCHHHHHHHHH--H----HhhcCCCCceEecc--C-CCCCCCHhhcCC------CCCEEEEe
Confidence 8788898875 445544 44554432210 0 011244 4455543 2 346778877432 5567666
Q ss_pred cc-cccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--cccc
Q 010058 233 AS-AYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEIN 308 (519)
Q Consensus 233 ~s-n~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~~~~ 308 (519)
.+ .+|...|+++|.+ +++|+++++|++|+.|..+.++. .+|++++|+||||.||.| |+++++++. ++.|
T Consensus 145 ~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~-----~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p 217 (378)
T PRK03080 145 NGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS-----KLDVYTFSWQKVLGGEGGHGMAILSPRAVERLES 217 (378)
T ss_pred cCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH-----HCcEEEEehhhhCCCCCceEEEEECHHHHHhhhc
Confidence 33 3899999999998 88999999999999999887765 369999999999999998 999999864 2334
Q ss_pred -ccCcc--hhhhHHH---HhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcC-CEEe
Q 010058 309 -KQGQE--VMYAYED---KINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERG-YDLV 380 (519)
Q Consensus 309 -~~g~~--~~~~~~~---~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~ 380 (519)
..|.. ..+++.. .+....-.+..++|+...+.++.++++++.+. +++...++..++++++.+.|++.+ +.++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~ 297 (378)
T PRK03080 218 YTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPL 297 (378)
T ss_pred ccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 22211 1111111 11111112334678888888889999999886 789999999999999999999985 5665
Q ss_pred cC-CCCcceeeeeccCCC----CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 381 SG-GTENHLVLVNLRNKG----IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 381 ~~-~~~~~~~~v~~~~~~----~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
.. .......++.+..++ .+.. +...|.+.||.++. |.... ..+.+|+|++.+++ ++|+++++++|
T Consensus 298 ~~~~~~~s~~i~~~~~~~~~~~~~~~-~~~~l~~~~i~v~~----g~~~~-~~~~vRis~~~~~t----~~di~~l~~al 367 (378)
T PRK03080 298 VADPATRSNTSVTLDFVDAQAAVDAA-AVAKLLRENGAVDI----EPYRD-APNGLRIWCGPTVE----PADVEALTPWL 367 (378)
T ss_pred cCCccccCccEEEEEcCCchHHHHHH-HHHHHHHcCCeecc----ccccC-CCCcEEEecCCCCC----HHHHHHHHHHH
Confidence 42 111111233333222 3333 44445456887752 22111 24689999999999 99999999999
Q ss_pred HHHHHHH
Q 010058 456 DAAVKLA 462 (519)
Q Consensus 456 ~~~l~~~ 462 (519)
++++...
T Consensus 368 ~~~~~~~ 374 (378)
T PRK03080 368 DWAFERL 374 (378)
T ss_pred HHHHHHH
Confidence 9987643
No 121
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=9.8e-23 Score=211.92 Aligned_cols=322 Identities=18% Similarity=0.181 Sum_probs=212.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc--C
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL--K 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~-y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all--~ 164 (519)
.+|.|++++.+.+.. +.-+..+.+. |+..+...++| +++++++|.+. .|.++||++||..++..+. .
T Consensus 61 ~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~~~~i~~l~~~~ 130 (410)
T PRK13392 61 QHPDVIGAMVDALDR-YGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSNDAALSTLGKLL 130 (410)
T ss_pred CCHHHHHHHHHHHHH-cCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHHhcCC
Confidence 378999999988764 5333333433 33333455566 88889999643 5999999989888888775 4
Q ss_pred CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhh---hhCCcEEEEc-ccc-cccc
Q 010058 165 PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAA---LFRPKLIVAG-ASA-YARL 239 (519)
Q Consensus 165 pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~---~~k~klIi~~-~sn-~g~~ 239 (519)
|||.|+.....|++... .+...|..+..++ . -|.+.+++.+. ..++++|+++ ++| +|..
T Consensus 131 ~g~~vi~~~~~h~s~~~--------~~~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~ 194 (410)
T PRK13392 131 PGCVILSDALNHASMIE--------GIRRSGAEKQVFR--H------NDLADLEEQLASVDPDRPKLIAFESVYSMDGDI 194 (410)
T ss_pred CCCEEEEehhhhHHHHH--------HHHHcCCeEEEEe--C------CCHHHHHHHHHhccCCCCEEEEEeCCCCCCccc
Confidence 89988887666665533 1223344333321 1 14455555543 2378898888 555 7899
Q ss_pred ccHHHHHHHHhhcCCEEEehhhhhhhcccc---CCC--CCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcch
Q 010058 240 YDYARIRKVCDKQKAVMLADMAHISGLVAA---GVI--PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEV 314 (519)
Q Consensus 240 ~d~~~i~~ia~~~~~~livD~ah~~g~~~~---~~~--~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~ 314 (519)
.|+++|.++|+++|+++++|++|..|.... +.. ..-....|+++.|++|+++++ ||++++++
T Consensus 195 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-GG~~~~~~------------ 261 (410)
T PRK13392 195 APIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-GGYIAASA------------ 261 (410)
T ss_pred ccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-cchhhcCH------------
Confidence 999999999999999999999998776421 111 111124689999999998654 68888876
Q ss_pred hhhHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeec
Q 010058 315 MYAYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNL 393 (519)
Q Consensus 315 ~~~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~ 393 (519)
++.+.+.....+.. .++.+....+++.++++.... .....+++.++++++.+.|++.|+++..+ ..+++.+.+
T Consensus 262 --~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~i~~ 335 (410)
T PRK13392 262 --DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNANGIPVMPS--PSHIVPVMV 335 (410)
T ss_pred --HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEEEEEe
Confidence 44554433222211 122333455666677876543 34456788999999999999999876543 334443433
Q ss_pred cCCCCcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 394 RNKGIDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 394 ~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.. +.+..++.+.| ++.||.++....|.- +.+..+||++++...+ ++|++++++.|.++.+.
T Consensus 336 ~~-~~~~~~~~~~L~~~~GI~v~~~~~p~~--~~~~~~lRis~~~~~t----~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 336 GD-PTLCKAISDRLMSEHGIYIQPINYPTV--PRGTERLRITPTPLHD----DEDIDALVAALVAIWDR 397 (410)
T ss_pred CC-HHHHHHHHHHHHHhCCEEEeeeCCCCC--CCCCceEEEEECCCCC----HHHHHHHHHHHHHHHHH
Confidence 21 11345677766 578999974333321 2344689999998888 89999999999988753
No 122
>PRK09265 aminotransferase AlaT; Validated
Probab=99.92 E-value=5.9e-22 Score=205.65 Aligned_cols=339 Identities=14% Similarity=0.081 Sum_probs=212.6
Q ss_pred ccCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc--CCCCCCCcceEEe
Q 010058 76 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAF--QLDPAKWGVNVQS 148 (519)
Q Consensus 76 ~~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~--g~~~~~~~~~V~~ 148 (519)
.+.++|..++. ++++.+.+++.+.+... .+| +...+...+++.+.+++.... +++++ +|++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~Y------~~~~G~~~lr~~ia~~~~~~~~~~~~~~----~i~~ 100 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGY------SDSKGLFSARKAIMQYYQQKGIPDVDVD----DIYI 100 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CCC------CCCCCcHHHHHHHHHHHhccCCCCCCcc----cEEE
Confidence 46688876533 25778888887765431 133 333455567755555554332 45664 6999
Q ss_pred CCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCC
Q 010058 149 LSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRP 226 (519)
Q Consensus 149 ~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~ 226 (519)
++|++ ++..++.++++|||+|++++++|..+... +...|.....++ .+. +++.+|++++++.+.+ ++
T Consensus 101 t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~--------~~~~g~~~v~~~--~~~~~~~~~d~~~l~~~~~~-~~ 169 (404)
T PRK09265 101 GNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAA--------VSLSGGKPVHYL--CDEEAGWFPDLDDIRSKITP-RT 169 (404)
T ss_pred eCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHH--------HHHcCCEEEEEe--cccccCCCCCHHHHHHhccc-cc
Confidence 99998 77778889999999999999877655432 222344333343 332 3567999999998876 89
Q ss_pred cEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC----CC-CeEEEEcCCCcc--cCCC
Q 010058 227 KLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF----EY-ADVVTTTTHKSL--RGPR 294 (519)
Q Consensus 227 klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~----~~-~di~~~S~~K~l--~Gpr 294 (519)
++|+++ ++| +|...+ +++|.++|+++|+++|+|+++. .+...+....++ +. .-+++.|++|.+ +|.|
T Consensus 170 ~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 248 (404)
T PRK09265 170 KAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYD-KILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFR 248 (404)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhh-hccCCCCCcCCHHHcCCCceEEEEecchhhccCcccc
Confidence 988877 777 888888 7888999999999999999964 222221111111 12 235667889976 6889
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH---HHHHHHHHHHHHHH
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY---QEQVLSNSSKFARS 371 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~---~~~~~~~~~~l~~~ 371 (519)
.||+++....... .++.+.+.... . ...+++.....++..++... ..++++ .+++.++++.+.+.
T Consensus 249 iG~~v~~~~~~~~--------~~~~~~~~~~~-~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~r~~~~~~ 316 (404)
T PRK09265 249 VGWMVLSGPKKHA--------KGYIEGLDMLA-S-MRLCANVPAQHAIQTALGGY--QSINELILPGGRLYEQRDRAWEL 316 (404)
T ss_pred eEEEEEeCchHHH--------HHHHHHHHHHh-c-cccCCCcHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999974310000 01233222110 1 11123333444444455321 122322 24677888899999
Q ss_pred HHhc-CCEEecCCCCcceeeeeccCCC----CcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCH
Q 010058 372 LLER-GYDLVSGGTENHLVLVNLRNKG----IDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVE 445 (519)
Q Consensus 372 L~~~-g~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~ 445 (519)
|++. |+.+..+ ..+.++|+.+.... -+.+.+.+.|.+.||.+. ||.. +...++++|+++. .+ +
T Consensus 317 L~~~~~~~~~~p-~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~----pg~~F~~~~~~~~Ri~~~--~~----~ 385 (404)
T PRK09265 317 LNAIPGVSCVKP-KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLV----QGTGFNWPEPDHFRIVTL--PR----V 385 (404)
T ss_pred HhcCCCCcccCC-CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEE----CchhhCCCCCCeEEEEeC--CC----H
Confidence 9887 7665543 34566677664321 133457788889999996 6554 2234678999984 34 7
Q ss_pred HHHHHHHHHHHHHHHH
Q 010058 446 EDFEKVAEFFDAAVKL 461 (519)
Q Consensus 446 ~di~~l~~~l~~~l~~ 461 (519)
+++++.++.|.++++.
T Consensus 386 e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 386 DDLEEAIGRIGRFLSG 401 (404)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999999887763
No 123
>PRK09105 putative aminotransferase; Provisional
Probab=99.92 E-value=2.1e-22 Score=206.20 Aligned_cols=312 Identities=16% Similarity=0.118 Sum_probs=213.7
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
++.+.|..++|+ +|+.+++++.+.+.. . .. |+... ..+++ +.+++.+|++++ +|.+|+|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~------Y~~~~-~~~Lr----~aia~~~~v~~e----~I~it~Gs~ 105 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL-S-GR------YDLEL-EDDLR----TLFAAQEGLPAD----HVMAYAGSS 105 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH-h-cC------CCCch-HHHHH----HHHHHHhCcChh----hEEEcCChH
Confidence 456888888884 588999999887643 1 12 23222 44555 667778899875 599999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||+|+++++.|+.+.. .....|..+..+++ + +++.+|++++++. .+ ++++|+++
T Consensus 106 ~ai~~~~~~l~~~gd~Vli~~P~y~~~~~--------~~~~~g~~~~~v~~--~-~~~~~d~~~l~~~-~~-~~~~v~l~ 172 (370)
T PRK09105 106 EPLNYAVLAFTSPTAGLVTADPTYEAGWR--------AADAQGAPVAKVPL--R-ADGAHDVKAMLAA-DP-NAGLIYIC 172 (370)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCCeEEEecC--C-CCCCCCHHHHHhc-CC-CCCEEEEe
Confidence 8888889999999999999977766643 23344655555553 3 3477999999876 33 78888877
Q ss_pred -ccc-ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCCC----CCCe-EEEEcCCCcc--cCCCcceEEee
Q 010058 233 -ASA-YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSPF----EYAD-VVTTTTHKSL--RGPRGAMIFFR 301 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p~----~~~d-i~~~S~~K~l--~GprgG~i~~~ 301 (519)
|+| +|...+.+++.++++. +++++|+|+++.. +.. . ++.. .+.+ +++.|++|++ +|+|.||++++
T Consensus 173 nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~-~--~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 248 (370)
T PRK09105 173 NPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIH-FSD-A--PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR 248 (370)
T ss_pred CCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHH-hcc-C--cchHHHHhhCCCEEEEecccHhhcCCccceeeeecC
Confidence 777 8999998888888754 4899999999742 211 1 1111 0233 6667999975 68889999998
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
+ ++.+.+... . ...++.....+...++.. ...+++..+++.++++.+.+.|++.|+.+..
T Consensus 249 ~--------------~~i~~l~~~-~---~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~ 308 (370)
T PRK09105 249 P--------------DLLAKLARF-G---HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTP 308 (370)
T ss_pred H--------------HHHHHHHhc-C---CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCC
Confidence 7 555555443 1 122344444444444442 2234777788999999999999999887655
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+ ...++++++. .+..++.+.|.+.||.+... .+ ..++++||++. + ++++++++++|++++
T Consensus 309 ~--~~~f~~~~~~---~~~~~l~~~L~~~gI~v~~~-~~-----~~~~~~Ris~~---~----~~~~~~l~~al~~~~ 368 (370)
T PRK09105 309 S--QANCFMVDVK---RPAKAVADAMAKQGVFIGRS-WP-----IWPNWVRVTVG---S----EEEMAAFRSAFAKVM 368 (370)
T ss_pred C--CCcEEEEeCC---CCHHHHHHHHHHCCcEEecC-CC-----CCCCeEEEEcC---C----HHHHHHHHHHHHHHh
Confidence 3 2334455543 35677888887889998422 11 12578999966 3 688999999998765
No 124
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.92 E-value=6.5e-22 Score=205.24 Aligned_cols=355 Identities=15% Similarity=0.085 Sum_probs=223.1
Q ss_pred HHHHHHHHHHhcccCeeecCCCC------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC
Q 010058 64 IADIIELEKARQWKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL 137 (519)
Q Consensus 64 ~~~~~~~e~~~~~~~i~L~a~en------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~ 137 (519)
+.+.+.+......+.++|..+++ ++++.+.+++.+.+......+ |+...+...+++.+.+++....|.
T Consensus 19 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~~~ 92 (403)
T TIGR01265 19 IVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNG------YAPSVGALAAREAVAEYLSSDLPG 92 (403)
T ss_pred HHHHHHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHHhhcCC
Confidence 33334443334567788887754 467899999988876532222 333344556665555555544443
Q ss_pred CCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHH
Q 010058 138 DPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQ 216 (519)
Q Consensus 138 ~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~ 216 (519)
+.+. .+|++|+|++ ++..++.+++++||+|+++++++..+.. .....|..+..+++.. .+++.+|+++
T Consensus 93 ~~~~--~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~~~~-~~~~~~d~~~ 161 (403)
T TIGR01265 93 KLTA--DDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDT--------RAAFSGLEVRLYDLLP-EKDWEIDLDG 161 (403)
T ss_pred CCCH--HHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEecCCc-ccCCccCHHH
Confidence 2211 3699999988 8888999999999999999977654422 1223354444444321 2356899999
Q ss_pred HHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C-C-CeEEEEcC
Q 010058 217 LEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E-Y-ADVVTTTT 286 (519)
Q Consensus 217 l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~-~-~di~~~S~ 286 (519)
+++.+.+ ++++++++ ++| +|...+ +++|.++|+++|+++|+|+++. .+...+....++ . . --+++.|+
T Consensus 162 l~~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~ 239 (403)
T TIGR01265 162 LEALADE-KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYG-HMVFGDAPFIPMASFASIVPVLSLGGI 239 (403)
T ss_pred HHHHhCc-CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCccchhhhccCCcEEEEeec
Confidence 9998876 78888887 666 887775 7888999999999999999854 332222110111 1 1 24677899
Q ss_pred CCc--ccCCCcceEEeecc--cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH
Q 010058 287 HKS--LRGPRGAMIFFRKG--VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362 (519)
Q Consensus 287 ~K~--l~GprgG~i~~~~~--~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~ 362 (519)
+|. ++|.|.||+++++. ... ..+.+.+...... ..+++.....++..++.......+++.++++.
T Consensus 240 SK~~~~pGlRiG~~v~~~~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 308 (403)
T TIGR01265 240 SKRWVVPGWRLGWIIIHDPHGIFR---------DTVLQGLKNLLQR--ILGPATIVQGALPDILENTPQEFFDGKISVLK 308 (403)
T ss_pred ccccCCCcceEEEEEEeCchhhhH---------HHHHHHHHHHhhh--hcCCChHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 997 47888899998531 100 0123322222111 12334445555555665422234577888899
Q ss_pred HHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCC----CcHHHHHHh-hcccCeEEcccccCCCCCCCCCCeEEeccC
Q 010058 363 SNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKG----IDGSRVEKV-LESVHIAANKNTVPGDVSAMVPGGIRMGTP 436 (519)
Q Consensus 363 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~ 436 (519)
++++.+.+.|+.. |+.+..+ ..+.++|+.+.... .+..++.+. +++.||.+. ||.... ..++|||++.
T Consensus 309 ~~~~~l~~~L~~~~~~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~f~-~~~~iRis~~ 382 (403)
T TIGR01265 309 SNAELCYEELKDIPGLVCPKP-EGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICL----PGSAFG-LPNWVRITIT 382 (403)
T ss_pred HHHHHHHHHHhcCCCceecCC-CceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEe----CccccC-CCCeEEEEec
Confidence 9999999999887 7765433 34567777764321 245666555 578999996 665421 3678999976
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHH
Q 010058 437 ALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 437 ~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
. . ++.+++.++.|.+++.
T Consensus 383 ~--~----~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 383 V--P----ESMLEEACSRIKEFCE 400 (403)
T ss_pred C--C----HHHHHHHHHHHHHHHH
Confidence 3 3 5677777777776664
No 125
>PRK08175 aminotransferase; Validated
Probab=99.92 E-value=8.1e-22 Score=204.02 Aligned_cols=336 Identities=14% Similarity=0.134 Sum_probs=217.7
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sG 151 (519)
.+.++|..+.+. +++.+.+++.+.+.+.. ...|+...+..++++++.+++.+.+|. +++. +|++|+|
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~---~i~~t~G 99 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPD------THGYSTSRGIPRLRRAISRWYQDRYDVDIDPES---EAIVTIG 99 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC------cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---cEEEccC
Confidence 455777655432 45667777766554321 123455566778888888888877776 3431 5999999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh--hCCcE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL--FRPKL 228 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~--~k~kl 228 (519)
++ +...++.++++|||+|+++++.++.+.. .+...|..+..++ .+.+ ..+.+++++++++ .++++
T Consensus 100 ~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~~~--~~~~~~l~~~l~~~~~~~~~ 167 (395)
T PRK08175 100 SKEGLAHLMLATLDHGDTVLVPNPSYPIHIY--------GAVIAGAQVRSVP--LVEG--VDFFNELERAIRESYPKPKM 167 (395)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCCeEEEEe--cccC--CCcHHHHHHHHhhccCCceE
Confidence 98 7766888889999999999977766533 2223454444444 4432 2347888887764 27899
Q ss_pred EEEc-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCC---CC---CCeEEEEcCCCcc--cCCCc
Q 010058 229 IVAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP---FE---YADVVTTTTHKSL--RGPRG 295 (519)
Q Consensus 229 Ii~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p---~~---~~di~~~S~~K~l--~Gprg 295 (519)
|+++ ++| +|...+. ++|.++|+++|+++|+|+++.. +...+....+ +. ...+++.|++|.+ +|.|.
T Consensus 168 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~-l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRi 246 (395)
T PRK08175 168 MILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYAD-IVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRI 246 (395)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHh-hccCCCCCcchhcCCCcccCEEEEeeccccccCcchhh
Confidence 9888 677 8888776 6888889999999999999753 2222211111 11 2346789999986 67888
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
||+++++ ++.+.+.+.......++... ...+...++... ...++..++.++++++++.+.|++.
T Consensus 247 G~~~~~~--------------~l~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~ 310 (395)
T PRK08175 247 GFMVGNP--------------ELVSALARIKSYHDYGTFTP-LQVAAIAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEA 310 (395)
T ss_pred eeeeCCH--------------HHHHHHHHHHhhcccCCCcH-HHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999887 55554443221111122222 333333444321 2345777888899999999999998
Q ss_pred CCEEecCCCCcceeeeeccCC--CCcHHHHHH-hhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 376 GYDLVSGGTENHLVLVNLRNK--GIDGSRVEK-VLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~-~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
|+.+..+ ..+.++|+.+... ..+..++.. +++++||.+. |+.. +...++++||++. .+ ++.+.+.
T Consensus 311 ~~~~~~p-~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~----p~~~f~~~~~~~lRis~~--~~----~~~~~~a 379 (395)
T PRK08175 311 GWMVEMP-KASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVS----PGIGFGDYGDTHVRFALI--EN----RDRIRQA 379 (395)
T ss_pred CCcccCC-CEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEe----CchhhCcCCCCeEEEEeC--CC----HHHHHHH
Confidence 8765443 3456777777542 124566665 4567999996 5543 3334578999975 34 6788888
Q ss_pred HHHHHHHHH
Q 010058 452 AEFFDAAVK 460 (519)
Q Consensus 452 ~~~l~~~l~ 460 (519)
++.|.+++.
T Consensus 380 l~~l~~~l~ 388 (395)
T PRK08175 380 IRGIKAMFR 388 (395)
T ss_pred HHHHHHHHH
Confidence 888877775
No 126
>PRK06855 aminotransferase; Validated
Probab=99.92 E-value=3.5e-22 Score=208.80 Aligned_cols=349 Identities=15% Similarity=0.103 Sum_probs=218.9
Q ss_pred ccCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 010058 76 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s 150 (519)
.+.+.|.-+++ .+|+.+.+++.+.+.+.- ...|+...+..++++...+++.+.+|++.+. .+|++|+
T Consensus 32 ~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~------~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~--~~I~it~ 103 (433)
T PRK06855 32 VKITWENIGDPIAKGEKIPDWMKEIVAELVMDDK------SYGYCPTKGVLETREFLAELNNKRGGAQITP--DDIIFFN 103 (433)
T ss_pred ccccccccCCCcccCCCCCHHHHHHHHHHhhcCC------CCCCCCCCCCHHHHHHHHHHHHhccCCCCCH--hHEEEcC
Confidence 34567765555 568888888888764311 1224445667788888889988877764322 3699999
Q ss_pred cHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhh-hCCc
Q 010058 151 GSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAAL-FRPK 227 (519)
Q Consensus 151 Gs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~-~k~k 227 (519)
|++ ++..++ ++++|||.|++.++.|.++.... ....|... +++++++ +++.+|++++++.+.. .+++
T Consensus 104 G~~~al~~~~-~l~~~Gd~Vlv~~P~Y~~~~~~~-------~~~~g~~~--v~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 173 (433)
T PRK06855 104 GLGDAIAKIY-GLLRREARVIGPSPAYSTHSSAE-------AAHAGYPP--VTYRLDPENNWYPDLDDLENKVKYNPSIA 173 (433)
T ss_pred cHHHHHHHHH-HhcCCCCeEEEeCCCCchHHHHH-------HHhcCCeE--EEEecccccCCCCCHHHHHHHHhcCCCce
Confidence 998 776565 48899999999998776643210 01123333 3344443 3567999999999874 2578
Q ss_pred EEEEc-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC----C-CCeEEEEcCCCcc--cCCCc
Q 010058 228 LIVAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF----E-YADVVTTTTHKSL--RGPRG 295 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~----~-~~di~~~S~~K~l--~Gprg 295 (519)
+++++ |+| +|..++. ++|.++|+++|++||+|+++. .+...+....++ + ...|++.|++|++ +|+|.
T Consensus 174 ~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~-~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRi 252 (433)
T PRK06855 174 GILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYN-NIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRC 252 (433)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceE
Confidence 77776 777 8877774 566777899999999999854 333222111111 1 2348889999976 79999
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc-CHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK-TPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
||++++..... + ....+.+.+...... ..+++.....++..+++.-. +..+++.++.+.++++.+.+.|.+
T Consensus 253 G~ii~p~~~~~-~-----~~~~~~~~~~~~~~~--~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~ 324 (433)
T PRK06855 253 GWIEVYNADKD-E-----VFKKYINSILNAKMI--EVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKD 324 (433)
T ss_pred EEEEEeCCchh-h-----HHHHHHHHHHHhhcc--ccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998431000 0 000222322221111 11233444444455554211 123467788889999999999988
Q ss_pred c-CCEEecCCCCcceeeeeccCCC--------------------------CcHHHH-HHhhcccCeEEcccccCCCCCCC
Q 010058 375 R-GYDLVSGGTENHLVLVNLRNKG--------------------------IDGSRV-EKVLESVHIAANKNTVPGDVSAM 426 (519)
Q Consensus 375 ~-g~~~~~~~~~~~~~~v~~~~~~--------------------------~~~~~~-~~~L~~~gI~v~~~~~p~~~~~~ 426 (519)
. |+.+..+ ..+.++|+++...- .+..++ ..+|++.||.+. ||+....
T Consensus 325 ~~~~~~~~p-~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~----PG~~F~~ 399 (433)
T PRK06855 325 VPGLKVNRT-NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVV----PLSSFCT 399 (433)
T ss_pred CCCeeccCC-CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEe----cCCcCCC
Confidence 6 7654333 34567787775310 122333 355778999995 7765211
Q ss_pred CCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 427 VPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 427 ~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
...++||++... + ++++++.++.|.++++.
T Consensus 400 ~~~~~Rls~~~~-~----~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 400 ELNGFRVTLLER-D----EEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CCCceEEEECCC-c----HHHHHHHHHHHHHHHHH
Confidence 234699998753 4 68999999999888864
No 127
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.92 E-value=2.6e-22 Score=206.67 Aligned_cols=328 Identities=13% Similarity=0.110 Sum_probs=213.8
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHE 167 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~-~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD 167 (519)
.|++++++.+.+.. |.-|+.++| +|+......++| +++++++|.+. .+.++||.+++.+++.++++|||
T Consensus 14 ~~~~~~~~~~a~~~-~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~~i~~l~~~GD 83 (392)
T PLN03227 14 SPTLRQTALESLSH-YGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSSTVAAFAKRGD 83 (392)
T ss_pred CHHHHHHHHHHHHH-hCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHHHHhCCCCC
Confidence 68899999888865 766666655 455556677777 88999999874 49999999988899999999999
Q ss_pred EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh----------hCCcEEEEc-ccc-
Q 010058 168 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL----------FRPKLIVAG-ASA- 235 (519)
Q Consensus 168 ~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~----------~k~klIi~~-~sn- 235 (519)
.|++.+..|++.... +.+.+..... ++.+ ..-|++.+.+.+.. .++++|++. +.|
T Consensus 84 ~Vl~~~~~h~s~~~~--------~~l~~~~~~~--~~~~---d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~ 150 (392)
T PLN03227 84 LLVVDRGVNEALLVG--------VSLSRANVRW--FRHN---DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKN 150 (392)
T ss_pred EEEEeccccHHHHHH--------HHHcCCeEEE--eCCC---CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCC
Confidence 999999888776442 2223322222 2221 11133444334431 257788887 444
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhcccc---------CCCCCCCCCCeEEEEcCCCcccCCCcceEEeeccccc
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAA---------GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 306 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~---------~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~ 306 (519)
.|...|+++|+++|++||+++|+|++|..|.... ++. |..++|++++|.+|++ ||.||++++++
T Consensus 151 ~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~--p~~~~Div~~slsk~~-g~~gg~v~~~~---- 223 (392)
T PLN03227 151 TGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLK--PMVHAEIVTFSLENAF-GSVGGMTVGSE---- 223 (392)
T ss_pred CCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCC--CCCCceEEEeechhhh-hccCcEEecCH----
Confidence 7899999999999999999999999998664321 122 2337899999999975 68999998887
Q ss_pred ccccCcchhhhHHHHhhhcccCCCCCCc-cHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC---
Q 010058 307 INKQGQEVMYAYEDKINQAVFPGLQGGP-HNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG--- 382 (519)
Q Consensus 307 ~~~~g~~~~~~~~~~i~~~~~~~~~g~~-~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--- 382 (519)
++.+.+........+++. +....++...++..... .++..+++.++.++|.+.|++.++..+.+
T Consensus 224 ----------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg 291 (392)
T PLN03227 224 ----------EVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRN 291 (392)
T ss_pred ----------HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence 444333222122223332 22223333344544322 24567888999999999998765543221
Q ss_pred ------CCCcceeeeeccCCCCc--------HHHHHHhhcccCeEEcccc-cCCCC-CCCCCCeEEeccCccccCCCCHH
Q 010058 383 ------GTENHLVLVNLRNKGID--------GSRVEKVLESVHIAANKNT-VPGDV-SAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 383 ------~~~~~~~~v~~~~~~~~--------~~~~~~~L~~~gI~v~~~~-~p~~~-~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
.+.+.+..+.+.+...+ ..++.+.|.+.||.+.... .|... ....+..||++++...| ++
T Consensus 292 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t----~e 367 (392)
T PLN03227 292 RLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHT----RE 367 (392)
T ss_pred ccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCC----HH
Confidence 11233444544321111 2367778888999886311 01100 11124679999998888 99
Q ss_pred HHHHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVKLA 462 (519)
Q Consensus 447 di~~l~~~l~~~l~~~ 462 (519)
|++++++.|++++...
T Consensus 368 ei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 368 DIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998653
No 128
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.92 E-value=5.2e-22 Score=204.97 Aligned_cols=343 Identities=13% Similarity=0.065 Sum_probs=229.8
Q ss_pred CCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-C-CCCcceEEeCCcHH-HHHHHHHhh
Q 010058 86 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-P-AKWGVNVQSLSGSP-ANFQVYTAL 162 (519)
Q Consensus 86 n~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~-~~~~~~V~~~sGs~-a~~~~~~al 162 (519)
.++.|.+.+++.+.+...+ ++|.. .+ ... ++|+.+++++++++|++ + ++ ....+|||++ +|..++.+.
T Consensus 51 t~~~p~~~~~~~~~l~~~~--~np~s---~~-~~~-~le~~~~~~la~llg~~~~~~~--~~g~~TsGgTEAn~~al~~a 121 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNM--IDKDE---YP-QTA-EIENRCVNMLADLWHAPAKDAE--AVGTSTIGSSEAIMLGGLAM 121 (431)
T ss_pred CCCCHHHHHHHHHHHhcCC--CCccc---Cc-cHH-HHHHHHHHHHHHHhCCCCCCCC--CeEEEechHHHHHHHHHHHH
Confidence 4567889999998886534 55544 12 223 89999999999999997 3 23 2233467777 887766554
Q ss_pred c--------CCC-----CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 163 L--------KPH-----ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 163 l--------~pG-----D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
. +.| -.|++++.+|.+.... ....|..++.++ +|++++.+|+++|++++.+ +|.+|
T Consensus 122 r~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka--------~~~lg~~v~~i~--~d~~~~~vd~~~L~~~i~~-~t~lV 190 (431)
T TIGR01788 122 KWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKF--------ARYFDVELREVP--MDPGRYVIDPEQVVEAVDE-NTIGV 190 (431)
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHH--------HHHcCceeEEEe--cCCCceeeCHHHHHHHHhh-CCeEE
Confidence 2 112 3688888777776542 222354445554 5544468999999999987 88888
Q ss_pred EEc-ccc-ccccccHHHHHHHHhhc------CCEEEehhhhhhhccccCC--CCC--CCCCCeEEEEcCCCcccCCCc-c
Q 010058 230 VAG-ASA-YARLYDYARIRKVCDKQ------KAVMLADMAHISGLVAAGV--IPS--PFEYADVVTTTTHKSLRGPRG-A 296 (519)
Q Consensus 230 i~~-~sn-~g~~~d~~~i~~ia~~~------~~~livD~ah~~g~~~~~~--~~~--p~~~~di~~~S~~K~l~Gprg-G 296 (519)
++. .++ +|...|+++|.++|+++ |+++++|+|+..+..+... .+. ...++|.+++|.||++.||.| |
T Consensus 191 ~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G 270 (431)
T TIGR01788 191 VCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVG 270 (431)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcE
Confidence 888 455 89999999999999999 9999999998865543211 111 123799999999999889998 9
Q ss_pred eEEeecccccccccCcchhhhHHHHhhh-cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQ-AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~-~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
+++++++..+.+...... ++ +.. .......++......+++...+..+...+++++.++..+++++|.+.|++.
T Consensus 271 ~l~~r~~~~l~~~~~~~~--~y---l~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~ 345 (431)
T TIGR01788 271 WVIWRDEEALPEELIFHV--NY---LGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKL 345 (431)
T ss_pred EEEEeChHHcchhheecc--cc---cCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999987411100000000 00 000 000112233333344456667777777899999999999999999999998
Q ss_pred -CCEEecCCCCcceeeeeccCC-----CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHH
Q 010058 376 -GYDLVSGGTENHLVLVNLRNK-----GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 376 -g~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
+++++.+.. .+.++.++.. +++..++.+.|.+.|+.+.....|.. ..+...+|+.+....+ .+.++
T Consensus 346 ~~~el~~~~~--~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~--~~~~~~lR~~~~~~~~----~~~~~ 417 (431)
T TIGR01788 346 GPFEIISDGS--GIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKN--AEDIVVMRIVVREGFS----RDLAE 417 (431)
T ss_pred CCEEEeeCCC--CceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCc--cCCeEEEEEEecCCCC----HHHHH
Confidence 588886522 3445555433 35667788999999998753333321 1123468998876666 68899
Q ss_pred HHHHHHHHHHHH
Q 010058 450 KVAEFFDAAVKL 461 (519)
Q Consensus 450 ~l~~~l~~~l~~ 461 (519)
.+++.|.+++..
T Consensus 418 ~~~~~~~~~~~~ 429 (431)
T TIGR01788 418 LLIEDIEAALAY 429 (431)
T ss_pred HHHHHHHHHHHh
Confidence 999998888753
No 129
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=2e-22 Score=211.90 Aligned_cols=344 Identities=13% Similarity=0.115 Sum_probs=220.6
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhc--cC-C---CCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCcceE
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNK--YS-E---GYPGARYYGGNEYIDMAESLCQKRALDAFQ----LDPAKWGVNV 146 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~--~~-~---g~p~~~~y~~~~~~~~le~~~~~~~~~~~g----~~~~~~~~~V 146 (519)
..|+|..+||..+..+++...+...+. .. + -.....+|+...+...+++++.+++.+.+| +++ .+|
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~----~~I 114 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP----NKL 114 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh----HHe
Confidence 458999999987665554443322110 00 0 001123355556777888888888888777 355 369
Q ss_pred EeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCcee-eeeeeeEEEeeeeC-CCCCCCCHHHHHHHhhh
Q 010058 147 QSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLD-ESTGYIDYEQLEKSAAL 223 (519)
Q Consensus 147 ~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~-~~g~~~~~v~~~~d-~~~~~iD~d~l~~~i~~ 223 (519)
++|+|++ ++..++.++++|||.|+++++.|+++.. .+. ..|..+..++ .+ .+++.+|++++++++.+
T Consensus 115 iit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g~~~v~v~--~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 115 VLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTGVEIVPIH--CSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCCcEEEEEe--cCCccCCcCCHHHHHHHHHH
Confidence 9999998 8888889999999999999977666532 122 2354444444 43 24578899999988764
Q ss_pred -----hCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCCC-------------CCC
Q 010058 224 -----FRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSPF-------------EYA 279 (519)
Q Consensus 224 -----~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p~-------------~~~ 279 (519)
.++|+|+++ |+| +|...+ +++|.++|+++|++||+|+++.. +...+. ..+.+ ..-
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~-~~f~~~~~~s~l~~~~~~~~~~~~~~~~ 263 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSG-TVFDSPGFVSVMEVLKDRKLENTDVSNR 263 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccc-cccCCCCcccHHHHhhhcccccCCCCCc
Confidence 278988888 777 887776 45677788899999999998642 211110 00000 123
Q ss_pred eEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc--CHhHH
Q 010058 280 DVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK--TPEYK 355 (519)
Q Consensus 280 di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~--~~~~~ 355 (519)
-+++.|++|.+ +|.|.||++++++ .+.+.+... ... +..+.....+++.+++.-. ...++
T Consensus 264 vi~l~S~SK~~~l~GlRiG~li~~~~-------------~l~~~~~~~-~~~--~~~s~~~Q~a~~~~L~~~~~~~~~l~ 327 (468)
T PLN02450 264 VHIVYSLSKDLGLPGFRVGAIYSNDE-------------MVVSAATKM-SSF--GLVSSQTQYLLSALLSDKKFTKNYLE 327 (468)
T ss_pred EEEEEeccccCCCCCccEEEEEECCH-------------HHHHHHHHH-hhc--CCCCHHHHHHHHHHhCCchhHHHHHH
Confidence 47788999975 7999999999863 233333222 111 2233344444444443211 01246
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC----CCc-HHHH-HHhhcccCeEEcccccCCCC-CCCCC
Q 010058 356 AYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK----GID-GSRV-EKVLESVHIAANKNTVPGDV-SAMVP 428 (519)
Q Consensus 356 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~----~~~-~~~~-~~~L~~~gI~v~~~~~p~~~-~~~~~ 428 (519)
+.++++.++++.+.+.|++.|+.+..+ ..+.++|+++... .+. ..++ .++|+++||.+. ||.. +...+
T Consensus 328 ~~~~~l~~rr~~l~~~L~~~gi~~~~~-~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~----PG~~f~~~~~ 402 (468)
T PLN02450 328 ENQKRLKQRQKKLVSGLEAAGIKCLKS-NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNIS----PGSSCHCTEP 402 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccCC-CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEe----CccccCCCCC
Confidence 678888999999999999998876543 3455777776421 111 1223 344567899996 6664 33346
Q ss_pred CeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 429 GGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 429 ~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+++||++.... ++++++.++.|.+++..
T Consensus 403 g~~Rl~f~~~~-----~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 403 GWFRVCFANMS-----EETLDLAMKRLKSFVES 430 (468)
T ss_pred CEEEEEecCCC-----HHHHHHHHHHHHHHHHh
Confidence 89999987533 58899999999888763
No 130
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.91 E-value=3e-23 Score=210.93 Aligned_cols=341 Identities=11% Similarity=0.107 Sum_probs=225.7
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCC--CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc--HH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSE--GYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG--SP 153 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~--g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG--s~ 153 (519)
.+.++|+...+|+.|++|+...+.+..+. |.+... ....++ .++-+.+++.++++||...+. .|.+++| +.
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~-hr~~~f-~~~~~~~~~~l~~l~~~~~~~---~v~~~~gsgt~ 78 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEIS-HRSKEF-EAVAEEAEADLRELLNIPDNY---KVLFLQGGASL 78 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccccCCccccccC-CCCHHH-HHHHHHHHHHHHHHhCCCCCc---EEEEEcCCchH
Confidence 35688999999999999999987542111 111111 112223 355567889999999983222 3555444 34
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHH-HhhhhCCcEEEEc
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEK-SAALFRPKLIVAG 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~-~i~~~k~klIi~~ 232 (519)
++.+++..++.+||++++......++.. .. .....|.. ..+. .++..+..+..++++ .+++ ++++|.++
T Consensus 79 ~~Ea~~~nl~~~g~~~l~i~~G~fg~r~--~~----~a~~~g~~-~~~~--~~~~~g~~~~~~~~~~~l~~-~~~~V~~t 148 (360)
T PRK05355 79 QFAMVPMNLLGGGKKADYVDTGSWSKKA--IK----EAKKYGEV-NVAA--SSEDDGFTYIPPLDEWQLSD-DAAYVHYT 148 (360)
T ss_pred HHHHHHHhcCCCCCeEEEEECCHHHHHH--HH----HHHHhCCc-eEEe--cccccCCCCCCChhhccCCC-CCCEEEEc
Confidence 9999999999999999988743333321 11 12223422 2222 222134444444444 5665 79999888
Q ss_pred --cccccccc-cHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--c
Q 010058 233 --ASAYARLY-DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--E 306 (519)
Q Consensus 233 --~sn~g~~~-d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~ 306 (519)
.+++|... |+++| +|+++++|++++.|..+.++.. .|++++|+||+| ||.| |+++++++.. .
T Consensus 149 h~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~-----~d~~~~ssqK~l-gP~Glg~l~~s~~~l~~~ 216 (360)
T PRK05355 149 SNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSK-----FGLIYAGAQKNI-GPAGLTIVIVREDLLGRA 216 (360)
T ss_pred cCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHH-----ccEEEEeccccc-cCCceEEEEECHHHHhhc
Confidence 44488877 66655 8999999999999988877654 379999999987 6998 9999998642 2
Q ss_pred ccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcCCE-EecCCC
Q 010058 307 INKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERGYD-LVSGGT 384 (519)
Q Consensus 307 ~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~ 384 (519)
.|..+. ..++........ ..+||+.+.+.++.++++++... +++.+.++..++++++.+.|+++|+- .+.+..
T Consensus 217 ~~~~~~--~~~~~~~~~~~~---~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~ 291 (360)
T PRK05355 217 LPSIPS--MLDYKTHADNDS---MYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPE 291 (360)
T ss_pred ccCCCh--HHHHHHHHhcCC---ccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChh
Confidence 232121 122222222222 23799999999999999999888 79999999999999999999999742 222211
Q ss_pred CcceeeeeccCCC-CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 385 ENHLVLVNLRNKG-IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 385 ~~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.....++.+..++ ....++.+.+.+.||.+. ++.. ..+.+|+|+..+++ .+|+++++++|++++..
T Consensus 292 ~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~----~~~~---~~g~vRiS~~~~nt----~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 292 DRSRMNVPFTLADEELDKKFLAEAKAAGLVGL----KGHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFERR 358 (360)
T ss_pred hcCCcEEEEEcCChHHHHHHHHHHHHCCCccc----CCCC---ccCcEEEECCCCCC----HHHHHHHHHHHHHHHHh
Confidence 1111233333322 233455566777899873 3332 23679999999999 99999999999998763
No 131
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1.8e-22 Score=213.14 Aligned_cols=344 Identities=11% Similarity=0.098 Sum_probs=219.7
Q ss_pred cCeeecCCCCCCc-HHHHHHHhhHhh----hc-cCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCcceE
Q 010058 77 KGLELIPSENFTS-VSVMQAVGSVMT----NK-YSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ----LDPAKWGVNV 146 (519)
Q Consensus 77 ~~i~L~a~en~~~-~~V~ea~~~~l~----~~-~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g----~~~~~~~~~V 146 (519)
..|+|...||... +.+.+.+.+... .. -...|+....|+...+..++++++.+++.+.+| ++++ +|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe----~I 122 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE----RV 122 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh----hE
Confidence 3589999999762 222344433221 11 011245555677777888899888899988877 5664 69
Q ss_pred EeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCcee-eeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-
Q 010058 147 QSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKIS-AVSIFFETMPYRLDESTGYIDYEQLEKSAAL- 223 (519)
Q Consensus 147 ~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~-~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~- 223 (519)
++|+|++ |+..++.++++|||.|+++++.|+++... +. ..|..+..+++..+ +++.+|++++++++..
T Consensus 123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~--------~~~~~G~~vv~v~~~~~-~~~~~~~~~le~a~~~a 193 (496)
T PLN02376 123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRD--------LRWRTGVEIIPVPCSSS-DNFKLTVDAADWAYKKA 193 (496)
T ss_pred EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHH--------HHhhCCCEEEEEeCCCC-ccCcCCHHHHHHHHHHH
Confidence 9999998 88889999999999999999777766431 22 23544445554322 3578999999866431
Q ss_pred ----hCCcEEEEc-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCC--C-C-----C--Ce--EE
Q 010058 224 ----FRPKLIVAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP--F-E-----Y--AD--VV 282 (519)
Q Consensus 224 ----~k~klIi~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p--~-~-----~--~d--i~ 282 (519)
.++|+|+++ |+| +|..++. ++|.++|+++|++||+|+++..-.......++. + . . .+ ++
T Consensus 194 ~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~v 273 (496)
T PLN02376 194 QESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHI 273 (496)
T ss_pred HhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEE
Confidence 368988877 877 8888774 567778899999999999965322111111100 0 0 0 12 45
Q ss_pred EEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhH-----H
Q 010058 283 TTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEY-----K 355 (519)
Q Consensus 283 ~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~-----~ 355 (519)
+.|++|.+ +|.|.|+++++++ .+...+...... +..+.....+++..+. ...| .
T Consensus 274 v~S~SK~~glpGlRvG~li~~~~-------------~l~~~~~~~~~~---~~vs~~~Q~a~~~~L~---d~~~~~~~l~ 334 (496)
T PLN02376 274 VYSLSKDMGLPGFRVGIVYSFND-------------SVVSCARKMSSF---GLVSSQTQLMLASMLS---DDQFVDNFLM 334 (496)
T ss_pred EEeccccCCCCcceEEEEEECCH-------------HHHHHHHHHhhc---CCCCHHHHHHHHHHhC---ChhHHHHHHH
Confidence 68999976 7899999999653 333332221111 2223333334343432 2233 3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCC-----C-cHHHHHH-hhcccCeEEcccccCCCC-CCCC
Q 010058 356 AYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKG-----I-DGSRVEK-VLESVHIAANKNTVPGDV-SAMV 427 (519)
Q Consensus 356 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~-----~-~~~~~~~-~L~~~gI~v~~~~~p~~~-~~~~ 427 (519)
+.++++.++++.+.+.|.+.|+.++.+ ..+.++|+++.... . +..++.+ ++++.||.+. ||.. +...
T Consensus 335 ~~r~~l~~r~~~l~~~L~~~gi~~~~~-~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~----pGs~F~~~~ 409 (496)
T PLN02376 335 ESSRRLGIRHKVFTTGIKKADIACLTS-NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVS----PGSSFRCTE 409 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcccCC-CceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEe----CccccCCCC
Confidence 346777888899999999888876654 34577888875321 1 1134444 4456899997 6665 3334
Q ss_pred CCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 428 PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 428 ~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
++++||++.... +++++..++.|.+++...
T Consensus 410 ~g~~Ri~fa~~~-----~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 410 PGWFRICFANMD-----DDTLHVALGRIQDFVSKN 439 (496)
T ss_pred CCEEEEEeeCCC-----HHHHHHHHHHHHHHHHHh
Confidence 689999986432 578888888888887643
No 132
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.91 E-value=3.6e-22 Score=207.62 Aligned_cols=331 Identities=19% Similarity=0.211 Sum_probs=215.5
Q ss_pred CeeecCCCCC----CcHHHHHHHhhHhhhccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPSENF----TSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~en~----~~~~V~ea~~~~l~~~~~~g~p~~~~-y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.+++ +|.++ .+|.|++++.+.+.. +..+..+++. |+..+...++| +.+++++|.+. .++++||+
T Consensus 48 ~~~~-~s~dylgl~~~p~v~~a~~~~~~~-~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~ 116 (407)
T PRK09064 48 VTVW-CSNDYLGMGQHPKVIEAMIEALDR-CGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGY 116 (407)
T ss_pred EEEE-ECCCCcCCCCCHHHHHHHHHHHHH-cCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHH
Confidence 3443 45554 378999999988765 5334334443 33344555566 78888888643 58999999
Q ss_pred HHHHHHHHhhcC--CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh---hCCc
Q 010058 153 PANFQVYTALLK--PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL---FRPK 227 (519)
Q Consensus 153 ~a~~~~~~all~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~---~k~k 227 (519)
.||..++..+.. +++.|+.....|++... ++...+.... .++ ..|++++++.++. .+++
T Consensus 117 ~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~--------~~~~~~~~~~--~~~------~~d~~~le~~l~~~~~~~~~ 180 (407)
T PRK09064 117 VSNDATLSTLAKLIPDCVIFSDELNHASMIE--------GIRRSRCEKH--IFR------HNDVAHLEELLAAADPDRPK 180 (407)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcchHHHHH--------HHHHcCCcEE--EEC------CCCHHHHHHHHHhccCCCCe
Confidence 999988887754 78777766555554432 1222232222 121 1377888887752 3678
Q ss_pred EEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccc-cC--CCC-CCC-CCCeEEEEcCCCcccCCCcceEEe
Q 010058 228 LIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVA-AG--VIP-SPF-EYADVVTTTTHKSLRGPRGAMIFF 300 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~-~~--~~~-~p~-~~~di~~~S~~K~l~GprgG~i~~ 300 (519)
+|+++ +.+ .|...|+++|+++|+++|+++|+|++|..|... .+ ... .++ ...|+++.|++|++ |+.||++++
T Consensus 181 ~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~ 259 (407)
T PRK09064 181 LIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAG 259 (407)
T ss_pred EEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEec
Confidence 88888 333 788999999999999999999999999876532 11 100 111 24689999999988 456799988
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
++ ++.+.+.....+.. .++.+....++...+++.+... ....+++.++++++.+.|.+.|+++
T Consensus 260 ~~--------------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~ 323 (407)
T PRK09064 260 SA--------------ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPV 323 (407)
T ss_pred CH--------------HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 87 44444432222211 1233344445555677766542 3446788999999999999999877
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+.+ ..+++.+.+.. ..+..++.+.| ++.||.++....|. .+.+.+.+||+++..++ ++|++++++.|+++
T Consensus 324 ~~~--~~~iv~i~~~~-~~~~~~l~~~L~~~~gi~v~~~~~p~--~~~~~~~lRis~~~~~t----~edi~~l~~~l~~~ 394 (407)
T PRK09064 324 MPN--ESHIVPVMVGD-PEKCKKASDMLLEEHGIYVQPINYPT--VPRGTERLRITPTPFHT----DEMIDHLVEALVEV 394 (407)
T ss_pred CCC--CCCEEEEEeCC-HHHHHHHHHHHHHhCCEEEeeECCCC--CCCCCceEEEEeCCCCC----HHHHHHHHHHHHHH
Confidence 653 23444444321 12355677766 45799997533232 12234689999998888 99999999999998
Q ss_pred HHH
Q 010058 459 VKL 461 (519)
Q Consensus 459 l~~ 461 (519)
++.
T Consensus 395 ~~~ 397 (407)
T PRK09064 395 WAR 397 (407)
T ss_pred HHH
Confidence 863
No 133
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=1.7e-22 Score=206.74 Aligned_cols=314 Identities=15% Similarity=0.103 Sum_probs=209.9
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCcHH
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS-LSGSP 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~-~sGs~ 153 (519)
+.|+|..++|+ ++|.+.+++.+.+.... +||.. .+ .+++ +.+++++|++++ +|.+ ++|++
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~------~~-~~lr----~~ia~~~~~~~~----~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKIH--RYPEP------DA-PELR----EALSKYTGVPVE----NIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhhc--CCCCC------CH-HHHH----HHHHHHhCCCHH----HEEEeCCCHH
Confidence 55889888775 57888888877665311 34322 22 4444 777788899874 5777 88988
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||+|+++++.+..+.. .....|..+..++ .+ +++.+|++++++.+.. ++++|+++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~~-~~~~~~~~~l~~~~~~-~~~~v~~~ 165 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYEI--------SAKAHGAKPVYAK--RE-EDFSLDVDSVLNAITE-KTKVIFLC 165 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCEEEEee--cC-CCCCcCHHHHHHHhcc-CCCEEEEe
Confidence 6666788889999999998865544322 1223355444444 33 4568999999998876 89988887
Q ss_pred -ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeeccccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKE 306 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~~~~~ 306 (519)
++| +|...+.+++.++|+++|+++|+|++|.. +......+ .+. ...+++.|++|.+ +|.|.||+++++
T Consensus 166 ~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~-~~~~~~~~-~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~---- 239 (361)
T PRK00950 166 TPNNPTGNLIPEEDIRKILESTDALVFVDEAYVE-FAEYDYTP-LALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE---- 239 (361)
T ss_pred CCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhh-hCccchHH-HHHhcCCEEEEEeehHhhcCchhhcchhcCCH----
Confidence 766 89999999999999999999999999753 22111100 001 1247778999977 477889999987
Q ss_pred ccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh-HHHHHHHHHHHHHHHHHHHHhcCCEEecCCCC
Q 010058 307 INKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE-YKAYQEQVLSNSSKFARSLLERGYDLVSGGTE 385 (519)
Q Consensus 307 ~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 385 (519)
++.+.+.....+. +.+....+++..++. ..+ +++..++++++++.+.+.|. +.+.. +.
T Consensus 240 ----------~~~~~~~~~~~~~---~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~---~~~~~--~~ 298 (361)
T PRK00950 240 ----------WLIDYYMRAKTPF---SLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP---FKVYP--SE 298 (361)
T ss_pred ----------HHHHHHHHhcCCC---CCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC---eeECC--Cc
Confidence 5555444332222 122333333333433 333 46667777777777777665 44433 33
Q ss_pred cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 386 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 386 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+.++|+.+ .+.+..++.+.|.++||.++ |+.. +...+++||+++. + .+|+++++++|++++
T Consensus 299 ~~~i~~~~--~~~~~~~~~~~l~~~gv~v~----~~~~f~~~~~~~lRis~~---~----~~~~~~l~~~L~~il 360 (361)
T PRK00950 299 ANFVLVDV--TPMTAKEFCEELLKRGVIVR----DCTSFRGLGDYYIRVSIG---T----FEENERFLEILKEIV 360 (361)
T ss_pred ceEEEEEC--CCCCHHHHHHHHHHCCEEEe----eCCccCCCCCCeEEEECC---C----HHHHHHHHHHHHHHh
Confidence 45677776 34578888888888999997 4332 2234578999976 3 689999999998875
No 134
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.91 E-value=3.6e-22 Score=207.24 Aligned_cols=328 Identities=19% Similarity=0.191 Sum_probs=216.3
Q ss_pred cCCCCCC----cHHHHHHHhhHhhhccCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHH
Q 010058 82 IPSENFT----SVSVMQAVGSVMTNKYSEGYPGARYY-GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 82 ~a~en~~----~~~V~ea~~~~l~~~~~~g~p~~~~y-~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~ 156 (519)
..|.++. +|.|++|+.+.+.. |..+..++|.. +..+...++| +.+++++|.+. .+.++||+.||.
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~~~~~-~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG~~an~ 119 (402)
T TIGR01821 50 WCSNDYLGMGQHPEVLQAMHETLDK-YGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSGYVAND 119 (402)
T ss_pred eEccCcCCCCCCHHHHHHHHHHHHH-cCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECchHHHHH
Confidence 3455653 78999999998865 54344444432 3344455555 88889999653 599999999999
Q ss_pred HHHHhhcC--CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh---hCCcEEEE
Q 010058 157 QVYTALLK--PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL---FRPKLIVA 231 (519)
Q Consensus 157 ~~~~all~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~---~k~klIi~ 231 (519)
.++..+.. +||.|+.....|++.... +...|..... ++ ..|++++++.++. .++++|++
T Consensus 120 ~ai~~l~~~~~~~~v~~~~~~h~s~~~~--------~~~~g~~~~~--~~------~~d~~~l~~~l~~~~~~~~~~v~~ 183 (402)
T TIGR01821 120 ATLATLAKIIPGCVIFSDELNHASMIEG--------IRHSGAEKFI--FR------HNDVAHLEKLLQSVDPNRPKIIAF 183 (402)
T ss_pred HHHHHhhCCCCCCEEEEcchHhHHHHHH--------HHHcCCeEEE--EC------CCCHHHHHHHHHhccCCCCeEEEE
Confidence 88888765 788877766566554432 2223332221 21 2367778777753 25788888
Q ss_pred c-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhcccc---CCCC-CCC-CCCeEEEEcCCCcccCCCcceEEeeccc
Q 010058 232 G-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAA---GVIP-SPF-EYADVVTTTTHKSLRGPRGAMIFFRKGV 304 (519)
Q Consensus 232 ~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~---~~~~-~p~-~~~di~~~S~~K~l~GprgG~i~~~~~~ 304 (519)
+ +.| +|...|+++|+++|+++|+++|+|++|..|.... +... .++ ...|+++.|++|++++ .||++++++
T Consensus 184 e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~GG~i~~~~-- 260 (402)
T TIGR01821 184 ESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGV-VGGYIAASR-- 260 (402)
T ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhcc-CCceeecCH--
Confidence 8 444 7899999999999999999999999998775421 1111 111 1468999999999854 468988887
Q ss_pred ccccccCcchhhhHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGG 383 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 383 (519)
++.+.+.....+.. .++.+...+++..++++.+... +...++..++++++.+.|++.|++++.+
T Consensus 261 ------------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~- 325 (402)
T TIGR01821 261 ------------KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIPN- 325 (402)
T ss_pred ------------HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC-
Confidence 44544432211211 2334454556666777766542 4556667789999999999999876653
Q ss_pred CCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
..+++.+.+.. .....++.+.| ++.||.++....|.- +.+.+.|||+++..++ ++|++++++.|+++++.
T Consensus 326 -~~~i~~i~~~~-~~~a~~~~~~L~~~~Gi~v~~~~~p~~--~~g~~~lRis~~~~~t----~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 326 -PSHIVPVIIGD-AALCKKVSDLLLNKHGIYVQPINYPTV--PRGTERLRITPTPAHT----DKMIDDLVEALLLVWDR 396 (402)
T ss_pred -CCCEEEEEeCC-HHHHHHHHHHHHhcCCEEEEeECCCCC--CCCCceEEEEeCCCCC----HHHHHHHHHHHHHHHHH
Confidence 23344443321 11245566766 467999975333321 2334689999999888 89999999999998763
No 135
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.91 E-value=3e-22 Score=204.35 Aligned_cols=318 Identities=13% Similarity=0.131 Sum_probs=205.5
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.++|..++|+ +|+.+++++.+.+.. . ..||.. ....++ +.++++++++++ +|++++|++
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~~-------~~~~lr----~~ia~~~~~~~~----~i~it~Ga~~ 83 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPDV-------EYRHLH----QALARHHQVPAS----WILAGNGETE 83 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcCc-------cHHHHH----HHHHHHhCcChh----hEEECCCHHH
Confidence 45889889886 688999999887654 2 133321 234444 777788899874 699999998
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
++..++.++ .||| ++++++.+..+.. .+...|..+..+++.. .+++.+| +++++.+.+ ++|+|+++
T Consensus 84 ~l~~~~~~l-~~g~-viv~~P~y~~~~~--------~~~~~g~~~~~v~~~~-~~~~~~~-~~~~~~~~~-~~k~v~l~~ 150 (356)
T PRK08056 84 SIFAVVSGL-KPRR-AMIVTPGFAEYRR--------ALQQVGCEIRRYSLRE-ADGWQLT-DAILEALTP-DLDCLFLCT 150 (356)
T ss_pred HHHHHHHHh-CCCC-EEEeCCCcHHHHH--------HHHHcCCeEEEEeccc-ccCCCcc-HHHHHhccC-CCCEEEEeC
Confidence 776666665 7887 5556644333221 2334465555555421 1345666 455556654 89999887
Q ss_pred ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCCCC--CCeEEEEcCCCcc--cCCCcceEEeecc
Q 010058 233 ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKG 303 (519)
Q Consensus 233 ~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~~ 303 (519)
++| +|...+ +++|.++|+++++++|+|+++. ++...+. ....+. ...+++.|+||++ +|.|.||++++++
T Consensus 151 p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~ 229 (356)
T PRK08056 151 PNNPTGLLPERQLLQAIAERCKSLNIALILDEAFI-DFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD 229 (356)
T ss_pred CcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchh-ccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCH
Confidence 777 888888 7788889999999999999853 2221110 000111 3568889999975 6788899998542
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhH-HHHHHHHHHHHHHHHHHHHhc-CCEEec
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEY-KAYQEQVLSNSSKFARSLLER-GYDLVS 381 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 381 (519)
++.+.+.....+ .+++.....+...++ ....+ ++..++++++++.+.+.|+++ |+.+..
T Consensus 230 -------------~~~~~l~~~~~~---~~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 290 (356)
T PRK08056 230 -------------AAVARMRRQQMP---WSINAFAALAGEVIL---QDRAYQQATWQWLAEEGARFYQALCALPLLTVWP 290 (356)
T ss_pred -------------HHHHHHHHhCCC---CchhHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC
Confidence 344444332211 122222222222233 23334 566788899999999999887 776654
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+ .+.++|+.+.. +..++.+.|.++||.++ |++. ....+++|||++. + +++++++.++|+++++
T Consensus 291 ~--~~~~~~~~~~~---~~~~~~~~l~~~gI~v~----~~~~f~~~~~~~iRis~~---~----~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 291 G--RANYLFLRCER---PDIDLQRALLTQRILIR----SCANYPGLDSRYYRVAIR---S----AAENERLLAALRNVLT 354 (356)
T ss_pred C--CCcEEEEEcCC---ChHHHHHHHHHCCeEEE----ECCCCCCCCCCEEEEEEc---C----HHHHHHHHHHHHHHHc
Confidence 3 35566776642 35678888888999997 4443 2233568999965 3 7899999999988764
No 136
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.91 E-value=4.1e-23 Score=209.93 Aligned_cols=283 Identities=17% Similarity=0.155 Sum_probs=198.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCcHH-HHHHHHHhhcC------------CC--CEEEEecCCCc
Q 010058 114 YGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSLSGSP-ANFQVYTALLK------------PH--ERIMALDLPHG 177 (519)
Q Consensus 114 y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~sGs~-a~~~~~~all~------------pG--D~Vl~~~~~~~ 177 (519)
|+......++|+.+++++++++|++ .+. ++.+++|++ ++..++.++.. +| +.|++++..|.
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~---~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~ 106 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSEDA---DGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHV 106 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCCC---CEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchh
Confidence 4555677899999999999999996 322 466777776 88877777642 33 36777776776
Q ss_pred ccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CCcEEEEc-ccc-ccccccHHHHHHHHh
Q 010058 178 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-----RPKLIVAG-ASA-YARLYDYARIRKVCD 250 (519)
Q Consensus 178 ~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~klIi~~-~sn-~g~~~d~~~i~~ia~ 250 (519)
++... +...|..+..++ .++ ++.+|+++|++++++. +|++|+++ ++| +|...|+++|.++|+
T Consensus 107 ~~~~~--------~~~~g~~~~~v~--~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~ 175 (345)
T cd06450 107 SVEKA--------AAYLDVKVRLVP--VDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAE 175 (345)
T ss_pred HHHHH--------HHHHhcCeEEee--eCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHH
Confidence 65332 222354455554 443 3589999999998752 67777777 555 899999999999999
Q ss_pred hcCCEEEehhhhhhhccccCCCC---CCCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcc
Q 010058 251 KQKAVMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAV 326 (519)
Q Consensus 251 ~~~~~livD~ah~~g~~~~~~~~---~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~ 326 (519)
++|+++++|++|..+........ ..+.++|++++|+||++.+|.+ |+++.+
T Consensus 176 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~------------------------- 230 (345)
T cd06450 176 KYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR------------------------- 230 (345)
T ss_pred HhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-------------------------
Confidence 99999999999887765432111 1223689999999999887765 655321
Q ss_pred cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCC---CCcHHH
Q 010058 327 FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNK---GIDGSR 402 (519)
Q Consensus 327 ~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~---~~~~~~ 402 (519)
+.++.++++.+...++++..++..++++++.+.|.+. |+.++.+. +..++.+.+.+. +++..+
T Consensus 231 ------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~iv~f~~~~~~~~~~~~~~ 297 (345)
T cd06450 231 ------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-NLSLVCFRLKPSVKLDELNYD 297 (345)
T ss_pred ------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceeEEEEEECCcchhhHHHHH
Confidence 3445556666666788999999999999999999988 77776532 334555544331 245667
Q ss_pred HHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcc-ccCCCCHHHHHHHHHHHHH
Q 010058 403 VEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPAL-TSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 403 ~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~-ttrg~~~~di~~l~~~l~~ 457 (519)
+.+.|.+.|+.+. ++.... .++.+|++++.. ++ ++|++++++.|++
T Consensus 298 i~~~L~~~g~~~~----~~~~~~-~~~~lRis~~~~~~t----~~di~~l~~~l~~ 344 (345)
T cd06450 298 LSDRLNERGGWHV----PATTLG-GPNVLRFVVTNPLTT----RDDADALLEDIER 344 (345)
T ss_pred HHHHHHhcCCEEE----EeeEEC-CeEEEEEEecCCCCC----HHHHHHHHHHHHh
Confidence 8888888755442 111101 356899999876 47 8999999999875
No 137
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.91 E-value=6.7e-22 Score=205.51 Aligned_cols=348 Identities=14% Similarity=0.109 Sum_probs=215.4
Q ss_pred HHHHHHHHHHHh--cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 010058 63 EIADIIELEKAR--QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD 138 (519)
Q Consensus 63 ~~~~~~~~e~~~--~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~ 138 (519)
++...+.+.... ..+.++|..+++. +++.+.+++.+.+..... .+....|+...+...+++.+.+++.+..|.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~ 96 (409)
T PRK07590 19 EIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGT--AETFRGYGPEQGYDFLREKIAENDYQARGCD 96 (409)
T ss_pred HHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccc--cCCccCCCCCCCCHHHHHHHHHHHHHhcCCc
Confidence 344444443332 2356889888875 578889998887764210 0111234444566778877777777666653
Q ss_pred CCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee---------eEEEeeeeCCC
Q 010058 139 PAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF---------FETMPYRLDES 208 (519)
Q Consensus 139 ~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~---------~~~v~~~~d~~ 208 (519)
.+. .+|++|+|++ ++.. +..+++|||+|++.++.+..+.... ...|.. .+.++++++.+
T Consensus 97 ~~~--~~I~it~Ga~~al~~-l~~~~~~gd~V~v~~P~Y~~~~~~~--------~~~g~~~~~~~~~~~~~~~~v~~~~~ 165 (409)
T PRK07590 97 ISA--DEIFISDGAKCDTGN-ILDIFGPDNTIAVTDPVYPVYVDTN--------VMAGRTGEANEDGRYSGIVYLPCTAE 165 (409)
T ss_pred CCh--hhEEECCCHHHHHHH-HHHhcCCCCEEEEeCCCCcchHHHH--------HHcCCcccccccccccceeEeecccc
Confidence 222 3699999998 6664 5567899999999997776664422 222332 11334445432
Q ss_pred -CCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C--
Q 010058 209 -TGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E-- 277 (519)
Q Consensus 209 -~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~-- 277 (519)
++.+|.++ .++|+|+++ |+| +|..++. ++|.++|++||++||+|+++.. +...+..+.++ +
T Consensus 166 ~~~~~d~~~-------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~-~~~~~~~~~~~~~~~~~ 237 (409)
T PRK07590 166 NNFVPELPE-------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEA-FISDPSLPHSIYEIEGA 237 (409)
T ss_pred cCCcccCcc-------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchh-hccCCCCCcchhhCCCc
Confidence 34455331 389999887 777 8877775 5667778999999999998652 22222111111 1
Q ss_pred -CCeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHH------------hhhcccCCCCCCccHHHHHHH
Q 010058 278 -YADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDK------------INQAVFPGLQGGPHNHTISGL 342 (519)
Q Consensus 278 -~~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~------------i~~~~~~~~~g~~~~~~iaal 342 (519)
...|++.|++|++ +|.|.||++++++ +.+. +...... ...+++.....++
T Consensus 238 ~~~vi~~~SfSK~~~~pGlRiG~~i~~~~--------------li~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~a~ 302 (409)
T PRK07590 238 RECAIEFRSFSKTAGFTGTRCAYTVVPKE--------------LKGKTSDGEGVSLNSLWNRRQST-KFNGVSYIVQRAA 302 (409)
T ss_pred ccceEEEecCccccCCcCceeEEEEcCHH--------------HhhhccccchhhhHHHHHHHHhh-cccCcCHHHHHHH
Confidence 1346788999976 7889999999873 3321 1111111 1122333344444
Q ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCC
Q 010058 343 AVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPG 421 (519)
Q Consensus 343 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~ 421 (519)
..++..-....+++.+++++++++.+.+.|++.|+.+..+ ..+.++|+.+.. +++..++...| ++.||.+. ||
T Consensus 303 ~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~g~~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~----pg 376 (409)
T PRK07590 303 EAVYSPEGKAQIKELIDYYMENAKIIREGLESAGFEVYGG-VNAPYIWVKTPD-GMSSWDFFDKLLQEANVVGT----PG 376 (409)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC-CcceEEEEECCC-CCCHHHHHHHHHHHCCEEEe----Ch
Confidence 4455421223457778889999999999999988776543 345677887754 45566666554 56899996 55
Q ss_pred CC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 422 DV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 422 ~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
.. +....+++||++. .+ ++++++.++.|.++
T Consensus 377 ~~f~~~~~~~iRi~~~--~~----~~~l~~~l~rl~~~ 408 (409)
T PRK07590 377 SGFGPSGEGYFRLSAF--GS----RENVLEAMERIKKA 408 (409)
T ss_pred hHhCCCCCCEEEEEcc--CC----HHHHHHHHHHHHhh
Confidence 54 3334578999852 34 68888888888664
No 138
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=1.9e-22 Score=203.80 Aligned_cols=304 Identities=15% Similarity=0.128 Sum_probs=195.1
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHE 167 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD 167 (519)
.|.+.++..+.+.. | | |..+...++ ++.+++++|++++ ++++++|+. ||..++.++++|||
T Consensus 35 ~~~~~~~~~~~~~~-~--~-------g~~~~~~~L----e~~lA~~~g~~~e----~ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 35 GFKIDEEDLELLET-Y--V-------GPAIFEEKV----QELGREHLGGPEE----KILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred ChhHHHHHHHHHHH-h--c-------CCHHHHHHH----HHHHHHHcCCCcc----eEEEECCHHHHHHHHHHHhCCCCC
Confidence 67888887777655 4 1 122334444 4999999999764 477777776 99999999999999
Q ss_pred EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-cccc---ccHH
Q 010058 168 RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YARL---YDYA 243 (519)
Q Consensus 168 ~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~---~d~~ 243 (519)
+|+++.++...|.+... .+.+.|..+ +. . .|+++++. .+ ++++|++++++ .|.. .+++
T Consensus 97 ~Vli~~~d~p~~~s~~~-----~~~l~ga~~--~~--~------~~l~~l~~--~~-~~~lIiitg~s~~G~v~~~~~L~ 158 (346)
T TIGR03576 97 KVVHYLPEKPAHPSIPR-----SCKLAGAEY--FE--S------DELSELKK--ID-GTSLVVITGSTMDLKVVSEEDLK 158 (346)
T ss_pred EEEECCCCCCCchhHHH-----HHHHcCCEE--ec--c------CCHHHHhh--Cc-CceEEEEECCCCCCcccCHHHHH
Confidence 99976444444432111 333444432 11 1 24555432 23 68888887433 6766 6789
Q ss_pred HHHHHHhhcCCEEEehhhhhhhcccc-CCCCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHh
Q 010058 244 RIRKVCDKQKAVMLADMAHISGLVAA-GVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKI 322 (519)
Q Consensus 244 ~i~~ia~~~~~~livD~ah~~g~~~~-~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i 322 (519)
+|.++|+++|++|++|+||..|.... +..+..-.+.|++++|++|+|+|+|+||+++++ ++.+.+
T Consensus 159 ~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r~G~v~~~~--------------~li~~l 224 (346)
T TIGR03576 159 RVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPRGGLLAGRK--------------ELVDKI 224 (346)
T ss_pred HHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccceEEEEeCH--------------HHHHHH
Confidence 99999999999999999998765321 111100014689999999999999999999998 566655
Q ss_pred hhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHH
Q 010058 323 NQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSR 402 (519)
Q Consensus 323 ~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~ 402 (519)
.....+...+ .+....++..++|+... .+..++.+.++++.+.+.+.+ +.+... ...++++++... -+.+.
T Consensus 225 ~~~~~~~~~s-~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~--~~~f~~~~~~~~-~~~~~ 295 (346)
T TIGR03576 225 KSVGEQFGLE-AQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVERT--PTGFVIKGVEEE-KLIEI 295 (346)
T ss_pred HHhhcCcccC-ccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCcC--CCeEEEEeCCCC-CHHHH
Confidence 5543343332 34445566666776432 345567777777777777774 443332 233677776431 12356
Q ss_pred HHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccc-cCCCCHHHHHHHHHHHHHHH
Q 010058 403 VEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALT-SRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 403 ~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~t-trg~~~~di~~l~~~l~~~l 459 (519)
+.+.|++.||.++ |+...+..++++||++.... + ..+++.++++|++.+
T Consensus 296 ~~~ll~~~gV~v~----~~~~f~~~~~~vRis~~~~~~~----~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 296 GLDLLRNYGIITI----TAVGMPGASKTLRFDLAAKDAE----RIGDDYLVEAVKDSL 345 (346)
T ss_pred HHHHHHhCCEEEe----CCcccCCCCCeEEEEEecChHH----hcCHHHHHHHHHhcc
Confidence 7788889999997 54421223578999865311 1 127999999987654
No 139
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.91 E-value=1e-22 Score=207.26 Aligned_cols=335 Identities=15% Similarity=0.121 Sum_probs=213.6
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCc---hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc-HH-
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGN---EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG-SP- 153 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~---~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG-s~- 153 (519)
++++|+...+|+.|++|+.+.+.+ + ++++...|.-+ ....++-+.+++.++++||++.+. +|++++| ++
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~--~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~---~vvf~~gs~T~ 74 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-F--NGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY---KVLFLQGGATG 74 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-c--ccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCchH
Confidence 468899999999999999998865 4 24443223322 223355568889999999984322 5777766 55
Q ss_pred HHHHHHHhhcC---CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCC-HHHHHHHhhhhCCcEE
Q 010058 154 ANFQVYTALLK---PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYID-YEQLEKSAALFRPKLI 229 (519)
Q Consensus 154 a~~~~~~all~---pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD-~d~l~~~i~~~k~klI 229 (519)
++.+++.+++. +||.|++-. +.+.+.. ...-.|..++.++. ++++...+ .+..+..+++ ++++|
T Consensus 75 a~~~~~~~l~~~~~~~~~i~~g~------~~~~~~~---~a~~~g~~~~~~~~--~~~g~~~~~~~~~~~~~~~-~~~lV 142 (355)
T cd00611 75 QFAAVPLNLLGDKGTADYVVTGA------WSAKAAK---EAKRYGGVVVIVAA--KEEGKYTKIPDVETWDLAP-DAAYV 142 (355)
T ss_pred HHHHHHHhcCCCCCeEEEEECCH------HHHHHHH---HHHhcCCCcEEEec--ccccCCCCCCCHhhcCCCC-CCCEE
Confidence 88889999987 455554311 1111100 01112444555543 21111213 2222233444 89999
Q ss_pred EEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc-
Q 010058 230 VAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK- 305 (519)
Q Consensus 230 i~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~- 305 (519)
.++ .+| +|...+ ++++.+|+++++|++|++|..+.++... |++.+|.||+| ||.| |+++++++..
T Consensus 143 ~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~-----~~~~ss~~K~l-GP~G~g~l~~~~~~~~ 211 (355)
T cd00611 143 HYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKF-----GVIYAGAQKNL-GPAGVTVVIVRKDLLG 211 (355)
T ss_pred EEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHh-----CEEEeeccccc-CCCceEEEEECHHHHh
Confidence 888 444 776532 5666799999999999999998777544 56667799976 7998 9999988642
Q ss_pred -cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhc-CCEEecC
Q 010058 306 -EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLER-GYDLVSG 382 (519)
Q Consensus 306 -~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 382 (519)
..|...... ++....+. .+ ..+||+.+.+.++.+|++++... +++.+.++.+++++++.+.|+++ |+.....
T Consensus 212 ~~~~~~~~~~--~~~~~~~~--~~-~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~ 286 (355)
T cd00611 212 KARKITPSML--NYKTHADN--NS-LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPV 286 (355)
T ss_pred hcccCCCCcc--cHHHHHhc--CC-CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCC
Confidence 222111100 11111111 11 24899999999999999999888 79999999999999999999999 8521111
Q ss_pred CCCcce-eeeeccCCCC-cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 383 GTENHL-VLVNLRNKGI-DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 383 ~~~~~~-~~v~~~~~~~-~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
....+. .++.+...+. ...++...+.+.|+.+. ++.. ..+.+|+|+..++| ++|+++++++|+++
T Consensus 287 ~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~----~~~~---~~g~vR~S~~~~nt----~edi~~l~~al~~~ 353 (355)
T cd00611 287 DKRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGL----KGHR---SVGGIRASIYNALS----LEGVQALADFMKEF 353 (355)
T ss_pred CHHHcCceEEEEEcCChhhhHHHHHHHHHCCCccc----CCCc---ccCeEEEEccCCCC----HHHHHHHHHHHHHH
Confidence 111222 3344443332 11334356667888642 3332 23689999999999 99999999999874
No 140
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.91 E-value=7.1e-22 Score=207.79 Aligned_cols=309 Identities=16% Similarity=0.134 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeE
Q 010058 122 MAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 199 (519)
Q Consensus 122 ~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 199 (519)
+.....++++++++|++.+ ++.+++|++ ++.+++.++ .++||+|++++..|+++....... ....|..++
T Consensus 112 ~~~~e~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~----~~~~G~~~~ 183 (447)
T PRK00451 112 QAIFEYQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTY----LKGQGIEVV 183 (447)
T ss_pred HHHHHHHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHH----HHhCCcEEE
Confidence 3334445788999999874 688999988 666777787 589999999998887765432210 011344455
Q ss_pred EEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cccccccccHHHHHHHHhhcCCEEEe--hhhhhhhccccCCCCCCC
Q 010058 200 TMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASAYARLYDYARIRKVCDKQKAVMLA--DMAHISGLVAAGVIPSPF 276 (519)
Q Consensus 200 ~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn~g~~~d~~~i~~ia~~~~~~liv--D~ah~~g~~~~~~~~~p~ 276 (519)
.++ .++ + .+|++++++++++ ++++|+++ ++.+|...|+++|.++|+++|+++++ |.. ..|.+... ...
T Consensus 184 ~v~--~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~-~~~-- 254 (447)
T PRK00451 184 EVP--YED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPP-GEY-- 254 (447)
T ss_pred Eec--CCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCc-ccC--
Confidence 554 443 4 8999999999987 89999988 53389999999999999999999998 644 33333211 112
Q ss_pred CCCeEEEEcCCCc-----ccCCCcceEEeecccc--ccc-ccCcch------hhhH-----HHHhhhcccCCCCCCccHH
Q 010058 277 EYADVVTTTTHKS-----LRGPRGAMIFFRKGVK--EIN-KQGQEV------MYAY-----EDKINQAVFPGLQGGPHNH 337 (519)
Q Consensus 277 ~~~di~~~S~~K~-----l~GprgG~i~~~~~~~--~~~-~~g~~~------~~~~-----~~~i~~~~~~~~~g~~~~~ 337 (519)
++|++++|+||+ ++||+.|+++++++.. +.+ ..|.+. .+.+ ...+.........+++...
T Consensus 255 -~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (447)
T PRK00451 255 -GADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQAL 333 (447)
T ss_pred -CCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHH
Confidence 789999999885 7889889999887531 111 111110 0000 0000000000011111112
Q ss_pred HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcc
Q 010058 338 TISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANK 416 (519)
Q Consensus 338 ~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~ 416 (519)
...+.+.+++.+...++++..+++.++++++.+.|+++ |+++. ++...+.+.+++ +.+..++.+.|.+.||.+.
T Consensus 334 ~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~v~~---~~~~~~~~~~L~~~gi~~~- 408 (447)
T PRK00451 334 NALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-DGPFFNEFVVRL---PKPAEEVNEALLEKGILGG- 408 (447)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CCCeEEEEEEec---CCCHHHHHHHHHhcCCCCC-
Confidence 21233335566666788999999999999999999998 67775 222112222443 2356788888988888753
Q ss_pred cccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 417 NTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 417 ~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+++.. .+...+.+|++++.++| ++|++++++.|.+++
T Consensus 409 --~~~~~~~~~~~~~~rvs~~~~~t----~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 409 --YDLGRYYPELGNHLLVCVTEKRT----KEDIDALVAALGEVL 446 (447)
T ss_pred --cccccccCCcCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 23332 22224689999998888 899999999998764
No 141
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.91 E-value=2e-21 Score=201.49 Aligned_cols=341 Identities=16% Similarity=0.099 Sum_probs=217.2
Q ss_pred ccCeeecCCCC------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEE
Q 010058 76 WKGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ--LDPAKWGVNVQ 147 (519)
Q Consensus 76 ~~~i~L~a~en------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g--~~~~~~~~~V~ 147 (519)
++.++|..+++ ++++.+++++.+.+......+ |+...+..++++++.+++.+. + +++ .+|.
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------Y~~~~g~~~lr~aia~~~~~~-~~~~~~----~~i~ 99 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNG------YAPTVGALSAREAIASYYHNP-DGPIEA----DDVV 99 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCC------CCCCCCCHHHHHHHHHHHhhc-CCCCCH----HHEE
Confidence 45688876654 467889999988776521112 333344566775555555442 3 344 3699
Q ss_pred eCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCC
Q 010058 148 SLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRP 226 (519)
Q Consensus 148 ~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~ 226 (519)
+++|++ ++..++.++++|||+|+++++.+..+.. .....|..+..++++.+ +++.+|++.+++.+.+ ++
T Consensus 100 ~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~--------~~~~~g~~v~~~~~~~~-~~~~~d~~~l~~~~~~-~~ 169 (401)
T TIGR01264 100 LCSGCSHAIEMCIAALANAGQNILVPRPGFPLYET--------LAESMGIEVKLYNLLPD-KSWEIDLKQLESLIDE-KT 169 (401)
T ss_pred ECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHH--------HHHHcCCEEEEeecCCc-cCCCCCHHHHHHHhcc-Cc
Confidence 999998 8888889999999999999866654432 22334554445543222 3578999999998876 78
Q ss_pred cEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C-C-CeEEEEcCCCc--ccCCC
Q 010058 227 KLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E-Y-ADVVTTTTHKS--LRGPR 294 (519)
Q Consensus 227 klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~-~-~di~~~S~~K~--l~Gpr 294 (519)
++|+++ ++| +|...+ +++|.++|+++|+++|+|+++. .+...+....++ . . --+++.|++|. ++|.|
T Consensus 170 ~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlR 248 (401)
T TIGR01264 170 AALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYG-DMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWR 248 (401)
T ss_pred eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhh-hhccCCcccccHHHcCCCCcEEEEccCcccCCCccce
Confidence 988887 666 787765 7788889999999999999954 333222111111 1 1 24778899996 58889
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
.||+++++..... .++.+.+.....+ ..+++.....++..++.......+++.++++.++++.+.+.|++
T Consensus 249 iG~iv~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~ 318 (401)
T TIGR01264 249 LGWIIIHDRRGIL--------RDIRDGLVKLSQR--ILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAA 318 (401)
T ss_pred EEEEEecCcchhH--------HHHHHHHHHHhhc--cCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999987521000 0222322222111 11233334444455554322344578888999999999999999
Q ss_pred c-CCEEecCCCCcceeeeeccC----CCCcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHH
Q 010058 375 R-GYDLVSGGTENHLVLVNLRN----KGIDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF 448 (519)
Q Consensus 375 ~-g~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di 448 (519)
. |+.+..+ ..+.++|+.+.. ...+..++.+.| ++.||.+. ||... ..++++||++.. . ++++
T Consensus 319 ~~~~~~~~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~----pg~~f-~~~~~iRis~~~--~----~~~l 386 (401)
T TIGR01264 319 VPGLRPVMP-SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCL----PGSCF-EYPGFFRVVLTV--P----VVMM 386 (401)
T ss_pred CCCCcccCC-CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEe----Cchhc-CCCCeEEEEEcC--C----HHHH
Confidence 8 7664443 345677777642 122455665554 67999996 55431 135789999763 3 5788
Q ss_pred HHHHHHHHHHHH
Q 010058 449 EKVAEFFDAAVK 460 (519)
Q Consensus 449 ~~l~~~l~~~l~ 460 (519)
++.++.|.++++
T Consensus 387 ~~~l~rl~~~~~ 398 (401)
T TIGR01264 387 EEACSRIQEFCE 398 (401)
T ss_pred HHHHHHHHHHHh
Confidence 888888877664
No 142
>PLN02231 alanine transaminase
Probab=99.91 E-value=1.1e-21 Score=208.30 Aligned_cols=360 Identities=12% Similarity=0.066 Sum_probs=224.5
Q ss_pred hhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC
Q 010058 58 EEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL 137 (519)
Q Consensus 58 ~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~ 137 (519)
.+.++..+..+.... ...+.|+|.+++...|..+++...+.+.+.. | .....|+...+...+++.+.+++.+..|.
T Consensus 112 ~~~~~~~~r~v~~~~-~~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~--~-~~~~~Y~~s~G~~~lReaIA~~~~~r~g~ 187 (534)
T PLN02231 112 GQQPITFFREVLALC-DHPSLLDKSETHGLFSADAIERAWQILDQIP--G-RATGAYSHSQGIKGLRDAIAAGIEARDGF 187 (534)
T ss_pred CCCccHHHHHHHHhc-cCCccCCCCCccccCCHHHHHHHHHHHHhcC--C-ccccCcCCCCCcHHHHHHHHHHHHhccCC
Confidence 344555555554432 2235577766666667777777777665421 1 11223667788889998888999887786
Q ss_pred CCCCCcceEEeCCcHH-HHHHHHHhhc-CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCH
Q 010058 138 DPAKWGVNVQSLSGSP-ANFQVYTALL-KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDY 214 (519)
Q Consensus 138 ~~~~~~~~V~~~sGs~-a~~~~~~all-~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~ 214 (519)
+.+. .+|++|+|++ ++..++.+++ .|||.|+++++.|..+.. .+...|..+. +++++++ +|.+|+
T Consensus 188 ~~~p--e~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~--------~~~~~g~~~v--~~~l~~~~~~~~d~ 255 (534)
T PLN02231 188 PADP--NDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSA--------SIALHGGTLV--PYYLDEATGWGLEI 255 (534)
T ss_pred CCCc--ccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHH--------HHHHcCCEEE--EEecCcccCCCCCH
Confidence 4322 4699999998 8888888888 489999999977766543 2334454444 4445543 578999
Q ss_pred HHHHHHhhhh-----CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhcccc-CCCCCCC-------
Q 010058 215 EQLEKSAALF-----RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAA-GVIPSPF------- 276 (519)
Q Consensus 215 d~l~~~i~~~-----k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~-~~~~~p~------- 276 (519)
++|++++++. ++|+|+++ |+| +|..++ +++|.++|+++|++||+|+++.. ++.. +....++
T Consensus 256 ~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~-l~y~~~~~~~s~~~~~~~~ 334 (534)
T PLN02231 256 SELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQE-NVYVPDKKFHSFKKVARSM 334 (534)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCcccHHHHHhhh
Confidence 9999988652 57877766 777 887775 56778889999999999998643 2221 1111011
Q ss_pred --C--C-CeEEEEcCCCcc---cCCCcceEEee--cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHH
Q 010058 277 --E--Y-ADVVTTTTHKSL---RGPRGAMIFFR--KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVAL 346 (519)
Q Consensus 277 --~--~-~di~~~S~~K~l---~GprgG~i~~~--~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al 346 (519)
. . .-+++.|++|.+ +|+|+||+++. ++ ++.+.+.+..... .++ +.....+...++
T Consensus 335 g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~-------------~l~~~l~k~~~~~-~~s-~~~~Q~~~~~~l 399 (534)
T PLN02231 335 GYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTS-------------DVREQIYKVASVN-LCS-NISGQILASLVM 399 (534)
T ss_pred ccccCCceEEEEeccCcccccCCccceEEEEEecCCH-------------HHHHHHHHHHhhh-cCC-ChHHHHHHHHHh
Confidence 0 1 135567999964 59999999863 21 4444443322111 122 223333333333
Q ss_pred HHh--cCHhH-------HHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCC--CC---------cHHHH-H
Q 010058 347 KQV--KTPEY-------KAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNK--GI---------DGSRV-E 404 (519)
Q Consensus 347 ~~~--~~~~~-------~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~--~~---------~~~~~-~ 404 (519)
... .+..| +...+.+.++++.+.+.|++. |+.+..+ ..+.+.|+++..+ .+ +...+ .
T Consensus 400 ~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p-~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~ 478 (534)
T PLN02231 400 SPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKA-EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCK 478 (534)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHH
Confidence 210 01122 234577899999999999988 8877554 3455666444311 11 12223 4
Q ss_pred HhhcccCeEEcccccCCCC-CC-CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 405 KVLESVHIAANKNTVPGDV-SA-MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 405 ~~L~~~gI~v~~~~~p~~~-~~-~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.+|++.||.+. ||.. +. .+..++|+++. .+ +++++..++.|.+.++
T Consensus 479 ~Ll~~~GV~vv----PGs~Fg~~~g~~~~Rit~~--~~----~e~l~eal~RL~~~~~ 526 (534)
T PLN02231 479 RLLNATGIVVV----PGSGFGQVPGTWHFRCTIL--PQ----EDKIPAIVSRLTEFHK 526 (534)
T ss_pred HHHHhcCEEEe----CCcccCCCCCCCeEEEEeC--CC----HHHHHHHHHHHHHHHH
Confidence 46678899995 7765 32 23456999873 44 6888888888877665
No 143
>PRK10534 L-threonine aldolase; Provisional
Probab=99.91 E-value=3.8e-22 Score=201.86 Aligned_cols=320 Identities=16% Similarity=0.204 Sum_probs=201.6
Q ss_pred eeecCCCCC-CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHH
Q 010058 79 LELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQ 157 (519)
Q Consensus 79 i~L~a~en~-~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~ 157 (519)
|+|..++|+ +||.+++++....... ..|+......+++ +.+++++|.++ .+++.+|+.++..
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~--------~~Y~~~~~~~~L~----~~la~~~g~~~-----~~v~~~g~~a~~~ 64 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGD--------DVYGDDPTVNALQ----DYAAELSGKEA-----ALFLPTGTQANLV 64 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCC--------cccCCCHHHHHHH----HHHHHHhCCCe-----EEEeCchHHHHHH
Confidence 566667775 6889999987644331 2233345566677 77888999876 2666667668887
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CCcEEEEc
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-----RPKLIVAG 232 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~klIi~~ 232 (519)
++.+++.|||+|+++.+.|......+ +....+ ....++++.+ +++.+|++++++++.+. ++++|+++
T Consensus 65 ~l~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~ 136 (333)
T PRK10534 65 ALLSHCERGEEYIVGQAAHNYLYEAG------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred HHHHhcCCCCeeEEechhhhhHhcCC------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence 88888999999998765443211111 011112 1223334444 46889999999988653 58899998
Q ss_pred cccccccccHHHH---HHHHhhcCCEEEehhhhhhhcccc-CCCCCCC-CCCeEEEEcCCCcccCCCcceEEeecccccc
Q 010058 233 ASAYARLYDYARI---RKVCDKQKAVMLADMAHISGLVAA-GVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEI 307 (519)
Q Consensus 233 ~sn~g~~~d~~~i---~~ia~~~~~~livD~ah~~g~~~~-~~~~~p~-~~~di~~~S~~K~l~GprgG~i~~~~~~~~~ 307 (519)
.+++|...+.++| .++|++++++|++|+|+..+.... +.....+ .+.|.++.|++|.++.+.||++++++
T Consensus 137 np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~----- 211 (333)
T PRK10534 137 NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR----- 211 (333)
T ss_pred cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH-----
Confidence 5557988776554 567889999999999977542211 1110000 13466666889987766666788777
Q ss_pred cccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcc
Q 010058 308 NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENH 387 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 387 (519)
++.+.+.....+. .++.+...++ .++++..+. ...+..++..++++++.+.|.+.|+++..+ .++
T Consensus 212 ---------~~i~~~~~~~~~~-~~~~~~~~~~-~a~~~~~l~--~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~~n 276 (333)
T PRK10534 212 ---------DYIKRARRWRKMT-GGGMRQAGIL-AAAGLYALK--HNVARLQEDHDNAAWLAEQLREAGADVMRQ--DTN 276 (333)
T ss_pred ---------HHHHHHHHHHHHh-CCchhhHHHH-HHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhCCCccCCC--Cce
Confidence 5555554433221 1111211111 111222221 123445556677889999999999887654 356
Q ss_pred eeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 388 LVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 388 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++++.+.. .+..++.+.|.+.||.++ |+ ..+|++...-.+ +++++++++.|++.+.
T Consensus 277 fv~~~~~~--~~~~~~~~~l~~~gi~v~----~~-------~~~rl~~~~r~t----~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 277 MLFVRVGE--EQAAALGEYMRERNVLIN----AS-------PIVRLVTHLDVS----REQLAEVVAHWRAFLA 332 (333)
T ss_pred EEEEECCc--hhHHHHHHHHHHcCeeec----CC-------ceEEEEEEeCCC----HHHHHHHHHHHHHHhc
Confidence 77776642 245678889999999996 33 258887654444 8999999999987653
No 144
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.91 E-value=5.2e-22 Score=207.81 Aligned_cols=327 Identities=14% Similarity=0.120 Sum_probs=214.7
Q ss_pred CeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 78 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 78 ~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
.++|..+.+. ++|.+.+++.+..... ..|+...+..++++...+++.+..+ .+ .+|++|+|++ +
T Consensus 87 ~i~L~~g~p~~~~~p~~~~~~~~~~~~~--------~~Y~~~~g~~~lr~~ia~~~~~~~~--~~---~~Iiit~G~~~a 153 (431)
T PRK15481 87 LHDLAGGNPDPQRLPDLSRYFARLSRTP--------RLYGDAPVSPELHAWAARWLRDDCP--VA---FEIDLTSGAIDA 153 (431)
T ss_pred hhhhhcCCCChhHhHHHHHHHHHhhhhh--------hhcCCcCCCHHHHHHHHHHHhhccC--Cc---CeEEEecCcHHH
Confidence 3566555332 2355666666544321 1234444555677555555443222 22 2699999998 8
Q ss_pred HHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc--
Q 010058 155 NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-- 232 (519)
Q Consensus 155 ~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-- 232 (519)
+..++.++++|||.|++.++.|..+.. .+...|..+..++ ++++ .+|++++++++++ ++|+|+++
T Consensus 154 l~~~~~~l~~pgd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~~~--g~~~~~l~~~~~~-~~k~i~~~p~ 220 (431)
T PRK15481 154 IERLLCAHLLPGDSVAVEDPCFLSSIN--------MLRYAGFSASPVS--VDAE--GMQPEKLERALAQ-GARAVILTPR 220 (431)
T ss_pred HHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCCeEEeec--cCCC--CCCHHHHHHHHhc-CCCEEEECCC
Confidence 888999999999999999977766643 2334465555555 4432 4899999999876 89988876
Q ss_pred ccc-ccccccHH---HHHHHHhhc-CCEEEehhhhhhhccccCCCCCCCC---CCeEEEEcCCCcc-cCCCcceEEeecc
Q 010058 233 ASA-YARLYDYA---RIRKVCDKQ-KAVMLADMAHISGLVAAGVIPSPFE---YADVVTTTTHKSL-RGPRGAMIFFRKG 303 (519)
Q Consensus 233 ~sn-~g~~~d~~---~i~~ia~~~-~~~livD~ah~~g~~~~~~~~~p~~---~~di~~~S~~K~l-~GprgG~i~~~~~ 303 (519)
++| +|..++.+ +|.++|+++ +++||+|+++.. +...+. ..++. ...+++.|++|++ +|+|.||+++++
T Consensus 221 p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~-~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~- 297 (431)
T PRK15481 221 AHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFAL-LSSSPY-HSVIPQTTQRWALIRSVSKALGPDLRLAFVASDS- 297 (431)
T ss_pred CCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhh-hccCCC-CCCCcCCCCCEEEEeeeccccCCCceeEEEeCCH-
Confidence 566 88888865 888999999 999999998542 221111 11121 2347888999987 577779999987
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc-CHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK-TPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
++.+.+........ .+.+.....+++.+++.-. ....++.+++++++++.+.+.|++.|+.+..+
T Consensus 298 -------------~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p 363 (431)
T PRK15481 298 -------------ATSARLRLRLNSGT-QWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSP 363 (431)
T ss_pred -------------HHHHHHHHHHhccc-cCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC
Confidence 45555543222211 2234444455555555321 11246778889999999999999988765443
Q ss_pred CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CC-CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 383 GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SA-MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 383 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~-~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..+.++|+++.. +..++.+.|.+.||.+. ||.. +. ...+++||++...+ ++++++.++.|.+++.
T Consensus 364 -~gg~f~~~~l~~---~~~~~~~~l~~~gV~v~----pg~~f~~~~~~~~iRis~~~~~-----~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 364 -GDGLNLWLPLDT---DSQATALTLAKSGWLVR----EGEAFGVSAPSHGLRITLSTLN-----DAEINRLAADLHQALN 430 (431)
T ss_pred -CCeEEEEEECCC---CHHHHHHHHHHCCcEEe----cCCccccCCCCCeEEEEcCCCC-----hHHHHHHHHHHHHHhc
Confidence 345677777643 35677788888999997 5543 11 12457999987643 5899999999988764
No 145
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.3e-21 Score=200.79 Aligned_cols=318 Identities=16% Similarity=0.167 Sum_probs=213.4
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.|+|..++|+ +++.+.+++.+...... .|+ ...+ ..++ +.+++++|++++ +|++|+|++
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~~~--~Y~------~~~g-~~lr----~~ia~~~~~~~~----~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAELLR--LYP------DPQG-RALR----EAIAARTGVPAD----RIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHHhh--cCC------CCcH-HHHH----HHHHHHhCcCHH----HEEEcCCHHH
Confidence 45889888875 67888888876543311 333 3233 2455 677778898764 699999998
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
++..++.++++|||.|++.+++++.+.. .+...|..+..++ .+ +++.+|++++++.+++ ++++|+++
T Consensus 100 ~l~~~~~~~~~~gd~vli~~P~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~~~~-~~~~v~l~~ 167 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLYPSFPLHED--------YPTMMGARVERVT--VT-PDLGFDLDALCAAVAR-APRMLMFSN 167 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCeEEEee--cC-CCCCCCHHHHHHhhhc-CCCEEEEeC
Confidence 7776888889999999998877655432 1223455555554 44 3478999999998876 88998887
Q ss_pred ccc-ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCCC---C---CCeEEEEcCCCcc--cCCCcceEEee
Q 010058 233 ASA-YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSPF---E---YADVVTTTTHKSL--RGPRGAMIFFR 301 (519)
Q Consensus 233 ~sn-~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p~---~---~~di~~~S~~K~l--~GprgG~i~~~ 301 (519)
++| +|..++.+++.++++. .++++|+|+++.. +...+..++.+ . ...+++.|++|.+ +|.|.||+++.
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 168 PSNPVGSWLTADQLARVLDATPPETLIVVDEAYAE-YAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHH-hcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 777 8999988777777653 3789999999642 22221111111 1 1247888999975 78899998875
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
++ ++.+.+.....+ .+.+.....++..++.. ...+++..+.++++++.+.+.|++.|+.+..
T Consensus 247 ~~-------------~l~~~~~~~~~~---~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p 308 (371)
T PRK05166 247 DP-------------ELVGLLDRVRTP---FNVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAP 308 (371)
T ss_pred CH-------------HHHHHHHHhccC---CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCC
Confidence 43 555554433221 12333333333334432 2345777888899999999999998887543
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+ .+.++|+++. .+..++.+.|.++||.+. |+.. ....++|||++.. .++++++.+.|++++
T Consensus 309 ~--~g~fl~~~~~---~~~~~l~~~l~~~gi~v~----p~~~-~~~~~~iRi~~~~-------~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 309 S--RANFLFFDAR---RPASAVAEALLRQGVIVK----PWKQ-PGFETFIRVSIGS-------PEENDHFVAALDKVL 369 (371)
T ss_pred C--cCCEEEEeCC---CCHHHHHHHHHHCCeEEe----cCCC-CCCCCeEEEEcCC-------HHHHHHHHHHHHHHh
Confidence 2 3456677653 246778888888899996 5543 2236789999763 678999999998764
No 146
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.90 E-value=1.1e-22 Score=207.78 Aligned_cols=316 Identities=18% Similarity=0.190 Sum_probs=205.8
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-cCCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL-LKPH 166 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~-~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al-l~pG 166 (519)
..+.++++.+++.+.+ ++. ...+.++| +.++++||..+ .+.++||++|+.+++.++ ++||
T Consensus 4 ~~e~~~~v~~~l~s~~---------~~~~g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~g 65 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGW---------LSTYGPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPG 65 (363)
T ss_dssp HHHHHHHHHHHHHHTC---------CSSSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTT
T ss_pred CHHHHHHHHHHHHhCC---------ccCCCHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcC
Confidence 3566778888887732 122 47788888 88899999886 399999999999999998 8999
Q ss_pred CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHH
Q 010058 167 ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIR 246 (519)
Q Consensus 167 D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~ 246 (519)
|+|+++.+++.+...+.. ..|.. .+.+++|++++.+|++.+++++++ ++|+|++. +.+|...|+++|.
T Consensus 66 deVi~p~~t~~~~~~ai~--------~~G~~--pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~ 133 (363)
T PF01041_consen 66 DEVIVPAYTFPATASAIL--------WAGAE--PVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIR 133 (363)
T ss_dssp SEEEEESSS-THHHHHHH--------HTT-E--EEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHH
T ss_pred ceEecCCCcchHHHHHHH--------HhccE--EEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHH
Confidence 999999988877765333 33443 455578888999999999999998 89998774 4478888999999
Q ss_pred HHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC--CcccCCCcceEEeecccccccccCcchhhhHHHHhhh
Q 010058 247 KVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ 324 (519)
Q Consensus 247 ~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~--K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~ 324 (519)
++|+++|++||.|+||+.|....+..... ..|+.++|+| |.+.+..||+|+++++ ++.+++..
T Consensus 134 ~~~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~-------------~~~~~~~~ 198 (363)
T PF01041_consen 134 AIARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDP-------------ELAERARA 198 (363)
T ss_dssp HHHHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTH-------------HHHHHHHH
T ss_pred HHHHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHH-------------HHHHHhhh
Confidence 99999999999999999998776644332 3577777765 8898889999999985 33333322
Q ss_pred cccCCC-------------C-CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecC--CCC--
Q 010058 325 AVFPGL-------------Q-GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSG--GTE-- 385 (519)
Q Consensus 325 ~~~~~~-------------~-g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~-- 385 (519)
....+. . ....+..+.| +.++.++ ..+++..++.+++++.+.+.|.+. ++..... +..
T Consensus 199 ~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~A-Aigl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~ 275 (363)
T PF01041_consen 199 LRNHGRSRDAFRRYRHELPPGYNFRMSELQA-AIGLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERS 275 (363)
T ss_dssp HTBTTEETSECSTTEESSSS--B-B-BHHHH-HHHHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEB
T ss_pred hhccCcCccccccccccccCCcccccHHHHH-HHHHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 111110 0 0111222222 2233443 347888999999999999999998 5545442 111
Q ss_pred -cceeeeeccCC-CCcHHHHHHhhcccCeEEcccc-cCCCCCCC-C-----------------CCeEEeccCccccCCCC
Q 010058 386 -NHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNT-VPGDVSAM-V-----------------PGGIRMGTPALTSRGFV 444 (519)
Q Consensus 386 -~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~-~p~~~~~~-~-----------------~~~iRi~~~~~ttrg~~ 444 (519)
.+.+.+.+... ..+.+++.+.|.+.||.++..+ .|.+..+. . ...|.+-++. .++
T Consensus 276 ~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~----~lt 351 (363)
T PF01041_consen 276 SYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHP----RLT 351 (363)
T ss_dssp CESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHST----TSC
T ss_pred ccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCC----CCC
Confidence 12223333221 1357889999999999998654 23221110 0 1123333333 455
Q ss_pred HHHHHHHHHHHH
Q 010058 445 EEDFEKVAEFFD 456 (519)
Q Consensus 445 ~~di~~l~~~l~ 456 (519)
++|++++++.|+
T Consensus 352 ~edv~~I~~~ir 363 (363)
T PF01041_consen 352 EEDVDYIAEAIR 363 (363)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHhhccC
Confidence 899999999874
No 147
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.90 E-value=4.5e-21 Score=198.80 Aligned_cols=332 Identities=14% Similarity=0.137 Sum_probs=211.2
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCcH
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ--LDPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g--~~~~~~~~~V~~~sGs 152 (519)
+.++|..+++. +++.+.+++.+...... + |+...+..++++.+.+++. ..| +++ .+|.+|+|+
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--~------Y~~~~g~~~lr~~ia~~~~-~~~~~~~~----~~i~~t~G~ 97 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEVL--A------YSHSQGIPELREAFAKYYK-KWGIDVEP----DEILITNGG 97 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCCc--C------cCCCCCCHHHHHHHHHHHH-HhCCCCCc----ceEEEcCCh
Confidence 45788777764 57888888876543211 2 3333555677766656654 234 344 369999999
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCC-CCHHHHHHHhhhhCCcEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGY-IDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~-iD~d~l~~~i~~~k~klIi 230 (519)
+ ++..++.++++|||+|+++++.+..+.. .....|..+..++.+.+ +++. .|++++++++++ ++++|+
T Consensus 98 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~-~g~~~~~~~~l~~~~~~-~~~~v~ 167 (397)
T PRK07568 98 SEAILFAMMAICDPGDEILVPEPFYANYNG--------FATSAGVKIVPVTTKIE-EGFHLPSKEEIEKLITP-KTKAIL 167 (397)
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCccHHH--------HHHHcCCEEEEeecCcc-cCCCCCCHHHHHHhcCc-cceEEE
Confidence 8 7777888889999999999866554432 11233554545543211 2333 468999998876 889988
Q ss_pred Ec-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCC--CC---CCeEEEEcCCCcc--cCCCcce
Q 010058 231 AG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSP--FE---YADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 231 ~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p--~~---~~di~~~S~~K~l--~GprgG~ 297 (519)
++ ++| +|...+ +++|.++|+++|+++|+|+++. ++...+. .++. +. ...+++.|++|.+ +|.|.|+
T Consensus 168 i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 246 (397)
T PRK07568 168 ISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYR-EFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGC 246 (397)
T ss_pred EECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccch-hcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEE
Confidence 77 766 787664 7888999999999999999864 3332221 1111 11 2347888999986 5888899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G 376 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 376 (519)
++++++ ++.+.+...... ..+. +.....+++.+++.. +..+++..+.+.++++.+.+.|++. |
T Consensus 247 ~~~~~~-------------~~~~~~~~~~~~-~~~~-s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 310 (397)
T PRK07568 247 LISKNK-------------ELIAAAMKLCQA-RLSP-PTLEQIGAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPG 310 (397)
T ss_pred EecCCH-------------HHHHHHHHHhhc-cCCC-CcHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 998642 344433222111 1122 333334445555432 2345777888999999999999887 6
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhhcc------cCeEEcccccCCCC----CCCCCCeEEeccCccccCCCCHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLES------VHIAANKNTVPGDV----SAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~------~gI~v~~~~~p~~~----~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
+.+..+ ..+.++|+.+.. .+..++.+.|.+ .||.+. ||.. ....++++||++. .+ ++
T Consensus 311 ~~~~~p-~g~~~~~~~l~~--~~~~~~~~~l~~~~~~~~~gv~v~----pg~~f~~~~~~~~~~iRls~~--~~----~~ 377 (397)
T PRK07568 311 VVCEKP-KGAFYIIAKLPV--DDAEDFAKWLLTDFNYNGETVMVA----PASGFYATPGLGKNEIRIAYV--LN----EE 377 (397)
T ss_pred ceecCC-CcceEEEEecCC--CCHHHHHHHHHhhcccccceEEEe----CchHhcCCCCCCCCeEEEEEe--CC----HH
Confidence 655433 334556776643 245666666532 689986 5543 1123468999975 23 68
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVKL 461 (519)
Q Consensus 447 di~~l~~~l~~~l~~ 461 (519)
++++.++.|.++++.
T Consensus 378 ~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 378 DLKRAMEILKEALEK 392 (397)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999888764
No 148
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=2.6e-22 Score=204.26 Aligned_cols=310 Identities=15% Similarity=0.140 Sum_probs=201.3
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANF 156 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~ 156 (519)
.+.|..+||+.++... +... . ...||.. .. ..+ ++++++++|++++ +|.+++|++ ++.
T Consensus 30 ~~~l~~Nenp~~~~~~--~~~~--~--~~~Yp~~------~~-~~l----~~~~a~~~g~~~~----~I~~~~Gs~e~i~ 88 (351)
T PRK01688 30 DVWLNANEYPTAVEFQ--LTQQ--T--LNRYPEC------QP-KAV----IENYAAYAGVKPE----QVLVSRGADEGIE 88 (351)
T ss_pred ceEecCCCCCCCCChh--hccc--c--cccCCCC------Ch-HHH----HHHHHHHhCCCHH----HEEEcCCHHHHHH
Confidence 4899999998543321 1111 1 1124433 21 233 4788899999884 699999998 888
Q ss_pred HHHHhhcCCC-CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 157 QVYTALLKPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 157 ~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
.++.++++|| |+|++++++|+.+.. .+...|..+..+++ + +++.+|++++++++ + ++++|+++ |+
T Consensus 89 ~~~~~~~~~g~~~vli~~P~y~~y~~--------~~~~~G~~~~~v~~--~-~~~~~d~~~l~~~~-~-~~~lv~l~nPn 155 (351)
T PRK01688 89 LLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGVEIRTVPT--L-DNWQLDLPAIADNL-D-GVKVVYVCSPN 155 (351)
T ss_pred HHHHHhcCCCCCEEEEcCCCHHHHHH--------HHHHcCCEEEEeec--C-CCCCCCHHHHHHhc-c-CCcEEEEeCCC
Confidence 7888999997 999998866654322 23345666656554 4 34789999999887 4 79999888 77
Q ss_pred c-ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeecccccc
Q 010058 235 A-YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 307 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~~~~~~ 307 (519)
| +|...+.+++.++++.. +++||+|+++.. +.........+. .--+++.|++|++ +|.|.||+++++
T Consensus 156 NPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~-f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~----- 229 (351)
T PRK01688 156 NPTGNLINPQDLRTLLELTRGKAIVVADEAYIE-FCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE----- 229 (351)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEECchhh-cCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH-----
Confidence 7 89999877777776532 689999999642 211100000000 1347788999975 588889999987
Q ss_pred cccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCc
Q 010058 308 NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTEN 386 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 386 (519)
++.+.+.+...+. +.+.....+...++.......+++.++++.++++++.+.|.++ |+..+.+ +.+
T Consensus 230 ---------~~i~~l~~~~~~~---~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-s~~ 296 (351)
T PRK01688 230 ---------EVINLLLKVIAPY---PLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFD-SET 296 (351)
T ss_pred ---------HHHHHHHhccCCC---CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECC-CCC
Confidence 5666665543332 2222222222234432111234667788888999999999988 6643333 345
Q ss_pred ceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 387 HLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 387 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
+++++.+. +..++.+.|.++||.++.. ...+..++++||++. + ++|+++++++|
T Consensus 297 nfi~~~~~----~~~~l~~~L~~~gi~vr~~----~~~~~~~~~iRis~~---~----~~e~~~l~~al 350 (351)
T PRK01688 297 NYILARFT----ASSAVFKSLWDQGIILRDQ----NKQPGLSNCLRITIG---T----REECQRVIDAL 350 (351)
T ss_pred cEEEEEcC----CHHHHHHHHHHCCeEEEEC----CCcCCCCCeEEEeCC---C----HHHHHHHHHhh
Confidence 56777653 4677888888999999742 211123578999976 3 69999999887
No 149
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.90 E-value=2.1e-21 Score=198.88 Aligned_cols=338 Identities=14% Similarity=0.073 Sum_probs=214.8
Q ss_pred hhhhhhcCHHHHHHHHHHH-HhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEK-ARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 130 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~-~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~ 130 (519)
++++...++.++..+.... ....+.++|..+++. .++.+++++.+.... . + |+...+..++++.+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~--~------Y~~~~G~~~lr~~ia~~ 74 (364)
T PRK07865 4 SARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA-P--G------YPTTAGTPELREAIVGW 74 (364)
T ss_pred cccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh-C--C------CCCccCCHHHHHHHHHH
Confidence 4556666776666665443 233456888776542 367788888765432 1 2 33335566788888888
Q ss_pred HHHHcCCC-CCCCcceEEeCCcHH-HHHHHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC
Q 010058 131 ALDAFQLD-PAKWGVNVQSLSGSP-ANFQVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE 207 (519)
Q Consensus 131 ~~~~~g~~-~~~~~~~V~~~sGs~-a~~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~ 207 (519)
+.+.+|.+ .+. .+|++|+|++ ++..++..+ ++|||.|+++++.|.++... +...|..+..+ +
T Consensus 75 l~~~~~~~~~~~--~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~----~- 139 (364)
T PRK07865 75 LARRRGVTGLDP--AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVG--------ARLAGATVVRA----D- 139 (364)
T ss_pred HHHHcCCCCCCc--ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHH--------HHhcCCEEEec----C-
Confidence 88877754 222 3699999998 776566777 79999999999777665432 22334433222 1
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC------
Q 010058 208 STGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF------ 276 (519)
Q Consensus 208 ~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~------ 276 (519)
+++++.. .++++|+++ ++| +|..++ +++|.++|+++|+++|+|+++.. +...+.....+
T Consensus 140 -----~~~~l~~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~ 209 (364)
T PRK07865 140 -----SLTELGP----QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLE-LGWDAEPVSILDPRVCG 209 (364)
T ss_pred -----ChhhCCc----ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhh-hccCCCCCccccccccC
Confidence 2233322 378999987 666 787766 56777888999999999999753 22211111111
Q ss_pred -C-CCeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH
Q 010058 277 -E-YADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP 352 (519)
Q Consensus 277 -~-~~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~ 352 (519)
. ...+++.|++|.+ +|.|.||+++++ ++.+.+......... ..+.....++..++.. ..
T Consensus 210 ~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~--------------~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~--~~ 272 (364)
T PRK07865 210 GDHTGLLAVHSLSKQSNLAGYRAGFVAGDP--------------ALVAELLEVRKHAGM-MVPAPVQAAMVAALGD--DA 272 (364)
T ss_pred CccceEEEEeechhccCCCceeeEEEecCH--------------HHHHHHHHHHHhcCC-CcCHHHHHHHHHHhCC--HH
Confidence 0 2348889999975 688999999887 455544332211111 2233333333334432 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeE
Q 010058 353 EYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGI 431 (519)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~i 431 (519)
..++.++.+.++++.+.+.|++.|+.+..+ ..+.++|+.+. .+..++.+.|.+.||.+. ||.. ++..++++
T Consensus 273 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~---~~~~~~~~~l~~~gv~v~----pg~~f~~~~~~~i 344 (364)
T PRK07865 273 HVREQRERYARRRAVLRPALEAAGFRVDHS-EAGLYLWATRG---EDCWDTVAWLAERGILVA----PGDFYGPAGAQHV 344 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CccEEEEEeCC---CCHHHHHHHHHHCCEEEe----CccccCcCCCCEE
Confidence 346777888999999999999988776543 23445566542 245667788888999996 5543 23346789
Q ss_pred EeccCccccCCCCHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
||++.. + ++++++.++.|.
T Consensus 345 Ri~~~~--~----~~~~~~~~~~l~ 363 (364)
T PRK07865 345 RVALTA--T----DERIAAAVERLA 363 (364)
T ss_pred EEEecC--C----HHHHHHHHHHhh
Confidence 999763 3 688998888774
No 150
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=2.5e-21 Score=201.05 Aligned_cols=328 Identities=18% Similarity=0.190 Sum_probs=216.9
Q ss_pred cCCCCCC----cHHHHHHHhhHhhhccCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHH
Q 010058 82 IPSENFT----SVSVMQAVGSVMTNKYSEGYPGARYY-GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 82 ~a~en~~----~~~V~ea~~~~l~~~~~~g~p~~~~y-~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~ 156 (519)
..+.+++ .|+|++++.+.+.. +..+..+.+.. +..+...++| +++++++|.+. .+.++||++||.
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG~~An~ 119 (406)
T PRK13393 50 WCSNDYLGMGQHPAVLAAMHEALDT-CGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSGYVSNW 119 (406)
T ss_pred eecccccCCCCCHHHHHHHHHHHHH-cCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHH
Confidence 3455553 78999999998865 53333334332 2233345555 88889999754 499999999999
Q ss_pred HHHHhhcC--CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh---hCCcEEEE
Q 010058 157 QVYTALLK--PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL---FRPKLIVA 231 (519)
Q Consensus 157 ~~~~all~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~---~k~klIi~ 231 (519)
+++.++.. +||.|+.....|++.+.... ..|.....++ ..|++++++.+.. .++++|++
T Consensus 120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~--------~~g~~~~~~~--------~~d~~~l~~~l~~~~~~~~~~v~~ 183 (406)
T PRK13393 120 AALSTLGSRLPGCVILSDELNHASMIEGIR--------HSRAEKRIFR--------HNDPADLERKLSDLDPHRPKLVAF 183 (406)
T ss_pred HHHHHhhcCCCCCEEEEccchhHHHHHHHH--------HcCCeEEEeC--------CCCHHHHHHHHHhccCCCCEEEEE
Confidence 88887765 88888877777776654322 2233222222 1367777776653 25778887
Q ss_pred c-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccc-cC--CCC-CCC-CCCeEEEEcCCCcccCCCcceEEeeccc
Q 010058 232 G-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVA-AG--VIP-SPF-EYADVVTTTTHKSLRGPRGAMIFFRKGV 304 (519)
Q Consensus 232 ~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~-~~--~~~-~p~-~~~di~~~S~~K~l~GprgG~i~~~~~~ 304 (519)
+ ..+ +|...|+++|.++|+++|+++++|++|..|+.. .+ ... .++ +..|+++.|++|.+++ .||++++++
T Consensus 184 ~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~GG~~~~~~-- 260 (406)
T PRK13393 184 ESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MGGYITGSA-- 260 (406)
T ss_pred cCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cCceeeCCH--
Confidence 7 444 789999999999999999999999999877642 11 111 011 2368888999999864 469998876
Q ss_pred ccccccCcchhhhHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGG 383 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 383 (519)
++.+.+.....+.. .++.+....++..++++.+.... ..+++..++++++.+.|++.|++++.+
T Consensus 261 ------------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~~~- 325 (406)
T PRK13393 261 ------------ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAGIPHLPN- 325 (406)
T ss_pred ------------HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcCCCcCCC-
Confidence 44444433222221 23445555666667787654432 234667888999999999888876643
Q ss_pred CCcceeeeeccCCCCcHHHHHHhhcc-cCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVLES-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
...++.+.+.. ..+..++.+.|.+ +||.++....|.. +.+.+.|||+++..++ ++|++++++.|.+++..
T Consensus 326 -~~~i~~v~~~~-~~~~~~l~~~L~~~~Gi~v~~~~~p~~--p~g~~~iRis~~~~~t----~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 326 -PSHIVPVMVGD-PVLCKQISDELLDRYGIYVQPINYPTV--PRGTERLRITPSPLHT----DADIEHLVQALSEIWAR 396 (406)
T ss_pred -CCCeEEEEeCC-HHHHHHHHHHHHHhCCEEEEeECCCCC--CCCCceEEEEECCCCC----HHHHHHHHHHHHHHHHh
Confidence 23344343321 1234567777765 6999975333321 2334689999999999 99999999999998864
No 151
>PRK03321 putative aminotransferase; Provisional
Probab=99.90 E-value=8.6e-22 Score=200.78 Aligned_cols=314 Identities=15% Similarity=0.137 Sum_probs=212.9
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.|+|..+++. +++.+.+++.+.+.. . ..||. .+.+.++ +.+++++|++++ +|++++|++
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~-------~g~~~lr----~~ia~~~~~~~~----~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD-------MGAVELR----AALAEHLGVPPE----HVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC-------CcHHHHH----HHHHHHhCcCHH----HEEECCCHHH
Confidence 45888877774 567899999887653 2 13331 2345555 777788888764 599999998
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
++..++.++++|||+|+++.+.+..+.. .+...|..+..++ .++ ++.+|++++++.+++ ++++|+++
T Consensus 86 ~l~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~~~~~v~--~~~-~~~~~~~~l~~~~~~-~~~~v~l~~ 153 (352)
T PRK03321 86 LCQQLVQATAGPGDEVIFAWRSFEAYPI--------LVQVAGATPVQVP--LTP-DHTHDLDAMAAAITD-RTRLIFVCN 153 (352)
T ss_pred HHHHHHHHhcCCCCEEEeCCCCHHHHHH--------HHHHcCCEEEEcc--CCC-CCCCCHHHHHHhhcc-CCCEEEEeC
Confidence 6666778889999999998765443311 1223354444444 442 377899999999876 89998887
Q ss_pred ccc-ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCCCC-----CCeEEEEcCCCcc--cCCCcceEEeec
Q 010058 233 ASA-YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSL--RGPRGAMIFFRK 302 (519)
Q Consensus 233 ~sn-~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p~~-----~~di~~~S~~K~l--~GprgG~i~~~~ 302 (519)
++| +|...+.+++.++|+. +++++|+|+++.. +...+..+.++. .--+++.|++|.+ +|.|.||+++++
T Consensus 154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVE-YVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHH-hccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 666 8999999999999987 5999999999653 222221111111 1246778999986 578889999987
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
++.+.+.....+ .+.+.....+..+++.. ...+.+..+++.++++.+.+.|.+.|+.+..
T Consensus 233 --------------~~~~~~~~~~~~---~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~- 292 (352)
T PRK03321 233 --------------EVIAALRKVAVP---FSVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVPP- 292 (352)
T ss_pred --------------HHHHHHHHhcCC---CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC-
Confidence 566655543222 23344444433444432 2345556666777788899999988876533
Q ss_pred CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 383 GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 383 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
....++|+.+. .+..++.+.|.++||.+. |. ...+|||++. + .+++++++++|++++.
T Consensus 293 -~~g~~i~i~l~---~~~~~~~~~l~~~gI~v~----~~-----~~~~iRi~~~---~----~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 293 -SQANFVWLPLG---ERTADFAAAAAEAGVVVR----PF-----AGEGVRVTIG---A----PEENDAFLRAARAWRA 350 (352)
T ss_pred -CCCCEEEEeCC---CCHHHHHHHHHHCCEEEE----cc-----CCCcEEEeeC---C----HHHHHHHHHHHHHHhc
Confidence 23456677653 246778888988999996 32 2346999963 4 7999999999988753
No 152
>PLN03032 serine decarboxylase; Provisional
Probab=99.90 E-value=4.3e-21 Score=194.15 Aligned_cols=316 Identities=14% Similarity=0.061 Sum_probs=219.4
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhc--C
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALL--K 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all--~ 164 (519)
....+++++...+.+.+ |+|...+.. .....++|+.+++++++++|++++++ .-.+|||++ +|+.++.+.. .
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~-g~~a~~~e~~v~~~ia~llg~~~~~~--~G~fTsGGTEaNl~al~~ar~~~ 109 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNY-GVHSRQFEVGVLDWFARLWELEKDEY--WGYITTCGTEGNLHGILVGREVF 109 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCC-CccHHHHHHHHHHHHHHHhCCCCccC--CEEEeCchHHHHHHHHHHHHHhC
Confidence 35567888888887756 888774322 24567899999999999999987541 136677766 8887666542 3
Q ss_pred CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEc-ccc-ccccc
Q 010058 165 PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAG-ASA-YARLY 240 (519)
Q Consensus 165 pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~-~sn-~g~~~ 240 (519)
+++.|+++..+|.+.... +.+.|.....+| ++ +++.+|+++|++++.+. +|.+|+++ .++ +|.+.
T Consensus 110 ~~~~vi~s~~~H~Sv~ka--------a~~lg~~~~~V~--~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id 178 (374)
T PLN03032 110 PDGILYASRESHYSVFKA--------ARMYRMEAVKVP--TL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD 178 (374)
T ss_pred CCcEEEeCCCceeHHHHH--------HHHcCCCCeEee--eC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC
Confidence 567888888888777643 223344445555 44 46899999999999763 47777776 444 89999
Q ss_pred cHHHHHHHHhhcC-----CEEEehhhhhhhccccCCCCCC--C-CCCeEEEEcCCCcccCCCc-ceEEeecccccccccC
Q 010058 241 DYARIRKVCDKQK-----AVMLADMAHISGLVAAGVIPSP--F-EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQG 311 (519)
Q Consensus 241 d~~~i~~ia~~~~-----~~livD~ah~~g~~~~~~~~~p--~-~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g 311 (519)
|+++|+++|+++| +++++|+|+..+.++......+ + ..+|.+++|+||++..|.| |+++++++.
T Consensus 179 pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~------- 251 (374)
T PLN03032 179 DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKH------- 251 (374)
T ss_pred CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchh-------
Confidence 9999999999996 5899999988776653211111 1 2589999999998777999 999998742
Q ss_pred cchhhhHHHHhhh--c----ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCC
Q 010058 312 QEVMYAYEDKINQ--A----VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTE 385 (519)
Q Consensus 312 ~~~~~~~~~~i~~--~----~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 385 (519)
.+.+.. . ......|+.+....+++..+++.....+|.+..++..++++++.+.|++.|+.++..+.
T Consensus 252 -------~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~- 323 (374)
T PLN03032 252 -------VKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNEL- 323 (374)
T ss_pred -------hHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCC-
Confidence 111110 0 11233466666677788889999888999999999999999999999999988766432
Q ss_pred cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 386 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 386 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
..++.+..+. ... +. .|..++. .+..+|+.+....+ .+.++++++-|.+
T Consensus 324 --~~~V~f~~~~--~~~----~~-~~w~l~~----------~~~~~hi~vm~~~~----~~~id~fi~dl~~ 372 (374)
T PLN03032 324 --SSTVVFERPM--DEA----FI-KKWQLAC----------EGDIAHVVVMPNVT----VEKLDEFVEELVE 372 (374)
T ss_pred --ceEEEEcCCC--cHh----Hh-heeeecc----------cCCEEEEEECCCCC----HHHHHHHHHHHhc
Confidence 2334444321 111 21 3555531 12478988766555 6777777766653
No 153
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.90 E-value=1.3e-21 Score=200.52 Aligned_cols=312 Identities=17% Similarity=0.162 Sum_probs=203.6
Q ss_pred cHHHHHHHhhHhhhccC-------CCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHH
Q 010058 89 SVSVMQAVGSVMTNKYS-------EGYPGARYYGG-NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYT 160 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~-------~g~p~~~~y~~-~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~ 160 (519)
+|.+.+++.+.+.. |. .|..++|...+ .+..+++| +.+++++|++. .+.++||+.+|..++.
T Consensus 20 ~~~~~~~~~~~~~~-~~~~~p~~~~~~~gs~~~~g~~~~~~~~e----~~la~~~~~~~-----~l~~~sG~~a~~~~~~ 89 (370)
T PRK05937 20 SDTLVHEVEKRYRL-YCRQFPHAQLGYGGSRAILGPSSLLDDLE----HKIAHFHGAPE-----AFIVPSGYMANLGLCA 89 (370)
T ss_pred CHHHHHHHHHHHHH-hccccCCCCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCe-----EEEECChHHHHHHHHH
Confidence 56666666666554 31 23444443333 22344444 99999999964 3999999999987766
Q ss_pred hhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CCcEEEEc-cc
Q 010058 161 ALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-----RPKLIVAG-AS 234 (519)
Q Consensus 161 all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~klIi~~-~s 234 (519)
.+.++||.|+.....|++.+...... .+. .+.+ ...|++++++.+++. ++++|+++ .+
T Consensus 90 ~~~~~~d~ii~d~~~H~sv~~~~~~~-------~~~---~~~~------~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~ 153 (370)
T PRK05937 90 HLSSVTDYVLWDEQVHISVVYSLSVI-------SGW---HQSF------RHNDLDHLESLLESCRQRSFGRIFIFVCSVY 153 (370)
T ss_pred HhCCCCCEEEEEhhhhHHHHHHHHHc-------CCc---eEEe------cCCCHHHHHHHHHhhhccCCCcEEEEEecCC
Confidence 77788999998888887776543311 111 1222 246899999988742 34465555 44
Q ss_pred c-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC----CCCCCCCeEEEEcCCCcccCCCcceEEeecccccccc
Q 010058 235 A-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI----PSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK 309 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~----~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~ 309 (519)
| +|...|+++|.++|+++|+++++|++|..|.+..... ...+.+.++++.|++|.+ |+.|+.+++.+
T Consensus 154 s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~~------- 225 (370)
T PRK05937 154 SFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSSS------- 225 (370)
T ss_pred CCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcCH-------
Confidence 4 7999999999999999999999999999886654321 111223346677888976 66775566655
Q ss_pred cCcchhhhHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcce
Q 010058 310 QGQEVMYAYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHL 388 (519)
Q Consensus 310 ~g~~~~~~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 388 (519)
+....+.....|.. .++.+...++++.++++.+...+ +..++++.++++++.+.|...+. +. .
T Consensus 226 -------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~~-----~~---~ 289 (370)
T PRK05937 226 -------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAAP-----GC---V 289 (370)
T ss_pred -------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCCC-----CC---E
Confidence 22222221111222 23456667888888888775443 45667788888888877754321 11 1
Q ss_pred eeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 389 VLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 389 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
..+.+. +.+...+.+.|.+.||.++....| ..+.||++++.++| ++|++++++.|.++++..
T Consensus 290 ~~i~~~--~~~~~~~~~~L~~~gi~v~~~~~~------~~~~iRis~~~~~t----~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 290 QPIFLP--GISEQELYSKLVETGIRVGVVCFP------TGPFLRVNLHAFNT----EDEVDILVSVLATYLEKY 351 (370)
T ss_pred EEEEeC--ChhHHHHHHHHHHCCeeEEeeCCC------CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHHh
Confidence 112222 335667888998899988632222 23579999999999 999999999999988653
No 154
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.90 E-value=2.4e-21 Score=198.91 Aligned_cols=325 Identities=16% Similarity=0.176 Sum_probs=221.5
Q ss_pred ecCCCCCC----cHHHHHHHhhHhhhccCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHH
Q 010058 81 LIPSENFT----SVSVMQAVGSVMTNKYSEGYPGARYYGGN-EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPAN 155 (519)
Q Consensus 81 L~a~en~~----~~~V~ea~~~~l~~~~~~g~p~~~~y~~~-~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~ 155 (519)
..+|.+++ .|.++++..+.+.. |.-|..++|...|. ....++| +.+++++|.+. .++++||..||
T Consensus 106 ~FsSndYLGL~~~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~-----all~sSGy~AN 175 (476)
T PLN02955 106 LFSGNDYLGLSSHPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLE----SSLADLKKKED-----CLVCPTGFAAN 175 (476)
T ss_pred EeeccCccCCCCCHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHH----HHHHHHHCCCc-----EEEECChHHHH
Confidence 34677775 78999999988765 76666777665554 5566677 88999999886 49999999999
Q ss_pred HHHHHhhc--------------CCCCEEEEecCCCcccccccccccCCceeeeee--eeEEEeeeeCCCCCCCCHHHHHH
Q 010058 156 FQVYTALL--------------KPHERIMALDLPHGGHLSHGYQTDTKKISAVSI--FFETMPYRLDESTGYIDYEQLEK 219 (519)
Q Consensus 156 ~~~~~all--------------~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~v~~~~d~~~~~iD~d~l~~ 219 (519)
++++.+|. +++|.|+.....|.+... ++.++.. ....+.|+ .-|+++|++
T Consensus 176 ~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d--------G~~ls~~~~~a~~~~f~------HND~~~Le~ 241 (476)
T PLN02955 176 MAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID--------GVRLAERQGNVEVFVYR------HCDMYHLNS 241 (476)
T ss_pred HHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH--------HHHhccccCCceEEEeC------CCCHHHHHH
Confidence 99998873 466777777766666543 2222210 11222233 348899998
Q ss_pred Hhhhh--CCcEEEEc--cccccccccHHHHHHHHhhcCCEEEehhhhhhhcccc---CCCC-CCC-CCCeEEEEcCCCcc
Q 010058 220 SAALF--RPKLIVAG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAA---GVIP-SPF-EYADVVTTTTHKSL 290 (519)
Q Consensus 220 ~i~~~--k~klIi~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~---~~~~-~p~-~~~di~~~S~~K~l 290 (519)
+++.. +.++|++. .++.|...|+++|.++|++||++||+|+||..|.+.. |... .++ +..|++++|++|.+
T Consensus 242 ~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~ 321 (476)
T PLN02955 242 LLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAA 321 (476)
T ss_pred HHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccch
Confidence 88643 34566655 6668999999999999999999999999998776543 1111 011 26799999999996
Q ss_pred cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCc-cHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Q 010058 291 RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGP-HNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369 (519)
Q Consensus 291 ~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~-~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~ 369 (519)
|.+||++++++ ++.+.+....-+...++. +....++..++++.+... ...++++.+|.+++.
T Consensus 322 -G~~GGfi~gs~--------------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr 384 (476)
T PLN02955 322 -GCHGGFIACSK--------------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFK 384 (476)
T ss_pred -hccCceeecHH--------------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHH
Confidence 67799999988 445554433233333333 334445555667665432 345678888888888
Q ss_pred HHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHH
Q 010058 370 RSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 370 ~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
+. .|+.+ ..+++.+.+.. ......+.+.|.+.||.++....|. .|.+...+||++.+.++ ++|++
T Consensus 385 ~~---~G~~~-----~sPI~pI~ig~-~~~a~~~~~~L~~~Gi~v~~i~yPt--VP~g~~rLRi~lsA~Ht----~edId 449 (476)
T PLN02955 385 AL---SGVDI-----SSPIISLVVGN-QEKALKASRYLLKSGFHVMAIRPPT--VPPNSCRLRVTLSAAHT----TEDVK 449 (476)
T ss_pred Hh---cCCCC-----CCCEEEEEeCC-HHHHHHHHHHHHHCCCEEEEECCCC--CCCCCceEEEeeCCCCC----HHHHH
Confidence 73 36643 13344443332 1234567888999999997543333 24456789999999888 99999
Q ss_pred HHHHHHHHHHHH
Q 010058 450 KVAEFFDAAVKL 461 (519)
Q Consensus 450 ~l~~~l~~~l~~ 461 (519)
++++.|.++...
T Consensus 450 ~lv~~L~~~~~~ 461 (476)
T PLN02955 450 KLITALSSCLDF 461 (476)
T ss_pred HHHHHHHHHHhh
Confidence 999999887653
No 155
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=2.6e-21 Score=197.56 Aligned_cols=326 Identities=13% Similarity=0.060 Sum_probs=205.3
Q ss_pred HHHHHHHHHhcccCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCC
Q 010058 65 ADIIELEKARQWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-PAK 141 (519)
Q Consensus 65 ~~~~~~e~~~~~~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~~~ 141 (519)
...+.++.......++|..+++ ++++.+.+++.+.... . +| +...+..++++.+.+++.+.+|.+ .+.
T Consensus 10 ~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~--~Y------~~~~G~~~lr~~ia~~~~~~~~~~~~~~ 80 (357)
T TIGR03539 10 APYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADA-P--GY------PQTWGTPELREAIVDWLERRRGVPGLDP 80 (357)
T ss_pred HHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHhh-C--CC------CcccCCHHHHHHHHHHHHHhcCCCCCCc
Confidence 3344444333345678877654 4567888888765421 1 23 333555678877878888877654 322
Q ss_pred CcceEEeCCcHH-HHHHHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHH
Q 010058 142 WGVNVQSLSGSP-ANFQVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEK 219 (519)
Q Consensus 142 ~~~~V~~~sGs~-a~~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~ 219 (519)
.+|++|+|++ +...++..+ ++|||.|++.++.|.++... +...|..+..+ + |++.+.
T Consensus 81 --~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~v----~------~~~~l~- 139 (357)
T TIGR03539 81 --TAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVG--------ALLAGATPVAA----D------DPTELD- 139 (357)
T ss_pred --CeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHH--------HHhcCCEEecc----C------ChhhcC-
Confidence 3799999998 776677777 79999999999777665431 22334333222 1 223322
Q ss_pred HhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--------CCeEEEEcC
Q 010058 220 SAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--------YADVVTTTT 286 (519)
Q Consensus 220 ~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--------~~di~~~S~ 286 (519)
..++++|+++ ++| +|...+ +++|.++|+++|+++|+|+++.. +...+.....+. .-.+++.|+
T Consensus 140 ---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 215 (357)
T TIGR03539 140 ---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLE-LGWEGRPVSILDPRVCGGDHTGLLAVHSL 215 (357)
T ss_pred ---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhh-hccCCCCccceecccCCCccccEEEEecc
Confidence 2378999887 777 887776 56788889999999999999742 221111111010 124788899
Q ss_pred CCc--ccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHH
Q 010058 287 HKS--LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSN 364 (519)
Q Consensus 287 ~K~--l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~ 364 (519)
+|. ++|+|+||+++++ ++..++........ ..++.....++..++.. ....+..++.+.++
T Consensus 216 SK~~~~~G~R~G~~i~~~--------------~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~ 278 (357)
T TIGR03539 216 SKRSNLAGYRAGFVAGDP--------------ALVAELLTVRKHAG-LMVPAPVQAAMVAALGD--DGHVAEQKARYAAR 278 (357)
T ss_pred ccccCCCceeEEEEecCH--------------HHHHHHHHHHhhcc-cCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHH
Confidence 997 5889999999877 45554433222111 22333344444444432 22356677888899
Q ss_pred HHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCC
Q 010058 365 SSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 365 ~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~ 443 (519)
++.+.+.|.+.|+.+..+ ..+.++|+.+. .+..++.+.|.++||.+. |+.. ++...++|||++.. +
T Consensus 279 ~~~~~~~L~~~g~~~~~p-~~~~~~~~~~~---~~~~~~~~~l~~~gV~v~----pg~~f~~~~~~~iRis~~~--~--- 345 (357)
T TIGR03539 279 RAQLKPALEKAGFRIDHS-EAGLYLWATRG---EDAWDTVDRLAELGILVA----PGDFYGPAGSQHVRVALTA--T--- 345 (357)
T ss_pred HHHHHHHHHHcCCCCcCC-CccEEEEEECC---CCHHHHHHHHHhCCEEEC----CccccCCCCCCeEEEEecC--C---
Confidence 999999999988775543 33455566542 245678888889999996 5543 22335799999864 3
Q ss_pred CHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFF 455 (519)
Q Consensus 444 ~~~di~~l~~~l 455 (519)
++++++.++.|
T Consensus 346 -~~~i~~~~~~l 356 (357)
T TIGR03539 346 -DERIAAAVARL 356 (357)
T ss_pred -HHHHHHHHHhh
Confidence 67887777654
No 156
>PRK07908 hypothetical protein; Provisional
Probab=99.90 E-value=3.1e-21 Score=196.40 Aligned_cols=316 Identities=15% Similarity=0.144 Sum_probs=208.9
Q ss_pred hcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 74 RQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 74 ~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
+..+.++|..++|+ +|+.+++++.+.+.+.. +||. ..+...++ +.+++++|++++ +|.+|+|
T Consensus 20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~------~~g~~~lr----~aia~~~~~~~~----~I~it~G 83 (349)
T PRK07908 20 AGPGLLDFAVNVRHDTPPEWLRERLAARLGDLA--AYPS------TEDERRAR----AAVAARHGRTPD----EVLLLAG 83 (349)
T ss_pred CCCCeEEecCCCCCCCCCHHHHHHHHHHhhHhh--cCCC------ccchHHHH----HHHHHHhCcChh----hEEECCC
Confidence 34567899888884 58889999988775421 3433 23445555 777778898874 6999999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
++ ++..++. ++||+ +++..+.+..+.. .+...|..+..++ ++. ++.+|.+.+ .+ ++++++
T Consensus 84 a~~al~~~~~--l~~~~-viv~~P~y~~~~~--------~~~~~G~~i~~v~--~~~-~~~~d~~~l----~~-~~~~i~ 144 (349)
T PRK07908 84 AAEGFALLAR--LRPRR-AAVVHPSFTEPEA--------ALRAAGIPVHRVV--LDP-PFRLDPAAV----PD-DADLVV 144 (349)
T ss_pred HHHHHHHHHh--cCCCe-EEEeCCCChHHHH--------HHHHcCCEEEeec--cCc-ccCcChhHh----cc-CCCEEE
Confidence 98 7765555 67754 5556544443322 2233455555554 443 377888855 33 789988
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC--CCC-CeEEEEcCCCcc--cCCCcceEEeecc
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP--FEY-ADVVTTTTHKSL--RGPRGAMIFFRKG 303 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p--~~~-~di~~~S~~K~l--~GprgG~i~~~~~ 303 (519)
++ ++| +|...+.++|.++|++ +.++|+|+++.. +.. +..++. ... ..+++.|+||.+ +|+|.||+++++
T Consensus 145 l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~-~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~- 220 (349)
T PRK07908 145 IGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFAD-AVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP- 220 (349)
T ss_pred EcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchh-hcc-CCccccccccCCCEEEEeecccccCCccceeeeeecCH-
Confidence 87 777 8999999999999975 788999998642 221 111110 111 246667999965 689999999887
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGG 383 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 383 (519)
++.+.+....... +.+....+++...+.......+++.++++.++++.+.+.|.+.|+.+..+
T Consensus 221 -------------~~~~~~~~~~~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p- 283 (349)
T PRK07908 221 -------------DVLARLTRGRAHW---PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDP- 283 (349)
T ss_pred -------------HHHHHHHhcCCCC---CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccC-
Confidence 5555554432221 22233333333333211123456778889999999999999888876654
Q ss_pred CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+...++|+.+.. ..++.+.|+++||.++ ||+. +...+++|||++. + ++|+++++++|++++.
T Consensus 284 ~~g~~~~~~~~~----~~~~~~~l~~~gI~v~----~g~~f~~~~~~~vRis~~---~----~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 284 AAAPFVLVRVPD----AELLRKRLRERGIAVR----RGDTFPGLDPDYLRLAVR---P----RAEVPVLVQALAEILK 346 (349)
T ss_pred CCceEEEEECCc----HHHHHHHHHhCCEEEE----ECCCCCCCCCCeEEEEeC---C----CccHHHHHHHHHHHHh
Confidence 345666776542 5678888999999997 5554 2224679999974 3 6899999999998775
No 157
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.90 E-value=8.3e-22 Score=201.73 Aligned_cols=331 Identities=18% Similarity=0.195 Sum_probs=213.2
Q ss_pred CeeecCCCCCC------cHHHHHHHhh-HhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcc-eEEeC
Q 010058 78 GLELIPSENFT------SVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGV-NVQSL 149 (519)
Q Consensus 78 ~i~L~a~en~~------~~~V~ea~~~-~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~-~V~~~ 149 (519)
.|+|..+++.. ++++++++.+ ....... ..|+...+...+++...+++.+..|...+. . +|+++
T Consensus 3 ~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~~i~~~ 74 (363)
T PF00155_consen 3 VINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSF------LGYPPPQGYPELREAIADFLGRRYGVPVDP--EANILVT 74 (363)
T ss_dssp EEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGC------TSSTCTTHHHHHHHHHHHHHHHHHTHHTTG--GEGEEEE
T ss_pred EEEEECCCCCCcccccchHHHHHHHHHHhhccccc------ccCCCchhhHHHHHHHHHHhhhccCccccc--ceEEEEe
Confidence 46776665533 4556666554 2222111 234555677888866655555444443222 3 69999
Q ss_pred CcHH-HHHHHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh---
Q 010058 150 SGSP-ANFQVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--- 224 (519)
Q Consensus 150 sGs~-a~~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--- 224 (519)
+|+. ++..++..+ .++||+|+++++.|+.+.. .+...|.....+++... +++.+|++++++.+++.
T Consensus 75 ~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~ 145 (363)
T PF00155_consen 75 SGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIE--------AARLLGAEVIPVPLDSE-NDFHLDPEALEEALDELPSK 145 (363)
T ss_dssp SHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHH--------HHHHTTSEEEEEEEEET-TTTEETHHHHHHHHHTSHTT
T ss_pred cccccchhhhhhcccccccccceecCCccccccc--------cccccCceeeecccccc-cccccccccccccccccccc
Confidence 9998 555566666 6799999999977766643 23344555555554433 56899999999998864
Q ss_pred --CCcEEEEc-ccc-ccccccHHHHHHH---HhhcCCEEEehhhhhhhccccC-CCC--CCCC-CC-eEEEEcCCCcc--
Q 010058 225 --RPKLIVAG-ASA-YARLYDYARIRKV---CDKQKAVMLADMAHISGLVAAG-VIP--SPFE-YA-DVVTTTTHKSL-- 290 (519)
Q Consensus 225 --k~klIi~~-~sn-~g~~~d~~~i~~i---a~~~~~~livD~ah~~g~~~~~-~~~--~p~~-~~-di~~~S~~K~l-- 290 (519)
++++|+++ ++| +|...+.+++.++ |+++|+++|+|++|........ ..+ ..+. +. .+++.|++|.+
T Consensus 146 ~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~ 225 (363)
T PF00155_consen 146 GPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGL 225 (363)
T ss_dssp TETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTS
T ss_pred ccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccc
Confidence 46788877 666 8887776655555 9999999999999765433311 000 0001 22 58889999976
Q ss_pred cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC--HhHHHHHHHHHHHHHHH
Q 010058 291 RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT--PEYKAYQEQVLSNSSKF 368 (519)
Q Consensus 291 ~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~--~~~~~~~~~~~~~~~~l 368 (519)
.|.|.|++++++ ++.+.+.....++.. +.....++...+..... ...++..+++.++++.+
T Consensus 226 ~GlRvG~i~~~~--------------~~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l 288 (363)
T PF00155_consen 226 PGLRVGYIVAPP--------------ELIERLRRFQRSGLS---SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLL 288 (363)
T ss_dssp GGGTEEEEEEEH--------------HHHHHHHHHHHHTTS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchh--------------hhhhhhhhccccccc---cchhhHHHHHhhhcccccccccccchhhHHHHHHHH
Confidence 577789999977 555555544333322 33333333334433221 15688899999999999
Q ss_pred HHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHH
Q 010058 369 ARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEED 447 (519)
Q Consensus 369 ~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~d 447 (519)
.+.|.+.|+.+..+. .+.+.|+.+... +..++.+.|.+. ||.+. |+..... ++++|+++ +..+ +++
T Consensus 289 ~~~L~~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~----pg~~~~~-~~~iRi~~-a~~~----~e~ 355 (363)
T PF00155_consen 289 REALEEIGITVLPPE-AGFFLWVRLDPN--DAEELAQELLEEYGILVR----PGSYFGV-PGYIRISL-ASHS----EED 355 (363)
T ss_dssp HHHHHHTTSEEEHHS-BSSEEEEEESHH--HHHHHHHHHHHHHTEEEE----EGGGGTS-TTEEEEEG-GCSC----HHH
T ss_pred HHHHHHhhhheeecc-CccEEEEEcccc--hHHHHHHHHHHhCCEEEE----ecCCCCC-CCEEEEEe-ccCC----HHH
Confidence 999999999988754 355666655432 456777777665 99997 5443111 77999998 5566 799
Q ss_pred HHHHHHHH
Q 010058 448 FEKVAEFF 455 (519)
Q Consensus 448 i~~l~~~l 455 (519)
++++++.|
T Consensus 356 ~~~~~~~l 363 (363)
T PF00155_consen 356 LEEALERL 363 (363)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhC
Confidence 99998875
No 158
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=3.4e-21 Score=196.72 Aligned_cols=316 Identities=13% Similarity=0.104 Sum_probs=208.2
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.++|..++|+ +||.+.+++.+.+... .+||. .....++ +.+++.++++++ +|++|+|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~-------~~~~~lr----~~ia~~~~~~~~----~I~it~G~~ 92 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAERV--HSYPK-------ASHADLT----AALADRWDVSPE----QVWLANGGD 92 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhhh--hcCCC-------CCHHHHH----HHHHHHhCCCcc----eEEECCCHH
Confidence 356899888885 6788899988776542 23442 1234555 666677788875 699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||.|+++++.+..+.. .....|..+..++++.+ +++.+|.+++++... ++|+|+++
T Consensus 93 ~al~~~~~~~~~~gd~V~v~~P~y~~~~~--------~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~~--~~k~i~l~ 161 (357)
T PRK14809 93 GALDYLARAMLDPGDTVLVPDPGFAYYGM--------SARYHHGEVREYPVSKA-DDFEQTADTVLDAYD--GERIVYLT 161 (357)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCCeEEEEecccC-cCCCcCHHHHHHhhc--CCcEEEEe
Confidence 8777889999999999999966543321 22334555556655332 356788888877652 68998888
Q ss_pred -ccc-ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeeccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGV 304 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~~~ 304 (519)
++| +|...+.+++.++++.. ++++|+|+++.. +...+....-+. .--+++.|++|.+ +|.|.||+++++
T Consensus 162 ~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-- 238 (357)
T PRK14809 162 SPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGE-FAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE-- 238 (357)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhh-ccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--
Confidence 667 89999988888877654 789999998653 221110000001 2347778999986 588999999987
Q ss_pred ccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGT 384 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 384 (519)
++.+++.+...+. +.+.....+...++. ....+++.++.++++++.+.+.|...++ . .
T Consensus 239 ------------~~~~~~~~~~~~~---~~~~~~~~~a~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~---~--~ 296 (357)
T PRK14809 239 ------------EWADAYARVNTPF---AASELACRAGLAALD--DDEHVERTVETARWAREYIREELDAPTW---E--S 296 (357)
T ss_pred ------------HHHHHHHHhCCCC---CCCHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHhcCccC---C--C
Confidence 5566555432221 223333333233332 1223477777888888888888865432 2 2
Q ss_pred CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 385 ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 385 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
...++|+.+. +..++.+.|.++||.+. ||.... .+++|||++. + .+++++.++.|.++++
T Consensus 297 ~g~f~~~~~~----~~~~~~~~l~~~gv~v~----~g~~f~-~~~~iRls~~---~----~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 297 AGNFVLAEVG----DASAVAEAAQERGVIVR----DCTSFG-LPECIRITCG---T----REETERAVEVLNEVLA 356 (357)
T ss_pred CCCEEEEECC----CHHHHHHHHHHCCEEEE----ECccCC-CCCeEEEecC---C----HHHHHHHHHHHHHHhc
Confidence 3456677653 45678888888999997 444311 2468999864 3 6899999999988764
No 159
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=4.4e-21 Score=197.02 Aligned_cols=321 Identities=13% Similarity=0.080 Sum_probs=211.5
Q ss_pred CeeecCCCCC--CcHHHHHHHhhHhhhcc-CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCcceEEeCC
Q 010058 78 GLELIPSENF--TSVSVMQAVGSVMTNKY-SEGYPGARYYGGNEYIDMAESLCQKRALDAFQ----LDPAKWGVNVQSLS 150 (519)
Q Consensus 78 ~i~L~a~en~--~~~~V~ea~~~~l~~~~-~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g----~~~~~~~~~V~~~s 150 (519)
.++|..++|+ +|+.+.+++.+.+.+.. ..+| +. .+..++++...+++.+.+| +++ .+|++|+
T Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~-~G~~~Lr~aia~~~~~~~~~~~~v~~----~~I~it~ 98 (374)
T PRK02610 30 LDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRY------PD-GGHEALKQAIAEYVNESAAGSSQITP----ANISVGN 98 (374)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhcccccCC------CC-CchHHHHHHHHHHhCccccccCCCCH----HHEEEcC
Confidence 5788888885 68899999988766521 1123 22 3456777666666655542 555 3699999
Q ss_pred cHH-HHHHHHHhhcCCCC-EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh---hC
Q 010058 151 GSP-ANFQVYTALLKPHE-RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL---FR 225 (519)
Q Consensus 151 Gs~-a~~~~~~all~pGD-~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~---~k 225 (519)
|++ ++..++.+++.+|| .|+++++.+..+.. .+...|..+..++ .+++++.+|++++++++.+ .+
T Consensus 99 Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 99 GSDELIRSLLIATCLGGEGSILVAEPTFSMYGI--------LAQTLGIPVVRVG--RDPETFEIDLAAAQSAIEQTQNPP 168 (374)
T ss_pred ChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHH--------HHHHcCCEEEEec--CCcccCCCCHHHHHHHHHhhcCCC
Confidence 998 77767788888886 89999976655543 2334455555544 4545678999999998875 58
Q ss_pred CcEEEEc-ccc-ccccccHHHHHHHHhh-cCCEEEehhhhhhhccccCCCCCCCC-C-CeEEEEcCCCcc--cCCCcceE
Q 010058 226 PKLIVAG-ASA-YARLYDYARIRKVCDK-QKAVMLADMAHISGLVAAGVIPSPFE-Y-ADVVTTTTHKSL--RGPRGAMI 298 (519)
Q Consensus 226 ~klIi~~-~sn-~g~~~d~~~i~~ia~~-~~~~livD~ah~~g~~~~~~~~~p~~-~-~di~~~S~~K~l--~GprgG~i 298 (519)
+|+|+++ ++| +|..++.+++.++++- +++++|+|+++.. +..... ...+. + --+++.|++|++ +|.|.||+
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~-~~~~~~-~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~ 246 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFE-FSQTTL-VGELAQHPNWVILRTFSKAFRLAAHRVGYA 246 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccc-cCccch-HHHHhcCCCEEEEEecchhccCcccceeee
Confidence 9999988 666 8888887777666542 4899999998642 111000 00011 1 247788999976 78999999
Q ss_pred EeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CC
Q 010058 299 FFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GY 377 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 377 (519)
++++ ++.+.+.....+. +.+.....+...+++.. ..+.+..+++.+.++.+.+.|+++ |+
T Consensus 247 v~~~--------------~l~~~l~~~~~~~---~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~ 307 (374)
T PRK02610 247 IGHP--------------ELIAVLEKVRLPY---NLPSFSQLAAQLALEHR--QELLAAIPEILQERDRLYQALQELPQL 307 (374)
T ss_pred ecCH--------------HHHHHHHHhcCCC---CCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9877 5556555443222 22333333334444421 234444455556677888888877 66
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
.+. + +.+.++|+.+.. +.+..++.+.|.+.||.++ ++ .+++||++. + ++++++.++.|.+
T Consensus 308 ~~~-p-~~g~f~~~~l~~-~~~~~~~~~~l~~~gi~v~----~~------~~~lRls~~---~----~~~~~~~l~~l~~ 367 (374)
T PRK02610 308 RVW-P-SAANFLYLRLSQ-DAALAALHQALKAQGTLVR----HT------GGGLRITIG---T----PEENQRTLERLQA 367 (374)
T ss_pred EeC-C-CcceEEEEeCCC-CCCHHHHHHHHHHCCEEEE----eC------CCeEEEeCC---C----HHHHHHHHHHHHH
Confidence 653 2 345567777643 4567888888989999996 21 357999965 2 5678888888888
Q ss_pred HHH
Q 010058 458 AVK 460 (519)
Q Consensus 458 ~l~ 460 (519)
++.
T Consensus 368 ~l~ 370 (374)
T PRK02610 368 ALT 370 (374)
T ss_pred HHh
Confidence 775
No 160
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=205.29 Aligned_cols=349 Identities=14% Similarity=0.147 Sum_probs=210.0
Q ss_pred cCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH-HHHcCC--CC-CCCcceEEeCC
Q 010058 77 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA-LDAFQL--DP-AKWGVNVQSLS 150 (519)
Q Consensus 77 ~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~-~~~~g~--~~-~~~~~~V~~~s 150 (519)
+.|+|..++. .+++.|.++......+ . |+...+..++++++.+++ .+.++. .+ +. .+|++|+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~~~----~------Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~--~~I~vT~ 168 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGIIGD----N------YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGE--FDLFAVE 168 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHhcC----C------CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCc--CeEEEeC
Confidence 3467766665 3467777755444322 2 344455566666665544 343332 22 11 2799999
Q ss_pred cHH-HHHHHHHh-----hcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhh
Q 010058 151 GSP-ANFQVYTA-----LLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAAL 223 (519)
Q Consensus 151 Gs~-a~~~~~~a-----ll~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~ 223 (519)
|++ |+..++.+ +++|||+|+++++.+..+.. .+.+.|...+.++++.++ +++.+|.+++++++++
T Consensus 169 Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~--------~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 169 GGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLE--------IPELPRYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred CHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHH--------HHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 998 77767775 68999999999976655543 233445455566665543 3588999999998876
Q ss_pred hCCcEEEEc-ccc-cccccc---HHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCC---CCCCeEEEEcCCCcc--c
Q 010058 224 FRPKLIVAG-ASA-YARLYD---YARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSP---FEYADVVTTTTHKSL--R 291 (519)
Q Consensus 224 ~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p---~~~~di~~~S~~K~l--~ 291 (519)
++|+|+++ |+| +|...+ +++|.++|++ +|++||+|+++.. +.. .. .+. .+...+++.|++|++ +
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~-f~~-~~-~s~~~~~~~~~I~v~SfSK~f~mt 316 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGT-FVD-DF-RSLFAVLPYNTILVYSFSKYFGAT 316 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChh-hcc-cc-cCHHHhCCCCEEEEeehhhhccCc
Confidence 89999987 877 887777 6677778854 5999999998642 221 11 110 113468888999975 8
Q ss_pred CCCcceEEeecccc---ccc-c-----------cC----cchhhhHHHHh----hhcccCCCCCCccHHHHH-H---HHH
Q 010058 292 GPRGAMIFFRKGVK---EIN-K-----------QG----QEVMYAYEDKI----NQAVFPGLQGGPHNHTIS-G---LAV 344 (519)
Q Consensus 292 GprgG~i~~~~~~~---~~~-~-----------~g----~~~~~~~~~~i----~~~~~~~~~g~~~~~~ia-a---l~~ 344 (519)
|+|.||++++++.. ... . .+ ......+++++ .........|.+...+.+ + +.+
T Consensus 317 G~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~a 396 (527)
T PRK09275 317 GWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFA 396 (527)
T ss_pred HhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 99999999987410 000 0 00 00000111111 111011111333333333 2 223
Q ss_pred HHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec-CCCCcceeeeeccCCC---------------CcHHHH-HHhh
Q 010058 345 ALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS-GGTENHLVLVNLRNKG---------------IDGSRV-EKVL 407 (519)
Q Consensus 345 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~v~~~~~~---------------~~~~~~-~~~L 407 (519)
+++. .+...++.++.++++++.+.+.| |+.+.. ++...++.++++...+ .+..++ .+++
T Consensus 397 ll~~-~~~~~~~~~~~~~~Rr~~l~~~L---g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll 472 (527)
T PRK09275 397 LLDE-EDAYKKAMKDIIRRRYKALYEGL---GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLA 472 (527)
T ss_pred HHhC-chHHHHHHHHHHHHHHHHHHHHc---CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHH
Confidence 3332 22334777888888888888877 443321 2334567778774311 234444 4566
Q ss_pred cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHh
Q 010058 408 ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLAL 463 (519)
Q Consensus 408 ~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~ 463 (519)
++.||.+. ||.. +. ..+++|+++.... ++++..+.+.|.+++....
T Consensus 473 ~e~gV~v~----PG~~Fg~-~~~~vRis~a~~~-----~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 473 EETGVVLL----PGGGFGG-PEWSVRVSLANLN-----EEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred hcCCEEEe----CchhhCC-CCCeEEEEEecCC-----HHHHHHHHHHHHHHHHHHH
Confidence 78999984 7776 32 3578999985432 6899999999998887553
No 161
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.89 E-value=1.2e-21 Score=198.18 Aligned_cols=329 Identities=14% Similarity=0.128 Sum_probs=217.3
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCC----CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc--HHHHHHHHHh
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARY----YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG--SPANFQVYTA 161 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~----y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG--s~a~~~~~~a 161 (519)
.|..|++++.+.+.+ |. +.+... ....++ .++-+.+++.++++|+.+.+. .|.+++| |.++.+++.+
T Consensus 3 ~p~~v~~~~~~~~~~-~~--~~~~~~~~~~hr~~~f-~~~~~~~~~~l~~l~~~~~~~---~v~~~~gsgT~a~ea~~~n 75 (349)
T TIGR01364 3 LPEEVLEQAQKELLN-FN--GTGMSVMEISHRSKEF-EAVANEAESDLRELLNIPDNY---EVLFLQGGATGQFAAVPLN 75 (349)
T ss_pred CCHHHHHHHHHHHhC-cc--CCCccccccCCCchHH-HHHHHHHHHHHHHHhCCCCCc---eEEEEcCCchHHHHHHHHh
Confidence 588999999999886 32 111111 112222 355567889999999974332 3555544 4499999999
Q ss_pred hcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC-CCCCCCCHHHHHHHhhhhCCcEEEEc--cccccc
Q 010058 162 LLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD-ESTGYIDYEQLEKSAALFRPKLIVAG--ASAYAR 238 (519)
Q Consensus 162 ll~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d-~~~~~iD~d~l~~~i~~~k~klIi~~--~sn~g~ 238 (519)
++.+||+++++.....++ .+. +.....|. +..+..+.. +.+..+|+++++. ++ ++++|.++ .+++|.
T Consensus 76 l~~~~~~~l~i~~G~fg~---r~~---~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~th~ETstGv 145 (349)
T TIGR01364 76 LLAEGKVADYIVTGAWSK---KAA---KEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--SE-DAAYVHYCANETIHGV 145 (349)
T ss_pred cCCCCCeEEEEECCHHHH---HHH---HHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--CC-CCCEEEEcCCCCcccE
Confidence 999999999887443333 221 11222344 444432211 1234567776662 33 78998887 444787
Q ss_pred cccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--cccccCcchh
Q 010058 239 LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQGQEVM 315 (519)
Q Consensus 239 ~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~~g~~~~ 315 (519)
..+ ++++.+++++++|++++.|..+.++.. .|++++|+||+| ||.| |+++++++.. ..+.... .
T Consensus 146 ~~~-----~l~~~~~~l~iVDavss~g~~~id~~~-----~d~~~~ssqK~l-gP~Glg~l~~s~~~~~~~~~~~~~--~ 212 (349)
T TIGR01364 146 EFR-----ELPDVKNAPLVADMSSNILSRPIDVSK-----FGLIYAGAQKNI-GPAGLTVVIVRKDLLGRASRITPS--M 212 (349)
T ss_pred ecc-----eecccCCCeEEEEccccccCccCCHHH-----ccEEEEeccccc-CCCceEEEEECHHHHhhcccCCCC--c
Confidence 665 677788999999999999988877654 479999999988 6888 9999988642 2221110 1
Q ss_pred hhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcce-eeee
Q 010058 316 YAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHL-VLVN 392 (519)
Q Consensus 316 ~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~-~~v~ 392 (519)
.++....... ...+||+.+.+.++.++++++... +++.+.++..++++++.+.|+++ |+.........+. .++.
T Consensus 213 ~~~~~~~~~~---~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~s 289 (349)
T TIGR01364 213 LNYKIHAEND---SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVV 289 (349)
T ss_pred chHHHHHhcC---CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEE
Confidence 1111111111 123799999999999999999888 69999999999999999999999 6544421111122 2333
Q ss_pred ccCCCC-cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 393 LRNKGI-DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 393 ~~~~~~-~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+...+. ...++.+.+.+.||.+. ++.. ..+.+|+|+..+++ .+|+++++++|+++++
T Consensus 290 f~~~~~~~~~~~~~~~~~~Gi~~~----~~~~---~~g~vRvS~~~~nt----~edid~l~~al~~~~~ 347 (349)
T TIGR01364 290 FTLGNEELEKRFLKEAEERGLVSL----KGHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFQK 347 (349)
T ss_pred EecCChhHhHHHHHHHHHCCCccc----CCcc---ccCeeEEECcCCCC----HHHHHHHHHHHHHHHH
Confidence 433221 12455567778999543 3332 23589999999999 9999999999998765
No 162
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.1e-20 Score=195.48 Aligned_cols=337 Identities=15% Similarity=0.146 Sum_probs=214.9
Q ss_pred cCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCcH
Q 010058 77 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sGs 152 (519)
+.++|..+.+ ++++.+.+++...+.+.. +....|+...+...+++.+.+++.+.++. +++ +|.+++|+
T Consensus 34 ~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~ 105 (394)
T PRK06836 34 NVFDFSLGNPSVPPPAAVKEALRELAEEED----PGLHGYMPNAGYPEVREAIAESLNRRFGTPLTAD----HIVMTCGA 105 (394)
T ss_pred CeEEecCcCCCCCCCHHHHHHHHHHHhcCC----cCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcC----cEEEeCCh
Confidence 3477765544 346889998887765421 11123444556677777777777666554 453 69999999
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
+ ++..++.++++|||.|+++++.+.++... ....|..+..++ .+++++.+|++++++++++ ++++|++
T Consensus 106 ~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~--------~~~~g~~v~~v~--~~~~~~~~d~~~l~~~~~~-~~~~v~~ 174 (394)
T PRK06836 106 AGALNVALKAILNPGDEVIVFAPYFVEYRFY--------VDNHGGKLVVVP--TDTDTFQPDLDALEAAITP-KTKAVII 174 (394)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHHH--------HHHcCCEEEEEe--cCCccCcCCHHHHHhhcCc-CceEEEE
Confidence 8 87778889999999999999776665431 223355444554 4555578999999999976 8999988
Q ss_pred c-ccc-cccccc---HHHHHHHHhh------cCCEEEehhhhhhhccccC-CCCCCCC--CCeEEEEcCCCcc--cCCCc
Q 010058 232 G-ASA-YARLYD---YARIRKVCDK------QKAVMLADMAHISGLVAAG-VIPSPFE--YADVVTTTTHKSL--RGPRG 295 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~------~~~~livD~ah~~g~~~~~-~~~~p~~--~~di~~~S~~K~l--~Gprg 295 (519)
+ ++| +|...+ +++|.++|++ ||+++++|+++.. +...+ ..+..+. ...+++.|++|.+ +|.|.
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRi 253 (394)
T PRK06836 175 NSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYRE-IVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERI 253 (394)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccc-cccCCCCCCChHHccCcEEEEecchhhccCcceee
Confidence 8 666 787776 5566677888 8999999998642 22221 1111011 2468889999977 47788
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhc-ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQA-VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
||++++++.... ..+...+... ...+. ...+.....++...+. . .. ..+.+.++++.+.+.|++
T Consensus 254 G~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~---~-~~--~~~~~~~~r~~l~~~L~~ 318 (394)
T PRK06836 254 GYIAVNPEMEDA--------DDLVAALVFANRILGF-VNAPALMQRVVAKCLD---A-TV--DVSIYKRNRDLLYDGLTE 318 (394)
T ss_pred EEEecCHHHhhh--------HHHHHHHHHHhhcccc-ccCCHHHHHHHHHHhC---C-hH--HHHHHHHHHHHHHHHHHh
Confidence 999998732100 0011111100 00011 1122222333333322 2 11 245677888999999999
Q ss_pred cCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 375 RGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 375 ~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
.|+.+..+ ..+.++|+.+.. .+..++.+.|.+.||.+. ||.... .++++||++. .+ +++++..++.
T Consensus 319 ~g~~~~~~-~gg~~~~~~~~~--~~~~~~~~~l~~~gv~v~----~g~~f~-~~~~iRi~~~--~~----~~~~~~~i~~ 384 (394)
T PRK06836 319 LGFECVKP-QGAFYLFPKSPE--EDDVAFCEKAKKHNLLLV----PGSGFG-CPGYFRLSYC--VD----TETIERSLPA 384 (394)
T ss_pred CCCEeecC-CceEEEEEeCCC--CCHHHHHHHHHhCCEEEE----CchhcC-CCCeEEEEec--CC----HHHHHHHHHH
Confidence 88876554 234555655432 367778888888999996 554311 2478999986 24 7899999999
Q ss_pred HHHHHHHH
Q 010058 455 FDAAVKLA 462 (519)
Q Consensus 455 l~~~l~~~ 462 (519)
|.++++..
T Consensus 385 l~~~l~~~ 392 (394)
T PRK06836 385 FEKLAKEY 392 (394)
T ss_pred HHHHHHHh
Confidence 99888643
No 163
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.89 E-value=5.6e-21 Score=200.04 Aligned_cols=331 Identities=18% Similarity=0.191 Sum_probs=221.7
Q ss_pred HHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCE
Q 010058 90 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHER 168 (519)
Q Consensus 90 ~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~ 168 (519)
....+++...+.+ + +....-+|+...+...+++.+.+++....|+..+. .+|++|+|++ |+..++..+++|||.
T Consensus 107 ~~~~~~~~~~~~~-~--~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~--~~IiiT~G~q~al~l~~~~l~~pGd~ 181 (459)
T COG1167 107 EALRRALARVLRN-Y--GASLALQYGPTAGLPELREAIAAYLLARRGISCEP--EQIVITSGAQQALDLLLRLLLDPGDT 181 (459)
T ss_pred HHHHHHHHHHHhh-c--chhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCc--CeEEEeCCHHHHHHHHHHHhCCCCCE
Confidence 3445555555543 1 11112345665778889988888888677775432 4799999999 888899999999999
Q ss_pred EEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc---ccccccH---
Q 010058 169 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA---YARLYDY--- 242 (519)
Q Consensus 169 Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn---~g~~~d~--- 242 (519)
|++-+++|.+.+. .....|..+..|| +| ...+|+|++++.+..+++|++++.|+. +|...+.
T Consensus 182 v~vE~PtY~~~~~--------~~~~~g~~~~~vp--~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR 249 (459)
T COG1167 182 VLVEDPTYPGALQ--------ALEALGARVIPVP--VD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERR 249 (459)
T ss_pred EEEcCCCcHHHHH--------HHHHcCCcEEecC--CC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHH
Confidence 9999977766654 3334455555554 44 356899999999998899999999444 6766665
Q ss_pred HHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-----CCeEEEEcCCCcc-cCCCcceEEeecccccccccCcchhh
Q 010058 243 ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-----YADVVTTTTHKSL-RGPRGAMIFFRKGVKEINKQGQEVMY 316 (519)
Q Consensus 243 ~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-----~~di~~~S~~K~l-~GprgG~i~~~~~~~~~~~~g~~~~~ 316 (519)
++|.++|++||+++|.|..+. -+...+..+.|+. +--++++|++|+| +|.|.||+++++
T Consensus 250 ~~Ll~lA~~~~~~IIEDD~y~-el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~-------------- 314 (459)
T COG1167 250 KALLALAEKYDVLIIEDDYYG-ELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP-------------- 314 (459)
T ss_pred HHHHHHHHHcCCeEEeeCcch-hhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCH--------------
Confidence 589999999999999998743 2222222221221 4568999999997 799999999998
Q ss_pred hHHHHhhhcccCCCCCCccHHHHHHHHHHHHH-hcCHhHHHHHHHHHHHHHHHHHHHHhcC--CEEecCCCCcceeeeec
Q 010058 317 AYEDKINQAVFPGLQGGPHNHTISGLAVALKQ-VKTPEYKAYQEQVLSNSSKFARSLLERG--YDLVSGGTENHLVLVNL 393 (519)
Q Consensus 317 ~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~v~~ 393 (519)
++.+++......... +++.....+++.-+.. .-....+..++.+.++++.+.+.|.+.+ ...+..+....++|+.+
T Consensus 315 ~~~~~~~~~k~~~~~-~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l 393 (459)
T COG1167 315 ELIEKLLRLKQAADL-GPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLEL 393 (459)
T ss_pred HHHHHHHHHHHHhcC-CCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEc
Confidence 444443322211111 2233333333333331 1122347778888899999999999983 23333333345566665
Q ss_pred cCCCCcHHHHHHhhcccCeEEcccccCCCC---CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 394 RNKGIDGSRVEKVLESVHIAANKNTVPGDV---SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 394 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
. .+++..++...+.+.||.+.. +|.. .+...+++|+|+...+ ++++++.++.|.+++...
T Consensus 394 ~-~~~~~~~l~~~a~~~gv~i~~---~g~~f~~~~~~~~~~Rl~~s~~~-----~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 394 P-EGIDARELLAAALEKGVVVTP---LGSAFSADGDPRNGLRLSFSSPS-----EEEIEEGIKRLAALLREA 456 (459)
T ss_pred C-CCCCHHHHHHHHHHCCCEEEc---CCccccCCCCCCCeEEEEcCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 4 467888888888889999862 1443 2224568999988665 489999999988888753
No 164
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=2.9e-21 Score=197.51 Aligned_cols=333 Identities=14% Similarity=0.132 Sum_probs=202.0
Q ss_pred CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-cC
Q 010058 87 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-LK 164 (519)
Q Consensus 87 ~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-l~ 164 (519)
..+++.++++.+++...+ +++......++| +++++++|.+. +++++|++ |+..++.++ ++
T Consensus 8 ~~~~~e~~a~~~~~~~~~--------~~~~g~~~~~~e----~~la~~~g~~~------~v~~~sgt~aL~~~l~al~~~ 69 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGK--------LSGDGPFSRRCE----TWLENRTGTKK------ALLTPSCTAALEMAALLLDIQ 69 (376)
T ss_pred CCCHHHHHHHHHHHHcCC--------ccCCcHHHHHHH----HHHHHHhCCCe------EEEeCCHHHHHHHHHHHcCCC
Confidence 346677888888876632 122224455566 88888888864 55555555 777677887 89
Q ss_pred CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHH
Q 010058 165 PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYAR 244 (519)
Q Consensus 165 pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~ 244 (519)
|||+|++++++|.+.... +...|..+..+ +++++++.+|++++++++++ +||+|+.+. .+|...|+++
T Consensus 70 pGd~Viv~~~t~~~~~~~--------~~~~G~~~v~v--d~d~~~~~~d~~~le~~i~~-~tk~Iip~~-~~G~~~d~~~ 137 (376)
T TIGR02379 70 PGDEVIMPSYTFVSTANA--------FVLRGAKIVFV--DIRPDTMNIDETLIESAITH-RTKAIVPVH-YAGVACDMDT 137 (376)
T ss_pred CcCEEEECCCCcHHHHHH--------HHHcCCEEEEE--ecCCCcCCCCHHHHHHhcCc-CceEEEEeC-CCCCccCHHH
Confidence 999999999887766442 22345544444 46666788999999999987 899987542 2788999999
Q ss_pred HHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC--Ccc-cCCCcceEEeecc-c--cccc--ccCcchhh
Q 010058 245 IRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSL-RGPRGAMIFFRKG-V--KEIN--KQGQEVMY 316 (519)
Q Consensus 245 i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~--K~l-~GprgG~i~~~~~-~--~~~~--~~g~~~~~ 316 (519)
|.++|+++|++||+|++|..|....+..... ..|+.++|+| |.+ +|++||+++++++ + ++.. .+|.....
T Consensus 138 I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~--~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~ 215 (376)
T TIGR02379 138 IMALANKHQLFVIEDAAQGVMSTYKGRALGS--IGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQ 215 (376)
T ss_pred HHHHHHHCCCEEEEECccccCCccCCcccCC--CCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999998876543332222 3466777765 445 4679999999864 1 1111 11111000
Q ss_pred hHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC----CEEe--cCCC--Ccce
Q 010058 317 AYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG----YDLV--SGGT--ENHL 388 (519)
Q Consensus 317 ~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~--~~~~--~~~~ 388 (519)
......+...+.....+..+..+.| +.++.++ ..+++..++.+++++.+.+.|.++. ..+. .++. ..|+
T Consensus 216 ~~~~~~~~~~~~~~g~n~~~~~~~A-a~g~~qL--~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
T TIGR02379 216 FFRGEVDKYTWRDIGSSYLPSELQA-AYLWAQL--EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHM 292 (376)
T ss_pred ccccCCCcceeeeecccCCccHHHH-HHHHHHH--HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEE
Confidence 0000000000000001111122221 2222222 2467778888888888888887652 2221 1111 1234
Q ss_pred eeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCC----CC-------------CCeEEeccCccccCCCCHHHHHHH
Q 010058 389 VLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA----MV-------------PGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 389 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~----~~-------------~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
+++.+.. +.+.+++.+.|.+.||.++..+.|.+..+ .. ...|.+-++. +|+++|++++
T Consensus 293 ~~i~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~----~l~~~~~~~i 367 (376)
T TIGR02379 293 FYIKLKD-EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYY----GLSKEDQARV 367 (376)
T ss_pred EEEEECC-cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCC----CCCHHHHHHH
Confidence 4444432 34678899999999999886655554321 00 1123333332 4669999999
Q ss_pred HHHHHHHH
Q 010058 452 AEFFDAAV 459 (519)
Q Consensus 452 ~~~l~~~l 459 (519)
++.|++++
T Consensus 368 ~~~i~~~~ 375 (376)
T TIGR02379 368 IQTICDYL 375 (376)
T ss_pred HHHHHHHh
Confidence 99998764
No 165
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.89 E-value=1.4e-21 Score=199.09 Aligned_cols=339 Identities=11% Similarity=0.041 Sum_probs=222.3
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-C-cHHHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSL-S-GSPANF 156 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~-s-Gs~a~~ 156 (519)
..+++++..+++.|++++.+....-. +.++ -+.++. ++-+.+++.+++++|++.+. +|.++ + ||.++.
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~~~~---~~~h---r~~~f~-~~~~~~r~~l~~l~~~~~~~---~v~f~~gs~T~a~~ 74 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAASLF---GTSH---RQAPVK-NLVGRVREGLAELFSLPDGY---EVILGNGGATAFWD 74 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCcccc---ccCc---CChHHH-HHHHHHHHHHHHHhCCCCCc---eEEEECCchhHHHH
Confidence 46789999999999999874311000 0111 122344 44457889999999995432 46664 3 344888
Q ss_pred HHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc
Q 010058 157 QVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA 235 (519)
Q Consensus 157 ~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn 235 (519)
+++.+++.+ +.+++.+-.++..+.+...... ..+ .++.+++ + .+..++. .+.+ ++++|.++ .+|
T Consensus 75 ~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~----~~~-~~~~~~~--~-~~~~~~~-----~~~~-~~~lV~~~h~et 139 (361)
T TIGR01366 75 AATFGLIEK-KSLHLSFGEFSSKFAKAVKLAP----WLG-EPIIVTA--D-PGSAPEP-----QADP-GVDVIAWAHNET 139 (361)
T ss_pred HHHHhcccc-cccEEecCHHHHHHHHHHHhhh----ccC-CceEEec--C-CCCCCCC-----ccCC-CCCEEEEcccCC
Confidence 788888743 3333333333322222221100 011 2333433 2 2233443 2333 89999998 444
Q ss_pred -ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--cccc-cc
Q 010058 236 -YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEIN-KQ 310 (519)
Q Consensus 236 -~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~~~~-~~ 310 (519)
+|...|+++| ++++|+++++|++++.|..+.++. .+|++++|.||+|++|.| ++++.+++. ++.+ ..
T Consensus 140 ~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~-----~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~ 211 (361)
T TIGR01366 140 STGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIA-----ETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAA 211 (361)
T ss_pred ccceecccccc---cccCCCeEEEEcCccccCCCCCHH-----HCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccC
Confidence 8999998887 688999999999999998877664 379999999999988766 455666653 2333 22
Q ss_pred Ccc---hhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcC-CEEecCCC-
Q 010058 311 GQE---VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERG-YDLVSGGT- 384 (519)
Q Consensus 311 g~~---~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~- 384 (519)
|+. ...++........-.+..++|+...+.++..+++++... +++...++..+.++++.+.|.+.+ ++++....
T Consensus 212 ~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~ 291 (361)
T TIGR01366 212 SGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPG 291 (361)
T ss_pred CCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChh
Confidence 321 112333222222123455789999999999999999877 588889999999999999999996 55553211
Q ss_pred --CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 385 --ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 385 --~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
......+.+ +.+++..++.+.|.++||.+. ++. .....+.+|+|...++| ++|+++++++|+++++
T Consensus 292 ~~s~~v~~v~~-~~g~~~~~v~~~L~~~gI~i~----~~~-~~l~~~~vRis~~~~~t----~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 292 KRSQVVGTIDF-VDDIDAATVAKILRANGIVDT----EPY-RKLGRNQLRVAMFPAID----PDDVEALTECVDWVVE 359 (361)
T ss_pred hcccceEEEEC-CCccCHHHHHHHHHHCCCeec----cCc-cccCCCcEEEEcCCCCC----HHHHHHHHHHHHHHHh
Confidence 122244555 467888999999988999985 222 12334679999999999 9999999999999775
No 166
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.89 E-value=8.7e-21 Score=192.61 Aligned_cols=303 Identities=16% Similarity=0.155 Sum_probs=203.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCcee
Q 010058 114 YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKIS 192 (519)
Q Consensus 114 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~ 192 (519)
|+......++++..++.+...++..... .++.+++|++ ++..++.++.++||+|++++..|.++... +.
T Consensus 32 ~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~--------~~ 101 (350)
T cd00609 32 YYPDPGLPELREAIAEWLGRRGGVDVPP--EEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAA--------AR 101 (350)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH--------HH
Confidence 3444667788877777777776642111 3577888776 88889999999999999999877766442 23
Q ss_pred eeeeeeEEEeeeeCCCCCCCCH--HHHHHHhhhhCCcEEEEc-ccc-ccccccHHHH---HHHHhhcCCEEEehhhhhhh
Q 010058 193 AVSIFFETMPYRLDESTGYIDY--EQLEKSAALFRPKLIVAG-ASA-YARLYDYARI---RKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 193 ~~g~~~~~v~~~~d~~~~~iD~--d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i---~~ia~~~~~~livD~ah~~g 265 (519)
..|..+..++. +. ++..+. +.++..+.+ ++++|++. ++| +|...|.+++ .++|+++|+++|+|++|..+
T Consensus 102 ~~~~~~~~i~~--~~-~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~ 177 (350)
T cd00609 102 LAGAEVVPVPL--DE-EGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAEL 177 (350)
T ss_pred HCCCEEEEEec--cc-ccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhc
Confidence 34544555553 32 233333 566665554 89999988 444 7877776555 58999999999999998654
Q ss_pred ccccCCC---CCC-CCCCeEEEEcCCCccc--CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHH
Q 010058 266 LVAAGVI---PSP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTI 339 (519)
Q Consensus 266 ~~~~~~~---~~p-~~~~di~~~S~~K~l~--GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~i 339 (519)
....... ... ..++|+++.|+||+++ |++.|+++++++ ++.+.+..... ...++++....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~ 243 (350)
T cd00609 178 VYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-------------ELLERLKKLLP-YTTSGPSTLSQ 243 (350)
T ss_pred eeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-------------HHHHHHHHHHH-hcccCCChHHH
Confidence 4322111 001 1157899999999984 566799999883 34444433221 22356677777
Q ss_pred HHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEccccc
Q 010058 340 SGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTV 419 (519)
Q Consensus 340 aal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~ 419 (519)
.++..+++... .++++..+++.++++++.+.|.+.+...+.......+.++.+.. +.+...+.+.|.++||.++.
T Consensus 244 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~gi~i~~--- 318 (350)
T cd00609 244 AAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPE-GDDEEFLERLLLEAGVVVRP--- 318 (350)
T ss_pred HHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCC-CChHHHHHHHHHhCCEEEec---
Confidence 77777777543 46788899999999999999999865442222334455555543 23466778888889999973
Q ss_pred CCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 420 PGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 420 p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
+.. .+..+.++|++++.. .+|+++++++|+
T Consensus 319 -~~~~~~~~~~~iRi~~~~~------~~~i~~~~~al~ 349 (350)
T cd00609 319 -GSAFGEGGEGFVRLSFATP------EEELEEALERLA 349 (350)
T ss_pred -ccccccCCCCeEEEEeeCC------HHHHHHHHHHhh
Confidence 222 113567899998765 489999999885
No 167
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.89 E-value=4.2e-21 Score=212.64 Aligned_cols=314 Identities=16% Similarity=0.127 Sum_probs=217.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH---HHHHHHHhhcCC-CC----EEEEecCCCcccccccccccCC
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP---ANFQVYTALLKP-HE----RIMALDLPHGGHLSHGYQTDTK 189 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~---a~~~~~~all~p-GD----~Vl~~~~~~~~~~~~~~~~~~~ 189 (519)
++..++-..+++++++++|.+. +.+++.+|++ ++..++.+++++ || +|+++..+|++...++.
T Consensus 564 ~g~~~~~~~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~----- 634 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA----- 634 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH-----
Confidence 4556666788899999999954 4566666654 667788888876 98 89999999999876554
Q ss_pred ceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh--hCCcEEEEc-cccc-cccccHHHHHHHHhhcCCEEEehhhhhhh
Q 010058 190 KISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL--FRPKLIVAG-ASAY-ARLYDYARIRKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 190 ~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~--~k~klIi~~-~sn~-g~~~d~~~i~~ia~~~~~~livD~ah~~g 265 (519)
..|..++.+++ | +++.+|+++|++++++ .++++|++. +||+ |...|+++|.++|+++|+++++|++|..+
T Consensus 635 ---~~G~~vv~v~~--d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a 708 (993)
T PLN02414 635 ---MCGMKIVVVGT--D-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNA 708 (993)
T ss_pred ---HCCCEEEEecc--C-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHh
Confidence 24655666654 4 4689999999999985 267888888 7775 56677999999999999999999999887
Q ss_pred ccccCC-CCCCCCCCeEEEEcCCCcccCCCc------ceEEeecccc-ccc-c-cCcchhhhHHHHhhhcccCCCCCCcc
Q 010058 266 LVAAGV-IPSPFEYADVVTTTTHKSLRGPRG------AMIFFRKGVK-EIN-K-QGQEVMYAYEDKINQAVFPGLQGGPH 335 (519)
Q Consensus 266 ~~~~~~-~~~p~~~~di~~~S~~K~l~Gprg------G~i~~~~~~~-~~~-~-~g~~~~~~~~~~i~~~~~~~~~g~~~ 335 (519)
+..... ... ++|++++|.||+|.+|.| |++.+++.+. ..| + .|.+.. ... +.. +...|+.+
T Consensus 709 ~~~l~~p~~~---GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~--~~~---r~~-~s~iGt~~ 779 (993)
T PLN02414 709 QVGLTSPGFI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGG--IPR---PEK-TQPLGTIS 779 (993)
T ss_pred ccCcCCcccc---CCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCC--ccc---ccC-CCCcCCcc
Confidence 643211 122 799999999999986653 7888887542 223 1 111110 001 000 11123322
Q ss_pred ----HHHHH--HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCC---CCcceeeeeccC----CCCcHHH
Q 010058 336 ----NHTIS--GLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGG---TENHLVLVNLRN----KGIDGSR 402 (519)
Q Consensus 336 ----~~~ia--al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~~~~~~v~~~~----~~~~~~~ 402 (519)
.+... ....-+..+..+++++..++...|++++++.|.+ ++.+...+ .-.|-+++++.. .+++..+
T Consensus 780 ~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~d 858 (993)
T PLN02414 780 AAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPED 858 (993)
T ss_pred chhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHH
Confidence 11111 1122234555567778899999999999999988 45444332 223445566552 1366688
Q ss_pred HHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 010058 403 VEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIK 466 (519)
Q Consensus 403 ~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~ 466 (519)
+.+.|.++||..-...+| ..+.+|+++..+++ .+|++++++++..+.....++.
T Consensus 859 i~krL~d~Gihapt~~~p------v~~~lmiepTE~~s----keelDrf~~al~~i~~e~~~~~ 912 (993)
T PLN02414 859 VAKRLMDYGFHAPTMSWP------VPGTLMIEPTESES----KAELDRFCDALISIREEIADIE 912 (993)
T ss_pred HHHHHHHcCcEEeeeccc------cCCEEEEEeeeeCC----HHHHHHHHHHHHHHHHHHHHHh
Confidence 888888999987421112 36789999999999 8999999999999998887764
No 168
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=6.2e-21 Score=195.08 Aligned_cols=286 Identities=13% Similarity=0.066 Sum_probs=189.7
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCC-CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeee
Q 010058 128 QKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 205 (519)
Q Consensus 128 ~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~ 205 (519)
++.+++++|++++ +|.+++|++ ++..++.+++.|| |+|++.++.++.+.. .....|..+..+++..
T Consensus 65 r~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~--------~~~~~g~~~~~v~~~~ 132 (364)
T PRK04781 65 RSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAV--------CARLQNAPLVEVPLVD 132 (364)
T ss_pred HHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH--------HHHHcCCEEEEEecCC
Confidence 3777788899874 699999998 7777888999999 789988865543321 1223455555565422
Q ss_pred CCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCCCC--CC
Q 010058 206 DESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSPFE--YA 279 (519)
Q Consensus 206 d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p~~--~~ 279 (519)
+.+++.+|++++.+.+...++++|+++ ++| +|...+.+++.++++. .++++|+|+++.. +.........+. .-
T Consensus 133 ~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~-f~~~~~~~~~~~~~~~ 211 (364)
T PRK04781 133 GADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGE-FSDVPSAVGLLARYDN 211 (364)
T ss_pred CccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchh-hcCCcchHHHHhhCCC
Confidence 223457899998766544489999988 777 8999998888888764 4789999999642 221100000001 12
Q ss_pred eEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 280 DVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 280 di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
-+++.|++|++ +|.|.||+++++ ++.+.+.+...+. + .+.....+...++.........+.
T Consensus 212 vi~~~SfSK~~gl~GlRvGy~v~~~--------------~l~~~l~~~~~~~--~-~~~~~~~~a~~~l~~~~~~~~~~~ 274 (364)
T PRK04781 212 LAVLRTLSKAHALAAARIGSLIANA--------------ELIAVLRRCQAPY--P-VPTPCAALAEQALSAPALAVTARR 274 (364)
T ss_pred EEEEecChhhcccccceeeeeeCCH--------------HHHHHHHhccCCC--C-CCHHHHHHHHHHHhcccHHHHHHH
Confidence 47788999975 699999999987 6666665543332 2 222222222234432111234556
Q ss_pred HHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccC
Q 010058 358 QEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTP 436 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~ 436 (519)
.+++.++++.+.+.|+++ |+..+.+ +.+.++|+.+. +..++.+.|.++||.++ |++..+..++++||++.
T Consensus 275 ~~~~~~~r~~l~~~L~~~~~~~~~~p-~~g~f~~~~~~----~~~~~~~~l~~~gI~v~----~~~~~~~~~~~~Ris~~ 345 (364)
T PRK04781 275 VAEVRAERERLHAALAQLPGVRRVYP-SQGNFLLVRFD----DAEAAFQALLAAGVVVR----DQRAAPRLSDALRITLG 345 (364)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeECC-CCCcEEEEEcC----CHHHHHHHHHHCCeEEe----eCCCCCCCCCeEEEeCC
Confidence 677889999999999988 6643333 33456677663 35678888989999997 44431223578999975
Q ss_pred ccccCCCCHHHHHHHHHHHHHHH
Q 010058 437 ALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 437 ~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+ ++++++++++|+++.
T Consensus 346 ---~----~~~~~~l~~al~~~~ 361 (364)
T PRK04781 346 ---T----PEQNDRVLAALQRTQ 361 (364)
T ss_pred ---C----HHHHHHHHHHHHHHH
Confidence 3 799999999998754
No 169
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=1e-20 Score=192.81 Aligned_cols=314 Identities=17% Similarity=0.145 Sum_probs=206.9
Q ss_pred CeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 78 GLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 78 ~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
.++|..++|+ +|+.+.+++.+.+.... +||.. ...+++ +.++++++++++ +|++|+|++ +
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~--~Y~~~-------~~~~lr----~~ia~~~~~~~~----~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDKLV--EYPDP-------DYLELR----KRIASFEQLDLE----NVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHhhh--cCCCc-------cHHHHH----HHHHHHhCCChh----hEEECCCHHHH
Confidence 4788888775 47889999988764321 33321 234555 677777898875 699999998 7
Q ss_pred HHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 155 NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 155 ~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
+..++.++ .+ |.|++.++.++.+.. .....|..+..+++ +. +++.+| +++.+.+.. ++++|+++
T Consensus 84 l~~~~~~~-~~-~~v~i~~P~y~~~~~--------~~~~~g~~~~~~~~--~~~~~~~~d-~~~~~~~~~-~~~~v~~~~ 149 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILAPTFAEYER--------ALKAFDAEIEYAEL--TEETNFAAN-EIVLEEIKE-EIDLVFLCN 149 (354)
T ss_pred HHHHHHHh-CC-CcEEEecCChHHHHH--------HHHHcCCeeEEEeC--ccccCCCcc-HHHHHhhcc-CCCEEEEeC
Confidence 77677765 44 688888876665533 22234555555543 42 346788 666666665 79998776
Q ss_pred ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C--CCeEEEEcCCCcc--cCCCcceEEee
Q 010058 233 ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSL--RGPRGAMIFFR 301 (519)
Q Consensus 233 ~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~--~~di~~~S~~K~l--~GprgG~i~~~ 301 (519)
|+| +|...+ +++|.++|+++++++|+|+++. .+...+....++ . .--+++.|++|++ +|.|.||++++
T Consensus 150 P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 150 PNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFM-DFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTS 228 (354)
T ss_pred CCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCccc-ccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecC
Confidence 777 887776 6677788899999999999853 332222111111 1 1247788999975 78999999885
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhH-HHHHHHHHHHHHHHHHHHHhc-CCEE
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEY-KAYQEQVLSNSSKFARSLLER-GYDL 379 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~ 379 (519)
++ .+.+.+.....+ .+.+.....+...++. ...+ ++.++.++++++.+.+.|++. |+.+
T Consensus 229 ~~-------------~~~~~~~~~~~~---~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 289 (354)
T PRK06358 229 NK-------------NLAEKLLQMREP---WSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKV 289 (354)
T ss_pred CH-------------HHHHHHHHhCCC---CcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 42 444444443222 2223333333333442 3333 777888899999999999987 7666
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
..+ ...++|+.+. +..++.+.|.+.||.+. |++. +...+++|||++. + .++++++.++|.++
T Consensus 290 ~~~--~g~f~~~~~~----~~~~~~~~l~~~gI~v~----~~~~f~~~~~~~iRls~~---~----~~~~~~l~~~l~~~ 352 (354)
T PRK06358 290 YKP--SVNFIFFKLE----KPIDLRKELLKKGILIR----SCSNYRGLDENYYRVAVK---S----REDNKKLLKALEVI 352 (354)
T ss_pred cCC--cceEEEEEcC----chHHHHHHHHHCCeEEE----ECCCCCCCCCCEEEEEeC---C----HHHHHHHHHHHHHH
Confidence 554 2346677653 24678888888999997 5554 2334578999954 3 79999999999876
Q ss_pred H
Q 010058 459 V 459 (519)
Q Consensus 459 l 459 (519)
+
T Consensus 353 ~ 353 (354)
T PRK06358 353 L 353 (354)
T ss_pred h
Confidence 5
No 170
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=8.8e-21 Score=198.08 Aligned_cols=346 Identities=13% Similarity=0.096 Sum_probs=220.1
Q ss_pred CeeecCCCCCC-cHHHHHHHhhHhhhc-cC-CC---CCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCcceEE
Q 010058 78 GLELIPSENFT-SVSVMQAVGSVMTNK-YS-EG---YPGARYYGGNEYIDMAESLCQKRALDAFQ----LDPAKWGVNVQ 147 (519)
Q Consensus 78 ~i~L~a~en~~-~~~V~ea~~~~l~~~-~~-~g---~p~~~~y~~~~~~~~le~~~~~~~~~~~g----~~~~~~~~~V~ 147 (519)
.|+|.-.||.+ ...+.+.+.+...-. +. .+ .....+|.+..+...++++..+.+.+.+| +++ .+|+
T Consensus 49 ~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p----~~Iv 124 (447)
T PLN02607 49 VIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDP----DRIV 124 (447)
T ss_pred eEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCH----HHeE
Confidence 58999899975 445555554432200 00 01 11224566677788899888888888877 355 3699
Q ss_pred eCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhh--
Q 010058 148 SLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAAL-- 223 (519)
Q Consensus 148 ~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~-- 223 (519)
+|+|++ |+..++.++++|||.|+++++.|+++..... ...|..+. +++.++ +++.+|++++++++++
T Consensus 125 it~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~-------~~~g~~vv--~v~~~~~~~f~~~~~~le~a~~~a~ 195 (447)
T PLN02607 125 LTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLR-------WRTGVKIV--PIHCDSSNNFQVTPQALEAAYQEAE 195 (447)
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-------hcCCcEEE--EEeCCCCCCCcCCHHHHHHHHHHHH
Confidence 999998 8888888899999999999987776643211 01243333 444443 3457999999998864
Q ss_pred ---hCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC-----------CCCCCeEEEE
Q 010058 224 ---FRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS-----------PFEYADVVTT 284 (519)
Q Consensus 224 ---~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~-----------p~~~~di~~~ 284 (519)
.++|+|+++ |+| +|..++ +++|.++|+++++++|+|+++...........+ ..+.--+++.
T Consensus 196 ~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~ 275 (447)
T PLN02607 196 AANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVY 275 (447)
T ss_pred HhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEE
Confidence 378888887 777 888776 667888899999999999986432111100000 0012235678
Q ss_pred cCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc--CHhHHHHHHH
Q 010058 285 TTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK--TPEYKAYQEQ 360 (519)
Q Consensus 285 S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~--~~~~~~~~~~ 360 (519)
|++|.+ +|.|.|++++.++ ++...+...... +.++.....+++..|..-. +..+...+++
T Consensus 276 s~SK~fg~~GlRvG~ivs~n~-------------~l~~~~~~~~~~---~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~ 339 (447)
T PLN02607 276 SLSKDLGLPGFRVGTIYSYND-------------KVVTTARRMSSF---TLVSSQTQHLLASMLSDEEFTENYIRTNRER 339 (447)
T ss_pred cchhcCCCCcceEEEEEEcCH-------------HHHHHHHHHhhc---CCCCHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 999975 7888899998542 444433322111 1222223333333333211 1122455677
Q ss_pred HHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC---C-Cc-HHHHH-HhhcccCeEEcccccCCCC-CCCCCCeEEe
Q 010058 361 VLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK---G-ID-GSRVE-KVLESVHIAANKNTVPGDV-SAMVPGGIRM 433 (519)
Q Consensus 361 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~---~-~~-~~~~~-~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi 433 (519)
+.++++.+.+.|++.|+++..+ ..+.++|++++.. . .+ ..++. ++++++||.+. ||.. ....++++||
T Consensus 340 l~~~~~~~~~~L~~~gi~~~~~-~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~----pG~~f~~~~~g~fRi 414 (447)
T PLN02607 340 LRKRYEMIVQGLRRAGIECLKG-NAGLFCWMNLSPLLETPTREGELALWDSILREVKLNIS----PGSSCHCSEPGWFRV 414 (447)
T ss_pred HHHHHHHHHHHHHhCCCCcccC-CeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEc----CccccCCCCCCEEEE
Confidence 7888899999999988876553 3457788887531 1 11 22444 45566899996 7665 3345789999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
++.... +++++..++.|.+++...
T Consensus 415 ~fa~~~-----~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 415 CFANMS-----EDTLEVALKRIHRFMDRR 438 (447)
T ss_pred EeccCC-----HHHHHHHHHHHHHHHHHH
Confidence 987532 588999999998888654
No 171
>PLN02672 methionine S-methyltransferase
Probab=99.89 E-value=1.3e-20 Score=209.13 Aligned_cols=335 Identities=12% Similarity=0.129 Sum_probs=216.5
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..++|+ +|+.+++++.+.+.. . .+ +++. ..+.+.+++++++.+|++.+.. .+|++++|++
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~-~--~~----s~g~----pdlr~aLa~~la~~~Gv~~d~~-e~IIvt~Gs~ 764 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVR-Q--NI----SESE----TDPRPSILQFIKSNYGFPTDSC-TEFVYGDTSL 764 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhh-c--CC----CCCC----hHHHHHHHHHHHHHhCcCCCCC-CEEEEeCCHH
Confidence 356899988885 688999999887654 2 11 1111 2345667799999999965310 2699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE-E
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV-A 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi-~ 231 (519)
++..++.++++|||.|+++++.++.+.. .+...|..+..+++.. .+++.+|++++++++++.+.++|+ +
T Consensus 765 elL~lll~aLl~pGD~VLVp~PtY~~Y~~--------~a~~~Ga~vv~Vpl~~-e~gf~lD~d~Le~al~~~~~~~I~L~ 835 (1082)
T PLN02672 765 ALFNKLVLCCVQEGGTLCFPAGSNGTYVS--------AAKFLKANFRRIPTKS-SDGFKLTAKTLASTLETVKKPWVYIS 835 (1082)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEEeccc-ccCCCCCHHHHHHHhccCCCCEEEEE
Confidence 6667889999999999999977666544 3445566666666431 246789999999998653334444 4
Q ss_pred ccc-c-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCC-------C-----CCeEEEEcCCCc--c
Q 010058 232 GAS-A-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPF-------E-----YADVVTTTTHKS--L 290 (519)
Q Consensus 232 ~~s-n-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~-------~-----~~di~~~S~~K~--l 290 (519)
+|+ | +|..++ +++|.++|++||++||+|+++. ++...+.. +.++ . ..-+++.|++|. +
T Consensus 836 nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYs-dL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~l 914 (1082)
T PLN02672 836 GPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFS-GLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLS 914 (1082)
T ss_pred CcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCC-ccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhcc
Confidence 576 7 887766 5677778899999999999964 22221110 0000 0 123667799985 4
Q ss_pred cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc--C----HhHHHHHHHHHHH
Q 010058 291 RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK--T----PEYKAYQEQVLSN 364 (519)
Q Consensus 291 ~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~--~----~~~~~~~~~~~~~ 364 (519)
+|+|.||++++++ ++.+.+.... .. ..++.....+..+++.... . ...++.++.++++
T Consensus 915 pGLRIGylIap~~-------------eLi~~l~~~~--~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~r 978 (1082)
T PLN02672 915 GGHEFGFLALNDS-------------VLIDAFHSAP--GL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSR 978 (1082)
T ss_pred HHHHheeEEeCCH-------------HHHHHHHHhh--hh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH
Confidence 7899999999763 3555554321 11 1222112222222222111 1 1245667778999
Q ss_pred HHHHHHHHHhcCCEEecCCCCcceeeeeccC----------C------CCcHHHHHHhh-cccCeEEcccccCCCCCCCC
Q 010058 365 SSKFARSLLERGYDLVSGGTENHLVLVNLRN----------K------GIDGSRVEKVL-ESVHIAANKNTVPGDVSAMV 427 (519)
Q Consensus 365 ~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~----------~------~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~ 427 (519)
++++.+.|.+.|+.+..+ ..+.+.|+++.. . +.+..++.+.| ++.||.++ ||... ..
T Consensus 979 Rd~L~e~L~~~Gi~v~~P-eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~----PGs~F-G~ 1052 (1082)
T PLN02672 979 AERLKETLEACGWDVLEP-QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCIN----SSSWT-GI 1052 (1082)
T ss_pred HHHHHHHHHHCCCeEecC-CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEe----cCccc-CC
Confidence 999999999999887654 345566665421 0 24566777655 45799997 66431 12
Q ss_pred CCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 428 PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 428 ~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++++||++.. + ++++++.++.|.+...
T Consensus 1053 ~g~~RIsfa~--~----~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1053 PGYCRFSFAL--E----DSEFDRALKAIARFKE 1079 (1082)
T ss_pred CCeEEEEecC--C----HHHHHHHHHHHHHHHH
Confidence 5789999763 4 6789998888887554
No 172
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.88 E-value=2.1e-20 Score=193.91 Aligned_cols=341 Identities=13% Similarity=0.122 Sum_probs=204.2
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.++|..+++. +++.|.+++.+.+.+...+ .....|+...+...+++++.+++.+ .+++++ +|++|+|++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~Y~p~~g~~~lr~aia~~~~~-~~~~~d----~I~it~Ga~ 105 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASE--ETFRGYGPEQGYPFLREAIAENDYR-GRIDPE----EIFISDGAK 105 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHHHHHHHHHHh-cCCCHH----HEEECCCcH
Confidence 356888888775 5788999998887652110 1112244445566777555554322 156664 699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee---------eeEEEeeeeCC-CCCCCCHHHHHHHhh
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI---------FFETMPYRLDE-STGYIDYEQLEKSAA 222 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~---------~~~~v~~~~d~-~~~~iD~d~l~~~i~ 222 (519)
++.. +..++.|||+|+++++.+.++.... ...|. +...++++.++ +++..|++.
T Consensus 106 ~al~~-l~~l~~~gd~Vlv~~P~y~~~~~~~--------~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------ 170 (402)
T TIGR03542 106 CDVFR-LQSLFGSDNTVAVQDPVYPAYVDSN--------VMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------ 170 (402)
T ss_pred HHHHH-HHHhcCCCCEEEEeCCCCcchHHHH--------HHcCCccccccccccceEEEeecchhhCCCCCccc------
Confidence 6664 5677899999999998776664322 22233 00233333432 234455422
Q ss_pred hhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C---CCeEEEEcCCCcc-
Q 010058 223 LFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E---YADVVTTTTHKSL- 290 (519)
Q Consensus 223 ~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~---~~di~~~S~~K~l- 290 (519)
..++++|+++ ++| +|..++ +++|.++|+++|+++|+|+++.. +...+..+.++ . ...+++.|++|.+
T Consensus 171 ~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g 249 (402)
T TIGR03542 171 EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSA-FISDPSLPHSIFEIPGAKECAIEFRSFSKTAG 249 (402)
T ss_pred cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhh-hccCCCCCcchhhCCCCcccEEEEecCccccC
Confidence 1378999888 777 887777 67888889999999999999653 22222111111 1 1346688999976
Q ss_pred -cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Q 010058 291 -RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369 (519)
Q Consensus 291 -~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~ 369 (519)
+|.|.||+++++++..... ....+.+....... ..+++.....++..++.......+.+.++.+.++++.+.
T Consensus 250 ~pGlRiG~~i~~~~l~~~~~------~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 322 (402)
T TIGR03542 250 FTGVRLGWTVVPKELTYADG------HSVIQDWERRQCTK-FNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILR 322 (402)
T ss_pred CCCcceEEEEecHHHhhcch------hhHHHHHHHHhhhc-ccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHH
Confidence 7888899999873100000 00012221111111 112333333333333332111234556677889999999
Q ss_pred HHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHH
Q 010058 370 RSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEED 447 (519)
Q Consensus 370 ~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~d 447 (519)
+.|++.|+.+..+ ..+.++|+.+.. +++..++.+.| ++.||.+. ||+. +....+++||++.. + +++
T Consensus 323 ~~L~~~~~~~~~~-~~~~f~~v~l~~-~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~~--~----~~~ 390 (402)
T TIGR03542 323 KALEAAGFKVYGG-EHAPYLWVKTPE-GISSWDFFDFLLYQYHVVGT----PGSGFGPSGEGFVRFSAFG--K----REN 390 (402)
T ss_pred HHHHhcCceecCC-CceeEEEEECCC-CCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEecC--C----HHH
Confidence 9999888776543 345677887643 45666666655 57899996 5554 33335789999532 3 688
Q ss_pred HHHHHHHHHHH
Q 010058 448 FEKVAEFFDAA 458 (519)
Q Consensus 448 i~~l~~~l~~~ 458 (519)
++..++.|+++
T Consensus 391 l~~~l~~l~~~ 401 (402)
T TIGR03542 391 IVEACERIKEA 401 (402)
T ss_pred HHHHHHHHHhh
Confidence 88888887654
No 173
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=5.5e-21 Score=194.92 Aligned_cols=310 Identities=15% Similarity=0.135 Sum_probs=200.5
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
..+.|..+||+.++.- .+ .+.. . ..||. .. ..+++ +.+++++|++++ +|.+++|++ ++
T Consensus 32 ~~~~l~~ne~~~~~~~--~~--~~~~-~-~~Yp~------~~-~~~Lr----~aia~~~~~~~~----~I~it~Gs~~~i 90 (354)
T PRK04635 32 GDIWINANESPFNNEY--KL--DLAR-L-NRYPE------CQ-PPELI----NAYSAYAGVAPE----QILTSRGADEAI 90 (354)
T ss_pred CcEEeeCCCCCCCCCh--hh--hhHH-h-ccCCC------CC-HHHHH----HHHHHHhCcCHH----HEEEeCCHHHHH
Confidence 3488999999753321 11 1111 1 12332 22 34555 677778899885 699999998 88
Q ss_pred HHHHHhhcCCC-CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-c
Q 010058 156 FQVYTALLKPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-A 233 (519)
Q Consensus 156 ~~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~ 233 (519)
..++.++++|| |+|+++++.+..+.. .....|..+..+++ + +++.+|.+.++. + + ++|+|+++ +
T Consensus 91 ~~~~~~~~~~g~d~vlv~~P~y~~y~~--------~~~~~g~~v~~v~~--~-~~~~~~~~~l~~-~-~-~~~li~i~nP 156 (354)
T PRK04635 91 ELLIRAFCEPGQDSIACFGPTYGMYAI--------SAETFNVGVKALPL--T-ADYQLPLDYIEQ-L-D-GAKLVFICNP 156 (354)
T ss_pred HHHHHHhcCCCCCeEEEcCCChHHHHH--------HHHHcCCEEEEEec--C-CCCCCCHHHHHh-c-c-CCCEEEEeCC
Confidence 87888999999 899998866554322 22334655555554 4 347889998873 3 3 89999988 7
Q ss_pred cc-ccccccHHHHHHHHhhc-CCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeecccccc
Q 010058 234 SA-YARLYDYARIRKVCDKQ-KAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 307 (519)
Q Consensus 234 sn-~g~~~d~~~i~~ia~~~-~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~~~~~~ 307 (519)
+| +|...+.+++.++++.. +++||+|+++..- ........... .--+++.|+||++ +|.|.||+++++
T Consensus 157 ~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~-~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~----- 230 (354)
T PRK04635 157 NNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEF-CPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANE----- 230 (354)
T ss_pred CCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhh-ccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCH-----
Confidence 77 89999999999998764 6999999997432 11100000000 1236788999985 688889999987
Q ss_pred cccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCc
Q 010058 308 NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG-YDLVSGGTEN 386 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 386 (519)
++.+.+.....+. +.+.....+...++........++..+++.++++.+.+.|++.+ +.+..+ ..
T Consensus 231 ---------~~~~~l~~~~~~~---~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g 296 (354)
T PRK04635 231 ---------ELIEILMRVIAPY---PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG--NG 296 (354)
T ss_pred ---------HHHHHHHhhcCCC---CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC--CC
Confidence 5666555432222 22222222223333321112245566778888999999999985 766543 23
Q ss_pred ceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 387 HLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 387 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
.++|+.+. +..++.+.|.++||.++.. .. ...++++||++. + ++|+++++++|++
T Consensus 297 ~f~~~~~~----~~~~~~~~l~~~gv~v~~~----~~-~~~~~~lRis~~---~----~e~~~~l~~al~~ 351 (354)
T PRK04635 297 NYVLAKFD----DVDAVFKALWDAGIVARAY----KD-PRLANCIRFSFS---N----RAETDKLIGLIRN 351 (354)
T ss_pred cEEEEECC----CHHHHHHHHHHCCEEEEEC----CC-CCCCCeEEEEeC---C----HHHHHHHHHHHHH
Confidence 46666653 4667888888999999732 21 123568999964 4 7999999999865
No 174
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.88 E-value=3.6e-20 Score=188.29 Aligned_cols=315 Identities=16% Similarity=0.210 Sum_probs=212.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceee
Q 010058 114 YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA 193 (519)
Q Consensus 114 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~ 193 (519)
|++...+.++| +.+++++|.++ -|.++||+.|+..++...++|||+| +...+-..... .+..
T Consensus 74 Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~a-------hI~~ 135 (460)
T PRK13237 74 YAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRY-------HQEL 135 (460)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHH-------HHHh
Confidence 56667778888 88889999987 3888899998886655558999976 33222111100 1222
Q ss_pred eeeeeEEEe-------eeeCCCCCCCCHHHHHHHhhhhC---CcEEEEc-ccc-c-cccc---cHHHHHHHHhhcCCEEE
Q 010058 194 VSIFFETMP-------YRLDESTGYIDYEQLEKSAALFR---PKLIVAG-ASA-Y-ARLY---DYARIRKVCDKQKAVML 257 (519)
Q Consensus 194 ~g~~~~~v~-------~~~d~~~~~iD~d~l~~~i~~~k---~klIi~~-~sn-~-g~~~---d~~~i~~ia~~~~~~li 257 (519)
.|..+.-+. -..++.++.+|+++|++++++.. +++|.+. .+| + |... ++++|.++|++||+.||
T Consensus 136 ~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi 215 (460)
T PRK13237 136 NGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVF 215 (460)
T ss_pred CCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEE
Confidence 233221111 01235678999999999998632 2233333 445 5 4444 78999999999999999
Q ss_pred ehhhhhhh---cc---ccCCCCCC--------CCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhh
Q 010058 258 ADMAHISG---LV---AAGVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKIN 323 (519)
Q Consensus 258 vD~ah~~g---~~---~~~~~~~p--------~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~ 323 (519)
.|+||+.| ++ ..+....+ +.++|.+++|+||.+.++.||+|+++++ ++.++++
T Consensus 216 ~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~-------------eL~~~~r 282 (460)
T PRK13237 216 FDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE-------------ELFDEAK 282 (460)
T ss_pred EECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH-------------HHHHHHH
Confidence 99999988 33 12222223 2379999999999999999999999986 7777776
Q ss_pred hc--ccCCCC--CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccC----
Q 010058 324 QA--VFPGLQ--GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRN---- 395 (519)
Q Consensus 324 ~~--~~~~~~--g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~---- 395 (519)
.. .+++.. |+...--+.|++.++.+..+. .|.++...+.++|.+.|.+.|++++.+ +..|-+++|...
T Consensus 283 ~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~Gvpv~~p-~ggH~v~vda~~~lph 358 (460)
T PRK13237 283 ELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAAGVPIVEP-VGGHAVFLDARRFLPH 358 (460)
T ss_pred HhccccCCCcCCCChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHCCCceecC-CCceEEEEEhHHhCCC
Confidence 65 445543 444445788899998876653 778888999999999999999999976 456888887532
Q ss_pred ---CCCcHHHHHHhh-cccCeEEcc-ccc-----CCCCCCCC--CCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHh
Q 010058 396 ---KGIDGSRVEKVL-ESVHIAANK-NTV-----PGDVSAMV--PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLAL 463 (519)
Q Consensus 396 ---~~~~~~~~~~~L-~~~gI~v~~-~~~-----p~~~~~~~--~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~ 463 (519)
....+..+...| .+.||..-- .++ |....... -.-+|+..+- |=.+.+.|+.+++.|..+.++..
T Consensus 359 ~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr---r~yt~~h~~~v~~~~~~~~~~~~ 435 (460)
T PRK13237 359 LPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPR---RVYTYAHMDVVADSVIKLYKHRE 435 (460)
T ss_pred CCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeecccc---ccccHHHHHHHHHHHHHHHHhHh
Confidence 134455555555 457775421 111 11111111 2468998764 33457999999999999998876
Q ss_pred hhc
Q 010058 464 KIK 466 (519)
Q Consensus 464 ~~~ 466 (519)
.++
T Consensus 436 ~~~ 438 (460)
T PRK13237 436 DIR 438 (460)
T ss_pred hcC
Confidence 654
No 175
>PRK05839 hypothetical protein; Provisional
Probab=99.88 E-value=3.5e-20 Score=190.28 Aligned_cols=320 Identities=16% Similarity=0.089 Sum_probs=203.2
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCcH
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sGs 152 (519)
+.++|..+++. +++.+.+++.+.... . ..|+...+..+++++.++++++.+|. ++ .+|++|+|+
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~-~-------~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~----~~I~it~G~ 92 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHL-L-------NKYPKSAGEESLREAQRGFFKRRFKIELKE----NELIPTFGT 92 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhc-c-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCc----ceEEEecCc
Confidence 56888877774 567788887765422 1 23444456677888888888888885 55 479999999
Q ss_pred H-HHHHHHHhhc--CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcE
Q 010058 153 P-ANFQVYTALL--KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKL 228 (519)
Q Consensus 153 ~-a~~~~~~all--~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~kl 228 (519)
+ +...++.+++ ++||.|+++++.+..+.. .+...|..+..++ .+. +++.+|.++.+ + + ++|+
T Consensus 93 ~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~v~~v~--~~~~~~~~~d~~~~~--~-~-~~k~ 158 (374)
T PRK05839 93 REVLFNFPQFVLFDKQNPTIAYPNPFYQIYEG--------AAIASRAKVLLMP--LTKENDFTPSLNEKE--L-Q-EVDL 158 (374)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCchhhHH--------HHHhcCCEEEEee--cccccCCcCCcchhh--h-c-cccE
Confidence 8 7766667764 589999999866655543 2334455555554 442 34666665432 2 3 6899
Q ss_pred EEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---------C-CCeEEEEcCCCc--cc
Q 010058 229 IVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---------E-YADVVTTTTHKS--LR 291 (519)
Q Consensus 229 Ii~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---------~-~~di~~~S~~K~--l~ 291 (519)
|+++ ++| +|...+ +++|.++|+++|+++|+|+++.. +...+..++.+ . .--+++.|++|. ++
T Consensus 159 v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~-~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 237 (374)
T PRK05839 159 VILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSE-IYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAP 237 (374)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhh-cccCCCCCCHhhhhcccCccccCcEEEEeccccccCCc
Confidence 9988 777 887766 45666778899999999998653 22111111100 0 124778899996 58
Q ss_pred CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHH
Q 010058 292 GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371 (519)
Q Consensus 292 GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (519)
|.|.||+++++ ++.+.+.........+.+...+ .++..++. .....++.++++.++++.+.+.
T Consensus 238 GlRiG~ii~~~--------------~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~ 300 (374)
T PRK05839 238 GLRSGFIAGDA--------------SILKKYKAYRTYLGCASPLPLQ-KAAAVAWL--DDEHAEFFRNIYAKNLKLAREI 300 (374)
T ss_pred cceeEEEecCH--------------HHHHHHHHHHhhcCCCCChHHH-HHHHHHhc--cchHHHHHHHHHHHHHHHHHHh
Confidence 99999999987 5555444332111112223322 33333332 2334577788888888887776
Q ss_pred HHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-C--CCCCCeEEeccCccccCCCCHHH
Q 010058 372 LLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-S--AMVPGGIRMGTPALTSRGFVEED 447 (519)
Q Consensus 372 L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~--~~~~~~iRi~~~~~ttrg~~~~d 447 (519)
| |+. .+..+.++|+.+. +..++.+.| +++||.+. ||.. + ...++++||++.. + +++
T Consensus 301 l---~~~---~p~gg~fi~~~~~----~~~~~~~~l~~~~gi~v~----pg~~f~~~~~~~~~iRis~~~--~----~~~ 360 (374)
T PRK05839 301 L---GIT---IPPATFYVWLPVD----NDEEFTKKLYQNEGIKVL----PGSFLGRNGIGKGYVRIALVY--D----TPK 360 (374)
T ss_pred c---CCC---CCCeeEEEEEeCC----ChHHHHHHHHHHCCEEEe----CchhhCCCCCCCCeEEEEecC--C----HHH
Confidence 5 433 2234566777764 245666666 46999997 5543 1 1235899999852 3 688
Q ss_pred HHHHHHHHHHHHH
Q 010058 448 FEKVAEFFDAAVK 460 (519)
Q Consensus 448 i~~l~~~l~~~l~ 460 (519)
+.+.++.|.+++.
T Consensus 361 ~~~~l~~l~~~l~ 373 (374)
T PRK05839 361 LEKALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHHHHhh
Confidence 9888888887764
No 176
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.88 E-value=2.8e-20 Score=190.14 Aligned_cols=316 Identities=13% Similarity=0.112 Sum_probs=208.3
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.++|..++|+ +|+.+.+++.+.+... .+||.. . ...++ +.++++++++++ +|++++|++
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~~--~~Y~~~------~-~~~Lr----~aia~~~~v~~~----~I~it~G~~~ 85 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSAL--RHYPDP------D-YRELR----LALAQHHQLPPE----WILPGNGAAE 85 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHHh--hcCCCc------C-HHHHH----HHHHHHhCcChh----hEEECCCHHH
Confidence 45889888885 5788999988766541 134322 2 23555 556666788874 699999998
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCC----CCCHHHHHHHhhhhCCcEE
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG----YIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~----~iD~d~l~~~i~~~k~klI 229 (519)
++..++.++ .+||.|++.++.+..+.. .+...|..+..+++ +++++ ..|++++++.. . +++++
T Consensus 86 ~i~~~~~~l-~~g~~vlv~~P~y~~~~~--------~~~~~g~~~~~v~~--~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 152 (360)
T PRK07392 86 LLTWAGREL-AQLRAVYLITPAFGDYRR--------ALRAFGATVKELPL--PLDQPSPGLTLRLQTLPPQL-T-PNDGL 152 (360)
T ss_pred HHHHHHHHh-CCCCeEEEECCCcHHHHH--------HHHHcCCeEEEEec--ccccCCcccccCHHHHHHhc-c-CCCEE
Confidence 777677765 578999999977666543 33345665555554 33332 35677776543 2 67888
Q ss_pred EEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C--CCeEEEEcCCCcc--cCCCcceEEe
Q 010058 230 VAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSL--RGPRGAMIFF 300 (519)
Q Consensus 230 i~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~--~~di~~~S~~K~l--~GprgG~i~~ 300 (519)
+++ ++| +|..++.++|.++|+++++ +|+|+++. .+...+..++.+ . .--+++.|++|++ +|.|.||+++
T Consensus 153 ~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~-~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~ 230 (360)
T PRK07392 153 LLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFM-DFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA 230 (360)
T ss_pred EEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchh-hhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC
Confidence 887 777 8999999999999999985 66699854 332222111111 1 1247788999975 7899999999
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhH-HHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEY-KAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
++ ++.+.+.....+ .+.+.....++..+++ ...+ +...+.++++++.+.+.|+++ |+.
T Consensus 231 ~~--------------~~~~~~~~~~~~---~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~ 290 (360)
T PRK07392 231 HP--------------DRLQRWQQWRDP---WPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLT 290 (360)
T ss_pred CH--------------HHHHHHHhhCCC---CCCCHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 87 555555443322 2334444444444553 2334 455667888899999999887 777
Q ss_pred EecCCCCcceeeeeccCCCCcHHHHHHh-hcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 379 LVSGGTENHLVLVNLRNKGIDGSRVEKV-LESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
+.. +...+.|+.+.. +..++... |+++||.+. ||.. +...++++||++.. .++++++.+.|.
T Consensus 291 ~~~--~~~~fl~~~~~~---~~~~l~~~ll~~~gv~v~----pg~~f~~~~~~~iRi~~~~-------~~~~~~l~~al~ 354 (360)
T PRK07392 291 PLP--SAANFLLVQSQG---SALQLQEKLLQQHRILIR----DCLSFPELGDRYFRVAVRT-------EAENQRLLEALA 354 (360)
T ss_pred ECC--CCCCEEEEEcCC---CHHHHHHHHHhhCCEEEE----eCCCCCCCCCCEEEEEeCC-------HHHHHHHHHHHH
Confidence 654 334566666532 45666655 577899997 5554 23345799999653 567889999888
Q ss_pred HHHH
Q 010058 457 AAVK 460 (519)
Q Consensus 457 ~~l~ 460 (519)
+++.
T Consensus 355 ~~~~ 358 (360)
T PRK07392 355 AILA 358 (360)
T ss_pred HHhh
Confidence 8765
No 177
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.88 E-value=8.5e-21 Score=198.77 Aligned_cols=349 Identities=15% Similarity=0.165 Sum_probs=203.3
Q ss_pred CeeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CC-CCCcceEEeCCcHH
Q 010058 78 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DP-AKWGVNVQSLSGSP 153 (519)
Q Consensus 78 ~i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~-~~~~~~V~~~sGs~ 153 (519)
.|+|..++. +.++..+.++.+.+... .||.. .......++.+.+++.+.++. .+ ++ .+|++|+|++
T Consensus 96 ~i~l~~g~p~~~~~~~~~~~~~~~~~~---~Y~~p-----~g~~~~~e~iv~~y~~~~~~~~~~~~~~--~~V~it~Gat 165 (521)
T TIGR03801 96 IISYVIDQLGFDPDAFLYEMCDGIIGD---NYPVP-----DRMLPHSEKIVHQYLIQEMCGNKPPPGE--FDLFAVEGGT 165 (521)
T ss_pred HHhhcCCCCCCCCCHHHHHHHHHhhcC---CCCCC-----CCCHHHHHHHHHHHHHhhccCCCCCCCc--CeEEEeCCHH
Confidence 466665554 33444445555443221 23221 123445555565676665543 22 21 1799999998
Q ss_pred -HHHHHHHh-----hcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-C-----CCCCHHHHHHHh
Q 010058 154 -ANFQVYTA-----LLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-T-----GYIDYEQLEKSA 221 (519)
Q Consensus 154 -a~~~~~~a-----ll~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~-----~~iD~d~l~~~i 221 (519)
|+..++.+ +++|||+|+++++.+..+.. .+.+.|...+.++++.+++ + +.+|.+++++++
T Consensus 166 ~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~--------~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~ 237 (521)
T TIGR03801 166 AAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE--------IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLR 237 (521)
T ss_pred HHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH--------HHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhc
Confidence 77767766 78999999999976665543 2223333334444444321 1 789999999887
Q ss_pred hhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCC---CCCCeEEEEcCCCcc-
Q 010058 222 ALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSP---FEYADVVTTTTHKSL- 290 (519)
Q Consensus 222 ~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p---~~~~di~~~S~~K~l- 290 (519)
++ ++|+|+++ |+| +|...+ +++|.++|++| +++||+|+++.. +.. .. .+. .+.-.+++.|++|++
T Consensus 238 ~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~-f~~-~~-~sl~~~~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 238 DP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGT-FVD-DF-RSLFAELPYNTIGVYSFSKYFG 313 (521)
T ss_pred CC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchh-hcc-cc-cchhhhCCCCEEEEEcchhhcc
Confidence 76 89999987 888 887777 66777789886 999999998642 221 11 111 113458888999975
Q ss_pred -cCCCcceEEeecccc---cc---c--c-------cC----cchhhhHHHHhh---hcccC-CCC--CCccHHHHH--HH
Q 010058 291 -RGPRGAMIFFRKGVK---EI---N--K-------QG----QEVMYAYEDKIN---QAVFP-GLQ--GGPHNHTIS--GL 342 (519)
Q Consensus 291 -~GprgG~i~~~~~~~---~~---~--~-------~g----~~~~~~~~~~i~---~~~~~-~~~--g~~~~~~ia--al 342 (519)
+|+|.|+++++++.. +. | . .. ......+++++- ..+.. ... ++|...+++ ++
T Consensus 314 ~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~ 393 (521)
T TIGR03801 314 ATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSL 393 (521)
T ss_pred CchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH
Confidence 799999999986410 00 0 0 00 000001111110 00111 111 233333223 33
Q ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec-CCCCcceeeeeccCCC---------------CcHHH-HHH
Q 010058 343 AVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS-GGTENHLVLVNLRNKG---------------IDGSR-VEK 405 (519)
Q Consensus 343 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~v~~~~~~---------------~~~~~-~~~ 405 (519)
.++++. .....++.++.++++++.+.+.| |+.+.. ++...+++++++...+ .+..+ +.+
T Consensus 394 ~all~~-~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~ 469 (521)
T TIGR03801 394 FALMDK-ENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFR 469 (521)
T ss_pred HHHhcc-chhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHH
Confidence 333332 12234677778888888888887 554322 2334577788875321 12334 445
Q ss_pred hhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 406 VLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 406 ~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
++++.||.+. ||.. +. ..+++|+++...+ ++++.++.+.|.+++...
T Consensus 470 L~~e~gV~v~----PG~~Fg~-~~~~vRisla~l~-----~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 470 LAEETGIVLL----PGGGFGG-PEWSVRVSLANLN-----EYDYAEIGRAIRKILDEY 517 (521)
T ss_pred HHHhCCEEEe----CchhcCC-CCCeEEEEecCCC-----HHHHHHHHHHHHHHHHHH
Confidence 6678999984 7776 32 2567999985433 689999999999888644
No 178
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.88 E-value=3.8e-20 Score=192.50 Aligned_cols=359 Identities=15% Similarity=0.196 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHhcccCeeecCCCCC-------CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc
Q 010058 63 EIADIIELEKARQWKGLELIPSENF-------TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAF 135 (519)
Q Consensus 63 ~~~~~~~~e~~~~~~~i~L~a~en~-------~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~ 135 (519)
.++....++..-....+.|..++.. .++.-.+++.+.+.. +. ..+ | ....++| +.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~----~~---~~~-G-~~~~~fe----~~lA~~~ 76 (438)
T PRK15407 10 QILELVREYAELAHAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLD----FW---LTT-G-RFNDAFE----KKLAEFL 76 (438)
T ss_pred HHHHHHHHHHHHhcccccccCCCCCCCcCccCCCHHHHHHHHHHHHh----Cc---ccC-C-hhHHHHH----HHHHHHh
Confidence 4455555554444334445555552 233444555554443 11 111 2 3456666 8888899
Q ss_pred CCCCCCCcceEEeCCcHHHHHHHHHhh---------cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC
Q 010058 136 QLDPAKWGVNVQSLSGSPANFQVYTAL---------LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD 206 (519)
Q Consensus 136 g~~~~~~~~~V~~~sGs~a~~~~~~al---------l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d 206 (519)
|.+. .+.++||+.++..++.++ ++|||+|++++++|.+..... ...|..+ +.++++
T Consensus 77 g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v--------~~~G~~p--v~vdvd 141 (438)
T PRK15407 77 GVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPI--------IQNGLVP--VFVDVE 141 (438)
T ss_pred CCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHH--------HHcCCEE--EEEecC
Confidence 9864 367777888888777765 589999999998887665432 2334433 444566
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcC
Q 010058 207 ESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTT 286 (519)
Q Consensus 207 ~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~ 286 (519)
++++.+|++++++.+++ ++++|++++. +|...|+++|.++|+++|++||+|++|+.|....+.....+ .|+.++|+
T Consensus 142 ~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~--gd~~~fSf 217 (438)
T PRK15407 142 LPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF--GDIATLSF 217 (438)
T ss_pred CCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeecc--CceEEEeC
Confidence 66789999999999987 8999988743 57778999999999999999999999999988766433222 36666665
Q ss_pred C--CcccCCCcceEEeecccc---ccc--ccCcch--hhh--------HHHH---hh---hcccCC-CCC-CccHHHHHH
Q 010058 287 H--KSLRGPRGAMIFFRKGVK---EIN--KQGQEV--MYA--------YEDK---IN---QAVFPG-LQG-GPHNHTISG 341 (519)
Q Consensus 287 ~--K~l~GprgG~i~~~~~~~---~~~--~~g~~~--~~~--------~~~~---i~---~~~~~~-~~g-~~~~~~iaa 341 (519)
| |.+.+..||+++++++.. ... ..|... ... .... +. ...+.. ..| +..+..+
T Consensus 218 ~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel-- 295 (438)
T PRK15407 218 YPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDM-- 295 (438)
T ss_pred CCCCCccccCceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHH--
Confidence 5 667766689999998521 111 111100 000 0000 00 000000 001 1112222
Q ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEec---CCCC-c-ceeeeeccC-CCCcHHHHHHhhcccCeEE
Q 010058 342 LAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVS---GGTE-N-HLVLVNLRN-KGIDGSRVEKVLESVHIAA 414 (519)
Q Consensus 342 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~~~~-~-~~~~v~~~~-~~~~~~~~~~~L~~~gI~v 414 (519)
.+|+...+...+++..++.+++++++.+.|.+. +...+. ++.. + +.+.+.+.. .+.+.+++.+.|.+.||.+
T Consensus 296 -~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~~~GI~~ 374 (438)
T PRK15407 296 -QAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLEENKIGT 374 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCc
Confidence 223333333457888999999999999999876 322222 1211 1 223333322 2456788999999999988
Q ss_pred ccccc-CCCCCCC------------------CCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 415 NKNTV-PGDVSAM------------------VPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 415 ~~~~~-p~~~~~~------------------~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+..+. |.+..+. ....|-+-.+ -+|+++|++++++.|++++.
T Consensus 375 ~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~----~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 375 RLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVY----PGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred cccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCC----CCCCHHHHHHHHHHHHHHHh
Confidence 75432 2221110 0111222221 24669999999999998874
No 179
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.2e-19 Score=174.35 Aligned_cols=345 Identities=17% Similarity=0.089 Sum_probs=223.0
Q ss_pred cCeeecCCCC------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEe
Q 010058 77 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQS 148 (519)
Q Consensus 77 ~~i~L~a~en------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~ 148 (519)
..|.|..+++ .+++.+.+|+...+......|| +...++...+++..+++.+-... ++ ..|..
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Y------aps~G~~~AR~AVAeYl~~~l~~kl~a----~DV~l 131 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGY------APSVGILPARRAVAEYLNRDLPNKLTA----DDVVL 131 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCc------CCccccHHHHHHHHHHhhcCCCCccCc----CceEE
Confidence 4567776554 3588999999998876543344 33344444443333332222221 23 35999
Q ss_pred CCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCc
Q 010058 149 LSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPK 227 (519)
Q Consensus 149 ~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~k 227 (519)
|+|.+ |+..++.+|.+||-.|+++. |||..+.......|..++...+ +...+|.||++.+|.++.+ +|.
T Consensus 132 tsGC~qAIe~~i~~LA~p~aNILlPr--------PGfp~Y~~~a~~~~lEVR~ydl-LPe~~weIDL~~veal~DE-NT~ 201 (447)
T KOG0259|consen 132 TSGCSQAIELAISSLANPGANILLPR--------PGFPLYDTRAIYSGLEVRYYDL-LPEKDWEIDLDGVEALADE-NTV 201 (447)
T ss_pred eccchHHHHHHHHHhcCCCCceecCC--------CCCchHHHhhhhcCceeEeecc-cCcccceechHHHHHhhcc-Cee
Confidence 99987 99999999999999999888 5554444334445555554443 3335789999999999998 888
Q ss_pred EEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC----CC-eEEEEcCCCc-c-cCCCc
Q 010058 228 LIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE----YA-DVVTTTTHKS-L-RGPRG 295 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~----~~-di~~~S~~K~-l-~Gprg 295 (519)
+|++. |+| .|..++ +++|+++|+++++++|.|+.+- -.+..+..--|++ -+ -+..++-+|. + +|||.
T Consensus 202 AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~-~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRl 280 (447)
T KOG0259|consen 202 AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYG-HTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRL 280 (447)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcc-eeecCCCCccchhhccccCceEeecccccccccCCcee
Confidence 77776 777 787665 6788999999999999999732 2222222212222 22 3445677884 3 89999
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
|||+.++..- ..+.+ ...+.+.. +-....+|.....+|+-.-|....++-|+....-++.|++...+.|++.
T Consensus 281 GWi~~hD~~g---vf~~~---~~~q~~~~--~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~I 352 (447)
T KOG0259|consen 281 GWIALHDPRG---VFRDT---KVVQGIKN--FLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDI 352 (447)
T ss_pred eeEEEecccc---cccch---HHHHHHHH--HHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcC
Confidence 9999998421 00111 11111111 2223357788888888887877666667888999999999999999998
Q ss_pred -CCEEecCCCCcceeeeeccCC-----CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHH
Q 010058 376 -GYDLVSGGTENHLVLVNLRNK-----GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 376 -g~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
++.....+....+.++.+.-. +-|-+...++.++..+.+ +||..- ..++++|+++.. .++.++
T Consensus 353 P~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~----LPG~af-~~~nw~Ri~i~~------~~~~le 421 (447)
T KOG0259|consen 353 PCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVIC----LPGQAF-GLKNWLRIVITV------EEEMLE 421 (447)
T ss_pred CCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEE----eccccc-cCCCeEEEEEcc------ChHHHH
Confidence 776333223344555544221 223334455557788888 588761 236899998543 256788
Q ss_pred HHHHHHHHHHHH
Q 010058 450 KVAEFFDAAVKL 461 (519)
Q Consensus 450 ~l~~~l~~~l~~ 461 (519)
+..+.|++...+
T Consensus 422 ea~~Rik~Fc~R 433 (447)
T KOG0259|consen 422 EAFSRIKEFCDR 433 (447)
T ss_pred HHHHHHHHHHHh
Confidence 888888776654
No 180
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.87 E-value=9.1e-20 Score=190.10 Aligned_cols=344 Identities=12% Similarity=0.064 Sum_probs=209.4
Q ss_pred ccCeeecCCCCCC----cHHHHHHHhhHhhhccCCCC-CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 010058 76 WKGLELIPSENFT----SVSVMQAVGSVMTNKYSEGY-PGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~en~~----~~~V~ea~~~~l~~~~~~g~-p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s 150 (519)
.+.|+|..+.+.. .+.+.+++.+.+... .+ +.-..|+...+..++++.+.+++.+.+|.+.+. .+|++|+
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~--~~I~it~ 104 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASG---KLTEALGNYDGPQGKDELIEALAALLNERYGWNISP--QNIALTN 104 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCc---ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh--hhEEEcc
Confidence 4568887665421 235566666655431 01 111235555666788888889998887764322 4799999
Q ss_pred cHH-HHHHHHHhhcC-----CCCEEEE-ecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh
Q 010058 151 GSP-ANFQVYTALLK-----PHERIMA-LDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL 223 (519)
Q Consensus 151 Gs~-a~~~~~~all~-----pGD~Vl~-~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~ 223 (519)
|++ ++..++.++++ |||.|++ .++++.++....... + .+.+.....++++.+...+.+|+++++ +..
T Consensus 105 Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~ 178 (416)
T PRK09440 105 GSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEE---D-LFVSYRPNIELLPEGQFKYHVDFEHLH--IDE 178 (416)
T ss_pred ChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhcc---C-ceeecccccccccccccccCCCHHHcc--cCC
Confidence 998 88878888885 6999999 587776654311100 0 011222222332211113578999987 343
Q ss_pred hCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhc---cccCCCCCCCCCCeEEEEcCCCc-ccCCC
Q 010058 224 FRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGL---VAAGVIPSPFEYADVVTTTTHKS-LRGPR 294 (519)
Q Consensus 224 ~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~---~~~~~~~~p~~~~di~~~S~~K~-l~Gpr 294 (519)
++++++++ |+| +|...+ +++|.++|+++|+++|+|+++.... ......+. ...--|++.|++|+ ++|.|
T Consensus 179 -~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~-~~~~vI~~~SfSK~~~pGlR 256 (416)
T PRK09440 179 -DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPL-WNPNIILCMSLSKLGLPGVR 256 (416)
T ss_pred -CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCcc-ccCCeEEEecccccCCCcce
Confidence 78888887 777 887777 5677788899999999999974211 00011110 01234777899996 57889
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHH----H-HHHHHHHHHHHHH
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYK----A-YQEQVLSNSSKFA 369 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~----~-~~~~~~~~~~~l~ 369 (519)
.||+++++ ++.+.+........ .+++.....+++.++.. ..+. + .++.++++++.+.
T Consensus 257 iG~~i~~~--------------~l~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~r~~~~~ 318 (416)
T PRK09440 257 CGIVIADE--------------EIIEALSNMNGIIS-LAPGRLGPAIAAEMIES---GDLLRLSETVIRPFYRQKVQLAI 318 (416)
T ss_pred EEEEeCCH--------------HHHHHHHHHHHHhc-cCCCcHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHH
Confidence 99999887 55555443322211 22333333343444432 2232 2 3455667777777
Q ss_pred HHHHhc----CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCC-------CCCeEEeccCc
Q 010058 370 RSLLER----GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAM-------VPGGIRMGTPA 437 (519)
Q Consensus 370 ~~L~~~----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~-------~~~~iRi~~~~ 437 (519)
+.|.+. ++.+..+ ..+.++|+.+...+.+..++.+.|.++||.+. ||.. .+. ..+++||++..
T Consensus 319 ~~L~~~l~~~~~~~~~p-~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~----pg~~F~~~~~~~~~~~~~~iRis~~~ 393 (416)
T PRK09440 319 ALLRRYLPDEPCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLVV----PGHYFFPGLDEDWPHAHQCIRMNYVQ 393 (416)
T ss_pred HHHHHhcccCCeEEecC-CCceEEEEECCCCCCCHHHHHHHHHHCCEEEe----chHhhCCCCccccCCcCceEEEEecC
Confidence 777654 3444333 33567788775434567778888888999997 4432 111 13589999863
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHH
Q 010058 438 LTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 438 ~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+ ++++++.++.|.+++..
T Consensus 394 --~----~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 394 --D----DEEIEKGIAILAEEVEK 411 (416)
T ss_pred --C----HHHHHHHHHHHHHHHHH
Confidence 4 68999999999888764
No 181
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=1.3e-21 Score=194.06 Aligned_cols=223 Identities=20% Similarity=0.192 Sum_probs=161.2
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 125 SLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
+.+++.++++||++. .+++++|++ ++.+++.++++|||+|++....|.++.. .+...|..+..++.
T Consensus 62 ~~~~~~~A~~~ga~~-----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~--------~~~~~g~~~~~v~~ 128 (294)
T cd00615 62 KEAQELAARAFGAKH-----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN--------GLVLSGAVPVYLKP 128 (294)
T ss_pred HHHHHHHHHHhCCCC-----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH--------HHHHCCCEEEEecC
Confidence 345588999999875 266678877 8998999999999999999987766654 23345655556554
Q ss_pred eeCCC---CCCCCHHHHHHHhhh-hCCcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC--
Q 010058 204 RLDES---TGYIDYEQLEKSAAL-FRPKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF-- 276 (519)
Q Consensus 204 ~~d~~---~~~iD~d~l~~~i~~-~k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~-- 276 (519)
..+++ .+.+|++++++++++ .++++|+++.++ +|...|+++|.++|+++|+++++|+||...+...+..+...
T Consensus 129 ~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~ 208 (294)
T cd00615 129 ERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAM 208 (294)
T ss_pred ccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhh
Confidence 43322 147999999999875 368888888445 79999999999999999999999999876543322222111
Q ss_pred CCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHH
Q 010058 277 EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYK 355 (519)
Q Consensus 277 ~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~ 355 (519)
.++|+++.|+||+++|+++ |++..+++.. + ..++.........++|+...++++..+++++... -+
T Consensus 209 ~~~div~~S~hK~l~g~~~~~~l~~~~~~~-----------~-~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~-g~ 275 (294)
T cd00615 209 AGADIVVQSTHKTLPALTQGSMIHVKGDLV-----------N-PDRVNEALNLHQSTSPSYLILASLDVARAMMALE-GK 275 (294)
T ss_pred cCCcEEEEchhcccchHhHHHHHHhCCCcC-----------C-HHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHH-hH
Confidence 1689999999999999886 6776765311 1 1222222222234789999999999999887533 35
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010058 356 AYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 356 ~~~~~~~~~~~~l~~~L~ 373 (519)
++.++..++++.+++.|.
T Consensus 276 ~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 276 ELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 667888888888888775
No 182
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.87 E-value=5e-20 Score=186.71 Aligned_cols=316 Identities=15% Similarity=0.174 Sum_probs=210.5
Q ss_pred CCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCcee
Q 010058 113 YYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKIS 192 (519)
Q Consensus 113 ~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~ 192 (519)
-|++.....++| +.+++++|.++ -|.++||+.|...+....++|||+| +++.+-..... .+.
T Consensus 66 ~yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~a-------hIe 127 (450)
T TIGR02618 66 AYAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRY-------HQE 127 (450)
T ss_pred hhcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHH-------HHH
Confidence 356667778888 88889999987 3778888888554666669999988 33333111110 122
Q ss_pred eeeeeeEEEeee-------eCCCCCCCCHHHHHHHhhhh---CCcEEEEc-ccc-c-ccc---ccHHHHHHHHhhcCCEE
Q 010058 193 AVSIFFETMPYR-------LDESTGYIDYEQLEKSAALF---RPKLIVAG-ASA-Y-ARL---YDYARIRKVCDKQKAVM 256 (519)
Q Consensus 193 ~~g~~~~~v~~~-------~d~~~~~iD~d~l~~~i~~~---k~klIi~~-~sn-~-g~~---~d~~~i~~ia~~~~~~l 256 (519)
..|..+.-++.+ .++.++.+|++++++++++. ++++|.+. ++| . |.. .+++++.++|++||+.|
T Consensus 128 ~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~v 207 (450)
T TIGR02618 128 KNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKV 207 (450)
T ss_pred hCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEE
Confidence 334322222111 12457899999999999863 23345444 555 4 566 46899999999999999
Q ss_pred Eehhhhhhhc--c----ccCCCCCC--------CCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHh
Q 010058 257 LADMAHISGL--V----AAGVIPSP--------FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKI 322 (519)
Q Consensus 257 ivD~ah~~g~--~----~~~~~~~p--------~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i 322 (519)
|.|+||..|- + ..+....+ +.++|.+++|++|...+|-||+|+++++ ++.+++
T Consensus 208 i~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~-------------~l~~k~ 274 (450)
T TIGR02618 208 FYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD-------------EMFQSA 274 (450)
T ss_pred EEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH-------------HHHHHH
Confidence 9999999853 2 11222222 3489999999999999999999998875 677766
Q ss_pred hhc--ccCCCC--CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccC---
Q 010058 323 NQA--VFPGLQ--GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRN--- 395 (519)
Q Consensus 323 ~~~--~~~~~~--g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~--- 395 (519)
+.. .+.+.. |+.....+.|++.+|.+..+ ..+.++...++++|.+.|.+.|++++.+ ...|.++++...
T Consensus 275 r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~p-~ggh~V~vda~~~lp 350 (450)
T TIGR02618 275 KELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVEP-VGGHAVFLDARRFLP 350 (450)
T ss_pred HHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccCC-CCcceEEEEhHHhCC
Confidence 554 333432 44455577888888887654 3667778889999999999999999765 456888888643
Q ss_pred ----CCCcHHHHHHhh-cccCeEEcc-ccc-----CCCCCCCC--CCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 396 ----KGIDGSRVEKVL-ESVHIAANK-NTV-----PGDVSAMV--PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 396 ----~~~~~~~~~~~L-~~~gI~v~~-~~~-----p~~~~~~~--~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
....+..+...| .+.||..-- .++ |....... -.-+|+..+- |=.+.+.|+.+++.|..+.++.
T Consensus 351 h~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr---r~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 351 HIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPR---RVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred CCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecccc---ccccHhHHHHHHHHHHHHHhhH
Confidence 123455555555 456775421 111 11111111 2468998764 3345799999999999999887
Q ss_pred hhhc
Q 010058 463 LKIK 466 (519)
Q Consensus 463 ~~~~ 466 (519)
..++
T Consensus 428 ~~~~ 431 (450)
T TIGR02618 428 DDIR 431 (450)
T ss_pred hhcC
Confidence 6654
No 183
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.86 E-value=5.5e-21 Score=193.18 Aligned_cols=268 Identities=22% Similarity=0.301 Sum_probs=181.5
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 125 SLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
.++++.++++||++. ...+++||+ +|.++++++++|||+|++....|-+.+. ++.+.|..++.++-
T Consensus 69 ~eAe~~aA~~fGAd~-----t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~--------alil~ga~Pvyi~p 135 (417)
T PF01276_consen 69 KEAEELAARAFGADK-----TFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYN--------ALILSGAIPVYIPP 135 (417)
T ss_dssp HHHHHHHHHHHTESE-----EEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHH--------HHHHHTEEEEEEEE
T ss_pred HHHHHHHHHhcCCCe-----EEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCCeEEEecC
Confidence 445599999999987 488899999 9999999999999999999866666554 45566777766654
Q ss_pred eeCCCCC---CCCH-----HHHHHHhhhhC----CcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccC
Q 010058 204 RLDESTG---YIDY-----EQLEKSAALFR----PKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAG 270 (519)
Q Consensus 204 ~~d~~~~---~iD~-----d~l~~~i~~~k----~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~ 270 (519)
. +.+.+ .+++ +.|+++++++. ++++++..++ +|...|+++|.++|++++++|++|+||.+-+-...
T Consensus 136 ~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~ 214 (417)
T PF01276_consen 136 E-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHP 214 (417)
T ss_dssp E-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSG
T ss_pred C-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCC
Confidence 3 33222 4566 99999998632 2347777444 89999999999999999999999999976544444
Q ss_pred CCCCCCC-CCe-------EEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHH
Q 010058 271 VIPSPFE-YAD-------VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISG 341 (519)
Q Consensus 271 ~~~~p~~-~~d-------i~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaa 341 (519)
+..+.+. ++| +++.|+||+|++... ++|..+.+.. --.++++....-...++|+...+++
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~-----------v~~~~~~~~l~~~~TTSPSY~lmAS 283 (417)
T PF01276_consen 215 LPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRI-----------VDHERVNEALSMHQTTSPSYPLMAS 283 (417)
T ss_dssp GGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCC-----------TTHHHHHHHHHHHS-SS--HHHHHH
T ss_pred CccchhhccCccccccceeeeechhhcccccccceEEEecCCCc-----------ccHHHHHHHHHHHcCCChHHHHHHH
Confidence 4444343 788 999999999999887 7888887520 0123333332222347899999999
Q ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh---c-CCEEecCC---C-------------------------Cccee
Q 010058 342 LAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE---R-GYDLVSGG---T-------------------------ENHLV 389 (519)
Q Consensus 342 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~-g~~~~~~~---~-------------------------~~~~~ 389 (519)
+..|.+++....-++..++..++++.+++.|++ . ++.++.+. . |.-=+
T Consensus 284 lD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ 363 (417)
T PF01276_consen 284 LDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKL 363 (417)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEE
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEE
Confidence 999999885445577888888999999999843 3 66665431 0 00012
Q ss_pred eeec---------cCCCCcHHHHHHhhcccCeEEccc
Q 010058 390 LVNL---------RNKGIDGSRVEKVLESVHIAANKN 417 (519)
Q Consensus 390 ~v~~---------~~~~~~~~~~~~~L~~~gI~v~~~ 417 (519)
.+.+ ...|+++..+.+.|+++||.+.+.
T Consensus 364 ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~ 400 (417)
T PF01276_consen 364 TINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKT 400 (417)
T ss_dssp EEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEE
T ss_pred EEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEec
Confidence 2332 345788999999999999999753
No 184
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.86 E-value=1.1e-19 Score=188.29 Aligned_cols=330 Identities=15% Similarity=0.174 Sum_probs=202.0
Q ss_pred ccCeeecCCC----C-CCc--HHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceE
Q 010058 76 WKGLELIPSE----N-FTS--VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNV 146 (519)
Q Consensus 76 ~~~i~L~a~e----n-~~~--~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V 146 (519)
.+.|+|..+. + .+| +.+.+++.+.+.+.. ...|+...+..++++++.+++.+..+. ++++ ++|
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~------~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~--i~v 97 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETET------TKNYLPIEGLAAYRQAVQELLFGADSPALAAGR--VAT 97 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhccccc------CCCcCCCCCCHHHHHHHHHHhcCCCCcccccCe--EEE
Confidence 4568887663 1 223 678888777654321 122455566778888877887665443 4532 124
Q ss_pred EeCCcHH-HHHHHHHhh--cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh
Q 010058 147 QSLSGSP-ANFQVYTAL--LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL 223 (519)
Q Consensus 147 ~~~sGs~-a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~ 223 (519)
++|+|++ |+..++.++ ++|||+|++.++.+.++.. .+...|..+..+++. +++++.+|+|++++.+..
T Consensus 98 ~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~--------~~~~~g~~~v~v~~~-~~~~~~~d~~~l~~~~~~ 168 (396)
T PRK09257 98 VQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA--------IFEAAGLEVKTYPYY-DAATKGLDFDAMLADLSQ 168 (396)
T ss_pred EecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH--------HHHHcCCcEEEEecc-ccccCccCHHHHHHHHHh
Confidence 9999998 777676555 5899999999977766643 334456666555541 334578999999998864
Q ss_pred hC--CcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhcccc-CCCCCC------CCCCeEEEEcCCCc
Q 010058 224 FR--PKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAA-GVIPSP------FEYADVVTTTTHKS 289 (519)
Q Consensus 224 ~k--~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~-~~~~~p------~~~~di~~~S~~K~ 289 (519)
.+ +++++++ ++| +|...+ +++|.++|++||+++|+|+++. .+... +....+ ....-+++.|++|+
T Consensus 169 ~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~ 247 (396)
T PRK09257 169 APAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQ-GFGDGLEEDAYGLRAFAAAGLELLVASSFSKN 247 (396)
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc-ccccchHHHHHHHHHHHhcCCcEEEEEEcCCc
Confidence 33 3455545 677 887666 5677888999999999999853 22211 000000 01134778999998
Q ss_pred c--cCCCcceEEe--ec-ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc-----CHhHHHHHH
Q 010058 290 L--RGPRGAMIFF--RK-GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK-----TPEYKAYQE 359 (519)
Q Consensus 290 l--~GprgG~i~~--~~-~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~-----~~~~~~~~~ 359 (519)
+ +|+|.||+++ .+ +.. ..+..++...... ..++++.....+++..+.... ....++.++
T Consensus 248 ~~~~GlRiG~~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~ 316 (396)
T PRK09257 248 FGLYGERVGALSVVAEDAEEA----------DRVLSQLKATIRT-NYSNPPAHGAAIVATILNDPELRAEWEAELEEMRE 316 (396)
T ss_pred CccccccceeEEEEeCCHHHH----------HHHHHHHHHHhhh-hcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6 4899999974 22 100 0122222121111 112333333333333332110 123456788
Q ss_pred HHHHHHHHHHHHHHhcC----CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc
Q 010058 360 QVLSNSSKFARSLLERG----YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT 435 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~ 435 (519)
++.++++.+.+.|++.+ +.+..+ ..+.+.|+.+ +...+.+++++.||.+. | .+ ||++
T Consensus 317 ~~~~rr~~l~~~L~~~~~~~~~~~~~p-~gg~~~w~~l-----~~~~~~~l~~~~~V~~~----p--------~~-ri~~ 377 (396)
T PRK09257 317 RIKAMRQLLVEALKAKGPSRDFDFIAR-QRGMFSYSGL-----TPEQVDRLREEFGVYAV----G--------SG-RINV 377 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcccccc-cceEEEecCC-----CHHHHHHHHHcCCEEEc----C--------CC-eEEE
Confidence 88999999999999875 333332 3345556654 34567777889999884 3 12 9988
Q ss_pred CccccCCCCHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
...+ +++++++++.|+++
T Consensus 378 ~~~~-----~~~i~~~~~~i~~~ 395 (396)
T PRK09257 378 AGLN-----ESNIDYVAEAIAAV 395 (396)
T ss_pred eeCC-----HHHHHHHHHHHHhh
Confidence 6544 58999999999875
No 185
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.2e-19 Score=188.17 Aligned_cols=334 Identities=15% Similarity=0.141 Sum_probs=198.3
Q ss_pred ccCeeecCCCC---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEE--e
Q 010058 76 WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ--LDPAKWGVNVQ--S 148 (519)
Q Consensus 76 ~~~i~L~a~en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g--~~~~~~~~~V~--~ 148 (519)
.+.++|..+.. .++..+.+++.+++..-. . ......|+...+..++++++.+++.+..+ ++++ +|. .
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~-~-~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~----~v~~~~ 102 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIA-E-KNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEK----RIATVQ 102 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhc-c-ccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccC----eEEEee
Confidence 35688876652 233344555555542211 0 01123456667788898877777765543 3443 466 4
Q ss_pred CCcHH-HHHHHH---HhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh
Q 010058 149 LSGSP-ANFQVY---TALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 149 ~sGs~-a~~~~~---~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~ 224 (519)
|+|++ +...++ .++++|||+|+++++.|..+.. .+...|..+..+++. +++++.+|++.+++.+.+.
T Consensus 103 t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~~~~~v~l~-~~~~~~~d~~~l~~~~~~~ 173 (404)
T PTZ00376 103 ALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN--------IFKSAGLNVKEYRYY-DPKTKGLDFDGMLEDLRTA 173 (404)
T ss_pred ccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCceeecccc-CcccCCcCHHHHHHHHHhC
Confidence 77776 655444 4678999999999977766644 334556666555541 3345789999999988642
Q ss_pred --CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC---CC--CCC---CCCeEEEEcCCCc
Q 010058 225 --RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV---IP--SPF---EYADVVTTTTHKS 289 (519)
Q Consensus 225 --k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~---~~--~p~---~~~di~~~S~~K~ 289 (519)
++++++++ ++| +|...+ +++|.++|++|++++|+|+++. .+...+. .. ..+ ..--+++.|++|+
T Consensus 174 ~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~ 252 (404)
T PTZ00376 174 PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQ-GFASGDLDKDAYAIRLFAERGVEFLVAQSFSKN 252 (404)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhc-CccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCc
Confidence 35666666 777 887766 5667778999999999999853 2222110 00 000 0124778899997
Q ss_pred c--cCCCcceEE---eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc--C---HhHHHHHH
Q 010058 290 L--RGPRGAMIF---FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK--T---PEYKAYQE 359 (519)
Q Consensus 290 l--~GprgG~i~---~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~--~---~~~~~~~~ 359 (519)
+ +|+|.||++ .++++. ..+...+...... ..++++.....+...+++.-. . ...++..+
T Consensus 253 ~~~~GlRvG~~~~~~~~~~~~----------~~l~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 321 (404)
T PTZ00376 253 MGLYGERIGALHIVCANKEEA----------ANVLSQLKLIIRP-MYSSPPIHGARIADRILSDPELRAEWLSELKEMSG 321 (404)
T ss_pred ccccccccceEEEEeCCHHHH----------HHHHHHHHHHHhh-hcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 5 589999984 344210 0122222211111 112333333333344443210 0 11344556
Q ss_pred HHHHHHHHHHHHHHhcCC----EEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc
Q 010058 360 QVLSNSSKFARSLLERGY----DLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT 435 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~ 435 (519)
+++++++.+.+.|.+.++ .++.+ ..+.+.|+.+ +.+.+..+++++||.+. |+ + |+++
T Consensus 322 ~~~~~r~~l~~~L~~~~~~~~~~~~~p-~gg~f~~~~~-----~~~~~~~L~~~~~v~v~----p~--------~-Ris~ 382 (404)
T PTZ00376 322 RIQNMRQLLYDELKALGSPGDWEHIIN-QIGMFSFTGL-----TKEQVERLIEKYHIYLL----DN--------G-RISV 382 (404)
T ss_pred HHHHHHHHHHHHHHhcCCCCccccccc-CceEEEecCC-----CHHHHHHHHHhCCEeec----CC--------C-eEEE
Confidence 788999999999998753 33332 3345556554 23444555566799984 43 2 9987
Q ss_pred CccccCCCCHHHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
...+ .++++.+++.|++++.
T Consensus 383 ~~~~-----~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 383 AGLT-----SKNVDYVAEAIHDVVR 402 (404)
T ss_pred eccC-----HHhHHHHHHHHHHHHh
Confidence 5433 5899999999998875
No 186
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=1e-19 Score=175.88 Aligned_cols=322 Identities=19% Similarity=0.241 Sum_probs=205.8
Q ss_pred CCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHH
Q 010058 83 PSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYT 160 (519)
Q Consensus 83 a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~ 160 (519)
.|+|. +.|+++++|..+-. .+..-||..+....+| ++++++||... -+++.|||.+|..++.
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLALA 68 (342)
T ss_pred ccCccCCCCHHHHHHHHhccc-------cCCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHHHH
Confidence 35564 47899999876521 2234467777787777 89999999832 4888899999999999
Q ss_pred hhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh------CCcEEEEccc
Q 010058 161 ALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF------RPKLIVAGAS 234 (519)
Q Consensus 161 all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~------k~klIi~~~s 234 (519)
+.++||+.|++-...|-.....|. ..+.+.. ..++. .+..++.+++|+|++.+... +|.++..+..
T Consensus 69 ~~~~~~~~vi~~~~aHi~~~E~Ga------~~~~~~~-~~~~~-~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~ 140 (342)
T COG2008 69 AHCQPGESVICHETAHIYTDECGA------PEFFGGG-QKLPI-VPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTA 140 (342)
T ss_pred HhcCCCCeEEEeccccceecccCc------HHHHcCC-ceecc-CCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeecc
Confidence 999999999988755533332222 2222211 11221 23367899999999977631 3556666643
Q ss_pred c-ccccccH---HHHHHHHhhcCCEEEehhhhhhhc-cccCCCCCCC-CCCeEEEEcCCCcccCCCcceEEeeccccccc
Q 010058 235 A-YARLYDY---ARIRKVCDKQKAVMLADMAHISGL-VAAGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 308 (519)
Q Consensus 235 n-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~-~~~~~~~~p~-~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~ 308 (519)
+ .|.++++ ++|.++|+++|+.|+.|+|..... +..+.....+ .++|+++++.+|+++.|-+.+++++.
T Consensus 141 te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~------ 214 (342)
T COG2008 141 TEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR------ 214 (342)
T ss_pred CCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCH------
Confidence 3 7877775 566778999999999999976543 3333211111 28999999999999888778888887
Q ss_pred ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcc
Q 010058 309 KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENH 387 (519)
Q Consensus 309 ~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 387 (519)
++.++.+...-..- |...-..+.|. ..+..+...-+.....+-.+.++.|.+.|.+. |+++..+ ++++
T Consensus 215 --------~~~~~a~~~rK~~G-gl~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN 283 (342)
T COG2008 215 --------DFAKRARRWRKRAG-GLMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP-VETN 283 (342)
T ss_pred --------HHHHHHHHHHHHhc-ccHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC-Cccc
Confidence 45554332111100 11121222221 12223333224544555555699999999966 9999887 5677
Q ss_pred eeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 388 LVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 388 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
++++.+....++.......+...|+.+. +.+ ..+|+.++.-++ ++|+++++..+++++
T Consensus 284 ~vf~~l~~~~i~~l~~~~~~~~~~~~~~----~~~------~~vRfvts~a~~----~edv~~~~~~~~~~~ 341 (342)
T COG2008 284 MVFVRLPESAIEALRLAGALFYRGVLIG----AHG------EIVRFVTSWATS----EEDVDELVAAIKALL 341 (342)
T ss_pred EEEEECChHHHHHHHhhchhheeeeecc----CCC------ceEEEEeeccCC----HHHHHHHHHHHHHhh
Confidence 8888775432323333334444555543 110 359999998888 999999999988764
No 187
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.86 E-value=1.2e-19 Score=186.16 Aligned_cols=319 Identities=13% Similarity=0.081 Sum_probs=197.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-cHHHHHHHHHhh-cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS-GSPANFQVYTAL-LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s-Gs~a~~~~~~al-l~p 165 (519)
.++.-.+++.+++.... .++..+..+++| +++++++|.+. +++++ |+.|+..++.++ ++|
T Consensus 9 ~~~~~~~~~~~~l~~~~--------~~g~~~~~~~~e----~~la~~~g~~~------~v~~~sgt~al~~~l~~~~~~~ 70 (375)
T PRK11706 9 VVGTELDYIQQAMSSGK--------LCGDGGFTRRCQ----QWLEQRFGSAK------VLLTPSCTAALEMAALLLDIQP 70 (375)
T ss_pred CCHHHHHHHHHHHHcCC--------ccCCCHHHHHHH----HHHHHHhCCCe------EEEECCHHHHHHHHHHHhCCCC
Confidence 45555777777776522 123234455555 78888898864 44554 445776566665 799
Q ss_pred CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHH
Q 010058 166 HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARI 245 (519)
Q Consensus 166 GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i 245 (519)
||+|++++++|.+... .+...|..+.. ++++++++.+|++++++++++ ++|+|+++. .+|...|+++|
T Consensus 71 Gd~Viv~~~t~~~~~~--------~~~~~G~~~v~--~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~-~~G~~~~~~~i 138 (375)
T PRK11706 71 GDEVIMPSYTFVSTAN--------AFVLRGAKIVF--VDIRPDTMNIDETLIEAAITP-KTRAIVPVH-YAGVACEMDTI 138 (375)
T ss_pred CCEEEECCCCcHHHHH--------HHHHcCCEEEE--EecCCCcCCcCHHHHHHhcCC-CCeEEEEeC-CCCCccCHHHH
Confidence 9999999988776654 23344554444 456666788999999999987 899998762 37888999999
Q ss_pred HHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC--CcccCCCcceEEeecccccccccCcchhhhHHHHhh
Q 010058 246 RKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKIN 323 (519)
Q Consensus 246 ~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~--K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~ 323 (519)
.++|+++|+++|+|++|+.|....+..... ..|+.++|+| |.++.+.||+++++++ ++.+++.
T Consensus 139 ~~la~~~~i~vIeD~a~a~g~~~~~~~~g~--~~~~~~~Sf~~~K~l~~g~gG~~~~~~~-------------~~~~~~~ 203 (375)
T PRK11706 139 MALAKKHNLFVVEDAAQGVMSTYKGRALGT--IGHIGCFSFHETKNYTAGEGGALLINDP-------------ALIERAE 203 (375)
T ss_pred HHHHHHcCCEEEEECccccccccCCeeeec--CcCEEEEeCCCCccccccCCeEEEECCH-------------HHHHHHH
Confidence 999999999999999998886433321111 3577778877 9987666677777653 2222111
Q ss_pred hcccC----------------C-CCCC-ccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC----CEEe-
Q 010058 324 QAVFP----------------G-LQGG-PHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG----YDLV- 380 (519)
Q Consensus 324 ~~~~~----------------~-~~g~-~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~- 380 (519)
..... . ..|. ..+..+.| +.++.++ ..+++..++.+++.+.+.+.|.+.. +.+.
T Consensus 204 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a-a~~~~ql--~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~ 280 (375)
T PRK11706 204 IIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQA-AYLWAQL--EAADRINQRRLALWQRYYDALAPLAEAGRIELPS 280 (375)
T ss_pred HHHHcCCCcchhhccCCCcceeeecccccCcCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCC
Confidence 11000 0 0011 11111211 2222332 3467778888888888888887752 3221
Q ss_pred -cCCC--CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCC-----------------CCCeEEeccCcccc
Q 010058 381 -SGGT--ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAM-----------------VPGGIRMGTPALTS 440 (519)
Q Consensus 381 -~~~~--~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~-----------------~~~~iRi~~~~~tt 440 (519)
.++. ..+++++.+.. +.+..++.+.|.++||.++..+.|....+. ....|.+-++
T Consensus 281 ~~~~~~~~~~~~~~~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~---- 355 (375)
T PRK11706 281 IPDDCKHNAHMFYIKLRD-LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLF---- 355 (375)
T ss_pred CCCCCceeeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCC----
Confidence 1111 12344444432 346788999999999998765545432110 0111222222
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 010058 441 RGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 441 rg~~~~di~~l~~~l~~~l 459 (519)
-.++++|++.+++.|++++
T Consensus 356 ~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 356 YNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 2466899999999998764
No 188
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=2e-19 Score=181.78 Aligned_cols=300 Identities=13% Similarity=0.075 Sum_probs=193.3
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
+.|+|..+||+..+ . .. .+ .||.. ..++++ +.+++++|.+++ +|++|+|++ ++
T Consensus 17 ~~i~l~~Nenp~~~-----~-~~-~~----~Yp~~-------~~~~lr----~~ia~~~~~~~~----~I~it~Gs~~~l 70 (332)
T PRK06425 17 RIIDFSANINDFMD-----I-GD-IS----IYPEI-------SYTDIE----DQIKIYTQGLKI----KVLIGPGLTHFI 70 (332)
T ss_pred CEEEeccccCCCcC-----h-hh-cc----cCcCc-------CHHHHH----HHHHHHhCCCcc----eEEECCCHHHHH
Confidence 45899999998741 0 00 11 23322 124455 788899999874 699999999 77
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
..++. +++||+ |+++++++..+.. .+...|..+..+|+ +. ..+|.+.+++ .++|+|+++ |+
T Consensus 71 ~~~~~-~~~~~~-vv~~~P~y~~y~~--------~~~~~G~~v~~vp~--~~--~~~~~~~l~~----~~~k~v~l~nP~ 132 (332)
T PRK06425 71 YRLLS-YINVGN-IIIVEPNFNEYKG--------YAFTHGIRISALPF--NL--INNNPEILNN----YNFDLIFIVSPD 132 (332)
T ss_pred HHHHH-HhCCCc-EEEeCCChHHHHH--------HHHHcCCeEEEEeC--Cc--ccCcHHHHhh----cCCCEEEEeCCC
Confidence 65665 678875 6666755544433 34455666666654 32 3446555442 389999988 77
Q ss_pred c-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C--CCeEEEEcCCCcc--cCCCcceEEeecc
Q 010058 235 A-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSL--RGPRGAMIFFRKG 303 (519)
Q Consensus 235 n-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~--~~di~~~S~~K~l--~GprgG~i~~~~~ 303 (519)
| +|...+. ++|.++|+++|+++|+|+++. .+...+. ++.. . .--+++.|++|++ +|.|.||+++++
T Consensus 133 NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~-~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~- 209 (332)
T PRK06425 133 NPLGNLISRDSLLTISEICRKKGALLFIDEAFI-DFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD- 209 (332)
T ss_pred CCcCCccCHHHHHHHHHHHHHcCCEEEEecchh-ccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH-
Confidence 7 8887774 566667889999999999853 2222111 1100 1 2357778999964 688999999987
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh-HHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE-YKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
++.+.+.....+. +.+..... ++....... .++.++.++++++.+.+.|++.|+.++.+
T Consensus 210 -------------~li~~l~~~~~~~---~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~ 269 (332)
T PRK06425 210 -------------YNMKISRKITEPW---SVCDPAID----FIRSIDLDYVAKHSLDIMENERSYLINNLEAMGFRAAGD 269 (332)
T ss_pred -------------HHHHHHHHcCCCC---ccCHHHHH----HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
Confidence 5666655432222 11211111 122211122 35678888999999999999999877543
Q ss_pred CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 383 GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 383 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
. .+.++|+.+. +..++.+.|.+.||.++ |+.. +..+++++||++.. .++++++.++|++++
T Consensus 270 ~-~g~f~~~~~~----~~~~~~~~l~~~gi~v~----~~~~f~~~~~~~iRis~~~-------~~~~~~l~~al~~~~ 331 (332)
T PRK06425 270 P-SANFITFMIP----DAHDFYSYLLKNGILVR----LLDDYECLGEQYIRIAIRR-------RSFNIKLVNALRNFL 331 (332)
T ss_pred C-CceEEEEEcC----CHHHHHHHHHHCCeEEE----ECCCCCCCCCCEEEEEeCC-------HHHHHHHHHHHHHHh
Confidence 2 3446677653 46778888878999997 5543 22335789999653 689999999998765
No 189
>PLN02368 alanine transaminase
Probab=99.86 E-value=1.8e-19 Score=185.90 Aligned_cols=252 Identities=13% Similarity=0.057 Sum_probs=167.1
Q ss_pred CCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhc-CCCCEEEEecCCCcccccccccccCCc
Q 010058 113 YYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALL-KPHERIMALDLPHGGHLSHGYQTDTKK 190 (519)
Q Consensus 113 ~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all-~pGD~Vl~~~~~~~~~~~~~~~~~~~~ 190 (519)
.|+...+..++++++.+++.+.+|.+.+. .+|++|+|++ ++..++.+++ +|||+|+++++.+..+.. .
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~--------~ 171 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSDP--ELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA--------T 171 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH--------H
Confidence 45666677789888889998888864322 3699999998 8887888887 799999999976665543 3
Q ss_pred eeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhh-----CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEeh
Q 010058 191 ISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALF-----RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLAD 259 (519)
Q Consensus 191 v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~-----k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD 259 (519)
+...|..+..++ ++. +++.+|++++++.+++. ++|+++++ |+| +|..++ +++|.++|++||++||+|
T Consensus 172 ~~~~g~~~v~v~--~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~D 249 (407)
T PLN02368 172 ISLLGGTLVPYY--LEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGD 249 (407)
T ss_pred HHHcCCEEEEEe--cccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 445565555554 333 35789999999988742 68877776 878 887776 456677889999999999
Q ss_pred hhhhhhccccCC--CCC----------CCC-C-CeEEEEcCCCcc---cCCCcceEEe---ecccccccccCcchhhhHH
Q 010058 260 MAHISGLVAAGV--IPS----------PFE-Y-ADVVTTTTHKSL---RGPRGAMIFF---RKGVKEINKQGQEVMYAYE 319 (519)
Q Consensus 260 ~ah~~g~~~~~~--~~~----------p~~-~-~di~~~S~~K~l---~GprgG~i~~---~~~~~~~~~~g~~~~~~~~ 319 (519)
+++.. +...+. ..+ +.. + .-+++.|++|++ +|+|.||+++ ++ ++.
T Consensus 250 E~Y~~-l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~--------------~li 314 (407)
T PLN02368 250 EVYQQ-NIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP--------------KTV 314 (407)
T ss_pred ccccc-cccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCH--------------HHH
Confidence 98532 222121 111 001 1 347778999975 6999999985 44 455
Q ss_pred HHhhhcccCCCCCCccHHHHHHHHHHHHHhc--C-------HhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCccee
Q 010058 320 DKINQAVFPGLQGGPHNHTISGLAVALKQVK--T-------PEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLV 389 (519)
Q Consensus 320 ~~i~~~~~~~~~g~~~~~~iaal~~al~~~~--~-------~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 389 (519)
+.+..... . ..+++.....++.+++..-. + .+.+++.+.++++++.+.+.|+++ |+.+..+ ..+++.
T Consensus 315 ~~~~~~~~-~-~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P-~Gafy~ 391 (407)
T PLN02368 315 EEIYKVAS-I-ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFT-EGAMYS 391 (407)
T ss_pred HHHHHHhc-c-cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCC-CeeeEe
Confidence 55444321 1 12334444444455554211 0 111346778899999999999998 8876554 345666
Q ss_pred eeecc
Q 010058 390 LVNLR 394 (519)
Q Consensus 390 ~v~~~ 394 (519)
|+++.
T Consensus 392 ~~~i~ 396 (407)
T PLN02368 392 FPQIK 396 (407)
T ss_pred ccCCC
Confidence 66553
No 190
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=3.6e-19 Score=179.96 Aligned_cols=303 Identities=15% Similarity=0.146 Sum_probs=200.0
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC---CCCCCCcceEEeCC
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ---LDPAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g---~~~~~~~~~V~~~s 150 (519)
.+.|+|..++|+ +|+.+++++.+.+..... .+|+.. +..+++ +.+++.++ ++++ +|.+|+
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~------~~Y~~~-~~~~Lr----~aia~~~~~~~~~~~----~i~it~ 83 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDTL------RIYYDS-PDEELI----EKILSYLDTDFLSKN----NVSVGN 83 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhhh------hcCCCC-ChHHHH----HHHHHHhCCCCCCcc----eEEEcC
Confidence 466899988885 588999999876643210 112221 345666 44555555 6664 699999
Q ss_pred cHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 151 GSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 151 Gs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
|++ ++..++.++ |.|++.+++|..+.. .+...|..+..++ .++ ++.+|.+. + . ++++|
T Consensus 84 Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~--------~~~~~g~~~~~v~--~~~-~~~~~~~~----~-~-~~~~i 142 (335)
T PRK14808 84 GADEIIYVMMLMF----DRSVFFPPTYSCYRI--------FAKAVGAKFLEVP--LTK-DLRIPEVN----V-G-EGDVV 142 (335)
T ss_pred CHHHHHHHHHHHh----CcEEECCCCHHHHHH--------HHHHcCCeEEEec--CCC-cCCCChhH----c-c-CCCEE
Confidence 998 877777776 789998866655543 3445566655555 342 35554332 2 2 56888
Q ss_pred EEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeecc
Q 010058 230 VAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKG 303 (519)
Q Consensus 230 i~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~~ 303 (519)
+++ |+| +|...+.+++.+++ +++++||+|+++.. +..... ...+. ..-+++.|++|++ +|+|.||+++++
T Consensus 143 ~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~-f~~~~~-~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~- 218 (335)
T PRK14808 143 FIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYE-FHGESY-VDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE- 218 (335)
T ss_pred EEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhh-hcCCch-HHHHHhCCCEEEEEechhhccCcccceEEEEeCH-
Confidence 887 777 89999999999999 57999999999642 211110 00011 1357788999976 589999999987
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGG 383 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 383 (519)
++.+.+.....+. +.+.....+...+++. ...+++..+++.++++.+.+.|++.|+.+..+
T Consensus 219 -------------~~~~~l~~~~~~~---~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~- 279 (335)
T PRK14808 219 -------------KFIDAYNRVRLPF---NVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS- 279 (335)
T ss_pred -------------HHHHHHHHhcCCC---CCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-
Confidence 5666665443222 2233333444555542 22356667788888999999999999876553
Q ss_pred CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
++.++|+.+. +.+..++.+.|.++||.++. . ..++||++.. .++++++++.|++
T Consensus 280 -~g~f~~~~l~--~~~~~~~~~~l~~~Gi~V~~----~------~~~~Risi~~-------~~~~~~~~~~l~~ 333 (335)
T PRK14808 280 -RGNFVFIFME--KEEKERLLEHLRAKNIAVRS----F------REGVRITIGK-------REENDMILKELEV 333 (335)
T ss_pred -CCeEEEEeCC--CccHHHHHHHHHHCCeEEEE----C------CCCeEEecCC-------HHHHHHHHHHHHh
Confidence 3456676654 23456788889999999972 1 2479999653 6899999998864
No 191
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=3.7e-19 Score=180.14 Aligned_cols=307 Identities=16% Similarity=0.102 Sum_probs=200.6
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.++|..++|+ +++.+++++.+.+......+|| . .+...++ +.+++++|++++ +|++|+|++
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~-~g~~~lr----~~ia~~~~~~~~----~I~~t~G~~~ 83 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYP------H-ITSDPLR----EAIAEFYGLDAE----NIAVGNGSDE 83 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCC------C-CCHHHHH----HHHHHHhCcCcc----eEEEcCCHHH
Confidence 45888888875 4688999998877431111233 1 2345555 777778888874 699999998
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
++..++.++ +||+|+++++.|+.+.. .....|..+..++ .+ +++.+|++.+++.. + ++++++++
T Consensus 84 ~l~~~~~~~--~gd~V~v~~P~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~-~-~~~~v~~~~ 148 (337)
T PRK03967 84 LISYLVKLF--EGKHIVITPPTFGMYSF--------YAKLNGIPVIDVP--LK-EDFTIDGERIAEKA-K-NASAVFICS 148 (337)
T ss_pred HHHHHHHHh--CCCeEEEeCCChHHHHH--------HHHHcCCeEEEee--cC-CCCCcCHHHHHHhc-c-CCCEEEEeC
Confidence 666555554 89999999977654321 1233455555554 44 34789999998865 3 68888877
Q ss_pred ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--CCeEEEEcCCCcc--cCCCcceEEeecccccc
Q 010058 233 ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--YADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 307 (519)
Q Consensus 233 ~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--~~di~~~S~~K~l--~GprgG~i~~~~~~~~~ 307 (519)
|+| +|...+.++|.++++ +++++|+|+++.. +......+ .+. .--+++.|++|.+ +|.|.||+++++
T Consensus 149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~-~~~~~~~~-~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~----- 220 (337)
T PRK03967 149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAE-FSGKSLIG-LIDEYPNLILLRTFSKAFGLAGIRAGYAIANE----- 220 (337)
T ss_pred CCCCCCCCCCHHHHHHHHh-cCCEEEEECchhh-hcccchHH-HHhhCCCEEEEecchHhhcchhhhheeeecCH-----
Confidence 777 899999999999995 6999999999752 21111000 000 1247788999976 688999999987
Q ss_pred cccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcc
Q 010058 308 NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENH 387 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 387 (519)
++.+.+.....+ .+.+.....++..+++. ...+.+..+.+.++++.+.+.|.+.. .+ ..+.
T Consensus 221 ---------~~i~~~~~~~~~---~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~----~~-~~~~ 281 (337)
T PRK03967 221 ---------EIIDALYRIKPP---FSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYA----YP-SDAN 281 (337)
T ss_pred ---------HHHHHHHhhcCC---CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCc----CC-CCCc
Confidence 555555543322 13344444444444442 12345566677788888888887642 12 2344
Q ss_pred eeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 388 LVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 388 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
++|+.+. +.+.|.++||.++. +.. ...+++||++.. .++.+++.+.|.++...
T Consensus 282 ~~~~~~~--------~~~~l~~~gi~v~~----~~~--~~~~~~Ri~~~~-------~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 282 FLLLKLD--------AYDYLLENGIVVRK----LSG--RLEGHIRVTVGK-------REENDEFIKALKEIKEG 334 (337)
T ss_pred EEEEhHH--------HHHHHHHCCEEEEe----CCC--CCCCeEEEecCC-------HHHHHHHHHHHHHHHHh
Confidence 5565441 56777778999973 221 235689999653 68899999999887653
No 192
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.85 E-value=1.1e-19 Score=174.90 Aligned_cols=333 Identities=17% Similarity=0.201 Sum_probs=237.9
Q ss_pred CeeecCCCCCC----cHHHHHHHhhHhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPSENFT----SVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~en~~----~~~V~ea~~~~l~~~~~~g~p~~~~y~~-~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.+....|..++ .|.|++|+.+.+.. |..|--|.|.-.| +.....|| +.++++.+-+. -++++|+.
T Consensus 172 ~VtVWCSNDYLgms~Hp~V~~A~~~tl~~-hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~a-----ALlFsSCf 241 (570)
T KOG1360|consen 172 KVTVWCSNDYLGMSRHPEVLDAMHDTLDR-HGAGAGGTRNISGHSKHHVRLE----AELADLHQKEA-----ALLFSSCF 241 (570)
T ss_pred ceEEEecCccccccCChHHHHHHHHHHHH-cCCCcCCccccCCCCchhhhHH----HHHHHHhcCcc-----eeeeeeee
Confidence 35555666654 68999999999875 6556666665444 45567777 77888888775 38999998
Q ss_pred HHHHHHHHhh--cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh---hCCc
Q 010058 153 PANFQVYTAL--LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL---FRPK 227 (519)
Q Consensus 153 ~a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~---~k~k 227 (519)
-||.+.+..| .-||-+|......|.+.+. ++.-++. .+.+ ++ .-|+++|++++.. ..||
T Consensus 242 VANDstLftLak~lpgcei~SD~gNHASMI~--------GIrns~v-~K~I-Fr------HND~~hL~~lL~~~~~svPK 305 (570)
T KOG1360|consen 242 VANDSTLFTLAKKLPGCEIFSDEGNHASMIQ--------GIRNSRV-PKHI-FR------HNDLDHLEQLLQSSPKSVPK 305 (570)
T ss_pred eccchHHHHHHHHCCCcEEeccccchHHHHH--------HhhhcCC-ccee-ec------cCCHHHHHHHHHhCCCCCCc
Confidence 8999888887 4589998866644444432 2322221 1111 11 3478888887764 3589
Q ss_pred EEEEc--cccccccccHHHHHHHHhhcCCEEEehhhhhhhcccc---CC--CCCCCCCCeEEEEcCCCcccCCCcceEEe
Q 010058 228 LIVAG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAA---GV--IPSPFEYADVVTTTTHKSLRGPRGAMIFF 300 (519)
Q Consensus 228 lIi~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~---~~--~~~p~~~~di~~~S~~K~l~GprgG~i~~ 300 (519)
+|.+. .|..|.+.|+++|++++++||++..+|+.|+.|+... |+ .+.-+...||++++..|++ |.-||||..
T Consensus 306 ivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIAa 384 (570)
T KOG1360|consen 306 IVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIAA 384 (570)
T ss_pred eEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceehh
Confidence 99887 6668999999999999999999999999999998642 22 2222336899999999986 567899998
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCCC-C-CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCE
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPGL-Q-GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYD 378 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~-~-g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 378 (519)
.. ++.+.+++. .+|. . .+.+...+++...+.+.+...+-...+++.++|.+++.+.|.++|++
T Consensus 385 t~--------------~LvDmiRSy-AaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiP 449 (570)
T KOG1360|consen 385 TR--------------KLVDMIRSY-AAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIP 449 (570)
T ss_pred hh--------------hHHHHHHHh-cCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 87 556555443 2322 2 34455566666678887776666788899999999999999999999
Q ss_pred EecCCCCcceeeeeccCCCCcHHHHHH-hhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 379 LVSGGTENHLVLVNLRNKGIDGSRVEK-VLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~~~~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
++. .++|++-+.+....+ ..++.+ ++.+.||.+.....|. .+.+...+||......| ++-|+.+++.+.+
T Consensus 450 Vi~--~pSHIiPv~vgda~l-~~~~sd~Li~~h~iYvQaINyPT--V~rG~E~LRiaPTP~HT----~~mm~~lv~~l~~ 520 (570)
T KOG1360|consen 450 VIP--NPSHIIPVRVGDAAL-AKQASDILISKHNIYVQAINYPT--VARGTERLRIAPTPHHT----PQMMNILVNALLD 520 (570)
T ss_pred ccC--CCcceeeeeccCHHH-HHHHHHHHHHhcCeEEEeccCCc--ccccceeeecCCCCCCC----HHHHHHHHHHHHH
Confidence 987 446777776654333 344544 5578999986432332 34556789999877777 8889999999988
Q ss_pred HHHH
Q 010058 458 AVKL 461 (519)
Q Consensus 458 ~l~~ 461 (519)
+...
T Consensus 521 vw~~ 524 (570)
T KOG1360|consen 521 VWNE 524 (570)
T ss_pred HHHH
Confidence 8764
No 193
>PRK05968 hypothetical protein; Provisional
Probab=99.85 E-value=1.3e-19 Score=186.32 Aligned_cols=288 Identities=17% Similarity=0.154 Sum_probs=188.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
....++| +.+++++|.+. .+.++||+.|+..++.++++|||+|++....|++.+..... .+...|..
T Consensus 63 p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~----~~~~~G~~ 129 (389)
T PRK05968 63 PTVRAFE----EMLAKLEGAED-----ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFET----ILKRMGVE 129 (389)
T ss_pred hhHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHH----HHHHcCce
Confidence 4466777 88889999975 38889999898888889999999999999877765432211 11223444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ ..|++++++++ + +||+|+++ ++| .+...|+++|.++|+++|+++++|+++..+...... ..
T Consensus 130 v~~vd--------~~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~-~~- 197 (389)
T PRK05968 130 VDYVD--------GRDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPI-TL- 197 (389)
T ss_pred EEEeC--------CCCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCch-hc-
Confidence 43332 12889999887 4 78999888 666 668899999999999999999999998766432221 11
Q ss_pred CCCCeEEEEcCCCcccCC---CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH
Q 010058 276 FEYADVVTTTTHKSLRGP---RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP 352 (519)
Q Consensus 276 ~~~~di~~~S~~K~l~Gp---rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~ 352 (519)
++|++++|++|+++|| ++|+++.++ ++.+++.....+...+..+. ..++ ..+..+.
T Consensus 198 --g~Divv~S~tK~l~g~~~~~gG~i~~~~--------------~~~~~l~~~~~~~~g~~~~~-~~A~--~~l~~L~-- 256 (389)
T PRK05968 198 --GVDLVIHSASKYLGGHSDTVAGVVAGSK--------------EHIARINAEAYPYLGAKLSP-FEAW--LLLRGLR-- 256 (389)
T ss_pred --CCcEEEeeccccccCCCCeEEEEEEECH--------------HHHHHHHHHHHHhCCCCCCh-HHHH--HHHcccC--
Confidence 6899999999999886 458888776 44444433222221122222 1111 1233333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc-CCEEec-CCCCc--------c--eeeeeccCCCCcHHHHHHhhcccCeEEcccc--
Q 010058 353 EYKAYQEQVLSNSSKFARSLLER-GYDLVS-GGTEN--------H--LVLVNLRNKGIDGSRVEKVLESVHIAANKNT-- 418 (519)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~--------~--~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-- 418 (519)
.+....++..++++.+.+.|++. ++..+. ++..+ + ++.+.+.. +.+..++.+.|...++.++-+.
T Consensus 257 tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~~~s~G~~~ 335 (389)
T PRK05968 257 TLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRLGVSWGGHE 335 (389)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEEecCCCCCC
Confidence 36777888889999999999988 564443 32111 1 33344432 3455667778877777776422
Q ss_pred ---cCCCCC-----------C--CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 419 ---VPGDVS-----------A--MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 419 ---~p~~~~-----------~--~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+|.... . ..++.||+|++. ||.+.+++-|.+++.
T Consensus 336 slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl--------E~~~dl~~dl~~al~ 385 (389)
T PRK05968 336 SLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL--------EGTEALWADLEQALA 385 (389)
T ss_pred ceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc--------CCHHHHHHHHHHHHH
Confidence 122110 1 114679999875 556666666666665
No 194
>PLN02397 aspartate transaminase
Probab=99.85 E-value=3.2e-19 Score=185.82 Aligned_cols=303 Identities=18% Similarity=0.204 Sum_probs=184.0
Q ss_pred CCCCchhHHHHHHHHHHHHHHHcCCC-CCCCc--ceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCC
Q 010058 113 YYGGNEYIDMAESLCQKRALDAFQLD-PAKWG--VNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTK 189 (519)
Q Consensus 113 ~y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~--~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~ 189 (519)
.|+...+..+++++..+++.+..+.. .+.+- +++..++|+.+....+.+++.|||+|+++++.|+.+..
T Consensus 86 ~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~-------- 157 (423)
T PLN02397 86 EYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN-------- 157 (423)
T ss_pred CCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH--------
Confidence 36666778889877777775543321 11110 11333444444444566667799999999977766644
Q ss_pred ceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh--hCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhh
Q 010058 190 KISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL--FRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAH 262 (519)
Q Consensus 190 ~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~--~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah 262 (519)
.+...|..+..+++. +++++.+|++.+++.+.. .++++++++ ++| +|...+ +++|.++|++||+++|+|+++
T Consensus 158 ~~~~~g~~~~~v~l~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y 236 (423)
T PLN02397 158 IFRDAGVPVRTYRYY-DPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAY 236 (423)
T ss_pred HHHHcCCeEEEeecc-cCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc
Confidence 344556666555542 223578999999887763 256777777 777 887766 566778889999999999985
Q ss_pred hhhccccCC---CCC--CC--CC-CeEEEEcCCCcc--cCCCcceEE--ee-cccccccccCcchhhhHHHHhhhcccCC
Q 010058 263 ISGLVAAGV---IPS--PF--EY-ADVVTTTTHKSL--RGPRGAMIF--FR-KGVKEINKQGQEVMYAYEDKINQAVFPG 329 (519)
Q Consensus 263 ~~g~~~~~~---~~~--p~--~~-~di~~~S~~K~l--~GprgG~i~--~~-~~~~~~~~~g~~~~~~~~~~i~~~~~~~ 329 (519)
. ++...+. .+. .+ .+ .-+++.|++|++ +|+|.||++ .. .+.. ..+...+......
T Consensus 237 ~-~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~----------~~~~~~~~~~~~~- 304 (423)
T PLN02397 237 Q-GFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVA----------VRVKSQLKLIARP- 304 (423)
T ss_pred C-CccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHH----------HHHHHHHHHHHhc-
Confidence 3 3332220 000 01 01 247788999986 599999985 32 2100 0122222221111
Q ss_pred CCCCccHHHHHHHHHHHHHh--cC---HhHHHHHHHHHHHHHHHHHHHHhcC----CEEecCCCCcceeeeeccCCCCcH
Q 010058 330 LQGGPHNHTISGLAVALKQV--KT---PEYKAYQEQVLSNSSKFARSLLERG----YDLVSGGTENHLVLVNLRNKGIDG 400 (519)
Q Consensus 330 ~~g~~~~~~iaal~~al~~~--~~---~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~ 400 (519)
...+++.....+.+.++..- .+ ..+++.++++.++++.+.+.|++.| +.++.+ ..+.+.|+++ +.
T Consensus 305 ~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p-~gg~fl~~~l-----~~ 378 (423)
T PLN02397 305 MYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITK-QIGMFSFTGL-----NK 378 (423)
T ss_pred ccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccC-CceEEEecCC-----CH
Confidence 11223333333333334211 00 1146677899999999999999987 655443 3455666654 34
Q ss_pred HHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 401 SRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 401 ~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+.+.++|+++||.+. +++ |+++...+ +++++++++.|++++.
T Consensus 379 ~~~~~Ll~~~~V~v~------------~~~-Ri~~~~~~-----~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 379 EQVDRMTKEYHIYMT------------RDG-RISMAGLS-----SKNVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHhCCEEEC------------CCC-eEEEeeCC-----HHHHHHHHHHHHHHHh
Confidence 455666788999984 122 99875443 5899999999999985
No 195
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.84 E-value=4.4e-19 Score=179.11 Aligned_cols=300 Identities=19% Similarity=0.212 Sum_probs=188.9
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
+.++|..++|+.++.+.+...+.+ ..|+...+ .+++ +++++++|++++ +|++++|++ ++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~y~~~~~-~~lr----~~la~~~~~~~~----~i~~t~G~~~~i 77 (330)
T TIGR01140 18 DWLDFSTGINPLGPPVPPIPASAW-----------ARYPDPEY-DELR----AAAAAYYGLPAA----SVLPVNGAQEAI 77 (330)
T ss_pred heeEccccCCCCCCChhhcchHHH-----------hhCCCccH-HHHH----HHHHHHhCCChh----hEEECCCHHHHH
Confidence 457888888876544444322222 11233232 5555 778888898764 699999999 65
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
.+ +..++.+| .|++.++.|..+... ....|..+..++ |++++++.+. ++++|+++ ++
T Consensus 78 ~~-~~~~l~~g-~vl~~~p~y~~~~~~--------~~~~g~~~~~~~----------d~~~l~~~~~--~~~~v~i~~p~ 135 (330)
T TIGR01140 78 YL-LPRLLAPG-RVLVLAPTYSEYARA--------WRAAGHEVVELP----------DLDRLPAALE--ELDVLVLCNPN 135 (330)
T ss_pred HH-HHHHhCCC-eEEEeCCCcHHHHHH--------HHHcCCEEEEeC----------CHHHHHhhcc--cCCEEEEeCCC
Confidence 54 45557888 688888766555331 122343333322 7899998884 57777776 77
Q ss_pred c-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC-CCCCCeEEEEcCCCcc--cCCCcceEEeecccccc
Q 010058 235 A-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 307 (519)
Q Consensus 235 n-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~-p~~~~di~~~S~~K~l--~GprgG~i~~~~~~~~~ 307 (519)
| +|...+ +++|.++|+++|+++|+|+++............ .-...++++.|++|++ +|.|.|++++++
T Consensus 136 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~----- 210 (330)
T TIGR01140 136 NPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP----- 210 (330)
T ss_pred CCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCH-----
Confidence 7 888888 566778889999999999997522211011000 0013468999999986 456669999987
Q ss_pred cccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhH-HHHHHHHHHHHHHHHHHHHhcC-CEEecCCCC
Q 010058 308 NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEY-KAYQEQVLSNSSKFARSLLERG-YDLVSGGTE 385 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~ 385 (519)
++.+.+...... .+.+....+++...+ ...++ +..+++++++++.+.+.|++.+ +.+.. ..
T Consensus 211 ---------~~~~~l~~~~~~---~~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~ 273 (330)
T TIGR01140 211 ---------ALLARLREALGP---WTVNGPARAAGRAAL---ADTAWQAATRARLAAERARLAALLARLGGLEVVG--GT 273 (330)
T ss_pred ---------HHHHHHHhcCCC---CCchHHHHHHHHHHH---hchHHHHHHHHHHHHHHHHHHHHHHhCCCceECC--CC
Confidence 556655543221 122333333333333 34444 6778899999999999999986 55433 23
Q ss_pred cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 386 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 386 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
..+.|+.+. +..++.+.|.++||.+. |+.. +...+++|||++.. . .++ +++.++|
T Consensus 274 ~~f~~~~~~----~~~~l~~~l~~~gi~v~----pg~~f~~~~~~~iRi~~~~--~----~~~-~~~~~~l 329 (330)
T TIGR01140 274 ALFLLVRTP----DAAALHEALARRGILIR----DFDNFPGLDPRYLRFALPT--D----EEN-DRLEEAL 329 (330)
T ss_pred CeEEEEEcC----CHHHHHHHHHHCCEEEE----ECCCCCCCCCCEEEEEecC--H----HHH-HHHHHhh
Confidence 456677654 35678888888999996 5554 22235689998753 2 233 7766654
No 196
>PRK04311 selenocysteine synthase; Provisional
Probab=99.84 E-value=1.2e-18 Score=181.14 Aligned_cols=322 Identities=16% Similarity=0.160 Sum_probs=200.2
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHH
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG--NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYT 160 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~--~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~ 160 (519)
.+-+++|+++.+++.+++.+ |. +.......+ ...++.+| +.+++++|++. .+.++||+.|+..++.
T Consensus 93 lg~s~l~~~v~eav~~~~~~-~~--~le~~l~~g~~g~r~~~~e----~~lA~l~Gae~-----a~vv~sgtaAl~l~l~ 160 (464)
T PRK04311 93 LGRALLSEAAIEAVTEAARG-YS--NLEYDLATGKRGSRDRALA----ALLCALTGAED-----ALVVNNNAAAVLLALN 160 (464)
T ss_pred CCCCCCCHHHHHHHHHHHhc-cc--ccccchhhcccchHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHH
Confidence 34557899999999988765 42 111001001 12233444 88999999975 3888888888776664
Q ss_pred hhcCCCCEEEEecCCCcc---cccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cccc
Q 010058 161 ALLKPHERIMALDLPHGG---HLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASAY 236 (519)
Q Consensus 161 all~pGD~Vl~~~~~~~~---~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn~ 236 (519)
+ +.+||+|++++.++.. .+.... .+...|..+..+. . +...+++++++++++ +|++|++. ++|+
T Consensus 161 ~-l~~GdeVIvs~~e~~~~ggs~~i~~-----~~~~~G~~l~~v~--~---~~~t~~~dle~aI~~-~TklV~~vh~sN~ 228 (464)
T PRK04311 161 A-LAAGKEVIVSRGELVEIGGAFRIPD-----VMRQAGARLVEVG--T---TNRTHLRDYEQAINE-NTALLLKVHTSNY 228 (464)
T ss_pred H-hCCCCEEEEcchhhhhcCcchhhHH-----HHHHCCcEEEEEC--C---CCCCCHHHHHHhcCc-cCeEEEEEcCCCc
Confidence 4 6899999998765432 111101 1223354444442 2 234679999999987 89998887 6663
Q ss_pred -----cccccHHHHHHHHhhcCCEEEehhhhhhhccc----cCC--CC---CCCC-CCeEEEEcCCCcccCCCcceEEee
Q 010058 237 -----ARLYDYARIRKVCDKQKAVMLADMAHISGLVA----AGV--IP---SPFE-YADVVTTTTHKSLRGPRGAMIFFR 301 (519)
Q Consensus 237 -----g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~----~~~--~~---~p~~-~~di~~~S~~K~l~GprgG~i~~~ 301 (519)
+...|+++|.++|++||+++++|.+ +|.+. .++ .+ .++. ++|++++|+||+|+||.+|+++++
T Consensus 229 ~i~G~~~~~dl~eI~~lak~~gi~vivD~g--sG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~ 306 (464)
T PRK04311 229 RIEGFTKEVSLAELAALGKEHGLPVVYDLG--SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGK 306 (464)
T ss_pred cccccCCcCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEc
Confidence 3578999999999999999999985 33221 111 11 1222 799999999999999999999998
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh-----------HHHHHHHHHHHHHHHHH
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE-----------YKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~-----------~~~~~~~~~~~~~~l~~ 370 (519)
+ ++.+++...... ..-...-..++++.+.+.....+. +....++..++++.+.+
T Consensus 307 ~--------------~li~~l~~~~~~-r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~ 371 (464)
T PRK04311 307 K--------------ELIARLKKHPLK-RALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAA 371 (464)
T ss_pred H--------------HHHHHHhhchhH-HHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHH
Confidence 7 455444321100 001112344566666665332211 11223677789999999
Q ss_pred HHHhcC-----CEEec------CCCC--c--ceeeeeccCCCCcHHHHHHhhccc--CeEEcccccCCCCCCCCCCeEEe
Q 010058 371 SLLERG-----YDLVS------GGTE--N--HLVLVNLRNKGIDGSRVEKVLESV--HIAANKNTVPGDVSAMVPGGIRM 433 (519)
Q Consensus 371 ~L~~~g-----~~~~~------~~~~--~--~~~~v~~~~~~~~~~~~~~~L~~~--gI~v~~~~~p~~~~~~~~~~iRi 433 (519)
.|.... +.++. +|+. . ....+.+.+.+.+..++.+.|++. .|..+. ..+.+.+
T Consensus 372 ~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~----------~~~~~~l 441 (464)
T PRK04311 372 ALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRI----------EDGRLLL 441 (464)
T ss_pred HHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEE
Confidence 998762 23442 1221 1 223444555567788999999874 455541 1233443
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.-|-+.++|++.+++.|.+++.
T Consensus 442 -----d~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 442 -----DLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred -----EeCcCCHHHHHHHHHHHHHHhh
Confidence 3345558999999999988763
No 197
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.9e-19 Score=167.07 Aligned_cols=326 Identities=19% Similarity=0.258 Sum_probs=228.5
Q ss_pred eeecCCCCCC----cHHHHHHHhhHhhhccCCCCCCCCCCCCchh-HHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 79 LELIPSENFT----SVSVMQAVGSVMTNKYSEGYPGARYYGGNEY-IDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 79 i~L~a~en~~----~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~-~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
+++ ...|++ .|+|.++-.+++.. |..|..+.|+--|.+. ...|| ..++++.+-+. .++..+|..
T Consensus 70 lnF-caNnYLGLsshPeii~a~~~alee-yGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypscfd 138 (417)
T KOG1359|consen 70 LNF-CANNYLGLSSHPEIINAGQKALEE-YGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSCFD 138 (417)
T ss_pred eee-cccccccccCChHHHHHHHHHHHH-hCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEeccccc
Confidence 444 445654 68999999999877 8778777777656554 45566 88888888775 499999999
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHh---hhhCCcEEE
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSA---ALFRPKLIV 230 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i---~~~k~klIi 230 (519)
||..++.++++|.|.|+...+.|.+.+. ++.+.. ....+|+-.++..+ .+++-|+|+
T Consensus 139 ANag~feail~pedAvfSDeLNhASIId--------GirLck------------ry~h~dv~~l~~~l~~a~k~r~klv~ 198 (417)
T KOG1359|consen 139 ANAGAFEAILTPEDAVFSDELNHASIID--------GIRLCK------------RYRHVDVFDLEHCLISACKMRLKLVV 198 (417)
T ss_pred cchHHHHHhcChhhhhhccccccchhhh--------hhHHHh------------hhccchhHHHHHHHHHhhhheEEEEE
Confidence 9999999999999999988888877664 333321 12344554444332 234677887
Q ss_pred Ec--cccccccccHHHHHHHHhhcCCEEEehhhhhhhcccc---CCCC--CCCCCCeEEEEcCCCcccCCCcceEEeecc
Q 010058 231 AG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAA---GVIP--SPFEYADVVTTTTHKSLRGPRGAMIFFRKG 303 (519)
Q Consensus 231 ~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~---~~~~--~p~~~~di~~~S~~K~l~GprgG~i~~~~~ 303 (519)
.. .|.-|...|+++|.+++++||++|++|++|..|.... |... +-...+|++.++..|.++|..|||+.+++
T Consensus 199 TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~- 277 (417)
T KOG1359|consen 199 TDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK- 277 (417)
T ss_pred ecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh-
Confidence 76 6668999999999999999999999999999876532 1111 11236899999999999999999999999
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHH-HHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLA-VALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~-~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
.+...+...-.|.+.++...+.+.+++ .+++.+.. -.......+.+.+++++.+...|+.+...
T Consensus 278 -------------~li~llrqr~RpylFSnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~aGftIsg~ 342 (417)
T KOG1359|consen 278 -------------PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAAGFTISGA 342 (417)
T ss_pred -------------hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCceecCC
Confidence 555555555566666554444433332 33443322 24556777888999999988889988542
Q ss_pred CCCccee-eeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 383 GTENHLV-LVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 383 ~~~~~~~-~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+|.. -+.+.... -+..+.+.|.+.||.|-..+.|- .|.+...||+...+..+ ++|++++++++.++.+.
T Consensus 343 ---~hPI~pv~lGda~-lA~~~ad~lLk~Gi~Vigfs~Pv--VP~gkariRVqiSAaHt----~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 343 ---SHPICPVMLGDAR-LASKMADELLKRGIYVIGFSYPV--VPKGKARIRVQISAAHT----EEDIDRLIEAFSEVGRF 412 (417)
T ss_pred ---CCCccceecccHH-HHHHHHHHHHhcCceEEeecCCc--CCCCceEEEEEEehhcC----HHHHHHHHHHHHHHHHh
Confidence 2322 22222111 23456677778999985332222 34455679999999999 99999999999998763
No 198
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.84 E-value=2.4e-19 Score=184.43 Aligned_cols=289 Identities=15% Similarity=0.135 Sum_probs=186.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
....++| +.+++++|.+. .|.+.||+.|+.+++.++++|||+|++.++.|++.......... ..|..
T Consensus 61 pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~----~~gi~ 127 (386)
T PRK06767 61 PTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEE----KFMIT 127 (386)
T ss_pred cchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHh----hcCeE
Confidence 4456777 88899999764 59999999888888899999999999998777665432211100 01221
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
...+ ...|++++++++.+ +|++|+++ ++| +|...|+++|.++|+++|+++++|+++..+.... |
T Consensus 128 ~~~~--------~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~-----p 193 (386)
T PRK06767 128 HSFC--------DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQR-----P 193 (386)
T ss_pred EEEe--------CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCC-----c
Confidence 1111 12488999999987 89999988 666 7899999999999999999999999986554332 2
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|++++|++|+++|+. ||+++++++ ...++.........+..+... ++ .++..+.
T Consensus 194 l~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~--------------~i~~~~~~~~~~~g~~~~~~~-a~--l~~~~L~- 255 (386)
T PRK06767 194 LELGCDAVVHSATKYIGGHGDVVAGVTICKTR--------------ALAEKIRPMRKDIGGIMAPFD-AW--LLLRGLK- 255 (386)
T ss_pred hhcCCcEEEecCcceecCCCCceeEEEEeChH--------------HHHHHHHHHHHHhCCCCCHHH-HH--HHHcCCC-
Confidence 22 78999999999998765 699998873 222221111111111122111 11 2233332
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc-CCEEec-CCC---------CcceeeeeccCCCCcHHHHHHhhcccCeEEcccc--
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER-GYDLVS-GGT---------ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNT-- 418 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~---------~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-- 418 (519)
......++..++++.+++.|++. ++..+. |.. .+.++.+.+.....+...+.+.|+..++.++-..
T Consensus 256 -tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~ 334 (386)
T PRK06767 256 -TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTE 334 (386)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcC
Confidence 34567788899999999999998 776443 211 1234444443211235567777877787776421
Q ss_pred ----cCCCC-----CC-------CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 419 ----VPGDV-----SA-------MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 419 ----~p~~~-----~~-------~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.|... ++ ..++-||+|.+ -||.+.+++-|.+++.
T Consensus 335 sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG--------lE~~~dl~~dl~~al~ 384 (386)
T PRK06767 335 TLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG--------LESWEDIVSDLEQALK 384 (386)
T ss_pred ccccCCCccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 12211 00 12456899876 3677777777777664
No 199
>PRK15029 arginine decarboxylase; Provisional
Probab=99.84 E-value=5e-19 Score=191.30 Aligned_cols=299 Identities=16% Similarity=0.126 Sum_probs=202.0
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 125 SLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
.++++.++++||++. ...+++||+ +|.++++++++|||+|++...+|-+.+. ++.++|..+.++.-
T Consensus 208 ~eAq~~aA~~fgA~~-----t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~--------al~L~ga~Pvyl~P 274 (755)
T PRK15029 208 GESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLILTGAKPVYMVP 274 (755)
T ss_pred HHHHHHHHHHhCCCc-----EEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeEEEecc
Confidence 456699999999987 388899998 9999999999999999988866655554 45566766666532
Q ss_pred eeCCCC---CCCC-----HHHHHHHhhhh---------CCcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhh
Q 010058 204 RLDEST---GYID-----YEQLEKSAALF---------RPKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 204 ~~d~~~---~~iD-----~d~l~~~i~~~---------k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g 265 (519)
..+ +. +.++ ++.|++++.++ +|++++++.++ +|...|++.|.++|++++++|++|+||.+-
T Consensus 275 ~~~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah 353 (755)
T PRK15029 275 SRN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_pred ccc-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECccccc
Confidence 222 22 2344 89999988652 23377787445 899999999999999999999999999764
Q ss_pred ccccCCCC--CCC-------CCCe-EEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCc
Q 010058 266 LVAAGVIP--SPF-------EYAD-VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGP 334 (519)
Q Consensus 266 ~~~~~~~~--~p~-------~~~d-i~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~ 334 (519)
+......| +++ .++| +++-|+||+|++... ++|..+.... .+ + .++++.+..-...++|
T Consensus 354 ~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~-------~i--d-~~r~~~~l~~~qSTSP 423 (755)
T PRK15029 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRG-------AI--N-FSRFNQAYMMHATTSP 423 (755)
T ss_pred cccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCcc-------cc--C-HHHHHHHHHHHcCCCc
Confidence 43322222 333 3688 999999999998877 6887765310 00 1 1334444333334789
Q ss_pred cHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C-------------------------------------
Q 010058 335 HNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G------------------------------------- 376 (519)
Q Consensus 335 ~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------------------------------------- 376 (519)
+...++++..|..++....-++..++..+.+..+++.|.+. +
T Consensus 424 SY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 503 (755)
T PRK15029 424 LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLL 503 (755)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhh
Confidence 99999999999988765334556677777777788877665 3
Q ss_pred -----CEEecCC-C--------------CcceeeeeccCCCCcHH---------HHHHhhcccCeEEcccccCCCCCCCC
Q 010058 377 -----YDLVSGG-T--------------ENHLVLVNLRNKGIDGS---------RVEKVLESVHIAANKNTVPGDVSAMV 427 (519)
Q Consensus 377 -----~~~~~~~-~--------------~~~~~~v~~~~~~~~~~---------~~~~~L~~~gI~v~~~~~p~~~~~~~ 427 (519)
+.++.++ . |.-=+++.+...+.++. ++.+.|+++||.+.+. +
T Consensus 504 ~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~---~------ 574 (755)
T PRK15029 504 TTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT---T------ 574 (755)
T ss_pred ccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEec---C------
Confidence 2222110 0 11112333333345555 8999998899999642 1
Q ss_pred CCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 428 PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 428 ~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
...+=+ +.+.|.++++++++++.|.++-+
T Consensus 575 ~~~vL~----l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 575 DFQIMF----LFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred CCeEEE----EeCCCCCHHHHHHHHHHHHHHHH
Confidence 122322 33345558999999999988744
No 200
>PLN02880 tyrosine decarboxylase
Probab=99.83 E-value=2.4e-18 Score=180.98 Aligned_cols=320 Identities=13% Similarity=0.090 Sum_probs=196.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCC----cceEEeCCcHHHHHHHHHhhc----C------CCC-EEEEecCCCcccccc
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKW----GVNVQSLSGSPANFQVYTALL----K------PHE-RIMALDLPHGGHLSH 182 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~----~~~V~~~sGs~a~~~~~~all----~------pGD-~Vl~~~~~~~~~~~~ 182 (519)
....++|+.+.+|+++++|.+.+.| +..++.++||.+|+.++.+.- + ... .|++++..|.+...
T Consensus 118 p~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~K- 196 (490)
T PLN02880 118 PAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQK- 196 (490)
T ss_pred cccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHH-
Confidence 4567899999999999999975422 123443344448876555431 1 112 33444544444322
Q ss_pred cccccCCceeeeeee---eEEEeeeeCC-CCCCCCHHHHHHHhhhh-----CCcEEEEc--cccccccccHHHHHHHHhh
Q 010058 183 GYQTDTKKISAVSIF---FETMPYRLDE-STGYIDYEQLEKSAALF-----RPKLIVAG--ASAYARLYDYARIRKVCDK 251 (519)
Q Consensus 183 ~~~~~~~~v~~~g~~---~~~v~~~~d~-~~~~iD~d~l~~~i~~~-----k~klIi~~--~sn~g~~~d~~~i~~ia~~ 251 (519)
.+.+.|.. ++.|| .|. +++.+|+++|++++.+. .|-+|+.+ .+++|...|+++|+++|++
T Consensus 197 -------aa~~lGlg~~~v~~Vp--~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~ 267 (490)
T PLN02880 197 -------ACQIAGIHPENCRLLK--TDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKS 267 (490)
T ss_pred -------HHHHcCCCHHHEEEee--cCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHH
Confidence 34455653 44555 442 35789999999998642 25566665 4448999999999999999
Q ss_pred cCCEEEehhhhhhhccccCCC---CCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccc-ccccCcchhhhHHHH-----
Q 010058 252 QKAVMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE-INKQGQEVMYAYEDK----- 321 (519)
Q Consensus 252 ~~~~livD~ah~~g~~~~~~~---~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~-~~~~g~~~~~~~~~~----- 321 (519)
+|+|++||+||..+....... -..++.+|.++.+.|||+..|.+ |++++++.... .+..-.. ++...
T Consensus 268 ~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~---~Yl~~~~~~~ 344 (490)
T PLN02880 268 NGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNP---EFLKNKASQA 344 (490)
T ss_pred cCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCH---HHhcCccccc
Confidence 999999999987765433211 12234789999999999999999 99999863211 1100000 00000
Q ss_pred ---hhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCC
Q 010058 322 ---INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKG 397 (519)
Q Consensus 322 ---i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~ 397 (519)
.+...+ ..+.+... ....+...++.+...++.++.++..++++++.+.|++. +++++.+.. ..++.+.+.+.+
T Consensus 345 ~~~~~~~~~-~i~~~rr~-~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~-~~iv~Fr~~~~~ 421 (490)
T PLN02880 345 NSVVDYKDW-QIPLGRRF-RSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRI-FSLVCFRLVPPK 421 (490)
T ss_pred cCCCChhcc-CcCCCCcc-cHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc-eEEEEEEEeCCC
Confidence 000000 00111111 12344556777777788888888889999999999887 899887643 233344433322
Q ss_pred CcH-------HHHHHhhc-ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 398 IDG-------SRVEKVLE-SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 398 ~~~-------~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.+. ..+.+.|. +..+.+....+.| ..++|+++..+.| +++|++.+.+.|.++....
T Consensus 422 ~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g------~~~lR~~~~n~~t---t~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 422 NNEDNGNKLNHDLLDAVNSSGKIFISHTVLSG------KYVLRFAVGAPLT---EERHVTAAWKVLQDEASKL 485 (490)
T ss_pred CChhhHHHHHHHHHHHHHhCCCEEEEEEEECC------EEEEEEEecCCCC---CHHHHHHHHHHHHHHHHHH
Confidence 221 22434443 3556664322222 3579999876665 2799999999998887643
No 201
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.83 E-value=6.9e-19 Score=180.96 Aligned_cols=216 Identities=15% Similarity=0.145 Sum_probs=150.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+....+| +.+++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++.+..... .....|..
T Consensus 59 p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~----~~~~~G~~ 125 (391)
T TIGR01328 59 PTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEH----ALTKFGIQ 125 (391)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHH----HHhcCCeE
Confidence 4566777 88999999876 48889998898889999999999999998777655432211 11223444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ .+ |++++++++.+ +|++|+++ ++| +|...|+++|.++|+++|+++++|+++..+.... |
T Consensus 126 ~~~vd--~~------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-----~ 191 (391)
T TIGR01328 126 VDFIN--MA------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN-----P 191 (391)
T ss_pred EEEEC--CC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC-----c
Confidence 44432 21 79999999887 89999988 777 7899999999999999999999999987664422 2
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|++++|.+|+++|+. ||++++++ ++.+++.........|+......++ .++..+.
T Consensus 192 ~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~--------------~li~~l~~~~~~~~~g~~l~~~~a~--l~l~~L~- 254 (391)
T TIGR01328 192 VALGVDVVVHSATKYIGGHGDVVAGLICGKA--------------ELLQQIRMVGIKDMTGSVISPFDAW--LILRGLK- 254 (391)
T ss_pred hhcCCCEEEccccccccCCCCceEEEEEcCH--------------HHHHHHHHHHHHhCCCCCCCcHHHH--HHHhCcC-
Confidence 22 78999999999998654 58888776 4444443211111112111111222 2233332
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
.+....++..+|++.+.+.|++. ++.
T Consensus 255 -tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 255 -TLNIRMKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 35666888999999999999987 443
No 202
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.83 E-value=1.3e-18 Score=193.83 Aligned_cols=310 Identities=17% Similarity=0.157 Sum_probs=207.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh----cCCCC----EEEEecCCCcccccccccccCC
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL----LKPHE----RIMALDLPHGGHLSHGYQTDTK 189 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al----l~pGD----~Vl~~~~~~~~~~~~~~~~~~~ 189 (519)
++..+++...++++++++|.+. +.++..+|+.++++.+.++ .++|| +|++++..|+++...
T Consensus 538 qG~l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s------- 606 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS------- 606 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH-------
Confidence 3456777788899999999985 4566556666775544444 36776 589998888776432
Q ss_pred ceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEc-ccccccc-ccHHHHHHHHhhcCCEEEehhhhhhh
Q 010058 190 KISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAG-ASAYARL-YDYARIRKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 190 ~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~-~sn~g~~-~d~~~i~~ia~~~~~~livD~ah~~g 265 (519)
....|..++.++. + .++.+|+++|++++.++ ++.+|++. ++.+|.. .|+++|+++|+++|+++++|+||..+
T Consensus 607 -a~~~G~~vv~v~~--d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 607 -AVMAGMKVVVVAC--D-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred -HHHCCCEEEEECC--C-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhh
Confidence 2334655555553 4 35899999999999764 45666666 4446654 68999999999999999999999866
Q ss_pred ccccCCCCCC-CCCCeEEEEcCCCcccCCCc------ceEEeeccccccc-ccCcchhhhHHHHhhhcccCCCCCCcc--
Q 010058 266 LVAAGVIPSP-FEYADVVTTTTHKSLRGPRG------AMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPH-- 335 (519)
Q Consensus 266 ~~~~~~~~~p-~~~~di~~~S~~K~l~Gprg------G~i~~~~~~~~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~-- 335 (519)
++... .| .-++|++++++||||++|.| |++.+++.+ .+ ..|...... ......|...
T Consensus 683 l~~l~---~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l--~p~lpg~~v~~~--------~~~~~~g~v~ta 749 (954)
T PRK05367 683 QVGLA---RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHL--APFLPGHPVQIA--------GGETGIGAVSAA 749 (954)
T ss_pred ccCCC---ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccc--cccCCCCccCcC--------CCCCCcCcchhH
Confidence 55432 12 12799999999999876654 578887632 22 112110000 0000011111
Q ss_pred -H-HHHHH--HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC---CCCcceeeeeccCC----CCcHHHHH
Q 010058 336 -N-HTISG--LAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG---GTENHLVLVNLRNK----GIDGSRVE 404 (519)
Q Consensus 336 -~-~~iaa--l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~~v~~~~~----~~~~~~~~ 404 (519)
. ....+ ....+..+...++++..++...+++++++.|.+. +++... +...|-+++++.+. +++..++.
T Consensus 750 ~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~-~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~ 828 (954)
T PRK05367 750 PFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH-YPVLYTGANGRVAHECILDLRPLKESTGITVDDIA 828 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh-cCccccCCCCCcccceEEEeecccccCCCCHHHHH
Confidence 1 11111 2234455666778888888889999999999874 444332 12345566776421 45678899
Q ss_pred HhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 010058 405 KVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIK 466 (519)
Q Consensus 405 ~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~ 466 (519)
+.|.++||.......| ..+.+||++...++ .+|++++++++..+.....++.
T Consensus 829 krL~d~G~~~~t~~~p------v~~~l~i~ptE~~s----~~elDr~~~al~~i~~e~~~~~ 880 (954)
T PRK05367 829 KRLIDYGFHAPTMSFP------VAGTLMVEPTESES----KAELDRFCDAMIAIRAEIDEVE 880 (954)
T ss_pred HHHHHCCCeEeecCCc------cCCEEEEEeeecCC----HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999988531122 25789999999888 8999999999999988877764
No 203
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.83 E-value=5.7e-19 Score=182.02 Aligned_cols=219 Identities=18% Similarity=0.179 Sum_probs=149.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
.....+| +.+++++|++++ +.+.||+.|+..++.++++|||+|++++..++++....... ....|..
T Consensus 65 p~~~~Le----~~lA~l~G~~~~-----~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~----~~~~G~~ 131 (398)
T PRK07504 65 PTVDMFE----KRMCALEGAEDA-----RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETL----LPRYGIE 131 (398)
T ss_pred chHHHHH----HHHHHHhCCCee-----eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHH----HhhcCeE
Confidence 4456666 888899999873 56789988888788889999999999998777764322110 0112333
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..+ + .+|++++++++++ +||+|+++ ++| +|...|+++|.++|+++|+++++|++|..+... .|
T Consensus 132 v~~v----d----~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~-----~~ 197 (398)
T PRK07504 132 STLV----D----GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ-----KP 197 (398)
T ss_pred EEEE----C----CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC-----Cc
Confidence 3332 2 3789999999987 89999998 677 789999999999999999999999998766542 23
Q ss_pred CC-CCeEEEEcCCCcccCC--C-cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGP--R-GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gp--r-gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|++++|+||+++|+ + ||+++++++ .+.+++...... .|. .+..+.+ +.++..+.
T Consensus 198 ~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~-------------~i~~~~~~~~~~--~g~-~~s~~~A-~~~l~~L~- 259 (398)
T PRK07504 198 LELGAHIVVYSATKHIDGQGRCLGGVVLSDKA-------------WIEEHLQDYFRH--TGP-SLSPFNA-WTLLKGLE- 259 (398)
T ss_pred hhhCCCEEEeeccccccCCccceEEEEEeCcH-------------HHHHHHHHHHHH--hCC-CCCHHHH-HHHHhccc-
Confidence 33 6899999999999764 3 478877763 222222211000 121 1111111 22333333
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc-CCE-EecC
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER-GYD-LVSG 382 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~ 382 (519)
.+....++..+|+..+.+.|++. ++. +..|
T Consensus 260 -tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp 291 (398)
T PRK07504 260 -TLPVRVRQQTESAAAIADFLAGHPKVARVIYP 291 (398)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 36777888889999999999987 443 4434
No 204
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.83 E-value=1.1e-18 Score=180.16 Aligned_cols=290 Identities=15% Similarity=0.204 Sum_probs=185.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
....++| +.+++++|.+. .+.++||+.|+.+++.++++|||+|+++++.|++....... .+...|..
T Consensus 64 p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~----~~~~~G~~ 130 (400)
T PRK06234 64 PTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNH----GLTRYGVE 130 (400)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHH----HHhhCCeE
Confidence 4566777 88888999753 48888888888888999999999999998777665432210 12233544
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~ 273 (519)
+..++ . .|++++++++++ +||+|+++ ++| +|...|+++|.++|+++ |+++++|+++..+...
T Consensus 131 v~~vd--~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~----- 196 (400)
T PRK06234 131 VTFVD--T------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ----- 196 (400)
T ss_pred EEEEC--C------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC-----
Confidence 44432 1 279999999987 89999998 777 89999999999999997 9999999998766432
Q ss_pred CCCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh
Q 010058 274 SPFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV 349 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~ 349 (519)
.|+. ++|++++|++|+++|+. +|++++++ ++.+.+.........|....+..+ +.++..+
T Consensus 197 ~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~--------------~~~~~l~~~~~~~~~g~~l~p~~a--~l~~~~l 260 (400)
T PRK06234 197 RPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE--------------EFINQVKLFGIKDMTGSVIGPFEA--FLIIRGM 260 (400)
T ss_pred CchhhCCcEEEeeccccccCCCCceeEEEEecH--------------HHHHHHHHHHHHHhcCCCCCHHHH--HHHHhcc
Confidence 2232 68999999999997654 59999887 444443321111111221111112 1223333
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHHhc-CC-EEecCCC---------------CcceeeeeccCCCC-cHHHHHHhhcccC
Q 010058 350 KTPEYKAYQEQVLSNSSKFARSLLER-GY-DLVSGGT---------------ENHLVLVNLRNKGI-DGSRVEKVLESVH 411 (519)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~---------------~~~~~~v~~~~~~~-~~~~~~~~L~~~g 411 (519)
. .+....++..+|+..+.+.|++. .+ .+..++- .++++.+.+.. +. ....+.+.|+-.+
T Consensus 261 ~--tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~-~~~~~~~f~~~l~~~~ 337 (400)
T PRK06234 261 K--TLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG-GVEEGKVVMNNVKLAT 337 (400)
T ss_pred C--cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhCCcce
Confidence 3 35667788889999999999887 23 2322221 12334444431 11 1334556666666
Q ss_pred eEEcccc------cCCCCC--C----------CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 412 IAANKNT------VPGDVS--A----------MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 412 I~v~~~~------~p~~~~--~----------~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+.++-.. .|...+ . ..++-||+|.+. ||.+.+++-|.+++..
T Consensus 338 ~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--------E~~~dl~~dl~~al~~ 397 (400)
T PRK06234 338 LAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL--------EDVDDIIADLKQALDL 397 (400)
T ss_pred EeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC--------CCHHHHHHHHHHHHHH
Confidence 6665321 122110 0 124679998773 6777777777777753
No 205
>PLN02452 phosphoserine transaminase
Probab=99.83 E-value=1.4e-18 Score=175.91 Aligned_cols=343 Identities=15% Similarity=0.114 Sum_probs=217.3
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCC--CCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGY--PGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPAN 155 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~--p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~ 155 (519)
.+++.|++..+|++|++++...+.+.-..|. ..-.+ .+ +...++-+.+++.++++++++.+ |.+-+..++|+.++
T Consensus 8 ~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sH-Rs-~~f~~i~~~~~~~L~~l~~~p~~-y~v~~l~Gsgt~~~ 84 (365)
T PLN02452 8 VFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSH-RG-KEFLSIIQKAEADLRELLDIPDN-YEVLFLQGGASTQF 84 (365)
T ss_pred eEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCC-Cc-hHHHHHHHHHHHHHHHHhCCCCC-ceEEEEeCccHHHH
Confidence 4789999999999999999998765221121 11111 12 33345666788999999998433 31322224444589
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA 235 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn 235 (519)
.++...++.+||++++.. .|.++..+. +.+...|........+....+..+|+++++. . .+.+.|.++.++
T Consensus 85 ea~~~nl~~~~~~~l~~~---~G~fg~r~~---~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~hnE 155 (365)
T PLN02452 85 AAIPLNLCKPGDKADFVV---TGSWSKKAA---KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--T-PDAKFVHICANE 155 (365)
T ss_pred HHHHHhcCCCCCeEEEEE---CCHHHHHHH---HHHHHhCCCcEEEecCCCCCCCCCChHHcCC--C-CCCcEEEECCCC
Confidence 999999999999999876 333222111 0111223211111101111112567776532 2 256788777444
Q ss_pred --cccc-ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--cccc
Q 010058 236 --YARL-YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINK 309 (519)
Q Consensus 236 --~g~~-~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~ 309 (519)
+|.. .|++++. ++++++|+++..|..+.++... ++..+|.||++ ||.| |+++++++.. ..+.
T Consensus 156 TstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~-----~v~~~saqK~l-GP~Gl~~v~vr~~~l~~~~~~ 223 (365)
T PLN02452 156 TIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKY-----GVIYAGAQKNV-GPSGVTIVIIRKDLIGNARPI 223 (365)
T ss_pred CCCcEecCcccccC------CCeEEEECCccccCcccCHHHc-----CEEEEeccccc-CCCCeEEEEEcHHHHhhcccC
Confidence 6874 6776654 3899999999998888776655 44557999988 7998 9999988642 1111
Q ss_pred cCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhc-CC-EEecCCCCc
Q 010058 310 QGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLER-GY-DLVSGGTEN 386 (519)
Q Consensus 310 ~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~ 386 (519)
.. ...++....+.. ...+||+.+.+.++..+++++.+. +++.+.++.+++++++++.|++. |+ ....+....
T Consensus 224 ~~--~~~~~~~~~~~~---s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~r 298 (365)
T PLN02452 224 TP--GMLDYKIHAEND---SLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVR 298 (365)
T ss_pred CC--chhhHHHHHhcC---CccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHh
Confidence 11 111221111111 233799999999999999998875 79999999999999999999986 76 111111112
Q ss_pred ceeeeeccCCCC-cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 387 HLVLVNLRNKGI-DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 387 ~~~~v~~~~~~~-~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
....+.+...+. ..+++.+.++++|+.. ++|+.+ -+++|+|.-.-.+ .++++.+++++++..+
T Consensus 299 s~~~vsF~~~~~~~~~~f~~~~~~~g~~~----~~G~r~---~gg~R~s~yna~~----~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 299 SLMNVPFTLGGSELEAEFVKEAAKAGMVQ----LKGHRS---VGGMRASIYNAMP----LAGVEKLVAFMKDFQA 362 (365)
T ss_pred CCeEEEEEcCCchhHHHHHHHHHHCCCcc----cCCccc---cCceEEECcCCCC----HHHHHHHHHHHHHHHH
Confidence 233444433222 3556788889999998 467653 2359999765555 8999999999988654
No 206
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.83 E-value=2.7e-18 Score=173.30 Aligned_cols=262 Identities=18% Similarity=0.169 Sum_probs=170.1
Q ss_pred HHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC
Q 010058 129 KRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE 207 (519)
Q Consensus 129 ~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~ 207 (519)
+.+++.+|.+ +|++|+|++ ++..++ .+.|||+|++.++++..+.. .+...|..+..++
T Consensus 56 ~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~--------~~~~~g~~~~~v~----- 114 (330)
T PRK05664 56 AAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAH--------AWRRAGHQVRELD----- 114 (330)
T ss_pred HHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHH--------HHHHcCCeEEEec-----
Confidence 7777778854 499999998 665443 46899999999976655543 2334455444443
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHH---HHHHHHhhcCCEEEehhhhhhhcccc-CCCCCCCCC-Ce
Q 010058 208 STGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYA---RIRKVCDKQKAVMLADMAHISGLVAA-GVIPSPFEY-AD 280 (519)
Q Consensus 208 ~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~---~i~~ia~~~~~~livD~ah~~g~~~~-~~~~~p~~~-~d 280 (519)
.+++++.+. ++++++++ |+| +|...+.+ +|.++|+++|++||+|+++... ... ..... ..+ --
T Consensus 115 ------~~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~-~~~~s~~~~-~~~~~v 184 (330)
T PRK05664 115 ------EAEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN-TPQHSLAAC-AHRPGL 184 (330)
T ss_pred ------hhhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC-CCccccccc-ccCCCE
Confidence 234555553 67776666 877 88877755 5555568899999999986422 110 00000 011 23
Q ss_pred EEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHH
Q 010058 281 VVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQ 358 (519)
Q Consensus 281 i~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~ 358 (519)
+++.|++|.+ +|.|.||+++++ ++.+.+.....+. +.+.....+...++.. ....+..+
T Consensus 185 i~~~SfSK~~gl~GlRiG~~v~~~--------------~l~~~~~~~~~~~---~~~~~~~~~~~~~L~~--~~~~~~~~ 245 (330)
T PRK05664 185 IVLRSFGKFFGLAGARLGFVLAEP--------------ALLRALAELLGPW---TVSGPTRWLAQAALAD--TPWQRRQR 245 (330)
T ss_pred EEEeeccccccCCCcceEEEEeCH--------------HHHHHHHHhcCCC---CCCHHHHHHHHHHHhC--hHHHHHHH
Confidence 7888999976 788999999987 5666555443222 1223333344445542 22346678
Q ss_pred HHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcc
Q 010058 359 EQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPAL 438 (519)
Q Consensus 359 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ 438 (519)
+++.++++.+.+.|++.|+... +....++|+.+. +..++.+.|.++||.++. .. .+++|||++..
T Consensus 246 ~~~~~~r~~l~~~L~~~~~~~~--~~~~~f~~~~~~----~~~~~~~~l~~~gi~v~~----f~----~~~~iRis~~~- 310 (330)
T PRK05664 246 ERLLAASQRLAALLRRHGLTPA--GGCALFQWVRTE----DAAALHEFLARRGILTRL----FE----QPASLRFGLPA- 310 (330)
T ss_pred HHHHHHHHHHHHHHHHCCCccc--CCcceEEEEecC----CHHHHHHHHHHCCeEEEE----CC----CCCeEEEECCC-
Confidence 8889999999999999886432 222234455431 567888889999999962 11 23689999764
Q ss_pred ccCCCCHHHHHHHHHHHHHHHH
Q 010058 439 TSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 439 ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+ .++++++.+.|+++..
T Consensus 311 -~----~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 311 -D----EADWARLDQALLAYRK 327 (330)
T ss_pred -C----HHHHHHHHHHHHHHHh
Confidence 3 6889999999987654
No 207
>PLN02242 methionine gamma-lyase
Probab=99.82 E-value=1.4e-18 Score=179.77 Aligned_cols=225 Identities=14% Similarity=0.095 Sum_probs=153.3
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
++....++| +.+++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|+++....... .....|
T Consensus 74 ~~Pt~~~LE----~~lA~l~g~~~-----~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~---~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLG----RQMAALEGTEA-----AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHF---LPRKCN 141 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHh---hhhccC
Confidence 345667777 88899999976 266777777999899999999999999887766553311100 011223
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+..+ + ..|++++++++++.++|+|+++ ++| +|...|+++|+++|+++|++||+|++|..... +...
T Consensus 142 ~~~~~~----d----~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~--~~~~ 211 (418)
T PLN02242 142 ITTTFV----D----ITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL--SPAR 211 (418)
T ss_pred ceEEEc----C----CCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC--CHHH
Confidence 333222 1 1389999999976359999988 777 88999999999999999999999999753221 1111
Q ss_pred CCCCCCeEEEEcCCCcccCC--C-cceEEeecccccccccCcchhhhHHHHhhhcccC--CCCCCccHHHHHHHHHHHHH
Q 010058 274 SPFEYADVVTTTTHKSLRGP--R-GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFP--GLQGGPHNHTISGLAVALKQ 348 (519)
Q Consensus 274 ~p~~~~di~~~S~~K~l~Gp--r-gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~--~~~g~~~~~~iaal~~al~~ 348 (519)
. ++|++++|++|++.|+ + ||++++++ ++.+.+...... ...|.+.....+++. ++ .
T Consensus 212 ~---g~divv~S~SK~l~g~g~~~gG~iv~~~--------------~li~~l~~~~~~~~~~~g~~~~~~~A~l~-~~-~ 272 (418)
T PLN02242 212 L---GADVVVHSISKFISGGADIIAGAVCGPA--------------ELVNSMMDLHHGALMLLGPTMNPKVAFEL-SE-R 272 (418)
T ss_pred c---CCcEEEEeCccccCCCCCceEEEEEcCH--------------HHHHHHHHHhhhhhhccCCCCCHHHHHHH-Hc-C
Confidence 1 5899999999998654 3 69999877 444444322110 112333333333322 22 1
Q ss_pred hcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Q 010058 349 VKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGG 383 (519)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 383 (519)
...+....++..++++.+++.|++.++++..|+
T Consensus 273 --l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~ 305 (418)
T PLN02242 273 --LPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPG 305 (418)
T ss_pred --CCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCC
Confidence 224566778999999999999999998887654
No 208
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.82 E-value=4.9e-18 Score=186.09 Aligned_cols=316 Identities=16% Similarity=0.129 Sum_probs=213.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc--------CCCCEEEEecCCCcccccccccccCC
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL--------KPHERIMALDLPHGGHLSHGYQTDTK 189 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all--------~pGD~Vl~~~~~~~~~~~~~~~~~~~ 189 (519)
++..+++...++|+++++|.+. +.+++.+|+.++.+.++++- ...++|+++...|+.... +
T Consensus 526 qG~lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--s----- 594 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--S----- 594 (939)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--H-----
Confidence 4566777788899999999985 46899999987776555552 234678888888877632 2
Q ss_pred ceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh--hCCcEEEEc-ccccccccc-HHHHHHHHhhcCCEEEehhhhhhh
Q 010058 190 KISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL--FRPKLIVAG-ASAYARLYD-YARIRKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 190 ~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~--~k~klIi~~-~sn~g~~~d-~~~i~~ia~~~~~~livD~ah~~g 265 (519)
....|..++.++ .| +++.+|+++|++++++ .++++|++. ++++|...+ +++|+++|+++|.++++|+|+..+
T Consensus 595 -a~~~G~~Vv~V~--~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~a 670 (939)
T TIGR00461 595 -AAMAGMQVVPVN--CD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNA 670 (939)
T ss_pred -HHHCCCEEEEec--cC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhh
Confidence 223455555555 44 5689999999999985 378899888 777887766 999999999999999999998765
Q ss_pred ccccCCCCCCCCCCeEEEEcCCCcccC-----CCc-ceEEeeccccccc-ccCcchh--hhH---HHHhhhcccCCCCCC
Q 010058 266 LVAAGVIPSPFEYADVVTTTTHKSLRG-----PRG-AMIFFRKGVKEIN-KQGQEVM--YAY---EDKINQAVFPGLQGG 333 (519)
Q Consensus 266 ~~~~~~~~~p~~~~di~~~S~~K~l~G-----prg-G~i~~~~~~~~~~-~~g~~~~--~~~---~~~i~~~~~~~~~g~ 333 (519)
+...... .--++|++++|.||+|.+ ++| |++.+++.+ .+ ..|.... .+. .+.+. ....- ..
T Consensus 671 l~~l~~P--g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L--~~~lPg~~v~~t~d~~greq~Ig-a~s~~--~~ 743 (939)
T TIGR00461 671 QVGLTSP--GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHL--IPFLPKHDVVSMITGIGGSKSIG-SVSAA--PY 743 (939)
T ss_pred CCCCCCc--cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhc--hhhcCCCcccccccCCCCccccc-ccccc--cc
Confidence 5432211 011799999999999874 444 899998753 22 2222110 000 00010 00000 01
Q ss_pred ccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC---CcceeeeeccC----CCCcHHHHHHh
Q 010058 334 PHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGT---ENHLVLVNLRN----KGIDGSRVEKV 406 (519)
Q Consensus 334 ~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~~~~~v~~~~----~~~~~~~~~~~ 406 (519)
-+........+.+..+...++++..++...|++++++.|.+ +++++.++. ..|-+++++++ .+++..++.+.
T Consensus 744 g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakr 822 (939)
T TIGR00461 744 GSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKR 822 (939)
T ss_pred CcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHH
Confidence 11222223345567777788999999999999999999988 677766532 23446677653 24677889999
Q ss_pred hcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 010058 407 LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIK 466 (519)
Q Consensus 407 L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~ 466 (519)
|.+.|+..-..+. | ..+.+=|.....++ .+|+|++++++.++-....++.
T Consensus 823 L~d~G~hapt~~~-----p-v~g~lmiepTE~es----keelD~f~~al~~I~~e~~~~~ 872 (939)
T TIGR00461 823 LQDYGFHAPTLSF-----P-VPGTLMVEPTESES----LEELDRFCDAMIAIKEEINALV 872 (939)
T ss_pred HHhCCeeccccCC-----c-cCCeEEEEeeccCC----HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998632111 1 22344444444555 8999999999999888777764
No 209
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=1.8e-18 Score=177.17 Aligned_cols=290 Identities=17% Similarity=0.172 Sum_probs=186.6
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
+...+.+| +++++++|.+. .+.++||++|+.+++. +++|||+|++++..|++........ ....|.
T Consensus 46 ~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~----~~~~G~ 111 (378)
T TIGR01329 46 NPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQV----VPRSGV 111 (378)
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHH----HHHcCc
Confidence 34456666 88889999854 4888889887765554 8899999999988877654322110 111244
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
.+..++ . .|++++++++++ ++|+|+++ ++| +|...|+++|.++|+++|+++++|++|..+... .
T Consensus 112 ~v~~vd--~------~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~-----~ 177 (378)
T TIGR01329 112 VVVHVD--T------TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLC-----N 177 (378)
T ss_pred EEEEeC--C------CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC-----C
Confidence 444432 1 379999999986 89999998 777 889999999999999999999999998666432 2
Q ss_pred CCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 275 PFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
|+. ++|++++|.||++.|+. +|+++++++ ++.+++...... .|......-+ +..+..+
T Consensus 178 ~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-------------~~~~~~~~~~~~--~G~~~~~~~a--~l~~~~l- 239 (378)
T TIGR01329 178 PLELGADIVYHSATKFLAGHSDVMAGVLAVKGE-------------EIAKKVYFLQNS--TGSGLAPFDC--WLLLRGI- 239 (378)
T ss_pred hhhcCCcEEEEecceeccCCccceeEEEEeCcH-------------HHHHHHHHHHHh--cCCcCCHHHH--HHHHccC-
Confidence 222 78999999999998865 588888663 443433322111 1111111111 1122222
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc-CC-EEecCCCC-------------cceeeeeccCCCCc-HHHHHHhhcccCeEE
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER-GY-DLVSGGTE-------------NHLVLVNLRNKGID-GSRVEKVLESVHIAA 414 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~-------------~~~~~v~~~~~~~~-~~~~~~~L~~~gI~v 414 (519)
..+....++..+|+..+.+.|++. .+ .+..++-. .+-.++.+...+.. ..++.+.|+..+|.+
T Consensus 240 -~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~ 318 (378)
T TIGR01329 240 -KTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITV 318 (378)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCccccc
Confidence 346778889999999999999887 32 33332211 11223333333333 456777887778877
Q ss_pred ccccc------CCCC-----CC-------CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 415 NKNTV------PGDV-----SA-------MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 415 ~~~~~------p~~~-----~~-------~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+-..+ |... .+ ..++-||+|.+ -||.+.+.+-|.+++..
T Consensus 319 s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 319 SFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG--------IEDVDDLISDLDIAFVT 375 (378)
T ss_pred CCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHHh
Confidence 64321 2211 00 12467899876 37888888888887763
No 210
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=2.3e-18 Score=174.27 Aligned_cols=298 Identities=15% Similarity=0.147 Sum_probs=188.0
Q ss_pred cCeeecCCCCCCcHH--HHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENFTSVS--VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~~~~~--V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.++|..+||+.++. ...+ ..+ + .||.. . ..|+ +.+++++|+... .+|++++|++
T Consensus 25 ~~i~ls~Nenp~~~~~~~~~~--~~~-~----~Yp~~-------~-~~L~----~~ia~~~~~~~~---~~I~i~~Gs~e 82 (339)
T PRK06959 25 AWLDLSTGINPHGYPVPPVPA--DAW-R----RLPED-------D-DGLA----ACAARYYGAPDA---AHVLPVAGSQA 82 (339)
T ss_pred hhceeccCCCCCCCCCCCCCH--HHH-H----hCCCc-------h-HHHH----HHHHHHhCCCCc---ccEEECcCHHH
Confidence 358999999985322 2211 112 2 13321 1 3444 888999999642 2699999998
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
++. ++..+++||| |++.++++..+.. .+...|..+..++ .+. +.+ .+ ++++++++
T Consensus 83 ~i~-~l~~~~~~g~-v~v~~P~y~~y~~--------~~~~~g~~~~~v~--~~~-------~~~----~~-~~~~v~l~n 138 (339)
T PRK06959 83 AIR-ALPALLPRGR-VGIAPLAYSEYAP--------AFARHGHRVVPLD--EAA-------DTL----PA-ALTHLIVVN 138 (339)
T ss_pred HHH-HHHHhcCCCe-EEEcCCCcHHHHH--------HHHHCCCEEEeec--ccc-------hhc----cc-cCCEEEEeC
Confidence 665 4455688887 7778866655533 2334454444333 321 222 22 45666666
Q ss_pred ccc-ccccccHHHHHHH---HhhcCCEEEehhhhhhhccccCCCCCCCC-CCeEEEEcCCCcc--cCCCcceEEeecccc
Q 010058 233 ASA-YARLYDYARIRKV---CDKQKAVMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSL--RGPRGAMIFFRKGVK 305 (519)
Q Consensus 233 ~sn-~g~~~d~~~i~~i---a~~~~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~S~~K~l--~GprgG~i~~~~~~~ 305 (519)
|+| +|...+.+++.++ |.+++.++|+|+++............ .. .--+++.|++|.+ +|.|.||+++++
T Consensus 139 PnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~-~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--- 214 (339)
T PRK06959 139 PNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAH-TDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--- 214 (339)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhc-cCCCCEEEEecChhhcCCcchheEEEecCH---
Confidence 877 8988887777665 45789999999986532110111100 01 1247788999975 789999999987
Q ss_pred cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhH-HHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Q 010058 306 EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEY-KAYQEQVLSNSSKFARSLLERGYDLVSGGT 384 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 384 (519)
++.+.+.+...+. +.+.....+..++++ ..++ ++.++++.++++.+.+.|++.|+.+..
T Consensus 215 -----------~li~~l~~~~~~~---~vs~~~q~a~~~~L~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--- 274 (339)
T PRK06959 215 -----------ALLAALRDALGAW---TVSGPARHAVRAAFA---DAAWQAAMRERLAADGARLAALLRAHGFAVHA--- 274 (339)
T ss_pred -----------HHHHHHHHhcCCC---CCcHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHCCCCccC---
Confidence 6666665543332 123334444444443 3334 677888999999999999999887652
Q ss_pred CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 385 ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 385 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
...++|+++. +..++.+.|.++||.++.. + ..+++||++. .+ .+|+++++++|++++...
T Consensus 275 ~~~f~~~~~~----~~~~l~~~l~~~GI~vr~~---~-----~~~~lRisi~--~~----~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 275 TPLFSWTDDP----RAAALHAALARRGIWTRYF---A-----PPPSVRFGLP--AD----EAEWQRLEDALAECVPTL 334 (339)
T ss_pred cceEEEEeCC----CHHHHHHHHHhCCeEEEEC---C-----CCCeEEEECC--CC----HHHHHHHHHHHHHHHHHH
Confidence 2345566542 4567888898999999732 1 1358999963 23 689999999999887654
No 211
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=1.9e-18 Score=177.59 Aligned_cols=214 Identities=17% Similarity=0.181 Sum_probs=150.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
.....+| +.+++++|.+. .+.++||+.|+.+++.++++|||+|+++++.|++........ ....|..
T Consensus 61 p~~~~Le----~~lA~~~g~~~-----~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~----~~~~gi~ 127 (388)
T PRK07811 61 PTRTALE----EQLAALEGGAY-----GRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKV----FTRWGVE 127 (388)
T ss_pred ccHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHh----CcCCCeE
Confidence 4456666 88889999886 388889988999899999999999999998887654322110 1111332
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..+ + ..|++++++++++ +||+|+++ ++| +|...|+++|.++|+++|+++|+|+++..+... .|
T Consensus 128 ~~~~----d----~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~-----~p 193 (388)
T PRK07811 128 YTPV----D----LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQ-----QP 193 (388)
T ss_pred EEEe----C----CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccC-----Cc
Confidence 2222 1 2589999999987 89999998 777 789999999999999999999999998765432 23
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccC-CCCCCccHHHHHHHHHHHHHhc
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFP-GLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~-~~~g~~~~~~iaal~~al~~~~ 350 (519)
+. ++|++++|++|+++||. +|+++++++ ++.+.+...... +. .... ..+ +.++..+.
T Consensus 194 ~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~-------------~l~~~~~~~~~~~g~--~~s~--~~a-~l~~~~L~ 255 (388)
T PRK07811 194 LALGADVVVHSTTKYIGGHSDVVGGALVTNDE-------------ELDEAFAFLQNGAGA--VPGP--FDA-YLTLRGLK 255 (388)
T ss_pred hhhCCcEEEecCceeecCCCCcEEEEEEECCH-------------HHHHHHHHHHHhcCC--CCCH--HHH-HHHHhccC
Confidence 33 78999999999999874 688888763 444433221111 11 1111 111 22333333
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
.+....++..+|+..+.+.|++. ++.
T Consensus 256 --tl~~R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 256 --TLAVRMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 36677788899999999999988 543
No 212
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.82 E-value=6.9e-18 Score=175.14 Aligned_cols=314 Identities=16% Similarity=0.147 Sum_probs=194.3
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcC----
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLK---- 164 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~---- 164 (519)
.|.|.+++.+.+.. + ++.. +.+. .+...+++ +++++++|.+. .+.+.||+.|+.+++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~--~~~~-~~~~-~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAGR-L--TLTS-RAFR-NDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHhh-c--cccc-cccC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 78899999888865 3 2211 1111 23344455 77788888653 38888999999988887742
Q ss_pred -----CC-CEEEEecCCC-cccccccccccCCc-----eeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 165 -----PH-ERIMALDLPH-GGHLSHGYQTDTKK-----ISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 165 -----pG-D~Vl~~~~~~-~~~~~~~~~~~~~~-----v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
+| ++|++++..+ |.... ........ .......+..++ ..|++++++.+.+ ++++|+++
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~le~~i~~-~~~aii~e 194 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTLS-IVGFSTDPDARGGFGPFTPGFRVVP--------FGDAEALEAAITP-NTVAFLVE 194 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccHH-HHhccCCccccccCCCCCCCeEEeC--------CCCHHHHHHHhCC-CeEEEEEc
Confidence 24 6788776543 32211 10000000 000000111111 2478999999986 89999998
Q ss_pred -ccc-cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC--CCCCCC-CCeEEEEcCCCcccC--CCcceEEee
Q 010058 233 -ASA-YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV--IPSPFE-YADVVTTTTHKSLRG--PRGAMIFFR 301 (519)
Q Consensus 233 -~sn-~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~p~~-~~di~~~S~~K~l~G--prgG~i~~~ 301 (519)
+.+ +|...+ +++|+++|++||+++|+|++|. |+...+. .....+ ..|+++++ |+|.| +++|+++++
T Consensus 195 ~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~ 271 (401)
T PRK00854 195 PIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSN 271 (401)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEc
Confidence 444 676665 9999999999999999999986 4433221 000011 35888875 98854 467899998
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
+ ++.+.+.........+ .+....++..++|+.+.. +...++++++.+++.+.|++.+...+.
T Consensus 272 ~--------------~~~~~l~~~~~~~t~~-~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~ 333 (401)
T PRK00854 272 S--------------EVLGVLKPGQHGSTFG-GNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIRSNIVR 333 (401)
T ss_pred H--------------HHHhcccCCCCCCCCC-cCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhccCceE
Confidence 8 4444443221112223 344455555666765432 235678888889999999887543221
Q ss_pred C-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 382 G-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 382 ~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
. .....++.+.+.....+..++.+.|.+.||.+. + ...+.||++++...+ ++|++++++.|++++.
T Consensus 334 ~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~----~-----~~~~~lR~~p~~~~t----~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 334 EVRGRGLMLAVELEPEAGGARQYCEALKERGLLAK----D-----THDHTIRLAPPLVIT----REQVDWALEQIAKVLA 400 (401)
T ss_pred EEeccceEEEEEEecCchhHHHHHHHHHHCCeEEe----c-----CCCCEEEEeCCcccC----HHHHHHHHHHHHHHhh
Confidence 1 112344444443333346678888888899985 1 124689999988778 8999999999998764
No 213
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.82 E-value=5.6e-18 Score=174.26 Aligned_cols=310 Identities=18% Similarity=0.223 Sum_probs=193.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhc--C-CCCEEEEecCCCcccccccccccCCceeee
Q 010058 119 YIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALL--K-PHERIMALDLPHGGHLSHGYQTDTKKISAV 194 (519)
Q Consensus 119 ~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all--~-pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~ 194 (519)
....+.....+++++++|++... ..+.+.+||. ++..++.++- . +||+|+++..+|.+... .+.+.
T Consensus 102 ~~~~l~~~~e~~~~~~~G~~~~~--~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~k--------Ai~~~ 171 (444)
T TIGR03531 102 LLYKLTNKLVKDFLKLLGLRSIK--SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIK--------AISTA 171 (444)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCC--EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHH--------HHHHc
Confidence 34556666669999999997322 1255555553 6665655552 2 69999999876655543 55677
Q ss_pred eeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEc-ccccc--ccccHHHHHHHHhhcCCEEEehhhhhhhcccc
Q 010058 195 SIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAG-ASAYA--RLYDYARIRKVCDKQKAVMLADMAHISGLVAA 269 (519)
Q Consensus 195 g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~-~sn~g--~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~ 269 (519)
|..++.++...+++++.+|+++|++++++. ++.+++++ ++.++ ...|+++|.++|++||+++|+|+||..+....
T Consensus 172 G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~ 251 (444)
T TIGR03531 172 GFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKY 251 (444)
T ss_pred CCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhh
Confidence 877777765456678999999999999862 34555555 43333 68899999999999999999999987644321
Q ss_pred C-CCCCC--CCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHH
Q 010058 270 G-VIPSP--FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVA 345 (519)
Q Consensus 270 ~-~~~~p--~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~a 345 (519)
. ..... ++.+|++++|+||++..|.+ |+++++++ ++.+.+... .++.. .....+. ++++
T Consensus 252 ~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~-------------el~~~i~~~-y~g~~--~~s~~~~-~~~~ 314 (444)
T TIGR03531 252 MELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE-------------NFIQEISKS-YPGRA--SASPSLD-VLIT 314 (444)
T ss_pred hhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH-------------HHHHHHHHh-ccCCC--CChHHHH-HHHH
Confidence 1 11111 22479999999999977654 66767664 555555543 33322 1222232 3344
Q ss_pred HHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----CCEEecCCCCccee-eeeccC-CCCcHHHHHHhhcccCeEEccccc
Q 010058 346 LKQVKTPEYKAYQEQVLSNSSKFARSLLER----GYDLVSGGTENHLV-LVNLRN-KGIDGSRVEKVLESVHIAANKNTV 419 (519)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~-~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~ 419 (519)
+..+...++++++++..++++++.+.|.++ |-.++.. +.|... -+.+.. .+.+...+-..|-..+|.-.....
T Consensus 315 ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~-~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~ 393 (444)
T TIGR03531 315 LLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDT-PENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVT 393 (444)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecC-CCCceeEEEecccccccCHHHHHHHHHhCCCCCceeec
Confidence 455566789999999999999999999775 6666542 123222 222221 133455666677555552111112
Q ss_pred CCCCCCCCCCeEEe---ccC-------ccc---cCCCCHHHHHHHHHHHHHH
Q 010058 420 PGDVSAMVPGGIRM---GTP-------ALT---SRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 420 p~~~~~~~~~~iRi---~~~-------~~t---trg~~~~di~~l~~~l~~~ 458 (519)
|++.... ++..| +.+ ++| ..|++.+|++.+++.|+++
T Consensus 394 ~~~~~~~--~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 394 NGDSKTV--GGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCCceEE--CCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 3432111 11111 111 222 3589999999999999875
No 214
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.82 E-value=5.5e-18 Score=159.88 Aligned_cols=351 Identities=18% Similarity=0.176 Sum_probs=240.8
Q ss_pred ccCeeecCC-CCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHH
Q 010058 76 WKGLELIPS-ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPA 154 (519)
Q Consensus 76 ~~~i~L~a~-en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a 154 (519)
.+.|-|..+ -...|+.+.....+...+.|.++--.++..+...+.+ +-...-.+++.+.|+...+ |.++.++++
T Consensus 30 ~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~-lp~~lgdklApLiGA~~~E----vvv~dtts~ 104 (407)
T COG3844 30 GGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFD-LPERLGDKLAPLIGARAGE----VVVTDTTSI 104 (407)
T ss_pred CCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhh-chhHHHHHhhhhhcCCCCc----eEEeCCcch
Confidence 355666532 3345666666666666666765544443322333333 2234458999999998754 888888885
Q ss_pred HHH-HHHhh--cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 155 NFQ-VYTAL--LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 155 ~~~-~~~al--l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
|+. ++.+. ..+|++|++++- +.+...++....-+.+.+.. |++ .+.++++++++++++ .+.+|.+
T Consensus 105 nl~k~L~aalr~~~~r~vIv~E~---~~fpTdly~a~g~~~~~~~~-----~~~---~~~~~P~~~~~~~~d-d~AvV~L 172 (407)
T COG3844 105 NLFKVLAAALRPQEGRRVIVSEG---DNFPTDLYIAEGLADLLGIG-----YDL---EGVIAPRALEEAITD-DVAVVLL 172 (407)
T ss_pred HHHHHHHHHhccCCCceEEeecC---CCCCcchhhhcchhhhhccc-----ccc---eeeeChHHHHHhhcc-ceEEEEe
Confidence 554 44444 457999998762 22222332222223333322 222 246778899999998 8888888
Q ss_pred cccc--ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc--ceEEeecccc--
Q 010058 232 GASA--YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG--AMIFFRKGVK-- 305 (519)
Q Consensus 232 ~~sn--~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg--G~i~~~~~~~-- 305 (519)
+..| +|...|+.+|.++|+++|++++.|-||++|.++.+++.. ++|+-+.++||.|.|..| +++++.++..
T Consensus 173 ~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~---gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~ 249 (407)
T COG3844 173 SHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAA---GADFAIGCSYKYLNGGPGAPAGLFVAPRHRER 249 (407)
T ss_pred ccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeeccc---CCCeeeeeeceeccCCCCCceeEEeccccccc
Confidence 8777 699999999999999999999999999999999999988 899999999999976555 7888876532
Q ss_pred cc-c---ccCcchhhhHHHHhhh--cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----
Q 010058 306 EI-N---KQGQEVMYAYEDKINQ--AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER---- 375 (519)
Q Consensus 306 ~~-~---~~g~~~~~~~~~~i~~--~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 375 (519)
.. + |-|...-+...+.... ......+|+++...++++..+|+.....++.+.+++-....+++.+.++.+
T Consensus 250 ~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~ 329 (407)
T COG3844 250 SWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYY 329 (407)
T ss_pred cccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccC
Confidence 11 2 3332222333322111 112234589999999999999998887788899999999999999888765
Q ss_pred CCEEecCCC-CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc-CccccCCCCHHHHHHHHH
Q 010058 376 GYDLVSGGT-ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 376 g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~-~~~ttrg~~~~di~~l~~ 453 (519)
++++++|.. ..+-.-+.+..+ .+.++.+.|.++||... -..++.||+++ +.|++ -+|+=..++
T Consensus 330 ~l~l~tPr~~~~rGsqvS~~hp--~~~~V~qaLi~rGVigD---------~R~P~vlRfgftPlY~~----~~DVw~AV~ 394 (407)
T COG3844 330 GLTLVTPRAHEERGSQVSLYHP--HGYQVMQALIDRGVIGD---------FREPDVLRFGFTPLYVS----FVDVWDAVD 394 (407)
T ss_pred CcEEeccchhhhccceeeEecC--cHHHHHHHHHHcCcccc---------ccCCCeeeecCccceec----hhHHHHHHH
Confidence 678887632 112222333322 58889999999999863 23468899996 45666 799999999
Q ss_pred HHHHHHHH
Q 010058 454 FFDAAVKL 461 (519)
Q Consensus 454 ~l~~~l~~ 461 (519)
.|.+++..
T Consensus 395 ~L~evL~t 402 (407)
T COG3844 395 ALEEVLDT 402 (407)
T ss_pred HHHHHHHh
Confidence 99999874
No 215
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.82 E-value=2.4e-18 Score=187.25 Aligned_cols=303 Identities=18% Similarity=0.201 Sum_probs=193.6
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcC-------C-CCEEEEecCCCcccccccccccCCceeeeee
Q 010058 125 SLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLK-------P-HERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~-------p-GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
.+.++++++++|.+. +.+++.+|+.+++++++++-. + .++|+++...|+++... ....|.
T Consensus 546 ~elq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas--------a~~~Gi 613 (954)
T PRK12566 546 DELEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS--------AQMAGM 613 (954)
T ss_pred HHHHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH--------HHHCCC
Confidence 344499999999998 579999999988877777631 2 35778888777666322 223355
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEc-ccccc-ccccHHHHHHHHhhcCCEEEehhhhhhhccccCC-
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAG-ASAYA-RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGV- 271 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~-~sn~g-~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~- 271 (519)
.++.++ .| +++.+|+++|+++++++ ++.+|++. ++++| ...++++|+++|+++|+++++|++|..++.....
T Consensus 614 eVv~Vp--~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~P 690 (954)
T PRK12566 614 RVVIVE--CD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARP 690 (954)
T ss_pred EEEEec--cC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCCh
Confidence 555554 44 46899999999999743 45555555 44455 4456999999999999999999999876654432
Q ss_pred CCCCCCCCeEEEEcCCCcccCCCc-c-----eEEeecccc-ccc-ccCcchhhhHHHHhhhcccCCCCCCcc----HH-H
Q 010058 272 IPSPFEYADVVTTTTHKSLRGPRG-A-----MIFFRKGVK-EIN-KQGQEVMYAYEDKINQAVFPGLQGGPH----NH-T 338 (519)
Q Consensus 272 ~~~p~~~~di~~~S~~K~l~Gprg-G-----~i~~~~~~~-~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~----~~-~ 338 (519)
... ++|++++++||||++|+| | .+.+++.+. ..+ +.| . +... ..+ ..|+.+ .. .
T Consensus 691 g~~---GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~-~---d~~G-----~~~-r~ga~S~~~~gsa~ 757 (954)
T PRK12566 691 ADI---GADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPV-V---PVEG-----PDP-NNGAVSAAPWGSAS 757 (954)
T ss_pred hhc---CCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCC-c---CCCC-----CCC-CCCceeecccchHH
Confidence 122 899999999999988877 3 333333211 111 111 0 0000 000 011111 11 1
Q ss_pred HHHHH-HHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC-C--cceeeeeccC----CCCcHHHHHHhhccc
Q 010058 339 ISGLA-VALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGT-E--NHLVLVNLRN----KGIDGSRVEKVLESV 410 (519)
Q Consensus 339 iaal~-~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~--~~~~~v~~~~----~~~~~~~~~~~L~~~ 410 (519)
++-.+ .-+..+..+ ..+..+....+++++++.|.+ ++.+...+. . .|-+.+++.+ .+.+..++.+.|.++
T Consensus 758 ~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~ 835 (954)
T PRK12566 758 ILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDY 835 (954)
T ss_pred HHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHC
Confidence 11111 112233322 444455557799999999987 454443321 1 1444555542 246677888888899
Q ss_pred CeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhcc
Q 010058 411 HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKG 467 (519)
Q Consensus 411 gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~~ 467 (519)
||..-.-.+| ..+.+|++...+++ ++|++++++++..+.....++.+
T Consensus 836 Gihapt~~fP------v~~~LmIepTE~es----keEIDrf~eAL~~I~~e~~~v~~ 882 (954)
T PRK12566 836 GFHAPTMSFP------VPGTLMVEPTESES----KAELDRFVEAMLSIRAEIGKVQE 882 (954)
T ss_pred CcEEeEEeec------cCCEEEEEeeeeCC----HHHHHHHHHHHHHHHHHHHHHHc
Confidence 9987422222 25789999999999 89999999999999998887753
No 216
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.82 E-value=7.3e-18 Score=174.75 Aligned_cols=317 Identities=16% Similarity=0.209 Sum_probs=193.0
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHH
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG--NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYT 160 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~--~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~ 160 (519)
.+-.++|+.|++++.+.+.+ |. +....+-.+ ....+.+| +.+++++|++. .+.++||++|+..++
T Consensus 88 lg~s~l~~~vieAv~~~~~~-y~--~l~~~l~~g~~g~r~~~le----~~lA~l~gae~-----alvv~sg~aAi~l~l- 154 (454)
T TIGR00474 88 LGRAPLAEEAIEAVTDAARG-YS--NLEYDLETGKRGSRYSHVE----GLLCELTGAED-----ALVVNNNAAAVLLAL- 154 (454)
T ss_pred CCCCCCCHHHHHHHHHHHhc-cc--chhccccccccchHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHH-
Confidence 34456799999999988875 42 111000001 12234444 89999999986 377889988887666
Q ss_pred hhcCCCCEEEEecCCC---cccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cccc
Q 010058 161 ALLKPHERIMALDLPH---GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASAY 236 (519)
Q Consensus 161 all~pGD~Vl~~~~~~---~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn~ 236 (519)
+.+.+||+|++++..| |+...... .+...|..+..+. . +...|++++++++++ +|++|++. .+|+
T Consensus 155 ~~l~~GdeVIvs~~e~v~~ggs~~i~~-----~~~~~G~~~~~v~--~---~~~~~l~dle~aI~~-~T~lv~~~h~sN~ 223 (454)
T TIGR00474 155 NTLAKGKEVIVSRGELVEIGGSFRIPD-----VMEQSGAKLVEVG--T---TNRTHLKDYEDAITE-NTALLLKVHTSNY 223 (454)
T ss_pred HHhCCcCEEEECCChhhhhcchhhHHH-----HHHHcCCEEEEeC--C---CCCCCHHHHHHhcCc-CCEEEEEEccCcc
Confidence 4579999999988664 33222111 1223354444442 2 234689999999987 89998877 6664
Q ss_pred ---c--ccccHHHHHHHHhhcCCEEEehhhhhhhccc----cCCCC-----CCCC-CCeEEEEcCCCcccCCCcceEEee
Q 010058 237 ---A--RLYDYARIRKVCDKQKAVMLADMAHISGLVA----AGVIP-----SPFE-YADVVTTTTHKSLRGPRGAMIFFR 301 (519)
Q Consensus 237 ---g--~~~d~~~i~~ia~~~~~~livD~ah~~g~~~----~~~~~-----~p~~-~~di~~~S~~K~l~GprgG~i~~~ 301 (519)
| ...|+++|.++|+++|+++++|.+ +|.+. .++.. .+.. ++|++++|+||+|+||.+|+++++
T Consensus 224 ~~~G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~ 301 (454)
T TIGR00474 224 RIVGFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGK 301 (454)
T ss_pred cccCCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEEC
Confidence 4 478999999999999999999964 44331 11111 1222 799999999999999999999998
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh--H---------HHHHHHHHHHHHHHHH
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE--Y---------KAYQEQVLSNSSKFAR 370 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~--~---------~~~~~~~~~~~~~l~~ 370 (519)
+ ++.+++....+.- .-...-..++++..++.....+. + ....++..+++..+.+
T Consensus 302 ~--------------~~i~~l~~~~l~r-~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~ 366 (454)
T TIGR00474 302 K--------------ELIERLKKNPLTR-ALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAK 366 (454)
T ss_pred H--------------HHHHhhhhchhHH-HHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHH
Confidence 8 3333322110000 00011223445555555433321 1 1123467778999999
Q ss_pred HHHhc---CC--EEec------CCC--Cc--ceeeeeccCCCCcHHHHHHhhcccC--eEEcccccCCCCCCCCCCeEEe
Q 010058 371 SLLER---GY--DLVS------GGT--EN--HLVLVNLRNKGIDGSRVEKVLESVH--IAANKNTVPGDVSAMVPGGIRM 433 (519)
Q Consensus 371 ~L~~~---g~--~~~~------~~~--~~--~~~~v~~~~~~~~~~~~~~~L~~~g--I~v~~~~~p~~~~~~~~~~iRi 433 (519)
.|++. |+ .++. +|+ .. ....+.+.+.+.+..++++.|++.. |..+. ..+.+-+
T Consensus 367 ~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~----------~~~~~~l 436 (454)
T TIGR00474 367 RLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGRI----------EDDRFLL 436 (454)
T ss_pred HHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEE
Confidence 99773 22 3332 121 11 1233445555677889999998755 54431 1233433
Q ss_pred ccCccccCCCCHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l 455 (519)
- -|-+.++|++.+++.|
T Consensus 437 d-----~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 437 D-----LRTLLEDEEELLIEAL 453 (454)
T ss_pred E-----eCcCCHHHHHHHHHHh
Confidence 3 3445579999998876
No 217
>PRK07505 hypothetical protein; Provisional
Probab=99.82 E-value=1.9e-17 Score=171.78 Aligned_cols=331 Identities=12% Similarity=0.107 Sum_probs=193.2
Q ss_pred cCeeecCCCCCC----cHHHHHHHhhHhhhccCC-CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSENFT----SVSVMQAVGSVMTNKYSE-GYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en~~----~~~V~ea~~~~l~~~~~~-g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++... +++ .|.|++|+.+.+.. +.. ++.+.+.....+.. ..+++.+++++|. . .+.++||
T Consensus 47 ~~ld~~s~-~~lgl~~~p~v~~A~~~~l~~-~g~~~~~~~~~~~~~~~~----~~l~~~la~~~~~-~-----~~~~~sG 114 (402)
T PRK07505 47 TFVNFVSC-SYLGLDTHPAIIEGAVDALKR-TGSLHLSSSRTRVRSQIL----KDLEEALSELFGA-S-----VLTFTSC 114 (402)
T ss_pred eEEEeecC-CccCCCCCHHHHHHHHHHHHH-hCCCCCCccchhhhhHHH----HHHHHHHHHHhCC-C-----EEEECCh
Confidence 34676553 333 89999999998864 410 11111111112233 3444888899987 2 3888999
Q ss_pred HHHHHHHHHhh----cCCCCE-EEEec-CCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhC
Q 010058 152 SPANFQVYTAL----LKPHER-IMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFR 225 (519)
Q Consensus 152 s~a~~~~~~al----l~pGD~-Vl~~~-~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k 225 (519)
+.|+..++..+ ..+|+. |++.+ ..|++... .. .....+..+..++ . .|++++++++.+ +
T Consensus 115 ~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~-~~-----~~~~~~~~v~~~~--~------~d~~~l~~~~~~-~ 179 (402)
T PRK07505 115 SAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNI-LK-----GICADETEVETID--H------NDLDALEDICKT-N 179 (402)
T ss_pred HHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHh-hh-----hhhhcCCeEEEeC--C------CCHHHHHHHHhc-C
Confidence 99888666443 222332 44443 33443211 00 1111122222222 1 388999998876 6
Q ss_pred CcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhcc-ccCC--C--CCC--CCCCeEEEEcCCCcccCCCcc
Q 010058 226 PKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLV-AAGV--I--PSP--FEYADVVTTTTHKSLRGPRGA 296 (519)
Q Consensus 226 ~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~-~~~~--~--~~p--~~~~di~~~S~~K~l~GprgG 296 (519)
+++++++ +.| +|...++++|+++|+++|++||+|++|..+.. ..+. . ..+ .+...+++.|++|.++++ ||
T Consensus 180 ~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg 258 (402)
T PRK07505 180 KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GG 258 (402)
T ss_pred CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-Ce
Confidence 6777776 555 78899999999999999999999999854321 1110 0 011 123467788999998755 78
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCC-CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQ-GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~-g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
++++.+. ++.+.+.....+... ++++....++..++++......+.+..+++.++.+.+.+.+...
T Consensus 259 ~~~~~~~-------------~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 325 (402)
T PRK07505 259 VIMLGDA-------------EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE 325 (402)
T ss_pred EEEeCCH-------------HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc
Confidence 8775432 455555443333322 44556667666667765444445555556655555443332111
Q ss_pred CCEEecCCCCcceeeeecc-CCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 376 GYDLVSGGTENHLVLVNLR-NKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
. ..+.+.+..+. ....+..++.+.|.+.||.++....|.. +...+.|||+++...+ ++|++++++.
T Consensus 326 ----~---~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~lRi~~~~~~t----~eei~~~~~~ 392 (402)
T PRK07505 326 ----Q---SGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVV--AKGRAGLRIMFRASHT----NDEIKRLCSL 392 (402)
T ss_pred ----C---CCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCC--CCCCceEEEecCccCC----HHHHHHHHHH
Confidence 0 11222222111 1111356678888889999974322211 1233689999998888 8999999999
Q ss_pred HHHHHHH
Q 010058 455 FDAAVKL 461 (519)
Q Consensus 455 l~~~l~~ 461 (519)
|++++..
T Consensus 393 l~~~l~~ 399 (402)
T PRK07505 393 LKEILDE 399 (402)
T ss_pred HHHHHHh
Confidence 9998864
No 218
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.81 E-value=2.4e-18 Score=177.03 Aligned_cols=241 Identities=20% Similarity=0.219 Sum_probs=156.4
Q ss_pred CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCC
Q 010058 87 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPH 166 (519)
Q Consensus 87 ~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pG 166 (519)
+..+.+.+++....... .+|+..|+ +++..+++| +++++++|.+. .+.++||+.|+..++.++++||
T Consensus 34 ~~~~~~~~~~~~~~~~~--~~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~v~~ssG~~Ai~~al~al~~~G 100 (390)
T PRK08133 34 FVFESAAEAAARFAGEE--PGNIYSRF--TNPTVTMFQ----ERLAALEGAEA-----CVATASGMAAILAVVMALLQAG 100 (390)
T ss_pred cccCCHHHHHHhhcCCc--CCceeECC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCC
Confidence 34455555554432221 13443333 234455565 88889999875 3677777778888899999999
Q ss_pred CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHH
Q 010058 167 ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYAR 244 (519)
Q Consensus 167 D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~ 244 (519)
|+|++.+..|++....... .+...|..+..++ . .|.+++++++++ +||+|+++ ++| +|...|+++
T Consensus 101 d~Vi~~~~~y~~t~~~~~~----~~~~~G~~v~~vd--~------~d~~~l~~~i~~-~tklV~ie~p~NptG~v~dl~~ 167 (390)
T PRK08133 101 DHVVSSRSLFGSTVSLFEK----IFARFGIETTFVD--L------TDLDAWRAAVRP-NTKLFFLETPSNPLTELADIAA 167 (390)
T ss_pred CEEEEccCcchhHHHHHHH----HHHHcCcEEEEEC--C------CCHHHHHHhcCc-CCeEEEEECCCCCCCCcCCHHH
Confidence 9999998888776532210 1112344444432 2 278999999887 89999987 777 899999999
Q ss_pred HHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHH
Q 010058 245 IRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYED 320 (519)
Q Consensus 245 i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~ 320 (519)
|.++|+++|+++++|+++..+.... |+. ++|++++|+||+++|+. ||++++++ ++.+
T Consensus 168 I~~la~~~gi~livD~t~~~~~~~~-----pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~--------------~~~~ 228 (390)
T PRK08133 168 LAEIAHAAGALLVVDNCFCTPALQQ-----PLKLGADVVIHSATKYLDGQGRVLGGAVVGSK--------------ELME 228 (390)
T ss_pred HHHHHHHcCCEEEEECCCcccccCC-----chhhCCcEEEeecceeecCCcceEeEEEEcCH--------------HHHH
Confidence 9999999999999999976554322 232 68999999999987642 47888776 3323
Q ss_pred HhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 321 KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 321 ~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
++...... .| .......+ ..+++.+. .+....++..+|+..+.+.|++. ++.
T Consensus 229 ~~~~~~~~--~g-~~~~~~~a-~~~l~gl~--tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 229 EVFGFLRT--AG-PTLSPFNA-WVFLKGLE--TLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHH--hC-CCCCHHHH-HHHHcccc--hHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 22211111 01 11111121 12233222 46777788889999999999988 554
No 219
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.81 E-value=3.9e-18 Score=176.11 Aligned_cols=213 Identities=16% Similarity=0.192 Sum_probs=147.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+....+| +.+++++|+++ .|.++||+.|+..++.++++|||+|++..+.|++....... .+...|..
T Consensus 65 p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~----~~~~~G~~ 131 (403)
T PRK07503 65 PTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHH----GLGEFGVT 131 (403)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHH----HHhhCCEE
Confidence 4466666 88889999875 48889999888888888999999999988777554321110 11223444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ . .|++++++++++ +||+|+++ ++| +|...|+++|.++|+++|+++|+|+++..+... .|
T Consensus 132 v~~vd--~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~-----~~ 197 (403)
T PRK07503 132 VRHVD--L------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ-----RP 197 (403)
T ss_pred EEEeC--C------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-----Cc
Confidence 44432 1 278999999987 89999988 777 889999999999999999999999998765332 22
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|++++|++|+++|+. +|+++.++ ++.+++.........|.......+ +.++..+.
T Consensus 198 l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~--------------~l~~~l~~~~~~~~~g~~~s~~~a--~l~l~~L~- 260 (403)
T PRK07503 198 LELGADLVVHSATKYLGGHGDITAGLVVGGK--------------ALADRIRLEGLKDMTGAVMSPFDA--FLLMRGLK- 260 (403)
T ss_pred hhhCCCEEEccccccccCCCceeEEEEEcCH--------------HHHHHHHhhhHHhCcCCCCCHHHH--HHHHcCcc-
Confidence 22 78999999999998753 68888665 455544321111111221111112 22333332
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
.+....++..+++..+.+.|++.
T Consensus 261 -tl~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 261 -TLALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhC
Confidence 46667788889999999999987
No 220
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=3.8e-18 Score=175.04 Aligned_cols=213 Identities=17% Similarity=0.134 Sum_probs=147.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
++...++| +.+++++|.+. .+.++||+.|+..++.++++|||+|+++++.|++....... ....|.
T Consensus 52 np~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~-----~~~~g~ 117 (385)
T PRK08574 52 NPTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKS-----LEKFGV 117 (385)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH-----hhccCc
Confidence 35567777 88889999864 37788888899889999999999999999888776532211 111232
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
.+..+ .+|++++++++++.++|+|+++ ++| +|...|+++|.++|+++|+++++|++|..|....++ ..
T Consensus 118 ~v~~~---------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~ 187 (385)
T PRK08574 118 KVVLA---------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL-RH 187 (385)
T ss_pred EEEEE---------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hh
Confidence 22221 2468999999876589999988 666 789999999999999999999999998877553322 11
Q ss_pred CCCCCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 275 PFEYADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 275 p~~~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
++|++++|+||+++|+. ||+++++++ ++.+++...... .|.......+ +.++..+.
T Consensus 188 ---GaDivv~S~sK~l~g~~d~~gG~vi~~~~-------------~~~~~~~~~~~~--~g~~~~p~~a--~l~l~~l~- 246 (385)
T PRK08574 188 ---GADFVVHSLTKYIAGHNDVVGGVAVAWSG-------------EFLEELWEWRRR--LGTIMQPFEA--YLVLRGLK- 246 (385)
T ss_pred ---CCcEEEeeCceeecCCCCceeEEEEECcH-------------HHHHHHHHHHHh--cCCCCCHHHH--HHHHcccC-
Confidence 68999999999998874 586666543 444433221110 1211111112 22333333
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
.+....++..+|+..+.+.|++.
T Consensus 247 -tL~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 247 -TLEVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHcC
Confidence 36677888899999999999887
No 221
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=3.9e-18 Score=175.50 Aligned_cols=287 Identities=15% Similarity=0.155 Sum_probs=183.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
...+.+| +++++++|++. .+.++||+.|+.+++. +++|||+|+++++.|++.+..+.. .....|..
T Consensus 54 p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~----~~~~~G~~ 119 (390)
T PRK08064 54 PTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITE----VLSRFGIE 119 (390)
T ss_pred hhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHH----HHHHcCCE
Confidence 4456666 88999999875 4889999988776665 789999999999888766543221 11123544
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++. .|++++++++++ ++++|+++ ++| +|...|+++|.++|+++|+++++|+++..+.... |
T Consensus 120 v~~v~~--------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-----~ 185 (390)
T PRK08064 120 HTFVDM--------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK-----P 185 (390)
T ss_pred EEEECC--------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC-----c
Confidence 444432 278999999887 89999998 777 8999999999999999999999999977654321 2
Q ss_pred CC-CCeEEEEcCCCcccCCCc---ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPRG---AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gprg---G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|+++.|+||++.|+.+ |+++++++ ++.+++.....+. |....+.-+.+ ++.-+.
T Consensus 186 ~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~-------------~~~~~l~~~~~~~--g~~~~~~~a~l--~~~gl~- 247 (390)
T PRK08064 186 LDLGADVVLHSATKFLAGHSDVLAGLAVVKDE-------------ELAQKLYFLQNSF--GAVLGVQDCWL--VLRGLK- 247 (390)
T ss_pred hhhCCcEEEeecceeccCCccceeEEEEeCCH-------------HHHHHHHHHHHhc--CCCCCHHHHHH--HHcccC-
Confidence 22 689999999999988764 88887653 4555544332221 22111111221 222222
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhcC-C-EEecCCCC-------------cceeeeeccCCCCcHHHHHHhhcccCe---E
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLERG-Y-DLVSGGTE-------------NHLVLVNLRNKGIDGSRVEKVLESVHI---A 413 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~L~~~gI---~ 413 (519)
.+....++..+++..+.+.|++++ + .+..++-. .+-.++.+...+ ...+.++++..++ .
T Consensus 248 -tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~--~~~~~~f~~~l~l~~~~ 324 (390)
T PRK08064 248 -TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--EEAVRQFVSHVKLPVFA 324 (390)
T ss_pred -cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC--HHHHHHHHHhCCcceEc
Confidence 356777888999999999999873 2 33333211 112233333222 3456667776666 3
Q ss_pred Ecccc------cCCC--C---C-----C--CCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 414 ANKNT------VPGD--V---S-----A--MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 414 v~~~~------~p~~--~---~-----~--~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
++-+. .|.. + . . ..++-||+|++..++ ++.++.+.++|++
T Consensus 325 ~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~----~dli~dl~~Al~~ 382 (390)
T PRK08064 325 VSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENV----DDLIADFEQALSY 382 (390)
T ss_pred ccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCH----HHHHHHHHHHHHh
Confidence 33220 1110 0 0 0 125679999987666 6666666666654
No 222
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.81 E-value=2.8e-18 Score=175.74 Aligned_cols=215 Identities=20% Similarity=0.183 Sum_probs=149.9
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
+++...++| +++++++|.+. .+.++||+.|+..++.++++|||+|++....|++....... .....|
T Consensus 38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~g 104 (369)
T cd00614 38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFER----LLPKLG 104 (369)
T ss_pred CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHH----HHhhcC
Confidence 345667777 88888999764 48888998899999999999999999998777665422110 011234
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+..++ . -|++++++++++ ++++|++. ++| +|...|+++|.++|+++|+++++|++|..+...
T Consensus 105 ~~~~~v~--~------~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~----- 170 (369)
T cd00614 105 IEVTFVD--P------DDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ----- 170 (369)
T ss_pred eEEEEeC--C------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-----
Confidence 3333332 2 158999999987 89999988 666 789999999999999999999999998776541
Q ss_pred CCCC-CCeEEEEcCCCcccCC---CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh
Q 010058 274 SPFE-YADVVTTTTHKSLRGP---RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV 349 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~l~Gp---rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~ 349 (519)
.|+. ++|+++.|++|+++|+ ++|+++++++ ++.+++...... ..++.+.. .+ +.++..+
T Consensus 171 ~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-------------~l~~~l~~~~~~-~g~~~~p~--~a-~~~l~~l 233 (369)
T cd00614 171 RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE-------------ALIQRLRFLRLA-LGTILSPF--DA-WLLLRGL 233 (369)
T ss_pred ChhhhCCcEEEeccceeccCCCCceEEEEEeCcH-------------HHHHHHHHHHHh-hCCCCCHH--HH-HHHHcCC
Confidence 2333 6899999999999875 4799999763 333333322111 11122211 11 2233333
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 350 KTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
. .+....++..+|++.+.+.|++.+
T Consensus 234 ~--tl~~r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 234 K--TLPLRMERHSENALKVAEFLEKHP 258 (369)
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3 356678889999999999999884
No 223
>PRK08354 putative aminotransferase; Provisional
Probab=99.81 E-value=2e-17 Score=165.55 Aligned_cols=291 Identities=14% Similarity=0.110 Sum_probs=173.8
Q ss_pred cCeeecCCCCCC-cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 77 KGLELIPSENFT-SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 77 ~~i~L~a~en~~-~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
+.|+|..++|+. |+.+.+++.+.+.. . .+||. ...++ +++++++|. +|++|+|++ +
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~-~-~~yp~---------~~~l~----~~ia~~~~~-------~I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI-S-GRYTY---------YEWLE----EEFSKLFGE-------PIVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH-h-hcCCC---------hHHHH----HHHHHHHCC-------CEEECCCHHHH
Confidence 468898888865 67888888776543 2 13432 12344 777788872 499999998 7
Q ss_pred HHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-c
Q 010058 155 NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-A 233 (519)
Q Consensus 155 ~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~ 233 (519)
+..++ .++.|||+|++.+++++++.. .+...|..+.. ..+|++.+++.++ ++++++++ |
T Consensus 67 l~~~~-~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~---------~~~d~~~l~~~~~--~~~~vi~~~P 126 (311)
T PRK08354 67 LYLIG-ILALRDRKVIIPRHTYGEYER--------VARFFAARIIK---------GPNDPEKLEELVE--RNSVVFFCNP 126 (311)
T ss_pred HHHHH-HhhCCCCeEEEeCCCcHHHHH--------HHHHcCCEEee---------cCCCHHHHHHhhc--CCCEEEEecC
Confidence 66455 455599999999977776644 22233433322 2357899988776 45666666 7
Q ss_pred cc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcc--cCCCcceEEeecccccc
Q 010058 234 SA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL--RGPRGAMIFFRKGVKEI 307 (519)
Q Consensus 234 sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l--~GprgG~i~~~~~~~~~ 307 (519)
+| +|...+. ++|.++|+++|+++|+|+++. ++...+.... ..-.+++.|++|++ +|.|.||+++..
T Consensus 127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~-~f~~~~~~~~--~~~vi~~~S~SK~~~l~GlRiG~~v~~~----- 198 (311)
T PRK08354 127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAFI-DFVKKPESPE--GENIIKLRTFTKSYGLPGIRVGYVKGFE----- 198 (311)
T ss_pred CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcch-hccccccccC--CCcEEEEeccHhhcCCccceeeeeeehH-----
Confidence 77 8877764 566677889999999999963 3332221111 13457888999975 789999999832
Q ss_pred cccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCc
Q 010058 308 NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTEN 386 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 386 (519)
+..+++ ..+. +.+....+++...++ .+++ +++++++.+.+....+ +..... ++.
T Consensus 199 ---------~~l~~~---~~~~---~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~~~~~l~~~l~~~--~~~ 253 (311)
T PRK08354 199 ---------EAFRSV---RMPW---SIGSTGYAFLEFLIE----DDFE----HLRKTMPLIWREKERFEKALYVK--SDA 253 (311)
T ss_pred ---------HHHHHc---CCCc---cCCHHHHHHHHHHHH----hHHH----HHHHHHHHHHHHHHHHHHhcCCC--CCC
Confidence 222222 1111 112222322222222 1222 2222233333222222 111112 223
Q ss_pred ceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 387 HLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 387 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
.++++++. +..++.+.|.+.||.+. ||.... .++++||++.. .++.+++.++|+++
T Consensus 254 ~~~~~~~~----~~~~~~~~l~~~gv~v~----~g~~f~-~~~~iRi~~~~-------~~~~~~l~~al~~~ 309 (311)
T PRK08354 254 NFFIKDVG----DAEKFVEFLKRNGILVR----DCTSFG-LPGYIRFSVRD-------REENEKLIRALREW 309 (311)
T ss_pred cEEEEECC----CHHHHHHHHHHCCeEEE----ecccCC-CCCeEEEEeCC-------HHHHHHHHHHHHHh
Confidence 45555542 45678888888999997 554311 25799999763 57788888888764
No 224
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=8.8e-18 Score=171.78 Aligned_cols=211 Identities=18% Similarity=0.161 Sum_probs=147.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
...+.+| +.++++.|.+ ++++++|++ |+..++.++++|||+|+++++.|++......... ...|.
T Consensus 53 pt~~~Le----~~lA~leg~e------~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~----~~~gi 118 (388)
T PRK08861 53 PNRGLLE----QTLSELESGK------GAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRA----NKGDF 118 (388)
T ss_pred chHHHHH----HHHHHHhCCC------eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHH----hcCCe
Confidence 4466677 8888999964 366677666 8888999999999999999888876543221100 01122
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
+...+ + ..|++++++++++ +|++|+++ ++| +|...|+++|.++|+++|+++++|+++..+... .
T Consensus 119 --~v~~v--d----~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~-----~ 184 (388)
T PRK08861 119 --KVQFV--D----QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQ-----K 184 (388)
T ss_pred --EEEEE--C----CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccC-----C
Confidence 22222 2 2589999999887 89999998 777 889999999999999999999999998776543 2
Q ss_pred CCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 275 PFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
|+. ++|++++|+||+++|+. ||+++++++ ++.+++..... ..|....+ ..+ ...++-+.
T Consensus 185 pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~-------------~~~~~~~~~~~--~~G~~~~p-~~a-~l~~rgl~ 247 (388)
T PRK08861 185 PLELGADFVIHSTTKYINGHSDVIGGVLITKTK-------------EHAEELAWWGN--CIGATGTP-FDS-YMTLRGIR 247 (388)
T ss_pred CcccCCCEEEeecceeccCCCcceeEEEEecHH-------------HHHHHHHHHHh--ccCCCCCh-HHH-HHHHhcCC
Confidence 333 79999999999999875 588888653 44444332111 11221111 111 22333333
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
.+....++..+++..+++.|++.
T Consensus 248 --Tl~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 248 --TLGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhC
Confidence 36777899999999999999988
No 225
>PRK08637 hypothetical protein; Provisional
Probab=99.80 E-value=2e-17 Score=170.85 Aligned_cols=308 Identities=16% Similarity=0.155 Sum_probs=180.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCce
Q 010058 114 YGGNEYIDMAESLCQKRALDAFQ-LDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191 (519)
Q Consensus 114 y~~~~~~~~le~~~~~~~~~~~g-~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v 191 (519)
|+...+...+++...+++.+..+ .+++.+ .+|++|+|++ ++..++.++++|||+|++.++.++.+.....
T Consensus 40 Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~------- 111 (388)
T PRK08637 40 YAPPQGIPELRDLWQEKMLRENPSLSGKKM-SLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFN------- 111 (388)
T ss_pred CCCCCCCHHHHHHHHHHHhccCcccccccc-ceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH-------
Confidence 34445567777666666655432 333211 2689999998 8887888999999999999977766643111
Q ss_pred eeeeeeeEEEeeeeCCCCCCCCHHHHHHHhh---hhCCcEEEEc-ccc-ccccccH---HHHHHHHhh-----cCCEEEe
Q 010058 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAA---LFRPKLIVAG-ASA-YARLYDY---ARIRKVCDK-----QKAVMLA 258 (519)
Q Consensus 192 ~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~---~~k~klIi~~-~sn-~g~~~d~---~~i~~ia~~-----~~~~liv 258 (519)
...|..+..++ ++.+++.+|++++++.++ +.+.++++++ |+| +|..++. ++|.++|++ +++++|+
T Consensus 112 ~~~g~~vv~v~--~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~ 189 (388)
T PRK08637 112 TRRGAEIVTYP--IFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVV 189 (388)
T ss_pred HhcCCEEEEec--ccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEe
Confidence 12354444454 322345689999998876 2234456566 777 8877764 555666654 8999999
Q ss_pred hhhhhhhccccC-CCCC---CC-C---CC-eEEEEcCCCc--ccCCCcceEEeecccccccccCcchhhhHHHHhhhcc-
Q 010058 259 DMAHISGLVAAG-VIPS---PF-E---YA-DVVTTTTHKS--LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAV- 326 (519)
Q Consensus 259 D~ah~~g~~~~~-~~~~---p~-~---~~-di~~~S~~K~--l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~- 326 (519)
|+++. .+...+ ..+. .+ + .. -+.+.|++|. ++|.|.||+++.... |+. .++.+.+....
T Consensus 190 De~Y~-~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~------~~~--~~l~~~~~~~~~ 260 (388)
T PRK08637 190 DDAYF-GLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKA------GSS--QTVKEALEKKVK 260 (388)
T ss_pred cccch-hcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEcccc------CCc--HHHHHHHHHHHH
Confidence 99854 332222 1111 00 1 11 1233488885 578999999865300 000 03333332210
Q ss_pred --cCCCCCCccHHHHHHHHHHHHHhcCHhH----HHHHHHHHHHHHHHHHHHHhc----CCEEecCCCCcceeeeeccCC
Q 010058 327 --FPGLQGGPHNHTISGLAVALKQVKTPEY----KAYQEQVLSNSSKFARSLLER----GYDLVSGGTENHLVLVNLRNK 396 (519)
Q Consensus 327 --~~~~~g~~~~~~iaal~~al~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~ 396 (519)
.....++.+.....++..++. ...+ ++....++++++.+.+.|++. ++.+..+ ..+.++|+.+.
T Consensus 261 ~~~~~~~~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~l~-- 334 (388)
T PRK08637 261 GLIRSNISNGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPF-NSGYFMCLKLK-- 334 (388)
T ss_pred HHhhcccCCCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc-cceEEEEecCC--
Confidence 001112333344444444443 3334 333445666777777888765 3554443 23456666664
Q ss_pred CCcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 397 GIDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 397 ~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+.+..++.+.| +++||.+. +. ..+++||++.... +++++..++.|.++++
T Consensus 335 ~~~~~~l~~~l~~~~gv~~~----~~-----~~~~iRi~~~~~~-----~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 335 GVDAEELRVHLLEKYGIGTI----AL-----NETDLRIAFSCVE-----EEDIPELFDSIYKAIK 385 (388)
T ss_pred hHHHHHHHHHHhhhcceEEE----ec-----cCCceEEEeecCC-----HHHHHHHHHHHHHHHH
Confidence 34566777766 57899875 21 2467999987633 5899999988888875
No 226
>PLN02590 probable tyrosine decarboxylase
Probab=99.80 E-value=2.6e-17 Score=173.29 Aligned_cols=318 Identities=15% Similarity=0.106 Sum_probs=197.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCC----cceEEeCCcHHHHHHHHHhhcC-----------CCCEEEEecCCCccccc
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKW----GVNVQSLSGSPANFQVYTALLK-----------PHERIMALDLPHGGHLS 181 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~----~~~V~~~sGs~a~~~~~~all~-----------pGD~Vl~~~~~~~~~~~ 181 (519)
.....++|+.+.+|+++++|.+...| +..++.++||.||+.++.+.-. |.=.|++.+..|.+...
T Consensus 165 sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~K 244 (539)
T PLN02590 165 SPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRK 244 (539)
T ss_pred CchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHH
Confidence 35677899999999999999975321 1234444444488766555311 11133344444433322
Q ss_pred ccccccCCceeeeeee---eEEEeeeeCC-CCCCCCHHHHHHHhhhh-----CCcEEEEc--cccccccccHHHHHHHHh
Q 010058 182 HGYQTDTKKISAVSIF---FETMPYRLDE-STGYIDYEQLEKSAALF-----RPKLIVAG--ASAYARLYDYARIRKVCD 250 (519)
Q Consensus 182 ~~~~~~~~~v~~~g~~---~~~v~~~~d~-~~~~iD~d~l~~~i~~~-----k~klIi~~--~sn~g~~~d~~~i~~ia~ 250 (519)
.+.+.|.. ++.|| +|. +++.+|+++|++++.+. .|-+|+.+ .+++|...|+++|.++|+
T Consensus 245 --------Aa~ilGlg~~~vr~Vp--~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~ 314 (539)
T PLN02590 245 --------ACLIGGIHEENIRLLK--TDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAK 314 (539)
T ss_pred --------HHHHcCCCcccEEEEe--CCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHH
Confidence 44455553 45555 443 35799999999999652 35566665 445899999999999999
Q ss_pred hcCCEEEehhhhhhhccccCCC---CCCCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHH------
Q 010058 251 KQKAVMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYED------ 320 (519)
Q Consensus 251 ~~~~~livD~ah~~g~~~~~~~---~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~------ 320 (519)
+||+|++||+|+.......... ...++.+|.++...||||..|.+ |++++++...+........ ++..
T Consensus 315 ~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~--~YL~~~~~~~ 392 (539)
T PLN02590 315 KYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNP--EYLEFKVSKK 392 (539)
T ss_pred HhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCH--HHhCCccccc
Confidence 9999999999865443322111 12345799999999999998888 8999987421110000000 0110
Q ss_pred --HhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeecc--C
Q 010058 321 --KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLR--N 395 (519)
Q Consensus 321 --~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~--~ 395 (519)
..+.. ....+.+.. .....+..+++.+...+|.+++++..+++++|.+.|++. +|+++.+.. +.+|.++ +
T Consensus 393 ~~~~d~~-d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~---l~iVcFr~~~ 467 (539)
T PLN02590 393 DTVVNYK-DWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY---FSLVCFRLAP 467 (539)
T ss_pred ccCCCcc-ccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc---eEEEEEEecC
Confidence 00000 001122222 334566778888888899999999999999999999887 799987633 4444443 3
Q ss_pred CCCcH-------HHHHHhhcccCe-EEcccccCCCCCCCCCCeEEeccCc-cccCCCCHHHHHHHHHHHHHHHHH
Q 010058 396 KGIDG-------SRVEKVLESVHI-AANKNTVPGDVSAMVPGGIRMGTPA-LTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 396 ~~~~~-------~~~~~~L~~~gI-~v~~~~~p~~~~~~~~~~iRi~~~~-~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+.+. .++.+.|.+.|. .+....+. +...||+++.. .|+ ++|++.+.+.|.+....
T Consensus 468 ~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~------g~~~lR~~i~n~~T~----~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 468 VDGDEDQCNERNRELLAAVNSTGKIFISHTALS------GKFVLRFAVGAPLTE----EKHVTEAWQIIQKHASK 532 (539)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEEC------CEEEEEEEecCCCCC----HHHHHHHHHHHHHHHHH
Confidence 22221 234445544444 44322121 23479998744 444 99999999999887653
No 227
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=7e-18 Score=172.30 Aligned_cols=289 Identities=14% Similarity=0.083 Sum_probs=179.4
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
+++..+.+| +.++++.|.+. .+.+.||+.|+..++.++++|||+|++++..+++....... .....|
T Consensus 48 gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~----~~~~~g 114 (377)
T TIGR01324 48 GTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDI----VLKRMG 114 (377)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHH----HHHhcC
Confidence 445667788 88888999764 36667777799989999999999999988776553221100 011123
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+..+ +.. +.+++++++++ +||+|+++ ++| +|...|+++|+++|+++|+++++|++|..|....
T Consensus 115 i~v~~~----d~~----~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~---- 181 (377)
T TIGR01324 115 VDITYY----DPL----IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK---- 181 (377)
T ss_pred cEEEEE----CCC----CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC----
Confidence 333322 211 23788888887 89999998 776 7899999999999999999999999998876643
Q ss_pred CCCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCC-ccHHHHHHHHHHHHH
Q 010058 274 SPFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGG-PHNHTISGLAVALKQ 348 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~-~~~~~iaal~~al~~ 348 (519)
|+. ++|+++.|.+|+++|+. ||++++++ +..+++..... ..|. ....... ..++-
T Consensus 182 -pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~--------------~~~~~l~~~~~--~~G~~l~p~~a~---~~~rg 241 (377)
T TIGR01324 182 -PLEHGVDISIQAGTKYLVGHSDIMIGTVVANA--------------RTWDQLREHSY--LMGQMVDADDAY---TTLRG 241 (377)
T ss_pred -ccccCceEEEecCceeccCCCCceEEEEEeCH--------------HHHHHHHHHHH--HhCCCCCHHHHH---HHHhh
Confidence 222 79999999999998875 38888776 33333321111 1122 1221111 22222
Q ss_pred hcCHhHHHHHHHHHHHHHHHHHHHHhc-CC-EEecCCC---------------CcceeeeeccCCC-CcHHHHHHhhccc
Q 010058 349 VKTPEYKAYQEQVLSNSSKFARSLLER-GY-DLVSGGT---------------ENHLVLVNLRNKG-IDGSRVEKVLESV 410 (519)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~---------------~~~~~~v~~~~~~-~~~~~~~~~L~~~ 410 (519)
+. ......++..+|+..+++.|+++ .+ ++..++- .++++.+.+...+ .....+.+.|+..
T Consensus 242 l~--tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~ 319 (377)
T TIGR01324 242 LR--TLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLF 319 (377)
T ss_pred hh--hHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcc
Confidence 22 24556888899999999999987 33 3443321 1334444443111 1133455566556
Q ss_pred CeEEccccc------CC-CCC-------CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 411 HIAANKNTV------PG-DVS-------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 411 gI~v~~~~~------p~-~~~-------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++.++-..+ |. ... ...++-||+|.+. ||.+.+++-|.+++.
T Consensus 320 ~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl--------E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 320 GLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL--------ENVDDLKADLKAGFE 375 (377)
T ss_pred eEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC--------CCHHHHHHHHHHHHh
Confidence 666653210 11 000 0123468888763 677777777777664
No 228
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.80 E-value=4.6e-17 Score=171.67 Aligned_cols=316 Identities=15% Similarity=0.129 Sum_probs=191.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCC----CCc-----ceEEeCCcHH-HHHHHHHhh----cC-------------------
Q 010058 118 EYIDMAESLCQKRALDAFQLDPA----KWG-----VNVQSLSGSP-ANFQVYTAL----LK------------------- 164 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~----~~~-----~~V~~~sGs~-a~~~~~~al----l~------------------- 164 (519)
....++|+.+.+|++++++..++ .|. ..-.++||++ ||+.++.+. +.
T Consensus 125 pa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~ 204 (522)
T TIGR03799 125 KAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKH 204 (522)
T ss_pred cchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhh
Confidence 45678999999999999853111 010 1134466665 888765542 21
Q ss_pred ---CCCEEEEecCCCcccccccccccCCceeeeee---eeEEEeeeeCCCCCCCCHHHHHHHhhh---hCCcEEEEc---
Q 010058 165 ---PHERIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLDESTGYIDYEQLEKSAAL---FRPKLIVAG--- 232 (519)
Q Consensus 165 ---pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~v~~~~d~~~~~iD~d~l~~~i~~---~k~klIi~~--- 232 (519)
++..|++++..|.+... .+.+.|. .++.+| +| +++.+|+++|++++.+ .+++.++++
T Consensus 205 ~~~~~~~v~~S~~~H~S~~k--------aa~~lglg~~~v~~vp--~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvata 273 (522)
T TIGR03799 205 YGYDGLAILVSERGHYSLGK--------AADVLGIGRDNLIAIK--TD-ANNRIDVDALRDKCAELAEQNIKPLAIVGVA 273 (522)
T ss_pred ccCCceEEEECCCchHHHHH--------HHHHcCCCcccEEEEE--eC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 23467777766766543 2233343 344444 45 4689999999998863 244444333
Q ss_pred -cccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC---CCCCCCCeEEEEcCCCcccCCCc-ceEEeecccccc
Q 010058 233 -ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI---PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 307 (519)
Q Consensus 233 -~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~---~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~ 307 (519)
.+.+|...|+++|+++|+++|+++++|+|+..+....... -..++.+|.++++.|||+.+|.| |+++++++....
T Consensus 274 Gtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~ 353 (522)
T TIGR03799 274 GTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMS 353 (522)
T ss_pred cCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHH
Confidence 2238999999999999999999999999987655433211 11233689999999999999999 999998742110
Q ss_pred cccCcchhhhHHHHhh--hcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCC
Q 010058 308 NKQGQEVMYAYEDKIN--QAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGT 384 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~--~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 384 (519)
...-. . .+...-. ........++.+... ..+..+++.+...+++++.++..+++++|.+.|++. +++++.++.
T Consensus 354 ~~~~~-~--~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~ 429 (522)
T TIGR03799 354 AIEHH-A--EYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPE 429 (522)
T ss_pred HhccC-c--chhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCC
Confidence 00000 0 0000000 000011234545444 357889999988999999999999999999999988 899987642
Q ss_pred CcceeeeeccCCCCc--------------H-------HHHHHhhcccCeEE-cccccCCCC-CCCCCCeEEeccC-cccc
Q 010058 385 ENHLVLVNLRNKGID--------------G-------SRVEKVLESVHIAA-NKNTVPGDV-SAMVPGGIRMGTP-ALTS 440 (519)
Q Consensus 385 ~~~~~~v~~~~~~~~--------------~-------~~~~~~L~~~gI~v-~~~~~p~~~-~~~~~~~iRi~~~-~~tt 440 (519)
.+++.+.+.+.++. . ..+.+.+.+.|... +...+.... .....-.+|+++. ..|+
T Consensus 430 -l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt 508 (522)
T TIGR03799 430 -LCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTT 508 (522)
T ss_pred -ccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCC
Confidence 23333333333210 0 13444555555543 322222111 1112246999874 4455
Q ss_pred CCCCHHHHHHHHH
Q 010058 441 RGFVEEDFEKVAE 453 (519)
Q Consensus 441 rg~~~~di~~l~~ 453 (519)
++|++.+++
T Consensus 509 ----~~~i~~~l~ 517 (522)
T TIGR03799 509 ----HEILQDILD 517 (522)
T ss_pred ----HHHHHHHHH
Confidence 888887664
No 229
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=9.5e-18 Score=172.96 Aligned_cols=211 Identities=20% Similarity=0.182 Sum_probs=146.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+..+.++ ++++++.|.+. +|.++||+.|+..++.++++|||+|+++++.|++........ ....|..
T Consensus 60 p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~----~~~~g~~ 126 (405)
T PRK08776 60 PTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNAL----AKKGHFA 126 (405)
T ss_pred hHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHH----HHhcCcE
Confidence 3345555 88888999754 589999988888899999999999999887776643211110 0111322
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..+ + ..|++++++++++ +||+|+++ ++| +|...|+++|.++|+++|+++++|++|..+.. ..|
T Consensus 127 v~~v----~----~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~-----~~p 192 (405)
T PRK08776 127 LITA----D----LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-----QKP 192 (405)
T ss_pred EEEE----C----CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-----CCc
Confidence 2222 2 2488999999876 89999988 777 88999999999999999999999999876532 123
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcc-cCCCCCCccHHHHHHHHHHHHHhc
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAV-FPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
+. ++|++++|.||++.|+. +|+++++++ ++.+++.... ..+. .++..... ..+..+
T Consensus 193 l~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~-------------~l~~~l~~~~~~~g~--~~s~~~a~---l~~~gl- 253 (405)
T PRK08776 193 LEFGADLVLHSTTKYINGHSDVVGGAVVARDA-------------ELHQQLVWWANALGL--TGSPFDAF---LTLRGL- 253 (405)
T ss_pred ccccCCEEEecCceeecCCCCceEEEEEeCCH-------------HHHHHHHHHHHhcCC--CCCHHHHH---HHHhhh-
Confidence 33 78999999999998875 588877653 4444443211 1111 12222211 222222
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
..++...++..+|+..+.+.|++.
T Consensus 254 -~tl~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 254 -RTLDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHcC
Confidence 246788899999999999999987
No 230
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=6.2e-18 Score=157.47 Aligned_cols=313 Identities=19% Similarity=0.231 Sum_probs=212.2
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc-CCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL-KPH 166 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all-~pG 166 (519)
+..+.+++|.++... ..-|+......+|| ++.+++||-+. .++++||+..|+.+++.-+ +||
T Consensus 34 PTdeMr~am~eA~vg--------DdVyGeD~tt~rLE----~~vA~l~GKEA-----gLFv~SGTmgNllaIm~Hc~~rg 96 (384)
T KOG1368|consen 34 PTDEMRRAMAEASVG--------DDVYGEDPTTNRLE----QRVAELFGKEA-----GLFVPSGTMGNLLAIMVHCHQRG 96 (384)
T ss_pred ChHHHHHHHhhcccC--------cccccCCccHHHHH----HHHHHHhCccc-----eeeecccccccHHHHHHHhcCCC
Confidence 456777777665433 23456556678888 88889999885 5999999999998888875 599
Q ss_pred CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhC-------CcEEEEc-ccc-cc
Q 010058 167 ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFR-------PKLIVAG-ASA-YA 237 (519)
Q Consensus 167 D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k-------~klIi~~-~sn-~g 237 (519)
.+|++-+..| ...+.+.. ...+.|..+..+. +.+++.+|+++|++++...+ |++|.+. ..| .|
T Consensus 97 ~eii~gd~~H---I~~~E~gg--~s~l~gv~~~tv~---~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~G 168 (384)
T KOG1368|consen 97 SEIIVGDRAH---IHRYEQGG--ISQLAGVHVRTVK---NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCG 168 (384)
T ss_pred ceEEeccchh---eeehhccC--hhhhccceeEeee---eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccC
Confidence 9999877443 22111110 1234455554442 33578999999999997433 6888887 333 45
Q ss_pred -ccccHH---HHHHHHhhcCCEEEehhhhhhhc-cccCCCCCC-CCCCeEEEEcCCCcccCCCcceEEeecccccccccC
Q 010058 238 -RLYDYA---RIRKVCDKQKAVMLADMAHISGL-VAAGVIPSP-FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQG 311 (519)
Q Consensus 238 -~~~d~~---~i~~ia~~~~~~livD~ah~~g~-~~~~~~~~p-~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g 311 (519)
...|++ ++.++|++||+.|+.|+|..... ++.++.-.. ...+|-+....+|+|+.|-|.+|++++
T Consensus 169 g~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k--------- 239 (384)
T KOG1368|consen 169 GKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSK--------- 239 (384)
T ss_pred ceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccH---------
Confidence 677755 66788999999999999865432 222331110 116788988999999999999999998
Q ss_pred cchhhhHHHH---hhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCcc
Q 010058 312 QEVMYAYEDK---INQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG-YDLVSGGTENH 387 (519)
Q Consensus 312 ~~~~~~~~~~---i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~ 387 (519)
+++++ ++++. .|+.-...+.+. +|+-.+ +..+. ..++..+.++.|++.+...+ +++-.+..+..
T Consensus 240 -----~FI~kA~~~RKal----GGGmRQsGvLaa-aaLval-~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etN 307 (384)
T KOG1368|consen 240 -----DFIDKARHFRKAL----GGGMRQSGVLAA-AALVAL-DENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETN 307 (384)
T ss_pred -----HHHHHHHHHHHHh----cCchhHHHHHHH-HHHHHh-hcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcc
Confidence 44443 22221 123222222221 122222 22344 56677888999999998874 77766645666
Q ss_pred eeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 388 LVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 388 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
++.+.+....++.+++.+.|++.||.+- +++ ...+|+.++...+ .++++.+...+.+.+
T Consensus 308 iv~~~l~q~~~~~~~l~~~~~k~gi~lm----~~~-----s~r~Rivlh~Qvt----~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 308 IVNMVLCQARLTAEELCKFLEKNGILLM----GGA-----SRRIRIVLHHQVT----DEDVEYVKSVLSKKF 366 (384)
T ss_pred eeeeecccccCCHHHHHHHHHHCCeEEe----ecc-----ccceEEEEEEecC----HHHHHHHHHHHHHHH
Confidence 7777666678899999999999999984 443 3459999998888 899999999995433
No 231
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.80 E-value=7.5e-18 Score=173.73 Aligned_cols=216 Identities=18% Similarity=0.163 Sum_probs=150.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
....++| +.+++++|.+. .+.+.||+.|+..++.++++|||+|++.+..|++.+..... .+...|..
T Consensus 70 p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~----~~~~~G~~ 136 (403)
T PRK07810 70 PTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNE----ILPRWGVE 136 (403)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHH----HHHHcCcE
Confidence 4466777 88899999874 49999999998889999999999999988666554332110 11223444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ ..|++++++++++ ++++|+++ ++| +|...|+++|.++|+++|+++++|+++..+....++ ..
T Consensus 137 v~~vd--------~~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~-~~- 205 (403)
T PRK07810 137 TVFVD--------GEDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGL-PL- 205 (403)
T ss_pred EEEEC--------CCCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hc-
Confidence 44432 1389999999987 89999988 777 889999999999999999999999998766543222 11
Q ss_pred CCCCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH
Q 010058 276 FEYADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP 352 (519)
Q Consensus 276 ~~~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~ 352 (519)
++|++++|.+|+++|.. ||+++++++ .+.+++..... . .|.......++ .++..+.
T Consensus 206 --gaDivv~S~tK~l~g~g~~~gG~v~~~~~-------------~~~~~l~~~~~-~-~g~~~s~~~a~--l~l~~L~-- 264 (403)
T PRK07810 206 --GADVVVYSGTKHIDGQGRVLGGAILGDRE-------------YIDGPVQKLMR-H-TGPALSAFNAW--VLLKGLE-- 264 (403)
T ss_pred --CCcEEEccCCceecCCcCceeEEEEeChH-------------HHHHHHHHHHH-H-hCCCCCHHHHH--HHHhccC--
Confidence 78999999999997644 588888873 22222221110 1 12111111222 2333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 353 EYKAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
.+....++..+++..+.+.|++. ++.
T Consensus 265 tl~~R~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 265 TLALRVRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 36778899999999999999987 443
No 232
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.80 E-value=7e-18 Score=173.21 Aligned_cols=211 Identities=17% Similarity=0.187 Sum_probs=145.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+....+| +.+++++|++. .+.+.||+.|+.+++.++++|||+|++.+..|++....... .....|..
T Consensus 54 p~~~~le----~~la~l~g~~~-----~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~----~~~~~g~~ 120 (380)
T TIGR01325 54 PTVAAFE----ERIAALEGAER-----AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISE----ILPRFGIE 120 (380)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHH----HHHHhCCE
Confidence 4456666 88889999864 37788888899989999999999999988777664322110 11122433
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ . .|++++++++++ ++++|+++ ++| +|...|+++|.++|+++|+++++|+++..+... .|
T Consensus 121 v~~v~--~------~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~-----~p 186 (380)
T TIGR01325 121 VSFVD--P------TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQ-----QP 186 (380)
T ss_pred EEEEC--C------CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-----Cc
Confidence 33332 1 278999998876 89999998 666 789999999999999999999999998654332 23
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|++++|+||+++|+. ||++++++ ++.+.+...... .|.... ...+ +.++..+.
T Consensus 187 l~~g~Divv~S~sK~l~g~g~~~gG~vv~~~--------------~~~~~l~~~~~~--~g~~~~-p~~a-~~~l~~l~- 247 (380)
T TIGR01325 187 LKLGADVVVYSATKHIDGQGRVMGGVIAGSE--------------ELMAEVAVYLRH--TGPAMS-PFNA-WVLLKGLE- 247 (380)
T ss_pred hhhCCCEEEeeccceecCCCCeEEEEEEeCH--------------HHHHHHHHHHHh--hCCCCC-HHHH-HHHHhccC-
Confidence 33 68999999999998753 48888877 444433322111 121111 1111 22333332
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
.+....++..++++.+.+.|++.
T Consensus 248 -tl~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 248 -TLSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHcC
Confidence 35667888999999999999987
No 233
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.80 E-value=7.8e-18 Score=180.27 Aligned_cols=302 Identities=18% Similarity=0.153 Sum_probs=199.0
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 125 SLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
..+++.++++||++. ...+++||+ +|.++++++++|||+|++...+|-+.+. + .+.++|..+..+.-
T Consensus 177 ~eAq~~AA~~fgAd~-----tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~h-g------aLiLsGa~PVYl~P 244 (720)
T PRK13578 177 KDAQKHAAKVFNADK-----TYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHH-G------ALIQAGATPVYLET 244 (720)
T ss_pred HHHHHHHHHHhCCCc-----eEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH-H------HHHHcCCeEEEeec
Confidence 456699999999987 378899998 9999999999999999988866655442 1 13455665555432
Q ss_pred eeCCCC---CCCCH-----HHHHHHhhhh--------C-CcEEEEcccc-ccccccHHHHHHH-HhhcCCEEEehhhhhh
Q 010058 204 RLDEST---GYIDY-----EQLEKSAALF--------R-PKLIVAGASA-YARLYDYARIRKV-CDKQKAVMLADMAHIS 264 (519)
Q Consensus 204 ~~d~~~---~~iD~-----d~l~~~i~~~--------k-~klIi~~~sn-~g~~~d~~~i~~i-a~~~~~~livD~ah~~ 264 (519)
..++ . +.|+. +.|++++.++ + .+++++..++ +|...|++.|.++ ++.++ +|++|+||.+
T Consensus 245 ~~n~-~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 245 ARNP-FGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred cccc-cCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence 2221 2 23454 4488888764 2 3788888555 8999999999998 68888 9999999876
Q ss_pred hccccC----CCCCCCC-CCe----EEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCc
Q 010058 265 GLVAAG----VIPSPFE-YAD----VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGP 334 (519)
Q Consensus 265 g~~~~~----~~~~p~~-~~d----i~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~ 334 (519)
-..... ..++.+. ++| +++-|+||+|++... .+|..++.. +.|.....+ .++++.+..-...++|
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~----i~g~~~~v~-~~r~~~al~m~qSTSP 397 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH----IKGQARYCP-HKRLNNAFMLHASTSP 397 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc----cccccccCC-HHHHHHHHHHHcCCCh
Confidence 443222 2222232 788 999999999998876 688776531 011110001 1344444333334789
Q ss_pred cHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH-Hhc-CCEEecC---------------------------CC-
Q 010058 335 HNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL-LER-GYDLVSG---------------------------GT- 384 (519)
Q Consensus 335 ~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~-g~~~~~~---------------------------~~- 384 (519)
+...++++.+|...+....-++..+...+.+..+++.| +.. ++.++.+ +.
T Consensus 398 sY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~ 477 (720)
T PRK13578 398 FYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEK 477 (720)
T ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCcc
Confidence 99999999998887765344667777888888888887 444 6665521 00
Q ss_pred --------------CcceeeeeccCCCCc------------HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcc
Q 010058 385 --------------ENHLVLVNLRNKGID------------GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPAL 438 (519)
Q Consensus 385 --------------~~~~~~v~~~~~~~~------------~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ 438 (519)
|.-=+++.. .|++ +..+.+.|++.||.+.++. ...|=+ +
T Consensus 478 whgf~~~~~~~~~lDP~KltI~t--~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---------~~~vL~----l 542 (720)
T PRK13578 478 WHGFEGYAEDQYFVDPCKLLLTT--PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---------LNSILF----L 542 (720)
T ss_pred ccccccccccccccCCceEEEEc--CCcCcccccccccCccHHHHHHHHHHcCCEEEecC---------CCeEEE----E
Confidence 000011221 2444 7889999977799997431 122322 3
Q ss_pred ccCCCCHHHHHHHHHHHHHHHH
Q 010058 439 TSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 439 ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.+.|.++++++++++.|.++-+
T Consensus 543 ~s~g~t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 543 LTPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred eCCCCCHHHHHHHHHHHHHHHH
Confidence 3345558999999999987744
No 234
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.79 E-value=2.3e-17 Score=168.60 Aligned_cols=283 Identities=17% Similarity=0.167 Sum_probs=176.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
.....+| +.+++++|++. .+.++||+.|+..+ .++++|||+|++.++.+++....... .....|..
T Consensus 52 pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~-~~ll~~Gd~Vl~~~~~y~~t~~~~~~----~~~~~G~~ 117 (366)
T PRK08247 52 PTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLV-MSLFRSGDELIVSSDLYGGTYRLFEE----HWKKWNVR 117 (366)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHH-HHHhCCCCEEEEecCCcCcHHHHHHH----HhhccCce
Confidence 4466677 88999999976 38888888777755 46889999999999877764332110 11223444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ ..|++++++++++ +|++|+++ ++| ++...|+++|.++|+++|+++|+|+++..+... .|
T Consensus 118 v~~vd--------~~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~-----~p 183 (366)
T PRK08247 118 FVYVN--------TASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ-----RP 183 (366)
T ss_pred EEEEC--------CCCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc-----Cc
Confidence 43332 1389999999987 89999997 666 678899999999999999999999997554332 13
Q ss_pred CC-CCeEEEEcCCCcccCC---CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGP---RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gp---rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|+++.|++|++.|+ ++|+++++++ ++.+++....... ....+... ...++..+.
T Consensus 184 ~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-------------~l~~~~~~~~~~~-g~~~s~~~---a~l~~~~l~- 245 (366)
T PRK08247 184 LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-------------ELCERLAYYQNAA-GAVLSPFD---SWLLIRGMK- 245 (366)
T ss_pred hhcCCcEEEeecceeccCCCceeeeEEecChH-------------HHHHHHHHHHHhc-CCCCChHH---HHHHHhccC-
Confidence 32 6899999999999886 5699888743 3444332211110 01111111 112222222
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc-CCEE-ecCCCCcceeeeeccCCCCcHHHHH---HhhcccCeEEccc------ccC
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER-GYDL-VSGGTENHLVLVNLRNKGIDGSRVE---KVLESVHIAANKN------TVP 420 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~v~~~~~~~~~~~~~---~~L~~~gI~v~~~------~~p 420 (519)
.+....++.++|++.+.+.|++. ++.. ..++. ..++.+.+. + ..... +.|.-..+..+-. ..|
T Consensus 246 -tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~-gg~~sf~~~--~--~~~~~~~~~~l~~~~~~~slg~~~sl~~~p 319 (366)
T PRK08247 246 -TLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGR-GGMLSFRLQ--D--EEWVNPFLKSLKLITFAESLGGVESFITYP 319 (366)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCc-CcEEEEEEC--C--HHHHHHHHHcCCcceEccCCCCCceEEECC
Confidence 35566778899999999999997 6653 33433 234444442 1 22222 3232222222110 124
Q ss_pred CCCC------------CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 421 GDVS------------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 421 ~~~~------------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+... ...++-+|++.+ -||.+.+++-|.+++.
T Consensus 320 ~~~~~~~~~~~~r~~~gi~~~~~R~svG--------lE~~~dl~~dl~~al~ 363 (366)
T PRK08247 320 ATQTHADIPEEIRIANGVCNRLLRFSVG--------IENVEDLIADLKQAFK 363 (366)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 3220 012456888866 3678888888877775
No 235
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=1.6e-17 Score=170.98 Aligned_cols=212 Identities=17% Similarity=0.179 Sum_probs=147.6
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
++....+| +++++++|.+. .|.++||+.|+..++.++++|||+|++.++.|++....... .+...|.
T Consensus 63 ~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~----~~~~~Gi 129 (398)
T PRK08249 63 NPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTE----FLPRMGV 129 (398)
T ss_pred ChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHH----HHhhCCe
Confidence 35566666 88899999865 48999998898889999999999999999888765332211 0112243
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
.+..+ + ..|++++++++++ +|++|+++ ++| +|...|+++|.++|+++|+++++|+++..+... .
T Consensus 130 ~v~~v----d----~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~-----~ 195 (398)
T PRK08249 130 DVTLC----E----TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQ-----N 195 (398)
T ss_pred EEEEc----C----CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccC-----C
Confidence 33222 2 2589999999987 89999987 777 889999999999999999999999998755432 1
Q ss_pred CCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 275 PFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
|+. ++|+++.|++|+++|+. +|++++++ ++.+++...... .|.......++ .++..+.
T Consensus 196 ~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~--------------~l~~~l~~~~~~--~g~~~s~~~a~--l~l~~l~ 257 (398)
T PRK08249 196 PLALGADLVIHSATKFLSGHADALGGVVCGSK--------------ELMEQVYHYREI--NGATMDPMSAY--LILRGMK 257 (398)
T ss_pred chhhCCCEEeccCceecCCCCCceEEEEECCH--------------HHHHHHHHHHHh--cCCCCCHHHHH--HHHhCcc
Confidence 222 78999999999998753 47887765 444443322111 12111111222 1223222
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
.+....++..+|++.+.+.|++.
T Consensus 258 --tL~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 258 --TLKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHcC
Confidence 35667788899999999999987
No 236
>PLN02263 serine decarboxylase
Probab=99.79 E-value=1.7e-16 Score=162.97 Aligned_cols=296 Identities=11% Similarity=0.009 Sum_probs=197.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCC-CCCcceEEeCCcHH-HHHHHHHhhc--CCCCEEEEecCCCcccccccccccCCceeee
Q 010058 119 YIDMAESLCQKRALDAFQLDP-AKWGVNVQSLSGSP-ANFQVYTALL--KPHERIMALDLPHGGHLSHGYQTDTKKISAV 194 (519)
Q Consensus 119 ~~~~le~~~~~~~~~~~g~~~-~~~~~~V~~~sGs~-a~~~~~~all--~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~ 194 (519)
...++|+.+.+|+++++|.++ +.|| + +|||++ +|+.++.+.- .+...+++++..|.+... .+.+.
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G--~-vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~K--------Aa~ll 198 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWG--Y-ITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK--------AARMY 198 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeE--E-EeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHH--------HHHhc
Confidence 467899999999999999976 3453 3 456555 8887666652 244466666655554432 45566
Q ss_pred eeeeEEEeeeeCCCCCCCCHHHHHHHhhhhC--CcEEEEc--cccccccccHHHHHHHHhhcCC-----EEEehhhhhhh
Q 010058 195 SIFFETMPYRLDESTGYIDYEQLEKSAALFR--PKLIVAG--ASAYARLYDYARIRKVCDKQKA-----VMLADMAHISG 265 (519)
Q Consensus 195 g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k--~klIi~~--~sn~g~~~d~~~i~~ia~~~~~-----~livD~ah~~g 265 (519)
|...+.+| .+ +++.+|+++|++++.+.. |-+|+.+ .+++|...|+++|.++|+++|+ |++||+|....
T Consensus 199 gi~~~~Vp--~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~ 275 (470)
T PLN02263 199 RMECVKVD--TL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGL 275 (470)
T ss_pred CCcceEec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhh
Confidence 77666666 34 568999999999997633 5556555 4448999999999999999997 99999995433
Q ss_pred ccccCCCCCCCC---CCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHH
Q 010058 266 LVAAGVIPSPFE---YADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISG 341 (519)
Q Consensus 266 ~~~~~~~~~p~~---~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaa 341 (519)
..+.-....++. .+|.++.++||++..|-+ |++++++... .... ...++.. . ..+...|+.+....+.
T Consensus 276 ~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~-~~~~---~~~~Yl~---~-~d~ti~gSR~g~~al~ 347 (470)
T PLN02263 276 MMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHI-NVLS---SNVEYLA---S-RDATIMGSRNGHAPIF 347 (470)
T ss_pred HhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhhH-hhhc---cChHhhC---C-CCCCcCCCCCcHHHHH
Confidence 332211111222 399999999999999988 9999987421 0000 0001111 1 1233446666555677
Q ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCC
Q 010058 342 LAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPG 421 (519)
Q Consensus 342 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~ 421 (519)
+...++.....++.+..++..++++++.+.|++.|+.++..+. ..++.+..+ + .. ....|..++.
T Consensus 348 lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~---s~~V~f~~p--~-~~----~~~~gW~L~~----- 412 (470)
T PLN02263 348 LWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNEL---SSTVVFERP--K-DE----EFVRRWQLAC----- 412 (470)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCC---ceEEEEecC--c-hH----HhhcceEEcc-----
Confidence 8888998888899999999999999999999999988776422 223333321 1 11 1235666641
Q ss_pred CCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 422 DVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 422 ~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.+..+++.+....+ .+.++++++-|.+...
T Consensus 413 -----~~~~~Hivvmphv~----~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 413 -----QGNIAHVVVMPSVT----IEKLDYFLKELVEKRS 442 (470)
T ss_pred -----CCCcEEEEEcCCCC----HHHHHHHHHHHHHHHh
Confidence 12348887665445 6888888888877665
No 237
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.79 E-value=7.5e-17 Score=166.92 Aligned_cols=310 Identities=15% Similarity=0.156 Sum_probs=187.2
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+|+.+.+.. + ++. .+.+ ..+...+++ ++++++++.+. .+.+.||+.|+.+++....
T Consensus 57 ~~p~v~~ai~~~~~~-~--~~~-~~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~ 122 (396)
T PRK04073 57 RHPKIIQALKDQADK-V--TLT-SRAF-HSDQLGPWY----EKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAY 122 (396)
T ss_pred CCHHHHHHHHHHHhh-c--ccc-cccc-CCHHHHHHH----HHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhh
Confidence 478889988887764 3 111 1111 122223333 77777777543 3778889999988777652
Q ss_pred -----CCC-CEEEEecCC-CcccccccccccCC------ceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 164 -----KPH-ERIMALDLP-HGGHLSHGYQTDTK------KISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 164 -----~pG-D~Vl~~~~~-~~~~~~~~~~~~~~------~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
++| ++|+..+.. ||.+.......... .....+ +..+++ -|++++++.+.+ ++++|+
T Consensus 123 ~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------~d~~~l~~~i~~-~~~~vi 191 (396)
T PRK04073 123 DVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPG--IKKIPY--------GDLEALKAAITP-NTAAFL 191 (396)
T ss_pred hccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCC--ceEeCC--------CCHHHHHHhccc-CeEEEE
Confidence 144 778877643 33332111000000 000000 111111 278999998876 889999
Q ss_pred Eccc-c-cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC-CC-CCCC-CCeEEEEcCCCcccC--CCcceEE
Q 010058 231 AGAS-A-YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRG--PRGAMIF 299 (519)
Q Consensus 231 ~~~s-n-~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~-~p~~-~~di~~~S~~K~l~G--prgG~i~ 299 (519)
+++. | +|...+ +++|+++|++||+++|+|++|. |+...+. .. .... ..|++++| |.+++ +|.|+++
T Consensus 192 iep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~s--K~lg~gg~~ig~~~ 268 (396)
T PRK04073 192 VEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYILG--KALGGGVFPISCVA 268 (396)
T ss_pred EcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEec--ccccCCCCcceEEE
Confidence 9844 4 675554 8999999999999999999976 3322111 00 0001 36888775 87643 6779999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
+++ ++.+.+.........++ +....++..++|+.+.+. .+.++..+++++|.+.|++++...
T Consensus 269 ~~~--------------~i~~~~~~~~~~~t~~~-~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~ 330 (396)
T PRK04073 269 ANR--------------DILGVFTPGSHGSTFGG-NPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPM 330 (396)
T ss_pred EcH--------------HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCc
Confidence 987 55555433222222233 444455555677765432 345677778899999998874332
Q ss_pred ecC-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 380 VSG-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 380 ~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+.. .....++.+.+.. +..++.+.|.+.||.+. |. .++.|||+++...+ ++|++++++.|+++
T Consensus 331 i~~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~~~----~~-----~~~~iRi~p~l~~t----~e~i~~~~~~l~~~ 394 (396)
T PRK04073 331 IKEVRGRGLFIGVELNE---PARPYCEALKEEGLLCK----ET-----HETVIRFAPPLVIT----KEELDWAFEKIKAV 394 (396)
T ss_pred ccceecceEEEEEEecc---hHHHHHHHHHHCCeEEe----cC-----CCCEEEEECCcccC----HHHHHHHHHHHHHH
Confidence 221 1123344555432 45677788888999985 21 23689999988888 89999999999887
Q ss_pred H
Q 010058 459 V 459 (519)
Q Consensus 459 l 459 (519)
+
T Consensus 395 l 395 (396)
T PRK04073 395 L 395 (396)
T ss_pred h
Confidence 5
No 238
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.79 E-value=5.7e-17 Score=168.99 Aligned_cols=337 Identities=15% Similarity=0.137 Sum_probs=198.7
Q ss_pred cCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
+.|++..+.+ ..+|.|.+++.+.+.... .++.. ++.. .+...+.+.+++++|.+.+ .|.+++|
T Consensus 37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~--~~~~----~~~~~l~~~l~~~~~~~~~----~v~~~~s 104 (413)
T cd00610 37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLT--HFSLG--FFYN----EPAVELAELLLALTPEGLD----KVFFVNS 104 (413)
T ss_pred EEEEcCccHHhhccCCCCHHHHHHHHHHHHhCc--CccCc--ccCC----HHHHHHHHHHHHhCCCCCC----EEEEcCc
Confidence 4567765421 257899999998885411 11111 0112 3334455888899986543 3555555
Q ss_pred -HHHHHHHHHhh--cCCCCEEEEecCCCcccccccccccCC-----ceeeeeeeeEEEeeeeCC---CCCCCCHHHHHHH
Q 010058 152 -SPANFQVYTAL--LKPHERIMALDLPHGGHLSHGYQTDTK-----KISAVSIFFETMPYRLDE---STGYIDYEQLEKS 220 (519)
Q Consensus 152 -s~a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~~~~~-----~v~~~g~~~~~v~~~~d~---~~~~iD~d~l~~~ 220 (519)
+.|+.+++..+ ..++|+|++.+..+.+........... ........+..++++... +.+..|++++++.
T Consensus 105 gsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 184 (413)
T cd00610 105 GTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEA 184 (413)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHH
Confidence 55999888876 478999999886654432211111000 000001112233322000 1234589999998
Q ss_pred hhh--hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC--CCCCCC-CCeEEEEcCCCc
Q 010058 221 AAL--FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV--IPSPFE-YADVVTTTTHKS 289 (519)
Q Consensus 221 i~~--~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~p~~-~~di~~~S~~K~ 289 (519)
+++ .++++|++.+.+ .|...+ +++|+++|++||+++|+|++|. |+...+. .....+ ..|++++| |+
T Consensus 185 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~t~s--K~ 261 (413)
T cd00610 185 LEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIVTLG--KG 261 (413)
T ss_pred HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeEEEc--cc
Confidence 876 256777777443 466666 8999999999999999999986 3311111 000011 35777655 98
Q ss_pred ccC-CCcceEEeecccccccccCcchhhhHHHHh--hhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 010058 290 LRG-PRGAMIFFRKGVKEINKQGQEVMYAYEDKI--NQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSS 366 (519)
Q Consensus 290 l~G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i--~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~ 366 (519)
+++ .+.|++++++ ++.+.+ ......+. .+.+...+++..++++.+.. +...+++.++.+
T Consensus 262 l~~g~~~g~~~~~~--------------~~~~~~~~~~~~~~~t-~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~ 323 (413)
T cd00610 262 LGGGLPLGAVLGRE--------------EIMDAFPAGPGLHGGT-FGGNPLACAAALAVLEVLEE---EGLLENAAELGE 323 (413)
T ss_pred ccCccccEEEEEcH--------------HHHHhhccCCCCCCCC-CCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHH
Confidence 854 5568888877 555543 11111122 23344445555667776543 345677888888
Q ss_pred HHHHHHHhcCC--EEecC-CCCcceeeeeccCCC-------CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccC
Q 010058 367 KFARSLLERGY--DLVSG-GTENHLVLVNLRNKG-------IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTP 436 (519)
Q Consensus 367 ~l~~~L~~~g~--~~~~~-~~~~~~~~v~~~~~~-------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~ 436 (519)
++.+.|++... .++.. .....++++.+.... .....+.+.|.+.||.+. |+. ++.+|++++
T Consensus 324 ~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~----~~~-----~~~lR~~~~ 394 (413)
T cd00610 324 YLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLR----PSG-----GNVIRLLPP 394 (413)
T ss_pred HHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEe----ecC-----CCEEEEECC
Confidence 88888877622 22211 112345555553321 245667788888999996 332 467999988
Q ss_pred ccccCCCCHHHHHHHHHHHHHHH
Q 010058 437 ALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 437 ~~ttrg~~~~di~~l~~~l~~~l 459 (519)
...+ ++|++++++.|.+++
T Consensus 395 ~~~t----~~~i~~~~~~l~~~l 413 (413)
T cd00610 395 LIIT----EEEIDEGLDALDEAL 413 (413)
T ss_pred CcCC----HHHHHHHHHHHHHhC
Confidence 8777 899999999998753
No 239
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=2.5e-17 Score=168.93 Aligned_cols=212 Identities=18% Similarity=0.142 Sum_probs=142.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
...+.++ ++++++.|.+. .+.+.+|+.|+..++.++++|||+|+++++.|++......... ...|..
T Consensus 52 pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~----~~~gi~ 118 (386)
T PRK08045 52 PTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLA----KRGCYR 118 (386)
T ss_pred ccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHH----hhCCeE
Confidence 3455666 88889988542 2444555558888888999999999999988876443221110 001111
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+.. ++ ..|++++++++++ +|++|+++ ++| +|...|+++|.++|+++|+++++|+++..+... .|
T Consensus 119 v~~----vd----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-----~p 184 (386)
T PRK08045 119 VLF----VD----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-----NP 184 (386)
T ss_pred EEE----eC----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-----Cc
Confidence 111 22 2589999999887 89999998 777 789999999999999999999999998765432 23
Q ss_pred CC-CCeEEEEcCCCcccCCCc---ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPRG---AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gprg---G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|+++.|+||++.|+.+ |+++++++ ++.+++....... ......... ..++.-+.
T Consensus 185 l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~-------------~~~~~l~~~~~~~-g~~~~p~~~---~l~~rgl~- 246 (386)
T PRK08045 185 LALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-------------DVVTELAWWANNI-GVTGGAFDS---YLLLRGLR- 246 (386)
T ss_pred hhhCCCEEEeecceeccCCCCceeEEEEeCcH-------------HHHHHHHHHHHhc-CCCCCHHHH---HHHHhhhc-
Confidence 33 789999999999998874 88877543 4444332211111 011111111 12222222
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
.+....++..+|+..+++.|++.
T Consensus 247 -tl~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 247 -TLVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHcC
Confidence 26778899999999999999988
No 240
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.79 E-value=2.3e-17 Score=167.12 Aligned_cols=308 Identities=13% Similarity=0.117 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc-CCCCEEEEecCCCcccccccccccCCceeeeee-e
Q 010058 120 IDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL-KPHERIMALDLPHGGHLSHGYQTDTKKISAVSI-F 197 (519)
Q Consensus 120 ~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all-~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~-~ 197 (519)
..++-+.+.+.++++|+.+.+. .+-++.+||+.++.+++..++ ++||+|++.. .++..+ ........|. .
T Consensus 37 F~~i~~e~~~~L~~l~~~~~~~-~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-----~FG~r~--~~eia~~~g~~~ 108 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLGVPADY-LIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-----SFGKGW--VTDVTKQLKLPD 108 (374)
T ss_pred HHHHHHHHHHHHHHHhCCCCCc-EEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-----HHHHHH--HHHHHHhcCCCC
Confidence 3455567789999999984332 132334555559999999999 5899999743 222211 1011222344 2
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc--cccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..+..+ .+..+|+++++. +.. |.++ .+++|...|++++...+ +++++++|+..+.|..+.++.
T Consensus 109 v~~l~~~---~g~~~~~~~ve~-----~~~-v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d--- 174 (374)
T TIGR01365 109 VRVLEAE---YGKLPDLKKVDF-----KND-VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH--- 174 (374)
T ss_pred cEEEcCC---CCCCCCHHHcCC-----CCC-EEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh---
Confidence 4444322 345789999873 122 3343 66689999987655322 489999999877776655443
Q ss_pred CCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-ccCc---c-hhhhHHH--Hhh-hcccCCCCCCccHHHHHHHHHHH
Q 010058 276 FEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQGQ---E-VMYAYED--KIN-QAVFPGLQGGPHNHTISGLAVAL 346 (519)
Q Consensus 276 ~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~~g~---~-~~~~~~~--~i~-~~~~~~~~g~~~~~~iaal~~al 346 (519)
.+|++.+|++|+|.+|.| ++++++++..... ..+. . ..+++.. .+. ...-.....||+.+.+.++..++
T Consensus 175 --~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l 252 (374)
T TIGR01365 175 --KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDAL 252 (374)
T ss_pred --HCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHH
Confidence 589999999999999999 8999888531110 0000 0 0001000 000 00011233577888888888888
Q ss_pred HHhcCH-hHHHHHHHHHHHHHHHHHHHHhcC-CEEecC--CCCcc-eeeeeccCCCC-----c-----HHHHHHhhcccC
Q 010058 347 KQVKTP-EYKAYQEQVLSNSSKFARSLLERG-YDLVSG--GTENH-LVLVNLRNKGI-----D-----GSRVEKVLESVH 411 (519)
Q Consensus 347 ~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~~-~~~v~~~~~~~-----~-----~~~~~~~L~~~g 411 (519)
+.+.++ +++...+++.++++.++++++++| +.++.. ...+. ...+.+...++ + ..++.+.|.+.|
T Consensus 253 ~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (374)
T TIGR01365 253 KWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEG 332 (374)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCC
Confidence 877664 799999999999999999999998 666652 11122 22333323333 2 577889998899
Q ss_pred eEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 412 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 412 I~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
|.+. +|.. ...+..+|||.....+ .+|++.++++|+=+.+
T Consensus 333 i~i~----~G~~-~~~~~~fRIg~~G~i~----~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 333 VAYD----IGSY-RDAPSGLRIWCGATVE----KSDLECLCPWLDWAFA 372 (374)
T ss_pred EEEe----cccc-ccCCCceEEecCCcCC----HHHHHHHHHHHHHHHh
Confidence 9884 3332 2335789999888777 8999999999975543
No 241
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=2.6e-17 Score=169.36 Aligned_cols=290 Identities=15% Similarity=0.059 Sum_probs=182.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc-HHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG-SPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAV 194 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG-s~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~ 194 (519)
+++...++| +.+++++|.+. +++++| +.|+..++.++++|||+|+++++.|++....... .....
T Consensus 63 ~~pt~~~Le----~~lA~l~g~~~------~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~----~~~~~ 128 (394)
T PRK07050 63 ATPTSLALA----QRLAEIEGGRH------ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEW----LARDF 128 (394)
T ss_pred CCHHHHHHH----HHHHHHhCCCe------EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHH----HHHhc
Confidence 335566677 88889999763 555555 4599889999999999999999888765432210 01122
Q ss_pred eeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC
Q 010058 195 SIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI 272 (519)
Q Consensus 195 g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~ 272 (519)
|..+..+ +. .|.+++++++++ +||+|+++ ++| ++...|+++|.++|+++|+++++|++|..|....++.
T Consensus 129 Gi~v~~v----d~----~~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~ 199 (394)
T PRK07050 129 GITVRFY----DP----LIGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFE 199 (394)
T ss_pred CeEEEEE----CC----CCHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHHH
Confidence 4433333 21 145788888886 89999988 666 6789999999999999999999999988776533221
Q ss_pred CCCCCCCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhccc-CCCCCCccHHHHHHHHHHHHH
Q 010058 273 PSPFEYADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVF-PGLQGGPHNHTISGLAVALKQ 348 (519)
Q Consensus 273 ~~p~~~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~-~~~~g~~~~~~iaal~~al~~ 348 (519)
. ++|+++.|.+|++.|.. +|+++++++ ++.+++..... .+ ++... ..+ ..+++-
T Consensus 200 ~----GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-------------~~~~~~~~~~~~~G--~~~~~--~~a-~l~lr~ 257 (394)
T PRK07050 200 H----GVDISVQALTKYQSGGSDVLMGATITADA-------------ELHAKLKLARMRLG--IGVSA--DDC-SLVLRG 257 (394)
T ss_pred c----CCeEEEEECCceecCCCCeeEEEEEECCH-------------HHHHHHHHHHHhcC--CCCCH--HHH-HHHHcC
Confidence 1 68999999999997643 688887653 45554432221 11 11111 111 223333
Q ss_pred hcCHhHHHHHHHHHHHHHHHHHHHHhc-CCE-EecCCC---------------CcceeeeeccCCCC---cHHHHHHhhc
Q 010058 349 VKTPEYKAYQEQVLSNSSKFARSLLER-GYD-LVSGGT---------------ENHLVLVNLRNKGI---DGSRVEKVLE 408 (519)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~---------------~~~~~~v~~~~~~~---~~~~~~~~L~ 408 (519)
+. .+....++..+++..+.+.|+++ ++. +..++- ..+++.+.+.. +. +..++.+.|+
T Consensus 258 l~--tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~-~~~~~~~~~~~~~l~ 334 (394)
T PRK07050 258 LP--SLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDE-RYSPAQVDAFVEALE 334 (394)
T ss_pred CC--cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-CCCHHHHHHHHHcCC
Confidence 32 35667888899999999999987 443 322211 12333333321 21 2344566666
Q ss_pred ccCeEEcccc-----cCCCC-------CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 409 SVHIAANKNT-----VPGDV-------SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 409 ~~gI~v~~~~-----~p~~~-------~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
..++.++-.. .|... .+..++-||||++. ||.+.+++-|.+++..
T Consensus 335 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl--------E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 335 LFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL--------EDEADLIADLEQALEA 391 (394)
T ss_pred CCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc--------CCHHHHHHHHHHHHHH
Confidence 6677665321 12110 01123578998763 6788888888777764
No 242
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=2.3e-17 Score=170.95 Aligned_cols=160 Identities=16% Similarity=0.122 Sum_probs=120.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+..+.+| +.+++++|.+. .|.++||++|+.+++.+++++||+|++++..|++....... .+...|..
T Consensus 69 pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~----~l~~~Gi~ 135 (437)
T PRK05613 69 PTVEALE----NRIASLEGGVH-----AVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLV----TLNRLGIE 135 (437)
T ss_pred hHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHH----HHHhcCeE
Confidence 4556666 88999999864 59999999988888999999999999999888887432211 11122444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ ++ .|++++++++++ +|++|++. ++| ++...|+++|+++|+++|+++++|++|+.|.....+ ..
T Consensus 136 v~~vd---~~----~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~-~~- 205 (437)
T PRK05613 136 VTFVE---NP----DDPESWQAAVQP-NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPL-EL- 205 (437)
T ss_pred EEEEC---CC----CCHHHHHHhCCc-cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccChH-Hh-
Confidence 44432 21 289999999987 89988886 666 688999999999999999999999998776543221 12
Q ss_pred CCCCeEEEEcCCCcccCCC---cceEEeec
Q 010058 276 FEYADVVTTTTHKSLRGPR---GAMIFFRK 302 (519)
Q Consensus 276 ~~~~di~~~S~~K~l~Gpr---gG~i~~~~ 302 (519)
++|++++|+||+++|.. ||+++.+.
T Consensus 206 --GaDivv~S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 206 --GADVVVASLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred --CCCEEEeeccceecCCCcceeEEEEecC
Confidence 79999999999988764 46676543
No 243
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.78 E-value=2e-17 Score=177.04 Aligned_cols=294 Identities=18% Similarity=0.129 Sum_probs=200.5
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 125 SLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
..+++.+++.||++. ...+++||+ +|.+++++++.|||.|++....|-+.+. ++.++|..+..+.-
T Consensus 198 ~eAe~~AA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~h--------aLilsga~PVYl~P 264 (714)
T PRK15400 198 KEAEEYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTH--------LMMMSDVTPIYFRP 264 (714)
T ss_pred HHHHHHHHHHhCCCc-----EEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeEEEecc
Confidence 456699999999997 378899998 9999999999999999988866655443 34556666555532
Q ss_pred eeCCCC---CCCC-----HHHHHHHhhhh----CCcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccC
Q 010058 204 RLDEST---GYID-----YEQLEKSAALF----RPKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAG 270 (519)
Q Consensus 204 ~~d~~~---~~iD-----~d~l~~~i~~~----k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~ 270 (519)
..+ +. +.++ .+.|++++.++ +|+.+++..++ +|...|++.|.++|+.++ +++|+||.+-.....
T Consensus 265 ~rn-~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p 341 (714)
T PRK15400 265 TRN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (714)
T ss_pred ccc-ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCc
Confidence 222 11 2344 89999998763 23356666444 799999999999999887 689999876443322
Q ss_pred CC--CCCCC-CC---e--EEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHH
Q 010058 271 VI--PSPFE-YA---D--VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISG 341 (519)
Q Consensus 271 ~~--~~p~~-~~---d--i~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaa 341 (519)
.. .+++. ++ | +++-|+||+|++... ++|..+..+ + .++++.+..-...++|+...+|+
T Consensus 342 ~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~v------------d-~~~~n~a~~m~~STSPsY~l~AS 408 (714)
T PRK15400 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV------------N-EETFNEAYMMHTTTSPHYGIVAS 408 (714)
T ss_pred ccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCC------------C-HHHHHHHHHHHcCCCcHHHHHHH
Confidence 22 23332 45 5 999999999998876 577665421 1 23444443333347899999999
Q ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C------CEEecCCC----------------------------Cc
Q 010058 342 LAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G------YDLVSGGT----------------------------EN 386 (519)
Q Consensus 342 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~~----------------------------~~ 386 (519)
+.+|..++....-++..+...+.+..+++.|.+. + +.++.+.. |.
T Consensus 409 LD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP 488 (714)
T PRK15400 409 TETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDP 488 (714)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCC
Confidence 9999988765445677788888888888888776 4 55542110 11
Q ss_pred ceeeeeccC---------CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 387 HLVLVNLRN---------KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 387 ~~~~v~~~~---------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
-=+++.... .|+++..+.+.|+++||.+.++ + ...+=+ +.+.|.++++++++++.|.+
T Consensus 489 ~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~---d------~~~iLf----l~s~g~t~~~~~~L~~aL~~ 555 (714)
T PRK15400 489 IKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKT---G------PYNLLF----LFSIGIDKTKALSLLRALTD 555 (714)
T ss_pred ceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEec---C------CCeEEE----EeCCCCCHHHHHHHHHHHHH
Confidence 111222222 3677889999999999999743 1 122323 33345558999999999987
Q ss_pred HHH
Q 010058 458 AVK 460 (519)
Q Consensus 458 ~l~ 460 (519)
+-+
T Consensus 556 f~~ 558 (714)
T PRK15400 556 FKR 558 (714)
T ss_pred HHH
Confidence 644
No 244
>PRK06460 hypothetical protein; Provisional
Probab=99.78 E-value=4.8e-17 Score=166.58 Aligned_cols=211 Identities=17% Similarity=0.151 Sum_probs=142.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
....++| +.+++++|.+. .+.+++|+.|+..++.++++|||+|++++..++..+.... ..+...|..
T Consensus 45 p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~----~~~~~~G~~ 111 (376)
T PRK06460 45 PTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFT----DYLKNWGVN 111 (376)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHH----HHHHhhCcE
Confidence 4455666 88899999875 4888999888888899999999999998755544332211 112233444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ .+ +.+.+++.+.+ ++|+|+++ ++| +|...|+++|.++|+++|+++++|+++..+... .+
T Consensus 112 v~~~~--~~------~~~~l~~~~~~-~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~-----~~ 177 (376)
T PRK06460 112 VDASN--PG------SDNIIEKAKSK-RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ-----KP 177 (376)
T ss_pred EEEEC--CC------CHHHHHHhcCC-CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-----Ch
Confidence 43332 22 22344544444 89999998 677 899999999999999999999999997654211 12
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|+++.|+||+++|++ +|++++++ ++.+.+.....+.. .+... ..+ ..+++. .
T Consensus 178 l~~~~divv~S~sK~l~G~~~~~~G~~~~~~--------------~l~~~l~~~~~~~g-~~~~~--~~a-~~~l~~--~ 237 (376)
T PRK06460 178 LELGADIVVHSASKFLAGHNDVIAGLAAGYG--------------KLLNVIDQMRRTLG-TSLDP--HAA-YLTLRG--I 237 (376)
T ss_pred hhcCCCEEEeecceeccCCCCceEEEEecCH--------------HHHHHHHHHHHhcC-CCCCH--HHH-HHHHhc--h
Confidence 21 58999999999998875 69988877 55554443222211 11121 122 222222 2
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
..++...+++.+|++.+.+.|++.
T Consensus 238 ~~l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 238 KTLKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcC
Confidence 346778889999999999999987
No 245
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.78 E-value=1.3e-16 Score=165.51 Aligned_cols=316 Identities=15% Similarity=0.155 Sum_probs=190.4
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCcHH-HHHHHHHhhcCCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSLSGSP-ANFQVYTALLKPH 166 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~sGs~-a~~~~~~all~pG 166 (519)
+|.+.+++.+.+.. + +.... .|.... ..+ ..++++++++.+ ++ .|.+++|++ |+.+++..+..+|
T Consensus 61 ~p~v~~ai~~~~~~-~--~~~~~-~~~~~~-~~~----la~~l~~~~~~~~~~----~v~~~~sgsea~~~al~~~~~~g 127 (398)
T PRK03244 61 HPAVVEAVTRQLAT-L--GHVSN-LFATEP-QIA----LAERLVELLGAPEGG----RVFFCNSGAEANEAAFKLARLTG 127 (398)
T ss_pred CHHHHHHHHHHHHh-c--cCccC-ccCCHH-HHH----HHHHHHHhCCCCCCC----EEEEeCchHHHHHHHHHHHHHHC
Confidence 68999999888765 2 21111 233212 223 337888888854 22 466665555 9998888776676
Q ss_pred -CEEEEecCCCcccccccccccCCceeeeeeeeEEEeee-eCCCC---CCCCHHHHHHHhhhhCCcEEEEccc-c-cccc
Q 010058 167 -ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LDEST---GYIDYEQLEKSAALFRPKLIVAGAS-A-YARL 239 (519)
Q Consensus 167 -D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~-~d~~~---~~iD~d~l~~~i~~~k~klIi~~~s-n-~g~~ 239 (519)
+.|+..+..|.++.... ..+.|......++. ...+. ...|++++++.+.+ ++++|++.+. | +|..
T Consensus 128 ~~~ii~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~aviiep~~~~~G~~ 199 (398)
T PRK03244 128 RTKIVAAEGGFHGRTMGA-------LALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD-DTAAVFLEPIQGEAGVV 199 (398)
T ss_pred CCeEEEECCCcCCccHHH-------HhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcC-CeEEEEEecccCCCCCc
Confidence 45666654433321100 01111100000000 00000 01378999988865 8899998843 3 6766
Q ss_pred cc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-CCCC-C-CCeEEEEcCCCccc-CCCcceEEeecccccccccC
Q 010058 240 YD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-PSPF-E-YADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQG 311 (519)
Q Consensus 240 ~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~~p~-~-~~di~~~S~~K~l~-GprgG~i~~~~~~~~~~~~g 311 (519)
.+ +++|+++|++||+++|+|++|. |+-..+.. .... . ..|++++| |+|+ |.+.|++++++
T Consensus 200 ~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t~s--K~l~~G~~ig~~~~~~--------- 267 (398)
T PRK03244 200 PPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVTLA--KGLGGGLPIGACLAFG--------- 267 (398)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEEEc--hhhhCCcccEEEEEcH---------
Confidence 65 8899999999999999999985 33222210 0000 1 35787665 9885 55679888887
Q ss_pred cchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC-CCCcceee
Q 010058 312 QEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG-GTENHLVL 390 (519)
Q Consensus 312 ~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~ 390 (519)
++.+.+.........+ .+....++..++++.+.. +.+.+++.++.++|.+.|+++++.++.. .....+.+
T Consensus 268 -----~~~~~~~~~~~~~t~~-~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~ 338 (398)
T PRK03244 268 -----PAADLLTPGLHGSTFG-GNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLG 338 (398)
T ss_pred -----HHHhhccCCCCcCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEE
Confidence 5555443322222223 334445555556665543 2456778888889999999876533221 11234555
Q ss_pred eeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 391 VNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 391 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+.+.. . ....+.+.|.++||.++. . ..+.||++++...+ ++|++++++.|++++..
T Consensus 339 i~~~~-~-~~~~~~~~l~~~Gv~~~~----~-----~~~~iR~~p~~~~t----~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 339 IVLTA-P-VAKAVEAAAREAGFLVNA----V-----APDVIRLAPPLIIT----DAQVDAFVAALPAILDA 394 (398)
T ss_pred EEEec-c-HHHHHHHHHHHCCeEEee----c-----CCCEEEEECCCcCC----HHHHHHHHHHHHHHHHh
Confidence 65532 1 356678888889999962 1 23679999998778 89999999999999864
No 246
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.78 E-value=1.4e-16 Score=164.05 Aligned_cols=325 Identities=14% Similarity=0.165 Sum_probs=194.6
Q ss_pred cCeeecCC--CC---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~--en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+ .+ +.+|.|.+++.+.+.+ + +... +.|. .+...+++ +++++++|.+. -+.+.+|
T Consensus 28 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~-~--~~~~-~~~~-~~~~~~l~----~~la~~~g~~~-----~~~~~sg 93 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGHAHPKLVEALKEQLEK-L--VHVS-NLYY-TEPQEELA----EKLVEHSGADR-----VFFCNSG 93 (379)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhh-c--cccc-cccC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCc
Confidence 34676553 33 3458999999888765 2 1111 2222 23334444 88889999763 2445556
Q ss_pred HHHHHHHHHhh---cC----CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCC-C--CCCHHHHHHHh
Q 010058 152 SPANFQVYTAL---LK----PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDEST-G--YIDYEQLEKSA 221 (519)
Q Consensus 152 s~a~~~~~~al---l~----pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~-~--~iD~d~l~~~i 221 (519)
+.|+..++..+ .. +||+|++++..+.++............. . ....+ +..+. . .-|++++++.+
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~-~---~~~~~--~~~~~~~~~~~d~~~l~~~~ 167 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKY-Q---KGFEP--LVPGFSYAPYNDIESLKKAI 167 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhh-h---ccCCC--CCCCceeeCCCCHHHHHHHh
Confidence 66888777754 22 4899999886654432211111000000 0 00011 11110 1 11899999998
Q ss_pred hhhCCcEEEEcccc--cccc-c---cHHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCcc-c
Q 010058 222 ALFRPKLIVAGASA--YARL-Y---DYARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSL-R 291 (519)
Q Consensus 222 ~~~k~klIi~~~sn--~g~~-~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l-~ 291 (519)
++ ++++|++++.+ .|.. . ++++|.++|+++|+++|+|++|. ++...+.. + .... ..|++++ +|++ +
T Consensus 168 ~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~t~--sK~~~~ 243 (379)
T TIGR00707 168 DD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDIITL--AKGLGG 243 (379)
T ss_pred hh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEEEE--cccccC
Confidence 86 89999998555 2322 2 37899999999999999999985 43222210 0 0011 3467655 5887 4
Q ss_pred CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHH
Q 010058 292 GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371 (519)
Q Consensus 292 GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (519)
|+|.|++++++ ++.+.+........ .+.+...+++..++++.+.. .++.+++.++++.+.+.
T Consensus 244 G~riG~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~ 305 (379)
T TIGR00707 244 GVPIGATLAKE--------------EVAEAFTPGDHGST-FGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKER 305 (379)
T ss_pred CcccEEEEEcH--------------HHHhhhcCCCCCCC-CCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHH
Confidence 56789999987 55555543221112 23455566666677776543 34567778888888888
Q ss_pred HHhcCCEEe-cC-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHH
Q 010058 372 LLERGYDLV-SG-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 372 L~~~g~~~~-~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
|.+.+.... .. .....++++.+.. +..++.+.|.+.||.+. |+ ..+.+|++++...+ +++++
T Consensus 306 l~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~v~----~~-----~~~~lRi~~~~~~t----~~~i~ 369 (379)
T TIGR00707 306 LEELGKNYPNKEVRGKGLMLGIELEA---PCKDIVKKALEKGLLVN----CA-----GPKVLRFLPPLIIT----KEEID 369 (379)
T ss_pred HHHHHhhCCCCccccCceEEEEEecC---cHHHHHHHHHHCCcEEe----eC-----CCCEEEEECCCcCC----HHHHH
Confidence 877533221 11 1123345555432 35678888999999996 32 23689999887777 89999
Q ss_pred HHHHHHHHHH
Q 010058 450 KVAEFFDAAV 459 (519)
Q Consensus 450 ~l~~~l~~~l 459 (519)
++++.|++++
T Consensus 370 ~~~~~l~~~~ 379 (379)
T TIGR00707 370 EAVSALEEAI 379 (379)
T ss_pred HHHHHHHHhC
Confidence 9999998753
No 247
>PLN02509 cystathionine beta-lyase
Probab=99.78 E-value=3.8e-17 Score=169.86 Aligned_cols=219 Identities=19% Similarity=0.187 Sum_probs=146.6
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
++...+.+| +++++++|.+. .+.++||..|+. ++..+++|||+|+++++.|+++...... .+...|
T Consensus 131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~-~il~ll~~GD~VI~~~~~y~~t~~ll~~----~l~~~G 196 (464)
T PLN02509 131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALS-AVTHLIKNGEEIVAGDDVYGGSDRLLSQ----VVPRSG 196 (464)
T ss_pred CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHH-HHHHHhCCCCEEEEcCCchhhHHHHHHH----HHHHCC
Confidence 344555566 88888888664 377788876655 4556899999999999887765321110 011224
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+..+ + ..|++++++++.+ ++|+|+++ ++| +|...|+++|+++|+++|+++++|++|..+....
T Consensus 197 ~~v~~v----d----~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~---- 263 (464)
T PLN02509 197 VVVKRV----N----TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSR---- 263 (464)
T ss_pred eEEEEe----C----CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCC----
Confidence 433333 1 2478999999986 89999988 777 8899999999999999999999999987775422
Q ss_pred CCCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCC-ccHHHHHHHHHHHHH
Q 010058 274 SPFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGG-PHNHTISGLAVALKQ 348 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~-~~~~~iaal~~al~~ 348 (519)
|+. ++|++++|.+|++.|+. +|+++++++ .+.+.+..... ..|+ ..... .+.++..
T Consensus 264 -pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~-------------~l~~~~~~~~~--~~g~~l~p~~---A~l~lr~ 324 (464)
T PLN02509 264 -PLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-------------KLAKEVYFLQN--SEGSGLAPFD---CWLCLRG 324 (464)
T ss_pred -hhhcCCcEEEecCcccccCCCccceeEEEeccH-------------HHHHHHHHHHH--hcCCCcCHHH---HHHHHhh
Confidence 222 79999999999998865 588887663 22222211100 0111 11111 1223333
Q ss_pred hcCHhHHHHHHHHHHHHHHHHHHHHhc-CC-EEecC
Q 010058 349 VKTPEYKAYQEQVLSNSSKFARSLLER-GY-DLVSG 382 (519)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~ 382 (519)
+. .+....++..++++.+.+.|++. .+ ++..|
T Consensus 325 L~--tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yP 358 (464)
T PLN02509 325 IK--TMALRIEKQQENARKIAMYLSSHPRVKKVYYA 358 (464)
T ss_pred hh--hHHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 32 36778899999999999999987 44 34443
No 248
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.78 E-value=1e-16 Score=147.49 Aligned_cols=324 Identities=17% Similarity=0.235 Sum_probs=208.4
Q ss_pred cCeeecC--CCCCCcHHHHHHHhhHhhhccCCCCCCCCCC-------CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEE
Q 010058 77 KGLELIP--SENFTSVSVMQAVGSVMTNKYSEGYPGARYY-------GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQ 147 (519)
Q Consensus 77 ~~i~L~a--~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y-------~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~ 147 (519)
+.||+.| --..++++.++|+.+ |.+||.--.|- -..+.+..+- +.+++++|+|. +.
T Consensus 16 ~~iNv~PiQrGGiLt~eArkal~E-----~gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D~------~R 80 (382)
T COG1103 16 GFINVNPIQRGGILTEEARKALLE-----WGDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMDE------VR 80 (382)
T ss_pred CccccChhhccCcCCHHHHHHHHH-----hcCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCce------ee
Confidence 4566543 334678888888865 33344322111 1111222222 45889999985 88
Q ss_pred eCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--
Q 010058 148 SLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-- 224 (519)
Q Consensus 148 ~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-- 224 (519)
+|.|+- +-++++.+++++||-|++..+.|...+- .....|..+..+|- ..-.++.++++...+.|.+.
T Consensus 81 ~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyv--------AAEragl~v~eVp~-tg~Pey~i~~e~y~~viee~~~ 151 (382)
T COG1103 81 VTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYV--------AAERAGLNVAEVPN-TGYPEYKITPEGYAEVIEEVKD 151 (382)
T ss_pred ecccchhhHHHHHHHhccCCCEEEEcCcchHHHHH--------HHHhcCCeEEecCC-CCCCceEecHHHHHHHHHHHHh
Confidence 999997 9999999999999999977655433322 23345666667762 23345678888777766531
Q ss_pred ----CCcEEEEc--cccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccC-CCcce
Q 010058 225 ----RPKLIVAG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG-PRGAM 297 (519)
Q Consensus 225 ----k~klIi~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~G-prgG~ 297 (519)
.|.+.++. -.+||...|.+.++++|+++|++++..+|+..|-.+...... ++|+++.|.||+|+. .+.|+
T Consensus 152 ~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~---g~DFiVgSGHKsmAAs~PiGv 228 (382)
T COG1103 152 EGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEI---GADFIVGSGHKSMAASAPIGV 228 (382)
T ss_pred ccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccccccccc---CCCEEEecCccchhccCCeeE
Confidence 36677777 444999999999999999999999999999888877655444 899999999999853 33588
Q ss_pred EEeecccccccccCcchhhhHHHHhhhc---ccC-------C--CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHH
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQA---VFP-------G--LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNS 365 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~---~~~-------~--~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~ 365 (519)
+..+.+ +.+.+-+. .++ + ..|.|....+|++-...+.. ..+.+-.+++
T Consensus 229 l~~~eE--------------~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRV------krWdeEv~ka 288 (382)
T COG1103 229 LAMSEE--------------WAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV------KRWDEEVEKA 288 (382)
T ss_pred EeehhH--------------HHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHH------HHHHHHHHHH
Confidence 888774 33222111 011 1 12445544455443332221 2244556788
Q ss_pred HHHHHHHHhc-CCEEecCCCCcceeeeeccCCCC---------cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc
Q 010058 366 SKFARSLLER-GYDLVSGGTENHLVLVNLRNKGI---------DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT 435 (519)
Q Consensus 366 ~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~ 435 (519)
+++.+.|.++ |+..+...+.+|-. +.+..+.+ .+..+.+.|+++||.-- .||. ...+.+|+
T Consensus 289 R~fv~elEkigg~~qlG~rPk~HdL-m~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI---~~G~-----Tk~~K~sv 359 (382)
T COG1103 289 RWFVAELEKIGGVKQLGERPKNHDL-MKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGI---QPGQ-----TKYFKLSV 359 (382)
T ss_pred HHHHHHHHHhhhHHHhCCCCcccce-eeecCchHHHHHHhCcCCceeeHHHHHhcCcccc---ccCc-----eeEEEEEe
Confidence 8999999999 47766654444432 22222111 23346778888887642 1332 34566654
Q ss_pred CccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.|++.|+++.+++++++++..
T Consensus 360 -----yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 360 -----YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred -----ecCCHHHHHHHHHHHHHHHHh
Confidence 577789999999999999863
No 249
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.78 E-value=5.3e-17 Score=165.21 Aligned_cols=217 Identities=15% Similarity=0.154 Sum_probs=146.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+...++| ++++++.|.+. -+.+.||..|+.+++ .+++|||+|+++...+++.......... .+ .
T Consensus 54 p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~-----~~-~ 117 (364)
T PRK07269 54 PTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEK-----EG-R 117 (364)
T ss_pred ccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHh-----cC-c
Confidence 4567777 88888888764 256666666887666 5689999999998766655321110000 00 0
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+ .+ ++..|++++++++++ +||+|+++ ++| +|...|+++|+++|+++|+++++|+++..+.. ..|
T Consensus 118 ---~--~~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~-----~~p 183 (364)
T PRK07269 118 ---F--HF---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY-----QRP 183 (364)
T ss_pred ---E--EE---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CCc
Confidence 0 11 134689999999987 89999888 777 78899999999999999999999999765432 233
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
++ ++|++++|.||+++|+. ||+|+++++ ++.+++..... ..|... ..+. .+.++..+.
T Consensus 184 l~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~-------------~l~~~~~~~~~--~~G~~~-s~~~-a~l~~~~L~- 245 (364)
T PRK07269 184 IELGADIVLHSATKYLSGHNDVLAGVVVTNDL-------------ELYEKLFYNLN--TTGAVL-SPFD-SYLLMRGLK- 245 (364)
T ss_pred hhhCCcEEEecCceeccCCCcccceEEEeCcH-------------HHHHHHHHHHH--HhCCCC-CHHH-HHHHHcCCC-
Confidence 44 79999999999998865 588888764 44444432110 112111 1111 122333333
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc-CC-EEecCC
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER-GY-DLVSGG 383 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~ 383 (519)
.++...++..+|+..+.+.|++. ++ .++.++
T Consensus 246 -tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg 278 (364)
T PRK07269 246 -TLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG 278 (364)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC
Confidence 47888899999999999999987 44 444344
No 250
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.78 E-value=4.1e-17 Score=167.25 Aligned_cols=210 Identities=20% Similarity=0.186 Sum_probs=143.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
.....++ +.++++.|.+ ++++++|++ |+..++.++++|||+|+++++.|++......... ...|.
T Consensus 51 p~~~~le----~~lA~l~g~~------~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~----~~~~~ 116 (382)
T TIGR02080 51 PTRDLLQ----QALAELEGGA------GAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALA----KKGCF 116 (382)
T ss_pred chHHHHH----HHHHHHhCCC------cEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHH----hhcCe
Confidence 4456666 8888888853 366666666 8888999999999999999988876543222110 01112
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
.+.. ++ ..|++++++++++ +||+|+++ ++| +|...|+++|.++|+++|+++++|+++..+....
T Consensus 117 ~v~~----~d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~----- 182 (382)
T TIGR02080 117 RVLF----VD----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQN----- 182 (382)
T ss_pred EEEE----EC----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 2211 12 2379999999987 89999988 777 8899999999999999999999999987664322
Q ss_pred CCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcc-cCCCCCCccHHHHHHHHHHHHHh
Q 010058 275 PFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAV-FPGLQGGPHNHTISGLAVALKQV 349 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-~~~~~g~~~~~~iaal~~al~~~ 349 (519)
|+. ++|+++.|++|++.|+. +|++++++. ++.+++.... ..+...+|. -+ ..+++.+
T Consensus 183 pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~-------------~~~~~l~~~~~~~g~~~sp~---~a--~l~lr~l 244 (382)
T TIGR02080 183 PLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP-------------QVAEELAWWANNLGVTGGAF---DS--YLTLRGL 244 (382)
T ss_pred chhhCCCEEEeecceeccCCCCceeEEEEeCCH-------------HHHHHHHHHHHccCCCCCHH---HH--HHHHccc
Confidence 222 68999999999998764 588887653 4444443221 112111111 11 1223333
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 350 KTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
. .+....++..+|+..+.+.|++.
T Consensus 245 ~--tl~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 245 R--TLVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred c--hHHHHHHHHHHHHHHHHHHHHhC
Confidence 3 35666888899999999999987
No 251
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.78 E-value=5.4e-17 Score=173.68 Aligned_cols=293 Identities=16% Similarity=0.130 Sum_probs=198.0
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 125 SLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
..+++.+++.||++. ...+++||+ +|.++++++++|||+|++...+|-+.+. ++.++|..+..+.-
T Consensus 198 ~eAe~~aA~~fgAd~-----tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~--------aLilsga~PVYl~P 264 (713)
T PRK15399 198 LEAEEYIARTFGAEQ-----SYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAH--------LLMMSDVVPIWLKP 264 (713)
T ss_pred HHHHHHHHHHhCCCc-----EEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHH--------HHHHcCCeeEEecc
Confidence 455689999999987 378899998 9999999999999999988866655443 34556666555432
Q ss_pred eeCCCC---CCCCH-----HHHHHHhhhh----CCcEEEEcccc-ccccccHHHHHHHHhhcCCEE-Eehhhhhhhcccc
Q 010058 204 RLDEST---GYIDY-----EQLEKSAALF----RPKLIVAGASA-YARLYDYARIRKVCDKQKAVM-LADMAHISGLVAA 269 (519)
Q Consensus 204 ~~d~~~---~~iD~-----d~l~~~i~~~----k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~l-ivD~ah~~g~~~~ 269 (519)
..+ +. +.|+. +.|++++.++ +|+.+++..++ +|...|++.|.++| |+.+ ++|+||.+-....
T Consensus 265 ~~n-~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~ 340 (713)
T PRK15399 265 TRN-ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFH 340 (713)
T ss_pred ccc-ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcC
Confidence 222 22 23454 8899988752 34677777445 79999999999998 5655 6999987543222
Q ss_pred CCC--CCCCC---CCeEE---EEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHH
Q 010058 270 GVI--PSPFE---YADVV---TTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTIS 340 (519)
Q Consensus 270 ~~~--~~p~~---~~di~---~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~ia 340 (519)
... .+++. ++|.+ +-|+||+|++... .+|..+..+ + .++++.+..-...++|+...+|
T Consensus 341 p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v------------d-~~~~n~a~~m~~STSPsY~LmA 407 (713)
T PRK15399 341 PIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY------------D-EETFNEAFMMHTSTSPSYPIVA 407 (713)
T ss_pred cccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC------------C-HHHHHHHHHHHcCCCcHHHHHH
Confidence 211 12331 46766 9999999999877 688776531 1 2344444333334789999999
Q ss_pred HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C------CEEecC-------------CC---------------C
Q 010058 341 GLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G------YDLVSG-------------GT---------------E 385 (519)
Q Consensus 341 al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~-------------~~---------------~ 385 (519)
++.+|..++....-++..+...+.+..+++.|.+. + +.++.+ +. |
T Consensus 408 SLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lD 487 (713)
T PRK15399 408 SVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLD 487 (713)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCC
Confidence 99999988865445667778888888888888775 3 344421 00 1
Q ss_pred cceeeeecc---------CCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 386 NHLVLVNLR---------NKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 386 ~~~~~v~~~---------~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
.-=+++... ..|+++..+.+.|+++||.+.++. ...+=+ +.+.|.++++++++++.|.
T Consensus 488 P~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---------~~~vL~----l~s~g~t~~~~~~L~~aL~ 554 (713)
T PRK15399 488 PVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---------PYNLLF----LFSIGIDKTKAMGLLRGLT 554 (713)
T ss_pred CceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCHHHHHHHHHHHH
Confidence 111122222 237889999999999999997431 122322 3334555899999999998
Q ss_pred HHHH
Q 010058 457 AAVK 460 (519)
Q Consensus 457 ~~l~ 460 (519)
+.-+
T Consensus 555 ~f~~ 558 (713)
T PRK15399 555 EFKR 558 (713)
T ss_pred HHHH
Confidence 7744
No 252
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=1.9e-16 Score=163.67 Aligned_cols=313 Identities=12% Similarity=0.098 Sum_probs=182.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh----c
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL----L 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al----l 163 (519)
-.|.|.+|+.+.+.... +.+. .+ ..+...+++ ++++++++.+. .+.+.||+.|+.+++.++ .
T Consensus 48 ~~p~v~~a~~~~~~~~~---~~~~-~~-~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~ 113 (389)
T PRK01278 48 AHPHLVEALKEQAEKLW---HVSN-LY-RIPEQERLA----ERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHY 113 (389)
T ss_pred CCHHHHHHHHHHHHhcC---cccc-cc-CChHHHHHH----HHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHH
Confidence 47888888888876522 1111 11 122333333 66777665432 255566777998887766 5
Q ss_pred CCCC----EEEEecCCCcccccccccccCCceeeeeeeeEEEee-eeCCCCC----CCCHHHHHHHhhhhCCcEEEEccc
Q 010058 164 KPHE----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY-RLDESTG----YIDYEQLEKSAALFRPKLIVAGAS 234 (519)
Q Consensus 164 ~pGD----~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~-~~d~~~~----~iD~d~l~~~i~~~k~klIi~~~s 234 (519)
++|| +|++++..+.+....... ..+.....-.+ +.. ++. ..|++++++.+++ ++++|++.+.
T Consensus 114 ~~G~~~r~~vi~~~~~yhg~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~-~~~avivep~ 184 (389)
T PRK01278 114 GKGHPERYRIITFEGAFHGRTLATIA-------AGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITP-NTAAILIEPI 184 (389)
T ss_pred hcCCCCCCEEEEECCCcCCCcHHHHh-------ccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCC-CeEEEEEecc
Confidence 6787 899888655443221111 11110000000 000 111 2589999999976 8999999955
Q ss_pred c--cc----ccccHHHHHHHHhhcCCEEEehhhhhhhccccCC-CC-CCCC-CCeEEEEcCCCcc-cCCCcceEEeeccc
Q 010058 235 A--YA----RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSL-RGPRGAMIFFRKGV 304 (519)
Q Consensus 235 n--~g----~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~-~p~~-~~di~~~S~~K~l-~GprgG~i~~~~~~ 304 (519)
+ .| ...++++|+++|++||+++|+|++|. |+...+. .. ..+. ..|++++ +|++ +|++.|++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~t~--sK~l~~G~~ig~~~~~~-- 259 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIMAV--AKGIGGGFPLGACLATE-- 259 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEEEE--ehhccCCcceEEEEEcH--
Confidence 4 33 22368999999999999999999976 4432221 00 0001 2566655 5887 467789999987
Q ss_pred ccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCE-Eec
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYD-LVS 381 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~ 381 (519)
++.+.+......... +.+....++..++++.+.+. .+.+++.++.+.+.+.|+++ ... ++.
T Consensus 260 ------------~~~~~~~~~~~~~t~-~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 323 (389)
T PRK01278 260 ------------EAAKGMTPGTHGSTY-GGNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIE 323 (389)
T ss_pred ------------HHHhccCCCCCCCCC-CccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCcee
Confidence 455544332222222 33445555555667765432 33455666666666666553 121 222
Q ss_pred CC-CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 382 GG-TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 382 ~~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.. ....+.++.+.. +..++.+.|.+.||.+. |+. .+.|||+++...+ ++|++++++.|.+++.
T Consensus 324 ~v~g~G~~~~i~~~~---~~~~~~~~l~~~GV~~~----p~~-----~~~lR~~p~~~~~----~~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 324 EVRGKGLLLGLKCVV---PNRDLVQALRDEGLLTV----GAG-----DNVVRLLPPLIIT----EEEIDEALERLERAAE 387 (389)
T ss_pred eEecccEEEEEEEec---CHHHHHHHHHHCCeEEe----ecC-----CCEEEEeCCcccC----HHHHHHHHHHHHHHHH
Confidence 10 112233444421 46677777777799985 442 4689999887677 8999999999998875
No 253
>PRK05939 hypothetical protein; Provisional
Probab=99.77 E-value=4.9e-17 Score=167.24 Aligned_cols=157 Identities=14% Similarity=0.143 Sum_probs=121.1
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
|++....+| +.++++.|.+. .|.++||..|+.+++.++++|||+|++++..|+++..... .+...|
T Consensus 45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~-----~l~~~G 110 (397)
T PRK05939 45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFG-----TLRGLG 110 (397)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHH-----HHHhcC
Confidence 556777888 88889999876 4999999889888999999999999999988877654322 112234
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+..++ . .|++++++++++ +|++|+++ ++| +|...|+++|.++|+++|+++++|+++..+...
T Consensus 111 ~~v~~v~--~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 176 (397)
T PRK05939 111 VEVTMVD--A------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLF----- 176 (397)
T ss_pred CEEEEEC--C------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence 4444432 1 389999999987 89999988 677 888999999999999999999999998766432
Q ss_pred CCCC-CCeEEEEcCCCcccCCCc--ceEEe
Q 010058 274 SPFE-YADVVTTTTHKSLRGPRG--AMIFF 300 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~l~Gprg--G~i~~ 300 (519)
.|.. ++|+++.|+||+++|+.. |.+++
T Consensus 177 ~~~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 177 RPKDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred CccccCCEEEEecCeecccCCCCeEEEEEe
Confidence 1222 799999999999987543 44444
No 254
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.76 E-value=2.3e-16 Score=163.51 Aligned_cols=298 Identities=16% Similarity=0.156 Sum_probs=199.4
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHh
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTA 161 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~a 161 (519)
..+..+++.+.+++...+.... +.++. | ....++|+.+..++++++|++.+. .-.+|+|++ +|+.++.+
T Consensus 69 ~~~~~~~~~a~~~~~~~~~~nl--~d~~~--~---p~a~~~E~~~v~~l~~l~~~~~~~---~G~~t~GgTean~lal~a 138 (460)
T COG0076 69 FCPTRVPPVAAELLVSALNKNL--GDPDE--S---PAAAELEERVVNMLSDLLGAPEEA---SGTFTSGGTEANLLALLA 138 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhhcC--CCccc--C---hhHHHHHHHHHHHHHHHhCCCCCC---ceEEEcChHHHHHHHHHH
Confidence 3444567778888888776633 33332 2 356789999999999999996432 245566666 88865555
Q ss_pred hcC-----C---CC------EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCc
Q 010058 162 LLK-----P---HE------RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPK 227 (519)
Q Consensus 162 ll~-----p---GD------~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~k 227 (519)
.-+ . +. +|+++...|.+.. . .+.+.|...+.++.. +.+..+|++++++++.+ .+-
T Consensus 139 ar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~---K-----aa~~lG~~~~~v~~~--~~~~~id~~~l~~~i~~-~t~ 207 (460)
T COG0076 139 ARERWRKRALAESGKPGGKPNIVCSETAHFSFE---K-----AARYLGLGLRRVPTV--PTDYRIDVDALEEAIDE-NTI 207 (460)
T ss_pred HHHHHHHHhhhcccccCCCCeEEecCcchhHHH---H-----HHHHhCCCceeEEec--cCccccCHHHHHHHHHh-hcc
Confidence 311 1 11 5776664443332 2 455667777777643 33689999999999998 443
Q ss_pred E--EEEc--cccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC----CCCCCCeEEEEcCCCcccCCCc-ceE
Q 010058 228 L--IVAG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP----SPFEYADVVTTTTHKSLRGPRG-AMI 298 (519)
Q Consensus 228 l--Ii~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~----~p~~~~di~~~S~~K~l~Gprg-G~i 298 (519)
. |+.. .+.+|.+.|+++|.+||++++++++||+|....+.+..-.. ..++.+|.++.++||++..|.+ |++
T Consensus 208 ~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~i 287 (460)
T COG0076 208 GGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVV 287 (460)
T ss_pred CceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEE
Confidence 3 5544 44489999999999999999999999998433233222111 2234899999999999988888 999
Q ss_pred EeecccccccccCcchhhhHHHHh--hhcccCC-------CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Q 010058 299 FFRKGVKEINKQGQEVMYAYEDKI--NQAVFPG-------LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~i--~~~~~~~-------~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~ 369 (519)
+.+++.. +.+.. .....++ ..++......+++.+.++.+..++|.+..++..+++++++
T Consensus 288 l~rd~e~------------l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la 355 (460)
T COG0076 288 LFRDEEA------------LRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLA 355 (460)
T ss_pred EEECHHH------------hhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHH
Confidence 9998521 11111 0111121 1144444466777888888888899999999999999999
Q ss_pred HHHHhcC-CEEecCCCCcceeeeeccCCC-Cc-HHHHHHhhcccCeEEcc
Q 010058 370 RSLLERG-YDLVSGGTENHLVLVNLRNKG-ID-GSRVEKVLESVHIAANK 416 (519)
Q Consensus 370 ~~L~~~g-~~~~~~~~~~~~~~v~~~~~~-~~-~~~~~~~L~~~gI~v~~ 416 (519)
+.|++.| ++++.++ .+.++.++.++ .+ ..+....+++.|..+..
T Consensus 356 ~~l~~~~~~e~~~~p---~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~ 402 (460)
T COG0076 356 EELEKLGDFELVNEP---ELPIVAFRLKDDEDTLADLSERLDRRGWQVPA 402 (460)
T ss_pred HHHHhCCCcEeecCC---ccceEEEEcCCcccchhchHHHHHhcCceeec
Confidence 9999996 9988754 35555554422 11 33445566667777754
No 255
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=8.4e-17 Score=163.96 Aligned_cols=214 Identities=12% Similarity=0.058 Sum_probs=150.0
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
+++..+.+| ++++++-|.+. .+.+.||+.|+.+++.++++|||+|++.+..|++........ ..-.|
T Consensus 60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~----l~~~G 126 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKI----LSKLG 126 (395)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHH----HHhcC
Confidence 456677788 88888888765 488899999988899999999999999887776654422110 11124
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcC--CEEEehhhhhhhccccCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQK--AVMLADMAHISGLVAAGV 271 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~--~~livD~ah~~g~~~~~~ 271 (519)
..+..+ + ..|.+++++++++ +||+|++. ++| ++...|+++|+++|+++| +++++|.++..|.. .+.
T Consensus 127 i~v~~v----d----~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~p 196 (395)
T PRK08114 127 VTTTWF----D----PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKA 196 (395)
T ss_pred cEEEEE----C----CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCH
Confidence 433333 2 2478999999987 89999998 777 789999999999999984 99999999887765 333
Q ss_pred CCCCCCCCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHH
Q 010058 272 IPSPFEYADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ 348 (519)
Q Consensus 272 ~~~p~~~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~ 348 (519)
... ++|+++.|.||+|.|+. +|.++.++ ++.+.+..... ..|... ....+ ...++-
T Consensus 197 l~~---GaDivv~S~tKyl~Ghsdv~~G~v~~~~--------------~~~~~l~~~~~--~~G~~~-~p~~a-~l~~rg 255 (395)
T PRK08114 197 LDF---GIDISIQAGTKYLVGHSDAMIGTAVANA--------------RCWEQLRENSY--LMGQMV-DADTA-YMTSRG 255 (395)
T ss_pred HHc---CCcEEEEcCcccccCCCcceeEEEEcCH--------------HHHHHHHHHHH--hccCCC-CHHHH-HHHHcC
Confidence 333 79999999999999984 37776655 33333322111 112211 11111 122232
Q ss_pred hcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 349 VKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
+. .+.-..++..+|+..+++.|++.
T Consensus 256 l~--TL~lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 256 LR--TLGVRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred CC--cHHHHHHHHHHHHHHHHHHHHcC
Confidence 22 36677899999999999999988
No 256
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.75 E-value=2.3e-16 Score=175.21 Aligned_cols=323 Identities=13% Similarity=0.083 Sum_probs=203.3
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-cC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-LK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~-~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-l~ 164 (519)
+|+.|++++.+.... |. .|. .|... .++.-+.-...+..+++++|++.+ |+.++.|++ +..++++++ ++
T Consensus 117 ~P~~v~~~i~~~~~~-~T-ayt--PYqaEisQG~lqal~~~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a~~~~ 188 (993)
T PLN02414 117 VPPVILRNILENPGW-YT-QYT--PYQAEIAQGRLESLLNYQTMITDLTGLPMS----NASLLDEGTAAAEAMAMCNNIL 188 (993)
T ss_pred CCHHHHHHHHhChHH-Hh-hcC--CCchHHHHHHHHHHHHHHHHHHHHhCCChh----hEeecCChHHHHHHHHHHHhcc
Confidence 677777777654321 11 110 01110 133333334577999999999984 699999888 555566676 66
Q ss_pred CC--CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccccccccc
Q 010058 165 PH--ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASAYARLYD 241 (519)
Q Consensus 165 pG--D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn~g~~~d 241 (519)
+| |+|++.+..|++....+... ..-.|..++.++++. .| ...+ ..-.+++. ++++|.+.|
T Consensus 189 ~g~~~~VlVs~~~hP~~~~v~~t~----a~~~GieV~~v~~~~------~~------~~~~-~v~~vlvq~P~~~G~v~d 251 (993)
T PLN02414 189 KGKKKKFLIASNCHPQTIDVCQTR----ADGLGLEVVVADEKD------FD------YSSG-DVCGVLVQYPATDGEVLD 251 (993)
T ss_pred cCCCCEEEEcCccCHhHHHHHHHh----hhhcCCEEEEecchh------hc------cccC-ceEEEEEecCCCCeEEcC
Confidence 55 78999999998876654311 112344444554321 01 1111 23334444 566999999
Q ss_pred HHHHHHHHhhcCCEEEehhhhhhhccccC-CCCCCCCCCeEEEEcCCCcc-----cCCCcceEEeeccc-cccc--ccCc
Q 010058 242 YARIRKVCDKQKAVMLADMAHISGLVAAG-VIPSPFEYADVVTTTTHKSL-----RGPRGAMIFFRKGV-KEIN--KQGQ 312 (519)
Q Consensus 242 ~~~i~~ia~~~~~~livD~ah~~g~~~~~-~~~~p~~~~di~~~S~~K~l-----~GprgG~i~~~~~~-~~~~--~~g~ 312 (519)
+++|.++|+++|+++++ +++..++.... .... ++||+++++|||+ +||+.|+++++++. +..| +.|.
T Consensus 252 v~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~---GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~ 327 (993)
T PLN02414 252 YAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEW---GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGV 327 (993)
T ss_pred HHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhc---cCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCc
Confidence 99999999999999999 77766665442 2222 8999999999998 67777999999864 3333 2332
Q ss_pred ch------hhhHHHHhhhcccCCCCCCccHHHHHHHHHHH-----HHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 313 EV------MYAYEDKINQAVFPGLQGGPHNHTISGLAVAL-----KQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 313 ~~------~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al-----~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
+. .+.+.-.........-.++.+.-...++.+++ .++...++++..+++..++.++++.|.+.|+++..
T Consensus 328 s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~ 407 (993)
T PLN02414 328 SVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQS 407 (993)
T ss_pred ccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCC
Confidence 11 00000000000000012566664433333333 24455688999999999999999999888988865
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
+ . ++-.+.+... +..++.+.|.+.||.++.. ..+.+|+|++.++| ++|++.++++|..
T Consensus 408 ~-~--~f~~vt~~~~--~~~~v~~~L~~~gI~l~~~---------~~~~lrvs~~e~~T----~edId~L~~~l~~ 465 (993)
T PLN02414 408 L-P--FFDTVKVKCS--DADAIADAAAKVGINLRVV---------DANTVTVSFDETTT----LEDVDKLFKVFAG 465 (993)
T ss_pred C-C--CcCeEEEecC--CHHHHHHHHHHCCCeeEEe---------cCCeEEEEeeccCC----HHHHHHHHHHHcc
Confidence 4 2 2223333322 3577889999999988631 13469999999999 9999999999964
No 257
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.9e-16 Score=164.34 Aligned_cols=156 Identities=17% Similarity=0.167 Sum_probs=119.1
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
++.+.++| +.++++.|.++ .+.+.||+.|+.+++.+++++||+|++++..|++....... ...-.|.
T Consensus 63 ~p~~~~le----~~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~----~l~~~Gi 129 (433)
T PRK08134 63 NPTVAVLE----ERVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHY----TLRRFGI 129 (433)
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHH----HHhhCCe
Confidence 35566777 88889999876 38888888888888889999999999999888765432211 0011244
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
.+..++ .+ |++++++++++ +||+|++. ++| +|...|+++|.++|+++|+++++|++|..+....
T Consensus 130 ~v~~vd--~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~----- 195 (433)
T PRK08134 130 ETTFVK--PG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLR----- 195 (433)
T ss_pred EEEEEC--CC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 333332 21 79999999987 99999888 666 7799999999999999999999999988776532
Q ss_pred CCC-CCeEEEEcCCCcccCCCc---ceEE
Q 010058 275 PFE-YADVVTTTTHKSLRGPRG---AMIF 299 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gprg---G~i~ 299 (519)
|+. ++|++++|.||+++|+.. |+++
T Consensus 196 pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 196 PFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred chhcCCCEEEeccccccCCCCCceEEEEE
Confidence 333 799999999999977753 5544
No 258
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.75 E-value=2e-16 Score=161.97 Aligned_cols=210 Identities=16% Similarity=0.110 Sum_probs=142.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+....+| ++++++.|.+. .+.++||+.|+.+++ ++++|||+|+++++.|++.+..... .....|..
T Consensus 50 p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~----~~~~~gi~ 115 (380)
T PRK06176 50 PTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDK----VLVKNGLS 115 (380)
T ss_pred hhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHH----HHHhcCeE
Confidence 4566677 88899999876 499999998777444 6789999999998877666432211 11122333
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..+ + ..|++++++++++ ++++|++. ++| +|...|+++|.++|+++|+++|+|+++..+... .|
T Consensus 116 v~~v----d----~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~-----~p 181 (380)
T PRK06176 116 CTII----D----TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQ-----NP 181 (380)
T ss_pred EEEc----C----CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccC-----Cc
Confidence 3332 1 2389999999987 89999987 777 789999999999999999999999998754332 22
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCC-ccHHHHHHHHHHHHHhc
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGG-PHNHTISGLAVALKQVK 350 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~-~~~~~iaal~~al~~~~ 350 (519)
+. ++|++++|.+|++.|+. +|+++++++ ++.+++..... ..|. .... .+ ...+.-
T Consensus 182 ~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~-------------~~~~~~~~~~~--~~G~~~~~~--~~-~l~~~g-- 241 (380)
T PRK06176 182 LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE-------------ALAQEIAFFQN--AIGGVLGPQ--DS-WLLQRG-- 241 (380)
T ss_pred cccCCCEEEecCceeccCCccceeeEEEecHH-------------HHHHHHHHHHH--HhcCCCCHH--HH-HHHHhc--
Confidence 33 79999999999998875 588887653 33333321111 0111 1111 11 111111
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
...+....++..+++..+.+.|+++
T Consensus 242 l~tl~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 242 IKTLGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 1235666778888999999999887
No 259
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.75 E-value=9.6e-16 Score=158.99 Aligned_cols=318 Identities=14% Similarity=0.148 Sum_probs=187.9
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
..|.|.+|+.+.+.. + ++.+. .+ ..+...+++ +++++++|.+. .+.++||+.||.+++..+.
T Consensus 54 ~~p~v~~a~~~~~~~-~--~~~~~-~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-L--TLSSR-AF-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHHh-c--ccccc-cc-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 478999999888765 3 22111 11 223344444 77778888543 4788899999998888742
Q ss_pred -----CC-CCEEEEecCCCccc-ccccccccCCce-eeeeee-eEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEc
Q 010058 164 -----KP-HERIMALDLPHGGH-LSHGYQTDTKKI-SAVSIF-FETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAG 232 (519)
Q Consensus 164 -----~p-GD~Vl~~~~~~~~~-~~~~~~~~~~~v-~~~g~~-~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~ 232 (519)
.+ .+.|+.....|.+. ............ ...+.. ...+.++ ..|++++++.+.+. +..+|++.
T Consensus 120 ~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~avi~E 193 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPNVCAFIVE 193 (401)
T ss_pred hhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCCEEEEEEe
Confidence 23 45666666553322 110000000000 000000 0011111 12789999888642 34566665
Q ss_pred --ccccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccC--CCcceEEee
Q 010058 233 --ASAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRG--PRGAMIFFR 301 (519)
Q Consensus 233 --~sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~G--prgG~i~~~ 301 (519)
.+..|...+ +++|+++|++||+++|+|++| .|+...+.. ....+ ..|++++| |.++| ++.|+++++
T Consensus 194 ~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~ 270 (401)
T TIGR01885 194 PIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVLAD 270 (401)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEEEc
Confidence 233565554 899999999999999999998 454322211 00001 35888776 98864 566888888
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
+ ++.+.+.........++ +....++..++++.+..+ ...++..++.+++.+.|++++..++.
T Consensus 271 ~--------------~i~~~~~~~~~~~t~~~-~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~~~~~~ 332 (401)
T TIGR01885 271 D--------------DVMLTIKPGEHGSTYGG-NPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLPKPIIT 332 (401)
T ss_pred H--------------HHHhhccCCCCCCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhccCCcee
Confidence 7 55554443222222333 344555556677766543 34567777889999999988544432
Q ss_pred C-CCCcceeeeeccCC--CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 382 G-GTENHLVLVNLRNK--GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 382 ~-~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
. .....+..+.+... +.+..++.+.|.++||.+. |. .++.+||+++...+ ++|++++++.|.++
T Consensus 333 ~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~----~~-----~~~~lRi~p~l~~t----~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 333 EVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAK----PT-----HGNIIRLAPPLVIT----EEQLDEGLEIIKKV 399 (401)
T ss_pred EEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEE----ec-----CCCEEEEeCCccCC----HHHHHHHHHHHHHH
Confidence 1 11222333333322 1245678888888999985 32 24689999987777 89999999999877
Q ss_pred H
Q 010058 459 V 459 (519)
Q Consensus 459 l 459 (519)
+
T Consensus 400 l 400 (401)
T TIGR01885 400 I 400 (401)
T ss_pred h
Confidence 5
No 260
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=3.5e-16 Score=159.92 Aligned_cols=211 Identities=14% Similarity=0.104 Sum_probs=140.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
.....+| +.++++.|.+. .+.+.||+.|+..++.++++|||+|++++..|++....... .....|..
T Consensus 61 pt~~~Le----~~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~----~l~~~Gi~ 127 (394)
T PRK09028 61 PTHFAFQ----AAIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDK----ILKGFGIE 127 (394)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHH----hhhhcceE
Confidence 4455666 77777777653 25556666688889999999999999998777555431110 01112333
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..+ +. -|.+.+++++.+ +||+|+++ ++| ++...|+++|+++|+++|+++++|+++..+.. ..|
T Consensus 128 v~~v----~~----~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-----~~P 193 (394)
T PRK09028 128 TTYY----DP----MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-----SRP 193 (394)
T ss_pred EEEE----CC----CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----CCc
Confidence 3222 21 146789988876 89999999 777 78899999999999999999999999876542 223
Q ss_pred CC-CCeEEEEcCCCcccCCCc---ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPRG---AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gprg---G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|+++.|.|||+.|+.. |+++.++ ++.+++..... ..|... ....+ ...++-+.
T Consensus 194 l~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~--------------~~~~~l~~~~~--~~G~~~-~p~~a-~l~~rgl~- 254 (394)
T PRK09028 194 FEMGVDISIQAATKYIVGHSDVMLGTATANE--------------KHWDQLREHSY--LMGQCT-SPDDV-YLAMRGLR- 254 (394)
T ss_pred cccCceEEEEeCCeEecCCCCEEEEEEECCH--------------HHHHHHHHHHH--hcCCCC-CHHHH-HHHHcccC-
Confidence 44 799999999999999853 7665554 33333321111 112111 11111 12223222
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
.+....++..+|+..+++.|++.
T Consensus 255 -TL~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 255 -TLGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred -cHHHHHHHHHHHHHHHHHHHhcC
Confidence 36777899999999999999998
No 261
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.9e-16 Score=164.07 Aligned_cols=153 Identities=18% Similarity=0.149 Sum_probs=116.1
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
++..+.+| +.+++++|.+. .+.++||+.|+.+++.++++|||+|++....|++....... .+.-.|.
T Consensus 68 ~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~----~l~~~Gi 134 (436)
T PRK07812 68 NPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHY----TLPKLGI 134 (436)
T ss_pred CchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHH----HhhcCeE
Confidence 34566677 88899999876 48999999999989999999999999998777665421110 0111233
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
.+..+ + + ..|++++++++++ ++++|++. ++| +|...|+++|.++|+++|+++++|++|..+... .
T Consensus 135 ~v~~v--d-d----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~-----~ 201 (436)
T PRK07812 135 EVSFV--E-D----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLI-----R 201 (436)
T ss_pred EEEEE--C-C----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-----C
Confidence 33332 1 2 1389999999887 89999887 666 899999999999999999999999998776543 2
Q ss_pred CCC-CCeEEEEcCCCcccCCCc
Q 010058 275 PFE-YADVVTTTTHKSLRGPRG 295 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gprg 295 (519)
|+. ++|+++.|+||+++|+.+
T Consensus 202 pl~~GaDivv~S~tK~lgg~G~ 223 (436)
T PRK07812 202 PLEHGADIVVHSATKYLGGHGT 223 (436)
T ss_pred chhcCCCEEEEecccccCCCCC
Confidence 333 799999999999987654
No 262
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=2.9e-16 Score=161.91 Aligned_cols=159 Identities=13% Similarity=0.164 Sum_probs=120.7
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
+++.+..+| +.++++.|..+ .|.+.||+.|+.+++.++++|||+|+++...|++....... .+...|
T Consensus 59 ~nPtv~~lE----~~la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~----~l~~~G 125 (432)
T PRK06702 59 GNPTLAAFE----QKLAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGV----SLRKLG 125 (432)
T ss_pred CCcHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHH----HHHHCC
Confidence 346677888 88889999876 38888999999989999999999999999887765442110 012234
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+..+ | ..+|++++++++++ +||+|++. ++| ++...|+++|+++|+++|+++++|++...+.. .
T Consensus 126 i~v~~v----d---~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~-----~ 192 (432)
T PRK06702 126 IDVTFF----N---PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-----C 192 (432)
T ss_pred CEEEEE----C---CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh-----C
Confidence 443333 2 34789999999997 99999988 665 67888999999999999999999998543322 2
Q ss_pred CCCC-CCeEEEEcCCCcccCCCc---ceEEe
Q 010058 274 SPFE-YADVVTTTTHKSLRGPRG---AMIFF 300 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~l~Gprg---G~i~~ 300 (519)
.|+. ++||++.|.+|++.|.-+ |.++.
T Consensus 193 ~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 193 QAFEHGANIIVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred ChhhcCCCEEEEccccccCCCcceeceEEEe
Confidence 2443 799999999999988765 55553
No 263
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.75 E-value=3.2e-16 Score=160.06 Aligned_cols=282 Identities=16% Similarity=0.128 Sum_probs=168.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
.....+| +.++++++ . ..|.++||+.|+..++.++++|||+|++++..+++....... .....|..
T Consensus 51 p~~~~Le----~~lA~l~~--~----~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~----~l~~~G~~ 116 (366)
T PRK07582 51 PTWRALE----AALGELEG--A----EALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALARE----YLAPLGVT 116 (366)
T ss_pred ccHHHHH----HHHHHHcC--C----CEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHH----HHhcCeEE
Confidence 4456666 67777772 2 258999999988888999999999999998666554321110 01123554
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ .+++ .+ .+.+ ++++|+++ ++| ++...|+++|.++|+++|+++++|++|..+. +.. |
T Consensus 117 v~~v~--~~~~-----~~----~~~~-~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~~~--p 179 (366)
T PRK07582 117 VREAP--TAGM-----AE----AALA-GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---GQR--P 179 (366)
T ss_pred EEEEC--CCCh-----HH----Hhcc-CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---ccC--c
Confidence 54443 2211 11 2233 78999988 666 6788999999999999999999999975321 211 2
Q ss_pred CC-CCeEEEEcCCCcccCCCc---ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPRG---AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gprg---G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|++++|+||+++|+.| |+++++++ ++.+++...... ....++.... ..++..+.
T Consensus 180 ~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~-------------~l~~~l~~~~~~-~g~~~~~~~a---~l~~r~l~- 241 (366)
T PRK07582 180 LELGADLVVASDTKALTGHSDLLLGYVAGRDP-------------ELMAAVERWRLL-AGAIPGPFEA---WLAHRSLG- 241 (366)
T ss_pred hhcCCcEEEecccccccCCCCeeEEEEEcCcH-------------HHHHHHHHHHHH-hCCCCCHHHH---HHHHhccc-
Confidence 22 689999999999988765 88887643 444443321110 1112222211 12223232
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc-CCE-EecCCC---C----------cceeeeeccCCCCcHHHHHHhhcccCeEEcc
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER-GYD-LVSGGT---E----------NHLVLVNLRNKGIDGSRVEKVLESVHIAANK 416 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~---~----------~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~ 416 (519)
.++...++..+|+..+++.|++. .+. +..|+- . .+-.++.+... +..++.++|+..++....
T Consensus 242 -tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--~~~~~~~~~~~l~~~~~~ 318 (366)
T PRK07582 242 -TLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--DAAAAERFVAASRLVVAA 318 (366)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--CHHHHHHHHHhCCcceec
Confidence 35666788899999999999998 443 332221 1 01223333222 456677788777765532
Q ss_pred cccCCCCC----------CCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 417 NTVPGDVS----------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 417 ~~~p~~~~----------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
.++-+..+ ...++.||+|++.-+. ++.++.+.++|
T Consensus 319 ~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~----~dli~dl~~al 363 (366)
T PRK07582 319 TSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDT----DDLVADLERAL 363 (366)
T ss_pred ccCCCccchhhhHHHcCCCCCCCeEEEEeccCCH----HHHHHHHHHHH
Confidence 22211100 0224679999886444 44444444444
No 264
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.8e-16 Score=164.53 Aligned_cols=159 Identities=18% Similarity=0.152 Sum_probs=118.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
+.....+| +.++++.|.+. .+.++||+.|+.+++.++++|||+|++++..|++....... .....|.
T Consensus 63 ~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~----~~~~~Gv 129 (431)
T PRK08248 63 NPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAH----TLPKLGI 129 (431)
T ss_pred CchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHH----HHHhCCE
Confidence 34566677 88889999765 48888998898889999999999999998777665432211 1112344
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
.+..++ . .|++++++++++ ++++|+++ ++| +|...|+++|.++|+++|+++|+|+++..+... .
T Consensus 130 ~v~~vd--~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~-----~ 195 (431)
T PRK08248 130 TVKFVD--P------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLL-----R 195 (431)
T ss_pred EEEEEC--C------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccC-----C
Confidence 444432 1 389999999987 89999988 666 789999999999999999999999997644322 2
Q ss_pred CCC-CCeEEEEcCCCcccCCCc---ceEEeec
Q 010058 275 PFE-YADVVTTTTHKSLRGPRG---AMIFFRK 302 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gprg---G~i~~~~ 302 (519)
|+. ++|+++.|.||+++|+.. |+++.+.
T Consensus 196 pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 196 PIEHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred hhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 233 799999999999988753 5555443
No 265
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=4.8e-16 Score=161.56 Aligned_cols=226 Identities=18% Similarity=0.141 Sum_probs=148.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
.....+| +.++++.|.+. .+.+.||+.|+.+++.++++|||+|++.+..|++....... .....|..
T Consensus 63 p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~----~~~~~G~~ 129 (427)
T PRK05994 63 PTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGH----AFKSFGWQ 129 (427)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHH----HHHhcCcE
Confidence 3455666 88889999875 48899999999989999999999999999888765432110 01112433
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..+ + ..|++++++++++ ++++|++. ++| +|...|+++|.++|+++|+++++|++|..+... .|
T Consensus 130 v~~v----d----~~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-----~p 195 (427)
T PRK05994 130 VRWA----D----ADDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-----RP 195 (427)
T ss_pred EEEE----C----CCCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-----Cc
Confidence 3333 2 1278999999987 89999998 666 789999999999999999999999998866432 23
Q ss_pred CC-CCeEEEEcCCCcccCCCc---ceEEeeccccccc------------ccCcchhh--------hHHHHhhhcccCCCC
Q 010058 276 FE-YADVVTTTTHKSLRGPRG---AMIFFRKGVKEIN------------KQGQEVMY--------AYEDKINQAVFPGLQ 331 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gprg---G~i~~~~~~~~~~------------~~g~~~~~--------~~~~~i~~~~~~~~~ 331 (519)
+. ++|+++.|.||+++|+.+ |+++......... ..|+-... ++..+...... .
T Consensus 196 l~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 272 (427)
T PRK05994 196 IEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRD---L 272 (427)
T ss_pred cccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHh---c
Confidence 33 799999999999987764 5555333211100 00111010 00011111111 1
Q ss_pred CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CC
Q 010058 332 GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GY 377 (519)
Q Consensus 332 g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 377 (519)
|.. +..+.| +..+..+ ..++...++..+|+..+.+.|++. ++
T Consensus 273 G~~-~~~~~A-~l~~~~l--~tL~~r~~~~~~~a~~la~~L~~~p~v 315 (427)
T PRK05994 273 GPA-ISPFNA-FLILTGI--ETLPLRMQRHSDNALAVAEWLKGHPKV 315 (427)
T ss_pred CCC-CCHHHH-HHHHcCc--ccHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 221 111111 1233333 347888999999999999999988 44
No 266
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.74 E-value=6.3e-16 Score=159.92 Aligned_cols=309 Identities=17% Similarity=0.176 Sum_probs=187.3
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+|+.+.+.+-+ +.+.. + ..+...+++ ++++++++.+. ...++||+.||.+++....
T Consensus 52 ~~p~v~~a~~~~~~~~~---~~~~~-~-~~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~ 117 (397)
T TIGR03246 52 AHPELVKALIEQADKLW---HIGNG-Y-TNEPVLRLA----KKLVDATFADK-----VFFCNSGAEANEAALKLARRYAL 117 (397)
T ss_pred CCHHHHHHHHHHHHhcc---cccCc-c-CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 47899999988876522 11111 1 122233343 77777776542 3777889989998888651
Q ss_pred ----CCCCEEEEecCC-CcccccccccccCCceeeeee------------eeEEEeeeeCCCCCCCCHHHHHHHhhhhCC
Q 010058 164 ----KPHERIMALDLP-HGGHLSHGYQTDTKKISAVSI------------FFETMPYRLDESTGYIDYEQLEKSAALFRP 226 (519)
Q Consensus 164 ----~pGD~Vl~~~~~-~~~~~~~~~~~~~~~v~~~g~------------~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~ 226 (519)
...++|+..+-. ||.+... +.+.+. .+..++ .-|++++++.+.+ ++
T Consensus 118 ~~~~~~r~~ii~~~~~yHG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~ 180 (397)
T TIGR03246 118 DKHGADKSEIVAFKNSFHGRTLFT--------VSVGGQPKYSQGFAPLPGGIKHAP--------YNDLAAAKALISD-KT 180 (397)
T ss_pred hcCCCCCCEEEEECCCcCCccHHH--------HHhcCCcccccCCCCCCCceEEeC--------CCCHHHHHHHhcc-Ce
Confidence 123566666533 4433211 111111 011111 1378999998876 78
Q ss_pred cEEEEcccc--cc----ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCCcc-cCCCcc
Q 010058 227 KLIVAGASA--YA----RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSL-RGPRGA 296 (519)
Q Consensus 227 klIi~~~sn--~g----~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K~l-~GprgG 296 (519)
++|++.|.+ .| ....+++|+++|++||+++|+|++| .|+-..+... .-++ ..|++++ .|.| +|.+.|
T Consensus 181 aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~t~--~K~lggG~pig 257 (397)
T TIGR03246 181 CAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDILTS--AKALGGGFPIG 257 (397)
T ss_pred EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEEEe--ehhhhCCccee
Confidence 999998544 33 2344899999999999999999998 5553222110 0011 3588765 4888 566678
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
++++++ ++.+.+.........+ .+....++..++++.+.. ++..++++++.++|.+.|++++
T Consensus 258 av~~~~--------------~i~~~~~~~~~~~t~~-~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~ 319 (397)
T TIGR03246 258 AMLTTT--------------EIAAHLKVGTHGTTYG-GNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKIN 319 (397)
T ss_pred EEEEcH--------------HHHHhccCCCcCCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHH
Confidence 888887 5555543322222223 334445555566766533 3467888889999999988864
Q ss_pred --CEEecCCC-CcceeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHH
Q 010058 377 --YDLVSGGT-ENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVA 452 (519)
Q Consensus 377 --~~~~~~~~-~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~ 452 (519)
+.++.... ...+..+.+.+. ......+.+.|.+.||.+. +. +++.+|++++...+ ++|+++++
T Consensus 320 ~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~----~~-----g~~~lR~~p~~~~t----~~~i~~~~ 386 (397)
T TIGR03246 320 ARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIAL----IA-----GPNVVRFAPSLVIS----DDDIDEGL 386 (397)
T ss_pred hcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEe----ec-----CCCEEEEeCCCCCC----HHHHHHHH
Confidence 22222111 122333333221 1134567778888999985 21 23689999888888 99999999
Q ss_pred HHHHHHHHH
Q 010058 453 EFFDAAVKL 461 (519)
Q Consensus 453 ~~l~~~l~~ 461 (519)
+.|.+++..
T Consensus 387 ~~l~~~l~~ 395 (397)
T TIGR03246 387 ARFERAIEQ 395 (397)
T ss_pred HHHHHHHHH
Confidence 999988863
No 267
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.74 E-value=1.3e-15 Score=153.06 Aligned_cols=346 Identities=15% Similarity=0.162 Sum_probs=223.6
Q ss_pred eeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHH
Q 010058 79 LELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 79 i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~ 156 (519)
|+|-.... .+++...+||.. . ..-|++.+.+..|| +.++++||.+. -+.+++|..++.
T Consensus 44 IDLrSDTgT~apS~~m~aAM~~--G---------DD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~ 103 (467)
T TIGR02617 44 IDLLTDSGTGAVTQSMQAAMMR--G---------DEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQ 103 (467)
T ss_pred EECccCCCCCCCCHHHHHHHHc--C---------CcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHH
Confidence 55543222 478888888874 1 12356667777888 88889999986 377789988999
Q ss_pred HHHHhhcC-CCCEEEEecC----CCcccccccccccCCceeeeeeeeEEEeee------e-CCCCCCCCHHHHHHHhhhh
Q 010058 157 QVYTALLK-PHERIMALDL----PHGGHLSHGYQTDTKKISAVSIFFETMPYR------L-DESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 157 ~~~~all~-pGD~Vl~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~------~-d~~~~~iD~d~l~~~i~~~ 224 (519)
.++..+++ |||++.+-.. .|..|+..+. ..+.+.|..+..++.+ . .+..+.+|++++++++.++
T Consensus 104 Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~----g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~ 179 (467)
T TIGR02617 104 IYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQ----GHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEV 179 (467)
T ss_pred HHHHhhcccccccccccccccccceEEEEecch----HHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhc
Confidence 88889988 8998885442 3444443211 0234455554443211 1 1235789999999999863
Q ss_pred ---CCcEEEEc-ccc--cccccc---HHHHHHHHhhcCCEEEehhhhhhh-c--------cccCCCCCC-----CCCCeE
Q 010058 225 ---RPKLIVAG-ASA--YARLYD---YARIRKVCDKQKAVMLADMAHISG-L--------VAAGVIPSP-----FEYADV 281 (519)
Q Consensus 225 ---k~klIi~~-~sn--~g~~~d---~~~i~~ia~~~~~~livD~ah~~g-~--------~~~~~~~~p-----~~~~di 281 (519)
+...+... .+| -|.+.+ +++++++|++||+.++.|+|..+. . .+.+....- +.++|.
T Consensus 180 g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDs 259 (467)
T TIGR02617 180 GPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADM 259 (467)
T ss_pred CCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCE
Confidence 22333333 334 355555 568888999999999999987653 2 122332111 248999
Q ss_pred EEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhhccc--CC--CCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 282 VTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVF--PG--LQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 282 ~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~--~~--~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
+++|.+|.+..|-||+|+++++.- +++.++.+.... .+ ..|+..---+.|++++|.+..+ +.|
T Consensus 260 vt~slsKglgApvGg~Lag~d~~~----------~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~---~~y 326 (467)
T TIGR02617 260 LAMSAKKDAMVPMGGLLCFKDDSF----------FDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDW 326 (467)
T ss_pred EEEEcCCCCCCcccceEEecchhH----------HHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhccc---HHH
Confidence 999999999999999999998510 022233222211 11 1377777888899999887654 456
Q ss_pred HHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccC-------CCCcHHHHHHhh-cccCeEEcc-ccc-----CCCC
Q 010058 358 QEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRN-------KGIDGSRVEKVL-ESVHIAANK-NTV-----PGDV 423 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~-------~~~~~~~~~~~L-~~~gI~v~~-~~~-----p~~~ 423 (519)
.++.....++|.+.|.+.|++++. +..|-+++|... ....+..+...| .+.||..-- .++ |...
T Consensus 327 l~~ri~qv~yl~~~L~~~Gvpi~~--~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~ 404 (467)
T TIGR02617 327 LAYRINQVQYLVNGLEEIGVVCQQ--AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTG 404 (467)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEe--cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCC
Confidence 777778889999999999999987 556777777432 234555565555 457775321 222 1111
Q ss_pred CCCC--CCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 010058 424 SAMV--PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIK 466 (519)
Q Consensus 424 ~~~~--~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~ 466 (519)
.... -.-+|+..+- |=.+.+.|+.+++.|..+.++...++
T Consensus 405 ~~~~~~~el~RlaipR---rvyt~~h~d~v~~~~~~~~~~~~~i~ 446 (467)
T TIGR02617 405 KQLPCPAELLRLTIPR---ATYTQTHMDFIIEAFKHVKENAPNIK 446 (467)
T ss_pred ccCCCccceeeecccc---ccccHhHHHHHHHHHHHHHhhhhhcC
Confidence 1111 2468998764 33457999999999999998776654
No 268
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=4.1e-16 Score=159.69 Aligned_cols=211 Identities=16% Similarity=0.126 Sum_probs=143.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
.....+| +.+++++|.+. .+.+.||+.++.++ .++++|||+|+++++.|++.+..... .....|..
T Consensus 50 p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~-~~~l~~Gd~Viv~~~~y~~~~~~~~~----~~~~~G~~ 115 (377)
T PRK07671 50 PTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAV-MMLFSSGDHVILTDDVYGGTYRVMTK----VLNRFGIE 115 (377)
T ss_pred hHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHH-HHHhCCCCEEEECCCccchHHHHHHH----HHhcCCeE
Confidence 4466666 88999999875 48899998876644 46889999999999877654332110 01112433
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ ..|++++++++++ ++|+|+++ ++| +|...|+++|.++|+++|+++++|+++..+... .|
T Consensus 116 v~~v~--------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~-----~p 181 (377)
T PRK07671 116 HTFVD--------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQ-----SP 181 (377)
T ss_pred EEEEC--------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccC-----Ch
Confidence 33332 2389999999987 89999988 777 789999999999999999999999997543322 23
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
+. ++|++++|.+|++.|+. +|+++++++ ++.+++....... .+.... ..+ ..+++.+.
T Consensus 182 ~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~-------------~l~~~~~~~~~~~-g~~~~~-~~a--~l~~~~l~- 243 (377)
T PRK07671 182 ISLGADIVLHSATKYLGGHSDVVAGLVVVNSP-------------ELAEDLHFVQNST-GGILGP-QDS--WLLLRGLK- 243 (377)
T ss_pred hhhCCeEEEecCcccccCCccceeEEEEeCcH-------------HHHHHHHHHHHhh-cCCCCH-HHH--HHHHcCcC-
Confidence 33 78999999999999885 487777653 3444333211110 111111 111 12223222
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
.+....++..+|+..+.+.|++.
T Consensus 244 -tl~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 244 -TLGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHcC
Confidence 35667888899999999999987
No 269
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.74 E-value=1.9e-16 Score=163.01 Aligned_cols=297 Identities=20% Similarity=0.204 Sum_probs=200.2
Q ss_pred HHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 125 SLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 125 ~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
.++++.+++.||+++. .++++||+ +|.+++++++.|||.|++....|-++.. ++.++|.....+.-
T Consensus 73 ~eAqe~aA~~fgAd~t-----yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~--------glilaGa~Pvyl~p 139 (557)
T COG1982 73 KEAQELAARVFGADHT-----YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHH--------GLILAGATPVYLEP 139 (557)
T ss_pred HHHHHHHHHHhCCCce-----EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHH--------HHHHcCCceEEecC
Confidence 4456999999999983 77889998 9999999999999999988866666543 34456665555433
Q ss_pred eeCCCC---CCCCHHHHHHHhhhhC-C-cEEEEc-cccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC-
Q 010058 204 RLDEST---GYIDYEQLEKSAALFR-P-KLIVAG-ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF- 276 (519)
Q Consensus 204 ~~d~~~---~~iD~d~l~~~i~~~k-~-klIi~~-~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~- 276 (519)
..|+.- +.|+.+.+.+.+.+++ . |++++. ++-+|...+.++|.+.++..++|+.+|++|-.-....+..+.+.
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~ 219 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL 219 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence 334322 4789999999887643 2 566666 44489999999999999999999999999865444333333222
Q ss_pred -CCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhH
Q 010058 277 -EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEY 354 (519)
Q Consensus 277 -~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~ 354 (519)
..+|+++-|+||.+++... .+|..++... --.++++.+..-...++|+.+.+|++.+|-.+....+.
T Consensus 220 ~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~-----------~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~ 288 (557)
T COG1982 220 NGGADFVTQSTHKLLAALSQASMIHVKDGRA-----------VNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGR 288 (557)
T ss_pred hcCceEEEechhhhhhhhhhhHHHhhCCCcc-----------CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhH
Confidence 3789999999999988765 6887775200 11234545444444578999999999986665554432
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhc-CCEEecCCC--------------------CcceeeeeccCCCCcHHHHHHhhccc
Q 010058 355 ---KAYQEQVLSNSSKFARSLLER-GYDLVSGGT--------------------ENHLVLVNLRNKGIDGSRVEKVLESV 410 (519)
Q Consensus 355 ---~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--------------------~~~~~~v~~~~~~~~~~~~~~~L~~~ 410 (519)
++......+.++.+++...+. ++.++.+.. |.-=+++.....|+++..+.+.|++.
T Consensus 289 ~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~ 368 (557)
T COG1982 289 ELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREH 368 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHc
Confidence 222556667777777777776 566665432 11112333335689999999999999
Q ss_pred CeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 411 HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 411 gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
||...++ ++.. .-+=+++.. |-...+++++.++..
T Consensus 369 gii~e~~---~d~~----~lll~~~~~----gk~~~lv~~L~~f~r 403 (557)
T COG1982 369 GIIPEET---GDYS----NLLLFSPGI----GKWQTLVDRLLEFKR 403 (557)
T ss_pred CCeeeec---CCce----eeEEeeecc----chHHHHHHHHHHHHH
Confidence 9988643 1110 011122211 233677777777777
No 270
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.74 E-value=2.1e-15 Score=146.60 Aligned_cols=308 Identities=14% Similarity=0.130 Sum_probs=191.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCC----CCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCc
Q 010058 116 GNEYIDMAESLCQKRALDAFQL----DPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKK 190 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~----~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~ 190 (519)
..++...++++..+-+.+.-|. +| .++.++.|++ ||.++...|.+|||..+++.+.++|.-....
T Consensus 119 dy~Gl~~frqa~A~Fm~~~r~~~v~fdP----~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~------ 188 (471)
T KOG0256|consen 119 DYHGLPSFRQAVAEFMERARGNRVKFDP----ERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLR------ 188 (471)
T ss_pred cccCchHHHHHHHHHHHHHhCCCCccCc----cceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccce------
Confidence 3345566777766766666654 55 3688888888 9998888899999999999988877643221
Q ss_pred eeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-----hCCcEEEEc-ccc-ccccccH---HHHHHHHhhcCCEEEehh
Q 010058 191 ISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL-----FRPKLIVAG-ASA-YARLYDY---ARIRKVCDKQKAVMLADM 260 (519)
Q Consensus 191 v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~-----~k~klIi~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ 260 (519)
...|.....+.+. ..+++.++.+++|++..+ .+.|.|++. |+| .|...+- ..+..+|.++++-||+|+
T Consensus 189 -~rTgveivpv~c~-Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DE 266 (471)
T KOG0256|consen 189 -WRTGVEIVPVHCS-SSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDE 266 (471)
T ss_pred -eccCceEEEEEee-cCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeeh
Confidence 1124333344332 235679999999988754 256666665 888 7877664 455667789999999999
Q ss_pred hhhhhccccCC--------CCCC--CCCCeEEEEcCCC--cccCCCcceEEeecccccccccCcchhhhHHHHhhhcccC
Q 010058 261 AHISGLVAAGV--------IPSP--FEYADVVTTTTHK--SLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFP 328 (519)
Q Consensus 261 ah~~g~~~~~~--------~~~p--~~~~di~~~S~~K--~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~ 328 (519)
.++ |.+.... ...+ .+..--++.|++| +|+|.|.|.|++.++ ++.....+...-
T Consensus 267 Iya-~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne-------------~VvsaA~kmssf 332 (471)
T KOG0256|consen 267 IYA-GSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE-------------DVVSAATKMSSF 332 (471)
T ss_pred hhc-ccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh-------------HHHHHHHHHhhc
Confidence 854 3332211 1111 1122234456667 457888899999885 343332222111
Q ss_pred CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC----CCcHH-H-
Q 010058 329 GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK----GIDGS-R- 402 (519)
Q Consensus 329 ~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~----~~~~~-~- 402 (519)
+.. ++..+.+.+....=++..+....+..++++..-+++.++|+++|++.+..+ ..-++|+|++.. ...++ +
T Consensus 333 ~~v-Ss~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~-AGlF~wvDlr~lL~s~tfe~El~L 410 (471)
T KOG0256|consen 333 GLV-SSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSN-AGLFCWVDLRKLLTSLTFEGELEL 410 (471)
T ss_pred cCC-cHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecC-CeeEEEEEhHHhcCcCChHHHHHH
Confidence 111 122222222111112332223356677788888899999999999998754 356778887642 11221 1
Q ss_pred HHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 403 VEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 403 ~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..+.+.+.++.++ ||.. ....+|.+|+++.... ++.++...+.|+..+.
T Consensus 411 w~~i~~~vklnlS----pG~s~~C~EpGWFRvcFAn~~-----~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 411 WERILDNVKLNLS----PGSSCHCHEPGWFRVCFANMS-----EETLEVAMRRLKQFLD 460 (471)
T ss_pred HHHHHHhhccccC----CCCcceecCCCeEEEEeccCC-----HHHHHHHHHHHHHHHH
Confidence 3455666788887 7776 5567899999987543 4556556666666664
No 271
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.73 E-value=3.5e-15 Score=154.87 Aligned_cols=318 Identities=17% Similarity=0.191 Sum_probs=187.3
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
.+|.|.+++.+.+.. + ++....++ .+.. ..+.+.++++++.+. .+.++||+.||.+++..+.
T Consensus 48 ~~p~v~~a~~~~~~~-~--~~~~~~~~--~~~~----~~~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-L--TLTSRAFY--NDVL----GLAEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-c--cccccccc--CHHH----HHHHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 478899999888754 3 22111111 2223 344477777777643 3788899989998888663
Q ss_pred ------CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee-eeCCC---CCCCCHHHHHHHhhhhCCcEEEEcc
Q 010058 164 ------KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY-RLDES---TGYIDYEQLEKSAALFRPKLIVAGA 233 (519)
Q Consensus 164 ------~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~-~~d~~---~~~iD~d~l~~~i~~~k~klIi~~~ 233 (519)
..+++|+..+-.+.+..... +...+.......+ +..+. -...|++++++.+...++++|++.+
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep 186 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTIGA-------CSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEP 186 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccHHH-------HhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcC
Confidence 13577887764432221111 1111100000000 00000 0123899999998644789998874
Q ss_pred c-c-cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-CCCCC--CCeEEEEcCCCcccC--CCcceEEeec
Q 010058 234 S-A-YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-PSPFE--YADVVTTTTHKSLRG--PRGAMIFFRK 302 (519)
Q Consensus 234 s-n-~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~~p~~--~~di~~~S~~K~l~G--prgG~i~~~~ 302 (519)
. | +|...+ +++|+++|++||+++|+|++|. |+...+.. ..... ..|++++| |++.+ ++.|++++++
T Consensus 187 ~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 187 IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLAND 263 (400)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcH
Confidence 3 3 677776 9999999999999999999984 33211110 00001 35888776 98864 3679999988
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----CCE
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER----GYD 378 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~ 378 (519)
++.+.+.........++ +....++..++++.+.+.+ +.++..++.+.+.+.|.+. ++.
T Consensus 264 --------------~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~ 325 (400)
T PTZ00125 264 --------------DVMLVIKPGEHGSTYGG-NPLACAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLKKSPWV 325 (400)
T ss_pred --------------HHHhhccCCCCCCCCCc-CHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 55554433222222232 3334444455666654333 3455566677777777664 221
Q ss_pred -EecCCCCcceeeeeccC-CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 379 -LVSGGTENHLVLVNLRN-KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 379 -~~~~~~~~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
.+.+ ...+.++.+.. .+.+...+.+.|.+.||.+. |+ ..+.|||+++...+ ++|++++++.|.
T Consensus 326 ~~~~~--~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~----~~-----~~~~lRi~~~~~~~----~~~i~~~l~~l~ 390 (400)
T PTZ00125 326 KEIRG--KGLLNAIVFDHSDGVNAWDLCLKLKENGLLAK----PT-----HDNIIRFAPPLVIT----KEQLDQALEIIK 390 (400)
T ss_pred EEEec--ccEEEEEEEccCcchHHHHHHHHHHHCCeEEe----ec-----CCCEEEEECCccCC----HHHHHHHHHHHH
Confidence 1221 22344554432 23345667777878899985 33 24689999987777 899999999999
Q ss_pred HHHHHH
Q 010058 457 AAVKLA 462 (519)
Q Consensus 457 ~~l~~~ 462 (519)
+++...
T Consensus 391 ~~l~~~ 396 (400)
T PTZ00125 391 KVLKSF 396 (400)
T ss_pred HHHHHH
Confidence 988643
No 272
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=3.1e-16 Score=162.65 Aligned_cols=158 Identities=16% Similarity=0.167 Sum_probs=117.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
.....+| +.++++.|.+. .+.+.||+.|+..++.++++|||+|++.+..|++....... .+...|..
T Consensus 58 pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~----~l~~~gi~ 124 (425)
T PRK06084 58 PTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAH----TLPRIGIE 124 (425)
T ss_pred chHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHH----hcccceeE
Confidence 4456666 88889999764 48888999898889999999999999998777654332110 11112332
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..+ + ..|++++++++++ ++++|+++ ++| +|...|+++|.++|+++|+++|+|++|..+... .|
T Consensus 125 v~~~----d----~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-----~p 190 (425)
T PRK06084 125 TRFA----A----HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-----RP 190 (425)
T ss_pred EEEE----C----CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-----Ch
Confidence 2222 2 2489999999987 89999998 667 899999999999999999999999998766432 23
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeec
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRK 302 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~ 302 (519)
+. ++|++++|++|+++|+. ||+++.+.
T Consensus 191 ~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 191 FEHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred hhcCCCEEEECchhcccccccceeEEEEeCC
Confidence 33 69999999999998764 36666543
No 273
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=7.7e-17 Score=158.19 Aligned_cols=370 Identities=17% Similarity=0.159 Sum_probs=231.3
Q ss_pred hhhhcccCCCchhhhhhhhhhhcCHHHHHHHHHHHHhcc----------cCeeec--------CCCCCCcHHHHHHHhhH
Q 010058 38 QALNNEKAPAPWINQLNAPLEEIDPEIADIIELEKARQW----------KGLELI--------PSENFTSVSVMQAVGSV 99 (519)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~----------~~i~L~--------a~en~~~~~V~ea~~~~ 99 (519)
++||.+|.+.+..+-+++++-.++-....+++.-..... ..|||. .+..+..+.+.+++..
T Consensus 88 e~FY~Rriy~ri~Dc~~RPi~~VPG~~v~l~dR~S~D~n~tfk~tG~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~k- 166 (519)
T KOG1357|consen 88 ESFYSRRIYRRIRDCFERPICSVPGAWVDLMDRVSDDYNWTFKYTGTRSRCLNLGSYNYLGFAQSVGPCAEASLKSFDK- 166 (519)
T ss_pred HHHHHHHHHHHHhHhhcCCCcCCCCceEEeeeeeccCCCceEEeccceeeeeeecccccccccccCCcCChHHHHHHHH-
Confidence 578888877777777777776666665555544322111 123432 2333456777777654
Q ss_pred hhhccCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcc
Q 010058 100 MTNKYSEGYPGARYYGGN-EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGG 178 (519)
Q Consensus 100 l~~~~~~g~p~~~~y~~~-~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~ 178 (519)
|.-...++|..-|+ +...++| +..++++|.+. .+.+..|-..|...+.+|+.||.-|+...+.|.+
T Consensus 167 ----ygl~~css~~e~G~~~~hkelE----~l~A~f~g~e~-----a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaS 233 (519)
T KOG1357|consen 167 ----YGLSRCSSRHEAGTTEEHKELE----ELVARFLGVED-----AIVFSMGFATNSMNIPSLLGKGSLIISDELNHAS 233 (519)
T ss_pred ----hcccccccchhcccHHHHHHHH----HHHHHhcCCcc-----eEEEeccccccccCcceeecCCcceeeccccchh
Confidence 32233344443343 3355666 88889999986 3889999888887889999999999999988877
Q ss_pred cccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh----hCC-------cEEEEc---cccccccccHHH
Q 010058 179 HLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL----FRP-------KLIVAG---ASAYARLYDYAR 244 (519)
Q Consensus 179 ~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~----~k~-------klIi~~---~sn~g~~~d~~~ 244 (519)
... ++.++|...+... .+ |..+||+.+.+ .+| |++++. .+.-|.+.++.+
T Consensus 234 i~~--------GaRLSgAtiRVfk--HN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~ 297 (519)
T KOG1357|consen 234 LIT--------GARLSGATTRVFR--HN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPE 297 (519)
T ss_pred eec--------cccccCceEEEEe--cC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHH
Confidence 765 5667776655432 22 44555554432 222 355554 444689999999
Q ss_pred HHHHHhhcCCEEEehhhhhhhcccc-C--CCCCC---CCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhH
Q 010058 245 IRKVCDKQKAVMLADMAHISGLVAA-G--VIPSP---FEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAY 318 (519)
Q Consensus 245 i~~ia~~~~~~livD~ah~~g~~~~-~--~~~~p---~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~ 318 (519)
+.++++++.++++.|+||+.|.... | +...+ -..+|++.+++.|+++ --||+|.+++ ++
T Consensus 298 vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfg-a~GGyiagsk--------------~l 362 (519)
T KOG1357|consen 298 VVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFG-AAGGYIAGSK--------------EL 362 (519)
T ss_pred HHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcc-cccceecCcH--------------HH
Confidence 9999999999999999999887732 1 11111 1168999999999864 4589999998 55
Q ss_pred HHHhhhcccCCCCCCc-cHHHHHHHHHHHHHhc----CHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeec
Q 010058 319 EDKINQAVFPGLQGGP-HNHTISGLAVALKQVK----TPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNL 393 (519)
Q Consensus 319 ~~~i~~~~~~~~~g~~-~~~~iaal~~al~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~ 393 (519)
.+.+.........++. +.+...-...+++.+. ...-++..+++.+|+.+++..|+..|+-+.... ++..+.+.+
T Consensus 363 id~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~-dSpVvplll 441 (519)
T KOG1357|consen 363 IDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNN-DSPVVPLLL 441 (519)
T ss_pred HhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCC-CCCcceeee
Confidence 5543322111111221 1222222233444433 233578889999999999999999998776542 333333332
Q ss_pred cCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 394 RNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 394 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..... -..+.+.|.+.+|.+-....|. .|...+.+|+...+-++ .|+++++.+.+.++-.
T Consensus 442 ~~~~k-~~~f~r~~l~~nigvVvvgfPa--tpl~e~r~R~c~Sa~ht----~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 442 YGPAK-IVAFSREMLERNIGVVVVGFPA--TPLLESRARFCLSASHT----KEDLDRALEVIDRVGD 501 (519)
T ss_pred cCccc-ccHHHHHHHhcCceEEEEeCCC--chHHHhHHHhhhccccc----HHHHHHHHHHHhhhch
Confidence 22222 2235555555555443211222 35556789999888888 7999999988876553
No 274
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.72 E-value=2.4e-15 Score=150.83 Aligned_cols=344 Identities=13% Similarity=0.099 Sum_probs=213.3
Q ss_pred ccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCC--CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeC-CcH
Q 010058 76 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSL-SGS 152 (519)
Q Consensus 76 ~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p--~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~-sGs 152 (519)
.+..+++|++..+|++|++++.+.+.+....|.. +-.+ .+ +...++-+.+.+.++++|+++.+. .|++. +|+
T Consensus 3 ~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisH-Rs-~~F~~i~~~~~~~Lr~Ll~~P~~y---~Vlfl~Ggg 77 (364)
T PRK12462 3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSH-RS-SWFSSLLAQAEADLRDLLGIPDEY---GVVFLQGGS 77 (364)
T ss_pred cccceecCCCcCCCHHHHHHHHHHHhcccccCcccccccc-cc-HHHHHHHHHHHHHHHHHhCCCCCC---eEEEEeccH
Confidence 3467899999999999999999988773221211 1111 12 334556667889999999994322 24443 334
Q ss_pred H-HHHHHHHhhcCCCCEEE-EecCCCcccccccccccCCceeeeeeeeEEEeeee-CCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 153 P-ANFQVYTALLKPHERIM-ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL-DESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl-~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~-d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
+ ++.++...++.+||+++ +.. .|+++..+.- .....| .++.+.-.. ...+..++.++++ +.+ +.+.|
T Consensus 78 T~~~ea~~~Nll~~g~~~~~~~~---tG~fg~r~~~---ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~-d~~~v 147 (364)
T PRK12462 78 SLQFSMIPMNFSRPGAAAPEYVT---TGYWSRKAIG---EASRVA-AMRVVWDGAASGYRTLPSLAELD--WDA-RAPFR 147 (364)
T ss_pred HHHHHHHHHHcCCCCCcEEEEEe---CCHHHHHHHH---HHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCC-CCcEE
Confidence 4 88889999999999765 444 3333322211 111112 222221100 1112355666652 222 46777
Q ss_pred EEcccc--ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccc
Q 010058 230 VAGASA--YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 306 (519)
Q Consensus 230 i~~~sn--~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~ 306 (519)
.++.+. +|...+ ++.+.+++++++|+....+..+.++. ..|++.++.+|+|+ |.| ++++.+++...
T Consensus 148 ~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~-----~~dvi~agsQKnlg-P~Gltvvivs~~al~ 216 (364)
T PRK12462 148 HYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVE-----AYGMVYAHAQKNLG-PAGVTVAIIRRALLE 216 (364)
T ss_pred EEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChH-----HccEEEeeccccCC-CCceEEEEECHHHHh
Confidence 777444 787665 34444689999999876665554443 34999999999996 888 88888885321
Q ss_pred ccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH--hHHHHHHHHHHHHHHHHHHHHhcC-CEEecC-
Q 010058 307 INKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP--EYKAYQEQVLSNSSKFARSLLERG-YDLVSG- 382 (519)
Q Consensus 307 ~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~- 382 (519)
.....-...+++....+.. ...-||+...+.++..+++++.++ +++.+.++.++.++.+++.+.+.. +-....
T Consensus 217 ~~~~~~p~~ldy~~~~~~~---s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~ 293 (364)
T PRK12462 217 RVPDTLPPMLDFRTHVEHR---SNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAH 293 (364)
T ss_pred hccccCCchhhHHHHHhcC---CCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 1000001122333333222 123499999999999999999777 899999999999999999999983 433221
Q ss_pred CCCcceeeeec--cCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 383 GTENHLVLVNL--RNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 383 ~~~~~~~~v~~--~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
........+.+ .... -..++.+.+++.|+.-- -|+. .-+++|+|.-.-.+ .++++.+++++++.-+
T Consensus 294 ~~~RS~mnv~f~~~~~~-l~~~f~~~a~~~gl~~l----kGhr---~vgg~Ras~yna~~----~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 294 RAARSTMNVAFRFRQPR-LDTLFKEQSTEAGFCGL----SGHR---SIGGIRASLYNAVS----EQAVSRLCAFLKDFAI 361 (364)
T ss_pred hhhcCcceEEEEcCCHH-HHHHHHHHHHHCCCccc----cCCc---ccCceEEEcCCCCC----HHHHHHHHHHHHHHHH
Confidence 11222222333 2222 23456667778898763 3443 24679999765555 8999999999987654
No 275
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=4.8e-15 Score=146.51 Aligned_cols=325 Identities=16% Similarity=0.182 Sum_probs=196.1
Q ss_pred ccCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 010058 76 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s 150 (519)
+..|++.++-. -..|.+.+|+.+....-+ ..+.-||. +..+ ...+++.+..+ ..+. -+..+|
T Consensus 42 ~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~---h~sn~~~~-----~~~~-~la~~L~~~s~-~~d~---vff~NS 108 (404)
T COG4992 42 REYLDFAAGIAVNNLGHCHPALVEALKEQAEKLW---HVSNLFYN-----EPQA-ELAEKLVELSP-FADR---VFFCNS 108 (404)
T ss_pred CEeeeeccceeeeccCCCCHHHHHHHHHHHHHhh---hcccccCC-----hHHH-HHHHHHHhhCc-cccE---EEEcCC
Confidence 45577765533 247899999988655422 11222222 1222 23367777776 3332 256677
Q ss_pred cHHHHHHHHHhhc---C-C-CCEEEEecCCCcccccccccccCCceeeeeee-eEEEeeeeCCCC---CCCCHHHHHHHh
Q 010058 151 GSPANFQVYTALL---K-P-HERIMALDLPHGGHLSHGYQTDTKKISAVSIF-FETMPYRLDEST---GYIDYEQLEKSA 221 (519)
Q Consensus 151 Gs~a~~~~~~all---~-p-GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~-~~~v~~~~d~~~---~~iD~d~l~~~i 221 (519)
|+.||.+++...- . | .-+|+.+...+-|... + .+++.|.. +..-..++-+.- -.=|++++++++
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~-g------alS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai 181 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTL-G------ALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAI 181 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccc-e------eeeccCChhhccCCCCCCCCceecCCCCHHHHHHHh
Confidence 8889998887652 2 2 2367776644432211 0 23333322 111111111111 023889999999
Q ss_pred hhhCCcEEEEcccc--ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccc---------cCCCCCCCCCCeEEEEcC
Q 010058 222 ALFRPKLIVAGASA--YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVA---------AGVIPSPFEYADVVTTTT 286 (519)
Q Consensus 222 ~~~k~klIi~~~sn--~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~---------~~~~~~p~~~~di~~~S~ 286 (519)
++ +|.+|++.|-. -|. ..-+++++++|++||+++|.|+.|. |+-. .++ ..||++..
T Consensus 182 ~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~fA~e~~gV------~PDI~tla- 252 (404)
T COG4992 182 DE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLFAYEHYGV------EPDILTLA- 252 (404)
T ss_pred cc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-CCCccchHHHHHHhCC------CCCEEEee-
Confidence 98 99999998444 332 2237899999999999999999975 2211 133 34899887
Q ss_pred CCcccC-CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHH
Q 010058 287 HKSLRG-PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNS 365 (519)
Q Consensus 287 ~K~l~G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~ 365 (519)
|.|+| .+.|.+++++ ++.+.+.........|+. ....++..++++.+.++ ...+++++..
T Consensus 253 -K~LgGG~PigA~la~~--------------~~~~~~~~G~HgSTfGGN-pLacAv~~a~l~~l~~e---~ll~~v~~~g 313 (404)
T COG4992 253 -KALGGGFPIGAMLATE--------------EIASAFTPGDHGSTFGGN-PLACAVALAVLEVLLEE---GLLENVREKG 313 (404)
T ss_pred -ccccCCccceeeEEch--------------hhhhcCCCCcccCCCCcC-HHHHHHHHHHHHHHcch---hHHHHHHHHH
Confidence 99865 3447776765 444433333222333443 33344444567776654 4567788888
Q ss_pred HHHHHHHHhc--CCEEecCCCC-cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCC
Q 010058 366 SKFARSLLER--GYDLVSGGTE-NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 442 (519)
Q Consensus 366 ~~l~~~L~~~--g~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg 442 (519)
++|.+.|+++ .+.++..-.. .-+.-+.+... ....++.+.|.+.|+.+.. ..++.||+.++...+
T Consensus 314 ~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~-~~a~~~~~~~~~~gvL~~~---------a~~~ViR~~PpL~i~-- 381 (404)
T COG4992 314 EYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP-YRARDIVRALREEGVLVLP---------AGPNVIRFLPPLVIT-- 381 (404)
T ss_pred HHHHHHHHHHhhcCCceeeeecceeEEEEEecCc-ccHHHHHHHHHHCCeEEec---------CCCCeEEecCCccCC--
Confidence 8899988886 4444443111 22333444432 1467888999999999962 234689999998888
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 010058 443 FVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 443 ~~~~di~~l~~~l~~~l~~~ 462 (519)
++|++..++.|.+++...
T Consensus 382 --~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 382 --EEEIDEALDALERALAAA 399 (404)
T ss_pred --HHHHHHHHHHHHHHHHHh
Confidence 999999999999999754
No 276
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.72 E-value=6.3e-16 Score=157.63 Aligned_cols=211 Identities=17% Similarity=0.168 Sum_probs=142.3
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
+++.++++| ++++++.|.+. .|.+.||+.|+.+++.++++|||+|+++...+++.+..... .+...|
T Consensus 62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~----~~~~~G 128 (384)
T PRK06434 62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNK----VLKTLG 128 (384)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHH----HHHhcC
Confidence 557788888 78889999876 39999999998889999999999999987666665532211 122235
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+..++ +++. ..++ +...++++|++. ++| ++...|+++|+++|++++ +++|.++.++.. .
T Consensus 129 i~v~fvd--~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~-----~ 191 (384)
T PRK06434 129 IHVDYID--TDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN-----Q 191 (384)
T ss_pred cEEEEEC--CCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCccc-----C
Confidence 4444443 3321 1122 222378999988 666 778999999999999998 467999754322 2
Q ss_pred CCCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh
Q 010058 274 SPFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV 349 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~ 349 (519)
.|++ ++|++++|.||+++|+. ||+|+++++ ++.+++..... ..|......-+ +..+..+
T Consensus 192 ~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~-------------~~~~~~~~~~~--~~G~~~~~~~A--~l~~~gL 254 (384)
T PRK06434 192 NPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK-------------SIFNNLVERRK--TLGSNPDPIQA--YLALRGL 254 (384)
T ss_pred CchhcCCCEEEeecccccCCCCCceEEEEecCcH-------------HHHHHHHHHHH--hcCCCCCHHHH--HHHHhCC
Confidence 3444 79999999999998865 588887664 44444332110 11221111111 2233333
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 350 KTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
..++...++..+++..+.+.|++.
T Consensus 255 --~tL~~R~~r~~~~a~~~a~~L~~~ 278 (384)
T PRK06434 255 --KTLGLRMEKHNKNGMELARFLRDS 278 (384)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHcC
Confidence 347888999999999999999987
No 277
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1.5e-15 Score=154.98 Aligned_cols=220 Identities=14% Similarity=0.060 Sum_probs=147.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
+++..+.+| ++++.+-+.+. .|.++||+.|+.+++.++++|||+|++++..|++....... .....|
T Consensus 62 gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~----~l~~~G 128 (395)
T PRK05967 62 GTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDT----MLKRLG 128 (395)
T ss_pred CChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHH----HHHhcC
Confidence 445566666 77777776553 49999998888889999999999999998777765431110 112234
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+..+ +.+ +.+.+++++++ +||+|+++ ++| ++...|+++|+++|+++|+++++|+++..+...
T Consensus 129 i~v~~v----d~~----~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~----- 194 (395)
T PRK05967 129 VEVEYY----DPE----IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF----- 194 (395)
T ss_pred eEEEEe----CCC----CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-----
Confidence 444443 211 35789999987 89999999 666 779999999999999999999999997644322
Q ss_pred CCCC-CCeEEEEcCCCcccCCCc---ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh
Q 010058 274 SPFE-YADVVTTTTHKSLRGPRG---AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV 349 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~l~Gprg---G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~ 349 (519)
.|+. ++|+++.|.+|+++|... |+++.++ +..+++..... ..|.. .....+ ...++-+
T Consensus 195 ~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~--------------~~~~~l~~~~~--~~G~~-~~p~da-~l~~rgl 256 (395)
T PRK05967 195 RPLDFGVDISIHAATKYPSGHSDILLGTVSANE--------------KCWPQLLEAHG--TLGLC-AGPDDT-YQILRGL 256 (395)
T ss_pred ChhHcCCCEEEEecccccCCCCCeeEEEEEcCH--------------HHHHHHHHHHH--HcCCC-CCHHHH-HHHHcCc
Confidence 3444 799999999999877543 7666555 33332321111 11221 111111 1222322
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHHhc-CC-EEecC
Q 010058 350 KTPEYKAYQEQVLSNSSKFARSLLER-GY-DLVSG 382 (519)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~ 382 (519)
..+....++..+|+..+++.|++. .+ ++..|
T Consensus 257 --~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yP 289 (395)
T PRK05967 257 --RTMGIRLEHHRKSALEIARWLEGRPDVARVLHP 289 (395)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECC
Confidence 246777889999999999999987 44 34434
No 278
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.72 E-value=3.8e-15 Score=154.41 Aligned_cols=312 Identities=13% Similarity=0.126 Sum_probs=182.4
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCC-
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPH- 166 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pG- 166 (519)
.|.|.+++.+.+.... +... .|. ..++....+++++++|.+ ++.+++|++ |+.+++..+..++
T Consensus 57 ~p~v~~a~~~~~~~~~---~~~~-~~~-----~~~~~~la~~l~~~~~~~------~v~~~~gg~eA~~~al~~a~~~~~ 121 (396)
T PRK02627 57 HPKLVEAIQEQAAKLI---HTSN-LYY-----IEPQEELAEKLVELSGMD------KVFFCNSGAEANEAAIKLARKYGH 121 (396)
T ss_pred CHHHHHHHHHHHhhcc---cccc-ccC-----CHHHHHHHHHHHhhcCCC------EEEECCCcHHHHHHHHHHHHHHhc
Confidence 4789999888776421 1111 121 234444558888887764 366666655 9998888765444
Q ss_pred ------CEEEEecCCCcccccccccccCCceeeeeeeeEEEee-eeCCCCC----CCCHHHHHHHhhhhCCcEEEEcccc
Q 010058 167 ------ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY-RLDESTG----YIDYEQLEKSAALFRPKLIVAGASA 235 (519)
Q Consensus 167 ------D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~-~~d~~~~----~iD~d~l~~~i~~~k~klIi~~~sn 235 (519)
++|++.+..+.+..... +.+.+.......+ ++. ++. ..|++++++.+.+ ++++|++.+.+
T Consensus 122 ~~~~~~~~ii~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~ 192 (396)
T PRK02627 122 KKGIEKPEIITAENSFHGRTLAT-------LSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITD-KTAAVMLEPIQ 192 (396)
T ss_pred ccCCCCCeEEEECCCcCcccHHH-------HHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCC-CeEEEEEeccc
Confidence 66887775443221110 1111111000000 011 111 2289999999875 89999998443
Q ss_pred --cc-cc---ccHHHHHHHHhhcCCEEEehhhhhhhccccCCC-CC-CCC-CCeEEEEcCCCcc-cCCCcceEEeecccc
Q 010058 236 --YA-RL---YDYARIRKVCDKQKAVMLADMAHISGLVAAGVI-PS-PFE-YADVVTTTTHKSL-RGPRGAMIFFRKGVK 305 (519)
Q Consensus 236 --~g-~~---~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~~-p~~-~~di~~~S~~K~l-~GprgG~i~~~~~~~ 305 (519)
.| .. ..+++|+++|++||+++|+|+++. |+...+.. .. .++ ..|++++| |.+ +|.|.|++++++
T Consensus 193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~t~s--K~~~~G~rig~~~~~~--- 266 (396)
T PRK02627 193 GEGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIMTLA--KGLGGGVPIGAVLAKE--- 266 (396)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEEEEc--chhhCCcccEEEEEcH---
Confidence 33 22 248999999999999999999976 44322211 00 011 35777655 877 466779999987
Q ss_pred cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC--CEEecC-
Q 010058 306 EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG--YDLVSG- 382 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~- 382 (519)
++.+.+......... +.+....++..++++.+.. +++.++++++.+.+.+.|.+.. +..+..
T Consensus 267 -----------~~~~~~~~~~~~~t~-~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 331 (396)
T PRK02627 267 -----------KVADVFTPGDHGSTF-GGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEV 331 (396)
T ss_pred -----------HHHhccCCCCCCCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeee
Confidence 555544332122222 2344455555566665543 3345666666777777666541 211111
Q ss_pred CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 383 GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 383 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.....++++.+ ..+..++.+.|.+.||.+. |+. .+.+|++++...+ +++++++++.|.++++.
T Consensus 332 ~~~g~~~~i~~---~~~~~~~~~~l~~~Gv~v~----~~~-----~~~lRi~~~~~~~----~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 332 RGLGLMIGIEL---DRPAAEIVKKALEKGLLIN----VTG-----DNVLRLLPPLIIS----KEEIDEAVDRLEEVLKE 394 (396)
T ss_pred ccCcEEEEEEe---cCcHHHHHHHHHHCCeEEe----ecC-----CCEEEEECCcccC----HHHHHHHHHHHHHHHHh
Confidence 11234455555 2246677777777899996 332 3679999876666 89999999999988753
No 279
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.72 E-value=6.4e-15 Score=151.63 Aligned_cols=322 Identities=14% Similarity=0.164 Sum_probs=189.8
Q ss_pred CeeecCCC-----CCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~e-----n~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.|++..+. ...+|.|.+++.+.+.+.. ..+.. +..+++.+..+++.+.++.+. -+.+.||+
T Consensus 31 ~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~------~~~~~~~~la~~l~~~~~~~~-----~~~~~sG~ 96 (377)
T PRK02936 31 YLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIW---HVSNL------FTNSLQEEVASLLAENSAGDL-----VFFCNSGA 96 (377)
T ss_pred EEECCcchhhccCCCCCHHHHHHHHHHHHhcc---ccccc------cCCHHHHHHHHHHHhcCCCCE-----EEEeCCcH
Confidence 45665443 1347899999998887521 11111 112444445577776665432 36677888
Q ss_pred HHHHHHHHhh-cCCC-CEEEEecCCC-cccccccccccCCceeeeeeeeEEEee-eeCCCC-C--CCCHHHHHHHhhhhC
Q 010058 153 PANFQVYTAL-LKPH-ERIMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPY-RLDEST-G--YIDYEQLEKSAALFR 225 (519)
Q Consensus 153 ~a~~~~~~al-l~pG-D~Vl~~~~~~-~~~~~~~~~~~~~~v~~~g~~~~~v~~-~~d~~~-~--~iD~d~l~~~i~~~k 225 (519)
.|+.+++... .-+| ++|++.+..+ |.... +. .+.+.......+ +..++. . .-|++++++.+.+ +
T Consensus 97 ~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~ 167 (377)
T PRK02936 97 EANEAALKLARKHTGKSKIVTFEQSFHGRTFG-TM-------SATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-E 167 (377)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCCcHH-hh-------hccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-C
Confidence 8999888753 2344 6688776443 32221 11 111110000000 000000 0 1278999998876 7
Q ss_pred CcEEEEcccc--cc----ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CCC-CCeEEEEcCCCcc-cCCCc
Q 010058 226 PKLIVAGASA--YA----RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PFE-YADVVTTTTHKSL-RGPRG 295 (519)
Q Consensus 226 ~klIi~~~sn--~g----~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~~-~~di~~~S~~K~l-~Gprg 295 (519)
+++|++.+.. .| ....+++|+++|++||+++|+|++|. |+...+.... -++ ..|++++ +|++ +|.++
T Consensus 168 ~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~~~di~t~--sK~l~~G~~i 244 (377)
T PRK02936 168 VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGLDPDIVTV--AKGLGNGIPV 244 (377)
T ss_pred eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhhCCCCcEEEE--cccccCCCcc
Confidence 8898887322 23 22348999999999999999999984 5433221100 011 2477654 5887 45678
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
|++++++ ++.+.+......... +.+....++..++++.... +.+.+++.++.+++.+.|++.
T Consensus 245 g~v~~~~--------------~~~~~~~~~~~~~t~-~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~ 306 (377)
T PRK02936 245 GAMIGKK--------------ELGTAFGPGSHGSTF-GGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEE 306 (377)
T ss_pred EEEEEcH--------------HHHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 9999887 555554332222222 3455556666667776532 345567777888888887763
Q ss_pred --CCEEecC-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHH
Q 010058 376 --GYDLVSG-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVA 452 (519)
Q Consensus 376 --g~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~ 452 (519)
++..+.. .....++++.+.. +...+.+.|.+.||.+. |+ +.+.|||+++...+ ++++++++
T Consensus 307 ~~~~~~~~~v~~~g~~~~i~~~~---~~~~~~~~l~~~gv~v~----~~-----g~~~lRi~p~~~~~----~~~i~~~i 370 (377)
T PRK02936 307 LEHLECVKNIRGKGLMIGIECTE---EVAPVIEQLREEGLLVL----SA-----GPNVIRLLPPLVVT----KEELDQAV 370 (377)
T ss_pred HhhCCcEEeEeecceEEEEEecc---hHHHHHHHHHHCCeEEe----cC-----CCCEEEEECCcccC----HHHHHHHH
Confidence 3333221 1123466666643 25667888888999985 32 24689999887777 89999999
Q ss_pred HHHHHHH
Q 010058 453 EFFDAAV 459 (519)
Q Consensus 453 ~~l~~~l 459 (519)
+.|.+++
T Consensus 371 ~~l~~~~ 377 (377)
T PRK02936 371 YLLKKVL 377 (377)
T ss_pred HHHHHhC
Confidence 9998753
No 280
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.72 E-value=3.2e-15 Score=146.62 Aligned_cols=320 Identities=18% Similarity=0.156 Sum_probs=211.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH---HHHHHHHhh-cCCC----CEEEEecCCCcccccccccccCC
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP---ANFQVYTAL-LKPH----ERIMALDLPHGGHLSHGYQTDTK 189 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~---a~~~~~~al-l~pG----D~Vl~~~~~~~~~~~~~~~~~~~ 189 (519)
++..++-...++|+++..|.|. +.+|+.+|++ +-+.++.+. -..| +.||+++..||....
T Consensus 105 qG~l~li~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA-------- 172 (496)
T COG1003 105 QGYLELIYELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA-------- 172 (496)
T ss_pred HHHHHHHHHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh--------
Confidence 3455555566699999999987 6799999998 444466666 2333 579999988887743
Q ss_pred ceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-cc-ccccHHHHHHHHhhcCCEEEehhhhhhhcc
Q 010058 190 KISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YA-RLYDYARIRKVCDKQKAVMLADMAHISGLV 267 (519)
Q Consensus 190 ~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g-~~~d~~~i~~ia~~~~~~livD~ah~~g~~ 267 (519)
...+.|..+..|+ .+ ++|.+|+|+|++++.+ ++.++.++.+| .| ...++.+|++|.+++|..|..|+|..-+.+
T Consensus 173 SAam~G~~VV~V~--~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~v 248 (496)
T COG1003 173 SAAMAGFKVVVVK--CD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIV 248 (496)
T ss_pred hHhhcCceEEEEe--cC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhh
Confidence 2334565555554 44 5699999999999997 89999888555 67 567899999999999999999998654433
Q ss_pred ccCCCCCCCCCCeEEEEcCCCcccCCCc------ceEEeecccc-cccc-----cCcchhhhHHHHhhhcccCCCCCCcc
Q 010058 268 AAGVIPSPFEYADVVTTTTHKSLRGPRG------AMIFFRKGVK-EINK-----QGQEVMYAYEDKINQAVFPGLQGGPH 335 (519)
Q Consensus 268 ~~~~~~~p~~~~di~~~S~~K~l~Gprg------G~i~~~~~~~-~~~~-----~g~~~~~~~~~~i~~~~~~~~~g~~~ 335 (519)
.. ..|. --++|++-...||+++.|.| |-|.++..+. ..|. .++....+...+-.-.+....+|+..
T Consensus 249 G~-~rPG-d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~ 326 (496)
T COG1003 249 GL-ARPG-DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSAS 326 (496)
T ss_pred cc-cccc-ccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcch
Confidence 21 1111 01789999999999976665 4565555431 1121 11110000000000011111224444
Q ss_pred HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC--CcceeeeeccC----CCCcHHHHHHhhcc
Q 010058 336 NHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGT--ENHLVLVNLRN----KGIDGSRVEKVLES 409 (519)
Q Consensus 336 ~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~--~~~~~~v~~~~----~~~~~~~~~~~L~~ 409 (519)
...++- .-+..+..+++++..+...-|++++.+.|+. .+++...+. ..|-++++.++ .|++..++.+.|.+
T Consensus 327 il~~a~--~YI~~mG~~GL~~ase~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD 403 (496)
T COG1003 327 ILPIAW--AYIRMMGADGLKQASEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLD 403 (496)
T ss_pred HHHHHH--HHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHh
Confidence 444432 2344555667888888889999999999988 456544333 46778888773 47888999999999
Q ss_pred cCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 010058 410 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIK 466 (519)
Q Consensus 410 ~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~ 466 (519)
+|+..-.-+.|. ...+.+-|-...--+ .++++++++++.++.....++.
T Consensus 404 ~GfHaPT~~FPl----iV~~tLMIEPTEsEs----k~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 404 YGFHAPTMYFPL----IVAGTLMIEPTESES----KEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred cCCCCCcccCcc----ccccceeecCCCCCC----HHHHHHHHHHHHHHHHHHHhcc
Confidence 999874333332 234455555444444 7999999999999988776653
No 281
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.72 E-value=5.2e-15 Score=153.55 Aligned_cols=315 Identities=15% Similarity=0.136 Sum_probs=186.8
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+++.+.+.+.. ..+. . ...+...+++ ++++++++.+. ...++||+.||.+++....
T Consensus 57 ~~p~v~~a~~~~~~~~~---~~~~-~-~~~~~~~~l~----~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~~ 122 (403)
T PRK05093 57 CHPALVKALKEQGEKLW---HISN-V-FTNEPALRLA----KKLIDATFAER-----VFFANSGAEANEAAFKLARRYAC 122 (403)
T ss_pred CCHHHHHHHHHHHHhcC---cccC-c-cCCHHHHHHH----HHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHHh
Confidence 48899999988876521 1111 1 1122233333 77777776543 3778889889998777541
Q ss_pred ----CCCCEEEEecCC-CcccccccccccC----CceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccc
Q 010058 164 ----KPHERIMALDLP-HGGHLSHGYQTDT----KKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGAS 234 (519)
Q Consensus 164 ----~pGD~Vl~~~~~-~~~~~~~~~~~~~----~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~s 234 (519)
...++|+..+.. ||.+......... .+.......+..++ .-|++++++.+.+ ++++|+++|.
T Consensus 123 ~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~aaiiiep~ 193 (403)
T PRK05093 123 DRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP--------FNDLAAVKAVIDD-HTCAVVVEPI 193 (403)
T ss_pred hcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC--------CCCHHHHHHHhcC-CeEEEEEecc
Confidence 123456666543 4443211000000 00000000011111 1278999998875 7999999865
Q ss_pred c-cccc-----ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C-CCeEEEEcCCCcc-cCCCcceEEeecc
Q 010058 235 A-YARL-----YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E-YADVVTTTTHKSL-RGPRGAMIFFRKG 303 (519)
Q Consensus 235 n-~g~~-----~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~-~~di~~~S~~K~l-~GprgG~i~~~~~ 303 (519)
+ .|.. ..+++|+++|++||+++|+|++|. |+...+.. .+. . ..|+.++| |++ +|+|.|++++++
T Consensus 194 ~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~-~~~~~~~~~pdi~s~s--K~l~~G~rig~vv~~~- 268 (403)
T PRK05093 194 QGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDL-FAYMHYGVTPDILTSA--KALGGGFPIGAMLTTA- 268 (403)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccc-hhhhhcCCCCCEEEec--ccccCCcceEEEEEcH-
Confidence 5 4322 238999999999999999999976 55333321 111 1 25666654 776 577889999988
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCC--EEec
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY--DLVS 381 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~--~~~~ 381 (519)
++.+.+.........+ .+....++..++++.+.. .++.++++++++++.+.|++++. .++.
T Consensus 269 -------------~i~~~l~~~~~~~t~~-~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 331 (403)
T PRK05093 269 -------------EIASHFKVGTHGSTYG-GNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFS 331 (403)
T ss_pred -------------HHHhhcCCCCCCCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 5555554322222223 344445555566766533 34567888899999999988632 1211
Q ss_pred CC-CCcceeeeeccCCC-CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 382 GG-TENHLVLVNLRNKG-IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 382 ~~-~~~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.. ....+.++.+.+.. .+..++...|.+.||.+. |+ +.+.+|++++...+ ++|++++++.|.+++
T Consensus 332 ~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~----~~-----g~~~lRl~~~~~~~----~~~i~~~~~~l~~~l 398 (403)
T PRK05093 332 EIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVL----VA-----GPDVLRFAPSLVIE----EADIDEGLARFEKAV 398 (403)
T ss_pred eEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEe----cC-----CCCEEEEeCCCCCC----HHHHHHHHHHHHHHH
Confidence 11 11234455553311 134567777777899986 32 23689999887767 899999999999988
Q ss_pred H
Q 010058 460 K 460 (519)
Q Consensus 460 ~ 460 (519)
.
T Consensus 399 ~ 399 (403)
T PRK05093 399 A 399 (403)
T ss_pred H
Confidence 5
No 282
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.71 E-value=2.1e-15 Score=156.75 Aligned_cols=158 Identities=17% Similarity=0.142 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+...++| +++++++|.+. .+.++||+.|+..++.++++|||+|++.+..|++....... .+...|..
T Consensus 57 p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~----~~~~~G~~ 123 (418)
T TIGR01326 57 PTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKH----TLKRLGIE 123 (418)
T ss_pred hhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHH----HHHHcCcE
Confidence 4455666 88999999754 48888888899989999999999999998777665332210 11223444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ . -|++++++++++ ++++|+++ ++| +|...|+++|+++|+++|+++|+|+++..+.. ..|
T Consensus 124 v~~v~--~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-----~~~ 189 (418)
T TIGR01326 124 VRFVD--P------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-----CRP 189 (418)
T ss_pred EEEEC--C------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-----CCc
Confidence 44432 1 189999999987 89999988 666 78889999999999999999999999876532 123
Q ss_pred CC-CCeEEEEcCCCcccCC--CcceEEeec
Q 010058 276 FE-YADVVTTTTHKSLRGP--RGAMIFFRK 302 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gp--rgG~i~~~~ 302 (519)
+. ++|+++.|++|+++|+ +.|+++++.
T Consensus 190 l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 190 IDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hhcCCeEEEECccccccCCccceEEEEEec
Confidence 33 6899999999998653 446666644
No 283
>PRK07049 methionine gamma-lyase; Validated
Probab=99.71 E-value=3.1e-15 Score=155.45 Aligned_cols=215 Identities=17% Similarity=0.139 Sum_probs=143.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeee
Q 010058 119 YIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFF 198 (519)
Q Consensus 119 ~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 198 (519)
....+| +.++++.|.+. .+.+++|+.|+.+++.++++|||.|++.++.|+++...... .....|..+
T Consensus 84 t~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~----~l~~~Gi~~ 150 (427)
T PRK07049 84 NSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAK----TFRNFGVGA 150 (427)
T ss_pred CHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHH----HHHhcCcEE
Confidence 345666 88888998764 47888888898889999999999999999887776432110 001123322
Q ss_pred EEEeeeeCCCCCCCCHHHHHHHhh----hhCCcEEEEc-ccc-ccccccHHHHHHHHhh------cCCEEEehhhhhhhc
Q 010058 199 ETMPYRLDESTGYIDYEQLEKSAA----LFRPKLIVAG-ASA-YARLYDYARIRKVCDK------QKAVMLADMAHISGL 266 (519)
Q Consensus 199 ~~v~~~~d~~~~~iD~d~l~~~i~----~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~------~~~~livD~ah~~g~ 266 (519)
+.+. + ..|++++++.+. ..++|+|+++ ++| +|...|+++|.++|+. +++++++|++.....
T Consensus 151 --v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~ 223 (427)
T PRK07049 151 --VGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPV 223 (427)
T ss_pred --EEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccc
Confidence 2222 1 256777876664 2378999998 777 8899999999999988 899999999844322
Q ss_pred cccCCCCCCCC-CCeEEEEcCCCcccC---CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHH
Q 010058 267 VAAGVIPSPFE-YADVVTTTTHKSLRG---PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGL 342 (519)
Q Consensus 267 ~~~~~~~~p~~-~~di~~~S~~K~l~G---prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal 342 (519)
. ..|+. ++|+++.|++|+++| .|+|+++.++ ++.+.+.....+. .++.+......
T Consensus 224 ~-----~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~--------------~l~~~l~~~~~~~-g~~ls~~~a~l- 282 (427)
T PRK07049 224 F-----QKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK--------------ALIRQVRALRSAI-GTQLDPHSCWM- 282 (427)
T ss_pred c-----CCccccCCCEEEEcCceeecCCCCcEEEEEECCH--------------HHHHHHHHHHHhc-CCCCCHHHHHH-
Confidence 1 12333 589999999999875 4679999876 5555444322211 12222222222
Q ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 343 AVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 343 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
++..+. .+....++..++++.+.+.|++. ++.
T Consensus 283 --~~r~L~--tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 283 --LGRSLE--TLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred --HHcCCC--hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 222222 35666788899999999999988 543
No 284
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.71 E-value=6.1e-15 Score=153.02 Aligned_cols=318 Identities=17% Similarity=0.161 Sum_probs=188.1
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+|+.+.+.+-. +.+.. |. ++...++ .++++++++.+. .+.++||+.|+.+++....
T Consensus 56 ~~p~v~~A~~~~~~~~~---~~~~~-~~-~~~~~~l----a~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~ 121 (406)
T PRK12381 56 AHPALREALNEQASKFW---HTGNG-YT-NEPVLRL----AKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAH 121 (406)
T ss_pred CCHHHHHHHHHHHhhcc---cccCc-cC-CHHHHHH----HHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHh
Confidence 37888888888876421 11111 11 1222233 377777776542 3666788889988777641
Q ss_pred ----CCCCEEEEecCCCcccccccccccCCceeeeeee-eE--EEeeeeC-CCCCCCCHHHHHHHhhhhCCcEEEEcccc
Q 010058 164 ----KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF-FE--TMPYRLD-ESTGYIDYEQLEKSAALFRPKLIVAGASA 235 (519)
Q Consensus 164 ----~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~-~~--~v~~~~d-~~~~~iD~d~l~~~i~~~k~klIi~~~sn 235 (519)
.+..+|+..+..+-|.... .+.+.+.. +. ..++..+ ......|++++++.+.+ ++++|++.|.+
T Consensus 122 ~~~~~~r~~ii~~~~~yHG~t~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiEPv~ 193 (406)
T PRK12381 122 DRYGSHKSGIVAFKNAFHGRTLF-------TVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVEPIQ 193 (406)
T ss_pred hcCCCCCCeEEEECCCcCCcchh-------HHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEeCCc
Confidence 2456788776443222110 11111110 00 0000000 00012478999998876 88899988555
Q ss_pred -cc-----ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C-CCeEEEEcCCCcc-cCCCcceEEeeccc
Q 010058 236 -YA-----RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E-YADVVTTTTHKSL-RGPRGAMIFFRKGV 304 (519)
Q Consensus 236 -~g-----~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~-~~di~~~S~~K~l-~GprgG~i~~~~~~ 304 (519)
.| ....+++|+++|++||+++|+|++| .|+...+.. .+. . ..|++++ .|+| +|.+.|++++++
T Consensus 194 ~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~-~~~~~~~v~pDi~t~--sK~l~gG~~ig~~~~~~-- 267 (406)
T PRK12381 194 GEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGEL-YAYMHYGVTPDVLTT--AKALGGGFPIGAMLTTE-- 267 (406)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcch-hhhHhhCCCCCEEEe--hhhhhCCCceEEEEEcH--
Confidence 33 2445899999999999999999998 555333321 111 1 3577655 5988 566779998887
Q ss_pred ccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC--CEEecC
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG--YDLVSG 382 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~ 382 (519)
++.+.+......... +.+....++..++++.+.. .+..+++.++.+++.+.|++++ +.++..
T Consensus 268 ------------~~~~~~~~~~~~~t~-~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~ 331 (406)
T PRK12381 268 ------------KCASVMTVGTHGTTY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSE 331 (406)
T ss_pred ------------HHHhhcCCCCCCCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEE
Confidence 555554432222222 2344445555566666543 3467888888999999888763 322221
Q ss_pred CC-CcceeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 383 GT-ENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 383 ~~-~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.. ...+..+.+... ......+.+.|.+.||.+. +. .++.||++++...+ ++|++++++.|.+++.
T Consensus 332 vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~----~~-----g~~~lRl~p~~~~t----~~~i~~~~~~l~~~l~ 398 (406)
T PRK12381 332 IRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVL----IA-----GPNVVRFAPALNIS----EEEITTGLDRFARACE 398 (406)
T ss_pred EecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEe----eC-----CCCEEEEeCCccCC----HHHHHHHHHHHHHHHH
Confidence 11 123344444321 1124567788888999985 21 23589999988777 8999999999999886
Q ss_pred HH
Q 010058 461 LA 462 (519)
Q Consensus 461 ~~ 462 (519)
..
T Consensus 399 ~~ 400 (406)
T PRK12381 399 RF 400 (406)
T ss_pred HH
Confidence 43
No 285
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.70 E-value=9.1e-16 Score=171.29 Aligned_cols=296 Identities=13% Similarity=0.065 Sum_probs=191.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-cCCC--CEEEEecCCCcccccccccccCCceeee
Q 010058 119 YIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-LKPH--ERIMALDLPHGGHLSHGYQTDTKKISAV 194 (519)
Q Consensus 119 ~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-l~pG--D~Vl~~~~~~~~~~~~~~~~~~~~v~~~ 194 (519)
+.-+.-...+..++++.|++. +|+.+..+++ +..++++++ +++| |+|++++..|++....+... ....
T Consensus 118 G~Leal~~~Qt~la~LtG~~~----anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~----a~~~ 189 (954)
T PRK05367 118 GRLEALLNFQTMVADLTGLEI----ANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTR----AEPL 189 (954)
T ss_pred HHHHHHHHHHHHHHHHHCCCh----hhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHH----HHhC
Confidence 333333456789999999998 4688888887 555677776 5664 99999998888876543211 1123
Q ss_pred eeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 195 SIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 195 g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
|..++.++. +. |.+ .+ ++..+++. ++.+|...|+++|.++|+++|+++++|..+.+.........
T Consensus 190 G~ev~~~~~--~~-----d~~------~~-~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge 255 (954)
T PRK05367 190 GIEVVVGDA--AK-----ALD------HD-DVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGE 255 (954)
T ss_pred CCEEEEecC--cc-----CCC------cc-cEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhh
Confidence 544555543 21 111 11 44455555 55599999999999999999999999997754433332222
Q ss_pred CCCCCCeEEEEcCCCc-----ccCCCcceEEeeccc-cccc--ccCcc------hhhhHHHHhhhcccCCCCCCccHHH-
Q 010058 274 SPFEYADVVTTTTHKS-----LRGPRGAMIFFRKGV-KEIN--KQGQE------VMYAYEDKINQAVFPGLQGGPHNHT- 338 (519)
Q Consensus 274 ~p~~~~di~~~S~~K~-----l~GprgG~i~~~~~~-~~~~--~~g~~------~~~~~~~~i~~~~~~~~~g~~~~~~- 338 (519)
. ++||+++++||| ++||..|++.++++. +..| ..|-. ..+.+.-.-.........++.+.-.
T Consensus 256 ~---GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~ 332 (954)
T PRK05367 256 M---GADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTA 332 (954)
T ss_pred c---CCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchH
Confidence 2 899999999998 678866999999864 2222 22211 1111100000000000124444332
Q ss_pred --HHHHHHH--HHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEE
Q 010058 339 --ISGLAVA--LKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAA 414 (519)
Q Consensus 339 --iaal~~a--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v 414 (519)
+.++.++ +.++...+++++.+++..++.++++.|.+.|+++..+. ++-.+.+.. +.+..++.+.|.++||.+
T Consensus 333 qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~---~f~~~~~~~-~~~~~~i~~~l~~~gi~~ 408 (954)
T PRK05367 333 QVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDS---FFDTLTVEV-GGDAAAVLARALAAGINL 408 (954)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCC---CCCeEEEeC-CCCHHHHHHHHHHCCcee
Confidence 2222222 24456678999999999999999999988898876532 222232222 236788999999999998
Q ss_pred cccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 415 NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 415 ~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
+. ...+.+|++++.++| ++|++++++.|.
T Consensus 409 ~~---------~~~~~l~is~~e~~t----~~did~l~~~l~ 437 (954)
T PRK05367 409 RR---------VDDDHVGISLDETTT----REDLAALLAVFG 437 (954)
T ss_pred cc---------ccCCEEEEEecccCC----HHHHHHHHHHHc
Confidence 52 114579999999999 999999999997
No 286
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.70 E-value=2.6e-15 Score=137.56 Aligned_cols=316 Identities=16% Similarity=0.196 Sum_probs=199.3
Q ss_pred hcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 74 RQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 74 ~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
-.++.++|.+.|++ ++|+.++ -+| .||..|. ..+. ..++.--++.++ |+.++.|
T Consensus 39 ~G~~iv~ld~~e~~ryPdP~q~e-------fk~--~~~d~rn-------k~ls----~a~~~dkpLt~d----nic~GvG 94 (375)
T KOG0633|consen 39 LGRDIVKLDANENPRYPDPEQME-------FKY--VYPDPRN-------KRLS----DALAQDKPLTSD----NICVGVG 94 (375)
T ss_pred cCCCceEeccccCCCCcCHHHcc-------ccc--ccCCccc-------chhh----hhcccCCCCCcc----ceEEecC
Confidence 34567888888884 5555433 233 2332211 0111 222233456664 7999999
Q ss_pred HH-HHHHHHHhhcCCC-CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-CCcE
Q 010058 152 SP-ANFQVYTALLKPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-RPKL 228 (519)
Q Consensus 152 s~-a~~~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-k~kl 228 (519)
+. .+.+++++.+.|| ++|+...++++.+.- ...+.+..+..+| .++ ++.+|.|++.+.++.. ++|+
T Consensus 95 sDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v--------~A~iNd~eVvkvp--l~p-dF~lnvdai~evl~~ds~iK~ 163 (375)
T KOG0633|consen 95 SDELIDLIIRCVCDPGKEKILDCPPTYSMYVV--------DAAINDAEVVKVP--LNP-DFSLNVDAIAEVLELDSKIKC 163 (375)
T ss_pred cHHHHHHHHhheecCCccceeecCCcceeEEE--------EeecCCceEEEec--CCC-CccccHHHHHHHHhccccceE
Confidence 98 7887999999999 899988866654422 1223344444554 453 5999999999988754 7999
Q ss_pred EEEc-ccc-ccccccHHHHHHHHhhc-CCEEEehhhhh--hhcc-ccCCCCCCCCCCe-EEEEcCCC--cccCCCcceEE
Q 010058 229 IVAG-ASA-YARLYDYARIRKVCDKQ-KAVMLADMAHI--SGLV-AAGVIPSPFEYAD-VVTTTTHK--SLRGPRGAMIF 299 (519)
Q Consensus 229 Ii~~-~sn-~g~~~d~~~i~~ia~~~-~~~livD~ah~--~g~~-~~~~~~~p~~~~d-i~~~S~~K--~l~GprgG~i~ 299 (519)
++++ |.| +|..+..+.|.+|.+-- +.++++|+|++ +|.. ...+.. .|.. ++.-+.+| +|+|.|.||-+
T Consensus 164 ~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~---kYpNLivlqTlSKsfGLAGiRvG~~~ 240 (375)
T KOG0633|consen 164 IFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVK---KYPNLIVLQTLSKSFGLAGIRVGYGA 240 (375)
T ss_pred EEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhH---hCCceeehhhhhhhcCcceeEeeccc
Confidence 9998 666 78888888888877643 78999999954 2311 011100 1323 33334445 57899999999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc---CHhHHHHHHHHHHHHHHHHHHHHhc-
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK---TPEYKAYQEQVLSNSSKFARSLLER- 375 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~- 375 (519)
++. .+++.+++...|...+ .++-.+||+.+. -...+.++..+.+.+.+|.+.|.+.
T Consensus 241 ~~~--------------~ia~iln~~KaPYNiS------~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~ 300 (375)
T KOG0633|consen 241 FPL--------------SIAEILNRAKAPYNIS------VAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVP 300 (375)
T ss_pred ccH--------------HHHHHHHhccCCcccc------chhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 988 6777777776665322 122222333332 2235778888889999999999987
Q ss_pred CCEEecCCCCcceeeeeccCC--CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 376 GYDLVSGGTENHLVLVNLRNK--GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
++.-+.++.++++.++.+... +.......+.+.+.|+.++- -|. .+.-.+++||+.+. +|+-..+.+
T Consensus 301 ~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRf---rgs-e~~c~G~lRitvGt-------~EentvL~k 369 (375)
T KOG0633|consen 301 FLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRF---RGS-EEGCKGYLRITVGT-------PEENTVLMK 369 (375)
T ss_pred cccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEE---cCC-ccccceeEEEEcCC-------cccchHHHH
Confidence 555455677888888877532 23333345566779999983 222 22235789998652 567777777
Q ss_pred HHHHH
Q 010058 454 FFDAA 458 (519)
Q Consensus 454 ~l~~~ 458 (519)
.|++.
T Consensus 370 ~~K~~ 374 (375)
T KOG0633|consen 370 CLKQF 374 (375)
T ss_pred HHHhh
Confidence 77653
No 287
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.67 E-value=6.2e-15 Score=150.05 Aligned_cols=215 Identities=22% Similarity=0.231 Sum_probs=141.3
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
+++....+| ++++++.|.+. .+.+.||..|+.+++.+++++||+|++++..|++........ ..-.|
T Consensus 53 gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~----l~~~g 119 (386)
T PF01053_consen 53 GNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEEL----LPRFG 119 (386)
T ss_dssp C-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHC----HHHTT
T ss_pred ccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhh----hcccC
Confidence 456677777 88888998864 488899999998899999999999999987776654322210 00113
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcC-CEEEehhhhhhhccccCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQK-AVMLADMAHISGLVAAGVI 272 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~-~~livD~ah~~g~~~~~~~ 272 (519)
..+..+ | .-|++++++++++ ++++|++. ++| +....|+++|+++|+++| +++++|.+-+.+. .
T Consensus 120 v~v~~~----d----~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~-----~ 185 (386)
T PF01053_consen 120 VEVTFV----D----PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPY-----N 185 (386)
T ss_dssp SEEEEE----S----TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTT-----T
T ss_pred cEEEEe----C----chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccccee-----e
Confidence 222222 2 2489999999998 99999998 777 668999999999999998 9999999855442 2
Q ss_pred CCCCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHH
Q 010058 273 PSPFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ 348 (519)
Q Consensus 273 ~~p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~ 348 (519)
..|+. ++|+++.|.+|.+.|.. +|.++++... ++.+++..... ..|. ......+. ..++-
T Consensus 186 ~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~------------~~~~~l~~~~~--~~G~-~~~p~da~-ll~rg 249 (386)
T PF01053_consen 186 QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS------------ELYDRLREFRR--LLGA-TLSPFDAW-LLLRG 249 (386)
T ss_dssp C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH------------HHHHHHHHHHH--HHT--B--HHHHH-HHHHH
T ss_pred eccCcCCceEEEeeccccccCCcceeeEEEEECchh------------hhhhhhcchhh--hcCc-cchHHHHH-HHhcC
Confidence 23444 69999999999998876 3888877621 33333322110 0122 11112221 12233
Q ss_pred hcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 349 VKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
+. .+....++..+|+..+++.|++.
T Consensus 250 l~--Tl~~R~~~~~~nA~~lA~~L~~h 274 (386)
T PF01053_consen 250 LR--TLPLRMERQNENAEALAEFLEEH 274 (386)
T ss_dssp HT--THHHHHHHHHHHHHHHHHHHHTS
T ss_pred CC--cHHHHHHHHHHHHHHHHHHHHhC
Confidence 32 36777899999999999999998
No 288
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.67 E-value=1.2e-15 Score=138.08 Aligned_cols=162 Identities=24% Similarity=0.258 Sum_probs=114.0
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCcH-HHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeee
Q 010058 127 CQKRALDAFQLDPAKWGVNVQSLSGS-PANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 205 (519)
Q Consensus 127 ~~~~~~~~~g~~~~~~~~~V~~~sGs-~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~ 205 (519)
++++++++|+.+.+ ++.+++|+ .|+..++.++.++|++|++.+..|.++.. . .....|..+..++ .
T Consensus 5 ~~~~l~~~~~~~~~----~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~~~~~v~--~ 71 (170)
T cd01494 5 LEEKLARLLQPGND----KAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGAKPVPVP--V 71 (170)
T ss_pred HHHHHHHHcCCCCC----cEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCCEEEEec--c
Confidence 44888999965443 25555455 49998999999999999999988877752 1 1223354444444 3
Q ss_pred CCCC-CCCCHHHHHHHhhhhCCcEEEEcccc--ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEE
Q 010058 206 DEST-GYIDYEQLEKSAALFRPKLIVAGASA--YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVV 282 (519)
Q Consensus 206 d~~~-~~iD~d~l~~~i~~~k~klIi~~~sn--~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~ 282 (519)
+..+ ...|.+.+++.....+|+++++++++ .|...|+++|+++|+++|+++++|++|..+.........+..++|++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~ 151 (170)
T cd01494 72 DDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVV 151 (170)
T ss_pred CCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEE
Confidence 3222 22333356555544588999888443 56778899999999999999999999887766542211222379999
Q ss_pred EEcCCCcccCCCcceEEee
Q 010058 283 TTTTHKSLRGPRGAMIFFR 301 (519)
Q Consensus 283 ~~S~~K~l~GprgG~i~~~ 301 (519)
+.|+||+++++++|+++++
T Consensus 152 ~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 152 TFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEEcccccCCCceEEEEeC
Confidence 9999999999888999874
No 289
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.66 E-value=1.4e-16 Score=156.12 Aligned_cols=251 Identities=20% Similarity=0.230 Sum_probs=160.9
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL 163 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all 163 (519)
|+| +.|++++++.+... |. .-|+..++..+++ ++++++||.+. .+.+.+|+.||..++++++
T Consensus 4 SD~-~~~~m~~a~~~a~~-----gd---~~Yg~D~~~~~l~----~~i~~l~g~e~-----a~f~~sGT~An~~al~~~~ 65 (290)
T PF01212_consen 4 SDT-PTPAMLEAMAAANV-----GD---DAYGEDPTTARLE----ERIAELFGKEA-----ALFVPSGTMANQLALRAHL 65 (290)
T ss_dssp -SS-S-HHEEHHHHHTTS-----B----CCTTSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHHH
T ss_pred ccC-CCHHHHHHHHcccc-----CC---cccCCChhHHHHH----HHHHHHcCCCE-----EEEeCCCChHHHHHHHHHH
Confidence 555 78899999955432 22 2367778888888 88889999885 3788899999999999999
Q ss_pred CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-----hCCcEEEEc-cccc-
Q 010058 164 KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL-----FRPKLIVAG-ASAY- 236 (519)
Q Consensus 164 ~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~-----~k~klIi~~-~sn~- 236 (519)
+|++.|++.+..|......+. ...+.|.....++ .+ +++.+|+++|++.+.. .+|++|.+. +++.
T Consensus 66 ~~~~~vi~~~~aHi~~~E~ga-----~~~~~G~~~~~l~--~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~ 137 (290)
T PF01212_consen 66 RPGESVICADTAHIHFDETGA-----IEELSGAKLIPLP--SD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELA 137 (290)
T ss_dssp HTTEEEEEETTEHHHHSSTTH-----HHHHTTCEEEEEB--EC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTT
T ss_pred hcCCceeccccceeeeeccch-----hhHhcCcEEEECC--Cc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCC
Confidence 999999988754332222222 1133455444443 22 2389999999999987 457899888 6666
Q ss_pred -ccccc---HHHHHHHHhhcCCEEEehhhhhh------hccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeeccccc
Q 010058 237 -ARLYD---YARIRKVCDKQKAVMLADMAHIS------GLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE 306 (519)
Q Consensus 237 -g~~~d---~~~i~~ia~~~~~~livD~ah~~------g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~ 306 (519)
|.+++ +++|.++|++||+.|+.|+|... +....++. .++|++++|.+|.+..|-|++++++++.
T Consensus 138 GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~----~~~D~v~~~~tK~~g~~~Gavl~~~~~~-- 211 (290)
T PF01212_consen 138 GGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA----AGADSVSFGGTKNGGAPGGAVLAGNKEF-- 211 (290)
T ss_dssp TSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH----TTSSEEEEETTSTT-SSSEEEEEESHHH--
T ss_pred CCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh----hhCCEEEEEEEcccccccceEEEechHH--
Confidence 76665 56677889999999999998543 22222222 2799999999999999989999999841
Q ss_pred ccccCcchhhhHHHHhhh-cccCCCCCCccHH-HHHH----HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEe
Q 010058 307 INKQGQEVMYAYEDKINQ-AVFPGLQGGPHNH-TISG----LAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLV 380 (519)
Q Consensus 307 ~~~~g~~~~~~~~~~i~~-~~~~~~~g~~~~~-~iaa----l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 380 (519)
+.+.... ..+. |..... .+++ ...++..+. .+.....+..++++.|.+.|...|+.+.
T Consensus 212 -----------i~~~~~~~k~~g---g~~~~~G~~~a~~~~~~~~l~~l~--~~~~~~~~~~~~A~~La~~l~~~~~~~~ 275 (290)
T PF01212_consen 212 -----------IAKARRQRKRLG---GGMRQAGVLAAAELYQFAALRALE--LWLERARHANAMAKRLAAGLEALGGVLP 275 (290)
T ss_dssp -----------HHHHHHHHHHHT---HHHHHTTHHHHHHHHHHHHHCHEE--CSHHHHHCHHHHHHCHHHCHHEECEEEE
T ss_pred -----------HHHHHHHHHHhc---cCeeecceeeeechhhHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 1111100 0010 000101 1122 112332222 2355667778889999999999988766
Q ss_pred cC
Q 010058 381 SG 382 (519)
Q Consensus 381 ~~ 382 (519)
.+
T Consensus 276 ~~ 277 (290)
T PF01212_consen 276 RP 277 (290)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 290
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.66 E-value=7.5e-14 Score=145.88 Aligned_cols=331 Identities=13% Similarity=0.090 Sum_probs=181.4
Q ss_pred ccCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 010058 76 WKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s 150 (519)
+..|++..+-. ..+|.|.+|+.+.+.+.. .|+...+...++. +++++.+... +. .+..+|
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-------~~~~~~~~~~~la----e~l~~~~~~~-~~---v~~~~s 112 (423)
T TIGR00713 48 NEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT-------SYGAPTEAEILLA----KEIISRVPSV-EM---VRFVNS 112 (423)
T ss_pred CEEEEccccccccccCCCCHHHHHHHHHHHHhCC-------cCCCCCHHHHHHH----HHHHHhCCcc-cE---EEEeCC
Confidence 34566665432 458999999999887621 1222223333333 6666666532 22 244455
Q ss_pred cHHHHHHHHHhh--cCCCCEEEEecCCCccccc-ccccccC--Ccee---eeee--e--eEEEeeeeCCCCCCCCHHHHH
Q 010058 151 GSPANFQVYTAL--LKPHERIMALDLPHGGHLS-HGYQTDT--KKIS---AVSI--F--FETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 151 Gs~a~~~~~~al--l~pGD~Vl~~~~~~~~~~~-~~~~~~~--~~v~---~~g~--~--~~~v~~~~d~~~~~iD~d~l~ 218 (519)
|+.|+.+++... ....++|+.++..+-++.. ....... .... ..+. . ...+.++ ..|+++++
T Consensus 113 GseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~ 186 (423)
T TIGR00713 113 GTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLP------YNDLEALE 186 (423)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeC------CCCHHHHH
Confidence 566888777753 3356899988765544311 0000000 0000 0000 0 0001111 12789999
Q ss_pred HHhhh--hCCcEEEEc--ccccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCCCC-CCeEEEEcCCC
Q 010058 219 KSAAL--FRPKLIVAG--ASAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSPFE-YADVVTTTTHK 288 (519)
Q Consensus 219 ~~i~~--~k~klIi~~--~sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p~~-~~di~~~S~~K 288 (519)
+.+.+ .++++|++. ++|.|...+ +++|+++|++||+++|+|++|. |+..... ...-+. ..|+++ ++|
T Consensus 187 ~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~r~g~~~~~~~~~~~pDi~t--~sK 263 (423)
T TIGR00713 187 EVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT-GFRVALGGAQEYFGVEPDLTT--LGK 263 (423)
T ss_pred HHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-ccccCcchhHHHhCCCcchhh--hhh
Confidence 98873 267788885 555665444 7899999999999999999974 4421100 000011 247665 568
Q ss_pred ccc-CCCcceEEeecccccccccCcchhhhHHHHhhhc--ccCCCCCCccHHHHHHHHHHHHHhcCHhH-HHHHHHHHHH
Q 010058 289 SLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--VFPGLQGGPHNHTISGLAVALKQVKTPEY-KAYQEQVLSN 364 (519)
Q Consensus 289 ~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~g~~~~~~iaal~~al~~~~~~~~-~~~~~~~~~~ 364 (519)
+++ |++.|++++++ ++.+.+... .+.+...+.+....++..++++.+.+..+ +...+.....
T Consensus 264 ~l~~G~pig~v~~~~--------------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~ 329 (423)
T TIGR00713 264 IIGGGLPVGAFGGRR--------------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRL 329 (423)
T ss_pred hhcCCCceeeeeEHH--------------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 874 67889999988 566655421 11111223344455555567776655433 4445555555
Q ss_pred HHHHHHHHHhcCCEEecCCCCcceeeeeccCCC---------CcH---HHHHHhhcccCeEEcccccCCCCCCCCCCeEE
Q 010058 365 SSKFARSLLERGYDLVSGGTENHLVLVNLRNKG---------IDG---SRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432 (519)
Q Consensus 365 ~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~---------~~~---~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 432 (519)
++.|.+.+.+.++.....+.. .++.+.+.... .+. ..+.+.|.+.||.+. ++. .+.+|
T Consensus 330 ~~~l~~~~~~~~~~~~v~~~g-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~-----~~~~~ 399 (423)
T TIGR00713 330 AEGLSEVLEDTGIPHTVNRVG-SMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLP----PSQ-----FEACF 399 (423)
T ss_pred HHHHHHHHHhcCCCeEEEeec-cEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEe----cCC-----cccee
Confidence 556666666666544221121 22232222111 111 245666767999985 211 13478
Q ss_pred eccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++++ .+ ++|++++++.|.+++.
T Consensus 400 l~~~--~t----~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 400 LSAA--HT----EEDIENTIEAAEEVFA 421 (423)
T ss_pred eECC--CC----HHHHHHHHHHHHHHHh
Confidence 8754 34 7999999999998875
No 291
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.66 E-value=3.9e-14 Score=142.46 Aligned_cols=223 Identities=19% Similarity=0.149 Sum_probs=150.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
+++..+.+| +.++++-|.+. .+.+.||..|+..++.+++++||+|+..+..||+.......... -.|
T Consensus 61 ~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~----~~g 127 (396)
T COG0626 61 GNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQ----KFG 127 (396)
T ss_pred CCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHH----hcC
Confidence 356677788 77888888775 49999999999989999999999999998777776543322111 123
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+..+ | .-|.+++++++.+.+||+|++. |+| +-...|+++|+++|+++|+++++|.+-+. ++..
T Consensus 128 i~~~~~----d----~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfat-----P~~q 194 (396)
T COG0626 128 VEVTFV----D----PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFAT-----PVLQ 194 (396)
T ss_pred eEEEEE----C----CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccc-----cccc
Confidence 333222 2 1245566666664489999999 777 66999999999999999999999998443 3344
Q ss_pred CCCC-CCeEEEEcCCCcccCCCc---ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh
Q 010058 274 SPFE-YADVVTTTTHKSLRGPRG---AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV 349 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~l~Gprg---G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~ 349 (519)
.|++ ++||++.|.+|.+.|... |+++++++ .+.+.+...... ..|.... ..-| ...++-+
T Consensus 195 ~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~-------------~~~~~~~~~~~~-~~G~~l~-p~dA-~l~lRGl 258 (396)
T COG0626 195 RPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE-------------ELYELLFFAQRA-NTGAVLS-PFDA-WLLLRGL 258 (396)
T ss_pred ChhhcCCCEEEEeccccccCCcceeeeEEecChH-------------HHHHHHHHHHHh-hcCCCCC-HHHH-HHHHhcc
Confidence 4555 699999999999988654 77776664 344433111111 0111111 1111 2233333
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHHhc-CCE-EecC
Q 010058 350 KTPEYKAYQEQVLSNSSKFARSLLER-GYD-LVSG 382 (519)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~ 382 (519)
. .+....++..+|+..+++.|.+. .+. +..|
T Consensus 259 k--TL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yP 291 (396)
T COG0626 259 R--TLALRMERHNENALKIAEFLADHPKVKKVYYP 291 (396)
T ss_pred c--hHHHHHHHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 2 36677889999999999999997 443 3334
No 292
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.65 E-value=3.3e-14 Score=144.90 Aligned_cols=255 Identities=19% Similarity=0.181 Sum_probs=159.6
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCC-C---cceEEeCCcHHHHHHHHHhhcC--------CC-----C-EEEEecCCC
Q 010058 115 GGNEYIDMAESLCQKRALDAFQLDPAK-W---GVNVQSLSGSPANFQVYTALLK--------PH-----E-RIMALDLPH 176 (519)
Q Consensus 115 ~~~~~~~~le~~~~~~~~~~~g~~~~~-~---~~~V~~~sGs~a~~~~~~all~--------pG-----D-~Vl~~~~~~ 176 (519)
.......++|+.+.+++++++|.+.+. + +..++.+.|+.+|+.++.+.-+ .| . .|++.+..|
T Consensus 72 ~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH 151 (373)
T PF00282_consen 72 EASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAH 151 (373)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-
T ss_pred ccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccc
Confidence 344678899999999999999997221 0 1334444444488766654311 12 2 344555445
Q ss_pred cccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--C---CcEEEEc--cccccccccHHHHHHHH
Q 010058 177 GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--R---PKLIVAG--ASAYARLYDYARIRKVC 249 (519)
Q Consensus 177 ~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k---~klIi~~--~sn~g~~~d~~~i~~ia 249 (519)
.+... ...+.|...+.|+ .| +++.+|+++|++++.+. + |-+|+.+ .+++|...|+++|+++|
T Consensus 152 ~S~~K--------aa~~lGlg~~~I~--~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~ 220 (373)
T PF00282_consen 152 YSIEK--------AARILGLGVRKIP--TD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADIC 220 (373)
T ss_dssp THHHH--------HHHHTTSEEEEE---BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHH
T ss_pred cHHHH--------hcceeeeEEEEec--CC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhc
Confidence 44322 4455666666665 45 36899999999987642 2 3345554 44489999999999999
Q ss_pred hhcCCEEEehhhhhhhccccC-CC--CCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-c-cCcchhh----hHH
Q 010058 250 DKQKAVMLADMAHISGLVAAG-VI--PSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-K-QGQEVMY----AYE 319 (519)
Q Consensus 250 ~~~~~~livD~ah~~g~~~~~-~~--~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~-~g~~~~~----~~~ 319 (519)
+++++|++||+|+........ .. ...++.+|-++.+.||++..|.+ |++++++...+.. . ....... +..
T Consensus 221 ~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~ 300 (373)
T PF00282_consen 221 EKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESD 300 (373)
T ss_dssp HHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-
T ss_pred cccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccc
Confidence 999999999998654232221 11 12334799999999999998888 8999988532111 0 0000000 000
Q ss_pred HHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecC
Q 010058 320 DKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSG 382 (519)
Q Consensus 320 ~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 382 (519)
...+ ....+.+++. -.....+...++.....++.+.+++..+++++|.+.|++. +++++.+
T Consensus 301 ~~~~-~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~ 362 (373)
T PF00282_consen 301 ESYD-YGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNE 362 (373)
T ss_dssp GGGC-EEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST
T ss_pred cccc-cccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 0000 1112334555 4455667778888888899999999999999999999998 6888764
No 293
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=5.2e-13 Score=124.95 Aligned_cols=340 Identities=15% Similarity=0.162 Sum_probs=198.5
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCC-CCC-CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEG-YPG-ARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g-~p~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
..|.|..+.+..-|++.+.....+..-.++| +.. -..|.+.++.+.+-++..+.+.+.+|++-.. .||..|+|++
T Consensus 31 g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQs 108 (417)
T COG3977 31 GAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQS 108 (417)
T ss_pred CceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCccc
Confidence 4577777666566777777766655544444 111 1236777888888888889999999997543 4899999998
Q ss_pred HHHHHHHhh---cCCCCE--EEE-ecCCCcccccccccccCCceeeeeeeeEEE-e-eeeCCCC---CCCCHHHHHHHhh
Q 010058 154 ANFQVYTAL---LKPHER--IMA-LDLPHGGHLSHGYQTDTKKISAVSIFFETM-P-YRLDEST---GYIDYEQLEKSAA 222 (519)
Q Consensus 154 a~~~~~~al---l~pGD~--Vl~-~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v-~-~~~d~~~---~~iD~d~l~~~i~ 222 (519)
+.+.++.-+ ...|+. |+. +.+++-|+-..+ +.+-.+... | +++++.+ ..+|++++. +.
T Consensus 109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~---------l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~ 177 (417)
T COG3977 109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAG---------LEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IG 177 (417)
T ss_pred hHHHHHHHhcCccCCCcceeEeeccChhhccccccc---------cCccceeeccCCcccccccceeeccCHHHcc--cc
Confidence 776555544 234543 433 244444432211 111111111 0 1122221 367888876 33
Q ss_pred hhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhh---hccccCCCCCCCCCCeEEEEcCCC-cccCC
Q 010058 223 LFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHIS---GLVAAGVIPSPFEYADVVTTTTHK-SLRGP 293 (519)
Q Consensus 223 ~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~---g~~~~~~~~~p~~~~di~~~S~~K-~l~Gp 293 (519)
+ .+.+|+++ |+| +|.+.. +.++.++|++||+.++.|.|+.. +.+..+..+. +..--+.++|.+| .|+|-
T Consensus 178 e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~-w~~NiilC~SLSK~GLPG~ 255 (417)
T COG3977 178 E-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPL-WNENIILCMSLSKLGLPGS 255 (417)
T ss_pred c-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccccc-CCCCEEEEeehhhcCCCCc
Confidence 4 78899888 888 886654 55667789999999999998643 3333333321 1123477899999 47888
Q ss_pred CcceEEeecccccccccCcchhhhHHHHhhhc-----ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHH---------
Q 010058 294 RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-----VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE--------- 359 (519)
Q Consensus 294 rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-----~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~--------- 359 (519)
|.|+++.++ .+.+.+.+. ..|+..| +.++ .+.+...+..++.+
T Consensus 256 R~GIiIane--------------~viqaitnmn~iisLap~~~G----~Aia-----~~mie~gdl~rlseqVIrPFY~~ 312 (417)
T COG3977 256 RCGIIIANE--------------KVIQAITNMNGIISLAPGRMG----PAIA-----AEMIESGDLLRLSEQVIRPFYRN 312 (417)
T ss_pred ceeEEEccH--------------HHHHHHHhccceeeecCCCcc----HHHH-----HHHhhcchHHHHHHHhhhHHHHH
Confidence 889999998 444443221 1122211 1111 12222222333333
Q ss_pred HHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEccc--ccCCCC--CCCCCCeEEecc
Q 010058 360 QVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKN--TVPGDV--SAMVPGGIRMGT 435 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~--~~p~~~--~~~~~~~iRi~~ 435 (519)
+++.....|...|-+.-+.+..+ ...-+.|+-+....++..++.+.|++.|+.+-+. +.||-. .|....++|++.
T Consensus 313 ~~q~~~~~l~~~lp~~~~~iHkp-EGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~ 391 (417)
T COG3977 313 RVQTTIAILRRYLPEYRCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNY 391 (417)
T ss_pred HHHHHHHHHHHhcCccceeeecC-CcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEec
Confidence 33333334444444334444333 3344555556666788999999999999998531 233333 344566899985
Q ss_pred CccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.. + ++.++.-+.+|.+.++.
T Consensus 392 ~~--~----~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 392 VP--E----PEKIEKGVAILAEEVER 411 (417)
T ss_pred CC--C----HHHHHHHHHHHHHHHHH
Confidence 32 2 56777777777666653
No 294
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.63 E-value=2.1e-13 Score=140.23 Aligned_cols=312 Identities=14% Similarity=0.163 Sum_probs=172.6
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKPH 166 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~pG 166 (519)
.|.|++|+.+.+.... .++.. ....++ +.+++.++..++. ..+.+.||+.||.+++... ...+
T Consensus 46 ~p~v~~a~~~~~~~~~--~~~~~-------~~~~~~----~~la~~l~~~~~~--~~~~~~SGseA~~~Al~~ar~~~~~ 110 (375)
T PRK04260 46 HPQVQQALQKQAGLIW--HSPNL-------YLNSLQ----EEVAQKLIGDKDY--LAFFCNSGAEANEAAIKIARKATGK 110 (375)
T ss_pred CHHHHHHHHHHHHhcC--cccCc-------cCCHHH----HHHHHHHhcCcCC--EEEEcCccHHHHHHHHHHHHHhcCC
Confidence 6789999988876521 22211 112233 3333333222221 2245677777888777765 3456
Q ss_pred CEEEEecCC-CcccccccccccCCcee-eeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc--cccccc-
Q 010058 167 ERIMALDLP-HGGHLSHGYQTDTKKIS-AVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA--YARLYD- 241 (519)
Q Consensus 167 D~Vl~~~~~-~~~~~~~~~~~~~~~v~-~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn--~g~~~d- 241 (519)
++|++.+.. ||............... ..+..+..+++. ...|++.+++.+.+ ++.+|++.+.+ .|...+
T Consensus 111 ~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~~~~ 184 (375)
T PRK04260 111 QEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA-----IFNDLNSVKALVNK-NTAAVMLELVQGESGVLPAD 184 (375)
T ss_pred CeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe-----CCCCHHHHHHhcCC-CeEEEEECCeECCCCCcCCC
Confidence 788887654 33332211100000000 000000001110 12488999988865 77888887333 454433
Q ss_pred ---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C-CCeEEEEcCCCccc-CCCcceEEeecccccccccCcc
Q 010058 242 ---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E-YADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQGQE 313 (519)
Q Consensus 242 ---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~-~~di~~~S~~K~l~-GprgG~i~~~~~~~~~~~~g~~ 313 (519)
+++++++|+++|+++|+|++|. |+...+.. .+. . ..|+++ ++|+|+ |.+.|++++++
T Consensus 185 ~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~-~~~~~~~~~pdi~t--~sK~l~~G~~ig~~~~~~----------- 249 (375)
T PRK04260 185 KDFVKALADYCQETGILLIVDEVQT-GMGRTGKL-YAFEHYGIEPDIFT--LAKGLANGVPVGAMLAKS----------- 249 (375)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhh-CCCcccch-hhhHhhCCCCCEEE--ecccccCCcceEEEEEcH-----------
Confidence 8999999999999999999984 54333311 010 1 357665 569986 66789999987
Q ss_pred hhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhH-HHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCcceeee
Q 010058 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEY-KAYQEQVLSNSSKFARSLLERG-YDLVSGGTENHLVLV 391 (519)
Q Consensus 314 ~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~v 391 (519)
++.+.+.........+ .+....++..+.++....+++ ++..+.....++.+.+.+.+.+ +..+.+ ...++++
T Consensus 250 ---~~~~~~~~~~~~~t~~-~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~~~~~ 323 (375)
T PRK04260 250 ---SLGGAFGYGSHGSTFG-GNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRG--LGYMIGI 323 (375)
T ss_pred ---HHHhhcCCCCCCCCCC-cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec--cceEEEE
Confidence 5555443322222222 233345555556665543332 3333333344444444444433 222221 2345555
Q ss_pred eccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 392 NLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 392 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
.+. .+..++.+.|.+.||.+. |. ..+.+|++++...+ ++|++++++.|+++
T Consensus 324 ~~~---~~~~~~~~~l~~~Gi~v~----~~-----~~~~lR~~~~~~~t----~~~i~~~l~~l~~~ 374 (375)
T PRK04260 324 ETT---ADLSQLVEAARDKGLIVL----TA-----GTNVIRLLPPLTLT----KEEIEQGIAILSEV 374 (375)
T ss_pred Eec---CcHHHHHHHHHhCCCEEe----cC-----CCCEEEEcCCCccC----HHHHHHHHHHHHHh
Confidence 552 246778888989999985 32 23679999987777 89999999999775
No 295
>PLN02624 ornithine-delta-aminotransferase
Probab=99.63 E-value=3.1e-13 Score=142.52 Aligned_cols=308 Identities=18% Similarity=0.166 Sum_probs=177.6
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcC----
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLK---- 164 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~---- 164 (519)
.|.|.+|+.+.+.+ + .+.... +. ++...+++ +.++++++.+. .+..+||+.|+.+++.....
T Consensus 93 ~p~v~~ai~~ql~~-~--~~~~~~-~~-~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~ 158 (474)
T PLN02624 93 HPKIIKALTEQAEK-L--TLSSRA-FY-NDKFPEFA----EYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE 158 (474)
T ss_pred CHHHHHHHHHHHHh-c--CCcccc-cC-CHHHHHHH----HHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence 89999999998875 3 222211 22 22233333 77777887543 37778899898887763321
Q ss_pred ----C-CC-EEEEecCCCcccccccccccCCceeeeeee------------eEEEeeeeCCCCCCCCHHHHHHHhhh--h
Q 010058 165 ----P-HE-RIMALDLPHGGHLSHGYQTDTKKISAVSIF------------FETMPYRLDESTGYIDYEQLEKSAAL--F 224 (519)
Q Consensus 165 ----p-GD-~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~------------~~~v~~~~d~~~~~iD~d~l~~~i~~--~ 224 (519)
+ |. +|+...-. + ||.-.. .+.+.+.. +..+++ -|++.+++.++. .
T Consensus 159 ~~g~~~~~~~ii~~~~~---y--HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~--------~d~~~l~~~l~~~~~ 223 (474)
T PLN02624 159 KKGIPKNEAIIVSCCGC---F--HGRTLA--AISMSCDNEATRGFGPLLPGHLKVDF--------GDLDALEKIFEEDGD 223 (474)
T ss_pred hcCCCCCCcEEEEECCC---c--CCCCHH--HhhcCCCccccccCCCCCCCceEeCC--------CCHHHHHHHHHhCCC
Confidence 2 33 35554321 1 222100 01111100 111111 268889988864 2
Q ss_pred CCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCC-CC-CCeEEEEcCCCcccC--C
Q 010058 225 RPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSP-FE-YADVVTTTTHKSLRG--P 293 (519)
Q Consensus 225 k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p-~~-~~di~~~S~~K~l~G--p 293 (519)
++++|++.+.+ .|...+ +++|+++|++||+++|+|++|. |+-..+. .... .+ ..|++++| |.++| +
T Consensus 224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~ 300 (474)
T PLN02624 224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVILG--KALGGGVI 300 (474)
T ss_pred CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEec--ccccCCCC
Confidence 56778887333 666665 9999999999999999999986 4322221 0000 00 36888876 77754 4
Q ss_pred CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 010058 294 RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 294 rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (519)
+.|++++++ ++...+.........+ .+....++..++++.+.+. ...++..++.+.|.+.|.
T Consensus 301 pigav~~~~--------------~i~~~~~~~~~~~T~~-g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~ 362 (474)
T PLN02624 301 PVSAVLADK--------------DVMLCIKPGEHGSTFG-GNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQ 362 (474)
T ss_pred cceeeeecH--------------HHHhHhccCCcCCCCC-CCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHH
Confidence 678888876 4444333222222223 3444555555667765443 234455666666666666
Q ss_pred hcC--CE----EecCCCCcceeeeeccCCC---CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCC
Q 010058 374 ERG--YD----LVSGGTENHLVLVNLRNKG---IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFV 444 (519)
Q Consensus 374 ~~g--~~----~~~~~~~~~~~~v~~~~~~---~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~ 444 (519)
++. +. .+.+ . ..+..+.+.... ....++.+.|.+.||.+. |+ ..+.|||+++...+
T Consensus 363 ~l~~~~~~~i~~vrg-~-G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~----p~-----~~~~lR~~p~l~~t---- 427 (474)
T PLN02624 363 KIQKQFPKLIKEVRG-R-GLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAK----PT-----HDTIIRLAPPLSIS---- 427 (474)
T ss_pred HHHHhCCCceEEEEe-e-EEEEEEEecCCCcChHHHHHHHHHHHhCCeEEe----cC-----CCCEEEEECCccCC----
Confidence 542 21 1222 1 123333333211 124567778888999995 33 24679999888777
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010058 445 EEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|.+++..
T Consensus 428 ~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 428 EDELQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999988864
No 296
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.61 E-value=4.6e-13 Score=138.05 Aligned_cols=311 Identities=15% Similarity=0.159 Sum_probs=176.1
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc-----
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL----- 163 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all----- 163 (519)
.|.|.+|+.+.+.. ...++ ..++ .+.+....+++.+..+.+. .+.++||+.|+.+++....
T Consensus 54 ~p~v~~a~~~q~~~-~~~~~--~~~~------~~~~~~la~~l~~~~~~~~-----v~f~~SGseA~e~Aik~ar~~~~~ 119 (395)
T PRK03715 54 NPGMVEALAAQAEK-LINPS--PAFY------NEPMAKLAGLLTQHSCFDK-----VFFANSGAEANEGAIKLARKWGRK 119 (395)
T ss_pred CHHHHHHHHHHHHh-ccccc--cccc------CHHHHHHHHHHhhccCCCE-----EEEeCCcHHHHHHHHHHHHHHhhc
Confidence 68888888887654 21111 1111 2334344466655544332 3777788889998887663
Q ss_pred -CCC-CEEEEecCC-CcccccccccccCCceeeeeee-eEEEeeeeCCC---CCCCCHHHHHHHhhhhCCcEEEEcccc-
Q 010058 164 -KPH-ERIMALDLP-HGGHLSHGYQTDTKKISAVSIF-FETMPYRLDES---TGYIDYEQLEKSAALFRPKLIVAGASA- 235 (519)
Q Consensus 164 -~pG-D~Vl~~~~~-~~~~~~~~~~~~~~~v~~~g~~-~~~v~~~~d~~---~~~iD~d~l~~~i~~~k~klIi~~~sn- 235 (519)
++| .+|+..+.. ||..+. .+.+.|.. +.....+..+. ....|++++++.+.+ ++.+|++.+..
T Consensus 120 ~~~~r~~ii~~~~~yHG~t~~--------~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~ 190 (395)
T PRK03715 120 HKNGAYEIITFDHSFHGRTLA--------TMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQG 190 (395)
T ss_pred cCCCCcEEEEECCCcCCChHH--------HHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcC
Confidence 133 567776633 333221 11122211 00000000000 012478999988875 78888888443
Q ss_pred -cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccC-CCcceEEeeccccc
Q 010058 236 -YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRG-PRGAMIFFRKGVKE 306 (519)
Q Consensus 236 -~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~G-prgG~i~~~~~~~~ 306 (519)
.|...+ +++|+++|++||+++|+|++|. |+-..|.. ..-++ ..|+++++ |.|+| ...|.++++++
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~~--- 264 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKAE--- 264 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceeeeh--hhhhCCcceEEEEEccc---
Confidence 344444 8999999999999999999987 43222210 00011 35888776 99865 23466777773
Q ss_pred ccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----CCEEecC
Q 010058 307 INKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER----GYDLVSG 382 (519)
Q Consensus 307 ~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~ 382 (519)
+.. +......+.+++ +....++..++++.+.+ +...+++.++.++|.+.|+++ ++..+.+
T Consensus 265 -----------i~~-~~~~~~~~T~~g-~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG 328 (395)
T PRK03715 265 -----------VAV-FEAGDQGGTYNG-NPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGERG 328 (395)
T ss_pred -----------ccc-ccCCCcCCCCCC-CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEEc
Confidence 321 111111122222 34445555556766643 345777888888888888764 4332222
Q ss_pred CCCcceeeeeccCCCCcHHHHHHhhccc---CeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 383 GTENHLVLVNLRNKGIDGSRVEKVLESV---HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 383 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~---gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
...+.-+.+... ....+.+.+.+. ||.+.. + .++.|||.++...| ++|++++++.|++++
T Consensus 329 --~Glm~~i~l~~~--~~~~~~~~~~~~~~~Gi~~~~---~------~~~~lR~~p~l~~t----~~ei~~~~~~l~~~l 391 (395)
T PRK03715 329 --EGLLRALLLGKD--IGPQIVEKARDMQPDGLLLNA---P------RPNLLRFMPALNVT----TEEIDQMIAMLRSVL 391 (395)
T ss_pred --ceeEEEEEecCc--hHHHHHHHHHhccCCCEEEee---c------CCCEEEEeCCcccC----HHHHHHHHHHHHHHH
Confidence 223444444321 233444444444 999852 1 13579999998888 999999999999988
Q ss_pred HH
Q 010058 460 KL 461 (519)
Q Consensus 460 ~~ 461 (519)
..
T Consensus 392 ~~ 393 (395)
T PRK03715 392 DK 393 (395)
T ss_pred Hh
Confidence 63
No 297
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.61 E-value=4.5e-13 Score=131.59 Aligned_cols=308 Identities=14% Similarity=0.168 Sum_probs=192.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCce
Q 010058 114 YGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191 (519)
Q Consensus 114 y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v 191 (519)
|+.+.++.+|...+.+.....++.. ...| +|.+|+|.+ +...+++.++++||.|++-..++.+.+. .+
T Consensus 96 Yg~s~G~peLl~fik~h~~~~ih~p~~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~--------s~ 165 (472)
T KOG0634|consen 96 YGQSSGIPELLLFIKDHNRPTIHAPPYKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ--------SM 165 (472)
T ss_pred cccccCcHHHHHHHHHhccccccCCCCCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------hc
Confidence 4556667777744444333233442 3456 799999998 9998999999999999998877766655 34
Q ss_pred eeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh--------hCCcEEEEc--ccc-ccccccH---HHHHHHHhhcCCEEE
Q 010058 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAAL--------FRPKLIVAG--ASA-YARLYDY---ARIRKVCDKQKAVML 257 (519)
Q Consensus 192 ~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~--------~k~klIi~~--~sn-~g~~~d~---~~i~~ia~~~~~~li 257 (519)
...| +..+|++.| ...+|+|.|++.... .+|+++... ..| +|..... ++|.+||++|+.+++
T Consensus 166 ~a~g--v~~ipv~md--~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIV 241 (472)
T KOG0634|consen 166 EALG--VKIIPVKMD--QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIV 241 (472)
T ss_pred cccC--ceEEecccc--CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEE
Confidence 4455 445665554 457899999987752 247888776 344 6765554 689999999999999
Q ss_pred ehhhhhhhccc-------------------cCCCCCCCC----CCeEEEEcCCCcc-cCCCcceEEeecccccccccCcc
Q 010058 258 ADMAHISGLVA-------------------AGVIPSPFE----YADVVTTTTHKSL-RGPRGAMIFFRKGVKEINKQGQE 313 (519)
Q Consensus 258 vD~ah~~g~~~-------------------~~~~~~p~~----~~di~~~S~~K~l-~GprgG~i~~~~~~~~~~~~g~~ 313 (519)
.|+.+..-... ..+.++++. +-.|-.-|++|-+ +|.|.||+.+++
T Consensus 242 eDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~----------- 310 (472)
T KOG0634|consen 242 EDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS----------- 310 (472)
T ss_pred ecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH-----------
Confidence 99875432111 111222221 2335567899977 688889999988
Q ss_pred hhhhHHHHh-hhcccCCCCCCccHHHHHHHHHHHHHhcCHhH----HHHHHHHHHHHHHHHHHHHhc---C-CEEecCCC
Q 010058 314 VMYAYEDKI-NQAVFPGLQGGPHNHTISGLAVALKQVKTPEY----KAYQEQVLSNSSKFARSLLER---G-YDLVSGGT 384 (519)
Q Consensus 314 ~~~~~~~~i-~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~---g-~~~~~~~~ 384 (519)
-+.+++ +.+... .+ +|+.....-+.+-|+...+++| .+.+..+..++.++..+|.+. + +++.. +.
T Consensus 311 ---~~l~ril~~ae~~-t~-~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~-P~ 384 (472)
T KOG0634|consen 311 ---LFLKRILDLAEVA-TS-GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHP-PK 384 (472)
T ss_pred ---HHHHHHhhhccee-ec-CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEec-CC
Confidence 333332 222211 11 2333222223334454444433 555666778888888888875 3 33433 35
Q ss_pred Ccceeeeecc------CCCCc-HH-HHHHhhcccCeEEcccccCCCC------CCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 385 ENHLVLVNLR------NKGID-GS-RVEKVLESVHIAANKNTVPGDV------SAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 385 ~~~~~~v~~~------~~~~~-~~-~~~~~L~~~gI~v~~~~~p~~~------~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
...+.|+.+. ++.++ .. .+...+.+.||.+- +|.. .....-.+|++..... .+++++
T Consensus 385 aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v----~G~~F~v~p~~s~~kiffRls~a~a~-----~e~l~~ 455 (472)
T KOG0634|consen 385 AGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLV----CGSWFMVDPESSWSKIFFRLSIAFAE-----PEKLDE 455 (472)
T ss_pred cceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEe----cCceeEEcCccCCCcceEEEEeecCC-----HHHHHH
Confidence 5667787764 12333 22 23445667899884 4442 1112248999987654 478888
Q ss_pred HHHHHHHHHHH
Q 010058 451 VAEFFDAAVKL 461 (519)
Q Consensus 451 l~~~l~~~l~~ 461 (519)
.++.+..+++.
T Consensus 456 g~~rf~~~ike 466 (472)
T KOG0634|consen 456 GIERFGSVIKE 466 (472)
T ss_pred HHHHHHHHHHH
Confidence 88888887764
No 298
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.59 E-value=8.9e-14 Score=134.64 Aligned_cols=277 Identities=19% Similarity=0.265 Sum_probs=146.5
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCch-hHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNE-YIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHE 167 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~-~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD 167 (519)
...|++|+.+.--..+ ...+..-|+..+ +-+.+| +.+++.||++.+- |..++.|||.|+..++.++|+|||
T Consensus 26 q~KVL~Af~~~~vs~~--hf~~tTGYGY~D~GRd~le----~iyA~vfgaE~AL--VRpq~vSGTHAi~~~Lfg~LrpGD 97 (403)
T PF06838_consen 26 QLKVLKAFQENRVSDS--HFAGTTGYGYDDIGRDKLE----RIYADVFGAEDAL--VRPQFVSGTHAIALALFGVLRPGD 97 (403)
T ss_dssp HHHHHHHHHHTT--GG--GCS---TT-TT-HHHHHHH----HHHHHHCT-SEEE--EETTS-SHHHHHHHHHHHH--TT-
T ss_pred HHHHHHHHHHcCCChh--hcCCCCcCCCCCccHHHHH----HHHHHHhCchhhh--hcccccchHHHHHHHHHhcCCCCC
Confidence 3467777765321111 122233334333 356666 8899999998754 566789999999999999999999
Q ss_pred EEEEecC-CC---------cccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-c
Q 010058 168 RIMALDL-PH---------GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-Y 236 (519)
Q Consensus 168 ~Vl~~~~-~~---------~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~ 236 (519)
+++...- +| .+. .+|. ..-.|..++.+++. +++.+|+|.+++++++ ++|+|++--|- |
T Consensus 98 ~ll~~tG~PYDTL~~VIG~~g~-~~GS------L~e~Gi~Y~~v~L~---~dg~~D~~~i~~~~~~-~tk~v~IQRSrGY 166 (403)
T PF06838_consen 98 ELLSITGKPYDTLEEVIGIRGN-GPGS------LKEFGIKYREVPLT---EDGTIDWEAIKKALKP-NTKMVLIQRSRGY 166 (403)
T ss_dssp EEEESSSS--CCHHHHHTSSSS-SSSS------TGGGT-EEEE--B----TTSSB-HHHHHHHHHT-TEEEEEEE-S-TT
T ss_pred eEEEcCCCchhhHHHHhCCCCC-CCCC------hHHhCceeEEEeec---CCCCcCHHHHHHhhcc-CceEEEEecCCCC
Confidence 9996532 11 000 1111 11236667777754 4589999999999996 99999998444 5
Q ss_pred c--cccc---HHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCCC-CCeEEEEcCCCcccC---CCcceEEeecccc
Q 010058 237 A--RLYD---YARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRG---PRGAMIFFRKGVK 305 (519)
Q Consensus 237 g--~~~d---~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~S~~K~l~G---prgG~i~~~~~~~ 305 (519)
. .... ++++.+++|+. +++++||.++ |-+.... .|.. ++|++.+|.-|+.+| |.||||++++
T Consensus 167 s~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCY--GEFvE~~--EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~--- 239 (403)
T PF06838_consen 167 SWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCY--GEFVETQ--EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK--- 239 (403)
T ss_dssp SSS----HHHHHHHHHHHHHH-TTSEEEEE-TT--TTTTSSS---GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH---
T ss_pred CCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCc--ceecccc--CccccchhheeccceeCCCCCccCcCCEEechH---
Confidence 4 2234 44555555544 7999999984 2222211 1222 899999999999865 6789999998
Q ss_pred cccccCcchhhhHHHHhh-hcccCCCC--CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 306 EINKQGQEVMYAYEDKIN-QAVFPGLQ--GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~-~~~~~~~~--g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
++.++.. +...|+.. .++.....-.+...|=.+ -....+..+-+-..+..++++|+++.+.
T Consensus 240 -----------~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGlFlA-----P~vV~eAlKgaif~A~~fe~lG~~v~P~ 303 (403)
T PF06838_consen 240 -----------DLVERAAYRLTAPGIGKEVGATLGTNRLMFQGLFLA-----PHVVGEALKGAIFAAALFEKLGFEVSPK 303 (403)
T ss_dssp -----------HHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTT-EEES-
T ss_pred -----------HHHHHHHhhhcCCccccccccCcchHHHHHhHHhhc-----hHHHHHHHHHHHHHHHHHHHcCCcCCCC
Confidence 5555432 33445543 122211111122121110 2345555666667777788899998775
Q ss_pred CCCcceeeeeccCCCCcHHHHHHhhc
Q 010058 383 GTENHLVLVNLRNKGIDGSRVEKVLE 408 (519)
Q Consensus 383 ~~~~~~~~v~~~~~~~~~~~~~~~L~ 408 (519)
..+.+.=++.....+ +.+.+..+++
T Consensus 304 ~~~~R~DiIQai~l~-~~e~l~~FC~ 328 (403)
T PF06838_consen 304 PDDPRSDIIQAIELG-SPEKLIAFCQ 328 (403)
T ss_dssp TTS--SSS-EEEE-S-SHHHHHHHHH
T ss_pred CCCCCCceEEEEECC-CHHHHHHHHH
Confidence 433332222211112 4555655554
No 299
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.57 E-value=2.4e-12 Score=136.14 Aligned_cols=331 Identities=16% Similarity=0.143 Sum_probs=179.9
Q ss_pred cCeeecCCC--C---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCC
Q 010058 77 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ-LDPAKWGVNVQSLS 150 (519)
Q Consensus 77 ~~i~L~a~e--n---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g-~~~~~~~~~V~~~s 150 (519)
..|++..+- + .-.|.|.+|+.+.+.. + ++....+....+...+ ..+++.+++. .+.+. ..+..|
T Consensus 90 ~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~-~--~~~~~~~~~~~~~~~~----lae~L~~~~~~~~~~~---v~f~~S 159 (504)
T PLN02760 90 KYLDALAGLWCTALGGSEPRLVAAATEQLNK-L--PFYHSFWNRTTKPSLD----LAKELLEMFTARKMGK---VFFTNS 159 (504)
T ss_pred EEEEcCcCHHhcccCCCCHHHHHHHHHHHhh-c--cceecccccCcHHHHH----HHHHHHhhcCCCCCCE---EEEeCC
Confidence 346665531 1 2478999999998865 2 1111100011222222 3366666653 23222 255678
Q ss_pred cHHHHHHHHHhhc-------CCC-CEEEEecCC-CcccccccccccCCceeeeeee------------eEEEeeeeC---
Q 010058 151 GSPANFQVYTALL-------KPH-ERIMALDLP-HGGHLSHGYQTDTKKISAVSIF------------FETMPYRLD--- 206 (519)
Q Consensus 151 Gs~a~~~~~~all-------~pG-D~Vl~~~~~-~~~~~~~~~~~~~~~v~~~g~~------------~~~v~~~~d--- 206 (519)
|+.|+.+++.... .+| .+|+..+-. ||..+. .+++.|.. +..++++..
T Consensus 160 GsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~--------a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~ 231 (504)
T PLN02760 160 GSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLI--------SASLSGLPALHQKFDLPAPFVLHTDCPHYWRF 231 (504)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHh--------hhhccCChhhccCCCCCCCCcEEeCCCccccc
Confidence 8889998887652 133 567776643 333221 11111110 111221100
Q ss_pred --CCCC-----CCCHHHHHHHhhh---hCCcEEEEccc--ccccccc----HHHHHHHHhhcCCEEEehhhhh-hhcccc
Q 010058 207 --ESTG-----YIDYEQLEKSAAL---FRPKLIVAGAS--AYARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAA 269 (519)
Q Consensus 207 --~~~~-----~iD~d~l~~~i~~---~k~klIi~~~s--n~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~ 269 (519)
+... ...++++++.+.. .++.+|++.|- +.|...+ +++|+++|++||+++|+|++|. .|-...
T Consensus 232 ~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~ 311 (504)
T PLN02760 232 HLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT 311 (504)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch
Confidence 0000 0113456766642 24557777633 2455555 9999999999999999999984 332211
Q ss_pred CC--CCCCCCCCeEEEEcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhhhc-------ccCCCCCCccHHH
Q 010058 270 GV--IPSPFEYADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-------VFPGLQGGPHNHT 338 (519)
Q Consensus 270 ~~--~~~p~~~~di~~~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-------~~~~~~g~~~~~~ 338 (519)
.. ....+ ..|+++++ |.|+|. ..|.+++++ ++.+.+... ...+..++ +...
T Consensus 312 ~~a~e~~gv-~PDivtlg--K~lggG~~PigAv~~~~--------------~i~d~~~~~~~~~~~~~h~~T~~g-nPl~ 373 (504)
T PLN02760 312 MFGCDKYNI-KPDLVSLA--KALSSAYMPIGAVLVSP--------------EISDVIHSQSNKLGSFAHGFTYSG-HPVS 373 (504)
T ss_pred hhHHHhcCC-CCcEEEec--ccccCCccccceEeecH--------------HHHhhhhcccccccCcccCCCCCC-CHHH
Confidence 10 00001 35888886 999763 345677776 455444321 11223333 4445
Q ss_pred HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecC--CCCcceeeeeccCC-C----C--c---HHHHHH
Q 010058 339 ISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSG--GTENHLVLVNLRNK-G----I--D---GSRVEK 405 (519)
Q Consensus 339 iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~-~----~--~---~~~~~~ 405 (519)
.++..++|+.+.+. ...+++.++.++|.+.|+++ ...++.. +. .-+.-+.+... . . + ...+.+
T Consensus 374 ~Aaala~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~ 449 (504)
T PLN02760 374 CAVALEALKIYKER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGT-GLILGTEFVDNKSPNDPFPAEWGVGAYFGA 449 (504)
T ss_pred HHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeC-ceEEEEEEecCCcccccccchhHHHHHHHH
Confidence 55555567766543 45777888888888888765 2222221 11 12233333211 1 0 0 334666
Q ss_pred hhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 406 VLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 406 ~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.|.+.||.+. +. ...+|++++...| ++|++++++++.+++..
T Consensus 450 ~~~~~Gvl~~----~~------g~~lrl~Ppl~it----~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 450 ECKKRGMLVR----VA------GDNIMMSPPLIIT----PEEVDELISIYGKALKA 491 (504)
T ss_pred HHHhCCcEEE----ec------CCEEEEECCCCCC----HHHHHHHHHHHHHHHHH
Confidence 7778999985 21 2469999998888 99999999999998864
No 300
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=2.2e-12 Score=134.65 Aligned_cols=327 Identities=13% Similarity=0.085 Sum_probs=179.6
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+|+.+.+.. . .+.....+. + +.+....+++.+++....+. ....+||+.|+.+++....
T Consensus 59 ~~p~v~~ai~~q~~~-~--~~~~~~~~~-~----~~~~~la~~l~~~~p~~~~~---v~f~~sGseA~e~A~klar~~~~ 127 (423)
T PRK05964 59 NHPYIDQAIREQLDR-L--DHVIFAGFT-H----EPAERLAQRLVALTPGGLDH---VFFSDSGSVAVEVALKMALQYWR 127 (423)
T ss_pred CCHHHHHHHHHHHhh-C--CCccccccC-C----HHHHHHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 368888888887765 2 111100011 1 12223336677776422222 2556788888887777541
Q ss_pred ----CCCCEEEEecCCCcccccccccccCCce---eeeee--eeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEc
Q 010058 164 ----KPHERIMALDLPHGGHLSHGYQTDTKKI---SAVSI--FFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAG 232 (519)
Q Consensus 164 ----~pGD~Vl~~~~~~~~~~~~~~~~~~~~v---~~~g~--~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~ 232 (519)
....+|+...-.|-|............. .+.+. ....++++.+ +....+++++++.+.++ +..+|++.
T Consensus 128 ~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~E 206 (423)
T PRK05964 128 NRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIVE 206 (423)
T ss_pred hcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 1235788776443322110000000000 00000 1223333311 11122378888888642 45567776
Q ss_pred c--cc-ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCcccCC--CcceEEe
Q 010058 233 A--SA-YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSLRGP--RGAMIFF 300 (519)
Q Consensus 233 ~--sn-~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l~Gp--rgG~i~~ 300 (519)
| .. .|. ...+++|+++|++||+++|+|++|. |+...+.. . ..++ ..|+++++ |+|+|+ +.|++++
T Consensus 207 p~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~~a~~~~~v~pDi~~~~--K~l~gG~~p~~av~~ 283 (423)
T PRK05964 207 PLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT-GFGRTGTLFACEQAGVSPDIMCLS--KGLTGGYLPLAATLC 283 (423)
T ss_pred cccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhHHHhcCCCCCeeeee--hhhhcCcccceEEEE
Confidence 5 22 342 2338999999999999999999984 43222210 0 0001 35887765 998654 4578888
Q ss_pred ecccccccccCcchhhhHHHHhhhc-----ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQA-----VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~-----~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
++ ++.+.+... ...+...+.+....++..++++.+..+ ...+++.++.+++.+.|+++
T Consensus 284 ~~--------------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l 346 (423)
T PRK05964 284 TA--------------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDE---PVLERVAALSAGLAEGLEPF 346 (423)
T ss_pred cH--------------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhh
Confidence 77 555544321 111111123555566666677765443 35677777788888888776
Q ss_pred -CCEEecCC-CCcceeeeeccCCC--CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 376 -GYDLVSGG-TENHLVLVNLRNKG--IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 376 -g~~~~~~~-~~~~~~~v~~~~~~--~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
+++.+... ....+..+.+.... .....+.+.|.++||.+. +. .+.+|++++..+| ++|++++
T Consensus 347 ~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~----~~------~~~lR~~p~l~~t----~edId~~ 412 (423)
T PRK05964 347 RDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLR----PL------GNTIYLMPPYIIT----AEELDRI 412 (423)
T ss_pred ccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEE----ec------CCEEEEeCCcccC----HHHHHHH
Confidence 33332211 11233344443211 014567788888999986 21 2479999999888 9999999
Q ss_pred HHHHHHHHH
Q 010058 452 AEFFDAAVK 460 (519)
Q Consensus 452 ~~~l~~~l~ 460 (519)
++.+++++.
T Consensus 413 v~~l~~al~ 421 (423)
T PRK05964 413 TDAIVEVAD 421 (423)
T ss_pred HHHHHHHHh
Confidence 999999885
No 301
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.56 E-value=1.4e-12 Score=127.10 Aligned_cols=339 Identities=17% Similarity=0.216 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHhcc-cCeeecC-------CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010058 63 EIADIIELEKARQW-KGLELIP-------SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA 134 (519)
Q Consensus 63 ~~~~~~~~e~~~~~-~~i~L~a-------~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~ 134 (519)
.+..+.+.-.+..+ +-|||.. +..++-+.|.+|-...+.+.. ...|.+-++.+...+.+++ -+
T Consensus 12 pIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~------~k~Yl~i~G~~~f~~~~~~---ll 82 (396)
T COG1448 12 PILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEK------TKNYLPIEGLPEFLEAVQK---LL 82 (396)
T ss_pred chhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccc------ccccCCcCCcHHHHHHHHH---Hh
Confidence 34455555444333 4578763 334556788888777666532 2445666676666644333 36
Q ss_pred cCCC-----CCCCcceEEeCCcHHHHHHH--HHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC
Q 010058 135 FQLD-----PAKWGVNVQSLSGSPANFQV--YTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE 207 (519)
Q Consensus 135 ~g~~-----~~~~~~~V~~~sGs~a~~~~--~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~ 207 (519)
||.+ .+.+ +.+|..+||-|+..+ +.+-..|..+|-+++++.+.|.. .+...|..+...|| .|.
T Consensus 83 FG~d~~~l~~~Rv-~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~--------If~~aGl~v~~Y~Y-yd~ 152 (396)
T COG1448 83 FGADSPALAEDRV-ATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA--------IFEAAGLEVETYPY-YDA 152 (396)
T ss_pred cCCCcHHHHhhhH-hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH--------HHHhcCCceeeeec-ccc
Confidence 8854 2232 458888888766533 23335688889999988888865 33455766666666 466
Q ss_pred CCCCCCHHHHHHHhhhhCC-cEEEEc--ccc-ccc---cccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CC--
Q 010058 208 STGYIDYEQLEKSAALFRP-KLIVAG--ASA-YAR---LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PF-- 276 (519)
Q Consensus 208 ~~~~iD~d~l~~~i~~~k~-klIi~~--~sn-~g~---~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~-- 276 (519)
++..+|++.+.+.++.... .+|++- .+| ||. ...|++|.++.++.+.+.+.|.|+. |.-. |+... ++
T Consensus 153 ~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQ-GF~~-GleeDa~~lR~ 230 (396)
T COG1448 153 ETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQ-GFAD-GLEEDAYALRL 230 (396)
T ss_pred ccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhh-hhcc-chHHHHHHHHH
Confidence 7788999998887775333 344443 455 663 3447899999999999999999843 2211 11000 00
Q ss_pred ---CC-CeEEEEcCCCcc--cCCCcc-eEEeecccccccccCcchhhhHHHHhhh---cccCCCCCCccHHHHHHHHHH-
Q 010058 277 ---EY-ADVVTTTTHKSL--RGPRGA-MIFFRKGVKEINKQGQEVMYAYEDKINQ---AVFPGLQGGPHNHTISGLAVA- 345 (519)
Q Consensus 277 ---~~-~di~~~S~~K~l--~GprgG-~i~~~~~~~~~~~~g~~~~~~~~~~i~~---~~~~~~~g~~~~~~iaal~~a- 345 (519)
.+ --+++.|++|++ .|-|.| +.++..+. +...++.. .......++|+.+...-.+.-
T Consensus 231 ~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~------------~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL 298 (396)
T COG1448 231 FAEVGPELLVASSFSKNFGLYGERVGALSVVAEDA------------EEADRVLSQLKAIIRTNYSNPPAHGAAVVATIL 298 (396)
T ss_pred HHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCH------------HHHHHHHHHHHHHHHhccCCCchhhHHHHHHHh
Confidence 01 157888999975 577775 33333321 22221111 112233466666665544432
Q ss_pred ----HHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC----CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEccc
Q 010058 346 ----LKQVKTPEYKAYQEQVLSNSSKFARSLLERG----YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKN 417 (519)
Q Consensus 346 ----l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~ 417 (519)
|+..-..+...+++++.+.|+.|.+.|++.| |..+... ..+ +.+ .|++.+++.++.++.||.+..
T Consensus 299 ~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q--~GM--Fsy--~Gls~~QV~rLree~~IY~v~- 371 (396)
T COG1448 299 NNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFIISQ--RGM--FSY--TGLSPEQVDRLREEFGIYLVA- 371 (396)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhc--Cce--eec--CCCCHHHHHHHHHhccEEEec-
Confidence 3322233567888999999999999999953 4444321 222 222 277899999999999999851
Q ss_pred ccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 418 TVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 418 ~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
++ ||+...+++ ..++.+++.|.++
T Consensus 372 -----------sG-Ri~vaGl~~-----~ni~~va~ai~~v 395 (396)
T COG1448 372 -----------SG-RINVAGLNT-----SNIDYVAKAIAAV 395 (396)
T ss_pred -----------CC-eeeeccCCh-----hhHHHHHHHHHhh
Confidence 22 888766655 8999999999875
No 302
>PLN00144 acetylornithine transaminase
Probab=99.56 E-value=2.5e-12 Score=132.23 Aligned_cols=315 Identities=15% Similarity=0.149 Sum_probs=176.4
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc---C
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---K 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---~ 164 (519)
-.|.|.+|+.+.+.. . .+.+. .+. ++. .....+++.+..+.+. -....||+.|+.+++.... .
T Consensus 32 ~~p~v~~ai~~q~~~-~--~~~~~-~~~-~~~----~~~la~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~~ 97 (382)
T PLN00144 32 GDPDWVKAVAEQAGT-L--AHVSN-VYH-TIP----QVELAKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQR 97 (382)
T ss_pred CCHHHHHHHHHHHHh-c--CCccc-ccc-CHH----HHHHHHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHHh
Confidence 478999999888765 2 12221 111 121 1223355666655432 2666788888887766431 1
Q ss_pred ------C------CCEEEEecCCC-cccccccccccCCcee--eee--eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCc
Q 010058 165 ------P------HERIMALDLPH-GGHLSHGYQTDTKKIS--AVS--IFFETMPYRLDESTGYIDYEQLEKSAALFRPK 227 (519)
Q Consensus 165 ------p------GD~Vl~~~~~~-~~~~~~~~~~~~~~v~--~~g--~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~k 227 (519)
+ ..+|+...-.| |.+............. +.. ..+..++ .-|++.+++.+...+++
T Consensus 98 ~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~~~~~~~a 169 (382)
T PLN00144 98 VRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVE--------YGNLEAARKLIQKGKTA 169 (382)
T ss_pred ccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeC--------CCCHHHHHHhcCCCCeE
Confidence 1 24677776433 2221111000000000 000 0011111 12689999888655788
Q ss_pred EEEEccccc-ccc---cc--HHHHHHHHhhcCCEEEehhhhhhhccccCCC-CC-CCC-CCeEEEEcCCCccc-CCCcce
Q 010058 228 LIVAGASAY-ARL---YD--YARIRKVCDKQKAVMLADMAHISGLVAAGVI-PS-PFE-YADVVTTTTHKSLR-GPRGAM 297 (519)
Q Consensus 228 lIi~~~sn~-g~~---~d--~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~~-p~~-~~di~~~S~~K~l~-GprgG~ 297 (519)
+|++.|... |.. .. +++|+++|++||+++|+|+++. |+-..+.. +. -.. ..|++++| |+|+ |.+.|+
T Consensus 170 avi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PDi~t~s--K~l~~G~pig~ 246 (382)
T PLN00144 170 AVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPDIMTLA--KPLAGGLPIGA 246 (382)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCCEEEec--ccccCCcceEE
Confidence 888885442 211 23 8899999999999999999975 33222211 00 001 35777665 9884 566799
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-- 375 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 375 (519)
+++++ ++.+.+.........+ .+....++..++++.+.+..+ .+++.+..+.+.+.|.+.
T Consensus 247 v~~~~--------------~~~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~~~~ 308 (382)
T PLN00144 247 VLVTE--------------KVASAINPGDHGSTFA-GGPLVCNAALAVLDKISKPGF---LASVAKKGEYLRELLRRKLG 308 (382)
T ss_pred EEEcH--------------HHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHhhchH---HHHHHHHHHHHHHHHHHHHh
Confidence 99987 5555443322222223 334445555566777755444 444555555555544432
Q ss_pred CCEEecC--CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 376 GYDLVSG--GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 376 g~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
....+.. + ...+.++.+. .+...+...+.+.||.+. |+.. .+.||++++...+ ++|+++.++
T Consensus 309 ~~~~~~~vrg-~G~~~~l~l~---~~~~~~~~~~~~~Gv~i~----~~~~----~~~lrl~p~~~~~----~~~i~~~~~ 372 (382)
T PLN00144 309 GNPHVKEVRG-VGLLVGIQLD---VPAGPLVDACRDSGLLVL----TAGK----GDVVRLVPPLVIS----EAELEQAVE 372 (382)
T ss_pred hCCCceeeec-CceEEEEEec---CccHHHHHHHHHCCeEEe----ecCC----CCEEEEeCCCccC----HHHHHHHHH
Confidence 2211111 2 2345566652 235667888889999985 3321 3689999987666 799999999
Q ss_pred HHHHHHHH
Q 010058 454 FFDAAVKL 461 (519)
Q Consensus 454 ~l~~~l~~ 461 (519)
.|.+++..
T Consensus 373 ~l~~~l~~ 380 (382)
T PLN00144 373 ILADCLPA 380 (382)
T ss_pred HHHHHHHh
Confidence 99998863
No 303
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.56 E-value=1.3e-12 Score=135.08 Aligned_cols=318 Identities=14% Similarity=0.135 Sum_probs=177.5
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+|+.+.+.+-. +.+..++ ++. .....+++.+++... +. ....+||+.|+.+++....
T Consensus 57 ~~p~v~~ai~~q~~~~~---~~~~~~~--~~~----~~~la~~L~~~~~~~-~~---v~f~~sGseA~e~AlklAr~~~~ 123 (408)
T PRK04612 57 NDPDLVAALTEQAGKLW---HTSNVFY--SAP----PLKLAEELVTASRFA-EK---VFLCNSGTEANEAAIKLVRKWAS 123 (408)
T ss_pred CCHHHHHHHHHHHHhcc---ccccccC--CHH----HHHHHHHHHhhCCCC-CE---EEEcCchHHHHHHHHHHHHHHHH
Confidence 47888888888776421 1111111 111 122335665655322 22 2556778888887776432
Q ss_pred --C--C-CCEEEEecCCC-cccccccccccCCceeeeeeeeEEEeee-eCCC---CCCCCHHHHHHHhhhhCCcEEEEcc
Q 010058 164 --K--P-HERIMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYR-LDES---TGYIDYEQLEKSAALFRPKLIVAGA 233 (519)
Q Consensus 164 --~--p-GD~Vl~~~~~~-~~~~~~~~~~~~~~v~~~g~~~~~v~~~-~d~~---~~~iD~d~l~~~i~~~k~klIi~~~ 233 (519)
. + ..+|+.....| |..... +.+.+.......+. ..++ -..-|.+.+++.+...++.+|++.|
T Consensus 124 ~~g~~~~r~~ii~~~~~yHG~t~~~--------~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP 195 (408)
T PRK04612 124 SQGRPADKRVIVTFRGSFHGRTLAA--------VTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEP 195 (408)
T ss_pred hhCCCCCCcEEEEECCCcCCccHHH--------HHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECC
Confidence 1 1 23677766433 222111 11111000000000 0000 0122788898888654566777765
Q ss_pred cc-cccc-c----cHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCccc-CCCcceEEeecc
Q 010058 234 SA-YARL-Y----DYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLR-GPRGAMIFFRKG 303 (519)
Q Consensus 234 sn-~g~~-~----d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~-GprgG~i~~~~~ 303 (519)
.+ .|.. . -+++|+++|++||+++|+|++|. |+-..+.. ....+ ..|++++| |+++ |.+.|++++++
T Consensus 196 ~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~--K~l~~G~piga~~~~~- 271 (408)
T PRK04612 196 IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLA--KALGGGFPIGAMLAGP- 271 (408)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEc--chhcCCCceEEEEECH-
Confidence 55 4322 1 38899999999999999999975 43222210 00001 34666665 8884 55668888876
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCEEec
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYDLVS 381 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 381 (519)
++.+.+.........+ .+....++..++|+.+.+ ++..++..++.++|.+.|+++ .+.++.
T Consensus 272 -------------~~~~~~~~~~~~~t~~-~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~ 334 (408)
T PRK04612 272 -------------KVAETMQFGAHGTTFG-GNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFA 334 (408)
T ss_pred -------------HHHhhhcCCCcCCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCee
Confidence 4544443322222233 345555555666776654 345677788888888888775 233332
Q ss_pred C--CCCcceeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 382 G--GTENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 382 ~--~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
. +. ..+.-+.+.+. .-....+.+.|.+.||.+. |. +.+.||+.++...+ ++|++++++.|.++
T Consensus 335 ~vrg~-Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~----~~-----g~~~lRl~Ppl~it----~eeid~~l~~l~~~ 400 (408)
T PRK04612 335 QVRGR-GLMLGAVLAPAHAGQAGAILDLAAEHGLLLL----QA-----GPDVLRFVPALNLT----DAELADGLARLRLA 400 (408)
T ss_pred eeecc-ceEEEEEecCchhhHHHHHHHHHHHCCeEEe----eC-----CCCEEEEcCCccCC----HHHHHHHHHHHHHH
Confidence 2 12 22333333221 1124567778888999985 21 23689999988777 89999999999999
Q ss_pred HHH
Q 010058 459 VKL 461 (519)
Q Consensus 459 l~~ 461 (519)
+..
T Consensus 401 l~~ 403 (408)
T PRK04612 401 LAD 403 (408)
T ss_pred HHH
Confidence 864
No 304
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.56 E-value=8.4e-13 Score=127.56 Aligned_cols=165 Identities=19% Similarity=0.143 Sum_probs=121.8
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccc
Q 010058 107 GYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQT 186 (519)
Q Consensus 107 g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~ 186 (519)
||...|. .++..+.+| +|++.+-|--. .+.+.||..|...++..++++||.|+..+.-|||..+-...+
T Consensus 53 G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~t 121 (426)
T COG2873 53 GNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHT 121 (426)
T ss_pred Cceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHH
Confidence 5544443 346678888 88888776543 378899999988899999999999999988888876533322
Q ss_pred cCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhh
Q 010058 187 DTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHIS 264 (519)
Q Consensus 187 ~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~ 264 (519)
. .-.|+.++++ | ..|++.+++++++ +||+|++. -.| -+.+.|++.|.++|+++|+++|+|..-..
T Consensus 122 l----~~~Gi~v~fv----d----~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at 188 (426)
T COG2873 122 L----KRLGIEVRFV----D----PDDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT 188 (426)
T ss_pred H----HhcCcEEEEe----C----CCCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc
Confidence 1 1235444443 2 2369999999998 99999998 444 45889999999999999999999987433
Q ss_pred hccccCCCCCCCC-CCeEEEEcCCCcccCCCc---ceEEe
Q 010058 265 GLVAAGVIPSPFE-YADVVTTTTHKSLRGPRG---AMIFF 300 (519)
Q Consensus 265 g~~~~~~~~~p~~-~~di~~~S~~K~l~Gprg---G~i~~ 300 (519)
+ ..-.|++ ++|||+.|.+|+++|..- |+|+-
T Consensus 189 p-----yl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 189 P-----YLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred c-----eecchhhcCCCEEEEeecccccCCccccceEEEe
Confidence 3 2223555 799999999999976532 55543
No 305
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=3.4e-12 Score=133.57 Aligned_cols=328 Identities=13% Similarity=0.076 Sum_probs=179.2
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCcHHHHHHHHHhh--cC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS-LSGSPANFQVYTAL--LK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~-~sGs~a~~~~~~al--l~ 164 (519)
-.|.|.+|+.+.+.. +..+..+. + .++... ...+++++++.-..+ .|.+ +||+.|+.+++... ..
T Consensus 60 ~~p~v~~a~~~q~~~-~~~~~~~~--~-~~~~~~----~la~~L~~~~~~~~~----~v~f~~SGseA~e~AlklAr~~t 127 (433)
T PRK08117 60 RHPKVVQAIKEQADK-LMHGPSGV--I-YYESIL----KLAEELAEITPGGLD----CFFFSNSGAEAIEGALKLAKHVT 127 (433)
T ss_pred CCHHHHHHHHHHHHh-ccCccccc--c-CCHHHH----HHHHHHHHhCCCCCC----EEEEeCcHHHHHHHHHHHHHHhc
Confidence 478899999888765 31111111 1 112222 333777777732222 2454 78888999877753 22
Q ss_pred CCCEEEEecCC-CcccccccccccC-----Cc--eeeeeeeeEEEeeeeC---CCC---C---CCCHHHHHHHhhh----
Q 010058 165 PHERIMALDLP-HGGHLSHGYQTDT-----KK--ISAVSIFFETMPYRLD---EST---G---YIDYEQLEKSAAL---- 223 (519)
Q Consensus 165 pGD~Vl~~~~~-~~~~~~~~~~~~~-----~~--v~~~g~~~~~v~~~~d---~~~---~---~iD~d~l~~~i~~---- 223 (519)
...+|+..+-. ||.+......... +. ....+ +..+|++.. +.. . .-|++++++.+..
T Consensus 128 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 205 (433)
T PRK08117 128 KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGS--VYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTP 205 (433)
T ss_pred CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCC--cEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCC
Confidence 33567766533 3333211000000 00 00001 122333210 000 0 0256667776642
Q ss_pred hCCcEEEEc--ccccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCccc-CC
Q 010058 224 FRPKLIVAG--ASAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLR-GP 293 (519)
Q Consensus 224 ~k~klIi~~--~sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~-Gp 293 (519)
.++.+|++. .++.|...+ +++++++|++||+++|+|++|. |+...+.. ...++ ..|+++ +.|+|+ |.
T Consensus 206 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi~t--~sK~lg~G~ 282 (433)
T PRK08117 206 EEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDIMT--IAKGIASGL 282 (433)
T ss_pred CcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCEee--hhhhccCCC
Confidence 246677776 333555556 9999999999999999999987 54333211 00011 257654 459885 55
Q ss_pred CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 010058 294 RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 294 rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (519)
+.|++++++ ++.+.+......+.. +.+....++..++++.+... ...+++.++.+++.+.|.
T Consensus 283 pigav~~~~--------------~i~~~~~~~~~~~T~-~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~ 344 (433)
T PRK08117 283 PLSAVVASK--------------ELMEQWPLGSHGTTF-GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLE 344 (433)
T ss_pred cceeEEEcH--------------HHHhhccCCCCCCCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHH
Confidence 668888887 555544322222222 23455566666677766432 356667777778887777
Q ss_pred hcC--CEEecCCC-CcceeeeeccCCC-----CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCH
Q 010058 374 ERG--YDLVSGGT-ENHLVLVNLRNKG-----IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVE 445 (519)
Q Consensus 374 ~~g--~~~~~~~~-~~~~~~v~~~~~~-----~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~ 445 (519)
++. +.++.... ...+..+.+.... .....+.+.|.+.||.+. +... ..+.+|++++...+ +
T Consensus 345 ~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g~---~~~~lRl~p~~~~t----~ 413 (433)
T PRK08117 345 VLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFY----LCGN---AGNVLRMIPPLTVT----K 413 (433)
T ss_pred HHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEe----ecCC---CCCEEEEeCCccCC----H
Confidence 652 32222111 1123334443211 113446677778999885 2111 24689999988888 8
Q ss_pred HHHHHHHHHHHHHHHH
Q 010058 446 EDFEKVAEFFDAAVKL 461 (519)
Q Consensus 446 ~di~~l~~~l~~~l~~ 461 (519)
+|++++++.|.+++..
T Consensus 414 ~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 414 EEIDEGLDILDEALTE 429 (433)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 306
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.55 E-value=7.7e-12 Score=127.53 Aligned_cols=340 Identities=17% Similarity=0.103 Sum_probs=189.2
Q ss_pred cCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCC
Q 010058 77 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSLS 150 (519)
Q Consensus 77 ~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~s 150 (519)
..|++.++-+ .-.|.|.+|+.+.+.. . .+...++... +... ...+++.+.+..+ .+ ..+..+|
T Consensus 57 ~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~-~--~h~~~~~~~~-e~~v----~~ae~L~~~~p~~~~~---~~~f~~s 125 (447)
T COG0160 57 EYLDFLSGIAVLNLGHNHPRVVEAVKRQLAK-L--NHTHTRDLYY-EPYV----ELAEKLTALAPGSGLK---KVFFGNS 125 (447)
T ss_pred EEEEcccCcchhccCCCCHHHHHHHHHHHHH-h--hcccCCcccc-hhHH----HHHHHHHHhCCcccCC---eEEecCC
Confidence 3466655433 2489999999987654 2 1112222221 2222 2225666666542 22 2466778
Q ss_pred cHHHHHHHHHhh--cCCCCEEEEecCCC-cccccccccccCCcee-----eeeeeeEEEeeeeCCCC---------CCCC
Q 010058 151 GSPANFQVYTAL--LKPHERIMALDLPH-GGHLSHGYQTDTKKIS-----AVSIFFETMPYRLDEST---------GYID 213 (519)
Q Consensus 151 Gs~a~~~~~~al--l~pGD~Vl~~~~~~-~~~~~~~~~~~~~~v~-----~~g~~~~~v~~~~d~~~---------~~iD 213 (519)
|+.||.+++... ...+..|+.+.-.+ |........+...... -....+..+||+..... ..-.
T Consensus 126 GaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 126 GAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHH
Confidence 888999877754 33446677665443 3222211111111111 01112445555422110 0112
Q ss_pred HHHHHHHhhh-----hCCcEEEEcccc--ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC----C
Q 010058 214 YEQLEKSAAL-----FRPKLIVAGASA--YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE----Y 278 (519)
Q Consensus 214 ~d~l~~~i~~-----~k~klIi~~~sn--~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~----~ 278 (519)
.+.+++.+.. .++.+||+.+-- -|. ..-+++++++|++||+++|+|+.|. |.-..| .-+.++ .
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt-G~GRTG-~~fa~E~~gv~ 283 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT-GFGRTG-KMFAFEHFGVE 283 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccc-cchhhhhcCCC
Confidence 3445554432 246788887322 332 2238999999999999999999975 322222 111111 3
Q ss_pred CeEEEEcCCCcccC-CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 279 ADVVTTTTHKSLRG-PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 279 ~di~~~S~~K~l~G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
.|++|++ |.++| ...|.+++++ ++.+ +....+.+..++.+....+| .+.|+.+.+ +.+
T Consensus 284 PDivt~a--K~ig~G~Pl~avv~r~--------------ei~~-~~~g~~~~Tf~GNpva~Aaa-~AvL~vie~---e~L 342 (447)
T COG0160 284 PDIVTLA--KSLGGGLPLSAVVGRA--------------EIMD-WPPGGHGGTFGGNPVACAAA-LAVLDVIEE---ENL 342 (447)
T ss_pred CCEEEec--ccccCCCceeEEeccH--------------Hhcc-cCCcccCCCCCcCHHHHHHH-HHHHHHHHH---ccH
Confidence 6999998 88865 4448888887 4433 22223333344444333333 345555443 367
Q ss_pred HHHHHHHHHHHHHHHHhc--CCEEecCCCC-cceeeeeccCC----CCc---HHHHHHhhcccCeEEcccccCCCCCCCC
Q 010058 358 QEQVLSNSSKFARSLLER--GYDLVSGGTE-NHLVLVNLRNK----GID---GSRVEKVLESVHIAANKNTVPGDVSAMV 427 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~--g~~~~~~~~~-~~~~~v~~~~~----~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~ 427 (519)
.++..+.-++|.+.|.++ .++.+.+-.. ..+.-+.+... ..+ ...+.+.+.+.|+.+..+ | ..
T Consensus 343 ~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~---G----~~ 415 (447)
T COG0160 343 LERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTC---G----PH 415 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEecc---C----CC
Confidence 788888888888888776 4555554211 22333444321 122 234666777899887522 1 12
Q ss_pred CCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 428 PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 428 ~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+.|||.++...+ ++++++.+++|.+++..
T Consensus 416 ~nviRi~PPL~is----~e~~d~~l~il~~al~~ 445 (447)
T COG0160 416 GNVLRILPPLTIS----DEELDEGLDILEEALKE 445 (447)
T ss_pred CcEEEEeCCcccC----HHHHHHHHHHHHHHHHh
Confidence 5789999998888 89999999999999874
No 307
>PRK12403 putative aminotransferase; Provisional
Probab=99.54 E-value=7.1e-12 Score=131.62 Aligned_cols=329 Identities=15% Similarity=0.120 Sum_probs=169.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc---
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYG-GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL--- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~-~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all--- 163 (519)
-.|.|.+|+.+.+.. + ++. ..+++ ..+...++. ++++++++...+. -+.++||+.|+.+++....
T Consensus 71 ~hp~v~~A~~~q~~~-~--~~~-~~~~~~~~~~~~~la----e~L~~~~p~~~~~---v~f~~SGseA~e~AiklAr~~~ 139 (460)
T PRK12403 71 GRKDLAAAAARQMEQ-L--PYY-NMFFHTTHPAVIELS----ELLFSLLPGHYSH---AIYTNSGSEANEVLIRTVRRYW 139 (460)
T ss_pred CCHHHHHHHHHHHHh-C--CCe-ecccccCCHHHHHHH----HHHHHhCCCCcCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 468999999988765 3 111 11211 223333333 7777887643222 3677889989998877653
Q ss_pred ----CCCCEEEE-ecCC-CcccccccccccCCcee-eee--eeeEEEeeeeC-CCCCC--------CCHHHHHHHhhh--
Q 010058 164 ----KPHERIMA-LDLP-HGGHLSHGYQTDTKKIS-AVS--IFFETMPYRLD-ESTGY--------IDYEQLEKSAAL-- 223 (519)
Q Consensus 164 ----~pGD~Vl~-~~~~-~~~~~~~~~~~~~~~v~-~~g--~~~~~v~~~~d-~~~~~--------iD~d~l~~~i~~-- 223 (519)
+++..+++ .... ||..+............ ..+ ..+..++++.. ...+. .+.+++++.+.+
T Consensus 140 ~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~ 219 (460)
T PRK12403 140 QVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG 219 (460)
T ss_pred HhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC
Confidence 23444443 3222 33322111000000000 000 00122222110 00000 113556655532
Q ss_pred -hCCcEEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC--CCCCCC-CCeEEEEcCCCcccCC
Q 010058 224 -FRPKLIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV--IPSPFE-YADVVTTTTHKSLRGP 293 (519)
Q Consensus 224 -~k~klIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~p~~-~~di~~~S~~K~l~Gp 293 (519)
.+..+|++.+ ++.|...+ +++++++|++||+++|+|++|. |+-..|. ...-++ ..|+++++ |+|+|.
T Consensus 220 ~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~~g--K~lggG 296 (460)
T PRK12403 220 AENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG-GFGRTGEWFAHEHFGFEPDTLSIA--KGLTSG 296 (460)
T ss_pred CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhhhhhcCCCCCeEEEc--cccccc
Confidence 2455677763 33455555 8999999999999999999984 3311111 000011 35899865 998643
Q ss_pred --CcceEEeecccccccccCcchhhhHHHHhhh--cc--cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH-HHHH
Q 010058 294 --RGAMIFFRKGVKEINKQGQEVMYAYEDKINQ--AV--FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL-SNSS 366 (519)
Q Consensus 294 --rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~--~~--~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~-~~~~ 366 (519)
..|.+++++ ++.+.+.. .. +.+..+ .+....++..++|+.+.++. ..+++. ++.+
T Consensus 297 ~~Piga~v~~~--------------~i~~~~~~~~~~~~~~~T~~-gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~ 358 (460)
T PRK12403 297 YVPMGGLVLSK--------------RIAEALVEQGGVFAHGLTYS-GHPVAAAVAIANLKALRDEG---VVTRVKDDTGP 358 (460)
T ss_pred ccceEEEEECH--------------HHHHHHhcCCCccccCCCCC-CCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHH
Confidence 335555666 44444321 11 112222 34555555556777665433 456664 6677
Q ss_pred HHHHHHHhc--CCEEecCCC-CcceeeeeccCCC-----Cc-----HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEe
Q 010058 367 KFARSLLER--GYDLVSGGT-ENHLVLVNLRNKG-----ID-----GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRM 433 (519)
Q Consensus 367 ~l~~~L~~~--g~~~~~~~~-~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 433 (519)
+|.+.|++. ...++..-. ...+.-+.+.... .. ...+...+.+.|+.+.. . .+.+|+
T Consensus 359 ~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~----~------~~~~~l 428 (460)
T PRK12403 359 YLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRS----T------LGRMIM 428 (460)
T ss_pred HHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEe----c------CCEEEE
Confidence 777777653 233222211 1123333332110 01 12234455678999851 1 135899
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.++...| ++|++++++++++++...
T Consensus 429 ~Ppl~it----~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 429 APALVAG----RAEIDELVDKTRIAVDRT 453 (460)
T ss_pred ECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 9888777 899999999999999753
No 308
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.54 E-value=1e-11 Score=129.80 Aligned_cols=330 Identities=14% Similarity=0.078 Sum_probs=178.2
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~p 165 (519)
-.|.|.+|+.+.+.+.. +....++ ..+ .+....+++.+.++...+. -....||+.|+.+++... ...
T Consensus 58 ~~p~v~~Ai~~ql~~~~---~~~~~~~-~~~----~~~~la~~L~~~~p~~~~~---v~f~~sGsEAve~AlklAr~~tg 126 (443)
T PRK08360 58 NNPRVVKAIKEQTDKLI---HYTPIYG-FPV----EPLLLAEKLIEIAPGDNPK---VSFGLSGSDANDGAIKFARAYTK 126 (443)
T ss_pred CCHHHHHHHHHHHHhcc---Ccccccc-CcH----HHHHHHHHHHHhCCCCCCE---EEEcCCHHHHHHHHHHHHHHhcC
Confidence 47888888888876521 1111111 111 2222336666776543222 245567777888777643 233
Q ss_pred CCEEEEecCC-CcccccccccccCCcee--eee--eeeEEEeeeeCCC-CC--------CCCHHHHHHHhhh----hCCc
Q 010058 166 HERIMALDLP-HGGHLSHGYQTDTKKIS--AVS--IFFETMPYRLDES-TG--------YIDYEQLEKSAAL----FRPK 227 (519)
Q Consensus 166 GD~Vl~~~~~-~~~~~~~~~~~~~~~v~--~~g--~~~~~v~~~~d~~-~~--------~iD~d~l~~~i~~----~k~k 227 (519)
..+|+..... ||.+............. ..+ ..+..++++-... .+ .-+++.+++.+.. .+++
T Consensus 127 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iA 206 (443)
T PRK08360 127 RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVA 206 (443)
T ss_pred CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeE
Confidence 4567665533 33322111100000000 000 0122333321000 00 0134556666642 3688
Q ss_pred EEEEccc-c-cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCcc-cCCCcce
Q 010058 228 LIVAGAS-A-YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSL-RGPRGAM 297 (519)
Q Consensus 228 lIi~~~s-n-~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l-~GprgG~ 297 (519)
+|++.|. + .|...+ +++++++|++||+++|+|++|. |+...+.. . .-++ ..|++++ +|++ +|++.|+
T Consensus 207 Avi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDiitl--sK~l~~G~piga 283 (443)
T PRK08360 207 ALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIITL--GKPLGGGLPISA 283 (443)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEEEe--cccccCCceeEE
Confidence 8988853 2 453333 8899999999999999999976 33222211 0 0011 3578766 5887 4567799
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-- 375 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 375 (519)
+++++ ++.+.+.........++ +....++..++++.+.+. ...+++.++.++|.+.|+++
T Consensus 284 v~~~~--------------~i~~~~~~~~~~~T~~~-~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~ 345 (443)
T PRK08360 284 TIGRA--------------EIMDSLPPLAHAFTLSG-NPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKK 345 (443)
T ss_pred EEEcH--------------HHHhhhcCCCCCCCCCc-CHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 55555433222222233 333355555667766443 34667777777777777664
Q ss_pred CCEEecCCC-CcceeeeeccCC----CC---cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHH
Q 010058 376 GYDLVSGGT-ENHLVLVNLRNK----GI---DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEED 447 (519)
Q Consensus 376 g~~~~~~~~-~~~~~~v~~~~~----~~---~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~d 447 (519)
.+.++..-. ..-+.-+.+... .. ....+...|.+.||.+.. . ..+.+|+.++...+ ++|
T Consensus 346 ~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-----~~~~lr~~P~l~~t----~~~ 412 (443)
T PRK08360 346 KHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTF----F-----SGNVLRIQPPLTIE----KEV 412 (443)
T ss_pred hCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEee----c-----CCCEEEEeCCCCCC----HHH
Confidence 233332211 112333333211 00 123566777889999852 1 13679999998888 999
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 448 FEKVAEFFDAAVKLA 462 (519)
Q Consensus 448 i~~l~~~l~~~l~~~ 462 (519)
++++++.|.+++...
T Consensus 413 id~~~~~l~~~l~~~ 427 (443)
T PRK08360 413 LDEGLDILEEAIEDV 427 (443)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999764
No 309
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.53 E-value=4.9e-13 Score=132.24 Aligned_cols=230 Identities=16% Similarity=0.138 Sum_probs=146.1
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYG-GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL 162 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~-~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al 162 (519)
+.+..++++++++..++.... +- .+|- .......+. ...+..+..+|++. .+.+.+.+.|.+.+..++
T Consensus 35 G~s~~~~e~iea~~~~~~~~v-~L----e~~l~~g~~~~R~~-~~~~~~~~~~~aea-----~~ivnnn~aAVll~~~al 103 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRAPV-EL----ETDLKTGKRGARLT-ELAELLCGLTGAEA-----AAIVNNNAAAVLLTLNAL 103 (395)
T ss_pred CCccCCHHHHHHHHHHhcccc-ee----eeecccchhhHHHH-HHHHHHhcccchhh-----eeeECCcHHHHHHHHhhh
Confidence 567789999999998887632 11 1111 122333333 22344444455443 255555555888777777
Q ss_pred cCCCCEEEEe--cCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cccccc-
Q 010058 163 LKPHERIMAL--DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASAYAR- 238 (519)
Q Consensus 163 l~pGD~Vl~~--~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn~g~- 238 (519)
..++..|+.- ..+ |+++.-. ..+..+|..++.+- .+..-...+++.+|.+ ++++++-. .+|||.
T Consensus 104 ~~~~EvVis~g~lV~-gg~~~v~-----d~~~~aG~~l~EvG-----~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~ 171 (395)
T COG1921 104 AEGKEVVVSRGELVE-GGAFRVP-----DIIRLAGAKLVEVG-----TTNRTHLKDYELAINE-NTALLLKVHSSNYGFT 171 (395)
T ss_pred ccCCeEEEEcccccc-CCCCChh-----HHHHHcCCEEEEec-----ccCcCCHHHHHHHhcc-CCeeEEEEeecccccc
Confidence 7755555422 112 3443221 24566776665553 2355678889999998 89888776 666774
Q ss_pred -cccHHHHHHHHhhcCCEEEehhhhhhhccc---cCCCCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcch
Q 010058 239 -LYDYARIRKVCDKQKAVMLADMAHISGLVA---AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEV 314 (519)
Q Consensus 239 -~~d~~~i~~ia~~~~~~livD~ah~~g~~~---~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~ 314 (519)
..+.+++.+||+++|+++++|.+ +|... .++.+..-.++|++++|++|.|.||++|+|++++
T Consensus 172 ~~l~~~~l~~ia~~~~lpvivD~a--Sg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkK------------ 237 (395)
T COG1921 172 GMLSEEELVEIAHEKGLPVIVDLA--SGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKK------------ 237 (395)
T ss_pred ccccHHHHHHHHHHcCCCEEEecC--CccccccccchhHHHhcCCCEEEEecchhcCCCccceEechH------------
Confidence 45678899999999999999987 33321 1111111127999999999999999999999999
Q ss_pred hhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh
Q 010058 315 MYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE 353 (519)
Q Consensus 315 ~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~ 353 (519)
++..++++... +..-...-..++++.+||+....++
T Consensus 238 --elI~~lq~~~l-~Ralrv~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 238 --ELIEKLQSHPL-KRALRVDKETLAALEAALELYLQPE 273 (395)
T ss_pred --HHHHHHHhhhh-hhhhhcCcHhHHHHHHHHHHHcCch
Confidence 66666554311 1111234567888899999877654
No 310
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.53 E-value=9.8e-12 Score=129.83 Aligned_cols=329 Identities=14% Similarity=0.051 Sum_probs=172.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~p 165 (519)
-.|.+.+++.+.+.+ . ++.....+. .. ... ...+++.+..+.+... ..+..+||+.|+..++... ...
T Consensus 58 ~~~~i~~a~~~~~~~-~--~~~~~~~~~-~~---~~~-~la~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~ 127 (425)
T PRK08088 58 LHPKVVAAVEAQLKK-L--SHTCFQVLA-YE---PYL-ELCEKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (425)
T ss_pred CCHHHHHHHHHHHhh-C--CCccccccC-CH---HHH-HHHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhC
Confidence 378889998888765 2 111110011 11 122 2336666766653311 2478899998777655543 223
Q ss_pred CCEEEEecCCCcccc-cccccccCCceeeee-----eeeEEEeeeeCCCCCCC--CHHHHHHHhh----hhCCcEEEEcc
Q 010058 166 HERIMALDLPHGGHL-SHGYQTDTKKISAVS-----IFFETMPYRLDESTGYI--DYEQLEKSAA----LFRPKLIVAGA 233 (519)
Q Consensus 166 GD~Vl~~~~~~~~~~-~~~~~~~~~~v~~~g-----~~~~~v~~~~d~~~~~i--D~d~l~~~i~----~~k~klIi~~~ 233 (519)
...|+..+..|-|.. ..............| ..+..++++.+..+... +++++++.+. ..+..+|++.+
T Consensus 128 r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Ep 207 (425)
T PRK08088 128 RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP 207 (425)
T ss_pred CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECc
Confidence 345666554432221 111000000000000 00112222222111111 1556887775 23566777774
Q ss_pred cc-c-ccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C-CCeEEEEcCCCcc-cCCCcceEEeec
Q 010058 234 SA-Y-ARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E-YADVVTTTTHKSL-RGPRGAMIFFRK 302 (519)
Q Consensus 234 sn-~-g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~-~~di~~~S~~K~l-~GprgG~i~~~~ 302 (519)
.. . |...+ +++|+++|+++|+++|+|+++. |+...+.. .++ + ..|+.++ +|++ +|.|.|++++++
T Consensus 208 i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~-~~~~~~~~~pdi~s~--sK~l~~G~rig~v~~~~ 283 (425)
T PRK08088 208 VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTL-FAMEQMGVAADLTTF--AKSIAGGFPLAGVTGRA 283 (425)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcch-hHHhhcCCCCCEEEE--eccccCCCcceeeEecH
Confidence 33 3 33233 8899999999999999999976 33222211 011 1 2455544 5887 466779999987
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----CC-
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER----GY- 377 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~- 377 (519)
++.+.+.........+ .+....++....++.... ++..+++++..+++.+.|.++ +.
T Consensus 284 --------------~~~~~~~~~~~~~t~~-~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 345 (425)
T PRK08088 284 --------------EVMDAIAPGGLGGTYA-GNPIACAAALAVLKVFEQ---ENLLQKANALGEKLKDGLLAIAEKHPEI 345 (425)
T ss_pred --------------HHHhhcCCCCCCCCCC-cCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 5555544332222223 344445555556665433 233444444444444444332 32
Q ss_pred EEecCCCCcceeeeeccCC-------CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNK-------GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~-------~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
..+. +. ..+.++.+... ......+...+.+.||.+. |+.. .++.||++++...+ ++|+++
T Consensus 346 ~~v~-g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~----~~~~---~~~~iRl~~~~~~t----~~ei~~ 412 (425)
T PRK08088 346 GDVR-GL-GAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILL----SCGP---YYNVLRILVPLTIE----DAQIRQ 412 (425)
T ss_pred EEEe-cc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEe----cCCC---CCCEEEEECCCCcC----HHHHHH
Confidence 1122 22 34556665211 1124567777778898874 3322 13679999987777 899999
Q ss_pred HHHHHHHHHHH
Q 010058 451 VAEFFDAAVKL 461 (519)
Q Consensus 451 l~~~l~~~l~~ 461 (519)
.++.|.+++..
T Consensus 413 ~i~~l~~~l~~ 423 (425)
T PRK08088 413 GLEIIAQCFDE 423 (425)
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 311
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.51 E-value=9e-12 Score=129.68 Aligned_cols=329 Identities=13% Similarity=0.127 Sum_probs=176.9
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCcHHHHHHHHHhh--cC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSLSGSPANFQVYTAL--LK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~sGs~a~~~~~~al--l~ 164 (519)
-.|.|.+|+.+.+.. . .+.....+. ++ .+....+++.+++... .+. .+..+||+.|+.+++... ..
T Consensus 57 ~~p~v~~ai~~ql~~-~--~~~~~~~~~-~~----~~~~la~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK09792 57 RHPDLVAAVEQQLQQ-F--THTAYQIVP-YE----SYVTLAEKINALAPVSGQAK---TAFFTTGAEAVENAVKIARAHT 125 (421)
T ss_pred CCHHHHHHHHHHHHh-c--cCcccCccC-CH----HHHHHHHHHHHhCCCCCCce---EEEeCChHHHHHHHHHHHHHhc
Confidence 378888888887765 2 111111111 11 1122335566665421 122 366778888888776654 22
Q ss_pred CCCEEEEecCCC-ccccccccccc-----CCceeeeeeeeEEEeeeeCCCCC--CCCHHHHHHHhhh----hCCcEEEEc
Q 010058 165 PHERIMALDLPH-GGHLSHGYQTD-----TKKISAVSIFFETMPYRLDESTG--YIDYEQLEKSAAL----FRPKLIVAG 232 (519)
Q Consensus 165 pGD~Vl~~~~~~-~~~~~~~~~~~-----~~~v~~~g~~~~~v~~~~d~~~~--~iD~d~l~~~i~~----~k~klIi~~ 232 (519)
...+|+...-.| |.+........ .......-..+..++++.+.... .-|++.+++.+.+ .++++|++.
T Consensus 126 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~E 205 (421)
T PRK09792 126 GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFE 205 (421)
T ss_pred CCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEc
Confidence 335677776443 32211111000 00000000012334444322110 0134778887752 356788888
Q ss_pred ccc--ccc-ccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC---C-CCCeEEEEcCCCccc-CCCcceEEee
Q 010058 233 ASA--YAR-LYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP---F-EYADVVTTTTHKSLR-GPRGAMIFFR 301 (519)
Q Consensus 233 ~sn--~g~-~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p---~-~~~di~~~S~~K~l~-GprgG~i~~~ 301 (519)
|.. .|. ..+ +++|+++|++||+++|+|+.+. |+-..+.. .+ + ...|++++| |+|+ |.+.|+++++
T Consensus 206 Pvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~-~a~~~~~~~pDi~t~g--K~l~~G~pigav~~~ 281 (421)
T PRK09792 206 PVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS-GFARTGKL-FAMDHYADKPDLMTMA--KSLAGGMPLSGVVGN 281 (421)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCch-hHHHhcCCCCcEEEee--hhhcCCCceEEEEEc
Confidence 543 443 235 8899999999999999999865 33222210 11 1 145777665 9884 5667999888
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCEE
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYDL 379 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~ 379 (519)
+ ++.+.+.........++ +....++..+.++.+.+. +..+++++..+++.+.|+++ .+..
T Consensus 282 ~--------------~i~~~~~~~~~~~T~~g-npl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~ 343 (421)
T PRK09792 282 A--------------NIMDAPAPGGLGGTYAG-NPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPA 343 (421)
T ss_pred H--------------HHHhccCCCCcCCCCCC-CHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7 55554433222222333 333344444566666443 34555556666666666543 2222
Q ss_pred ecCCCC-cceeeeeccCCC------CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHH
Q 010058 380 VSGGTE-NHLVLVNLRNKG------IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVA 452 (519)
Q Consensus 380 ~~~~~~-~~~~~v~~~~~~------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~ 452 (519)
+..... ..+.++.+.... .....+...+.+.||.+. +.. ...+.||+.++...+ ++|+++++
T Consensus 344 v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----~~g---~~~~~irl~P~l~i~----~~ei~~~~ 412 (421)
T PRK09792 344 IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLL----TCG---AYGNVIRFLYPLTIP----DAQFDAAM 412 (421)
T ss_pred cceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEe----ecC---CCCCEEEEeCCCcCC----HHHHHHHH
Confidence 222122 345566664321 123456667778999984 211 124689999888677 89999999
Q ss_pred HHHHHHHH
Q 010058 453 EFFDAAVK 460 (519)
Q Consensus 453 ~~l~~~l~ 460 (519)
++|.+++.
T Consensus 413 ~~l~~~l~ 420 (421)
T PRK09792 413 KILQDALS 420 (421)
T ss_pred HHHHHHHh
Confidence 99998874
No 312
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.51 E-value=1.8e-11 Score=127.83 Aligned_cols=330 Identities=15% Similarity=0.106 Sum_probs=175.0
Q ss_pred CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc---
Q 010058 87 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL--- 163 (519)
Q Consensus 87 ~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all--- 163 (519)
.-.|.|.+|+.+.+.+ . .+... +...++ .+....+++.+++....+. ....+||+.|+.+++....
T Consensus 62 h~~p~v~~ai~~ql~~-l--~~~~~-~~~~~~----~~~~la~~l~~~~p~~~~~---v~f~~sGseA~e~AlklAr~~~ 130 (442)
T PRK13360 62 HGRPEIVEAVRAQAGE-L--DYAPA-FQMGHP----KAFELANRIAEIAPGGLNH---VFFTNSGSESVDTALKIALAYH 130 (442)
T ss_pred CCCHHHHHHHHHHHHh-C--CCccc-CCcCCH----HHHHHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 3478899999888764 2 11111 101112 2223336677776322222 2566778888887766432
Q ss_pred ----CC-CCEEEEecCCCccc-cccccccc----CCceeeeeeeeEEEeeeeCCCC--CC--------CCHHHHHHHhhh
Q 010058 164 ----KP-HERIMALDLPHGGH-LSHGYQTD----TKKISAVSIFFETMPYRLDEST--GY--------IDYEQLEKSAAL 223 (519)
Q Consensus 164 ----~p-GD~Vl~~~~~~~~~-~~~~~~~~----~~~v~~~g~~~~~v~~~~d~~~--~~--------iD~d~l~~~i~~ 223 (519)
++ ..+|+.....|-|. +....... .....-....+..+|++.+... +. -..+++++.+..
T Consensus 131 ~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 210 (442)
T PRK13360 131 RARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTL 210 (442)
T ss_pred HhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHh
Confidence 12 35788776443222 11000000 0000000001122333211000 10 024577777753
Q ss_pred ---hCCcEEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhh-hhccccCCCCCCCC-CCeEEEEcCCCcccC
Q 010058 224 ---FRPKLIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSLRG 292 (519)
Q Consensus 224 ---~k~klIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~~~~~~p~~-~~di~~~S~~K~l~G 292 (519)
.++.+|++.+ ++.|...+ +++|+++|++||+++|+|++|. .|-........-++ ..|+++++ |+|+|
T Consensus 211 ~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~g--K~l~g 288 (442)
T PRK13360 211 HDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCA--KGLTN 288 (442)
T ss_pred cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeee--ecccc
Confidence 2455676663 33455556 9999999999999999999984 22211110000011 35888775 99864
Q ss_pred C--CcceEEeecccccccccCcchhhhHHHHhhhc------c-cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Q 010058 293 P--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------V-FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLS 363 (519)
Q Consensus 293 p--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~ 363 (519)
. ..|.+++++ ++.+.+... . ..+..+ .+....++..++++.+.+. .+.++..+
T Consensus 289 G~~P~gav~~~~--------------~i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L~~l~~~---~l~~~~~~ 350 (442)
T PRK13360 289 GAIPMGAVFVSS--------------EIHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATLDLYERE---GLLTRAAR 350 (442)
T ss_pred CccceEEEEEcH--------------HHHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHH
Confidence 2 345566666 444433221 1 122223 3455556666677776543 35677788
Q ss_pred HHHHHHHHHHhc-CCEEecCCCCc-ceeeeeccCC--C--CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCc
Q 010058 364 NSSKFARSLLER-GYDLVSGGTEN-HLVLVNLRNK--G--IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPA 437 (519)
Q Consensus 364 ~~~~l~~~L~~~-g~~~~~~~~~~-~~~~v~~~~~--~--~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~ 437 (519)
+.++|.+.|+++ .+..+.+-... -+.-+.+.+. + .....+...|.+.||.+.. . .+.+||+++.
T Consensus 351 ~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~----~------~~~lr~~Ppl 420 (442)
T PRK13360 351 LAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRY----T------GDILALSPPL 420 (442)
T ss_pred HHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEe----c------CCEEEEeCCC
Confidence 888888888765 23222210111 1112233221 1 1234566677789999862 1 2469999998
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHH
Q 010058 438 LTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 438 ~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
..| ++|++++++.|.++++.
T Consensus 421 ~~t----~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 421 IIE----EAQIDELFDILAQALKE 440 (442)
T ss_pred ccC----HHHHHHHHHHHHHHHHH
Confidence 888 99999999999998864
No 313
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.50 E-value=1.7e-11 Score=128.44 Aligned_cols=322 Identities=13% Similarity=0.097 Sum_probs=178.0
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc--C-
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL--K- 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all--~- 164 (519)
-.|.|.+|+.+.+.. . .+. .+++. .+ ......+++.+++..+.+. .....||+.|+.+++.... .
T Consensus 99 ~~p~v~~Ai~~ql~~-l--~~~-~~~~~-~~----~~~~lae~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~t~ 166 (459)
T PRK11522 99 RNPVVVSAVQNQLAK-Q--PLH-SQELL-DP----LRAMLAKTLAALTPGKLKY---SFFCNSGTESVEAALKLAKAYQS 166 (459)
T ss_pred CCHHHHHHHHHHHhh-C--ccc-ccccC-CH----HHHHHHHHHHHhCCCCCCE---EEEeCCchHHHHHHHHHHHHHhc
Confidence 479999999988765 2 111 11221 12 2223336666766433222 2555678888887777431 1
Q ss_pred -CC-CEEEEecCCC-cccccccccccCCceeeeeeeeEEEee-eeCCCCC---CCCHHHHHHHhhh-----hCCcEEEEc
Q 010058 165 -PH-ERIMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPY-RLDESTG---YIDYEQLEKSAAL-----FRPKLIVAG 232 (519)
Q Consensus 165 -pG-D~Vl~~~~~~-~~~~~~~~~~~~~~v~~~g~~~~~v~~-~~d~~~~---~iD~d~l~~~i~~-----~k~klIi~~ 232 (519)
+| .+|+.....| |.+... +.+.+......++ +..+... .-|.+++++.+.. .++.+|++.
T Consensus 167 ~~gr~~ii~~~~~yHG~t~~~--------ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvE 238 (459)
T PRK11522 167 PRGKFTFIATSGAFHGKSLGA--------LSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILE 238 (459)
T ss_pred cCCCcEEEEecCCCCCCcHHH--------hhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEe
Confidence 22 3577665332 222111 1111110000000 0000000 1267888887753 234566666
Q ss_pred --ccccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccCC--CcceEEee
Q 010058 233 --ASAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRGP--RGAMIFFR 301 (519)
Q Consensus 233 --~sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~Gp--rgG~i~~~ 301 (519)
.++-|...+ +++++++|++||+++|+|++|. |+-..|.. ..-++ ..|+++++ |.|+|. ..|.++++
T Consensus 239 pv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~g--K~lggG~~Pigav~~~ 315 (459)
T PRK11522 239 PIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDILCLA--KALGGGVMPIGATIAT 315 (459)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEEEec--hhhhCCCccceeEEEc
Confidence 333455555 8999999999999999999984 43222210 00001 35888765 998753 34555555
Q ss_pred cccccccccCcchhhhHHHHhhhc--ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CC
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQA--VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GY 377 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~ 377 (519)
+ ++.+.+... .+....++ +....++..++++.+.++ ...+++.++.++|.+.|+++ .+
T Consensus 316 ~--------------~i~~~~~~~~~~~~~T~~g-np~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~ 377 (459)
T PRK11522 316 E--------------EVFSVLFDNPFLHTTTFGG-NPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREY 377 (459)
T ss_pred H--------------HHHHHhccCCcccCCCCCC-CHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5 444433211 11122222 444555555677777653 35678888888888888776 23
Q ss_pred E-EecCC-CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 378 D-LVSGG-TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 378 ~-~~~~~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
. ++..- ....+.-+.+.... ....+.+.|.+.||.+.. .. ...+.+|+.++...+ ++|++++++.|
T Consensus 378 ~~~i~~VrG~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~----~~---~~~~~lr~~Ppl~~t----~~~id~~l~~l 445 (459)
T PRK11522 378 PDLVQEARGKGMLMAIEFVDNE-IGYNFASEMFRQRVLVAG----TL---NNAKTIRIEPPLTLT----IEQCEQVLKAA 445 (459)
T ss_pred CCceeeEEeceeEEEEEecCch-HHHHHHHHHHHCCeEEEe----cC---CCCCEEEEECCccCC----HHHHHHHHHHH
Confidence 3 22210 11233444443321 245577778789999862 11 124689999998888 89999999999
Q ss_pred HHHHHHH
Q 010058 456 DAAVKLA 462 (519)
Q Consensus 456 ~~~l~~~ 462 (519)
.+++...
T Consensus 446 ~~~l~~~ 452 (459)
T PRK11522 446 RKALAAM 452 (459)
T ss_pred HHHHHHH
Confidence 9998754
No 314
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.50 E-value=6.8e-12 Score=130.94 Aligned_cols=330 Identities=15% Similarity=0.124 Sum_probs=178.5
Q ss_pred cCeeecCCC--C---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~e--n---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+. . ..+|.|.+++.+.+.+.. . ++...+... ...+++.+++. ..+. -..+.||
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~-----~~~~~~~~~----~la~~L~~~~~-~~~~---v~~~~sG 115 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--S-----FGAPTELEV----ELAELVIELVP-SIEM---VRMVNSG 115 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--c-----CCCCCHHHH----HHHHHHHHhCC-CCCE---EEEecCH
Confidence 456666542 1 458899999998887621 1 112222222 23366666653 1222 2455666
Q ss_pred HHHHHHHHHhhc--CCCCEEEEecCCCccccc-ccccccCCce----eeeeeeeEEE---eeeeCCCCCCCCHHHHHHHh
Q 010058 152 SPANFQVYTALL--KPHERIMALDLPHGGHLS-HGYQTDTKKI----SAVSIFFETM---PYRLDESTGYIDYEQLEKSA 221 (519)
Q Consensus 152 s~a~~~~~~all--~pGD~Vl~~~~~~~~~~~-~~~~~~~~~v----~~~g~~~~~v---~~~~d~~~~~iD~d~l~~~i 221 (519)
+.|+..++.... ..+++|+..+..+-|+.. .......... ...+.....+ .+.. ..-|++++++.+
T Consensus 116 seA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~l~~~i 191 (426)
T PRK00062 116 TEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA----PYNDLEAVEELF 191 (426)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc----CCCCHHHHHHHH
Confidence 779998888653 336788887765544320 0000000000 0000000000 0011 113788998887
Q ss_pred hh--hCCcEEEEc--ccccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-CCCCC-CCeEEEEcCCCccc
Q 010058 222 AL--FRPKLIVAG--ASAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-PSPFE-YADVVTTTTHKSLR 291 (519)
Q Consensus 222 ~~--~k~klIi~~--~sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~~p~~-~~di~~~S~~K~l~ 291 (519)
.. .++.+|++. +++.|...+ +++|+++|++||+++|+|++|. |+...+.. ..-++ ..|+++ ++|.++
T Consensus 192 ~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi~~--~gK~l~ 268 (426)
T PRK00062 192 EEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDLTT--LGKIIG 268 (426)
T ss_pred HhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcchHh--hhhHhh
Confidence 53 256677777 555676666 8999999999999999999986 54221110 00011 246654 459884
Q ss_pred -CCCcceEEeecccccccccCcchhhhHHHHhhh--cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH
Q 010058 292 -GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ--AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKF 368 (519)
Q Consensus 292 -GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~--~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l 368 (519)
|++.|++++++ ++.+.+.. ..+.+...+.+....++..++++.+... +..+++.++.+++
T Consensus 269 ~G~p~ga~~~~~--------------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~ 331 (426)
T PRK00062 269 GGLPVGAFGGRR--------------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRL 331 (426)
T ss_pred CCCcceeeeEHH--------------HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHH
Confidence 55678888877 55555531 1111111133444555556677776543 3455666666666
Q ss_pred HHHHHh----cCCEEecCCCCcceeeeeccCCCC---------c---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEE
Q 010058 369 ARSLLE----RGYDLVSGGTENHLVLVNLRNKGI---------D---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432 (519)
Q Consensus 369 ~~~L~~----~g~~~~~~~~~~~~~~v~~~~~~~---------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 432 (519)
.+.|++ .++..-..+. ..+.-+.+.+... + ...+...|.++||.+. |.. .+.++
T Consensus 332 ~~~l~~~~~~~~~~~~vrg~-G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~----~~~-----~~~~~ 401 (426)
T PRK00062 332 AEGLKEAAKKAGIPLTVNRV-GSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLA----PSQ-----FEAGF 401 (426)
T ss_pred HHHHHHHHHHcCCceEEEEe-cceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEee----cCC-----cCcee
Confidence 666654 3543311111 2233333322110 1 2457777888999986 221 12356
Q ss_pred eccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+. ...+ ++|++++++.|.+++..
T Consensus 402 ~~--~~~t----~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 402 VS--AAHT----DEDIEKTLEAARKAFAA 424 (426)
T ss_pred ee--ccCC----HHHHHHHHHHHHHHHHh
Confidence 54 3444 89999999999998863
No 315
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.49 E-value=1.2e-11 Score=128.73 Aligned_cols=319 Identities=14% Similarity=0.112 Sum_probs=174.5
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh---c-
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL---L- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al---l- 163 (519)
-.|.|.+|+.+.+.+-. +. .+++. .+. .....+++.+++....+. ....+||+.|+.+++... .
T Consensus 92 ~hp~v~~Av~~ql~~l~---~~-~~~~~-~~~----~~~lAe~L~~~~p~~~~~---v~f~~SGsEA~e~AlklAr~~t~ 159 (442)
T TIGR03372 92 RNPNVIAAVENQLAKQP---LH-SQELL-DPL----RALLAKTLAALTPGKLKY---SFFCNSGTESVEAALKLAKAYQS 159 (442)
T ss_pred CCHHHHHHHHHHHHhCC---Cc-ccccC-CHH----HHHHHHHHHHhCCCCcCE---EEEeCCchHHHHHHHHHHHHHHh
Confidence 47999999998876521 11 12221 222 223336676776543321 255678888888777643 1
Q ss_pred -CCCCEEEEecCCC-cccccccccccCCcee--e--eeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-----hCCcEEEEc
Q 010058 164 -KPHERIMALDLPH-GGHLSHGYQTDTKKIS--A--VSIFFETMPYRLDESTGYIDYEQLEKSAAL-----FRPKLIVAG 232 (519)
Q Consensus 164 -~pGD~Vl~~~~~~-~~~~~~~~~~~~~~v~--~--~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~-----~k~klIi~~ 232 (519)
+...+|+.....| |.+............. + ....+..+|+ -|.+++++.+.+ .+..+|++.
T Consensus 160 ~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~--------~d~~~~~~~l~~~~~~~~~vAavIvE 231 (442)
T TIGR03372 160 PRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF--------GDIEAMLKALNECKKTGDDVAAIILE 231 (442)
T ss_pred hcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC--------CCHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 1235677776433 3221111100000000 0 0000112221 256777766642 245677766
Q ss_pred c--cccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccCC--CcceEEee
Q 010058 233 A--SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRGP--RGAMIFFR 301 (519)
Q Consensus 233 ~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~Gp--rgG~i~~~ 301 (519)
+ ++-|...+ +++++++|++||+++|+|++|. |+-..|.. -.-++ ..|+++++ |.|+|. ..|.++++
T Consensus 232 pv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~g--K~lg~G~~Pigavv~~ 308 (442)
T TIGR03372 232 PIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILCLA--KALGGGVMPIGATIAT 308 (442)
T ss_pred CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeeeeh--hhhcCCcccceEEEec
Confidence 3 33455555 8999999999999999999984 43222210 00001 35888865 998653 35666676
Q ss_pred cccccccccCcchhhhHHHHhhhc--ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CC
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQA--VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GY 377 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~ 377 (519)
+ ++.+.+... .+....++ +....++..++|+.+.++ ...++..+.-++|.+.|+++ .+
T Consensus 309 ~--------------~i~~~~~~~~~~~~~T~~g-np~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~ 370 (442)
T TIGR03372 309 E--------------AVFSVLFDNPFLHTTTFGG-NPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEY 370 (442)
T ss_pred H--------------HHHHhhhccCccccCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6 454443211 11122222 444455555567766543 34566777777787777765 22
Q ss_pred E-EecC-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 378 D-LVSG-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 378 ~-~~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
. .+.. .....+.-+.+... .....+.+.|.+.||.+... .+ .++.+||.++...| ++|+++++++|
T Consensus 371 ~~~i~~vRG~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~-~~------~~~~lr~~Ppl~~t----~~~id~~~~~l 438 (442)
T TIGR03372 371 PDLIIEARGKGLLMAIEFRDN-EIGYAFAKELFQQNILVAGT-LN------NAKSIRIEPPLTIT----IEQCALVIKAA 438 (442)
T ss_pred CCceEEEecceEEEEEEeCCh-HHHHHHHHHHHHCCcEEeec-CC------CCCEEEEECCcccC----HHHHHHHHHHH
Confidence 2 2211 01123444444322 12456777888899998621 01 13579999998888 89999999999
Q ss_pred HHHH
Q 010058 456 DAAV 459 (519)
Q Consensus 456 ~~~l 459 (519)
++++
T Consensus 439 ~~~~ 442 (442)
T TIGR03372 439 KDAL 442 (442)
T ss_pred HHhC
Confidence 8763
No 316
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=1.4e-11 Score=129.23 Aligned_cols=327 Identities=13% Similarity=0.091 Sum_probs=175.9
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCcceEEeCCcHHHHHHHHHhh--cC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDP-AKWGVNVQSLSGSPANFQVYTAL--LK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~-~~~~~~V~~~sGs~a~~~~~~al--l~ 164 (519)
-.|.|.+|+.+.+.+ . .+... ....+ +......+++.+.+.... +. .+.++||+.|+.+++... ..
T Consensus 73 ~~p~v~~ai~~q~~~-~--~~~~~-~~~~~----~~~~~la~~l~~~~p~~~~~~---v~f~~sGseA~e~AlklAr~~t 141 (443)
T PRK06058 73 SAPRVVEAVREQVAR-F--THTCF-MVTPY----EGYVAVAEQLNRLTPGDHEKR---SALFNSGAEAVENAVKIARSYT 141 (443)
T ss_pred CCHHHHHHHHHHHHh-c--cCccc-cccCC----HHHHHHHHHHHHhCCCCCCCE---EEEeCCcHHHHHHHHHHHHHhh
Confidence 478999999988765 2 11110 00111 222233467777775321 22 367788988888777732 23
Q ss_pred CCCEEEEecCCCcccc-ccccccc-----CCcee--eeeeeeEEEee--eeCC-CCCCC--------CHHHHHHHhhhhC
Q 010058 165 PHERIMALDLPHGGHL-SHGYQTD-----TKKIS--AVSIFFETMPY--RLDE-STGYI--------DYEQLEKSAALFR 225 (519)
Q Consensus 165 pGD~Vl~~~~~~~~~~-~~~~~~~-----~~~v~--~~g~~~~~v~~--~~d~-~~~~i--------D~d~l~~~i~~~k 225 (519)
..++|+..+..|-|.. ....... ..... ..+ ...+++ +.+. ..... ..+.+++.+...+
T Consensus 142 gr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 219 (443)
T PRK06058 142 GRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPE--VYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADN 219 (443)
T ss_pred CCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCC--ceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCc
Confidence 3478887765432221 1000000 00000 001 111221 1110 00111 1223334333236
Q ss_pred CcEEEEcccc-c-cccc----cHHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCCccc-CCCc
Q 010058 226 PKLIVAGASA-Y-ARLY----DYARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSLR-GPRG 295 (519)
Q Consensus 226 ~klIi~~~sn-~-g~~~----d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K~l~-Gprg 295 (519)
+.+|++.|.. . |... -+++|+++|++||+++|+|+.+. |+...+..- .-++ ..|+++++ |.++ |.+.
T Consensus 220 iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~Pi 296 (443)
T PRK06058 220 LAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTA--KGIAGGLPL 296 (443)
T ss_pred eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEc--ccccCCCcc
Confidence 7788877443 2 3222 38999999999999999999975 432222100 0001 35899886 8884 5556
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
|++++++ ++.+.+......+.. +.+....++..++++.+.+. ...+++.+..++|.+.|+++
T Consensus 297 ~av~~~~--------------~i~~~~~~~~~~~T~-~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l 358 (443)
T PRK06058 297 SAVTGRA--------------EIMDAPHPGGLGGTY-GGNPVACAAALAAIETIEED---DLVARARQIEALMTDRLRAL 358 (443)
T ss_pred EEEEEcH--------------HHHhhccCCCCCCCC-CCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHH
Confidence 8888887 555544332222222 33444455555667665433 45677777788888888774
Q ss_pred --CCEEecC--CCCcceeeeeccCC--CC-c---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCH
Q 010058 376 --GYDLVSG--GTENHLVLVNLRNK--GI-D---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVE 445 (519)
Q Consensus 376 --g~~~~~~--~~~~~~~~v~~~~~--~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~ 445 (519)
...++.. +. ..+..+.+... .. + ...+.+.|.+.||.+. |+.. .++.||+.++...+ +
T Consensus 359 ~~~~~~i~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~----~~~~---~~~~lr~~Ppl~~t----~ 426 (443)
T PRK06058 359 AAEDDRIGDVRGR-GAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVL----TCGT---YGNVIRLLPPLVIG----D 426 (443)
T ss_pred HhhCCcEEeeecc-ceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEe----ccCC---CCCEEEEECCCccC----H
Confidence 2333221 22 22333444221 11 1 2335556668999986 3221 13579999888888 9
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 446 EDFEKVAEFFDAAVK 460 (519)
Q Consensus 446 ~di~~l~~~l~~~l~ 460 (519)
+|++++++.|+++++
T Consensus 427 ~~i~~~~~~l~~~l~ 441 (443)
T PRK06058 427 ELLREGLDVLEAALA 441 (443)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999885
No 317
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.48 E-value=3.6e-11 Score=125.73 Aligned_cols=213 Identities=15% Similarity=0.187 Sum_probs=129.2
Q ss_pred HHHHHHHhhhh---CCcEEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeE
Q 010058 214 YEQLEKSAALF---RPKLIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADV 281 (519)
Q Consensus 214 ~d~l~~~i~~~---k~klIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di 281 (519)
.+++++.+... +..+|++.+ ++.|...+ +++++++|++||+++|+|++|. |+-..|.. ..-++ ..|+
T Consensus 204 ~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~~~~~~gv~PDi 282 (445)
T PRK09221 204 ADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAAFAAERFGVTPDI 282 (445)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCCcCchhhHHHhcCCCCCE
Confidence 35677776532 456777763 33566666 8999999999999999999985 32111110 00001 3488
Q ss_pred EEEcCCCcccC--CCcceEEeecccccccccCcchhhhHHHHhhhc------c-cCCCCCCccHHHHHHHHHHHHHhcCH
Q 010058 282 VTTTTHKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------V-FPGLQGGPHNHTISGLAVALKQVKTP 352 (519)
Q Consensus 282 ~~~S~~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~-~~~~~g~~~~~~iaal~~al~~~~~~ 352 (519)
++++ |.|+| ...|.+++++ ++.+.+... . .....++ +....++..++++.+.+.
T Consensus 283 ~~~g--K~l~gG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~~~~T~~~-~pl~~aaa~a~L~~i~~~ 345 (445)
T PRK09221 283 ITFA--KGLTNGAIPMGAVIASD--------------EIYDAFMQGPEYAIEFFHGYTYSA-HPVACAAGLATLDIYREE 345 (445)
T ss_pred EEec--cccccCcccceeeEEcH--------------HHHHhhccCcccccccccccCCCc-CHHHHHHHHHHHHHHHhc
Confidence 8877 88754 3457777776 444433211 1 1122333 333444444667766543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCC-cceeeeeccCC----CCcHHHHHHhhcccCeEEcccccCCCCCCC
Q 010058 353 EYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTE-NHLVLVNLRNK----GIDGSRVEKVLESVHIAANKNTVPGDVSAM 426 (519)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~v~~~~~----~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~ 426 (519)
...+++.++.++|.+.|+++ ++..+.+-.. .-+..+.+... ......+.+.|.+.||.++. +
T Consensus 346 ---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----~----- 413 (445)
T PRK09221 346 ---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRY----T----- 413 (445)
T ss_pred ---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEee----c-----
Confidence 35778888888888888876 3332222111 11222333221 11234567778889999862 1
Q ss_pred CCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 427 VPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 427 ~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+.+||+++...| ++|++++++.|++++..
T Consensus 414 -~~~lr~~Ppl~~t----~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 414 -GDTIALSPPLIIE----KAQIDELVDALGDALRA 443 (445)
T ss_pred -CCEEEEECCccCC----HHHHHHHHHHHHHHHHh
Confidence 2579999988888 99999999999998863
No 318
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=4.5e-11 Score=124.38 Aligned_cols=330 Identities=16% Similarity=0.129 Sum_probs=177.6
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-CCCcceEEeCCcHHHHHHHHHhh--cC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDP-AKWGVNVQSLSGSPANFQVYTAL--LK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~-~~~~~~V~~~sGs~a~~~~~~al--l~ 164 (519)
-.|.|.+|+.+.+.. . .+.....+. .+ ......+++.+.+.-.. +. -...+||+.|+.+++... ..
T Consensus 57 ~~p~v~~ai~~ql~~-l--~~~~~~~~~-~~----~~~~la~~l~~~~p~~~~~~---v~f~~SGseA~e~AlklAr~~t 125 (425)
T PRK07495 57 RHPRVIAAVKAQLDR-F--THTCHQVVP-YE----NYVRLAERLNALVPGDFAKK---TIFVTTGAEAVENAVKIARAAT 125 (425)
T ss_pred CCHHHHHHHHHHHhh-c--cCcccCccC-CH----HHHHHHHHHHHhCCCCCCCE---EEECCchHHHHHHHHHHHHHhh
Confidence 477888888887765 2 111110111 11 12223366767765321 22 256677888888777643 23
Q ss_pred CCCEEEEecCCC-cccccccccc-----cCCceeeeeeeeEEEeeeeCCCCCC--CCHHHHHHHhhh----hCCcEEEEc
Q 010058 165 PHERIMALDLPH-GGHLSHGYQT-----DTKKISAVSIFFETMPYRLDESTGY--IDYEQLEKSAAL----FRPKLIVAG 232 (519)
Q Consensus 165 pGD~Vl~~~~~~-~~~~~~~~~~-----~~~~v~~~g~~~~~v~~~~d~~~~~--iD~d~l~~~i~~----~k~klIi~~ 232 (519)
...+|+...-.| |.+....... ......-.-..+..++++.+..... -+++++++.+.. .++.+|++.
T Consensus 126 gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~E 205 (425)
T PRK07495 126 GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIE 205 (425)
T ss_pred CCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEC
Confidence 345677766443 2221100000 0000000001123344432211100 124555666542 357788887
Q ss_pred ccc--cccc----ccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCccc-CCCcceEEeec
Q 010058 233 ASA--YARL----YDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLR-GPRGAMIFFRK 302 (519)
Q Consensus 233 ~sn--~g~~----~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~-GprgG~i~~~~ 302 (519)
|.. .|.. .-+++|+++|++||+++|+|++|. |+-..+.. ...++ ..|++++| |.|+ |.+.|++++++
T Consensus 206 Pv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~tls--K~l~~G~pigav~~~~ 282 (425)
T PRK07495 206 PVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLTTMA--KGLAGGFPLAAVTGRA 282 (425)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEEeeh--hhhcCCccceEEEEcH
Confidence 433 3422 237899999999999999999975 44333211 00111 35777775 8884 45678899887
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCEEe
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYDLV 380 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 380 (519)
++.+.+.........++ +....++..++++.+... .+.+++.+..++|.+.|+++ .+..+
T Consensus 283 --------------~i~~~~~~~~~~~T~~~-~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i 344 (425)
T PRK07495 283 --------------EIMDAPGPGGLGGTYGG-NPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEI 344 (425)
T ss_pred --------------HHHhccCCCCcCCCCCC-CHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 55554433222222333 344444445667766543 35566667777777777654 22222
Q ss_pred cC--CCCcceeeeeccCCC---Cc---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHH
Q 010058 381 SG--GTENHLVLVNLRNKG---ID---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVA 452 (519)
Q Consensus 381 ~~--~~~~~~~~v~~~~~~---~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~ 452 (519)
.. +. ..+.++.+.... .+ ...+.+.+.+.|+.+... +. ..+.|||.++...+ ++|+++++
T Consensus 345 ~~vrG~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g~----~~~~~r~~Ppl~it----~~~id~~~ 412 (425)
T PRK07495 345 ADIRGP-GFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---GV----HGNVIRFLAPITIQ----DDVFAEAL 412 (425)
T ss_pred eeeecC-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---CC----CCCEEEEeCCCccC----HHHHHHHH
Confidence 21 22 345556553321 01 234666677899998521 11 13679999988888 99999999
Q ss_pred HHHHHHHHH
Q 010058 453 EFFDAAVKL 461 (519)
Q Consensus 453 ~~l~~~l~~ 461 (519)
+.|++++..
T Consensus 413 ~~l~~~l~~ 421 (425)
T PRK07495 413 DILEASILE 421 (425)
T ss_pred HHHHHHHHH
Confidence 999999864
No 319
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.48 E-value=2.8e-11 Score=125.75 Aligned_cols=326 Identities=13% Similarity=0.079 Sum_probs=177.0
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+|+.+.+..-. +.....+ .++. .....+++.+++....+. -....||+.|+.+++....
T Consensus 60 ~~p~i~~Ai~~q~~~~~---~~~~~~~-~~~~----~~~la~~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~~~ 128 (428)
T PRK07986 60 NHPQLNAAMKSQIDAMS---HVMFGGI-THPP----AIELCRKLVAMTPQPLEC---VFLADSGSVAVEVAMKMALQYWQ 128 (428)
T ss_pred CCHHHHHHHHHHHhhcC---Ccccccc-CCHH----HHHHHHHHHhhCCCCcCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 36889999988776521 1110001 1121 222336666666532222 2556788888887776432
Q ss_pred ---CCCCEEEEecCCC-cccccccccccCCc-e--eeeee--eeEEEeeeeCC--CCC-CCCHHHHHHHhhhh--CCcEE
Q 010058 164 ---KPHERIMALDLPH-GGHLSHGYQTDTKK-I--SAVSI--FFETMPYRLDE--STG-YIDYEQLEKSAALF--RPKLI 229 (519)
Q Consensus 164 ---~pGD~Vl~~~~~~-~~~~~~~~~~~~~~-v--~~~g~--~~~~v~~~~d~--~~~-~iD~d~l~~~i~~~--k~klI 229 (519)
....+|+.....| |.+........... . .+.+. .+..++++... +.+ .-|++++++.+... +..+|
T Consensus 129 ~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaav 208 (428)
T PRK07986 129 AKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAV 208 (428)
T ss_pred hcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEE
Confidence 2346788776443 22211111000000 0 00000 01122222110 000 12567788777532 34566
Q ss_pred EEcc--ccc-cc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccCC--Ccce
Q 010058 230 VAGA--SAY-AR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRGP--RGAM 297 (519)
Q Consensus 230 i~~~--sn~-g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~Gp--rgG~ 297 (519)
++.+ ... |. ...+++|+++|++||+++|+|++| .|+-..|.. ..-++ ..|+++++ |.|+|. ..|.
T Consensus 209 i~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t~g--K~l~gG~~p~~a 285 (428)
T PRK07986 209 ILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILCLG--KALTGGTMTLSA 285 (428)
T ss_pred EEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEEec--hhhhCCcccCcc
Confidence 6654 233 32 234899999999999999999998 554222210 00011 35888754 988543 3355
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcc-----cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAV-----FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-----~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
+++++ ++.+.+.... ....++ .+....++..++++.+.+. .+.+++.++.++|.+.|
T Consensus 286 v~~~~--------------~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l 347 (428)
T PRK07986 286 TLTTR--------------EVAETISNGEAGCFMHGPTFM-GNPLACAVANASLSLLESG---DWQQQVAAIEAQLREEL 347 (428)
T ss_pred hhchH--------------HHHHHhhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHH
Confidence 56666 4554443211 112222 3455555555667766543 34777888888888888
Q ss_pred Hhc-CCEEecCCC-CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 373 LER-GYDLVSGGT-ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 373 ~~~-g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
+++ ....+..-. ...+..+.+... .....+.+.|.+.||.+. |. .+.||+.++...| ++|+++
T Consensus 348 ~~l~~~~~i~~vRg~Gl~~~ve~~~~-~~~~~~~~~l~~~Gl~~~----~~------g~~i~~~Ppl~it----~~ei~~ 412 (428)
T PRK07986 348 APLRDAPMVADVRVLGAIGVVETTRP-VNMAALQRFFVEQGVWIR----PF------GKLIYLMPPYIIL----PEQLQR 412 (428)
T ss_pred HHHhcCCCEEeEeccceEEEEEeCCc-ccHHHHHHHHHHCCcEEE----ec------CCEEEEeCCCCCC----HHHHHH
Confidence 775 333232200 122333444322 235567888888999986 21 2479999998888 899999
Q ss_pred HHHHHHHHHH
Q 010058 451 VAEFFDAAVK 460 (519)
Q Consensus 451 l~~~l~~~l~ 460 (519)
++++|.+++.
T Consensus 413 ~~~~l~~~l~ 422 (428)
T PRK07986 413 LTAAVNRAVQ 422 (428)
T ss_pred HHHHHHHHHh
Confidence 9999999985
No 320
>PRK06541 hypothetical protein; Provisional
Probab=99.47 E-value=2.2e-11 Score=127.83 Aligned_cols=218 Identities=12% Similarity=0.198 Sum_probs=127.4
Q ss_pred HHHHHHHhhh---hCCcEEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhh-hhccccCCCCCCCC-CCeEE
Q 010058 214 YEQLEKSAAL---FRPKLIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAAGVIPSPFE-YADVV 282 (519)
Q Consensus 214 ~d~l~~~i~~---~k~klIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~~~~~~p~~-~~di~ 282 (519)
++.+++.+.. .++.+|++.| ++.|...+ +++|+++|++||+++|+|++|. .|-........-++ ..|++
T Consensus 207 ~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDiv 286 (460)
T PRK06541 207 ADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDII 286 (460)
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEE
Confidence 3667777753 2345666654 22455555 8999999999999999999983 33211110000001 35888
Q ss_pred EEcCCCcccC-C-CcceEEeecccccccccCcchhhhHHHHhhhc--cc-CCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 283 TTTTHKSLRG-P-RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--VF-PGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 283 ~~S~~K~l~G-p-rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~-~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
+++ |.|+| . +.|.+++++ ++.+.+... .+ .+...+.+....++..+.++.+... ..
T Consensus 287 t~g--K~l~~G~~pigav~~~~--------------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~---~~ 347 (460)
T PRK06541 287 TCA--KGITSGYSPLGAMIASD--------------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFERE---GL 347 (460)
T ss_pred Eec--ccccCCccceeEEEEcH--------------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc---cH
Confidence 765 98864 3 467777776 444443321 11 1111222334444444556655432 45
Q ss_pred HHHHHHHHHHHHHHHHhc-CCEEecCC-CCcceeeeeccCC-----CCcH--------HHHHHhhcccCeEEcccccCCC
Q 010058 358 QEQVLSNSSKFARSLLER-GYDLVSGG-TENHLVLVNLRNK-----GIDG--------SRVEKVLESVHIAANKNTVPGD 422 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~v~~~~~-----~~~~--------~~~~~~L~~~gI~v~~~~~p~~ 422 (519)
.+++.++.++|.+.|+++ ...++..- ....+.-+.+... ..+. ..+.+.|.+.||.+. +.
T Consensus 348 ~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~- 422 (460)
T PRK06541 348 LDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCR----AD- 422 (460)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEE----ec-
Confidence 678888899999988876 33222110 1122333443211 0110 235566778999996 21
Q ss_pred CCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 423 VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 423 ~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+.+...|||+++...| ++|+++++++|.+++..
T Consensus 423 --~~g~~~lrl~Ppl~~t----~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 423 --DRGDPVVQLAPPLISG----QEEFDEIEQILRSVLTE 455 (460)
T ss_pred --CCCCCEEEEECCCCCC----HHHHHHHHHHHHHHHHH
Confidence 1123679999998888 99999999999999864
No 321
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.47 E-value=5.8e-12 Score=138.79 Aligned_cols=291 Identities=14% Similarity=0.121 Sum_probs=184.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-cC--CCCEEEEecCCCcccccccccccCCceeee
Q 010058 119 YIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-LK--PHERIMALDLPHGGHLSHGYQTDTKKISAV 194 (519)
Q Consensus 119 ~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-l~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~ 194 (519)
+.-+.--..+..++++.|.+. +|..+..+++ +..+++++. .. ++++|++++..|+....... + .....
T Consensus 106 G~Le~l~e~Qt~i~eLtGm~~----aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~-t---~a~~~ 177 (939)
T TIGR00461 106 GRLEALLNFQTVVSDLTGLPV----ANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLH-T---RAKPF 177 (939)
T ss_pred HHHHHHHHHHHHHHHHHCCCh----hhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHH-H---HHHhc
Confidence 333333446789999999997 4667777776 444455564 33 34899999887766543221 0 01122
Q ss_pred eeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 195 SIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 195 g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
|..++. +|++++++.+ ++..+++..+| +|...|+++|.++++++|++++++.-..+..+ ..
T Consensus 178 g~~v~~-----------~~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~l----l~ 239 (939)
T TIGR00461 178 GIEVIV-----------VDCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTL----LT 239 (939)
T ss_pred CcEEEE-----------EcHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCC----cC
Confidence 322222 2455666544 35667676545 89999999999999999999999654333222 22
Q ss_pred CCCC-CCeEEEEcCCCc-----ccCCCcceEEeeccc-cccc--ccCcc------hhhhH-----HHHhhhcccCCCCCC
Q 010058 274 SPFE-YADVVTTTTHKS-----LRGPRGAMIFFRKGV-KEIN--KQGQE------VMYAY-----EDKINQAVFPGLQGG 333 (519)
Q Consensus 274 ~p~~-~~di~~~S~~K~-----l~GprgG~i~~~~~~-~~~~--~~g~~------~~~~~-----~~~i~~~~~~~~~g~ 333 (519)
.|-+ ++||++++.+++ ++||..|++.+++.+ +..| +.|.+ ..|.+ .+.|.+. .++
T Consensus 240 ~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRe-----kAt 314 (939)
T TIGR00461 240 PPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRD-----KAT 314 (939)
T ss_pred CHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeeccccccccccc-----ccC
Confidence 2222 799998777664 347777999999875 2233 33311 11111 1111111 123
Q ss_pred cc---HHHHHHHHHH--HHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhc
Q 010058 334 PH---NHTISGLAVA--LKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE 408 (519)
Q Consensus 334 ~~---~~~iaal~~a--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~ 408 (519)
.| .+.+.|+.++ +..+...+++++.+++..++.+|.+.|.+.|++++.+ .++-.+.+.....+..++.+.|.
T Consensus 315 SNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~---~fF~~~~v~~~~~~~~~i~~~~~ 391 (939)
T TIGR00461 315 SNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK---TWFDTLTVKVGNGISSELLKAAE 391 (939)
T ss_pred cchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC---CccceEEEEeCCCCHHHHHHHHH
Confidence 22 2233333334 4556677899999999999999999999999998764 22322222222235778888999
Q ss_pred ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 409 SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 409 ~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
+.||.++. ...+.+++++...+| .+|++.+++.+.
T Consensus 392 ~~gi~l~~---------~~~~~i~~s~~E~~t----~~di~~l~~~~~ 426 (939)
T TIGR00461 392 EFNINLRA---------VDTTTVGIALDETTT----KADVENLLKVFD 426 (939)
T ss_pred HCCCeeee---------cCCCEEEEEeecCCC----HHHHHHHHHHhc
Confidence 99999863 113579999999999 899999999995
No 322
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.46 E-value=8.5e-11 Score=117.84 Aligned_cols=317 Identities=15% Similarity=0.125 Sum_probs=181.8
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCcHHHHHHHHHhh--cCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL-DPAKWGVNVQSLSGSPANFQVYTAL--LKP 165 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~-~~~~~~~~V~~~sGs~a~~~~~~al--l~p 165 (519)
+|.|.+|+.+.+.+..+-|.|. ++|-.+.+.+.++++. +. -=.++|||.|++.+++.. ...
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e~-----vrfvnSGTEAtmsAiRlARa~Tg 134 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIEK-----VRFVNSGTEATMSAIRLARAYTG 134 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCcccE-----EEEecchhHHHHHHHHHHHHhhC
Confidence 7789999999998865444443 3455556888888886 43 144567777888777654 455
Q ss_pred CCEEEEecCCCcccccccccccCCc------eeeeee------eeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEE
Q 010058 166 HERIMALDLPHGGHLSHGYQTDTKK------ISAVSI------FFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVA 231 (519)
Q Consensus 166 GD~Vl~~~~~~~~~~~~~~~~~~~~------v~~~g~------~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~ 231 (519)
.|+|+.++-.|-||......-...+ ....|. ....+| .-|++.+++++.+. +..+|++
T Consensus 135 R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~--------yND~~al~~~~~~~g~~IAaVIv 206 (432)
T COG0001 135 RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP--------YNDLEALEEAFEEYGDDIAAVIV 206 (432)
T ss_pred CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec--------CCCHHHHHHHHHHcCCcEEEEEe
Confidence 6888888766555533222100000 011111 111122 23799999999875 5567777
Q ss_pred c--ccccccccc----HHHHHHHHhhcCCEEEehhhhhhhccc-cCCCCCCCC-CCeEEEEcCCCccc-CCCcceEEeec
Q 010058 232 G--ASAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVA-AGVIPSPFE-YADVVTTTTHKSLR-GPRGAMIFFRK 302 (519)
Q Consensus 232 ~--~sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~-~~~~~~p~~-~~di~~~S~~K~l~-GprgG~i~~~~ 302 (519)
. ..|.|.+.| ++.++++|+++|++||.|+....--+. .+... -+. ..|+.+++ |.++ |...|.+-+++
T Consensus 207 EPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~-~~gi~PDlttlG--KiIGGGlP~ga~gGr~ 283 (432)
T COG0001 207 EPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQG-YYGVEPDLTTLG--KIIGGGLPIGAFGGRA 283 (432)
T ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccc-ccCcCcchhhhh--hhhcCCcceeeeccHH
Confidence 7 455564443 789999999999999999985422222 11111 111 35887776 9885 44558888887
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCC--ccHHHHHHHHHHHHHhcC-Hh-HHHHHHHHHHHHHHHHHHHHhcCCE
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGG--PHNHTISGLAVALKQVKT-PE-YKAYQEQVLSNSSKFARSLLERGYD 378 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~--~~~~~iaal~~al~~~~~-~~-~~~~~~~~~~~~~~l~~~L~~~g~~ 378 (519)
++.+.+...-.-+..|| -+...++|-.++++.+.+ ++ |+.+.+.-.++++-|.+.+.+.|++
T Consensus 284 --------------eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~ 349 (432)
T COG0001 284 --------------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIP 349 (432)
T ss_pred --------------HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56664432211111122 244455666677777765 22 5555555555555555666666776
Q ss_pred EecCCCCcceeeeeccCCC-C--------cH---HHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHH
Q 010058 379 LVSGGTENHLVLVNLRNKG-I--------DG---SRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~~-~--------~~---~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
+......+ ++-+.+...+ . +. ..+...|.+.||.+. |+.- ...=+| ..++ ++
T Consensus 350 ~~v~~~gs-m~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~----ps~~-----ea~flS--~aht----e~ 413 (432)
T COG0001 350 LTVNRVGS-MFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLA----PSQF-----EAGFLS--TAHT----EE 413 (432)
T ss_pred eEEeeecc-eEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccC----Cccc-----cceeee--cccC----HH
Confidence 65433322 2222222211 0 11 123345667899985 3321 011122 2344 89
Q ss_pred HHHHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVKLA 462 (519)
Q Consensus 447 di~~l~~~l~~~l~~~ 462 (519)
|+++..+++.++++..
T Consensus 414 di~~~~~a~~~~~~~~ 429 (432)
T COG0001 414 DIDRTLEAADEAFKEL 429 (432)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999888653
No 323
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.46 E-value=3.6e-11 Score=122.19 Aligned_cols=302 Identities=14% Similarity=0.146 Sum_probs=169.8
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-cCCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL-LKPH 166 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al-l~pG 166 (519)
-.|.|.+|+.+.+.+-. +.+.. |. .+...+++ ++++++++.+. -+...||+.|+.+++... ..+|
T Consensus 41 ~~p~v~~ai~~ql~~~~---~~~~~-~~-~~~~~~la----~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~g 106 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLV---VAGPM-FE-HEEKEEML----EELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYTG 106 (364)
T ss_pred CCHHHHHHHHHHHHhcC---CccCC-cC-CHHHHHHH----HHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHhC
Confidence 36888899888877621 11111 22 22233333 66777776653 367788888988877765 3455
Q ss_pred -CEEEEecCCCcccccc-cccccCCceeeeee-----eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-c-c
Q 010058 167 -ERIMALDLPHGGHLSH-GYQTDTKKISAVSI-----FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-Y-A 237 (519)
Q Consensus 167 -D~Vl~~~~~~~~~~~~-~~~~~~~~v~~~g~-----~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~-g 237 (519)
++|+.++..+-|.... ......... -.+. .+..++ .-|.+.+++.+.+ ++++|++.+.. . |
T Consensus 107 r~~Ii~~~~syHG~t~~~ls~~~~~~~-~~~~~p~~~~~~~~~--------~~d~~~l~~~i~~-~~aAvivEpi~g~gG 176 (364)
T PRK04013 107 RKEIIAMTNAFHGRTMGALSATWKPKY-REDFEPLVPGFKHIP--------FNDVEAAKEAITK-ETAAVIFEPIQGEGG 176 (364)
T ss_pred CCEEEEECCccccCchhhccCCCCccc-ccCCCCCCCCcEEec--------CCCHHHHHHHhcC-CcEEEEEcCCcCCCC
Confidence 8999887654333211 110000000 0000 011111 1267889988876 88999887443 2 2
Q ss_pred -cccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCcccCC-CcceEEeecccccccc
Q 010058 238 -RLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSLRGP-RGAMIFFRKGVKEINK 309 (519)
Q Consensus 238 -~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l~Gp-rgG~i~~~~~~~~~~~ 309 (519)
...| +++++++|++||+++|.|+++. |. ..|.. . .-++ ..|+++++ |.|+|. ..|.++.+.
T Consensus 177 ~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~------- 245 (364)
T PRK04013 177 IVPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNF------- 245 (364)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEec--ccccCCceeEEEEecc-------
Confidence 3444 8999999999999999999976 44 33210 0 0011 46899886 988652 336666665
Q ss_pred cCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCccee
Q 010058 310 QGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLV 389 (519)
Q Consensus 310 ~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 389 (519)
++. .....+.+++ +....++..+.++.+.++++ .++..+. + +.|..--+.-+. +. .-+.
T Consensus 246 -------~~~----~~~~~~T~~g-np~~~aaa~a~l~~i~~~~l---~~~~~~~---l-~~l~~~~v~~vR-G~-Gl~~ 304 (364)
T PRK04013 246 -------DVE----RGKHGSTFGG-NPLACKAVAVTLRILRRERL---VEKAGEK---F-IEIKGERVVTTR-GR-GLMI 304 (364)
T ss_pred -------ccc----CCCcCCCCCc-CHHHHHHHHHHHHHHHhccH---HHHHHHH---H-HHhccCcceeee-eC-cEEE
Confidence 321 1112222233 44444444556777655443 2332222 2 222221111111 11 1233
Q ss_pred eeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 390 LVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 390 ~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
-+.+.. +...+.+.+.+.|+.+.. .+.+.||+.++...+ ++|++++++.|++++..
T Consensus 305 gve~~~---~~~~i~~~~~~~Gll~~~---------~g~~vlr~~Ppl~it----~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 305 GIVLKK---PVGKYVEELQNRGYLVHT---------AGQRVIRLLPPLIIS----KDTMEEAKSAIEGVIND 360 (364)
T ss_pred EEEeCC---cHHHHHHHHHhCCcEEee---------CCCCEEEEeCCcccC----HHHHHHHHHHHHHHHHH
Confidence 344432 245677778889999852 123679999998888 99999999999999864
No 324
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.45 E-value=1.2e-10 Score=121.22 Aligned_cols=328 Identities=14% Similarity=0.107 Sum_probs=176.1
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCcHHHHHHHHHhh--cC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSLSGSPANFQVYTAL--LK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~sGs~a~~~~~~al--l~ 164 (519)
-.|.|.+|+.+.+.+ . .+.....+. ++. . ....+++.+++... .+. .+..+||+.|+.+++... ..
T Consensus 57 ~~p~v~~ai~~ql~~-~--~~~~~~~~~-~~~---~-~~la~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~t 125 (421)
T PRK06777 57 RHPKVVAAVRQQLDQ-F--THTAYQIVP-YAS---Y-VTLAERINALAPIDGPAK---TAFFTTGAEAVENAVKIARAYT 125 (421)
T ss_pred CCHHHHHHHHHHHhh-c--ccccccccC-ChH---H-HHHHHHHHHhCCCCCCce---EEEeCCcHHHHHHHHHHHHHhh
Confidence 377888888887765 2 111111111 111 1 22236666766431 222 366788888888776643 23
Q ss_pred CCCEEEEecCCC-cccccccccccCC-ceee-ee---eeeEEEeeeeCCC--CCCCCHHHHHHHhhh----hCCcEEEEc
Q 010058 165 PHERIMALDLPH-GGHLSHGYQTDTK-KISA-VS---IFFETMPYRLDES--TGYIDYEQLEKSAAL----FRPKLIVAG 232 (519)
Q Consensus 165 pGD~Vl~~~~~~-~~~~~~~~~~~~~-~v~~-~g---~~~~~v~~~~d~~--~~~iD~d~l~~~i~~----~k~klIi~~ 232 (519)
...+|+...-.| |.+.......... .... .+ ..+..++++-... ...-+++.+++.+.+ .+..+|++.
T Consensus 126 gr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~E 205 (421)
T PRK06777 126 GRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLE 205 (421)
T ss_pred CCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEEC
Confidence 345677766433 2221111000000 0000 00 0011222221000 011246677777752 246677777
Q ss_pred ccc--cc-cccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCCcc-cCCCcceEEeec
Q 010058 233 ASA--YA-RLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSL-RGPRGAMIFFRK 302 (519)
Q Consensus 233 ~sn--~g-~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K~l-~GprgG~i~~~~ 302 (519)
|-. .| ...+ +++|+++|++||+++|+|+++. |+...+... ..++ ..|++++ +|.+ +|.+.|++++++
T Consensus 206 pv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv~~--sK~l~~G~pigav~~~~ 282 (421)
T PRK06777 206 PIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLITM--AKSLGGGMPISAVVGRA 282 (421)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEEee--ehhhcCCCceEEEEEcH
Confidence 332 34 2333 8999999999999999999976 543333110 0011 3687765 4877 466779999987
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----CC-
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER----GY- 377 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~- 377 (519)
++.+.+.........+ .+....++..++|+.+.+ +...+++.++.++|.+.|+++ ++
T Consensus 283 --------------~i~~~~~~~~~~~T~~-~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i 344 (421)
T PRK06777 283 --------------EVMDAPAPGGLGGTYA-GNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAI 344 (421)
T ss_pred --------------HHHhccCCCCCCCCCC-cCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 5555443322222233 344455555667776543 456778888888888888775 21
Q ss_pred EEecCCCCcceeeeeccCC--CCc----HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNK--GID----GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~--~~~----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
..+. +.. -++.+.+... +.+ ...+...|.+.||.+. |+.. ..+.+||.++...+ +++++++
T Consensus 345 ~~vr-g~G-~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----~~~~---~g~~lr~~ppl~i~----~~~i~~~ 411 (421)
T PRK06777 345 VDIR-ARG-SMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLL----SCGV---HGNVIRFLYPLTIP----DAQFSKA 411 (421)
T ss_pred EEec-Cce-EEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEe----ecCC---CCCEEEEeCCCCCC----HHHHHHH
Confidence 1122 222 2333333221 111 1234444567999995 4322 13589999887667 8999999
Q ss_pred HHHHHHHHH
Q 010058 452 AEFFDAAVK 460 (519)
Q Consensus 452 ~~~l~~~l~ 460 (519)
++.|.+++.
T Consensus 412 ~~~l~~~l~ 420 (421)
T PRK06777 412 LNILTRLLA 420 (421)
T ss_pred HHHHHHHHh
Confidence 999988763
No 325
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.45 E-value=7.1e-11 Score=123.20 Aligned_cols=280 Identities=16% Similarity=0.133 Sum_probs=151.7
Q ss_pred CCcHHHHHHHHHhh--cCCCCEEEEecCCC-ccccccccccc----CCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHh
Q 010058 149 LSGSPANFQVYTAL--LKPHERIMALDLPH-GGHLSHGYQTD----TKKISAVSIFFETMPYRLDESTGYIDYEQLEKSA 221 (519)
Q Consensus 149 ~sGs~a~~~~~~al--l~pGD~Vl~~~~~~-~~~~~~~~~~~----~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i 221 (519)
+||+.|+.+++... .....+|+.....| |.+........ .......-..+..+|++.......-|++++++.+
T Consensus 110 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l 189 (425)
T PRK09264 110 PTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLL 189 (425)
T ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHH
Confidence 58998888777654 23345677765433 32211111000 0000000001233443311000113678888888
Q ss_pred hhh-----CCcEEEEcc--cccccc----ccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCC
Q 010058 222 ALF-----RPKLIVAGA--SAYARL----YDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTH 287 (519)
Q Consensus 222 ~~~-----k~klIi~~~--sn~g~~----~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~ 287 (519)
.+. ++.+|++.+ ++.|.. ..+++|+++|++||+++|+|++|. |+-..|.. ..-+. ..|+++++
T Consensus 190 ~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~~-- 266 (425)
T PRK09264 190 EDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTLS-- 266 (425)
T ss_pred HhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEec--
Confidence 642 345777763 333432 258999999999999999999985 32111100 00000 35888776
Q ss_pred Cccc--CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHH-HhcCHhHHHHHHHHHHH
Q 010058 288 KSLR--GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALK-QVKTPEYKAYQEQVLSN 364 (519)
Q Consensus 288 K~l~--GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~-~~~~~~~~~~~~~~~~~ 364 (519)
|.|+ |.+.|++++++ ++ ..+.........+ .+....++..++++ .+.+ ..+.+++.++
T Consensus 267 K~l~~~G~pigav~~~~--------------~i-~~~~~~~~~~T~~-gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~ 327 (425)
T PRK09264 267 KSISGYGLPMALVLIKP--------------EL-DVWKPGEHNGTFR-GNNLAFVTATAALEEYWSD---DAFEKEVKAK 327 (425)
T ss_pred cccCCCccceEEEEEch--------------hh-hccCCCccCCCCC-CCHHHHHHHHHHHHHHHhh---hHHHHHHHHH
Confidence 9885 44458888887 33 2222211222222 23333344434553 3222 2456777777
Q ss_pred HHHHHHHHHhc--CCEE-ecC-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcccc
Q 010058 365 SSKFARSLLER--GYDL-VSG-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTS 440 (519)
Q Consensus 365 ~~~l~~~L~~~--g~~~-~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~tt 440 (519)
.++|.+.|+++ .+.. ... .....+..+.+.. ......+.+.|.+.||.+. +... ....||++++...+
T Consensus 328 g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~-~~~~~~l~~~~~~~Gv~~~----~~~~---~~~~lr~~p~l~~t 399 (425)
T PRK09264 328 GELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD-GELAGKIAAEAFENGLIIE----TSGP---EDEVVKLLPPLTID 399 (425)
T ss_pred HHHHHHHHHHHHHhCCCceecceecccEEEEEecC-hHHHHHHHHHHHHCCCEEe----ccCC---CCCEEEEeCCCCCC
Confidence 88888777664 2221 111 1122344555532 1224567777888999985 2211 13689999888888
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 010058 441 RGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 441 rg~~~~di~~l~~~l~~~l~~~ 462 (519)
++|++++++.|.+++...
T Consensus 400 ----~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 400 ----EEELEEGLDILEEAVAEV 417 (425)
T ss_pred ----HHHHHHHHHHHHHHHHHH
Confidence 899999999999999754
No 326
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.44 E-value=2.9e-12 Score=127.45 Aligned_cols=213 Identities=16% Similarity=0.082 Sum_probs=144.4
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
++..+.+| ..++++-|+.. .+.+.||..|...++..|+++||.|+..+..|++...-...... -.|.
T Consensus 76 nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~----~~gi 142 (409)
T KOG0053|consen 76 NPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLP----KFGG 142 (409)
T ss_pred CCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHH----HhCc
Confidence 34566677 88888999886 38899999888889999999999999999888877543221111 1122
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
....+ | .-|++.+++++++ ++++|++. |+| +....|+++++++|+++|+++++|..-..+ +...
T Consensus 143 e~~~v----d----~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-----~~~~ 208 (409)
T KOG0053|consen 143 EGDFV----D----VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-----YNQD 208 (409)
T ss_pred eeeee----c----hhhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-----cccC
Confidence 22221 1 1256778888887 89999998 777 779999999999999999999999983322 2233
Q ss_pred CCC-CCeEEEEcCCCcccCCCc---ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 275 PFE-YADVVTTTTHKSLRGPRG---AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gprg---G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
|++ +|||++.|..|++.|... |.++.+.+ ++.+++.... ....+.++.....-+ ++-+
T Consensus 209 pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~-------------~~~~~l~~~~-~~lg~~~~p~~~~ll---~Rgl- 270 (409)
T KOG0053|consen 209 PLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE-------------ELASRLKFLQ-EDLGWCEDPFDLFLL---SRGL- 270 (409)
T ss_pred hhhcCCCEEEEeeeeeecCCcceeeeEEecCcH-------------HHHHHHHHHH-HHhcCCCCHHHHHHH---hcCc-
Confidence 444 599999999999988654 88887743 5555443321 111122332221111 1111
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
..+.-.+++..+|+..+++.|...
T Consensus 271 -ktl~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 271 -KTLHLRINKHSENALKIALLLEAH 294 (409)
T ss_pred -chhhhhHHHHHHHHHHHHHHhhhC
Confidence 124455677788888888888876
No 327
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.44 E-value=1.6e-10 Score=121.01 Aligned_cols=328 Identities=14% Similarity=0.119 Sum_probs=174.2
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCcHHHHHHHHHhh--cC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS-LSGSPANFQVYTAL--LK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~-~sGs~a~~~~~~al--l~ 164 (519)
-.|.|.+|+.+.+.. . .+....++. ++.. .+..+++.+++..... ..|.+ +||+.|+.+++... ..
T Consensus 59 ~~p~v~~Ai~~ql~~-~--~~~~~~~~~-~~~~----~~lae~L~~~~p~~~~---~~v~f~~SGseA~e~AiklAr~~t 127 (445)
T PRK08593 59 APPRVVEAIKAQADK-F--IHYTPAYMY-HEPL----VRLAKKLCELAPGDFE---KRVTFGLSGSDANDGIIKFARAYT 127 (445)
T ss_pred CCHHHHHHHHHHHHh-c--cCccccccC-CHHH----HHHHHHHHHhCCCCCC---CEEEECCchHHHHHHHHHHHHHhh
Confidence 378899998888765 2 111111111 2222 2233677777643311 12444 77888988877743 22
Q ss_pred CCCEEEEecCC-CcccccccccccC-----C--ceeeeeeeeEEEeeeeCCC--CCCCC-------HHHHHHHhhh----
Q 010058 165 PHERIMALDLP-HGGHLSHGYQTDT-----K--KISAVSIFFETMPYRLDES--TGYID-------YEQLEKSAAL---- 223 (519)
Q Consensus 165 pGD~Vl~~~~~-~~~~~~~~~~~~~-----~--~v~~~g~~~~~v~~~~d~~--~~~iD-------~d~l~~~i~~---- 223 (519)
...+|+...-. ||.+......... . .....| +..++++-... ....+ ++++++.+..
T Consensus 128 gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (445)
T PRK08593 128 GRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPG--FVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPA 205 (445)
T ss_pred CCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCC--cEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCC
Confidence 23457766543 3332211100000 0 000011 22233321100 00011 2445544432
Q ss_pred hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCccc-CC
Q 010058 224 FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLR-GP 293 (519)
Q Consensus 224 ~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~-Gp 293 (519)
.++.+|++.|-. .|...+ +++++++|++||+++|+|++|. |+-..+.. ..-++ ..|+++++ |.++ |.
T Consensus 206 ~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~t~g--K~l~~G~ 282 (445)
T PRK08593 206 DEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLMSFG--KSLAGGM 282 (445)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEeeec--ccccCCc
Confidence 356777777332 344434 8999999999999999999974 22111110 00001 35888765 8885 45
Q ss_pred CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 010058 294 RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 294 rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (519)
+.|++++++ ++.+.+.........+ .+....++..++++.+.++ ...+++.++.++|.+.|+
T Consensus 283 p~gav~~~~--------------~i~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~ 344 (445)
T PRK08593 283 PMSAIVGRK--------------EIMESLEAPAHLFTTG-ANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFD 344 (445)
T ss_pred ccEEEEEcH--------------HHHhhhccCCCCCCCC-CCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHH
Confidence 678898887 5555543221112222 3444455555667766543 456777777778887777
Q ss_pred hc--CCEEecCCCC-cceeeeeccCC---CC-c---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 374 ER--GYDLVSGGTE-NHLVLVNLRNK---GI-D---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 374 ~~--g~~~~~~~~~-~~~~~v~~~~~---~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
++ .+.++..-.. ..+.-+.+... .. + ...+...|.+.||.+. +. ..+.+|+.++...|
T Consensus 345 ~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~----~~-----~~~~lr~~p~l~~t--- 412 (445)
T PRK08593 345 QWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVII----AV-----AGNVLRFQPPLVIT--- 412 (445)
T ss_pred HHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEe----cc-----CCCEEEEECCCccC---
Confidence 64 2333222111 11222333211 00 1 2346667778999985 21 13579999998888
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~~ 462 (519)
++|++++++.+.+++...
T Consensus 413 -~~~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 413 -YEQLDTALNTIEQAFTAL 430 (445)
T ss_pred -HHHHHHHHHHHHHHHHHH
Confidence 999999999999999754
No 328
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.43 E-value=5.1e-11 Score=127.17 Aligned_cols=239 Identities=18% Similarity=0.124 Sum_probs=147.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcC----C-----C------------------C-
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLK----P-----H------------------E- 167 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~----p-----G------------------D- 167 (519)
......+|+.+.+++++++|.+. .|| + +|||++ ||+.++.+.-+ | + |
T Consensus 118 SP~~t~lE~~vi~~la~l~G~~~-~~G--~-~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~ 193 (608)
T TIGR03811 118 SPATSQMEEEVGKEFATLMGYKN-GWG--H-IVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKE 193 (608)
T ss_pred CchHHHHHHHHHHHHHHHhCCCC-CCe--E-EeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccc
Confidence 35567899999999999999975 353 4 455555 88865544311 0 0 0
Q ss_pred ------------------------------EEEEecCCCcccccccccccCCceeeeeee---eEEEeeeeCCCCCCCCH
Q 010058 168 ------------------------------RIMALDLPHGGHLSHGYQTDTKKISAVSIF---FETMPYRLDESTGYIDY 214 (519)
Q Consensus 168 ------------------------------~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~---~~~v~~~~d~~~~~iD~ 214 (519)
+++++...|.+.. +.+.+.|.. ++.|| +| +++++|+
T Consensus 194 ~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~--------KAa~ilGlG~~~vv~Vp--vD-~~~rmd~ 262 (608)
T TIGR03811 194 IMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWL--------KAADIIGIGLDQVIPVP--VD-SNYRMDI 262 (608)
T ss_pred ccccccccccchhhhhhhccccccccccceEEEECCCccHHHH--------HHHHHcCCCcccEEEee--cC-CCCcCCH
Confidence 2333332232222 134455653 44444 55 4689999
Q ss_pred HHHHHHhhhh----CC-cEEEEc--cccccccccHHHHHHHH---hhcCC--EEEehhhhhhhc---cccC---CC----
Q 010058 215 EQLEKSAALF----RP-KLIVAG--ASAYARLYDYARIRKVC---DKQKA--VMLADMAHISGL---VAAG---VI---- 272 (519)
Q Consensus 215 d~l~~~i~~~----k~-klIi~~--~sn~g~~~d~~~i~~ia---~~~~~--~livD~ah~~g~---~~~~---~~---- 272 (519)
++|++.+.+. .| -+||.+ .+.+|.+.|+++|.++| +++|+ +++||+|+..-. +... ..
T Consensus 263 ~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~ 342 (608)
T TIGR03811 263 NELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDD 342 (608)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccch
Confidence 9999988642 23 334444 44489999999999999 66887 699999954311 1100 00
Q ss_pred -------------------C------CCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-c-cCcchhhhHHHHhhh
Q 010058 273 -------------------P------SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-K-QGQEVMYAYEDKINQ 324 (519)
Q Consensus 273 -------------------~------~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~-~g~~~~~~~~~~i~~ 324 (519)
+ ..++.+|-++...||++..|.+ |.+++++.. ... . ... .+... ..
T Consensus 343 ~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~-~~~~~~~~a----~Yl~~-~~ 416 (608)
T TIGR03811 343 LQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIR-MRDVISYFA----TYVFE-KG 416 (608)
T ss_pred hhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHH-HHHHHhcCc----chhcc-cc
Confidence 0 1245799999999999988888 888888851 000 0 000 00000 00
Q ss_pred cccC------CCCCCccHHHHHHHHHHHHHh--cCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 325 AVFP------GLQGGPHNHTISGLAVALKQV--KTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 325 ~~~~------~~~g~~~~~~iaal~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
...| ...|+..-...+++..+++.+ ...+|.++..+..++++++.+.|.+.+
T Consensus 417 ~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~ 476 (608)
T TIGR03811 417 ADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLE 476 (608)
T ss_pred ccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0011 112343334556667788776 667899999999999999999998853
No 329
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.43 E-value=1.2e-10 Score=121.16 Aligned_cols=328 Identities=12% Similarity=0.078 Sum_probs=178.1
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+|+.+.+.+ . .+.....+. ++ .+....+++.+.+....+. -....||+.|+.+++....
T Consensus 61 ~~p~v~~ai~~q~~~-~--~~~~~~~~~-~~----~~~~lae~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~~~ 129 (429)
T PRK06173 61 NHPRLNAAATNQLAK-M--SHIMFGGFT-HE----PAVELAQKLLEILPPSLNK---IFFADSGSVAVEVAMKMALQYQQ 129 (429)
T ss_pred CCHHHHHHHHHHHHh-c--CCccccccC-CH----HHHHHHHHHHhhCCCCcCE---EEEeCCchHHHHHHHHHHHHHHH
Confidence 368888888887765 2 111110111 11 1222336666666422222 2556778888887766542
Q ss_pred ---CCC-CEEEEecCCCccc-ccccccccCCc-e--eeee--eeeEEEeeeeCC--CC-CCCCHHHHHHHhhh--hCCcE
Q 010058 164 ---KPH-ERIMALDLPHGGH-LSHGYQTDTKK-I--SAVS--IFFETMPYRLDE--ST-GYIDYEQLEKSAAL--FRPKL 228 (519)
Q Consensus 164 ---~pG-D~Vl~~~~~~~~~-~~~~~~~~~~~-v--~~~g--~~~~~v~~~~d~--~~-~~iD~d~l~~~i~~--~k~kl 228 (519)
++| .+|+.....+-|. +.......... . .+.. .....+|++... +. ..-+++.+++.+.. .+..+
T Consensus 130 ~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAA 209 (429)
T PRK06173 130 AKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAA 209 (429)
T ss_pred HhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEE
Confidence 133 5677776443222 11000000000 0 0000 001222322110 00 01246667777753 25677
Q ss_pred EEEccc--cc-c----ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccCC--Ccc
Q 010058 229 IVAGAS--AY-A----RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRGP--RGA 296 (519)
Q Consensus 229 Ii~~~s--n~-g----~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~Gp--rgG 296 (519)
|++.|- .. | ...-+++++++|++||+++|+|++| .|+-..|.. ..-++ ..|+++++ |.|.|. ..+
T Consensus 210 vi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~~g--K~l~gG~~p~~ 286 (429)
T PRK06173 210 LILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMCIG--KALTGGYLTLS 286 (429)
T ss_pred EEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEEee--hhhhCCccccc
Confidence 777763 33 3 2223789999999999999999999 664222211 00011 36888864 988543 345
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhc----ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQA----VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~----~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
.+++++ ++.+.+... ...+...+.+....++..++++.+.+. ...+++.++.++|.+.|
T Consensus 287 a~~~~~--------------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L 349 (429)
T PRK06173 287 ATITTE--------------AIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQEL 349 (429)
T ss_pred eEEecH--------------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHH
Confidence 566666 444433211 111111123455555556677766543 34778888888898888
Q ss_pred Hhc-CCEEecC-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 373 LER-GYDLVSG-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 373 ~~~-g~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
++. +++.+.. .....+.-+.+... .+...+.+.|.+.||.+. +. .+.|||.++...+ ++|+++
T Consensus 350 ~~~~~~~~v~~vRg~Gl~~~iel~~~-~~~~~i~~~l~e~Gi~v~----~~------g~~l~~~Ppl~it----~~ei~~ 414 (429)
T PRK06173 350 APAAEFDSVAEVRVLGAIGVVEMKEP-VNMATLQPRFVEHGIWVR----PF------GKLVYIMPPFIIS----PDELSQ 414 (429)
T ss_pred HHhhcCCCeeeeeccceEEEEEeCCc-ccHHHHHHHHHHCCeEEE----ec------CCEEEEeCCccCC----HHHHHH
Confidence 865 4443332 01233444444332 235677888888999986 21 2479999998888 999999
Q ss_pred HHHHHHHHHHH
Q 010058 451 VAEFFDAAVKL 461 (519)
Q Consensus 451 l~~~l~~~l~~ 461 (519)
+++.|.+++..
T Consensus 415 ~~~~l~~~l~~ 425 (429)
T PRK06173 415 LTSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 330
>PRK06105 aminotransferase; Provisional
Probab=99.43 E-value=1.2e-10 Score=122.41 Aligned_cols=330 Identities=12% Similarity=0.070 Sum_probs=175.4
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+|+.+.+.+ ..-......+ . + +.+.++.+++.+++..+.+. .....||+.|+.+++....
T Consensus 65 ~~p~i~~Ai~~q~~~-~~~~~~~~~~-~-~----~~~~~lae~L~~~~p~~~~~---v~f~~SGseAve~AlKlar~~~~ 134 (460)
T PRK06105 65 SEQRLVEAAARQMKK-LPFYHTFSHK-S-H----GPVIDLAEKLVAMAPVPMSK---VFFTNSGSEANDTVVKLVWYYNN 134 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCeeccccc-C-C----HHHHHHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 478999999988865 2000011111 1 1 22223347777777543322 2555788889988777642
Q ss_pred --C-C-CCEEEEecCC-CcccccccccccCCce-eeee---eeeEEEeeeeCCC----CC------CCCHHHHHHHhhh-
Q 010058 164 --K-P-HERIMALDLP-HGGHLSHGYQTDTKKI-SAVS---IFFETMPYRLDES----TG------YIDYEQLEKSAAL- 223 (519)
Q Consensus 164 --~-p-GD~Vl~~~~~-~~~~~~~~~~~~~~~v-~~~g---~~~~~v~~~~d~~----~~------~iD~d~l~~~i~~- 223 (519)
. + ..+|+...-. ||.++........... ...+ ..+..++++.... .. ...++++++.+..
T Consensus 135 ~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~ 214 (460)
T PRK06105 135 ALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE 214 (460)
T ss_pred hcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc
Confidence 1 2 3467766543 3333221110000000 0000 0112222221000 00 0124567777642
Q ss_pred --hCCcEEEEccc--ccccccc----HHHHHHHHhhcCCEEEehhhhh-hhccccC--CCCCCCCCCeEEEEcCCCcccC
Q 010058 224 --FRPKLIVAGAS--AYARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAAG--VIPSPFEYADVVTTTTHKSLRG 292 (519)
Q Consensus 224 --~k~klIi~~~s--n~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~~--~~~~p~~~~di~~~S~~K~l~G 292 (519)
.++.+|++.|- +.|...+ +++++++|++||+++|+|++|. .|-.... .....+ ..|+++++ |.|+|
T Consensus 215 ~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~g--K~lgg 291 (460)
T PRK06105 215 GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVMS--KQLSS 291 (460)
T ss_pred CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeeee--ccccc
Confidence 24667777642 2454444 8999999999999999999974 3322100 000000 35888887 99876
Q ss_pred C--CcceEEeecccccccccCcchhhhHHHHhhhcc-------cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Q 010058 293 P--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAV-------FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLS 363 (519)
Q Consensus 293 p--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-------~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~ 363 (519)
. ..|.+++++ ++.+.+.... +.+..++ +....++..++++.+.++ +..+++.+
T Consensus 292 G~~P~~av~~~~--------------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~aaa~a~L~~i~~~---~l~~~v~~ 353 (460)
T PRK06105 292 SYQPLSAVLMNE--------------KVYDPIADESGKIGTFGHGFTASG-HPVAAAVALENLAIIEER---DLVGNAAE 353 (460)
T ss_pred CcccceEEEEcH--------------HHHHHHhcccccCcccccCCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHH
Confidence 4 467888887 4544443210 1122222 333444444567766543 45677888
Q ss_pred HHHHHHHHHHhc-CCEEecCCCC-cceeeeeccCCC-----Cc-----HHHHHHhhcccCeEEcccccCCCCCCCCCCeE
Q 010058 364 NSSKFARSLLER-GYDLVSGGTE-NHLVLVNLRNKG-----ID-----GSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431 (519)
Q Consensus 364 ~~~~l~~~L~~~-g~~~~~~~~~-~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~i 431 (519)
..++|.+.|+++ ...++..-.. ..+.-+.+.... .+ ...+...+.+.||.+. |. .+.+
T Consensus 354 ~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~----~~------g~~i 423 (460)
T PRK06105 354 RGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISR----AM------GDTL 423 (460)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEE----ec------CCEE
Confidence 888888888775 2222221011 122223332110 01 2346666778999985 21 2479
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
|++++...+ ++|++++++.+.+++...
T Consensus 424 ~l~Ppl~it----~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 424 AFCPPLIIT----AAQVDEMVDRFGRALDDV 450 (460)
T ss_pred EEECCCccC----HHHHHHHHHHHHHHHHHH
Confidence 999888777 899999999999999753
No 331
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.43 E-value=1.2e-10 Score=121.29 Aligned_cols=327 Identities=12% Similarity=0.064 Sum_probs=179.1
Q ss_pred CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcC--
Q 010058 87 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLK-- 164 (519)
Q Consensus 87 ~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~-- 164 (519)
.-.|.|.+++.+.+.. + ++.....+.. +. . ..+.+++.++++...+. .....||+.|+.+++.....
T Consensus 61 h~~p~v~~ai~~~~~~-~--~~~~~~~~~~-~~---~-~~la~~l~~~~~~~~~~---v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDK-M--SHVMFGGFTH-KP---A-IELCQKLVKMTPNALDC---VFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCCHHHHHHHHHHHHh-c--CCccccccCC-HH---H-HHHHHHHHhhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 3478999998887764 2 1111111111 11 1 22336666776543232 35666888888877664321
Q ss_pred -----C-CCEEEEecCCCcccc-cccccccCCc-ee--eeeee--eEEEeeeeCCC--CC-CCCHHHHHHHhhhh--CCc
Q 010058 165 -----P-HERIMALDLPHGGHL-SHGYQTDTKK-IS--AVSIF--FETMPYRLDES--TG-YIDYEQLEKSAALF--RPK 227 (519)
Q Consensus 165 -----p-GD~Vl~~~~~~~~~~-~~~~~~~~~~-v~--~~g~~--~~~v~~~~d~~--~~-~iD~d~l~~~i~~~--k~k 227 (519)
+ ..+|+.....|-|.. .......... .. +.+.. ...++++...- .+ .-|++++++.+..+ +..
T Consensus 130 ~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~va 209 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIA 209 (427)
T ss_pred HhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEE
Confidence 2 356877765443321 1111000000 00 00000 01122111100 00 12567777777642 455
Q ss_pred EEEEcc--cccc-----ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccCC--Cc
Q 010058 228 LIVAGA--SAYA-----RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRGP--RG 295 (519)
Q Consensus 228 lIi~~~--sn~g-----~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~Gp--rg 295 (519)
+|++.| +..| ...++++|+++|++||+++|+|++| .|+-..+.. ..-++ ..|++++ .|.|.|. ..
T Consensus 210 avivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~~--gK~l~gG~~p~ 286 (427)
T TIGR00508 210 AVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILCV--GKALTGGYMTL 286 (427)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEEe--chhhhcCcccc
Confidence 677765 3433 3456899999999999999999998 454322211 10011 3688875 5988543 23
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcc-----cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAV-----FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-----~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~ 370 (519)
+.+++++ ++.+.+.... +...++ .+....++..++++.+.+. ...+++.++.++|.+
T Consensus 287 ~a~~~~~--------------~~~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~ 348 (427)
T TIGR00508 287 SATVTTD--------------KVAQTISSGEAGCFMHGPTFM-GNPLACAVAEASLAILLEG---EWQKQVSAIENQLKR 348 (427)
T ss_pred eEEEEcH--------------HHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Confidence 5566666 4545443211 111122 2455555555677766543 346788888899999
Q ss_pred HHHhcCCE-EecCCC-CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHH
Q 010058 371 SLLERGYD-LVSGGT-ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF 448 (519)
Q Consensus 371 ~L~~~g~~-~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di 448 (519)
.|++++.. .+.... ...+..+.+.. ..+...+.+.|.+.||.+. +. ...+|++++...| ++|+
T Consensus 349 ~L~~l~~~~~i~~vrg~G~~~~i~~~~-~~~~~~~~~~l~~~Gv~~~----~~------~~~l~~~ppl~~t----~~~i 413 (427)
T TIGR00508 349 ELSPLRKNPVVKDVRVLGAIGVVEMYK-PVNVEELQKKFVEQGVWIR----PF------GKLIYVMPPYIIT----TEQL 413 (427)
T ss_pred HHHHhhcCCCEEeEeccccEEEEEECC-ccCHHHHHHHHHHCCeEEE----ec------CCEEEEECCCCCC----HHHH
Confidence 99887421 122100 12334444432 1235678888888999985 21 2469999998888 8999
Q ss_pred HHHHHHHHHHHH
Q 010058 449 EKVAEFFDAAVK 460 (519)
Q Consensus 449 ~~l~~~l~~~l~ 460 (519)
+++++++++++.
T Consensus 414 d~~~~~l~~~l~ 425 (427)
T TIGR00508 414 QKLTAALIEALH 425 (427)
T ss_pred HHHHHHHHHHHh
Confidence 999999999885
No 332
>PRK06062 hypothetical protein; Provisional
Probab=99.43 E-value=1.2e-10 Score=121.98 Aligned_cols=327 Identities=16% Similarity=0.148 Sum_probs=170.8
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~p 165 (519)
-.|.|.+|+.+.+.. . .+... .+. .+ ......+++.+++....+. -...+||+.|+.+++... ...
T Consensus 70 ~~p~v~~Ai~~q~~~-~--~~~~~-~~~-~~----~~~~lae~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~tg 137 (451)
T PRK06062 70 QHPKVVAAIQEQAAR-L--CTVAP-AHA-ND----ARSEAARLIAERAPGDLSK---VFFTNGGADANEHAVRMARLHTG 137 (451)
T ss_pred CCHHHHHHHHHHHHh-c--CCcCC-ccC-CH----HHHHHHHHHHHhCCCCCCE---EEEcCChHHHHHHHHHHHHHhhC
Confidence 478899999887765 2 11111 111 11 2222336666666432222 255567877888777754 223
Q ss_pred CCEEEEecCC-CcccccccccccCC---c--eeeeeeeeEEEeeeeCCC-CCCCC-------HHHHHHHhhh---hCCcE
Q 010058 166 HERIMALDLP-HGGHLSHGYQTDTK---K--ISAVSIFFETMPYRLDES-TGYID-------YEQLEKSAAL---FRPKL 228 (519)
Q Consensus 166 GD~Vl~~~~~-~~~~~~~~~~~~~~---~--v~~~g~~~~~v~~~~d~~-~~~iD-------~d~l~~~i~~---~k~kl 228 (519)
..+|+...-. ||.+.......... . ....|......|+..... ...-| ++.+++.+.. .++.+
T Consensus 138 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAa 217 (451)
T PRK06062 138 RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAA 217 (451)
T ss_pred CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 4567776543 33321111100000 0 000011111111111000 00012 6777877753 24567
Q ss_pred EEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccCC--Ccce
Q 010058 229 IVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRGP--RGAM 297 (519)
Q Consensus 229 Ii~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~Gp--rgG~ 297 (519)
|++.| ++-|...+ +++++++|++||+++|+|++|. |+-..+.. ..-++ ..|+++++ |.|+|. ..|.
T Consensus 218 viiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~t~g--K~lggG~~Piga 294 (451)
T PRK06062 218 ILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLITFA--KGVNSGYVPLGG 294 (451)
T ss_pred EEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCeeeec--hhhhcCCcCcEE
Confidence 77763 33455555 8999999999999999999976 32111110 00001 35888876 999763 3466
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcc-cCC-CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHH-HHHHHHHHh
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAV-FPG-LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNS-SKFARSLLE 374 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-~~~-~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~-~~l~~~L~~ 374 (519)
+++++ ++.+.+.... ..+ .+++ +....++..++|+.+.+++ ..+++.+.. ++|.+.|++
T Consensus 295 v~~~~--------------~i~~~~~~~~~~~~~T~~g-npl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~ 356 (451)
T PRK06062 295 VAISE--------------AIAATFADRPYPGGLTYSG-HPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRE 356 (451)
T ss_pred EEEcH--------------HHHHHhccCCCCCCCCCCC-CHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHH
Confidence 66666 4444443221 121 2233 4455555556777665433 455555554 456666655
Q ss_pred c--CCEEecC--CCCcceeeeeccCC-----CC--------cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCc
Q 010058 375 R--GYDLVSG--GTENHLVLVNLRNK-----GI--------DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPA 437 (519)
Q Consensus 375 ~--g~~~~~~--~~~~~~~~v~~~~~-----~~--------~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~ 437 (519)
+ .+..+.. +.. .+.-+.+... .+ ....+.+.|.+.||.+.. + .+.+|++++.
T Consensus 357 l~~~~~~v~~vrG~G-l~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~---~-------~~~lrl~ppl 425 (451)
T PRK06062 357 LAERHPSVGEVRGLG-VFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV---N-------GNRIHVVPPC 425 (451)
T ss_pred HHhcCCcEEeEeccc-cEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee---c-------CCEEEEECCc
Confidence 4 2222211 121 2233333210 01 123566778889999751 1 2469999888
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 438 LTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 438 ~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
..| ++|++++++.++++++..
T Consensus 426 ~~t----~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 426 TVT----EDEVREGLAILDAALAVA 446 (451)
T ss_pred cCC----HHHHHHHHHHHHHHHHHh
Confidence 778 999999999999999753
No 333
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.42 E-value=1.5e-10 Score=120.20 Aligned_cols=327 Identities=14% Similarity=0.093 Sum_probs=170.8
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceE-Ee-CCcHHHHHHHHHhh--c
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNV-QS-LSGSPANFQVYTAL--L 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V-~~-~sGs~a~~~~~~al--l 163 (519)
-.|.|.+|+.+.+.+. ++.....+ .++ ......+++.+....... +...+ .+ +||+.|+.+++... .
T Consensus 52 ~~p~v~~ai~~ql~~~---~~~~~~~~-~~~----~~~~lae~l~~~~~~~~~-~~~~~~f~~~sGseA~e~AlklAr~~ 122 (412)
T TIGR02407 52 NNPKLKQALIDYLADD---GIIHSLDM-ATE----AKREFLETFNEIILKPRG-LDYKVQFPGPTGTNAVESALKLARKV 122 (412)
T ss_pred CCHHHHHHHHHHHhhc---cceecccc-CcH----HHHHHHHHHHHhccCccC-CCceEEEeCCCchHHHHHHHHHHhhh
Confidence 4788888888877641 11111111 111 122223555555311100 00023 33 68998888777654 2
Q ss_pred CCCCEEEEecCCC-ccccccccccc----CCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-----hCCcEEEEcc
Q 010058 164 KPHERIMALDLPH-GGHLSHGYQTD----TKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL-----FRPKLIVAGA 233 (519)
Q Consensus 164 ~pGD~Vl~~~~~~-~~~~~~~~~~~----~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~-----~k~klIi~~~ 233 (519)
....+|+.....| |.+........ .......-..+..+|++.......-+++.+++.+.+ .++.+|++.+
T Consensus 123 tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Ep 202 (412)
T TIGR02407 123 TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILET 202 (412)
T ss_pred cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEecc
Confidence 3346788766443 32211110000 000000000122333321000001246778887763 2456777763
Q ss_pred c--cccc----cccHHHHHHHHhhcCCEEEehhhhhhhccc------cCCCCCCCCCCeEEEEcCCCccc--CCCcceEE
Q 010058 234 S--AYAR----LYDYARIRKVCDKQKAVMLADMAHISGLVA------AGVIPSPFEYADVVTTTTHKSLR--GPRGAMIF 299 (519)
Q Consensus 234 s--n~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~------~~~~~~p~~~~di~~~S~~K~l~--GprgG~i~ 299 (519)
- +.|. ..-+++|+++|++||+++|+|+.+. |+-. .....- ..|+++++ |+|+ |.+.|+++
T Consensus 203 i~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v---~PDi~~~~--K~lg~~G~pigav~ 276 (412)
T TIGR02407 203 VQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGI---EPDIVCLS--KSISGYGLPLALTL 276 (412)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCC---CCCEEEec--hhccCCccceeEEE
Confidence 2 2343 2337899999999999999999975 3211 111111 35888876 9985 44568898
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHH-hcCHhHHHHHHHHHHHHHHHHHHHHhc--C
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ-VKTPEYKAYQEQVLSNSSKFARSLLER--G 376 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~--g 376 (519)
+++ ++ ..+......... +.+....++..++++. +.+. .+.+++.+..++|.+.|+.+ .
T Consensus 277 ~~~--------------~~-~~~~~~~~~~T~-~gnpl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~ 337 (412)
T TIGR02407 277 IKP--------------EL-DVWKPGEHNGTF-RGNNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAE 337 (412)
T ss_pred Ech--------------hh-hccCCCccCCCC-CccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhh
Confidence 887 33 222211111122 2334444444456664 4432 34566666666666666543 1
Q ss_pred CE--EecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 377 YD--LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 377 ~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
+. +........+.++.+.. ......+...|.+.||.+.. .. ...+.||+.++...+ ++|++++++.
T Consensus 338 ~~~~~~~vrg~Gl~~~l~l~~-~~~~~~~~~~~~~~Gv~v~~----~~---~~~~~lr~~p~l~~t----~~~i~~~~~~ 405 (412)
T TIGR02407 338 YPELIKQVRGRGLMQGIECGD-GDLAGKIAKAAFENGLIIET----SG---PNDEVIKLLPPLTID----EETLQQGLDI 405 (412)
T ss_pred CCCceEeeecceeEEEEEecC-hHHHHHHHHHHHHCCCEEec----cC---CCCCEEEEECCCCCC----HHHHHHHHHH
Confidence 11 11111123345666543 22345677788889999862 11 124679999998888 9999999999
Q ss_pred HHHHHH
Q 010058 455 FDAAVK 460 (519)
Q Consensus 455 l~~~l~ 460 (519)
|++++.
T Consensus 406 l~~~l~ 411 (412)
T TIGR02407 406 LEQAVE 411 (412)
T ss_pred HHHHHh
Confidence 999874
No 334
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=1.1e-10 Score=113.29 Aligned_cols=314 Identities=17% Similarity=0.175 Sum_probs=184.4
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-l~p 165 (519)
.|..+++.....|..-- |..|. |...+++.-+++...+.+.+.=| .++.| .+|..|+|++ |...++.-+ -.+
T Consensus 87 fp~Dai~RA~~~L~~~g--Gs~Ga--YS~SqGv~~vR~~VA~~I~rRDG-~p~~p-~dI~LT~GAS~ai~~il~l~~~~~ 160 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCG--GSLGA--YSDSQGVPGVRKHVAEFIERRDG-IPADP-EDIFLTTGASPAIRSILSLLIAGK 160 (475)
T ss_pred CCHHHHHHHHHHHHhcC--Ccccc--cccccCChhHHHHHHHHHHhccC-CCCCH-HHeeecCCCcHHHHHHHHHHhcCC
Confidence 45566676677776522 44444 67778888888888888888888 44444 5799999998 766566665 458
Q ss_pred CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhh----CCcE-EEEcccc-ccc
Q 010058 166 HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALF----RPKL-IVAGASA-YAR 238 (519)
Q Consensus 166 GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~----k~kl-Ii~~~sn-~g~ 238 (519)
.|.|+++- |-|+++...+...| ...++|-+|.+ +|.+|.++|++.+.+. +|++ +|++|-| +|.
T Consensus 161 ~~GvliPi--------PQYPLYsAti~l~~--~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGq 230 (475)
T KOG0258|consen 161 KTGVLIPI--------PQYPLYSATISLLG--GTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQ 230 (475)
T ss_pred CCceEeec--------CCCchhHHHHHHhC--CcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccch
Confidence 89999987 44444433333333 23456666654 6899999999887653 5655 4556777 884
Q ss_pred c---ccHHHHHHHHhhcCCEEEehhhhhhhccccCC-----------CCCCCC-CCeE-EEEcCCCcc---cCCCcceEE
Q 010058 239 L---YDYARIRKVCDKQKAVMLADMAHISGLVAAGV-----------IPSPFE-YADV-VTTTTHKSL---RGPRGAMIF 299 (519)
Q Consensus 239 ~---~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~-----------~~~p~~-~~di-~~~S~~K~l---~GprgG~i~ 299 (519)
. ..+++|..+|.+.+++|+.|+.+--.....+. ...|.+ .... -..|+||++ +|.|||+.=
T Consensus 231 vls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 231 VLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYME 310 (475)
T ss_pred hhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeee
Confidence 4 45788999999999999999985433222210 011211 1222 234677876 689999864
Q ss_pred eecccccccccCcchhhhHHH-----------HhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH
Q 010058 300 FRKGVKEINKQGQEVMYAYED-----------KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKF 368 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~-----------~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l 368 (519)
.-.. .|..+. ..+++.. .++..+.|-..|.+......+ +-+.+.+..+++++.+
T Consensus 311 v~n~---~prv~~-qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~-----------Ekd~il~~l~~ra~l~ 375 (475)
T KOG0258|consen 311 SLNR---DPRVKQ-QIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSS-----------EKDGILSSLRSRAKLT 375 (475)
T ss_pred cccC---ChhHHH-HHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhh-----------hhHhHHHHHHHHhHHH
Confidence 3221 000000 0000000 011122222223333322221 2345566778889999
Q ss_pred HHHHHhc-CCEEecCCCCccee--eeeccC--------CCCcHHH--HHHhhcccCeEEcccccCCCC-C-CCCCCeEEe
Q 010058 369 ARSLLER-GYDLVSGGTENHLV--LVNLRN--------KGIDGSR--VEKVLESVHIAANKNTVPGDV-S-AMVPGGIRM 433 (519)
Q Consensus 369 ~~~L~~~-g~~~~~~~~~~~~~--~v~~~~--------~~~~~~~--~~~~L~~~gI~v~~~~~p~~~-~-~~~~~~iRi 433 (519)
.+.+++. |+.+.... ...+. -+.+.+ .++..+. +.++|+.-||.+ +||+. + ..+.-++|.
T Consensus 376 ~~~~ns~~gi~cn~~q-GAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcv----VPGSGFGQ~~GtyH~R~ 450 (475)
T KOG0258|consen 376 EDAFNSLEGISCNPVQ-GAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICV----VPGSGFGQKEGTYHFRT 450 (475)
T ss_pred HHHHhhcCceeeccCc-cceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEE----ecCCCCCCCCceeEEEE
Confidence 9999998 88776542 12221 223322 1233333 456788899998 58886 2 223446887
Q ss_pred ccCc
Q 010058 434 GTPA 437 (519)
Q Consensus 434 ~~~~ 437 (519)
.+..
T Consensus 451 TiLp 454 (475)
T KOG0258|consen 451 TILP 454 (475)
T ss_pred eecC
Confidence 6543
No 335
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.42 E-value=1.2e-10 Score=121.42 Aligned_cols=328 Identities=15% Similarity=0.077 Sum_probs=168.5
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCcHHHHHHHHHhh--cC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL-DPAKWGVNVQSLSGSPANFQVYTAL--LK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~-~~~~~~~~V~~~sGs~a~~~~~~al--l~ 164 (519)
-.|.|.+|+.+.+.. . .+.....+. .+ .. ....+++.+++.. ..+. ....+||+.|+.+++... ..
T Consensus 50 ~~p~v~~a~~~ql~~-~--~~~~~~~~~-~~---~~-~~la~~l~~~~p~~~~~~---v~f~~sGseA~e~AlklAr~~t 118 (420)
T TIGR00700 50 SHPRVVDAVRTQVAE-F--THTCFMVTP-YE---GY-VALAEKLNRIAPGSGPKK---SVFFNSGAEAVENAVKIARSYT 118 (420)
T ss_pred CCHHHHHHHHHHHHh-c--cCccccccC-Ch---HH-HHHHHHHHHhCCCCCCCE---EEEeCCcHHHHHHHHHHHHHhc
Confidence 478888888887765 2 111111011 11 11 2233566666642 1222 366678888888776643 23
Q ss_pred CCCEEEEecCCC-ccccccccccc-----CCceeeeeeeeEEEeeeeCC--------CCCCCCHHHHHHHhh----hhCC
Q 010058 165 PHERIMALDLPH-GGHLSHGYQTD-----TKKISAVSIFFETMPYRLDE--------STGYIDYEQLEKSAA----LFRP 226 (519)
Q Consensus 165 pGD~Vl~~~~~~-~~~~~~~~~~~-----~~~v~~~g~~~~~v~~~~d~--------~~~~iD~d~l~~~i~----~~k~ 226 (519)
...+|+...-.| |.+........ .......-..+..++++... ....-+++.+++.+. ..+.
T Consensus 119 gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 198 (420)
T TIGR00700 119 GRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNV 198 (420)
T ss_pred CCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcE
Confidence 345677665433 22211110000 00000000011222322100 000112456776653 1256
Q ss_pred cEEEEccc--ccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCCcc-cCCCcc
Q 010058 227 KLIVAGAS--AYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSL-RGPRGA 296 (519)
Q Consensus 227 klIi~~~s--n~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K~l-~GprgG 296 (519)
.+|++.|- +.|...+ +++|+++|++||+++|+|+.+. |+...+... ..++ ..|++++| |++ +|++.|
T Consensus 199 Aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-g~gr~g~~~a~~~~~~~pDi~~ls--K~l~~G~pig 275 (420)
T TIGR00700 199 AALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQT-GFARTGAMFACEHEGPEPDLITTA--KSLADGLPLS 275 (420)
T ss_pred EEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccchhHHHhhcCCCCCEEEee--ccccCCcceE
Confidence 77777633 2443333 8999999999999999999854 332222100 0011 46887755 877 467779
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER- 375 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 375 (519)
++++++ ++.+.+.........++ +....++..++++.+....+ .++..+..+.+.+.|++.
T Consensus 276 ~v~~~~--------------~i~~~~~~~~~~~T~~~-~pl~~aaa~a~l~~l~~~~~---~~~~~~~g~~l~~~L~~l~ 337 (420)
T TIGR00700 276 GVTGRA--------------EIMDAPAPGGLGGTYAG-NPLACAAALAVLAIIESEGL---IERARQIGRLVTDRLTTLK 337 (420)
T ss_pred EEEecH--------------HHHhhcCCCCcCCCCCc-CHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHH
Confidence 999987 55554433222222333 34444444556666544343 344444445555555443
Q ss_pred ---C-CEEecCCCCcceeeeeccCCC--C-c---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCH
Q 010058 376 ---G-YDLVSGGTENHLVLVNLRNKG--I-D---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVE 445 (519)
Q Consensus 376 ---g-~~~~~~~~~~~~~~v~~~~~~--~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~ 445 (519)
+ +..+.+ . ..+.++.+.... . + ...+.+.+.+.||.+. |+.. ..+.|||+++...+ +
T Consensus 338 ~~~~~~~~vrg-~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----p~~~---f~~~lRl~p~l~~~----~ 404 (420)
T TIGR00700 338 AVDPRIGDVRG-L-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLL----TCGM---FGNIIRFLPPLTIG----D 404 (420)
T ss_pred hhCCCEEEeec-c-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEe----ccCC---CCCEEEEECCCCcC----H
Confidence 2 222222 2 234455442210 1 1 2334555568999985 5432 13689999876566 7
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 446 EDFEKVAEFFDAAVK 460 (519)
Q Consensus 446 ~di~~l~~~l~~~l~ 460 (519)
+++++.++.|.+++.
T Consensus 405 ~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 405 ELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998874
No 336
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.42 E-value=2.6e-11 Score=120.54 Aligned_cols=306 Identities=13% Similarity=0.182 Sum_probs=198.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh---cCC--C---CEEEEecCCCcccccccccccCC
Q 010058 119 YIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL---LKP--H---ERIMALDLPHGGHLSHGYQTDTK 189 (519)
Q Consensus 119 ~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al---l~p--G---D~Vl~~~~~~~~~~~~~~~~~~~ 189 (519)
...+++.+|...++.+|+.+.+.. =..|+|++ +.+++.... ... | -.++++...|.+.-.
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~~~~~---g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK-------- 185 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAPSDSC---GCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEK-------- 185 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCCcccc---CccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHH--------
Confidence 357889999999999999986643 23356665 644333332 111 1 123322222222111
Q ss_pred ceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc--ccccccHHHHHHHHhh-cCCEEEehhhhhhhc
Q 010058 190 KISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA--YARLYDYARIRKVCDK-QKAVMLADMAHISGL 266 (519)
Q Consensus 190 ~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn--~g~~~d~~~i~~ia~~-~~~~livD~ah~~g~ 266 (519)
.....+..++.+++ ++.++.+|+..+.+.+.+ +|.+|+....+ +|...|+++|.++.-+ +++.+++|++ ..|.
T Consensus 186 ~a~yf~v~l~~V~~--~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~-~GgF 261 (491)
T KOG1383|consen 186 AARYFEVELREVPL--DEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDAC-LGGF 261 (491)
T ss_pred HHhhEEEEEEeeec--cccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeeccc-Cccc
Confidence 22334566666664 556799999999999998 99999888444 6889999999999988 9999999988 3344
Q ss_pred ccc-CC-CCCCC----CCCeEEEEcCCCcccCCCc-ceEEeecc-cc-----ccc-ccCcchhhhHHHHhhhcccCCCCC
Q 010058 267 VAA-GV-IPSPF----EYADVVTTTTHKSLRGPRG-AMIFFRKG-VK-----EIN-KQGQEVMYAYEDKINQAVFPGLQG 332 (519)
Q Consensus 267 ~~~-~~-~~~p~----~~~di~~~S~~K~l~Gprg-G~i~~~~~-~~-----~~~-~~g~~~~~~~~~~i~~~~~~~~~g 332 (519)
+.. +. ...++ ++..-++.++||.-..|.| |+++.+.. .. ... |.||.. ..|.+.|
T Consensus 262 i~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y-----------~s~Tlng 330 (491)
T KOG1383|consen 262 INPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIY-----------ASPTLNG 330 (491)
T ss_pred cccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccc-----------cCccccc
Confidence 432 22 22122 2677888999997556777 88877763 21 111 333211 1122335
Q ss_pred CccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccC
Q 010058 333 GPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVH 411 (519)
Q Consensus 333 ~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~g 411 (519)
+-.-.++++..+++-.+..++|.+..+++.++++.|.+.+++. ++.+++.+ -..++.+.....+-.++.+.|.+.|
T Consensus 331 SR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp---~vs~~~~~s~~~~i~elsd~l~~~G 407 (491)
T KOG1383|consen 331 SRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKP---LVSFILFGSNDVNIFELSDLLRKKG 407 (491)
T ss_pred CCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC---cEEEEEccCCccchhhhhHHHHhcC
Confidence 5556677788888888888899999999999999999999998 88887652 2334444444567788999999999
Q ss_pred eEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhh
Q 010058 412 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALK 464 (519)
Q Consensus 412 I~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~ 464 (519)
..++.-..| ..+-+++.....| ++=.++++.-|.++++....
T Consensus 408 W~lnalq~P--------~a~Hi~vt~~~~~---~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 408 WILNALQFP--------AAIHICVTRVHAR---EDVADRFVADIRKVVEELKS 449 (491)
T ss_pred cCccccCCC--------CceEEEEEeeecc---HHHHHHHHHHHHHHHHHHHh
Confidence 998633222 2455555444442 33246666666666665433
No 337
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.42 E-value=1.2e-10 Score=114.02 Aligned_cols=342 Identities=17% Similarity=0.138 Sum_probs=170.0
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhh---c-cCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTN---K-YSEGYPGARYY-GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~---~-~~~g~p~~~~y-~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
.+++|.-+-.-++++-++--...|.- . +......-|.| |+.+++.+++ +.+++++|++++ +|++...
T Consensus 23 ~~L~LdmtRGKPs~eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r----~l~a~llgv~~~----~viv~gN 94 (425)
T PF12897_consen 23 KGLKLDMTRGKPSPEQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEAR----ELFAELLGVPPE----NVIVGGN 94 (425)
T ss_dssp TT--EES---S--HHHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHH----HHHHHHHTS-GG----GEEE-SS
T ss_pred cCCCcccCCCCCCHHHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHH----HHHHHHhCCCHH----HEEEecc
Confidence 56777777777777777654444432 1 11111234778 8888888777 888999999985 6888887
Q ss_pred HHHHHH---HHHhhcC--C----------CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHH
Q 010058 152 SPANFQ---VYTALLK--P----------HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQ 216 (519)
Q Consensus 152 s~a~~~---~~~all~--p----------GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~ 216 (519)
++.++. +..+++. + .=+.|++.+.|.-|+. .....|+....||+.- ...|+|.
T Consensus 95 SSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa--------i~E~~Giemi~VpM~~----dGPDmD~ 162 (425)
T PF12897_consen 95 SSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA--------ITEHFGIEMIPVPMTE----DGPDMDM 162 (425)
T ss_dssp -HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH--------HHHHCT-EEEEEEEET----TEE-HHH
T ss_pred chHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH--------HHHhhCcEEEecCCCC----CCCCHHH
Confidence 773331 3333321 1 2256777755555543 3334466666666542 3579999
Q ss_pred HHHHhh-hhCCcEEEEc--ccc-ccccccHHHHHHHH----hhcCCEEEehhhhhhhccccCCCCC-CC-----------
Q 010058 217 LEKSAA-LFRPKLIVAG--ASA-YARLYDYARIRKVC----DKQKAVMLADMAHISGLVAAGVIPS-PF----------- 276 (519)
Q Consensus 217 l~~~i~-~~k~klIi~~--~sn-~g~~~d~~~i~~ia----~~~~~~livD~ah~~g~~~~~~~~~-p~----------- 276 (519)
+++++. +...|.|++. +|| +|..++-+.++++| ...+..++.|.|++.-.+..+.... ++
T Consensus 163 Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGn 242 (425)
T PF12897_consen 163 VEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGN 242 (425)
T ss_dssp HHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-
T ss_pred HHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCC
Confidence 999985 4466899998 788 88888877777776 3568999999997766553221111 01
Q ss_pred CCCeEEEEcCCC-cccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHH
Q 010058 277 EYADVVTTTTHK-SLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYK 355 (519)
Q Consensus 277 ~~~di~~~S~~K-~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~ 355 (519)
+.--++..||+| +++|-..+++.++.. + .+.+.+.......|.--.+++.- ..-|+... .+++
T Consensus 243 pdrv~~F~STSKITf~GaGva~~aaS~~-------------N-l~~~~~~~~~~tIgpdKvNQLRH-vrff~d~~-gGv~ 306 (425)
T PF12897_consen 243 PDRVYVFASTSKITFPGAGVAFFAASEA-------------N-LAWIKKHLSVQTIGPDKVNQLRH-VRFFKDAE-GGVR 306 (425)
T ss_dssp TTSEEEEEESTTTS-TTSS-EEEEE-HH-------------H-HHHHHHHHHHH-S---HHHHHHH-HHHHHSHH-THHH
T ss_pred CCeEEEEecccccccCCcceeeeecCHH-------------H-HHHHHHHhcCceeCccHHHHHHH-HHHhcChh-hHHH
Confidence 133477889999 567766688888773 1 11111111000111111222211 11121110 0222
Q ss_pred HHH--------HHHHHHHHHHHHHHH-hcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEccc--ccCCCCC
Q 010058 356 AYQ--------EQVLSNSSKFARSLL-ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKN--TVPGDVS 424 (519)
Q Consensus 356 ~~~--------~~~~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~--~~p~~~~ 424 (519)
+.. -+.....+.|.+.|. ..|+--++.+...+++.++..+ | +++.+.+++.++||.+... +.|....
T Consensus 307 aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G-~AkrvV~lakeAGV~LT~AGAtfPyg~D 384 (425)
T PF12897_consen 307 AHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-G-TAKRVVELAKEAGVALTPAGATFPYGKD 384 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T--HHHHHHHHHHTTEE---TTTTSGGG--
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-C-hHHHHHHHHHHhCceeCCCCCCCCCCCC
Confidence 211 122233344555666 4566555555566777777644 3 6888999999999999752 2333322
Q ss_pred CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 425 AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 425 ~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
| ..+.|||.....+ .+|++...+.+.-+++.+
T Consensus 385 P-~D~nIRiAPS~P~-----leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 385 P-RDSNIRIAPSYPS-----LEELETAMDVFATCVKLA 416 (425)
T ss_dssp T-TS-EEEE--SSS------HHHHHHHHHHHHHHHHHH
T ss_pred C-CCCcEEecCCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 2 3568999876544 599999999998888754
No 338
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=1.6e-10 Score=120.85 Aligned_cols=325 Identities=15% Similarity=0.098 Sum_probs=172.9
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCcHHHHHHHHHhh--cC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSLSGSPANFQVYTAL--LK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~sGs~a~~~~~~al--l~ 164 (519)
-.|.|.+|+.+.+.... +.....+. ...+....+++.+++... .+. ....+||+.|+.+++... ..
T Consensus 71 ~~p~v~~Ai~~ql~~~~---~~~~~~~~-----~~~~~~lAe~L~~~~p~~~~~~---v~f~~SGsEA~e~AlklAr~~t 139 (441)
T PRK05769 71 AHPKVVKAVKEQAEKFL---HYSLTDFY-----YEPAVELAERLVEIAPGGFEKK---VFFTNSGTESNEAAIKIARYHT 139 (441)
T ss_pred CCHHHHHHHHHHHHhcc---CccCcccC-----CHHHHHHHHHHHHhCCCCCCCE---EEECCchHHHHHHHHHHHHHHh
Confidence 36889999998876521 11110011 122233446777776421 121 245567777888777643 22
Q ss_pred CCCEEEEecCCC-cccccccccccCCc-------eeeeeeeeEEEeeee------CCCCC----CCCHHHHHHHh-h---
Q 010058 165 PHERIMALDLPH-GGHLSHGYQTDTKK-------ISAVSIFFETMPYRL------DESTG----YIDYEQLEKSA-A--- 222 (519)
Q Consensus 165 pGD~Vl~~~~~~-~~~~~~~~~~~~~~-------v~~~g~~~~~v~~~~------d~~~~----~iD~d~l~~~i-~--- 222 (519)
..++|+...-.| |.+........... ....| +..++++. +.++. .-+.+.+++.+ .
T Consensus 140 gr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~ 217 (441)
T PRK05769 140 GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPG--VIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLV 217 (441)
T ss_pred CCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCC--eEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhcc
Confidence 346777765433 32211111000000 00111 22233221 00000 01234455522 2
Q ss_pred -hhCCcEEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCccc-
Q 010058 223 -LFRPKLIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLR- 291 (519)
Q Consensus 223 -~~k~klIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~- 291 (519)
..++.+|++.+ ++.|...+ +++++++|++||+++|+|++|. |+-..+.. ..-++ ..|+++++ |.++
T Consensus 218 ~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt~~--K~l~~ 294 (441)
T PRK05769 218 PPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIITLA--KAIAG 294 (441)
T ss_pred CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEEEc--ccccC
Confidence 12566777763 33466566 9999999999999999999987 43222211 00011 35888766 8775
Q ss_pred CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHH
Q 010058 292 GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371 (519)
Q Consensus 292 GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (519)
|.+.|++++++ ++..... .......++ +....++..++++.+.+ ...+++.++.++|.+.
T Consensus 295 G~p~gav~~~~--------------~i~~~~~-~~~~~T~~g-~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~ 354 (441)
T PRK05769 295 GLPLGAVIGRA--------------ELMFLPP-GSHANTFGG-NPVAAAAALATLEELEE----GLLENAQKLGEYLRKE 354 (441)
T ss_pred CcccEEEEEeh--------------hhhhcCC-CCCCCCCCc-CHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 45568888887 3433211 112222233 34444444556666542 5567788888888888
Q ss_pred HHhcC--CEEecCCC-CcceeeeeccCCC--C---cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 372 LLERG--YDLVSGGT-ENHLVLVNLRNKG--I---DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 372 L~~~g--~~~~~~~~-~~~~~~v~~~~~~--~---~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
|+++. +.++.... ...+.-+.+.... . ....+.+.|.+.||.+. |. +...+|++++...|
T Consensus 355 L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~----~~-----~~~~lr~~p~l~~t--- 422 (441)
T PRK05769 355 LKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLL----GA-----GKSAIRIIPPLIIT--- 422 (441)
T ss_pred HHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEe----cC-----CCCEEEEeCCCCCC---
Confidence 87652 33332211 1123333332210 0 12345666778999985 21 23579999888778
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.+.+++..
T Consensus 423 -~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 423 -EEEADIGLEILEEAIKE 439 (441)
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 99999999999998863
No 339
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.41 E-value=1.2e-10 Score=120.96 Aligned_cols=211 Identities=16% Similarity=0.141 Sum_probs=129.7
Q ss_pred HHHHHHhhhhCCcEEEEccc-c--cc----ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEE
Q 010058 215 EQLEKSAALFRPKLIVAGAS-A--YA----RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTT 284 (519)
Q Consensus 215 d~l~~~i~~~k~klIi~~~s-n--~g----~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~ 284 (519)
+.+++.+.+ +..+|++.|- . .| ....+++++++|++||+++|+|++| .|+-..+.. . .-++ ..|++++
T Consensus 191 ~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~t~ 268 (422)
T PRK05630 191 RSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIMCV 268 (422)
T ss_pred HHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCeeee
Confidence 445555554 7888888763 2 23 3344899999999999999999998 443221110 0 0000 3588876
Q ss_pred cCCCcccC--CCcceEEeecccccccccCcchhhhHHHHhhhc-----ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 285 TTHKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-----VFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 285 S~~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-----~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
+ |+|+| +..|.+++++ ++.+.+... ...+...+.+....++..++++.+.+.. .
T Consensus 269 g--K~l~gG~~p~~av~~~~--------------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~---~ 329 (422)
T PRK05630 269 G--KALTGGFMSFAATLCTD--------------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGM---W 329 (422)
T ss_pred e--chhhcCccccceeeccH--------------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCc---H
Confidence 5 99955 5678888887 444443211 1112122344555555566777765433 3
Q ss_pred HHHHHHHHHHHHHHHHhc-CCEEecCCC-CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc
Q 010058 358 QEQVLSNSSKFARSLLER-GYDLVSGGT-ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT 435 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~ 435 (519)
.+++.++.++|.+.|+++ ....+..-. -..+.-+.+... .+...+.+.+.+.||.+.. . .+.+||.+
T Consensus 330 ~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~-~~~~~~~~~~~~~Gl~~~~----~------g~~l~~~P 398 (422)
T PRK05630 330 RKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQP-VDMEEATQAAVDHGVWLRP----F------GRLVYVMP 398 (422)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCc-ccHHHHHHHHHHCCeEEEe----c------CCEEEEEC
Confidence 557777777787777654 222222100 123344444321 2355677788889999852 1 25799999
Q ss_pred CccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+...+ ++|++++++.|++++..
T Consensus 399 pL~it----~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 399 PYITT----SEQIAQICAALAAAVKA 420 (422)
T ss_pred CccCC----HHHHHHHHHHHHHHHhc
Confidence 88888 99999999999999863
No 340
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.40 E-value=2.9e-10 Score=118.26 Aligned_cols=319 Identities=12% Similarity=0.113 Sum_probs=165.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~p 165 (519)
-.|.|.+|+.+.+.+.. . . .+. ++. +....+++.++++...+. ....+||+.|+.+++... ...
T Consensus 70 ~~p~v~~ai~~q~~~~~----~-~-~~~-~~~----~~~la~~L~~~~~~~~~~---v~f~~SGsEA~e~AiklAr~~tg 135 (433)
T PRK00615 70 SHPKICDAIQQGAERGT----S-Y-GLT-SEQ----EILFAEELFSYLGLEDHK---IRFVSSGTEATMTAVRLARGITG 135 (433)
T ss_pred CCHHHHHHHHHHHHhCC----C-C-CCC-CHH----HHHHHHHHHHhCCCCcCE---EEEeCchHHHHHHHHHHHHHhhC
Confidence 47889999888876521 0 0 011 111 222336666777543222 256678888888777654 223
Q ss_pred CCEEEEecCCCcccccccccccCCceeeeeeee----EEE-eeeeCCCC---CCCCHHHHHHHhhhh--CCcEEEEc--c
Q 010058 166 HERIMALDLPHGGHLSHGYQTDTKKISAVSIFF----ETM-PYRLDEST---GYIDYEQLEKSAALF--RPKLIVAG--A 233 (519)
Q Consensus 166 GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~----~~v-~~~~d~~~---~~iD~d~l~~~i~~~--k~klIi~~--~ 233 (519)
..+|+...-.|-|..... .. .+.+.+... ... +-...+.. ..-|++++++.+.++ +..+|++. .
T Consensus 136 r~~ii~~~~~yHG~td~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~ 211 (433)
T PRK00615 136 RSIIIKFLGCYHGHADTL--LQ--GISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPIC 211 (433)
T ss_pred CCEEEEEcCccCCCCccc--Cc--ccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCC
Confidence 356776654332221000 00 011111000 000 00000000 012688888888642 45577776 3
Q ss_pred cccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccC-CCcceEEeecccc
Q 010058 234 SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRG-PRGAMIFFRKGVK 305 (519)
Q Consensus 234 sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~G-prgG~i~~~~~~~ 305 (519)
++.|...+ +++|+++|++||+++|+|++|. |+ ..+.. ..-++ ..|++++ .|.|+| ..+|++++++
T Consensus 212 ~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~-R~G~~ga~~~~gv~PDi~~~--gK~lggG~p~~av~~~~--- 284 (433)
T PRK00615 212 ANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GF-RVAQGGAAAIYHVKPDITVY--GKILGGGLPAAAVVAHK--- 284 (433)
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cc-cccHhHHHHhcCCCCCeEEE--cccccCCcceeeeeecH---
Confidence 33454444 5699999999999999999984 55 11110 00001 3588876 499864 4578888888
Q ss_pred cccccCcchhhhHHHHhhh--cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh----cCCEE
Q 010058 306 EINKQGQEVMYAYEDKINQ--AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE----RGYDL 379 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~--~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~ 379 (519)
++.+.+.. ..+.+...+.+....++..++++.+.+.. ..+++.++.++|.+.|++ .|+.+
T Consensus 285 -----------~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v 350 (433)
T PRK00615 285 -----------SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPV 350 (433)
T ss_pred -----------HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 55554421 11111111234455666666777765433 355666666666555544 46553
Q ss_pred ecCCCCcceeeeeccCCC---C------c---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHH
Q 010058 380 VSGGTENHLVLVNLRNKG---I------D---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEED 447 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~---~------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~d 447 (519)
...+ ...+.-+.+.... + + ...+...|.++||.+. |.... ...+ ....+ ++|
T Consensus 351 ~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~~~~---~~~l----s~~ht----~~d 414 (433)
T PRK00615 351 SLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLS----PSPFE---ASFL----SSAHS----MEN 414 (433)
T ss_pred EEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeec----Ccccc---ccce----ecCCC----HHH
Confidence 2211 1223333332111 0 1 1246667778999985 22110 0122 22234 899
Q ss_pred HHHHHHHHHHHHHH
Q 010058 448 FEKVAEFFDAAVKL 461 (519)
Q Consensus 448 i~~l~~~l~~~l~~ 461 (519)
++++++++.+++..
T Consensus 415 id~~~~a~~~~~~~ 428 (433)
T PRK00615 415 LDYAQNVLIDSLEK 428 (433)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999874
No 341
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.40 E-value=8.1e-11 Score=113.07 Aligned_cols=342 Identities=19% Similarity=0.197 Sum_probs=203.5
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL 163 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all 163 (519)
+.+.++..-..||.. . .|.|.|+| ....|. +.+++.||.+. .+-.+-|-.|-...+..++
T Consensus 56 GTgams~~qwaamm~---G--DEAYagsr------s~~~L~----~avkdifGfq~-----~iPthQGRgAE~Il~~i~i 115 (471)
T COG3033 56 GTGAMTDKQWAAMMR---G--DEAYAGSR------SYYALA----DAVKDIFGFQY-----TIPTHQGRGAENILIPILI 115 (471)
T ss_pred CcccccHHHHHHHhc---c--chhhcccc------cHHHHH----HHHHHhcCcee-----eeeccCCccHHHHHHHHHh
Confidence 344556555555432 1 22344443 334455 67778999876 2555667667665667777
Q ss_pred CCCCEEEEe--cCCCcccccccccccCCceeeeeeeeEEEeee--eC-----CCCCCCCHHHHHHHhhhh---CCcEEEE
Q 010058 164 KPHERIMAL--DLPHGGHLSHGYQTDTKKISAVSIFFETMPYR--LD-----ESTGYIDYEQLEKSAALF---RPKLIVA 231 (519)
Q Consensus 164 ~pGD~Vl~~--~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~--~d-----~~~~~iD~d~l~~~i~~~---k~klIi~ 231 (519)
++|+.+... ....+.|+...-. .+...|..++-++.+ .| |=.+.+|++.+++.|.+. +.-.|++
T Consensus 116 k~~~~~pg~~~~~~sN~~FdTTr~----h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~ 191 (471)
T COG3033 116 KKGEQEPGSKMVAFSNYHFDTTRG----HIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVL 191 (471)
T ss_pred hhccccCCccccccccceecchhH----HHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEE
Confidence 776665541 1122344432211 112223333222211 01 113689999999999864 3445666
Q ss_pred c-ccc--cc---ccccHHHHHHHHhhcCCEEEehhhhhhhccc------cCCCCCC--------CCCCeEEEEcCCCccc
Q 010058 232 G-ASA--YA---RLYDYARIRKVCDKQKAVMLADMAHISGLVA------AGVIPSP--------FEYADVVTTTTHKSLR 291 (519)
Q Consensus 232 ~-~sn--~g---~~~d~~~i~~ia~~~~~~livD~ah~~g~~~------~~~~~~p--------~~~~di~~~S~~K~l~ 291 (519)
. .+| -| ...+++++.+||++|++.++.|++..+.--. .+...+. +.|+|-++.|.-|--.
T Consensus 192 tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~l 271 (471)
T COG3033 192 TITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGL 271 (471)
T ss_pred EEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccce
Confidence 5 334 34 3446789999999999999999886543111 1222222 2389999999999655
Q ss_pred CCCcceEEeecccccccccCcchhhhHHHHhhhc--ccCC--CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHH
Q 010058 292 GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--VFPG--LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSK 367 (519)
Q Consensus 292 GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~~~--~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~ 367 (519)
.+-||+++.+++.. +++....... +..| ..|+..--.+.+++++|.+.... .|.++..+..++
T Consensus 272 vnmGGfl~~~D~~~----------fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~---~yl~~Rv~Qv~Y 338 (471)
T COG3033 272 VNMGGFLCFKDDSF----------FDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNF---DYLAHRVAQVQY 338 (471)
T ss_pred eccccEEEecCccH----------HHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCc---HHHHHHHHHHHH
Confidence 67789999998510 0222222111 1111 12666666778888998876653 345666777889
Q ss_pred HHHHHHhcCCEEecCCCCcceeeeeccC-------CCCcHHHHHHhh-cccCeEEcc-cc--cCCCC-C----CCCCCeE
Q 010058 368 FARSLLERGYDLVSGGTENHLVLVNLRN-------KGIDGSRVEKVL-ESVHIAANK-NT--VPGDV-S----AMVPGGI 431 (519)
Q Consensus 368 l~~~L~~~g~~~~~~~~~~~~~~v~~~~-------~~~~~~~~~~~L-~~~gI~v~~-~~--~p~~~-~----~~~~~~i 431 (519)
|.+.|.+.|++++.+ ...|-+++|... ..+.++.+.-.| .+.||.+.- .. .+.+. . +-...-+
T Consensus 339 L~~~l~~~GVpi~~p-aGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elv 417 (471)
T COG3033 339 LADGLEEAGVPIVQP-AGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELV 417 (471)
T ss_pred HHHHHHhcCCeeEec-CCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchhee
Confidence 999999999988765 346777777432 123455554444 568887642 11 12221 1 1122469
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhc
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIK 466 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~ 466 (519)
|+..+--+ .+.+.|+.+++.++++.++..+|+
T Consensus 418 RltipRrt---Yt~~HmD~V~~a~~~l~e~~~~ik 449 (471)
T COG3033 418 RLTIPRRT---YTQTHMDFVIEAFKALKENAEDIK 449 (471)
T ss_pred eEeccccc---cchhHHHHHHHHHHHHHhccccCC
Confidence 99876533 347999999999999999876665
No 342
>PRK05965 hypothetical protein; Provisional
Probab=99.39 E-value=3.8e-10 Score=118.60 Aligned_cols=215 Identities=14% Similarity=0.081 Sum_probs=127.2
Q ss_pred HHHHHHhhh---hCCcEEEEcccc--ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEE
Q 010058 215 EQLEKSAAL---FRPKLIVAGASA--YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVV 282 (519)
Q Consensus 215 d~l~~~i~~---~k~klIi~~~sn--~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~ 282 (519)
+++++.+.. .+..+|++.|-. .|. ..-+++++++|++||+++|+|+.+. |+-..|.. ..-++ ..|++
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 280 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT-GFGRTGPLFACEAEGVVPDLM 280 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-cCccCchhhhHhhcCCCCCeE
Confidence 567777753 245677776432 332 2237899999999999999999864 22111100 00000 36999
Q ss_pred EEcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhhhc------ccCCCCCCccHHHHHHHHHHHHHhcCHhH
Q 010058 283 TTTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------VFPGLQGGPHNHTISGLAVALKQVKTPEY 354 (519)
Q Consensus 283 ~~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~~~~~~g~~~~~~iaal~~al~~~~~~~~ 354 (519)
+++ |.|+|. ..|.+++++ ++.+.+... ...+...+.+....++..+.++.+.++
T Consensus 281 ~~g--Kgl~gG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~-- 342 (459)
T PRK05965 281 TVA--KGLTSGYVPMGAVLMSD--------------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEG-- 342 (459)
T ss_pred Eec--hhhccCCcceeEEEEcH--------------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhc--
Confidence 997 998654 457777877 455444321 111112223344444444556666543
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCEEecCCC-CcceeeeeccCC-----CCc-----HHHHHHhhcccCeEEcccccCCC
Q 010058 355 KAYQEQVLSNSSKFARSLLER-GYDLVSGGT-ENHLVLVNLRNK-----GID-----GSRVEKVLESVHIAANKNTVPGD 422 (519)
Q Consensus 355 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~v~~~~~-----~~~-----~~~~~~~L~~~gI~v~~~~~p~~ 422 (519)
.+.+++.+.-++|.+.|+++ ...++..-. ...+..+.+... ..+ ...+...+.+.||.+..
T Consensus 343 -~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~------ 415 (459)
T PRK05965 343 -GLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRA------ 415 (459)
T ss_pred -cHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEe------
Confidence 45667778888888888775 222222111 112233333211 001 23466667789999862
Q ss_pred CCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 423 VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 423 ~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.+...||+.++...+ ++|++++++.|.+++...
T Consensus 416 ---~g~~~i~~~PpL~it----~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 416 ---FGDGVLGFAPALCCT----EGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ---cCCcEEEEECCCcCC----HHHHHHHHHHHHHHHHHH
Confidence 123569999988888 999999999999999753
No 343
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=3.5e-10 Score=107.57 Aligned_cols=306 Identities=19% Similarity=0.211 Sum_probs=176.2
Q ss_pred CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc---
Q 010058 87 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL--- 163 (519)
Q Consensus 87 ~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all--- 163 (519)
-..|.+.+++.+....-+ ..++-+|. +-..+++ +.+.++||.+. -+-..+|+.|+..++.-.-
T Consensus 75 hchpki~~aLqeq~~kLt---lssrafYn--d~~~~f~----~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wg 140 (427)
T KOG1402|consen 75 HCHPKIIKALQEQADKLT---LSSRAFYN--DVLGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWG 140 (427)
T ss_pred CCCHHHHHHHHHHHhHhh---hhhHHHhh--hhHHHHH----HHHHHhcCcce-----eeecccchhHHHHHHHHHHHHH
Confidence 357888888887765322 11222222 2233344 88999999875 2455678777776554321
Q ss_pred ---C--CCCEEEEec---CCCcccccccccccCCceeeeeee-------------eEEEeeeeCCCCCCCCHHHHHHHhh
Q 010058 164 ---K--PHERIMALD---LPHGGHLSHGYQTDTKKISAVSIF-------------FETMPYRLDESTGYIDYEQLEKSAA 222 (519)
Q Consensus 164 ---~--pGD~Vl~~~---~~~~~~~~~~~~~~~~~v~~~g~~-------------~~~v~~~~d~~~~~iD~d~l~~~i~ 222 (519)
+ |.|+-++.. .-||-.+. .+++++-. +..+|| =|.++++.+++
T Consensus 141 y~~K~ip~nka~il~~~~nFhGrT~~--------ais~s~d~ds~~~fgp~~P~~~~~v~Y--------~d~eale~~l~ 204 (427)
T KOG1402|consen 141 YRKKNIPKNKAKILSAENNFHGRTLG--------AISLSTDPDSWDGFGPFLPGVVDKVPY--------GDAEALEVALK 204 (427)
T ss_pred HhhccCCccceeEEEecccccCceee--------eEEecCCcchhhccCCCCCCcceeecc--------CCHHHHHHHhc
Confidence 2 545433322 11222111 12222111 112222 26788998888
Q ss_pred hhCCcEEEEcccc--ccccc----cHHHHHHHHhhcCCEEEehhhhhhhccccCC-----CCCCCCCCeEEEEcCCCccc
Q 010058 223 LFRPKLIVAGASA--YARLY----DYARIRKVCDKQKAVMLADMAHISGLVAAGV-----IPSPFEYADVVTTTTHKSLR 291 (519)
Q Consensus 223 ~~k~klIi~~~sn--~g~~~----d~~~i~~ia~~~~~~livD~ah~~g~~~~~~-----~~~p~~~~di~~~S~~K~l~ 291 (519)
..+...+++.|-. -|.+. -+++.+++|.+|++++|.|+.|. |+-..|. +.+- ..|++... |.|.
T Consensus 205 ~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env--~PDivilg--KalS 279 (427)
T KOG1402|consen 205 SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENV--RPDIVILG--KALS 279 (427)
T ss_pred CCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhc--CCCeEEEe--cccc
Confidence 7666677665333 34332 38999999999999999999975 3322221 0110 35899887 8776
Q ss_pred CCCc--ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Q 010058 292 GPRG--AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369 (519)
Q Consensus 292 Gprg--G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~ 369 (519)
|.-- ..+++.+ ++...++........|+....... ..++|+.+.+ +++.++....-..|+
T Consensus 280 GG~~Pvsavl~~~--------------~im~~~~pgeHgsTyggNpLg~~v-aiAalevi~e---ekL~era~~lG~~l~ 341 (427)
T KOG1402|consen 280 GGVYPVSAVLADD--------------DIMLNIKPGEHGSTYGGNPLGCAV-AIAALEVIVE---EKLVERAAKLGEILR 341 (427)
T ss_pred CCeeeeEEEEecH--------------HHHhccCCCccccccCCChHHHHH-HHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 5322 3444555 455444443333333333333322 2345665543 556777778888888
Q ss_pred HHHHhc--CC----EEecCCCCcceeeeeccC---CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcccc
Q 010058 370 RSLLER--GY----DLVSGGTENHLVLVNLRN---KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTS 440 (519)
Q Consensus 370 ~~L~~~--g~----~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~tt 440 (519)
..|.++ .+ ..+.+ . ..+..+.+.+ .+.+...++-.|.+.|+... |. ..+.||+..+...+
T Consensus 342 ~~L~~l~~~~p~~v~~VRG-r-Gl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAk----pt-----H~~IiRfaPPL~I~ 410 (427)
T KOG1402|consen 342 DQLNKLQKKFPHVVKEVRG-R-GLLNAIVINPSKTSGQDAWDVCLALKENGLLAK----PT-----HGNIIRFAPPLVIS 410 (427)
T ss_pred HHHHhccccccchhheeec-c-ceEEEEEeccccccchhHHHHHHcccccccccC----CC-----CCCeEEecCCcccC
Confidence 888887 33 22222 1 1223333332 24566677778888999875 32 34689999998888
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 010058 441 RGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 441 rg~~~~di~~l~~~l~~~l~ 460 (519)
++|+++-+++|.+.+.
T Consensus 411 ----e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 411 ----EEDLREGIEAIEKTIA 426 (427)
T ss_pred ----HHHHHHHHHHHHHHhc
Confidence 9999999999988763
No 344
>PRK07678 aminotransferase; Validated
Probab=99.38 E-value=5.9e-10 Score=116.95 Aligned_cols=217 Identities=16% Similarity=0.182 Sum_probs=124.7
Q ss_pred HHHHHhh---hhCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhh-hhcccc--CCCCCCCCCCeEEE
Q 010058 216 QLEKSAA---LFRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAA--GVIPSPFEYADVVT 283 (519)
Q Consensus 216 ~l~~~i~---~~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~--~~~~~p~~~~di~~ 283 (519)
.+++.+. ..++.+|++.|-. .|...+ +++++++|++||+++|+|+.+. .|-... +.....+ ..|+++
T Consensus 201 ~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt 279 (451)
T PRK07678 201 EIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIIT 279 (451)
T ss_pred HHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEE
Confidence 3566664 2256778777432 343322 8999999999999999999974 222110 0110100 369998
Q ss_pred EcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhhhc-----c-cCCCCCCccHHHHHHHHHHHHHhcCHhHH
Q 010058 284 TTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-----V-FPGLQGGPHNHTISGLAVALKQVKTPEYK 355 (519)
Q Consensus 284 ~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-----~-~~~~~g~~~~~~iaal~~al~~~~~~~~~ 355 (519)
++ |.|+|. ..|.+++++ ++.+.+... . ..+.++ .+....++..++++.+.++
T Consensus 280 ~g--K~lggG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~h~~T~~-gnp~~~aaa~a~l~~l~~~--- 339 (451)
T PRK07678 280 MA--KGITSAYLPLSATAVKK--------------EIYEAFKGKGEYEHFRHVNTFG-GNPAACALALKNLEIMENE--- 339 (451)
T ss_pred ee--cccccCCcceeEEEEcH--------------HHHHHHhccCcccccccCCCCC-cCHHHHHHHHHHHHHHHhC---
Confidence 86 998653 457777777 454444321 1 112222 2344444445567766543
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCEEecC--CCCcceeeeeccCCC-----Cc---HHHHHHhhcccCeEEcccccCCCC
Q 010058 356 AYQEQVLSNSSKFARSLLER--GYDLVSG--GTENHLVLVNLRNKG-----ID---GSRVEKVLESVHIAANKNTVPGDV 423 (519)
Q Consensus 356 ~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~v~~~~~~-----~~---~~~~~~~L~~~gI~v~~~~~p~~~ 423 (519)
.+.+++.+..++|.+.|++. ...++.. +. ..+.-+.+.... .+ ...+...|.+.||.+... +..
T Consensus 340 ~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~---g~~ 415 (451)
T PRK07678 340 NLIERSAQLGELLLEQLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKN---GDT 415 (451)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeec---Ccc
Confidence 34566777777777777543 2222211 11 123333332110 01 234666777899998521 110
Q ss_pred CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 424 SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 424 ~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+...+.||++++...| ++|++++++++.+++..
T Consensus 416 v~~~~~~lrl~Ppl~it----~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 416 VAGYNNVLTLSPPLVIS----SEEIAFIVGTLKTALER 449 (451)
T ss_pred ccCCCCEEEEECCCcCC----HHHHHHHHHHHHHHHHh
Confidence 11223679999998888 89999999999998863
No 345
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.38 E-value=5.6e-11 Score=120.65 Aligned_cols=298 Identities=17% Similarity=0.177 Sum_probs=153.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh---cCCCCEEEEecCCCcccccccccccCCceee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL---LKPHERIMALDLPHGGHLSHGYQTDTKKISA 193 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al---l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~ 193 (519)
++.-+.--.-+..++++.|.+. +|..+..|++ +-.++.++. -+.+++|+++...|+.+... -.++. ..
T Consensus 106 QG~Lq~lfe~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v-~~t~a---~~ 177 (429)
T PF02347_consen 106 QGRLQALFEYQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAV-LRTYA---AP 177 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHH-HHHHC---CH
T ss_pred HHHHHHHHHHHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHH-HHHhh---hh
Confidence 4444444456799999999987 4667777776 344444444 23346999998777666531 11111 12
Q ss_pred eeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC
Q 010058 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI 272 (519)
Q Consensus 194 ~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~ 272 (519)
.|..+..+ +.+ +++..| . .++.+|++..+| +|...|+++|.+++|++|+++++ .+. ..+.+..
T Consensus 178 ~g~~iv~~--~~~-~~~~~d--------~-~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad---~~aL~~l 241 (429)
T PF02347_consen 178 LGIEIVEV--PLD-EDGTTD--------D-DDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GAD---PNALGGL 241 (429)
T ss_dssp CCEEEEEE---BB-TTCSB---------S-TTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGG---CCGCCTC
T ss_pred CCeEEEEe--ccc-ccCCcc--------c-cCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecC---HHHHhCc
Confidence 24334444 444 345555 3 378888888555 89999999999999999999987 543 2333333
Q ss_pred CCCCC-CCeEEEEcCCCcc------cCCCcceEEeeccc-cccc--cc-------Ccc-h---hhhHHHHhhhcccCCCC
Q 010058 273 PSPFE-YADVVTTTTHKSL------RGPRGAMIFFRKGV-KEIN--KQ-------GQE-V---MYAYEDKINQAVFPGLQ 331 (519)
Q Consensus 273 ~~p~~-~~di~~~S~~K~l------~GprgG~i~~~~~~-~~~~--~~-------g~~-~---~~~~~~~i~~~~~~~~~ 331 (519)
..|-+ ++||+++. ||+| +||..|++.+++.+ +..| +. |.. . ...-.+.|++..-....
T Consensus 242 ~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNI 320 (429)
T PF02347_consen 242 KSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNI 320 (429)
T ss_dssp --GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT--
T ss_pred CChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhh
Confidence 33333 79999665 8876 45555999999875 3333 22 221 0 11222233332222222
Q ss_pred CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccC
Q 010058 332 GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVH 411 (519)
Q Consensus 332 g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~g 411 (519)
++.+.......+.-+..+...++++..++...++.++++.|.+. +.+...+..-+-.++.. ..+....++.+.+...|
T Consensus 321 ctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~~~~~~f~e~v~~~-~~~~~~~~l~~~~~~~g 398 (429)
T PF02347_consen 321 CTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLPFDNPFFFEFVVVF-SKDKEVEELLKRGIEGG 398 (429)
T ss_dssp -SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBECSSSSSBSSEEEEE-SS-HHHHHHHHTT----
T ss_pred hhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCceeeeeec-CCcHHHHHHHHHHHhcC
Confidence 22222211122233445566789999999999999999999997 22222211111112222 21112223444444566
Q ss_pred eEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 412 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 412 I~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
+... .+. .+.+-+++...++ .+|++.+++++
T Consensus 399 l~~~---~~~------~~~~li~~TE~~t----~edid~lv~~f 429 (429)
T PF02347_consen 399 LNLR---YPD------DGALLICVTETRT----KEDIDRLVEAF 429 (429)
T ss_dssp EEEG---GG-------SSEEEEE--TT------HHHHHHHHH--
T ss_pred CCcc---ccC------CCeEEEEccCCCC----HHHHHHHHhcC
Confidence 5553 122 2368888888888 89999999875
No 346
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.37 E-value=8.6e-11 Score=119.22 Aligned_cols=210 Identities=16% Similarity=0.192 Sum_probs=128.0
Q ss_pred CHHHHHHHhhhhC---CcEEEEcccc---cccc----ccHHHHHHHHhhcCCEEEehhhhhhhccc---------cCCCC
Q 010058 213 DYEQLEKSAALFR---PKLIVAGASA---YARL----YDYARIRKVCDKQKAVMLADMAHISGLVA---------AGVIP 273 (519)
Q Consensus 213 D~d~l~~~i~~~k---~klIi~~~sn---~g~~----~d~~~i~~ia~~~~~~livD~ah~~g~~~---------~~~~~ 273 (519)
..++|++.+.++. ..++|+.|-. -|.. .-++++++||++||+++|+|+. +.|.-. .++
T Consensus 199 ~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~~FA~e~~gi-- 275 (449)
T COG0161 199 AADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTGKMFACEHAGI-- 275 (449)
T ss_pred HHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCchhhhhhhcCC--
Confidence 3677888887744 3455555322 2322 2389999999999999999997 333221 222
Q ss_pred CCCCCCeEEEEcCCCcccCCCc--ceEEeecccccccccCcchhhhHHHHhhh----cccCCCCCCccHHHHHHHHHHHH
Q 010058 274 SPFEYADVVTTTTHKSLRGPRG--AMIFFRKGVKEINKQGQEVMYAYEDKINQ----AVFPGLQGGPHNHTISGLAVALK 347 (519)
Q Consensus 274 ~p~~~~di~~~S~~K~l~Gprg--G~i~~~~~~~~~~~~g~~~~~~~~~~i~~----~~~~~~~g~~~~~~iaal~~al~ 347 (519)
..|+++.+ |.|+|.-. |.+++++ ++.+.+.. ..+.+...+-|...-++..+.|+
T Consensus 276 ----~PDi~~~a--KGLT~GY~Pl~a~l~~~--------------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~ 335 (449)
T COG0161 276 ----VPDILCLA--KGLTGGYLPLSAVLTSD--------------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLD 335 (449)
T ss_pred ----CCCeeeec--ccccccchhhHhHhhhH--------------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHH
Confidence 24899888 98876433 5555665 33333322 22333332223322222223344
Q ss_pred HhcCHhHHHHHHHHHHHHHHHHHHHHh-c-CCEEecCC-CCcceeeeeccCC-C-Cc------HHHHHHhhcccCeEEcc
Q 010058 348 QVKTPEYKAYQEQVLSNSSKFARSLLE-R-GYDLVSGG-TENHLVLVNLRNK-G-ID------GSRVEKVLESVHIAANK 416 (519)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-~~~~~~~v~~~~~-~-~~------~~~~~~~L~~~gI~v~~ 416 (519)
.+.+ +...+++++...+|.+.|++ + +.+.+.+- .-..+.-+.+... + .. +..+.+.+.+.|+.++
T Consensus 336 i~e~---e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iR- 411 (449)
T COG0161 336 ILEE---EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIR- 411 (449)
T ss_pred HHHh---cCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEe-
Confidence 4333 45678888889999999987 2 33344431 1122333444321 1 11 4567778889999998
Q ss_pred cccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 417 NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 417 ~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
|. ...+=++++...| ++|++++++.+.+++...
T Consensus 412 ---p~------g~~i~~~PPliit----~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 412 ---PL------GDVIYLMPPLIIT----REEIDELVDALREALDET 444 (449)
T ss_pred ---ec------CCEEEEcCCccCC----HHHHHHHHHHHHHHHHHH
Confidence 33 2368888888888 899999999999999754
No 347
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.37 E-value=7.7e-10 Score=116.34 Aligned_cols=330 Identities=14% Similarity=0.118 Sum_probs=169.0
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~p 165 (519)
-.|.|.+|+.+.+.+.. +.+...+ ..+.+....+++.+++...... .-...+||+.|+.+++... ...
T Consensus 71 ~~p~v~~ai~~q~~~~~---~~~~~~~-----~~~~~~~la~~L~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tg 140 (451)
T PRK06918 71 SHPKVKEALHKQVDQYI---HTGFNVM-----MYEPYIELAEKLAALAPGSFDK--KVLFLNSGAEAVENAVKIARKYTK 140 (451)
T ss_pred CCHHHHHHHHHHHHhcc---Ccccccc-----ccHHHHHHHHHHHHhCCCCCCC--EEEEcCCcHHHHHHHHHHHHHHhC
Confidence 37899999998877521 1111111 1122233446777777533211 1256677887888777644 233
Q ss_pred CCEEEEecCCC-cccccccccccCCc-eee-ee---eeeEEEeeeeC--CCCCCCC-------HHHHHHHhh----hhCC
Q 010058 166 HERIMALDLPH-GGHLSHGYQTDTKK-ISA-VS---IFFETMPYRLD--ESTGYID-------YEQLEKSAA----LFRP 226 (519)
Q Consensus 166 GD~Vl~~~~~~-~~~~~~~~~~~~~~-v~~-~g---~~~~~v~~~~d--~~~~~iD-------~d~l~~~i~----~~k~ 226 (519)
..+|+...-.| |.+........... ... .+ ..+..+|++.. ...+..+ ++.+++.+. ..+.
T Consensus 141 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 220 (451)
T PRK06918 141 RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETI 220 (451)
T ss_pred CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCce
Confidence 45677665433 32211110000000 000 00 01122333210 0001000 223444332 2256
Q ss_pred cEEEEcccc--ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC----CCeEEEEcCCCcc-cCCCc
Q 010058 227 KLIVAGASA--YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE----YADVVTTTTHKSL-RGPRG 295 (519)
Q Consensus 227 klIi~~~sn--~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~----~~di~~~S~~K~l-~Gprg 295 (519)
.+|++.|-. .|. ...+++|+++|++||+++|+|+.+. |+...+.. .++. ..|++++ +|++ +|.|.
T Consensus 221 Aavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~t-g~gr~g~~-~a~~~~~v~pDi~t~--sK~l~~G~pi 296 (451)
T PRK06918 221 AAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQT-GFARTGKY-FAIEHFDVVPDLITV--SKSLGAGVPI 296 (451)
T ss_pred EEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CcCccCce-ehhHhcCCCCCEEee--ehhhcCCCcc
Confidence 677776433 232 2228899999999999999999853 33222211 1111 2577755 5887 46777
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
|++++++ ++.+.+.........++ +....++..++++.+.+..+ .+++.+..+.+.+.|+++
T Consensus 297 g~v~~~~--------------~i~~~~~~~~~~~T~~g-~~l~~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~l 358 (451)
T PRK06918 297 SGVIGRK--------------EIMDESAPGELGGTYAG-SPLGCAAALAVLDIIEKENL---NDRAIELGKVVMNRFEEM 358 (451)
T ss_pred EEEEEcH--------------HHHhccCCCCcCcCCCc-CHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHH
Confidence 9999987 55554433222222333 33334444445666544333 444555556666666554
Q ss_pred --CCEE---ecCCCCcceeeeecc-CC--CC----cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 376 --GYDL---VSGGTENHLVLVNLR-NK--GI----DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 376 --g~~~---~~~~~~~~~~~v~~~-~~--~~----~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
++.. +.+ . ..+..+.+. +. .. ....+.+.|.+.||.+. |+.. ..+.+||+++...+
T Consensus 359 ~~~~~~~~~vrg-~-G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~----~~~~---~~~~lrl~p~l~~t--- 426 (451)
T PRK06918 359 KNKYNCIGDVRG-L-GAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLL----SAGT---YGNVIRVLMPLVIT--- 426 (451)
T ss_pred HhhCCCceeecc-c-eeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEe----ecCC---CCCEEEEECCCccC---
Confidence 2322 222 2 223333332 11 01 13345566678999985 4321 13679999887666
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~~ 462 (519)
+++++++++.|.+++...
T Consensus 427 -~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 427 -DEQLEEGLTIIEESLQAC 444 (451)
T ss_pred -HHHHHHHHHHHHHHHHHH
Confidence 899999999999999754
No 348
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.37 E-value=4.5e-10 Score=110.95 Aligned_cols=293 Identities=16% Similarity=0.150 Sum_probs=182.1
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-cCC--CCEEEEecCCCcccccccccccCCceeeeeeeeEEEe
Q 010058 127 CQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-LKP--HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMP 202 (519)
Q Consensus 127 ~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-l~p--GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~ 202 (519)
-+..++++.|.+. +|-...-+++ +-.++.++. +.. ..+++++...|+.++.-.. + .+.|..++.+-
T Consensus 125 fQtlv~dLTGm~V----ANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~-T-----ra~~~g~~i~~ 194 (450)
T COG0403 125 FQTLVADLTGLDV----ANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLR-T-----RAEGLGIEIEV 194 (450)
T ss_pred HHHHHHHHhCCCc----ccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHH-h-----hcccCceEEEE
Confidence 4678889999987 4677777777 566666665 333 6899998877776654221 1 12233333332
Q ss_pred eeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-cc-ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CC
Q 010058 203 YRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YA-RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YA 279 (519)
Q Consensus 203 ~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g-~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~ 279 (519)
++.+ |.+++++. .+..+-.+++.++| +| ...|+.+|.+++|++|+++++= +..++.++...|-+ ++
T Consensus 195 ~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~----aDplaL~LL~pPGe~GA 263 (450)
T COG0403 195 VDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVA----ADPLALGLLKPPGEFGA 263 (450)
T ss_pred eccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEE----echhHhhccCCccccCC
Confidence 2222 77888877 44367788888666 88 7778999999999999988763 22333444444444 79
Q ss_pred eEEEEcCCC-----cccCCCcceEEeeccc-cccc--ccCcc------hh-----hhHHHHhhhcccCCCCCCccHHHHH
Q 010058 280 DVVTTTTHK-----SLRGPRGAMIFFRKGV-KEIN--KQGQE------VM-----YAYEDKINQAVFPGLQGGPHNHTIS 340 (519)
Q Consensus 280 di~~~S~~K-----~l~GprgG~i~~~~~~-~~~~--~~g~~------~~-----~~~~~~i~~~~~~~~~g~~~~~~ia 340 (519)
||++++++- +++||..|+..++++. +..| +.|.+ .. ..-++.|++..-.....| +..+.
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICT--nQaLl 341 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICT--NQALL 341 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhH--HHHHH
Confidence 999999986 4678888999999875 3444 33322 11 122333433322221122 22333
Q ss_pred HHHHH--HHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcc
Q 010058 341 GLAVA--LKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANK 416 (519)
Q Consensus 341 al~~a--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~ 416 (519)
|++++ .-+....+++++.+++.+.+.+++++|++. |+.++.. .++--+.++........+.+.....||.++.
T Consensus 342 A~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~---~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~ 418 (450)
T COG0403 342 ALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD---HFFDTFTVRVPEEVAEALLAAAIAGGINLRR 418 (450)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc---cceeeEEEecchhHHHHHHHHHHhcCCceee
Confidence 33333 335567789999999999999999999966 5877653 2333333332111123333444456777752
Q ss_pred cccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 417 NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 417 ~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
.....+=++....++ .+|++.+++++...
T Consensus 419 ---------~~~~~~~ia~tEt~t----~~~i~~l~~~~~~~ 447 (450)
T COG0403 419 ---------VDADTVLIALTETTT----KEDIDALVAAFGGV 447 (450)
T ss_pred ---------ecCCceEEEeecccC----HHHHHHHHHHHhhh
Confidence 112356677777777 89999999888654
No 349
>PRK07046 aminotransferase; Validated
Probab=99.37 E-value=6.2e-10 Score=116.61 Aligned_cols=325 Identities=13% Similarity=0.119 Sum_probs=173.0
Q ss_pred cCeeecCCCCC-----CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en~-----~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+-.. -.|.|.+|+.+.+......+. .+ +.+....+++.++++.+. -.+.+||
T Consensus 76 ~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~-------~~----~~~~~lAe~l~~~~~~~~-----v~F~nSG 139 (453)
T PRK07046 76 RYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTML-------PS----EDAAWVGEELARRFGLPY-----WQVATTA 139 (453)
T ss_pred EEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCC-------CC----HHHHHHHHHHHHHhCCCE-----EEEECCH
Confidence 34666544322 368999999988876321111 11 223334467777776443 2666778
Q ss_pred HHHHHHHHHhh--cCCCCEEEEecCCCccccccccc--ccCCc---eeeeeeee----EEEeeeeCCCCCCCCHHHHHHH
Q 010058 152 SPANFQVYTAL--LKPHERIMALDLPHGGHLSHGYQ--TDTKK---ISAVSIFF----ETMPYRLDESTGYIDYEQLEKS 220 (519)
Q Consensus 152 s~a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~--~~~~~---v~~~g~~~----~~v~~~~d~~~~~iD~d~l~~~ 220 (519)
+.|+..++... ....++|+...-.|-|....... ..... ....|... ..+.++ .-|++++++.
T Consensus 140 tEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~ 213 (453)
T PRK07046 140 TDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------FNDLAALEAA 213 (453)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------CCCHHHHHHH
Confidence 88888777654 23456788776443222100000 00000 00001100 001111 1278999988
Q ss_pred hhhhCCcEEEEccc--ccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CCeEEEEcCCCcccC-
Q 010058 221 AALFRPKLIVAGAS--AYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRG- 292 (519)
Q Consensus 221 i~~~k~klIi~~~s--n~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~S~~K~l~G- 292 (519)
+...+..+|++.|- +.|...+ +++++++|+++|+++|+|+.+..+.-..+... -++ ..|+++++ |.|+|
T Consensus 214 l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~-~~gv~PDi~t~g--K~lggG 290 (453)
T PRK07046 214 LADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTR-AHGLEPDFLVVG--KPIAGG 290 (453)
T ss_pred hCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhH-HhCCCccceeeh--hhhcCC
Confidence 86446778888743 2343322 79999999999999999999852211111110 001 35898875 98864
Q ss_pred CCcceEEeecccccccccCcchhhhHHHHhhhc--------c-cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Q 010058 293 PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--------V-FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLS 363 (519)
Q Consensus 293 prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--------~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~ 363 (519)
...|.+++++ ++.+.+... . ..+.. +.+....++..+.++.+.+++ ..++..+
T Consensus 291 ~Pi~av~g~~--------------~i~~~~~~~~~~~~~~~~~~~~T~-~gnpl~~aa~~a~L~~l~~~~---~~~~~~~ 352 (453)
T PRK07046 291 VPCAVYGFSA--------------ELAERAQAAKASAPPGHSGIGTTL-SANALAMAAMRATLAEVMTEA---AYAHMLA 352 (453)
T ss_pred CcceeeeehH--------------HHHHHHhhccccCCCCCceeCCCC-cccHHHHHHHHHHHHHHhccc---HHHHHHH
Confidence 3458888887 555544321 0 11111 224444555556677665433 3555566
Q ss_pred HHHHHHHHHHh----cCCEEecCCCCcceeeeeccCCC----------Cc---HHHHHHhhcccCeEEcccccCCCCCCC
Q 010058 364 NSSKFARSLLE----RGYDLVSGGTENHLVLVNLRNKG----------ID---GSRVEKVLESVHIAANKNTVPGDVSAM 426 (519)
Q Consensus 364 ~~~~l~~~L~~----~g~~~~~~~~~~~~~~v~~~~~~----------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~ 426 (519)
.-++|.+.|++ .++.....+... ++.+.+.... .+ ...+...|.+.||.+. |.
T Consensus 353 ~g~~l~~~L~~l~~~~~~~~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~----~~----- 422 (453)
T PRK07046 353 LAARLAAGLRAVIARHGLPWHVTRVGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLIT----PF----- 422 (453)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEe----cc-----
Confidence 66666666654 354322111111 2222221110 01 1234455667899985 21
Q ss_pred CCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 427 VPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 427 ~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+.++++++ .+ ++|++++++++.+++..
T Consensus 423 -~~~~~~~p~--~t----~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 423 -HNMMLVCPA--TT----AADVDRLVAAFDACLGE 450 (453)
T ss_pred -cCcEEEeCC--CC----HHHHHHHHHHHHHHHHH
Confidence 134788754 45 89999999999999864
No 350
>PRK07480 putative aminotransferase; Validated
Probab=99.36 E-value=5.6e-10 Score=117.13 Aligned_cols=212 Identities=14% Similarity=0.156 Sum_probs=121.6
Q ss_pred HHHHHHhhh---hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC---CCCCCC-CCeE
Q 010058 215 EQLEKSAAL---FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV---IPSPFE-YADV 281 (519)
Q Consensus 215 d~l~~~i~~---~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~---~~~p~~-~~di 281 (519)
+.+++.+.+ .+..+|++.|-. .|...+ +++++++|++||+++|+|+.+. |+-..+. ... ++ ..|+
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~-~gv~PDi 283 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVIC-GFGRTGEWFGSQH-FGIKPDL 283 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhhhhh-cCCCCCe
Confidence 566655532 245677776432 343333 8999999999999999999974 2211110 000 01 3588
Q ss_pred EEEcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhh--hcc-cCCCCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 282 VTTTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKIN--QAV-FPGLQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 282 ~~~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~--~~~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
++++ |.|+|. ..|.+++++ ++.+.+. ... ..+...+-+....++..++|+.+.+++
T Consensus 284 v~~g--K~l~gG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~--- 344 (456)
T PRK07480 284 MTIA--KGLTSGYIPMGAVGVGD--------------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEG--- 344 (456)
T ss_pred eeee--hhhccCCccceEEEEcH--------------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCC---
Confidence 8886 998763 356666676 4544441 111 111122234455555556777665433
Q ss_pred HHHHH-HHHHHHHHHHHHhc-CCEEecC--CCCcceeeeeccCC-C----C-c----HHHHHHhhcccCeEEcccccCCC
Q 010058 357 YQEQV-LSNSSKFARSLLER-GYDLVSG--GTENHLVLVNLRNK-G----I-D----GSRVEKVLESVHIAANKNTVPGD 422 (519)
Q Consensus 357 ~~~~~-~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~-~----~-~----~~~~~~~L~~~gI~v~~~~~p~~ 422 (519)
..+++ .+..++|.+.|+++ ...++.. +. ..+.-+.+... . . + ...+...+.+.||.+. +.
T Consensus 345 l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~----~~- 418 (456)
T PRK07480 345 IVERVRDDTGPYLQKRLRELADHPLVGEVRGV-GLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMR----AV- 418 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEee-cceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEe----ec-
Confidence 44555 35666666666553 2222211 11 12333333211 0 0 1 2345566778999985 21
Q ss_pred CCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 423 VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 423 ~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.+.+|+.++...+ ++|++++++.|.+++...
T Consensus 419 -----~~~l~~~Ppl~it----~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 419 -----GDRMIISPPLVIT----HAEIDELVEKARKALDAT 449 (456)
T ss_pred -----CCEEEEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 2469999887777 899999999999999753
No 351
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.36 E-value=3.7e-10 Score=118.66 Aligned_cols=328 Identities=16% Similarity=0.129 Sum_probs=174.9
Q ss_pred CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc---
Q 010058 87 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL--- 163 (519)
Q Consensus 87 ~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all--- 163 (519)
.-.|.|.+|+.+.+.+ . .+.....+ .++. +....+++.+++....+. ....+||+.|+.+++....
T Consensus 72 h~~p~v~~Ai~~ql~~-l--~~~~~~~~-~~~~----~~~lae~L~~~~p~~~~~---v~f~~SGseAve~AlklAr~~~ 140 (460)
T PRK06916 72 HQVPELDEAIREQLNK-I--AHSTLLGL-ANVP----SILLAEKLIEVVPEGLKK---VFYSDSGATAVEIAIKMAFQYW 140 (460)
T ss_pred CCCHHHHHHHHHHHHh-C--CCcccccc-CCHH----HHHHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 3478999999988875 2 11111111 1222 223336777776533222 3666788888887776432
Q ss_pred ----CC-CCEEEEecCCCcc-cccccccccCCcee--eee--eeeEEEeeee--C-CCCC------CCCHHHHHHHhhh-
Q 010058 164 ----KP-HERIMALDLPHGG-HLSHGYQTDTKKIS--AVS--IFFETMPYRL--D-ESTG------YIDYEQLEKSAAL- 223 (519)
Q Consensus 164 ----~p-GD~Vl~~~~~~~~-~~~~~~~~~~~~v~--~~g--~~~~~v~~~~--d-~~~~------~iD~d~l~~~i~~- 223 (519)
.+ ..+|+.....|-| +............. +.. .....+|++. . +... .-+++.+++.+..
T Consensus 141 ~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 220 (460)
T PRK06916 141 QNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK 220 (460)
T ss_pred HhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhC
Confidence 23 3577777644322 21100000000000 000 0012232220 0 0000 1235667777753
Q ss_pred -hCCcEEEEccc--c-cccc----ccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccC
Q 010058 224 -FRPKLIVAGAS--A-YARL----YDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRG 292 (519)
Q Consensus 224 -~k~klIi~~~s--n-~g~~----~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~G 292 (519)
.+..+|++.|- . .|.. .-+++++++|+++|+++|+|+.+. |+-..|.. ..-++ ..|+++++ |.|+|
T Consensus 221 ~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~T-G~GRtG~~~a~~~~gv~PDiv~~g--K~l~g 297 (460)
T PRK06916 221 HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVAT-GFGRTGKMFACEHENVTPDIMTAG--KGLTG 297 (460)
T ss_pred CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCcCchhhHHHhcCCCCCeeeee--hhhhc
Confidence 25667777662 2 3322 237899999999999999999974 33111110 00001 35898876 98865
Q ss_pred C--CcceEEeecccccccccCcchhhhHHHHhhh------cccCC-CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Q 010058 293 P--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQ------AVFPG-LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLS 363 (519)
Q Consensus 293 p--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~------~~~~~-~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~ 363 (519)
. ..|.+++++ ++.+.+.. ..+.+ ..++ +....++..++++.+.+. .+.+++.+
T Consensus 298 G~~Pi~av~~~~--------------ei~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~l~~l~~~---~l~~~~~~ 359 (460)
T PRK06916 298 GYLPIAITVTTD--------------EIYNAFYGDYEEQKTFFHGHSYTG-NPLGCAVALANLELYEKT---NLIEQVAR 359 (460)
T ss_pred CccccceeeecH--------------HHHHHhhccccccCccccCCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHH
Confidence 3 357777777 44443321 11222 2233 444455555566665443 35677788
Q ss_pred HHHHHHHHHHhc-CCEEecC--CCCcceeeeeccCC-C------Cc---HHHHHHhhcccCeEEcccccCCCCCCCCCCe
Q 010058 364 NSSKFARSLLER-GYDLVSG--GTENHLVLVNLRNK-G------ID---GSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430 (519)
Q Consensus 364 ~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~-~------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 430 (519)
+.++|.+.|+++ ....+.. +.. -+.-+.+... . .+ ...+...|.+.||.+. |. .+.
T Consensus 360 ~g~~l~~~l~~l~~~~~v~~vrG~G-lm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~----~~------g~~ 428 (460)
T PRK06916 360 KTEYVATQLEDLFALKHVGDIRQLG-LMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTR----PL------GNT 428 (460)
T ss_pred HHHHHHHHHHHhhcCCCeEEeecCC-ceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEE----ec------CCE
Confidence 888888888765 2222221 111 2223333211 0 01 2356677778999985 21 257
Q ss_pred EEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 431 iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+|+.++...+ ++|+++++++|++++..
T Consensus 429 l~~~Ppl~it----~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 429 IVFMPPLAST----IDELDEMLRILYKAISD 455 (460)
T ss_pred EEEeCCcccC----HHHHHHHHHHHHHHHHh
Confidence 9999888788 89999999999999974
No 352
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.36 E-value=9.8e-10 Score=115.19 Aligned_cols=329 Identities=10% Similarity=0.039 Sum_probs=175.3
Q ss_pred CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc---
Q 010058 87 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL--- 163 (519)
Q Consensus 87 ~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all--- 163 (519)
.-.|.|.+|+.+.+.+ . .+.....+. .+ ......+++.++++...+. .....||+.|+.+++....
T Consensus 70 h~~p~v~~Ai~~ql~~-~--~~~~~~~~~-~~----~~~~lAe~L~~~~p~~~~~---v~f~~sGseAve~AlKlA~~~~ 138 (453)
T PRK06943 70 HANPRINAALKDQLDT-L--EHAMLAGCT-HE----PAIELAERLAALTGGTLGH---AFFASDGASAVEIALKMSFHAW 138 (453)
T ss_pred CCCHHHHHHHHHHHHh-c--CCccccccC-CH----HHHHHHHHHHHhCCCCCCE---EEEeCCCHHHHHHHHHHHHHHH
Confidence 3478999999888765 2 111110111 12 2223336777777643222 2555678888887777541
Q ss_pred ----C-CCCEEEEecCCC-cccccccccccCCcee--eee--eeeEEEeeeeCCC--CC-------CCCHHHHHHHhhh-
Q 010058 164 ----K-PHERIMALDLPH-GGHLSHGYQTDTKKIS--AVS--IFFETMPYRLDES--TG-------YIDYEQLEKSAAL- 223 (519)
Q Consensus 164 ----~-pGD~Vl~~~~~~-~~~~~~~~~~~~~~v~--~~g--~~~~~v~~~~d~~--~~-------~iD~d~l~~~i~~- 223 (519)
. ...+|+.....| |.+............. +.. ..+..++++.... .. .-|++++++.+..
T Consensus 139 ~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 218 (453)
T PRK06943 139 RNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER 218 (453)
T ss_pred HHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC
Confidence 1 236788776443 2221111100000000 000 0112233221000 00 1135677777753
Q ss_pred -hCCcEEEEccc--c-ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccC
Q 010058 224 -FRPKLIVAGAS--A-YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRG 292 (519)
Q Consensus 224 -~k~klIi~~~s--n-~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~G 292 (519)
.+..+|++.|- . .|. ..-+++++++|++||+++|.|+.+. |+-..+.. ..-++ ..|+++++ |.|+|
T Consensus 219 ~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-G~GRtG~~fa~~~~gv~PDivt~g--Kgl~g 295 (453)
T PRK06943 219 AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAV-GCGRTGTFFACEQAGVWPDFLCLS--KGISG 295 (453)
T ss_pred CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCCCcchhHHHhCCCCCCeEeee--hhhcc
Confidence 25677777762 2 332 2237999999999999999999864 22111110 00001 36999997 98865
Q ss_pred C--CcceEEeecccccccccCcchhhhHHHHhhhc-----ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHH
Q 010058 293 P--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-----VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNS 365 (519)
Q Consensus 293 p--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-----~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~ 365 (519)
. ..|.+++++ ++.+.+... .+.+...+.+....++..+.|+.+.++ ...+++.+.-
T Consensus 296 G~~Pi~av~~~~--------------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~G 358 (453)
T PRK06943 296 GYLPLSLVLSRD--------------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAED---DVLARNARKS 358 (453)
T ss_pred CcccceEEEEcH--------------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 4 457777877 444443311 111111122444455555567666543 3566777777
Q ss_pred HHHHHHHHhc-CCEEecC--CCCcceeeeeccC-CCCc---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcc
Q 010058 366 SKFARSLLER-GYDLVSG--GTENHLVLVNLRN-KGID---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPAL 438 (519)
Q Consensus 366 ~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~-~~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ 438 (519)
++|.+.|+++ ....+.. +. ..+.-+.+.. .... ...+.+.+.+.||.+. +. .+.+||+++..
T Consensus 359 ~~l~~~L~~l~~~~~v~~vrG~-Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~----~~------g~~l~~~Ppl~ 427 (453)
T PRK06943 359 ARLRAALAPLAAHPQVRHLRQR-GTIFAFDVALDGDAARTFSRRFFEAALERELLLR----PI------GTTVYLMPPYV 427 (453)
T ss_pred HHHHHHHHHHhcCCCEEeEecc-ccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEE----ec------CCEEEEeCCCc
Confidence 7888877765 2222221 11 1233344431 1111 2346667778999985 21 14699999888
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 010058 439 TSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 439 ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.| ++|++++++.|++++..
T Consensus 428 it----~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 428 LD----DDEIAWLAERTRATLDA 446 (453)
T ss_pred CC----HHHHHHHHHHHHHHHHH
Confidence 88 99999999999999974
No 353
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.35 E-value=8.8e-10 Score=115.75 Aligned_cols=328 Identities=15% Similarity=0.156 Sum_probs=172.1
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~p 165 (519)
-.|.|.+|+.+.+.. + .+...+ +. ++... ...++++++++...+. -...+||+.|+.+++... ...
T Consensus 88 ~~p~v~~Ai~~ql~~-~--~~~~~~-~~-~~~~~----~lae~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~tg 155 (459)
T PRK06082 88 GHPHVIEKVKEQMAK-L--PFSPRR-FT-NETAI----ECAEKLTEIAGGELNR---VLFAPGGTSAIGMALKLARHITG 155 (459)
T ss_pred CCHHHHHHHHHHHHh-C--CCccCc-cC-CHHHH----HHHHHHHHhCCCCCCE---EEECCCcHHHHHHHHHHHHHhcC
Confidence 478999999988765 3 221111 11 22222 3337777777533222 255566777888766643 233
Q ss_pred CCEEEEecCC-CcccccccccccCCcee--e--eeeeeEEEeeeeCCC-CC-CC------CHHHHHHHhhh-hCCcEEEE
Q 010058 166 HERIMALDLP-HGGHLSHGYQTDTKKIS--A--VSIFFETMPYRLDES-TG-YI------DYEQLEKSAAL-FRPKLIVA 231 (519)
Q Consensus 166 GD~Vl~~~~~-~~~~~~~~~~~~~~~v~--~--~g~~~~~v~~~~d~~-~~-~i------D~d~l~~~i~~-~k~klIi~ 231 (519)
..+|+...-. ||.+............. + .-..+..++.+.... .+ .. +++.+++.+.. .+..+|++
T Consensus 156 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIv 235 (459)
T PRK06082 156 NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIA 235 (459)
T ss_pred CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEE
Confidence 4677776543 33321111000000000 0 000112222110000 00 01 13557777653 24556666
Q ss_pred cccc-cc-cccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCcccCC--CcceEEee
Q 010058 232 GASA-YA-RLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSLRGP--RGAMIFFR 301 (519)
Q Consensus 232 ~~sn-~g-~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l~Gp--rgG~i~~~ 301 (519)
.+-. .| ...+ +++++++|++||+++|+|++|. |+-..|.. . .-++ ..|+++++ |.|+|. ..|.++++
T Consensus 236 EPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~~P~~av~~~ 312 (459)
T PRK06082 236 EAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILCIG--KGLGGGLVPIAAMITK 312 (459)
T ss_pred CCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEEec--ccccCCCCcceEEEEc
Confidence 6432 23 2333 8999999999999999999976 33111110 0 0001 36899865 998653 35677776
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCEE
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYDL 379 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~ 379 (519)
+ ++..........+..++ +....++..+.++.+.++ ...+++.++.++|.+.|+++ .+.+
T Consensus 313 ~--------------~i~~~~~~~~~~~T~~g-npl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~ 374 (459)
T PRK06082 313 D--------------KYNTAAQISLGHYTHEK-SPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPL 374 (459)
T ss_pred H--------------HHHhhccCCCCCCCCCc-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 6 33332221111122233 344444445567666443 35677788888888888765 2333
Q ss_pred ecC--CCCcceeeeeccCC----CCc---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 380 VSG--GTENHLVLVNLRNK----GID---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 380 ~~~--~~~~~~~~v~~~~~----~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
+.. +. .-+.-+.+... ..+ ...+...+.+.||.+. +. ..+.||++++...+ ++|+++
T Consensus 375 i~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~----~~-----~~~~i~~~Ppl~it----~~eid~ 440 (459)
T PRK06082 375 IGDVRGI-GLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFK----VS-----QGNVIQLSPPLIIT----REELTQ 440 (459)
T ss_pred eeeeeec-cceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEE----ec-----CCCEEEEeCCCccC----HHHHHH
Confidence 322 11 12333333211 011 2345556668999885 21 23679999888778 899999
Q ss_pred HHHHHHHHHHHH
Q 010058 451 VAEFFDAAVKLA 462 (519)
Q Consensus 451 l~~~l~~~l~~~ 462 (519)
+++++++++...
T Consensus 441 ~~~~l~~~l~~~ 452 (459)
T PRK06082 441 ALAILEEAIAKI 452 (459)
T ss_pred HHHHHHHHHHHH
Confidence 999999999753
No 354
>PRK07482 hypothetical protein; Provisional
Probab=99.34 E-value=6.1e-10 Score=117.11 Aligned_cols=216 Identities=16% Similarity=0.143 Sum_probs=125.8
Q ss_pred CHHHHHHHhhh---hCCcEEEEcccc--cccc----ccHHHHHHHHhhcCCEEEehhhhhhhccccCC--CCCCCC-CCe
Q 010058 213 DYEQLEKSAAL---FRPKLIVAGASA--YARL----YDYARIRKVCDKQKAVMLADMAHISGLVAAGV--IPSPFE-YAD 280 (519)
Q Consensus 213 D~d~l~~~i~~---~k~klIi~~~sn--~g~~----~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~p~~-~~d 280 (519)
+++++++.+.. .+..+|++.|-. .|.. .-+++|+++|++||+++|+|+.+. |+-..+. ...-++ ..|
T Consensus 205 ~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~~~~gv~PD 283 (461)
T PRK07482 205 CADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVT-GFGRLGSMFGSDHYGIEPD 283 (461)
T ss_pred HHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCcchhhHHhcCCCCC
Confidence 46777877742 246777777432 3322 237899999999999999999864 2211110 000001 369
Q ss_pred EEEEcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhhhc------ccCCCCCCccHHHHHHHHHHHHHhcCH
Q 010058 281 VVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------VFPGLQGGPHNHTISGLAVALKQVKTP 352 (519)
Q Consensus 281 i~~~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~~~~~~g~~~~~~iaal~~al~~~~~~ 352 (519)
+++++ |.|+|. ..|.+++++ ++.+.+... ...+...+.+....++..++++.+.++
T Consensus 284 iv~~g--Kgl~gG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~ 347 (461)
T PRK07482 284 LITVA--KGLTSAYAPLSGSIVGE--------------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERE 347 (461)
T ss_pred EEEEc--cccccCccccceeeecH--------------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 99987 998653 346666666 444433211 111111223444455555567766543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc--CCEEecC--CCCcceeeeeccCCC-----Cc-----HHHHHHhhcccCeEEcccc
Q 010058 353 EYKAYQEQVLSNSSKFARSLLER--GYDLVSG--GTENHLVLVNLRNKG-----ID-----GSRVEKVLESVHIAANKNT 418 (519)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~ 418 (519)
...+++.+..++|.+.|+++ ...++.. +. ..+.-+.+.... .+ ...+...|.+.||.++.
T Consensus 348 ---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~-- 421 (461)
T PRK07482 348 ---NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARA-- 421 (461)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEec--
Confidence 34566677777777777654 2222221 11 123334442110 11 24566777789998851
Q ss_pred cCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 419 VPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 419 ~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.| ..+.+|+.++...+ ++|++++++.+.++++.
T Consensus 422 ~~------~~~~i~~~Ppl~it----~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 422 MP------HGDILGFAPPLVLT----RAEADEIVAIAKDAVDE 454 (461)
T ss_pred CC------CCCEEEEeCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 11 13579999888888 99999999999999874
No 355
>PRK06149 hypothetical protein; Provisional
Probab=99.34 E-value=6.2e-10 Score=127.04 Aligned_cols=327 Identities=12% Similarity=0.075 Sum_probs=172.2
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHH---hhcC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYT---ALLK 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~---all~ 164 (519)
-.|.|.+|+.+.+.. . ....+++ .+...+ ..+++++++.-..+. ...++||+.||.+++. +...
T Consensus 600 ~hp~v~~Ai~~q~~~-l---~~~~~~~--~~~~~e----lae~L~~~~p~~~~~---v~f~~SGsEA~e~AlklAr~~tg 666 (972)
T PRK06149 600 GHPRLAAAAARQWSL-L---NTNSRFH--YAAVAE----FSERLAALAPDGLDT---VFLVNSGSEANDLAIRLAWAASG 666 (972)
T ss_pred CCHHHHHHHHHHHHh-c---ccccccc--CHHHHH----HHHHHHHhCCCCcCE---EEEeCCchHHHHHHHHHHHHhcC
Confidence 378999999887764 2 1112221 122222 336777777321221 3677889989998777 3333
Q ss_pred CCCEEEEecC-CCcccccccccccC--Cceeeee---eeeEEEeeeeC-CCCC-CCC-----HHHHHHHhhh-----hCC
Q 010058 165 PHERIMALDL-PHGGHLSHGYQTDT--KKISAVS---IFFETMPYRLD-ESTG-YID-----YEQLEKSAAL-----FRP 226 (519)
Q Consensus 165 pGD~Vl~~~~-~~~~~~~~~~~~~~--~~v~~~g---~~~~~v~~~~d-~~~~-~iD-----~d~l~~~i~~-----~k~ 226 (519)
..+|+..+- .||.+......... ......+ ..+..++++-. ...+ ..| .+++++.+.. .++
T Consensus 667 -r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 745 (972)
T PRK06149 667 -RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGL 745 (972)
T ss_pred -CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCce
Confidence 345666553 34333111000000 0000000 01112221100 0001 011 2344433321 245
Q ss_pred cEEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhh-hhcccc---CCCCCCCCCCeEEEEcCCCcccC-CCc
Q 010058 227 KLIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAA---GVIPSPFEYADVVTTTTHKSLRG-PRG 295 (519)
Q Consensus 227 klIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~---~~~~~p~~~~di~~~S~~K~l~G-prg 295 (519)
.+||+.+ ++-|...+ +++++++|++||+++|+|++|. .|-... +.....+ ..|+++++ |.|+| ...
T Consensus 746 AavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~g--K~lg~G~Pl 822 (972)
T PRK06149 746 AGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITMA--KGMGNGHPL 822 (972)
T ss_pred EEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEec--ccccCCeee
Confidence 6777763 33455555 8999999999999999999983 222110 0000000 36899776 98864 334
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhh-cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQ-AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~-~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
|.+++++ ++.+.+.. ..+....++ +....++..+.|+.+.++ .+.+++.+.-++|.+.|++
T Consensus 823 ~av~~~~--------------~i~~~~~~~~~~~sT~~g-nP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~ 884 (972)
T PRK06149 823 GAVITRR--------------EIAEALEAEGYFFSSTGG-SPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEA 884 (972)
T ss_pred EEEEEcH--------------HHHhhhccCCcccCCCCC-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 8888887 55554432 122122233 344444444567766543 4566677777778777776
Q ss_pred c--CCEEecC--CCCcceeeeeccCC----CCc---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 375 R--GYDLVSG--GTENHLVLVNLRNK----GID---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 375 ~--g~~~~~~--~~~~~~~~v~~~~~----~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
+ ...++.. |. .-+.-+.+... ..+ ...+.+.|.+.||.+. |.. ...+.|||.++...+
T Consensus 885 l~~~~~~i~~vrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~----~~g---~~~~vl~~~Ppl~it--- 953 (972)
T PRK06149 885 LADRHPLIGAVHGM-GLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQ----PTG---DHLNILKIKPPLCLD--- 953 (972)
T ss_pred HHHhCCCeEEEeec-ceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEe----ecC---CCCCEEEEECCCcCC---
Confidence 5 1222221 11 12333333210 011 3456677778999996 211 113679999888888
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~ 461 (519)
++|++.+++.|.+++..
T Consensus 954 -~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 954 -RESADFFVDMLDRVLTE 970 (972)
T ss_pred -HHHHHHHHHHHHHHHHh
Confidence 89999999999999863
No 356
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.33 E-value=2.4e-09 Score=112.26 Aligned_cols=331 Identities=16% Similarity=0.139 Sum_probs=174.4
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~p 165 (519)
-.|.|.+|+.+.+.+- .+....++. .+.. ....+++.+.+....+. ....+||+.|+.+++... ...
T Consensus 70 ~~p~i~~Ai~~ql~~~---~~~~~~~~~-~~~~----~~lae~L~~~~p~~~~~---v~f~~SGsEA~e~AlklAr~~tg 138 (457)
T PRK05639 70 SHPKLVKAVQEQVALI---QHSMIGYTH-SERA----IRVAEKLAEISPIENPK---VLFGLSGSDAVDMAIKVSKFSTR 138 (457)
T ss_pred CCHHHHHHHHHHHHhc---cccccCccC-CHHH----HHHHHHHHhhCCCCcCE---EEEeCchHHHHHHHHHHHHHhcC
Confidence 4789999998887652 111111111 1221 22336666776543232 256677888888777654 233
Q ss_pred CCEEEEecCC-Ccccccccccc-----cCCceeeeeeeeEEEeeeeCCC-----CCCCCH--------HHHHHHhh----
Q 010058 166 HERIMALDLP-HGGHLSHGYQT-----DTKKISAVSIFFETMPYRLDES-----TGYIDY--------EQLEKSAA---- 222 (519)
Q Consensus 166 GD~Vl~~~~~-~~~~~~~~~~~-----~~~~v~~~g~~~~~v~~~~d~~-----~~~iD~--------d~l~~~i~---- 222 (519)
..+|+...-. ||.+....... ......-.-..+..+|++.... ...-|. +.+++.+.
T Consensus 139 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 218 (457)
T PRK05639 139 RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVV 218 (457)
T ss_pred CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 4567766543 33332111000 0000000000123344331100 000122 23444432
Q ss_pred -hhCCcEEEEcccc--ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccC
Q 010058 223 -LFRPKLIVAGASA--YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRG 292 (519)
Q Consensus 223 -~~k~klIi~~~sn--~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~G 292 (519)
..+..+|++.|-. -|. ..-+++++++|++||+++|+|++|. |+-..+.. ..-++ ..|+++++ |.|+|
T Consensus 219 ~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~~g--K~l~g 295 (457)
T PRK05639 219 PPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLIIFG--KGVAS 295 (457)
T ss_pred CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEEec--hhhcC
Confidence 2356778777332 232 2238999999999999999999986 43222210 00011 46999965 99974
Q ss_pred C-CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHH
Q 010058 293 P-RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371 (519)
Q Consensus 293 p-rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (519)
. ..|.+++++ ++.+..... ..+..++ +....++..++++.+.+ +...++..++.++|.+.
T Consensus 296 G~pi~av~~~~--------------~i~~~~~~~-~~~T~~g-~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~ 356 (457)
T PRK05639 296 GMGLSGVIGRK--------------ELMDLTSGS-ALLTPAA-NPVISAAAEATLEIIEE---ENLLKNALKVGEFIKKR 356 (457)
T ss_pred CCcceeEEehH--------------HHHhhcCCC-cccCCCc-CHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHH
Confidence 3 338888887 444421111 1122232 33344444556666544 34566777778888888
Q ss_pred HHhc--CCEEecCCC-CcceeeeeccCC-CC-c---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 372 LLER--GYDLVSGGT-ENHLVLVNLRNK-GI-D---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 372 L~~~--g~~~~~~~~-~~~~~~v~~~~~-~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
|+++ ++.++..-. ..-+.-+.+... .. + ...+.+.|.+.|+.+.. .. ...+.||+.++...|
T Consensus 357 L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----~g---~~~~~lr~~Ppl~it--- 426 (457)
T PRK05639 357 LLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPS----YG---MFGNVIRITPPLVIT--- 426 (457)
T ss_pred HHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEee----cC---CCCCEEEEeCCCccC---
Confidence 8774 344333211 112223333211 11 1 23466677789999852 11 124689999998888
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~~ 462 (519)
++|++++++.|++++...
T Consensus 427 -~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 427 -KEIAEKGLEIMERAIKDA 444 (457)
T ss_pred -HHHHHHHHHHHHHHHHHH
Confidence 999999999999999754
No 357
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.33 E-value=1.5e-10 Score=108.60 Aligned_cols=256 Identities=20% Similarity=0.271 Sum_probs=153.7
Q ss_pred HHHHHHHhhHhhhccCCC-CCCCCCCCCch-hHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCC
Q 010058 90 VSVMQAVGSVMTNKYSEG-YPGARYYGGNE-YIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHE 167 (519)
Q Consensus 90 ~~V~ea~~~~l~~~~~~g-~p~~~~y~~~~-~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD 167 (519)
..|++|.... +-++. ..++..|+..+ +.|.|+ +-+++.||++.+- +.+++.||+.|+..++.++|+|||
T Consensus 38 ~kVL~AF~~~---rvs~~hf~~stGYGydD~GRdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgD 108 (416)
T COG4100 38 KKVLEAFRHH---RVSESHFTGSTGYGYDDLGRDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGD 108 (416)
T ss_pred HHHHHHHHhc---ccchhccCCCCCCCccccchhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCC
Confidence 4666766542 22111 22333344333 356666 8889999998765 789999999999999999999999
Q ss_pred EEEEecCCCcccccc--ccccc-CCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-cc-----c
Q 010058 168 RIMALDLPHGGHLSH--GYQTD-TKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YA-----R 238 (519)
Q Consensus 168 ~Vl~~~~~~~~~~~~--~~~~~-~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g-----~ 238 (519)
+.+...-.-.-.+.. |.... .....=.|+.++.+++. .++.+|++.+...+++ +||+|.+.-|. |+ .
T Consensus 109 ell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt---~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~ 184 (416)
T COG4100 109 ELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLT---ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLS 184 (416)
T ss_pred eEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccc---cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCccc
Confidence 998654211000000 00000 00111124556677654 3489999999999998 99999987444 65 3
Q ss_pred cccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCCC-CCeEEEEcCCCcccCC---CcceEEeecccccccccCc
Q 010058 239 LYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGP---RGAMIFFRKGVKEINKQGQ 312 (519)
Q Consensus 239 ~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~S~~K~l~Gp---rgG~i~~~~~~~~~~~~g~ 312 (519)
+.+++++.++.++. ++++.||.++ |-+..... |.. ++|++.+|.-|+-+|. .||+|.+++
T Consensus 185 I~eI~~~i~~vk~inpn~ivFVDNCY--GEFvE~~E--Pt~vGaDliAGSLIKNpGGgiaktGGYiaGk~---------- 250 (416)
T COG4100 185 IAEIEEMITFVKEINPNVIVFVDNCY--GEFVEEKE--PTHVGADLIAGSLIKNPGGGIAKTGGYIAGKA---------- 250 (416)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeccc--hhhhhccC--ccccchhhhccceeeCCCCceeeccceeechH----------
Confidence 45567777777765 7899999984 32322222 222 7999999999987653 358999988
Q ss_pred chhhhHHHHhh-hcccCCCC--CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 313 EVMYAYEDKIN-QAVFPGLQ--GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 313 ~~~~~~~~~i~-~~~~~~~~--g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
++.+.-. +...|+.. ++.....+..+-..|= .. .....+..+-+......|.++|+++.+
T Consensus 251 ----~~ve~~~yRlTaPGIG~e~Gat~~~l~~myqGlF--lA---Phvv~qa~Kga~fta~~le~lg~~~~P 313 (416)
T COG4100 251 ----ELVEAAAYRLTAPGIGREGGATLYSLREMYQGLF--LA---PHVVSQAVKGAHFTARFLEKLGFPVNP 313 (416)
T ss_pred ----HHHHhhceeeecCCccccccccHHHHHHHHhhhc--cc---hHHHHHHhhhhHHHHHHHHHcCCCCCC
Confidence 4443211 11223332 2323222222222211 11 334556666666777778888988754
No 358
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.32 E-value=9.5e-11 Score=119.88 Aligned_cols=310 Identities=20% Similarity=0.229 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH---HHHHHHHhhc-CCCC----EEEEecCCCcccccccccccCCce
Q 010058 120 IDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP---ANFQVYTALL-KPHE----RIMALDLPHGGHLSHGYQTDTKKI 191 (519)
Q Consensus 120 ~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~---a~~~~~~all-~pGD----~Vl~~~~~~~~~~~~~~~~~~~~v 191 (519)
..++-....+++.+..|.|. ..+|+.||++ +-+.++++.+ ..|+ ..+++...||.... ..
T Consensus 580 Y~~lf~~Le~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA 647 (1001)
T KOG2040|consen 580 YQQLFTELEKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SA 647 (1001)
T ss_pred HHHHHHHHHHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hH
Confidence 44444455589999999886 4699999997 6666888874 3443 35666656666532 12
Q ss_pred eeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhC--CcEEEEc-ccccc-ccccHHHHHHHHhhcCCEEEehhhhh---h
Q 010058 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFR--PKLIVAG-ASAYA-RLYDYARIRKVCDKQKAVMLADMAHI---S 264 (519)
Q Consensus 192 ~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k--~klIi~~-~sn~g-~~~d~~~i~~ia~~~~~~livD~ah~---~ 264 (519)
.++|. +.+|+..+ .++.||+.+|++++.+++ -.++.+. ||.+| ...++++++++.++||--|..|+|.. .
T Consensus 648 ~Magm--kvvpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqV 724 (1001)
T KOG2040|consen 648 AMAGM--KVVPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQV 724 (1001)
T ss_pred HhcCC--EEEEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCcccee
Confidence 23454 44555555 468999999999988754 4566677 66688 45679999999999999999998754 2
Q ss_pred hccccCCCCCCCCCCeEEEEcCCCcccCCCc------ceEEeeccccccc-ccCcchh-h---hHHHHhhhcccCCCCCC
Q 010058 265 GLVAAGVIPSPFEYADVVTTTTHKSLRGPRG------AMIFFRKGVKEIN-KQGQEVM-Y---AYEDKINQAVFPGLQGG 333 (519)
Q Consensus 265 g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg------G~i~~~~~~~~~~-~~g~~~~-~---~~~~~i~~~~~~~~~g~ 333 (519)
|+...|-. ++|+.-...||+++-|.| |-|.+++-+ .| ..+..+. . +-...+.. +...-+|+
T Consensus 725 Glc~pGd~-----GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HL--apfLP~HpVvs~~~~~~~~~~gs-VsaaP~Gs 796 (1001)
T KOG2040|consen 725 GLCRPGDI-----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL--APFLPSHPVVSPGRPEDTSPVGS-VSAAPWGS 796 (1001)
T ss_pred cccCCccc-----cccceeecccceeeecCCCCCCCCCccchhhhc--cccCCCCCccCCCCCCCCCCccc-eeccCCCc
Confidence 43332222 689999999999854433 556555532 11 1110000 0 00000000 00001133
Q ss_pred ccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec-C--CCCcceeeeeccCC----CCcHHHHHHh
Q 010058 334 PHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS-G--GTENHLVLVNLRNK----GIDGSRVEKV 406 (519)
Q Consensus 334 ~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~--~~~~~~~~v~~~~~----~~~~~~~~~~ 406 (519)
.....|. .+-++.+...+++...+-..-|++++.++|+.. ++++. + +.-.|-+++|+++. ++...++.++
T Consensus 797 a~ILpIS--waYikmMG~~GL~~as~~AiLNaNYMakRLe~h-Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKR 873 (1001)
T KOG2040|consen 797 ALILPIS--WAYIKMMGSGGLKDASKIAILNANYMAKRLESH-YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKR 873 (1001)
T ss_pred ceeehhH--HHHHHHhcccccchhhHHHhhhhHHHHHHHhhc-cceeEecCCcceeeeeeeechhhccccCCcHHHHHHH
Confidence 2222222 234566666677777777788999999999986 34433 2 33567788888763 5778889999
Q ss_pred hcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 010058 407 LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKI 465 (519)
Q Consensus 407 L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~ 465 (519)
|.++|+..-.-++| .++.+-|-...-.+ .+|++++++++-.+=+...+|
T Consensus 874 L~DYgFHaPTmswP------V~gtLMIEPTESE~----k~ElDRfcdAliSIreEI~~i 922 (1001)
T KOG2040|consen 874 LMDYGFHAPTMSWP------VAGTLMIEPTESED----KAELDRFCDALISIREEIAQI 922 (1001)
T ss_pred HHhccCCCCccccc------cCCceEeccCcccc----HHHHHHHHHHHHHHHHHHHHH
Confidence 99999987322222 34556665443333 688888888876655444444
No 359
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=1.7e-10 Score=112.08 Aligned_cols=330 Identities=17% Similarity=0.195 Sum_probs=195.5
Q ss_pred CCCCCC----cHHHHHHHhhHhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHH
Q 010058 83 PSENFT----SVSVMQAVGSVMTNKYSEGYPGAR-YYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQ 157 (519)
Q Consensus 83 a~en~~----~~~V~ea~~~~l~~~~~~g~p~~~-~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~ 157 (519)
+|.|+. .+++.+.....+.+ |.-|..|.| +|+..+-.-.+| +++++++|++. .|+..-|.++...
T Consensus 100 aS~NfL~l~~~~~ike~a~~~lrk-yGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~-----aivYs~gF~ti~S 169 (467)
T KOG1358|consen 100 ASANFLGLIENEEIKEEASFTLRK-YGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTED-----AIVYSYGFSTIES 169 (467)
T ss_pred cchhhhhhcccHHHHHHHHHHHHH-hCCCCcCCCcccccceeecccH----HHHHHhhCCcc-----eeeeccccchhhh
Confidence 577764 67888888887765 766766655 566655555677 89999999986 3888888887777
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh------CC-----
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF------RP----- 226 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~------k~----- 226 (519)
++.++.+.||.|.+....+-+.. ++++++--. ...+ ...|.+++++...+. +|
T Consensus 170 ~ipafsKrGDIi~~de~~nfaIq--------~GlqlSRS~--i~~F------khndm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 170 AIPAFSKRGDIIFVDEAVNFAIQ--------KGLQLSRST--ISYF------KHNDMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred cchhhhccCcEEEEehhhhHHHH--------HHHhhhhhe--eEEe------cCCCHHHHHHhccCcchhhhhccccccc
Confidence 99999999999997763322221 122222100 1111 234667776655331 12
Q ss_pred -cEEEEc--cccccccccHHHHHHHHhhcCCEEEehhhhhhhcccc---CCCC---CCCCCCeEEEEcCCCcccCCCcce
Q 010058 227 -KLIVAG--ASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAA---GVIP---SPFEYADVVTTTTHKSLRGPRGAM 297 (519)
Q Consensus 227 -klIi~~--~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~---~~~~---~p~~~~di~~~S~~K~l~GprgG~ 297 (519)
+.|++. ..|+|...|+.+|.++..++...+|.|+...+|.... |+.. -|...+|++++|..-+|++ .||+
T Consensus 234 Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas-~GgF 312 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS-GGGF 312 (467)
T ss_pred eEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc-cCce
Confidence 234444 7889999999999999999999999999988876643 2221 2344789999997776653 4677
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G 376 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 376 (519)
..++.-+. +. +++...-+-.....|....-+|. .++..... -.+..+.++.....+-..|... +
T Consensus 313 c~G~~~i~-----------~h-QrLSg~~Y~fSAslPp~la~aa~-~ai~i~~~--~p~~~~~L~~k~~~~H~~l~~~s~ 377 (467)
T KOG1358|consen 313 CAGKSFIA-----------DH-QRLSGSGYCFSASLPPYLAGAAI-KAILIEEW--NPEIVQPLRAKVAKFHAALSSNSG 377 (467)
T ss_pred eecceeeE-----------ee-eeccccceeeeccCchhhhhhHH-HHHHHHhh--CcchhhhhhccccccchhhhcCCc
Confidence 77754211 11 11111101111123333333332 23332211 1235556667677777788877 6
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHH-------HH-HhhcccCeEEccc-ccCCCCCCCCCCeEEeccCccccCCCCHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSR-------VE-KVLESVHIAANKN-TVPGDVSAMVPGGIRMGTPALTSRGFVEED 447 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~-~~L~~~gI~v~~~-~~p~~~~~~~~~~iRi~~~~~ttrg~~~~d 447 (519)
+.+.+. ..+....+.+.....+.++ +. +.+.+ |+.+... .+-+......+..|||.+.. +++++|
T Consensus 378 ~~v~~~-~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a----~~seee 451 (467)
T KOG1358|consen 378 FIVSGS-PESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSA----GMSEEE 451 (467)
T ss_pred eEEecC-cCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeC----CCCHHH
Confidence 666543 2333444444432222221 22 22233 7766432 22222222235579998664 555999
Q ss_pred HHHHHHHHHHHHH
Q 010058 448 FEKVAEFFDAAVK 460 (519)
Q Consensus 448 i~~l~~~l~~~l~ 460 (519)
++++++.|+++..
T Consensus 452 l~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 452 LERAAELIKEVAS 464 (467)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998775
No 360
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.31 E-value=1.6e-09 Score=113.59 Aligned_cols=204 Identities=14% Similarity=0.133 Sum_probs=119.8
Q ss_pred CCcEEEEccc--ccccc----ccHHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCccc-CCC
Q 010058 225 RPKLIVAGAS--AYARL----YDYARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSLR-GPR 294 (519)
Q Consensus 225 k~klIi~~~s--n~g~~----~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l~-Gpr 294 (519)
++.+|++.+. +-|.. .-+++++++|++||+++|+|+.+. |+-..+.. . .-++ ..|+++++ |+|+ |.+
T Consensus 206 ~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--K~l~~G~P 282 (442)
T TIGR00709 206 KPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA-GFGRSGTMFAFEHAGIEPDFVVMS--KAVGGGLP 282 (442)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCchhHHHHcCCCCcEEEEc--ccccCCcc
Confidence 4667777632 22322 237899999999999999999864 33222210 0 0011 35899975 8874 555
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
.|++++++ ++ ..+......... +.+....++..++++.+.+. .+.+++.++.++|.+.|++
T Consensus 283 igav~~~~--------------~~-~~~~~~~~~~T~-~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~ 343 (442)
T TIGR00709 283 LAVLLIAP--------------EF-DAWQPAGHTGTF-RGNQLAMVTGTEALNYWKDD---NLAQNAQERGERITSFLDD 343 (442)
T ss_pred cEEEEEch--------------HH-hccCCCcCCCCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 68888877 32 222111112222 23444455555667665443 3466777788888888876
Q ss_pred c--CCEEecCCC-CcceeeeeccCCC--------C-----cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcc
Q 010058 375 R--GYDLVSGGT-ENHLVLVNLRNKG--------I-----DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPAL 438 (519)
Q Consensus 375 ~--g~~~~~~~~-~~~~~~v~~~~~~--------~-----~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ 438 (519)
+ .+.++..-. ..-+.-+.+.... . ....+...+.+.||.+.. .. ...+.||+.++..
T Consensus 344 l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~----~~---~~~~~l~~~Ppl~ 416 (442)
T TIGR00709 344 MIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLET----GG---REGEVFRLLCPIT 416 (442)
T ss_pred HHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEee----cC---CCCCEEEEECCCC
Confidence 4 233332211 1123333332110 0 123456667789999852 11 1246799999988
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 010058 439 TSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 439 ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.| ++|++++++++.+++..
T Consensus 417 it----~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 417 ID----QEECEEGISRFKQAVEE 435 (442)
T ss_pred CC----HHHHHHHHHHHHHHHHH
Confidence 88 99999999999999864
No 361
>PRK06917 hypothetical protein; Provisional
Probab=99.31 E-value=2.1e-09 Score=112.63 Aligned_cols=335 Identities=13% Similarity=0.116 Sum_probs=176.0
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.|.+|+.+.+.. . .+.....+. + +.+....+++.+++....+. -...+||+.|+.+++....
T Consensus 48 ~hp~v~~Ai~~ql~~-~--~~~~~~~~~-~----~~~~~lae~L~~~~p~~~~~---v~f~~sGsEAve~AlklAr~~~~ 116 (447)
T PRK06917 48 GVKEIADAIKEQAEE-V--SFVYRSQFT-S----EPAEKLAKKLSDLSPGDLNW---SFFVNSGSEANETAMKIAIQHFQ 116 (447)
T ss_pred CCHHHHHHHHHHHhh-C--cCccccccC-C----HHHHHHHHHHHHhCCCCCCE---EEEeCChHHHHHHHHHHHHHHHH
Confidence 478888888887765 2 111100011 1 22223346777776533221 2556788888887777541
Q ss_pred ---CC-CCEEEEecCCC-cccccccccccCCce--eeee--eeeEEEeeee------CCCCC---CCCHHHHHHHhhhh-
Q 010058 164 ---KP-HERIMALDLPH-GGHLSHGYQTDTKKI--SAVS--IFFETMPYRL------DESTG---YIDYEQLEKSAALF- 224 (519)
Q Consensus 164 ---~p-GD~Vl~~~~~~-~~~~~~~~~~~~~~v--~~~g--~~~~~v~~~~------d~~~~---~iD~d~l~~~i~~~- 224 (519)
.+ ..+|+...-.| |.+............ .+.. ..+..++++. +.... .-|.+.+++.+..+
T Consensus 117 ~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 196 (447)
T PRK06917 117 ERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG 196 (447)
T ss_pred hcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC
Confidence 12 36787766433 222111000000000 0000 0011122110 00000 01346677777532
Q ss_pred --CCcEEEEcccc--cc-c----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCCcccC
Q 010058 225 --RPKLIVAGASA--YA-R----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSLRG 292 (519)
Q Consensus 225 --k~klIi~~~sn--~g-~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K~l~G 292 (519)
+..+|++.|-. .| . ..-+++++++|++||+++|+|+.+. |+-..+..- .-++ ..|+++++ |.|+|
T Consensus 197 ~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~g--K~l~~ 273 (447)
T PRK06917 197 AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTLG--KGLGA 273 (447)
T ss_pred CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEee--ehhcc
Confidence 46777777432 22 2 2237899999999999999999975 431222100 0011 35888876 99875
Q ss_pred C--CcceEEeecccccccccCcchhhhHHHHhhhc---ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHH
Q 010058 293 P--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA---VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSK 367 (519)
Q Consensus 293 p--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~---~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~ 367 (519)
. ..|.+++++ ++.+.+... .+.+...+.+....++..+.++.+.++ .+.+++.++-++
T Consensus 274 G~~Pi~a~~~~~--------------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~ 336 (447)
T PRK06917 274 GYTPIAATVVSD--------------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKH---NLPEKAAEKGEY 336 (447)
T ss_pred CCcceEEEEEcH--------------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHH
Confidence 3 467777777 455444321 122111223444455555667665433 356677777777
Q ss_pred HHHHHHhc--CCEEecC--CCCcceeeeeccCC-----CC-----cHHHHHHhhcccCeEEcccccCCCC--CCCCCCeE
Q 010058 368 FARSLLER--GYDLVSG--GTENHLVLVNLRNK-----GI-----DGSRVEKVLESVHIAANKNTVPGDV--SAMVPGGI 431 (519)
Q Consensus 368 l~~~L~~~--g~~~~~~--~~~~~~~~v~~~~~-----~~-----~~~~~~~~L~~~gI~v~~~~~p~~~--~~~~~~~i 431 (519)
|.+.|+++ .+.++.. +. ..+.-+.+... .. -...+...|.+.||.+. |... .....+.+
T Consensus 337 l~~~L~~l~~~~~~i~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~----~~~~~~~g~~~~~i 411 (447)
T PRK06917 337 LIKGLQKVQQQSTIIGDVRGK-GLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLY----PAVAGQDGKEGDAV 411 (447)
T ss_pred HHHHHHHHHhcCCCEEEEeec-ceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEE----ecccccCCCCCCEE
Confidence 77777765 2332221 11 12333333211 00 13346667778999986 2211 01124689
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
|++++...| ++|++++++++.+++...
T Consensus 412 ~l~Ppl~it----~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 412 IIAPPMTIT----YSELDELLSIFAKSVEEM 438 (447)
T ss_pred EEECCCcCC----HHHHHHHHHHHHHHHHHH
Confidence 999998888 999999999999999754
No 362
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.31 E-value=3.4e-12 Score=125.43 Aligned_cols=246 Identities=18% Similarity=0.252 Sum_probs=54.9
Q ss_pred CCCCCcHHHHHHHhhHhhhccCC-------CCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHH
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSE-------GYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~-------g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~ 156 (519)
+-.++++++.+++.+...+ |++ |-.+.|| +.++ +.+++++|++.. +++.+++.|.+
T Consensus 14 GRs~l~~~a~~a~~~~a~~-Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAeaA-----~VvNnnaAAv~ 76 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASG-YSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEAA-----LVVNNNAAAVL 76 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccc-ccccccccccccccccc-------cccc----cccccccccccc-----ccccccccccc
Confidence 4456789999998877655 321 1222221 2344 677889999862 77777777777
Q ss_pred HHHHhhcCCCCEEEEecC---CCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 157 QVYTALLKPHERIMALDL---PHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 157 ~~~~all~pGD~Vl~~~~---~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
.++.++. +|.+|++..- +.|+.+.- ...+..+|...+.|-. +..-.+++++++|++ +|.+|+-.
T Consensus 77 L~l~~la-~~~EvIvsRGelVeiGgsFRi-----p~vm~~sGa~lvEVGt-----tN~t~~~Dye~AI~e-~Ta~ll~Vh 144 (367)
T PF03841_consen 77 LALNTLA-KGKEVIVSRGELVEIGGSFRI-----PDVMRQSGARLVEVGT-----TNRTHLSDYEKAITE-NTAALLKVH 144 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc-ccccccccccccccccccccc-----cccccccccccccccc-----ccccccccccccccc-ccccccccc
Confidence 6666664 5777776532 22333211 1134445555444421 234457778889998 89888766
Q ss_pred cccc---c--ccccHHHHHHHHhhcCCEEEehhhhhhhcc----ccCCCCCC-----C-CCCeEEEEcCCCcccCCCcce
Q 010058 233 ASAY---A--RLYDYARIRKVCDKQKAVMLADMAHISGLV----AAGVIPSP-----F-EYADVVTTTTHKSLRGPRGAM 297 (519)
Q Consensus 233 ~sn~---g--~~~d~~~i~~ia~~~~~~livD~ah~~g~~----~~~~~~~p-----~-~~~di~~~S~~K~l~GprgG~ 297 (519)
.||| | ...+++++.++|++|++++++|.+. |.. ..++.+.| + .++|+++||..|.|+||+.|+
T Consensus 145 ~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dlgs--G~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGi 222 (367)
T PF03841_consen 145 TSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGS--GLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGI 222 (367)
T ss_dssp ----------------HHHHHHHHHT--EEEE-TT--HHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EE
T ss_pred ccccccccccccccHHHHHHHHhhcCCcEEEECCC--CCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEE
Confidence 6886 3 4567999999999999999999873 322 12222111 1 279999999999999999999
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh-----------HHHHHHHHHHHHH
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE-----------YKAYQEQVLSNSS 366 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~-----------~~~~~~~~~~~~~ 366 (519)
|++++ ++++++++... +..--..-..++++.++++....++ +..-.+.+.++++
T Consensus 223 I~Gkk--------------~lI~~lk~~pl-~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~ 287 (367)
T PF03841_consen 223 IVGKK--------------ELIEKLKKHPL-GRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAE 287 (367)
T ss_dssp EEEEH--------------HHHHHHHHHHH-TTT-B--HHHHHHHHHHHHH-----------------------------
T ss_pred EEeCH--------------HHHHHHhhCCC-cceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccc
Confidence 99999 66666654311 1112335667888888888655311 1222345566677
Q ss_pred HHHHHHHhc
Q 010058 367 KFARSLLER 375 (519)
Q Consensus 367 ~l~~~L~~~ 375 (519)
.|...|...
T Consensus 288 ~l~~~l~~~ 296 (367)
T PF03841_consen 288 RLAAQLKAA 296 (367)
T ss_dssp ---------
T ss_pred ccccccccc
Confidence 777766654
No 363
>PRK07481 hypothetical protein; Provisional
Probab=99.30 E-value=2.9e-09 Score=111.73 Aligned_cols=200 Identities=16% Similarity=0.264 Sum_probs=119.1
Q ss_pred CCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC---CCCCCC-CCeEEEEcCCCcccCC-
Q 010058 225 RPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV---IPSPFE-YADVVTTTTHKSLRGP- 293 (519)
Q Consensus 225 k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~---~~~p~~-~~di~~~S~~K~l~Gp- 293 (519)
++.+|++.|-. .|...+ +++++++|++||+++|.|+.+. |+-..+. ... ++ ..|+++++ |.|+|.
T Consensus 213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~-~gv~PDiv~~g--Kgl~gG~ 288 (449)
T PRK07481 213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVT-GFGRTGSWFGSRG-WGVKPDIMCLA--KGITSGY 288 (449)
T ss_pred cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCcCchhhHhhh-cCCCCCEEEEe--ecccCCC
Confidence 56777777433 343222 8999999999999999999865 3211110 000 11 36999987 988753
Q ss_pred -CcceEEeecccccccccCcchhhhHHHHhhhc------c-cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHH
Q 010058 294 -RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------V-FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNS 365 (519)
Q Consensus 294 -rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~ 365 (519)
..|.+++++ ++.+.+... . ..+..++ +....++..+.++.+.++ ...+++.+.-
T Consensus 289 ~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~aaa~a~L~~l~~~---~l~~~~~~~g 350 (449)
T PRK07481 289 VPLGATMVNA--------------RIADAFEANADFGGAIMHGYTYSG-HPVACAAALATLDIVVRE---DLPANAAKRG 350 (449)
T ss_pred cCceEEEEcH--------------HHHHHHhccCccccccccCCCCCC-CHHHHHHHHHHHHHHHhh---hHHHHHHHHH
Confidence 457777777 444444321 1 1112222 344445545566665443 4566777777
Q ss_pred HHHHHHHHhc--CCEEecC--CCCcceeeeeccCCC-----Cc-----HHHHHHhhcccCeEEcccccCCCCCCCCCCeE
Q 010058 366 SKFARSLLER--GYDLVSG--GTENHLVLVNLRNKG-----ID-----GSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431 (519)
Q Consensus 366 ~~l~~~L~~~--g~~~~~~--~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~i 431 (519)
++|.+.|+++ .+.++.. +. ..+.-+.+.... .+ ...+...|.+.||.+. |. .+.+
T Consensus 351 ~~l~~~L~~l~~~~~~i~~vrG~-Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~----~~------g~~i 419 (449)
T PRK07481 351 AYLLEGLQPLKERFELVGDVRGK-GLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVR----PS------GTKI 419 (449)
T ss_pred HHHHHHHHHHhhcCCCeEEEeec-ceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEE----ec------CCEE
Confidence 7777777665 2333221 11 123334432110 01 2345666778999986 21 1358
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
||+++...| ++|++++++.|.++++.
T Consensus 420 ~l~Ppl~it----~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 420 ILSPPLVIQ----REDVDRIVDALDAGLSA 445 (449)
T ss_pred EEECCCCCC----HHHHHHHHHHHHHHHHh
Confidence 999887777 89999999999999864
No 364
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.30 E-value=5.5e-09 Score=109.72 Aligned_cols=324 Identities=15% Similarity=0.142 Sum_probs=169.0
Q ss_pred CeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.|++..+-. .-.|.|.+++.+.+.... .+...+ ..+....+++.+.+.. .+. -....||+
T Consensus 101 yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~-------~~~~~~----~~~~~lAe~l~~~~p~-~~~---v~f~~SGs 165 (474)
T PLN02482 101 YIDYVGSWGPAIIGHADDEVLAALAETMKKGT-------SFGAPC----LLENVLAEMVIDAVPS-VEM---VRFVNSGT 165 (474)
T ss_pred EEEecccccccccCCCCHHHHHHHHHHHhhCC-------CCCCCC----HHHHHHHHHHHHhCCC-CCE---EEEeCChH
Confidence 456554422 237899999999887522 111111 2222334666666642 222 25567788
Q ss_pred HHHHHHHHhh--cCCCCEEEEecCCCcccc-cccccccCC----c-eeeeeeee----EEEeeeeCCCCCCCCHHHHHHH
Q 010058 153 PANFQVYTAL--LKPHERIMALDLPHGGHL-SHGYQTDTK----K-ISAVSIFF----ETMPYRLDESTGYIDYEQLEKS 220 (519)
Q Consensus 153 ~a~~~~~~al--l~pGD~Vl~~~~~~~~~~-~~~~~~~~~----~-v~~~g~~~----~~v~~~~d~~~~~iD~d~l~~~ 220 (519)
.|+.+++... ....++|+...-.|-|+. ..+...... . ....|... ..+.++ .-|++++++.
T Consensus 166 EA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~ 239 (474)
T PLN02482 166 EACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP------YNDLEAVKKL 239 (474)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec------CCChHHHHHH
Confidence 8888776644 233467777654332221 100000000 0 00001000 001111 1278889988
Q ss_pred hhhh--CCcEEEEc--ccccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCc
Q 010058 221 AALF--RPKLIVAG--ASAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKS 289 (519)
Q Consensus 221 i~~~--k~klIi~~--~sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~ 289 (519)
+.++ +..+|++. .++.|...+ +++++++|++||+++|+|++| .|+ ..+.. ..-++ ..|+++++ |.
T Consensus 240 l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGf-R~g~~ga~~~~gv~PDi~t~g--K~ 315 (474)
T PLN02482 240 FEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGF-RIAYGGAQEYFGITPDLTTLG--KV 315 (474)
T ss_pred HHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCe-ecCcchHhHHhCCCCCEEEec--ch
Confidence 8642 45667776 333453333 679999999999999999998 454 22110 00011 35887775 99
Q ss_pred ccC-CCcceEEeecccccccccCcchhhhHHHHhhhc--ccC-CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHH
Q 010058 290 LRG-PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--VFP-GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNS 365 (519)
Q Consensus 290 l~G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~~-~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~ 365 (519)
|+| ...|.+++++ ++.+.+... .+. +..+ .+....++..++|+.+.++ ...+++.++.
T Consensus 316 lggG~Pigav~g~~--------------ei~~~~~~~~~~~~~~T~~-gnpl~~aAala~L~~l~~~---~~~~~~~~~g 377 (474)
T PLN02482 316 IGGGLPVGAYGGRR--------------EIMEMVAPAGPMYQAGTLS-GNPLAMTAGIHTLKRLQQP---GTYEYLDKIT 377 (474)
T ss_pred hhCCCceEEEEEcH--------------HHHHhhccCCCcccccCcc-hhHHHHHHHHHHHHHHhcc---CHHHHHHHHH
Confidence 864 2346667777 555544321 111 1111 2444455555567766543 3566777777
Q ss_pred HHHHHHHHhc----CCEEecCCCCcceeeeeccCCC---------Cc---HHHHHHhhcccCeEEcccccCCCCCCCCCC
Q 010058 366 SKFARSLLER----GYDLVSGGTENHLVLVNLRNKG---------ID---GSRVEKVLESVHIAANKNTVPGDVSAMVPG 429 (519)
Q Consensus 366 ~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~---------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 429 (519)
++|.+.|+++ |+.++..+-.. ++-+.+.... .+ ...+.+.|.+.||.+. |.... .
T Consensus 378 ~~l~~~L~~l~~~~g~~~~~~~v~g-~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~----~~~~~----~ 448 (474)
T PLN02482 378 KKLIQGILEAGKKAGHEMCGGYISG-MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLA----PSQFE----A 448 (474)
T ss_pred HHHHHHHHHHHHhcCCCEEEcccce-EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEe----ccCCC----C
Confidence 7777777665 44443211111 2222221100 01 1245666778999986 21110 0
Q ss_pred eEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 430 GIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 430 ~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+ .++...| ++|++++++++++++.
T Consensus 449 --~-~psl~ht----~~dId~~l~al~~~l~ 472 (474)
T PLN02482 449 --G-FTSLAHT----EEDIDFTIAAAERVLA 472 (474)
T ss_pred --C-cCCCCCC----HHHHHHHHHHHHHHHH
Confidence 1 1344445 8999999999999885
No 365
>PRK07036 hypothetical protein; Provisional
Probab=99.30 E-value=1.9e-09 Score=113.40 Aligned_cols=213 Identities=15% Similarity=0.200 Sum_probs=125.2
Q ss_pred HHHHHHhhh---hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhh-hhccc--cCCCCCCCC-CCeE
Q 010058 215 EQLEKSAAL---FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVA--AGVIPSPFE-YADV 281 (519)
Q Consensus 215 d~l~~~i~~---~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~--~~~~~~p~~-~~di 281 (519)
+.+++.+.. .++.+|++.|-. .|...+ +++++++|++||+++|+|+.+. .|-.. .+... -++ ..|+
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~-~~gv~PDi 285 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEA-VFGIQPDI 285 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhh-hcCCCCCE
Confidence 445555542 246677777432 344343 8999999999999999999974 22111 01100 011 3589
Q ss_pred EEEcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhhhc------ccCCCCCCccHHHHHHHHHHHHHhcCHh
Q 010058 282 VTTTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------VFPGLQGGPHNHTISGLAVALKQVKTPE 353 (519)
Q Consensus 282 ~~~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~~~~~~g~~~~~~iaal~~al~~~~~~~ 353 (519)
++++ |.|+|. ..|.+++++ ++.+.+... ...+...+.+....++..+.++.+.++
T Consensus 286 vt~g--K~l~gG~~Pi~av~~~~--------------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~- 348 (466)
T PRK07036 286 ITFA--KGLTSGYQPLGAVIISE--------------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMERE- 348 (466)
T ss_pred EEEc--cccccCccccEEEEEcH--------------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhC-
Confidence 9887 998663 357777777 454444321 111111123444455555566666443
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCEEecC--CCCcceeeeeccCCC-------Cc---HHHHHHhhcccCeEEcccccC
Q 010058 354 YKAYQEQVLSNSSKFARSLLER-GYDLVSG--GTENHLVLVNLRNKG-------ID---GSRVEKVLESVHIAANKNTVP 420 (519)
Q Consensus 354 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~~-------~~---~~~~~~~L~~~gI~v~~~~~p 420 (519)
.+.+++.+..++|.+.|+++ ...++.. +. ..+..+.+.... .+ ...+...|.+.||.+. |
T Consensus 349 --~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~----~ 421 (466)
T PRK07036 349 --GLCEHVREVGPYFEERLASLRELPLVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVR----P 421 (466)
T ss_pred --CHHHHHHHHHHHHHHHHHHhccCCCEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEe----e
Confidence 45677777778888877664 2222221 11 123334442111 01 2346667778999985 2
Q ss_pred CCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 421 GDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 421 ~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
. .+.+|++++...| ++|++++++.+.+++...
T Consensus 422 ~------~~~~~l~Ppl~it----~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 422 L------EHLCVLSPPLIIT----RAQIDEIVAILRAAIEET 453 (466)
T ss_pred c------CCEEEEeCCCcCC----HHHHHHHHHHHHHHHHHH
Confidence 1 1468999887778 899999999999999754
No 366
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.29 E-value=3.8e-09 Score=111.08 Aligned_cols=214 Identities=13% Similarity=0.094 Sum_probs=121.3
Q ss_pred HHHHHHHhhh--hCCcEEEEccc---cccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeE
Q 010058 214 YEQLEKSAAL--FRPKLIVAGAS---AYAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADV 281 (519)
Q Consensus 214 ~d~l~~~i~~--~k~klIi~~~s---n~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di 281 (519)
++.+++.+.. .++.+|++.|- +.|. ..-+++++++|++||+++|+|+.+. |+-..+.. -.-++ ..|+
T Consensus 223 ~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~T-GfGRtG~~~a~e~~gv~PDi 301 (472)
T PRK08742 223 ADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIAT-GFGRTGTLFACEQAGVMPDL 301 (472)
T ss_pred HHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchHHHhcCCCCCE
Confidence 5667777653 25667777662 2342 2237899999999999999999865 22111100 00001 3699
Q ss_pred EEEcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhhhc-----ccCCCCCCccHHHHHHHHHHHHHhcCHhH
Q 010058 282 VTTTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-----VFPGLQGGPHNHTISGLAVALKQVKTPEY 354 (519)
Q Consensus 282 ~~~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-----~~~~~~g~~~~~~iaal~~al~~~~~~~~ 354 (519)
++++ |.|+|. ..|.+++++ ++.+.+... ...+...+.+....++..++++.+.+++
T Consensus 302 v~~g--Kgl~gG~~Plaav~~~~--------------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~- 364 (472)
T PRK08742 302 LCLS--KGLTGGFLPLSAVLATQ--------------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDD- 364 (472)
T ss_pred EEEc--ccccCCCCCcceeeccH--------------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCC-
Confidence 9997 998654 357777777 444433211 1111111224444555555676665443
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCEEecC--CCCcceeeeeccCCC-----Cc-----HHHHHHhhcccCeEEcccccCC
Q 010058 355 KAYQEQVLSNSSKFARSLLER-GYDLVSG--GTENHLVLVNLRNKG-----ID-----GSRVEKVLESVHIAANKNTVPG 421 (519)
Q Consensus 355 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~ 421 (519)
+.++..+..++|.+.++.. .+.++.. +. ..+.-+.+.... .+ ...+.+.+.+.||.+.. .
T Consensus 365 --l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~----~ 437 (472)
T PRK08742 365 --VIARNQPTAARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRP----L 437 (472)
T ss_pred --HHHHHHHHHHHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEe----c
Confidence 3444555555555444332 2222222 11 123333332110 01 13455667789999862 1
Q ss_pred CCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 422 DVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 422 ~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.+.|||.++...+ ++|++++++.|.+++...
T Consensus 438 ------g~vi~~~PpL~it----~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 438 ------GDVLYWMPPYCVD----EAQLALLADTTRHAIDEA 468 (472)
T ss_pred ------CCEEEEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 2579999998888 999999999999999753
No 367
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.28 E-value=2.7e-09 Score=112.21 Aligned_cols=214 Identities=12% Similarity=0.112 Sum_probs=127.4
Q ss_pred HHHHHHHhhh--hCCcEEEEcc-cc--cccc----ccHHHHHHHHhhcCCEEEehhhhhhhccccCC--CCCCCC-CCeE
Q 010058 214 YEQLEKSAAL--FRPKLIVAGA-SA--YARL----YDYARIRKVCDKQKAVMLADMAHISGLVAAGV--IPSPFE-YADV 281 (519)
Q Consensus 214 ~d~l~~~i~~--~k~klIi~~~-sn--~g~~----~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~p~~-~~di 281 (519)
++.+++.+.. .+..+|++.| .. .|.. .-+++++++|++||+++|+|+.+. |+-..+. ...-++ ..|+
T Consensus 201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~T-GfGRtG~~~a~~~~gv~PDi 279 (466)
T PRK07030 201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAV-GFGRTGTMFACEQAGIRPDF 279 (466)
T ss_pred HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCccccchHHHhcCCCCCE
Confidence 5667777753 2566777766 22 3322 238899999999999999999864 2211110 000001 3699
Q ss_pred EEEcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhhhc------ccCCCCCCccHHHHHHHHHHHHHhcCHh
Q 010058 282 VTTTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------VFPGLQGGPHNHTISGLAVALKQVKTPE 353 (519)
Q Consensus 282 ~~~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~~~~~~g~~~~~~iaal~~al~~~~~~~ 353 (519)
++++ |.|+|. ..|.+++++ ++.+.+... ...+...+.+....++..+.++.+.+.
T Consensus 280 v~~g--Kgl~gG~~Pi~av~~~~--------------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~- 342 (466)
T PRK07030 280 LCLS--KALTGGYLPLAAVLTTD--------------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQD- 342 (466)
T ss_pred Eeee--hhccCCcccceEEEecH--------------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhc-
Confidence 9997 888654 457777877 555444211 111111123444455555567766543
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCEEecC--CCCcceeeeeccCCC-------Cc---HHHHHHhhcccCeEEcccccC
Q 010058 354 YKAYQEQVLSNSSKFARSLLER-GYDLVSG--GTENHLVLVNLRNKG-------ID---GSRVEKVLESVHIAANKNTVP 420 (519)
Q Consensus 354 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~~-------~~---~~~~~~~L~~~gI~v~~~~~p 420 (519)
+..++..+.-++|.+.|+++ ....+.. +. .-+.-+.+.... .+ ...+.+.+.+.|+.+. |
T Consensus 343 --~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~----~ 415 (466)
T PRK07030 343 --NVIENNRALARRMAEATAHLADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLR----P 415 (466)
T ss_pred --CHHHHHHHHHHHHHHHHHHHhcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEE----e
Confidence 35677777778888777765 2222221 11 123333332111 01 1346667778999985 2
Q ss_pred CCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 421 GDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 421 ~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
. .+.+|+.++...+ ++|++.+++.+.++++..
T Consensus 416 ~------g~~i~~~Ppl~it----~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 416 L------GSVVYFLPPYVIT----PEQIDFLAEVASEGIDIA 447 (466)
T ss_pred c------CCEEEEECCccCC----HHHHHHHHHHHHHHHHHH
Confidence 1 2479999888888 999999999999999754
No 368
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.28 E-value=4.6e-09 Score=109.71 Aligned_cols=326 Identities=13% Similarity=0.103 Sum_probs=169.3
Q ss_pred cCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+-. .-.|.|.+|+.+.+.... . +...++. +....+++.+.+.. .+. ....+||
T Consensus 54 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~-----~~~~~~~----~~~la~~l~~~~p~-~~~---v~f~~sG 118 (428)
T PRK12389 54 KYIDYLAAYGPIITGHAHPHITKAITEAAENGV--L-----YGTPTEL----EIEFAKMLKEAIPS-LEK---VRFVNSG 118 (428)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC--c-----cCCCCHH----HHHHHHHHHHhCCC-CcE---EEEeCCH
Confidence 3456544422 236888898888776521 0 0011122 22233666666541 222 2556778
Q ss_pred HHHHHHHHHhh--cCCCCEEEEecCCCcc-cccccccccCCcee-----eeeee----eEEEeeeeCCCCCCCCHHHHHH
Q 010058 152 SPANFQVYTAL--LKPHERIMALDLPHGG-HLSHGYQTDTKKIS-----AVSIF----FETMPYRLDESTGYIDYEQLEK 219 (519)
Q Consensus 152 s~a~~~~~~al--l~pGD~Vl~~~~~~~~-~~~~~~~~~~~~v~-----~~g~~----~~~v~~~~d~~~~~iD~d~l~~ 219 (519)
+.|+.+++... .....+|+...-.|-| +............. ..|.. .....++ .-|++.+++
T Consensus 119 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~ 192 (428)
T PRK12389 119 TEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP------FNDIEALKE 192 (428)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcC------CCCHHHHHH
Confidence 87888777744 2334677776643322 21110000000000 00000 0001111 127889988
Q ss_pred Hhhhh--CCcEEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhhhhcc-ccCCCCCCCC-CCeEEEEcCCCc
Q 010058 220 SAALF--RPKLIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLV-AAGVIPSPFE-YADVVTTTTHKS 289 (519)
Q Consensus 220 ~i~~~--k~klIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~-~~~~~~~p~~-~~di~~~S~~K~ 289 (519)
.+.++ ++.+|++.| ++.|...+ +++|+++|+++|+++|+|++|...-. ..+.... ++ ..|+++++ |.
T Consensus 193 ~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~-~gv~PDivt~g--K~ 269 (428)
T PRK12389 193 ALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDL-LGVEPDLTALG--KI 269 (428)
T ss_pred HHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHH-hCCCCCeeeec--hh
Confidence 88642 456677763 33455555 89999999999999999999763211 0000000 01 35888775 98
Q ss_pred ccC-CCcceEEeecccccccccCcchhhhHHHHhhh--cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 010058 290 LRG-PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ--AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSS 366 (519)
Q Consensus 290 l~G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~--~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~ 366 (519)
|+| ...|.+++++ ++.+.+.. ..+.+...+.+....++..+.++.+.++ ...+++.++.+
T Consensus 270 lggG~Pi~av~~~~--------------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~ 332 (428)
T PRK12389 270 IGGGLPIGAYGGRK--------------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGA 332 (428)
T ss_pred hcCCCceeEEeEHH--------------HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHH
Confidence 864 2346667777 55554421 1111111123444455555667776543 35667777788
Q ss_pred HHHHHHHhc----CCEE-ecCCCCcceeeeeccCCCC---------c---HHHHHHhhcccCeEEcccccCCCCCCCCCC
Q 010058 367 KFARSLLER----GYDL-VSGGTENHLVLVNLRNKGI---------D---GSRVEKVLESVHIAANKNTVPGDVSAMVPG 429 (519)
Q Consensus 367 ~l~~~L~~~----g~~~-~~~~~~~~~~~v~~~~~~~---------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 429 (519)
+|.+.|+++ ++.. +..+.. +.-+.+..... + ...+.+.|.++||.+. |.. .+
T Consensus 333 ~l~~~L~~l~~~~~~~~~v~r~~g--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~~-----~~ 401 (428)
T PRK12389 333 MLEEGILEAAEKHGITITINRLKG--ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLA----PSK-----YE 401 (428)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCc--EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEee----cCC-----CC
Confidence 887777653 4321 111111 22233221110 1 2346667778999986 221 11
Q ss_pred eEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 430 GIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 430 ~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.+. ++...+ ++|++++++++++++.
T Consensus 402 ~~~--~~l~~t----~e~id~~~~~l~~~l~ 426 (428)
T PRK12389 402 AWF--LTTAHT----EEDIEETLEAVDRAFA 426 (428)
T ss_pred Cee--ecCCCC----HHHHHHHHHHHHHHHH
Confidence 232 334455 8999999999999885
No 369
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.27 E-value=3.4e-10 Score=106.52 Aligned_cols=348 Identities=13% Similarity=0.144 Sum_probs=212.4
Q ss_pred CCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHH-HHHhhc
Q 010058 85 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQ-VYTALL 163 (519)
Q Consensus 85 en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~-~~~all 163 (519)
-..+|+.+.+.+...++. |+.--....+-|-..++ ...+-+...++.+.|+... +|.+.+.-++|+. ++.++.
T Consensus 76 LGLmPK~t~~~~~~eLDk-Wak~av~gH~~GkvPW~-~~De~il~l~~~iVGA~e~----EvavmNsLTvNlh~Ll~sFy 149 (465)
T KOG3846|consen 76 LGLMPKSTRNSINAELDK-WAKCAVEGHFKGKVPWV-SIDEPILPLLAPIVGAQEN----EVAVMNSLTVNLHSLLISFY 149 (465)
T ss_pred cccCchhhHhHHHHHHHH-HHhhhhhccccccccee-ecchhhhhhhhhhccCCch----hhhhHhhhhhHHHHHHHHhc
Confidence 335788898888887764 32111101111111221 1123445778889999764 3777777776665 555777
Q ss_pred CCCC---EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC--CCCCCHHHHHHHhhhhCC--cEEEEcccc-
Q 010058 164 KPHE---RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES--TGYIDYEQLEKSAALFRP--KLIVAGASA- 235 (519)
Q Consensus 164 ~pGD---~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~--~~~iD~d~l~~~i~~~k~--klIi~~~sn- 235 (519)
+|-. +|+ ++..++.+..|.... .+.+.|+.++..-..+.|. ...+-.++|.+.|....- .+|+++...
T Consensus 150 KPTekR~KIL---lE~kaFPSDhYAies-Q~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqy 225 (465)
T KOG3846|consen 150 KPTEKRFKIL---LEKKAFPSDHYAIES-QCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQY 225 (465)
T ss_pred CCcchhhhhh---hccCCCCchHHHHHh-hhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeeccee
Confidence 7765 455 334444443332222 4556665543322223332 235777888888876333 334444333
Q ss_pred -ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCccc-CCCc-ceEEeeccc--cccccc
Q 010058 236 -YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR-GPRG-AMIFFRKGV--KEINKQ 310 (519)
Q Consensus 236 -~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~-Gprg-G~i~~~~~~--~~~~~~ 310 (519)
+|..+|+.+|...-+..|++|=.|-||+.|-++..++.+ ++|+.+-.+.|.+. |+.| |-+++.+.. ...|.-
T Consensus 226 YTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdW---gVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl 302 (465)
T KOG3846|consen 226 YTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDW---GVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRL 302 (465)
T ss_pred ecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeec---CCceEEEeeecccccCCCccceeeeehhhhcchhhHH
Confidence 589999999996666779999999999999999999999 89999999999884 5554 556666542 223311
Q ss_pred CcchhhhHHHHh--------hhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CC----
Q 010058 311 GQEVMYAYEDKI--------NQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GY---- 377 (519)
Q Consensus 311 g~~~~~~~~~~i--------~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~---- 377 (519)
-|++..+..+++ ........+++|+.+..+|+-.+|+...+-.+++.+++-.-...+|...++.. |.
T Consensus 303 ~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~ 382 (465)
T KOG3846|consen 303 AGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPL 382 (465)
T ss_pred hhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchh
Confidence 111111111111 11222334588999999999999887766556677776666666665555443 33
Q ss_pred -------EEecCC-CC---cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc-CccccCCCCH
Q 010058 378 -------DLVSGG-TE---NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVE 445 (519)
Q Consensus 378 -------~~~~~~-~~---~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~-~~~ttrg~~~ 445 (519)
.++++. ++ ..+ .+.+. .+...+.+.|.++|+.+.+ ..+++||+.. +.+++ .
T Consensus 383 rt~Kl~~~IiTP~~~~erGcQL-sl~Fs---sp~~~vfqeL~krGv~~Dk---------R~PNvIRvAPvpLYN~----f 445 (465)
T KOG3846|consen 383 RTEKLFFTIITPTSTDERGCQL-SLYFS---SPTPKVFQELHKRGVIGDK---------RRPNVIRVAPVPLYNT----F 445 (465)
T ss_pred hhcceeEEEeCCcccccccceE-EEEeC---CCchHHHHHHHHcCeeccc---------cCCCceEeecchhhcc----H
Confidence 233331 11 111 11121 1345688899999999853 4578899975 66788 8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010058 446 EDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 446 ~di~~l~~~l~~~l~~~ 462 (519)
.|+.+++.+|.+++...
T Consensus 446 ~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 446 SDVYIFVNALNEAMDKL 462 (465)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988643
No 370
>PRK07483 hypothetical protein; Provisional
Probab=99.27 E-value=8.7e-09 Score=107.83 Aligned_cols=220 Identities=17% Similarity=0.194 Sum_probs=126.6
Q ss_pred HHHHHHhhh---hCCcEEEEcccc---ccccc----cHHHHHHHHhhcCCEEEehhhhhhhccccCC-CC-CCCC-CCeE
Q 010058 215 EQLEKSAAL---FRPKLIVAGASA---YARLY----DYARIRKVCDKQKAVMLADMAHISGLVAAGV-IP-SPFE-YADV 281 (519)
Q Consensus 215 d~l~~~i~~---~k~klIi~~~sn---~g~~~----d~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~-~p~~-~~di 281 (519)
+++++.+.. .+..+|++.|-. -|... -+++++++|++||+++|+|+.+. |+-..+. .. .-++ ..|+
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDi 264 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDL 264 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhhcCCCCCe
Confidence 566665542 245677776432 23222 38999999999999999999865 3211110 00 0001 3599
Q ss_pred EEEcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhhhc---ccCCCCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 282 VTTTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA---VFPGLQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 282 ~~~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~---~~~~~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
++++ |.|+|. +.|.+++++ ++.+.+... ...+...+.+....++..+.++.+.++ .
T Consensus 265 v~~g--K~l~gG~~Pi~av~~~~--------------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~---~ 325 (443)
T PRK07483 265 VTIA--KGLGAGYQPIGAVLASD--------------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAED---G 325 (443)
T ss_pred eeeh--hhhccCccccEEEEEcH--------------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc---C
Confidence 9987 988654 457777877 454444321 111111122344445555566666543 4
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCEEecC--CCCcceeeeeccCC-----CC-----cHHHHHHhhcccCeEEcccccCCC
Q 010058 357 YQEQVLSNSSKFARSLLER--GYDLVSG--GTENHLVLVNLRNK-----GI-----DGSRVEKVLESVHIAANKNTVPGD 422 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~v~~~~~-----~~-----~~~~~~~~L~~~gI~v~~~~~p~~ 422 (519)
+.+++.+..++|.+.|+++ .+.++.. +. .-+.-+.+... .. ....+.+.+.+.||.+... +.
T Consensus 326 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---~~ 401 (443)
T PRK07483 326 LLANVRARGEQLRARLRERLGQHPHVGDIRGR-GLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPM---GG 401 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeeeEeec-ccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEec---Cc
Confidence 5667777777777777653 2332221 11 12223333211 00 1234667777899998621 11
Q ss_pred C-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 423 V-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 423 ~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
. ....++.|||.++...+ ++|+++++++|.+++...
T Consensus 402 ~~~~~~~~~l~~~PpL~it----~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 402 TIDGVRGDHVLLAPPFIIT----AAQIDEIVERLGDAIDAA 438 (443)
T ss_pred cccCCCCCEEEEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 0 01123679999998888 999999999999999753
No 371
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.24 E-value=5.3e-09 Score=109.93 Aligned_cols=332 Identities=14% Similarity=0.155 Sum_probs=169.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceE-Ee-CCcHHHHHHHHHhh--c
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNV-QS-LSGSPANFQVYTAL--L 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V-~~-~sGs~a~~~~~~al--l 163 (519)
-.|.|.+|+.+.+.+.. .+... .+. ++... ++ .+++.+.+..+... ...+ .+ .||+.|+.+++... .
T Consensus 80 ~~p~v~~Ai~~ql~~~~--~~~~~-~~~-~~~~~---~l-a~~L~~~~p~~~~~-~~~v~f~~~SGSEAve~AlklAr~~ 150 (464)
T PRK06938 80 NHPVVIEAIQQVLADEL--PLHTL-DLT-TPVKD---QF-VQDLFASLPEAFAR-EAKIQFCGPTGTDAVEAALKLVKTA 150 (464)
T ss_pred CCHHHHHHHHHHHHhhh--ccccc-ccC-CHHHH---HH-HHHHHHhCcccccc-cceEEEeCCCcHHHHHHHHHHHHHh
Confidence 47899999998886522 11111 111 12222 22 25555554322100 0024 44 58998888777644 2
Q ss_pred CCCCEEEEecCCC-cccccccccccCCce--eeee--eeeEEEeeeeCCC--------C-CCCCHHHHHHHhhhh-----
Q 010058 164 KPHERIMALDLPH-GGHLSHGYQTDTKKI--SAVS--IFFETMPYRLDES--------T-GYIDYEQLEKSAALF----- 224 (519)
Q Consensus 164 ~pGD~Vl~~~~~~-~~~~~~~~~~~~~~v--~~~g--~~~~~v~~~~d~~--------~-~~iD~d~l~~~i~~~----- 224 (519)
....+|+...-.| |.+............ .+.+ ..+..++++.... . ...+.+.+++.+.+.
T Consensus 151 tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~ 230 (464)
T PRK06938 151 TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVV 230 (464)
T ss_pred hCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCC
Confidence 2346777766433 222111100000000 0000 0122333331100 0 012367788877642
Q ss_pred CCcEEEEcccc--ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCC-CC-CCCC-CCeEEEEcCCCcccC-CC
Q 010058 225 RPKLIVAGASA--YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGV-IP-SPFE-YADVVTTTTHKSLRG-PR 294 (519)
Q Consensus 225 k~klIi~~~sn--~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~-~p~~-~~di~~~S~~K~l~G-pr 294 (519)
++.+|++.|-. -|. ..-+++++++|++||+++|+|+.+. |+-..|. .. .-++ ..|+++++ |.|+| ..
T Consensus 231 ~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~~g--KglggG~P 307 (464)
T PRK06938 231 LPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS-GFGRTGKMFAFEHAGIIPDVVVLS--KAIGGSLP 307 (464)
T ss_pred ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcHHHHHHhcCCCCCEEEee--ccccCCCc
Confidence 35777776432 232 2237999999999999999999864 2211110 00 0001 35999997 88864 23
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
.|.+++++ ++ +.+......+..++ +....++..+.++.+.+. +..+++.+.-++|.+.|++
T Consensus 308 lsAv~~~~--------------~~-~~~~~~~~~~T~~g-npla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~ 368 (464)
T PRK06938 308 LAVVVYRE--------------WL-DTWQPGAHAGTFRG-NQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQ 368 (464)
T ss_pred eEEEeehh--------------Hh-hccCCCCCCCCCCc-CHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHH
Confidence 37777766 33 22221112222232 333344444556665443 4566777777777777766
Q ss_pred c--CCEEecCCC-CcceeeeeccCC-CC---------c---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcc
Q 010058 375 R--GYDLVSGGT-ENHLVLVNLRNK-GI---------D---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPAL 438 (519)
Q Consensus 375 ~--g~~~~~~~~-~~~~~~v~~~~~-~~---------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ 438 (519)
+ ...++..-. ..-+.-+.+... +. + ...+...|.+.||.+. ++.. ..+.||+.++..
T Consensus 369 l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~----~~g~---~~~~l~~~Ppl~ 441 (464)
T PRK06938 369 LQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILE----LGGR---HGSVVRFLPPLI 441 (464)
T ss_pred HHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEe----ecCC---CCCEEEEECCCc
Confidence 4 233332211 112333333211 10 1 2345566778999985 2211 135799998888
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 010058 439 TSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 439 ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.| ++|++++++++.+++..
T Consensus 442 it----~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 442 IT----AEQIDEVAEIFAEAVAA 460 (464)
T ss_pred cC----HHHHHHHHHHHHHHHHH
Confidence 88 99999999999999874
No 372
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.24 E-value=3e-09 Score=111.06 Aligned_cols=311 Identities=14% Similarity=0.150 Sum_probs=161.6
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-cCCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL-LKPH 166 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al-l~pG 166 (519)
-.|.|.+|+.+.+.... . +.. . ...+....+++.+++... +. ....+||+.|+.+++... .-.|
T Consensus 65 ~~p~v~~Ai~~q~~~~~--~------~~~-~--~~~~~~la~~l~~~~p~~-~~---v~f~~sGseA~e~AlklAr~~tg 129 (431)
T PRK06209 65 AYPPVVEAVREALQDGC--N------FTR-P--SAIELDAAESFLELIDGA-DM---VKFCKNGSDATSAAVRLARAYTG 129 (431)
T ss_pred CCHHHHHHHHHHHHhCc--C------CCC-C--CHHHHHHHHHHHHhCCcc-ce---EEEecCHHHHHHHHHHHHHHHhC
Confidence 36888888888776521 0 111 1 112222336666766421 22 256677888888877743 1123
Q ss_pred -CEEEEecCCCcccccccccccCCceeeeeee----eEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEcccc--cc
Q 010058 167 -ERIMALDLPHGGHLSHGYQTDTKKISAVSIF----FETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAGASA--YA 237 (519)
Q Consensus 167 -D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~----~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~~sn--~g 237 (519)
.+|+... .++-|-...++...... ..|.. .....++ .-|++++++.+..+ ++.+|++.+.. .|
T Consensus 130 r~~i~~~~-~~~~h~~~~~~~g~~~~-~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~ 201 (431)
T PRK06209 130 RDLVARCA-DHPFFSTDDWFIGTTPM-SAGIPASVSALTVTFR------YNDIASLEALFEDHPGRIACVILEPATADEP 201 (431)
T ss_pred CCeEEEec-cCccccccccccccCCC-CCCCChhHhccccccC------CCCHHHHHHHHHhCCCCEEEEEEccccCCCC
Confidence 3455441 11111000000000000 00100 0011111 22789999888642 35566665322 34
Q ss_pred ccccHHHHHHHHhhcCCEEEehhhhhhhccccC--CCCCCCC-CCeEEEEcCCCcccC-CCcceEEeecccccccccCcc
Q 010058 238 RLYDYARIRKVCDKQKAVMLADMAHISGLVAAG--VIPSPFE-YADVVTTTTHKSLRG-PRGAMIFFRKGVKEINKQGQE 313 (519)
Q Consensus 238 ~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~--~~~~p~~-~~di~~~S~~K~l~G-prgG~i~~~~~~~~~~~~g~~ 313 (519)
....+++|+++|++||+++|+|++| .|+...+ ... -++ ..|+++++ |.|+| ..+|.+++++
T Consensus 202 ~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~-~~gv~PDi~t~g--K~lggG~p~~av~~~~----------- 266 (431)
T PRK06209 202 QDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQK-LYGIVPDLSCFG--KALGNGFAVSALAGKR----------- 266 (431)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhH-HhCCCcceeeeh--hhhcCCcccEEEEEHH-----------
Confidence 4555999999999999999999998 5543211 110 011 35887765 99865 3467888877
Q ss_pred hhhhHHHH--h---h-hccc-CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh----cCCEE-ec
Q 010058 314 VMYAYEDK--I---N-QAVF-PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE----RGYDL-VS 381 (519)
Q Consensus 314 ~~~~~~~~--i---~-~~~~-~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~-~~ 381 (519)
++.+. + + ...+ .+...+++...+++..++++.+.+++ ..+++.++.++|.+.|++ .++.. +.
T Consensus 267 ---~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr 340 (431)
T PRK06209 267 ---EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHGLQDHVR 340 (431)
T ss_pred ---HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 44432 1 0 0111 11122345566777777888776543 456666666666666654 34332 11
Q ss_pred -CCCCcceeeeeccCCCCcH----HHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 382 -GGTENHLVLVNLRNKGIDG----SRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 382 -~~~~~~~~~v~~~~~~~~~----~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
.+....+.++...+.+.+. ..+.+.|.+.||.+. .++++ ..+| ++|++++++.+.
T Consensus 341 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p--------------~l~is--~~ht----~~dId~~l~~l~ 400 (431)
T PRK06209 341 VSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMP--------------SLVVS--YAHG----DADIERTIDAVH 400 (431)
T ss_pred eecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcccc--------------ccccc--ccCC----HHHHHHHHHHHH
Confidence 1221111122111111111 135566777899762 14554 2445 899999999999
Q ss_pred HHHHHH
Q 010058 457 AAVKLA 462 (519)
Q Consensus 457 ~~l~~~ 462 (519)
+++...
T Consensus 401 ~~l~~~ 406 (431)
T PRK06209 401 GALGVY 406 (431)
T ss_pred HHHHHH
Confidence 999765
No 373
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.23 E-value=3.1e-09 Score=111.03 Aligned_cols=209 Identities=12% Similarity=0.137 Sum_probs=120.7
Q ss_pred CHHHHHHHhhhh--CCcEEEEccc--ccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC----CCCCCC-CC
Q 010058 213 DYEQLEKSAALF--RPKLIVAGAS--AYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV----IPSPFE-YA 279 (519)
Q Consensus 213 D~d~l~~~i~~~--k~klIi~~~s--n~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~----~~~p~~-~~ 279 (519)
+++.+++.+.++ +..+|++.|- +.|...+ +++++++|++||+++|+|++| .|+-..|. ....+. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCC
Confidence 456677777542 4667777633 2454444 899999999999999999997 44322221 001111 36
Q ss_pred eEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHH
Q 010058 280 DVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE 359 (519)
Q Consensus 280 di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~ 359 (519)
|+++++ |.|++ +|+++.++ .+.. . ...+.+...+.+....++..++++.+.+. ...+
T Consensus 316 Di~t~g--K~lg~--gG~~~~~~--------------~~~~-~-~~~~~~~T~~gnp~~~aaa~a~L~~l~~~---~l~~ 372 (464)
T TIGR00699 316 DMVTFS--KKFQT--AGYFFHDP--------------AFRP-N-KPYRQFNTWMGDPSRALILREIIQEIKRK---DLLE 372 (464)
T ss_pred CEEEeh--hhhcc--CCccccch--------------hccC-C-CCcccccCCCCCHHHHHHHHHHHHHHHhc---CHHH
Confidence 998886 98842 25544332 1110 0 01111112233444455555567766543 3456
Q ss_pred HHHHHHHHHHHHHHhcC--CE-EecC--C-CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEe
Q 010058 360 QVLSNSSKFARSLLERG--YD-LVSG--G-TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRM 433 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g--~~-~~~~--~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 433 (519)
++.+.-++|.+.|+++. +. ++.. + ....+.-+.+.... ....+.+.|.+.||.+.. . +.+.|||
T Consensus 373 ~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-~~~~i~~~~~~~Gvl~~~----~-----g~~~ir~ 442 (464)
T TIGR00699 373 NVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-KRDKLLKKARNNGVNIGG----C-----GVKAIRL 442 (464)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-HHHHHHHHHHHCCcEEec----C-----CCCeEEE
Confidence 66666677777776652 33 2222 1 11223334442111 134566777788999962 1 2367999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.++...+ ++|++.++++|.+++
T Consensus 443 ~Ppl~it----~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 443 RPMLVFQ----KHHADIFLEIISKII 464 (464)
T ss_pred eCCCCCC----HHHHHHHHHHHHHhC
Confidence 9998888 999999999998763
No 374
>PRK06148 hypothetical protein; Provisional
Probab=99.20 E-value=7.6e-09 Score=118.36 Aligned_cols=326 Identities=15% Similarity=0.138 Sum_probs=172.5
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCCC
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKPH 166 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~pG 166 (519)
.|.|.+|+.+.+..- ....++ . . +.+....+++.+.+..+.+. ..+++||+.|+.+++... ....
T Consensus 640 hp~v~~Ai~~q~~~l----~~~~~~-~-~----~~~~~lAe~L~~~~p~~~~~---v~f~nSGsEA~e~AlklAr~~tGr 706 (1013)
T PRK06148 640 HPRVVAAAARQAARL----NTNTRY-L-H----DAIVAYAERLTATLPDGLTV---AFFVNSGSEANSLALRLARAHTGQ 706 (1013)
T ss_pred CHHHHHHHHHHHhhc----CCcCCc-C-C----HHHHHHHHHHHHhCCCCcCE---EEEeCCcHHHHHHHHHHHHHhcCC
Confidence 789999998887652 111111 1 1 22223336676766532222 366688888988777654 2334
Q ss_pred CEEEEecCCC-ccccccccccc---CCceeeee--eeeEEEeeeeC-CCCCC-CC-------HHHHHHHhhh-----hCC
Q 010058 167 ERIMALDLPH-GGHLSHGYQTD---TKKISAVS--IFFETMPYRLD-ESTGY-ID-------YEQLEKSAAL-----FRP 226 (519)
Q Consensus 167 D~Vl~~~~~~-~~~~~~~~~~~---~~~v~~~g--~~~~~v~~~~d-~~~~~-iD-------~d~l~~~i~~-----~k~ 226 (519)
.+|+.+...| |.+........ .+.. ..+ ..+..++.+.. ...+. .| .+.+++.+.. .++
T Consensus 707 ~~ii~~~~~YHG~t~~a~s~s~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~i 785 (1013)
T PRK06148 707 RDAIVLDHAYHGTTTELIDLSPYKFNRKG-GKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGP 785 (1013)
T ss_pred CeEEEEcCCccCCCcchhhcCchhhcccC-CCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCce
Confidence 5677766433 22211100000 0000 000 00111111100 00010 01 1345555431 246
Q ss_pred cEEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhh-hhccccC---CCCCCCCCCeEEEEcCCCcccC-CCc
Q 010058 227 KLIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAAG---VIPSPFEYADVVTTTTHKSLRG-PRG 295 (519)
Q Consensus 227 klIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~~---~~~~p~~~~di~~~S~~K~l~G-prg 295 (519)
.+|++.+ .+-|...+ +++++++|+++|+++|+|+.+. .|-.... .....+ ..|+++++ |.|+| ...
T Consensus 786 AAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~g--K~lggG~Pl 862 (1013)
T PRK06148 786 AFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTMG--KPIGNGHPM 862 (1013)
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeeec--ccccCCcce
Confidence 6777763 22343333 8999999999999999999974 2211100 000000 36998886 98864 334
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcc-cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAV-FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
|.+++++ ++.+.+.... +.+..++.. ...++..+.++.+.++ ...+++.+.-++|.+.|++
T Consensus 863 gav~~~~--------------ei~~~~~~g~~~~~Tf~gnp-la~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~ 924 (1013)
T PRK06148 863 GAVVTTR--------------EIADSFDNGMEYFNTFGGNP-VSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRE 924 (1013)
T ss_pred EEEEEcH--------------HHHhhccCCCccccCCCCCH-HHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHH
Confidence 7777877 5555443321 223333333 3344444557766543 4567777777888887776
Q ss_pred c--CCEEecC--CCCcceeeeeccCCC----Cc---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 375 R--GYDLVSG--GTENHLVLVNLRNKG----ID---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 375 ~--g~~~~~~--~~~~~~~~v~~~~~~----~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
+ .+.++.. |. ..+.-+.+.... .+ ...+.+.|.+.||.+... |. ..+.|||.++...|
T Consensus 925 l~~~~~~i~~VrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g~----~~~vlr~~Ppl~it--- 993 (1013)
T PRK06148 925 LQDRFDIIGDVRGM-GLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE---GP----HDNVLKIRPPLIFS--- 993 (1013)
T ss_pred HHHhCCCceEEeee-ceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc---CC----CCCEEEEeCCccCC---
Confidence 5 2222221 11 123333332110 11 234666777899999621 11 13679999988888
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|++++..
T Consensus 994 -~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 994 -RADADHLLEVLDDVLAA 1010 (1013)
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 99999999999999864
No 375
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.19 E-value=2.1e-09 Score=104.68 Aligned_cols=341 Identities=13% Similarity=0.098 Sum_probs=192.0
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH-H-H
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS-P-A 154 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs-~-a 154 (519)
..++.+++..+|++|++...+.+.+....|.+- .+.+.+ +....+-..+++.++++++++.+. .|.+..|+ + .
T Consensus 6 ~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRs-k~~~~v~~~a~~~lreLl~iPd~Y---~VlflqGGat~q 81 (365)
T COG1932 6 VYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRS-KEFKNVLEEAEKDLRELLNIPDDY---KVLFLQGGATGQ 81 (365)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeecccc-HHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCccHHH
Confidence 457888888899999999998887744223221 111111 333445566779999999997653 46666655 3 5
Q ss_pred HHHHHHhhcCCCCE--EEEecCCCcccccccccccCCceeeeeeeeEEEeee-eCC-CCCCCCHHHHHHHhhhhCCcEEE
Q 010058 155 NFQVYTALLKPHER--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LDE-STGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 155 ~~~~~~all~pGD~--Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~-~d~-~~~~iD~d~l~~~i~~~k~klIi 230 (519)
..++...|+.++.. |....-+. .++ +-++..+......... ... -+...|++... +.+ +..-|.
T Consensus 82 f~~~p~nLl~~~~~~yv~~g~Ws~-----~a~----~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ayv~ 149 (365)
T COG1932 82 FAMAPMNLLGKRGTDYVDTGAWSE-----FAI----KEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAYVH 149 (365)
T ss_pred HHHHHHhhhcccCceeEeeeehhH-----hHH----HHHHHhcccccccccceeccCccCCCChhhcc--cCC-CccEEE
Confidence 66677888766543 44322110 000 0111111100000000 111 12234554433 222 333466
Q ss_pred Ecccc--ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--
Q 010058 231 AGASA--YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK-- 305 (519)
Q Consensus 231 ~~~sn--~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~-- 305 (519)
+++++ +|..++ +.-.+.. +.++++|++........++. ..|+++++.+|.+ ||-| ++++.+++..
T Consensus 150 ~~~NeTi~Gv~v~--~~p~~~~--~~~~v~D~SS~ilsr~iDvs-----k~dviyagaQKnl-GpaGltvvIvr~~~l~r 219 (365)
T COG1932 150 FCWNETISGVEVP--ELPDIGS--DGLLVADASSAILSRPIDVS-----KYDVIYAGAQKNL-GPAGLTVVIVRPDLLER 219 (365)
T ss_pred EecCCcccceEcc--CCCCCCC--CceEEEecccHHhcCCCChh-----HcceEEEehhhcc-CccceEEEEEcHHHHhc
Confidence 76555 575444 2112222 28999999855444444333 5699999999997 5566 8888888531
Q ss_pred cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcCCEE--ecC
Q 010058 306 EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERGYDL--VSG 382 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~ 382 (519)
..+.. -...+++.. ......+.-||++..+.-+...++.+... +.+.+.++-.++++.|++.+.+.+|-. +.+
T Consensus 220 ~~~~~-~P~if~y~~---~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~ 295 (365)
T COG1932 220 AESYT-LPSIFDYLT---HADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAK 295 (365)
T ss_pred ccccC-CchHhhchh---hhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence 10000 000001111 11112233688888888888888877655 579999999999999999999885422 222
Q ss_pred CCCc-ceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 383 GTEN-HLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 383 ~~~~-~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..-+ ..+.+.+....++ +.+...++++|+..-+ |+ ...+++|++...... .++++.++++++...+
T Consensus 296 ~~RS~mnV~f~~~~~~ld-~~fv~eae~~gl~~lk----Gh---r~vgGmRasiynA~~----~e~veaL~~fm~~f~~ 362 (365)
T COG1932 296 ANRSRMNVTFTLVDAELD-KGFVAEAEAAGLIYLK----GH---RSVGGLRASIYNAVP----LEDVEALTDFMDWFEE 362 (365)
T ss_pred hhccceeEEEEcCcHHHH-HHHHHHHHHcCCceec----cc---cCCCceeeeeecCCC----HHHHHHHHHHHHHHHH
Confidence 1111 2233333333343 3344555566766542 32 345679999765544 7999999999988765
No 376
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.18 E-value=2.9e-08 Score=104.28 Aligned_cols=204 Identities=16% Similarity=0.228 Sum_probs=114.6
Q ss_pred CCcEEEEcccc--ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCC--CCCCCC-CCeEEEEcCCCcccCC-C
Q 010058 225 RPKLIVAGASA--YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGV--IPSPFE-YADVVTTTTHKSLRGP-R 294 (519)
Q Consensus 225 k~klIi~~~sn--~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~p~~-~~di~~~S~~K~l~Gp-r 294 (519)
+..+||+.|-. -|. ..-+++++++|++||+++|+|+.+. |+-..+. .-.-++ ..|+++++ |.|+|. +
T Consensus 225 ~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~t-GfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~P 301 (459)
T PRK06931 225 KPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQA-GFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLP 301 (459)
T ss_pred ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-cCCcCchHHHhhhcCCCCCEEEec--ccccCCcc
Confidence 35677776322 332 2238999999999999999999864 2211110 000000 35999987 888542 3
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
.|.+++++ ++ +.+......+.++ .+....++..+.++.+.+. ...+++.+.-++|.+.|++
T Consensus 302 i~av~~~~--------------~~-~~~~~~~~~~T~~-gnpla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~ 362 (459)
T PRK06931 302 LAVLGIKK--------------EF-DAWQPGGHTGTFR-GNQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAE 362 (459)
T ss_pred eeeeeeHH--------------HH-hhccCCCCCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHH
Confidence 36666665 32 2222111222222 2334444444566665443 3456666666777777665
Q ss_pred c--CCEEecC--CCCcceeeeeccCC-C-------C--c---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCc
Q 010058 375 R--GYDLVSG--GTENHLVLVNLRNK-G-------I--D---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPA 437 (519)
Q Consensus 375 ~--g~~~~~~--~~~~~~~~v~~~~~-~-------~--~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~ 437 (519)
+ ...++.. +. .-+.-+.+... . . + ...+...|.+.||.+. +.. ...+.+|+.++.
T Consensus 363 l~~~~~~i~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~----~~~---~~~~~l~~~Ppl 434 (459)
T PRK06931 363 LQKRYPCIGNVRGR-GLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLE----RGG---RNGNVVRLLPPL 434 (459)
T ss_pred HHHhCCCeEeEecC-ceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEe----ecC---CCCCEEEEECCC
Confidence 4 2222221 11 12233333211 0 0 1 2345566778999985 221 123679999988
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 438 LTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 438 ~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
..+ ++|++.+++++.+++...
T Consensus 435 ~it----~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 435 LIT----QAECEEFIDRFEQALLAA 455 (459)
T ss_pred CcC----HHHHHHHHHHHHHHHHHH
Confidence 888 999999999999999753
No 377
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.16 E-value=2.2e-08 Score=104.67 Aligned_cols=209 Identities=15% Similarity=0.154 Sum_probs=116.3
Q ss_pred HHHHHHHhhh--hCCcEEEEccc--cccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEE
Q 010058 214 YEQLEKSAAL--FRPKLIVAGAS--AYAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVV 282 (519)
Q Consensus 214 ~d~l~~~i~~--~k~klIi~~~s--n~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~ 282 (519)
++++++.+.. .++.+|++.|- +.|. ...+++|+++|++||+++|+|+++. |+-..|.. -.-++ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence 4555666642 35778887732 2342 2358999999999999999999986 33222110 00011 46999
Q ss_pred EEcCCCcccCCCcceEEeecccccccccCcchhhhHHH-Hhh-hcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHH
Q 010058 283 TTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYED-KIN-QAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQ 360 (519)
Q Consensus 283 ~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~-~i~-~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~ 360 (519)
+++ |.+ |-+|++..++ +. ++.. .+. .....+..+ .+....++..++++.+.+.+ ..++
T Consensus 284 ~~g--K~~--~~~g~~~~~~-i~-----------~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~~---l~~~ 343 (431)
T TIGR03251 284 AFG--KKT--QVCGIMAGRR-VD-----------EVADNVFAVPSRLNSTWG-GNLVDMVRATRILEIIEEER---LVDN 343 (431)
T ss_pred Eec--ccC--ccceEEecch-HH-----------HhhhhcccCccccCCCCC-CCHHHHHHHHHHHHHHHhcC---HHHH
Confidence 876 654 4456665443 10 1111 000 001112222 23444555556677665433 3445
Q ss_pred HHHHHHHHHHHHHhc--CCE-EecCCC-CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccC
Q 010058 361 VLSNSSKFARSLLER--GYD-LVSGGT-ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTP 436 (519)
Q Consensus 361 ~~~~~~~l~~~L~~~--g~~-~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~ 436 (519)
+.+..++|.+.|+++ .+. ++.... ...+..+.+.... ....+.+.|.+.||.+. |. ....+|++++
T Consensus 344 ~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~----~~-----g~~~lr~~P~ 413 (431)
T TIGR03251 344 ARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-DRDEVIRQLYREGVLLL----GC-----GERSIRFRPP 413 (431)
T ss_pred HHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-HHHHHHHHHHhCCeEEe----cC-----CCCeEEEECC
Confidence 555555666555543 122 222211 1223344443211 23457777888999985 22 1356999999
Q ss_pred ccccCCCCHHHHHHHHHHHHH
Q 010058 437 ALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 437 ~~ttrg~~~~di~~l~~~l~~ 457 (519)
..++ ++|++++++.|.+
T Consensus 414 l~~t----~~eid~~l~~l~~ 430 (431)
T TIGR03251 414 LTVT----REEIDAAIDAIRR 430 (431)
T ss_pred ccCC----HHHHHHHHHHHHh
Confidence 8888 9999999999875
No 378
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.11 E-value=1.5e-09 Score=107.78 Aligned_cols=296 Identities=17% Similarity=0.163 Sum_probs=165.4
Q ss_pred HHHHHHcCCCCCCCcceEEeCCcHH--HHHHHHHhhc--CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeee
Q 010058 129 KRALDAFQLDPAKWGVNVQSLSGSP--ANFQVYTALL--KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 204 (519)
Q Consensus 129 ~~~~~~~g~~~~~~~~~V~~~sGs~--a~~~~~~all--~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~ 204 (519)
.-+.+..|+.... ..++...++ .+..++.++- ..++.|+.+..+|.+-+. .+..+|..+..|+..
T Consensus 63 ~d~~~~~G~~~~~---~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~k--------ai~~AGl~~~vV~~~ 131 (389)
T PF05889_consen 63 LDALRLAGLRSVK---SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFK--------AIERAGLEPVVVENV 131 (389)
T ss_dssp HHHHHHTTHTTHC---EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHH--------HHHHTT-EEEEE-EE
T ss_pred HHHHHHcCCcccc---ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHH--------HHHhcCCeEEEeecc
Confidence 4444678886422 355565555 3333555553 567889988866654332 456668777788765
Q ss_pred eCCCCCCCCHHHHHHHhhhhC--CcEEEEc-ccc-cccccc-HHHHHHHHhhcCCEEEehhhhhh------hccccCCCC
Q 010058 205 LDESTGYIDYEQLEKSAALFR--PKLIVAG-ASA-YARLYD-YARIRKVCDKQKAVMLADMAHIS------GLVAAGVIP 273 (519)
Q Consensus 205 ~d~~~~~iD~d~l~~~i~~~k--~klIi~~-~sn-~g~~~d-~~~i~~ia~~~~~~livD~ah~~------g~~~~~~~~ 273 (519)
.+++.-..|.+.+++.+++.. +.+.+++ .+. +|+..| +++|++||+++|++.++..|+.. ..+.....
T Consensus 132 ~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~- 210 (389)
T PF05889_consen 132 LEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWR- 210 (389)
T ss_dssp EETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHH-
T ss_pred CCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHh-
Confidence 555545678899999987643 3455555 333 788888 99999999999999999998654 00100000
Q ss_pred CCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCC-CCccHHHHHHHHHHHHHhcCH
Q 010058 274 SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQ-GGPHNHTISGLAVALKQVKTP 352 (519)
Q Consensus 274 ~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~-g~~~~~~iaal~~al~~~~~~ 352 (519)
.+..|+++-|+-|.|--|-||-+++..+- .....+.+ .+|+.. .+|.... ...+..+...
T Consensus 211 --~GRvda~vqS~dkNF~VPvGgai~As~~~------------~~i~~vs~-~YpGRas~sp~ld~----~itLl~LG~~ 271 (389)
T PF05889_consen 211 --VGRVDAFVQSTDKNFMVPVGGAIMASFDP------------SGILAVSK-EYPGRASASPSLDL----FITLLSLGCT 271 (389)
T ss_dssp --HSTCSEEEEEHHHHHCEESSHEEEEESSH------------HHHHHHHH-TSHSHBTSHHHHHH----HHHHHHHHHH
T ss_pred --cCCcceeeeecCCCEEecCCCcEEEecCH------------HHHHHHHH-HhhhhhhcccchHH----HHHHHHHhhh
Confidence 11568999999999988888655554421 34444443 355543 3333332 2233333345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc----CCEEecCCCCcceee-eeccCC-C---CcHHHHHHhhcccCeEEcccccCCCC
Q 010058 353 EYKAYQEQVLSNSSKFARSLLER----GYDLVSGGTENHLVL-VNLRNK-G---IDGSRVEKVLESVHIAANKNTVPGDV 423 (519)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~-v~~~~~-~---~~~~~~~~~L~~~gI~v~~~~~p~~~ 423 (519)
+|.....+..+...++.+.|++. |-.+ ...+.||..+ +++... . -+...+...|..+||.-.+...|...
T Consensus 272 g~~~ll~~r~~~f~~l~erl~~~aee~~e~l-l~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~ 350 (389)
T PF05889_consen 272 GYGALLKERKASFPYLKERLKKWAEEVGERL-LETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGK 350 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTEEB-SSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCC
Confidence 67777777777777777777654 5333 3223344432 333221 1 13457788888877653221122221
Q ss_pred ------CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 424 ------SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 424 ------~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+.....++-+. .+.|++.+|++.+++.|+++++
T Consensus 351 ~~tsh~~~yp~~Ylt~A----saiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 351 KQTSHSSNYPCPYLTAA----SAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEETTSS--SSSEEEEE----E-TT--HHHHHHHHHHHHHHHH
T ss_pred cccccCCCCchHHHHHH----HHhCCCHHHHHHHHHHHHHHhC
Confidence 11112344442 3468889999999999999874
No 379
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.08 E-value=8.4e-08 Score=100.46 Aligned_cols=212 Identities=16% Similarity=0.170 Sum_probs=120.6
Q ss_pred HHHHHHHhhh--hCCcEEEEccc--cccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEE
Q 010058 214 YEQLEKSAAL--FRPKLIVAGAS--AYAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVV 282 (519)
Q Consensus 214 ~d~l~~~i~~--~k~klIi~~~s--n~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~ 282 (519)
++++++.+.. .++.+|++.|- +-|. ...+++++++|++||+++|+|+.+. |+-..+.. ..-++ ..|++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 290 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDIV 290 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCEE
Confidence 4566666653 35778887732 2332 3458999999999999999999975 33111100 00001 35999
Q ss_pred EEcCCCcccCCCcceEEeecccccccccCcchhhhHHH-Hhh-hcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHH
Q 010058 283 TTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYED-KIN-QAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQ 360 (519)
Q Consensus 283 ~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~-~i~-~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~ 360 (519)
+++ |.+ |-+|++..++ +. ++.. .+. .....+..+ .+....++..++++.+.+. ...++
T Consensus 291 ~~g--K~l--~~~a~l~~~~-i~-----------~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~---~l~~~ 350 (443)
T PRK08297 291 AFG--KKT--QVCGIMAGRR-VD-----------EVEDNVFAVSSRINSTWG-GNLVDMVRARRILEVIEED---GLVEN 350 (443)
T ss_pred Eec--ccc--cccceecchH-HH-----------HhhhhhccCccccCCCCC-ccHHHHHHHHHHHHHHHhc---CHHHH
Confidence 876 877 3356665443 10 1111 110 001111222 2334444445566655433 45566
Q ss_pred HHHHHHHHHHHHHhc--CCEEec---CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc
Q 010058 361 VLSNSSKFARSLLER--GYDLVS---GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT 435 (519)
Q Consensus 361 ~~~~~~~l~~~L~~~--g~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~ 435 (519)
+.+..++|.+.|+++ .+..+. .+. ..+..+.+.... ....+.+.|.+.||.+. |.. ...+|+.+
T Consensus 351 ~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~----~~~-----~~~lr~~P 419 (443)
T PRK08297 351 AARQGEYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTTA-DRDEVIRRLWEEGVLVL----PCG-----ERSIRFRP 419 (443)
T ss_pred HHHHHHHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCHH-HHHHHHHHHHHCCEEEe----cCC-----CCeEEEEC
Confidence 677777777777654 122111 122 234445553211 23456777778999985 321 25699998
Q ss_pred CccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+...+ ++|++++++.|.+++..
T Consensus 420 ~l~~t----~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 420 ALTVT----TEEIDAAIDALRRALPE 441 (443)
T ss_pred CccCC----HHHHHHHHHHHHHHHHh
Confidence 87777 99999999999998863
No 380
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.07 E-value=1.5e-08 Score=111.51 Aligned_cols=285 Identities=18% Similarity=0.131 Sum_probs=172.0
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-cCC--CCEEEEecCCCcccccccccccCCceeeeeeeeEEE
Q 010058 126 LCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-LKP--HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 201 (519)
Q Consensus 126 ~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-l~p--GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v 201 (519)
.-+..++++.|.+. +|-....|++ +-.+++++. ... ..+|++.+..|+.+..-.. + .+.+..++.+
T Consensus 128 e~Qtmi~~LtGm~v----aNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~-t-----~~~~~g~~i~ 197 (954)
T PRK12566 128 NFQQMTIDLTGLDL----ANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLR-T-----RAEGFGFELV 197 (954)
T ss_pred HHHHHHHHHhCchh----hhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHH-H-----hhhcCCcEEE
Confidence 45688999999986 3555666766 344455454 222 5678887766644432110 0 0111111111
Q ss_pred eeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CC
Q 010058 202 PYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YA 279 (519)
Q Consensus 202 ~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~ 279 (519)
.+++++.+.+ ++..|++..+| +|.+.|+++|.+++++.|+++++ .+ ..++.++...|-+ ++
T Consensus 198 ------------~~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~-~~---d~laL~ll~~Pge~GA 260 (954)
T PRK12566 198 ------------VDAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACV-AA---DLLSLLVLTPPGELGA 260 (954)
T ss_pred ------------EcchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEE-Ee---CHHHHhCCCChhhcCC
Confidence 1334444444 57777777555 89999999999999999998764 22 2233333333433 79
Q ss_pred eEEEEcCCC-----cccCCCcceEEeeccc-cccc--ccCcch-----------hhhHHHHhhhcccCCCCCCccHHHHH
Q 010058 280 DVVTTTTHK-----SLRGPRGAMIFFRKGV-KEIN--KQGQEV-----------MYAYEDKINQAVFPGLQGGPHNHTIS 340 (519)
Q Consensus 280 di~~~S~~K-----~l~GprgG~i~~~~~~-~~~~--~~g~~~-----------~~~~~~~i~~~~~~~~~g~~~~~~ia 340 (519)
||++++.+- +++||..|++.++++. +..| +.|.+. ...-++.|++..-....+| ...+.
T Consensus 261 DI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT--~qaL~ 338 (954)
T PRK12566 261 DVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICT--AQVLL 338 (954)
T ss_pred cEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhH--HHHHH
Confidence 999886553 4578888999999865 3334 333221 1122233433322211111 23334
Q ss_pred HHHHHHH--HhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccc
Q 010058 341 GLAVALK--QVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNT 418 (519)
Q Consensus 341 al~~al~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~ 418 (519)
|+.+++- +....+++++.+++..++.+|++.|.+.|+++... .++--+.+.. +.+..++.+...+.||.++..
T Consensus 339 A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~---~fF~~~~v~~-~~~~~~~~~~a~~~~~n~r~~- 413 (954)
T PRK12566 339 ANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR---HFFDTLTLEV-GGAQAAIIESAEAARINLRIL- 413 (954)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CccceEEEEc-cCCHHHHHHHHHHCCCeeEEe-
Confidence 4444433 34566789999999999999999999999987653 2232222222 213556666666789988731
Q ss_pred cCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 419 VPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 419 ~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
..+.+.+++...++ ++|++.+.+++.
T Consensus 414 --------~~~~~~~s~de~~~----~~~~~~~~~~f~ 439 (954)
T PRK12566 414 --------GRGRLGVSLDETCD----EATVARLFDIFL 439 (954)
T ss_pred --------CCCeEEEEeCCCCC----HHHHHHHHHHhc
Confidence 13468899888888 899999999984
No 381
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.06 E-value=6.8e-08 Score=106.94 Aligned_cols=214 Identities=16% Similarity=0.099 Sum_probs=122.0
Q ss_pred HHHHHHhhh-------hCCcEEEEccc--cc-cccc----cHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-
Q 010058 215 EQLEKSAAL-------FRPKLIVAGAS--AY-ARLY----DYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE- 277 (519)
Q Consensus 215 d~l~~~i~~-------~k~klIi~~~s--n~-g~~~----d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~- 277 (519)
+.+++.+.+ .+..+||+.|- .. |... -+++++++|++||+++|+|+.+. |+-..|.. -.-++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~T-GfGRtG~~fa~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFT-GLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeeccc-CCCcccchhhHHhcCC
Confidence 556666642 24567777663 32 4322 27899999999999999999853 33222110 00001
Q ss_pred CCeEEEEcCCCcccCC--CcceEEeecccccccccCcchhhhHHHHhhh-----cccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 278 YADVVTTTTHKSLRGP--RGAMIFFRKGVKEINKQGQEVMYAYEDKINQ-----AVFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 278 ~~di~~~S~~K~l~Gp--rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~-----~~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
..|+++++ |.|+|. ..|.+++++ ++.+.+.. ..+.+...+-|....++..++|+.+.
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~--------------~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~ 709 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATE--------------EVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYK 709 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcH--------------HHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHH
Confidence 35999998 998654 457777777 44444321 11222223334445555556677766
Q ss_pred CHhH-HHHHHHHHHHHHHHHHHHH-hc-CCEEecCCC-CcceeeeeccCC----CCc---HHHHHHhhc-ccCeEEcccc
Q 010058 351 TPEY-KAYQEQVLSNSSKFARSLL-ER-GYDLVSGGT-ENHLVLVNLRNK----GID---GSRVEKVLE-SVHIAANKNT 418 (519)
Q Consensus 351 ~~~~-~~~~~~~~~~~~~l~~~L~-~~-g~~~~~~~~-~~~~~~v~~~~~----~~~---~~~~~~~L~-~~gI~v~~~~ 418 (519)
+++. +...++..+..+.+.+.|. .+ ..+.+..-. -.-+.-+.+... +.+ +..+.+.+. +.||.++
T Consensus 710 ~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r--- 786 (817)
T PLN02974 710 DPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYAR--- 786 (817)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEE---
Confidence 5432 3444555555555555552 21 122222100 112333444321 111 235666677 8999997
Q ss_pred cCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 419 VPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 419 ~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
|. .+.||+..+.+++ ++|++++++.|.+.+
T Consensus 787 -~~------Gnvi~l~pP~~i~----~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 787 -PL------GNVVYLMCGPTTS----PETCTRLLRKVYRRL 816 (817)
T ss_pred -ec------CCEEEEeCCCCCC----HHHHHHHHHHHHHHh
Confidence 21 2579998888888 999999999998765
No 382
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.03 E-value=5.1e-09 Score=102.99 Aligned_cols=249 Identities=18% Similarity=0.199 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh---cCCC----------CEEEEe-cCCCccccccccc
Q 010058 120 IDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL---LKPH----------ERIMAL-DLPHGGHLSHGYQ 185 (519)
Q Consensus 120 ~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al---l~pG----------D~Vl~~-~~~~~~~~~~~~~ 185 (519)
...+|......+.++.|.+... +.|....|+.+|+.++.+. .-|+ +-|+.. +.+|.+...
T Consensus 139 F~lmE~~vl~km~~ivGw~~~~--DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k---- 212 (510)
T KOG0629|consen 139 FVLMEEEVLAKMREIVGWEEGG--DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKK---- 212 (510)
T ss_pred EEeehHHHHHHHHHHhCCCCCC--CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHH----
Confidence 3446667778888899997642 3566666666777655543 1132 334432 323333322
Q ss_pred ccCCceeeeee---eeEEEeeeeCCCCCCCCHHHHHHHhhhhC-----CcEEEEc-ccc-ccccccHHHHHHHHhhcCCE
Q 010058 186 TDTKKISAVSI---FFETMPYRLDESTGYIDYEQLEKSAALFR-----PKLIVAG-ASA-YARLYDYARIRKVCDKQKAV 255 (519)
Q Consensus 186 ~~~~~v~~~g~---~~~~v~~~~d~~~~~iD~d~l~~~i~~~k-----~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~ 255 (519)
...+.|. .+..| +.| +.|.+++++||+.|.+.+ |-+|-++ .+. +|...|+..|+++|++|+.|
T Consensus 213 ----aAa~lg~gtd~c~~v--~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lW 285 (510)
T KOG0629|consen 213 ----AAAFLGLGTDHCIKV--KTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLW 285 (510)
T ss_pred ----HHHHhccCCceeEEe--ccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEE
Confidence 2222332 23333 334 568999999999987543 3334343 333 79999999999999999999
Q ss_pred EEehhhhhhhccccCCCC---CCCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHH--Hhhhccc--
Q 010058 256 MLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYED--KINQAVF-- 327 (519)
Q Consensus 256 livD~ah~~g~~~~~~~~---~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~--~i~~~~~-- 327 (519)
+++|+|...|+.-...+. ..++.++.++-+.||.++.|-. +.++++.+-.+.......-.|-+.. ..+-...
T Consensus 286 mHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTg 365 (510)
T KOG0629|consen 286 MHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTG 365 (510)
T ss_pred EEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccc
Confidence 999999776665433322 2344689999999999977755 6666665311000000000000000 0000000
Q ss_pred -CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecC
Q 010058 328 -PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSG 382 (519)
Q Consensus 328 -~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 382 (519)
-..|.+.+... .-+..-++.-...+|++.+++..+++++|.+.|++. |+..+..
T Consensus 366 dK~iQCGRh~D~-FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~ 421 (510)
T KOG0629|consen 366 DKAIQCGRHVDV-FKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFE 421 (510)
T ss_pred cchhhcCccccH-HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhc
Confidence 01122222221 123444454556789999999999999999999999 6666554
No 383
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.97 E-value=9.2e-08 Score=93.54 Aligned_cols=181 Identities=23% Similarity=0.293 Sum_probs=114.8
Q ss_pred HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC----CCeEEEEcCCCccc-CCCcceEEeecccccccccCcchhh
Q 010058 242 YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE----YADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQGQEVMY 316 (519)
Q Consensus 242 ~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~----~~di~~~S~~K~l~-GprgG~i~~~~~~~~~~~~g~~~~~ 316 (519)
+++..++|+++|.++|.|+++. |.-..| +-+.|+ -.||+|.+ |+++ |...|.+++.+
T Consensus 235 lka~~~~v~k~Ggl~IaDEVqt-GfGRtG-~~wgfe~h~v~PDIvTmA--KgiGnG~Pl~AVvtt~-------------- 296 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQT-GFGRTG-HMWGFESHGVVPDIVTMA--KGIGNGFPLGAVVTTP-------------- 296 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhhh-cccccc-ccccccccCCCccHHHHH--hhccCCCcceeeecCH--------------
Confidence 8999999999999999999964 333333 333333 24777766 8884 44447777777
Q ss_pred hHHHHhhhcc-cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCccee----
Q 010058 317 AYEDKINQAV-FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYDLVSGGTENHLV---- 389 (519)
Q Consensus 317 ~~~~~i~~~~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~---- 389 (519)
++.+-+++.. +-...|+.++...++++ .|+-+. -++++++..+...+|.+.|.++ +.+++.+-....+.
T Consensus 297 EIa~v~~~~~~~fnTyggnP~a~avg~a-VL~Vik---ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE 372 (442)
T KOG1404|consen 297 EIADVLNQKSSHFNTYGGNPVACAVGLA-VLKVIK---EENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVE 372 (442)
T ss_pred HHHHHHHhccccccccCCCchhHHHHHH-HHHHHH---HHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEE
Confidence 5666665544 22233454554444443 345443 2567777888888888888876 56666542222222
Q ss_pred eeecc--CCC---CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 390 LVNLR--NKG---IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 390 ~v~~~--~~~---~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
+++-+ +.. .-+..+-+.+.+.|+.+.+..+-| ..+||.++.+.| .+|++.+++..
T Consensus 373 ~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G-------~vfriaPPlciT----~edi~f~~~~~ 432 (442)
T KOG1404|consen 373 LVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG-------NVFRIAPPLCIT----KEDIDFAVEYF 432 (442)
T ss_pred EecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc-------eEEEecCCeecc----HHHHHHHHHHH
Confidence 23222 111 113346677888999997654443 379999999888 89997777655
No 384
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.83 E-value=4.8e-06 Score=83.39 Aligned_cols=323 Identities=15% Similarity=0.114 Sum_probs=181.9
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCC------CCcceEEeCCcHHHHHHHHHhh-------cCCC-----------CEEE
Q 010058 115 GGNEYIDMAESLCQKRALDAFQLDPA------KWGVNVQSLSGSPANFQVYTAL-------LKPH-----------ERIM 170 (519)
Q Consensus 115 ~~~~~~~~le~~~~~~~~~~~g~~~~------~~~~~V~~~sGs~a~~~~~~al-------l~pG-----------D~Vl 170 (519)
..++...+||...-+|+.+++++... .-|-.|+.+|.+.+++.++.+- ++.+ +-|+
T Consensus 106 ~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 106 ASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred ecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 44566789999999999999998421 1123466666666555444432 2222 2233
Q ss_pred -EecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhC-----CcEEEEc--cccccccccH
Q 010058 171 -ALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFR-----PKLIVAG--ASAYARLYDY 242 (519)
Q Consensus 171 -~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k-----~klIi~~--~sn~g~~~d~ 242 (519)
..+..|.+.-. +..+.|...+.++ .| +++.++-+.|+++|.+.. |-.|+.+ .++.-...++
T Consensus 186 Y~SDqahssvek--------a~~i~~VklR~l~--td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l 254 (511)
T KOG0628|consen 186 YCSDQAHSSVEK--------ACLIAGVKLRALP--TD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDEL 254 (511)
T ss_pred EecCcccchHHH--------hHhhcceeEEEee--cc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccH
Confidence 33433333222 3334455555554 34 368899999999998643 3334444 2223366779
Q ss_pred HHHHHHHhhcCCEEEehhhhhhhccccC---CCCCCCCCCeEEEEcCCCcccCC-CcceEEeeccccccc-ccCcchhhh
Q 010058 243 ARIRKVCDKQKAVMLADMAHISGLVAAG---VIPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKGVKEIN-KQGQEVMYA 317 (519)
Q Consensus 243 ~~i~~ia~~~~~~livD~ah~~g~~~~~---~~~~p~~~~di~~~S~~K~l~Gp-rgG~i~~~~~~~~~~-~~g~~~~~~ 317 (519)
.+|..+|+++|+||++|+|++....... ..-..++++|-+.+..|||+.-- ...-+..+++..+.. +.-... .
T Consensus 255 ~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~--y 332 (511)
T KOG0628|consen 255 EELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPL--Y 332 (511)
T ss_pred HHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChH--h
Confidence 9999999999999999999653332221 11234558999999999986321 113334444311110 000000 0
Q ss_pred HHHHhhhcccCCC-CCCccHHHHHHHH--HHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeec
Q 010058 318 YEDKINQAVFPGL-QGGPHNHTISGLA--VALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNL 393 (519)
Q Consensus 318 ~~~~i~~~~~~~~-~g~~~~~~iaal~--~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~ 393 (519)
+.........+.. ..-|....+-++. .-++.+.-+.+++++++..+.++.+.+.+.+- -|+++. ..++.++.+
T Consensus 333 L~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~---~~~lgLvcF 409 (511)
T KOG0628|consen 333 LKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVN---KRILGLVCF 409 (511)
T ss_pred hcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeec---ccccceeEE
Confidence 0000000001111 1233333444443 34455555567777777788888877766554 577764 346778887
Q ss_pred cCCCCc--HHHHHHhhcc-cCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 394 RNKGID--GSRVEKVLES-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 394 ~~~~~~--~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+.++.+ .+.+.+.+.. ..|.+.+..+- +.-.||+......+ +++||++--+.|.+.....
T Consensus 410 Rlk~~N~~ne~Ll~~in~~g~i~l~~~~l~------gk~vlRf~V~s~~t---~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 410 RLKGDNEINEALLNRLNSSGRIHLVPASLH------GKFVLRFAVCSPLT---NESDIDEAWKIIFEAADEL 472 (511)
T ss_pred eecCCcHHHHHHHHHHHhcCcEEEEEeeec------ceEEEEEEecCCCC---cHHHHHHHHHHHHHHHHHH
Confidence 766533 2345555544 56766432221 23358987655433 2899999999998887754
No 385
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.77 E-value=3.8e-07 Score=87.76 Aligned_cols=330 Identities=18% Similarity=0.199 Sum_probs=195.0
Q ss_pred cCeeecCC-------CCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC-----CCCcc
Q 010058 77 KGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDP-----AKWGV 144 (519)
Q Consensus 77 ~~i~L~a~-------en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~-----~~~~~ 144 (519)
.-|||..+ .+++-+.|++|-.+...... .. -|..-.++.++..++.+. .||.+. ... +
T Consensus 53 ~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~l-----dK-EYlpI~Gl~eF~k~sakL---a~G~~s~~ik~~Ri-~ 122 (427)
T KOG1411|consen 53 KKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSL-----DK-EYLPITGLAEFNKLSAKL---ALGDNSPVIKEKRI-V 122 (427)
T ss_pred ceeeecccceecCCCCeeeeHHHHHHHHHHhhhcc-----cc-hhccccchHHHHHHHHHH---hhcCCchhhhccce-e
Confidence 34777654 34567899998887655221 11 133334555665444332 456532 111 4
Q ss_pred eEEeCCcHHH--HHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhh
Q 010058 145 NVQSLSGSPA--NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAA 222 (519)
Q Consensus 145 ~V~~~sGs~a--~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~ 222 (519)
.+|..||+-| .-+-+.+..-|+..|.+++++.+.|.. ....+|...+...| .|+.+..+|++.+.+.+.
T Consensus 123 tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~~~yrY-yd~~t~gld~~g~ledl~ 193 (427)
T KOG1411|consen 123 TVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPVKFYRY-YDPKTRGLDFKGMLEDLG 193 (427)
T ss_pred EEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc--------cccccCcceeeeee-ccccccccchHHHHHHHh
Confidence 6888898873 444556666789999999999888754 33445666666655 366788999998777776
Q ss_pred hhCCcEEEE---cccc-cc---ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC-------CCCe-EEEEcCC
Q 010058 223 LFRPKLIVA---GASA-YA---RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF-------EYAD-VVTTTTH 287 (519)
Q Consensus 223 ~~k~klIi~---~~sn-~g---~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~-------~~~d-i~~~S~~ 287 (519)
+.-..-+++ |.+| +| ....+++|.++.++.+.+-+.|+|+ -|+-..++..... .+.+ +++-|..
T Consensus 194 ~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAY-QGfaSG~~d~DA~avR~F~~~g~~~~laQSyA 272 (427)
T KOG1411|consen 194 EAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAY-QGFASGDLDKDAQAVRLFVEDGHEILLAQSYA 272 (427)
T ss_pred cCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhh-cccccCCchhhHHHHHHHHHcCCceEeehhhh
Confidence 533333333 3555 65 4455889999999999999999984 3333322221110 0233 5566888
Q ss_pred Ccc--cCCCcce--EEeecccccccccCcchhhhHHHHhh----hcccCCCCCCccHHHHHHHHHH-----HHHhcCHhH
Q 010058 288 KSL--RGPRGAM--IFFRKGVKEINKQGQEVMYAYEDKIN----QAVFPGLQGGPHNHTISGLAVA-----LKQVKTPEY 354 (519)
Q Consensus 288 K~l--~GprgG~--i~~~~~~~~~~~~g~~~~~~~~~~i~----~~~~~~~~g~~~~~~iaal~~a-----l~~~~~~~~ 354 (519)
|.| .|-|.|. |+|++. +...++. ..+.| +.++|+.|..--.+.- +..--..+.
T Consensus 273 KNMGLYgERvGa~svvc~~a-------------d~A~rV~SQlk~liRp-mYSnPP~hGArIv~~Il~d~~l~~~W~~ev 338 (427)
T KOG1411|consen 273 KNMGLYGERVGALSVVCKDA-------------DEAKRVESQLKILIRP-MYSNPPLHGARIVATILSDPDLKNQWLGEV 338 (427)
T ss_pred hhcchhhhccceeEEEecCH-------------HHHHHHHHHHHHHhcc-cccCCCccchhhhhhccCChHHHHHHHHHH
Confidence 976 4667664 355553 3333322 22223 3345554432211111 111111235
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEec
Q 010058 355 KAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG 434 (519)
Q Consensus 355 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~ 434 (519)
+.+..++...++.|.+.|...|-...-..--.....+.+ .|++.+++..+-.+..|...+ -=|||
T Consensus 339 k~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~f--Tgl~peQv~~l~ke~~iYmT~-------------dGRiS 403 (427)
T KOG1411|consen 339 KGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCF--TGLNPEQVDWLTKEYHIYLTK-------------DGRIS 403 (427)
T ss_pred HHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeee--cCCCHHHHHHHHhhheeeecc-------------CceEe
Confidence 667788888899999998887633210000011223333 267888998888899999852 14788
Q ss_pred cCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 435 TPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 435 ~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
....++ ..+.+++++|.++.+
T Consensus 404 ~aG~ss-----~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 404 MAGLSS-----SNVPYLADAIHAVTK 424 (427)
T ss_pred eccccc-----cCCcccchhhHhHhc
Confidence 777776 788999999987764
No 386
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.73 E-value=4.5e-06 Score=82.52 Aligned_cols=252 Identities=19% Similarity=0.179 Sum_probs=127.9
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcC---
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLK--- 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~--- 164 (519)
..|+|.+++..-+.. . +....-+|. .+ .-. +.+.+.+..+-...+ -..+..|||.||..++....+
T Consensus 73 anpev~ral~~q~~k-~--~hs~~~~~t-~e-av~----l~~~l~~~~~~~~~~--rvff~nsGTeAne~ALK~Ark~~~ 141 (433)
T KOG1401|consen 73 ANPEVARALAEQAKK-L--GHSSNGYFT-LE-AVE----LEEVLSAVLGKGSAE--RVFFCNSGTEANETALKFARKFTG 141 (433)
T ss_pred CCHHHHHHHHHHHhh-h--eeccCcccc-HH-HHH----HHHHHHhcccCCCcc--EEEEecCCcHHHHHHHHHHHHhhc
Confidence 478888888876543 2 221111111 11 112 235555555322111 125567888899877665322
Q ss_pred ---CCC--EEEEecCCCccc-ccccccccCCceeeeeeeeEEEeeeeCCC--C-CCCCHHHHHHHhhhhC--CcEEEEcc
Q 010058 165 ---PHE--RIMALDLPHGGH-LSHGYQTDTKKISAVSIFFETMPYRLDES--T-GYIDYEQLEKSAALFR--PKLIVAGA 233 (519)
Q Consensus 165 ---pGD--~Vl~~~~~~~~~-~~~~~~~~~~~v~~~g~~~~~v~~~~d~~--~-~~iD~d~l~~~i~~~k--~klIi~~~ 233 (519)
|-+ +++.+.-.+-|+ +.....+ ..+-.+..+.. .-|+ + ..-|..++++.+..++ ..+||+.|
T Consensus 142 ~~~~~~~t~~Iaf~nsyHG~tlgals~~---~~s~y~~~~~p----~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEP 214 (433)
T KOG1401|consen 142 KKHPEKKTKFIAFENSYHGRTLGALSVT---GNSKYGLPFDP----IAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEP 214 (433)
T ss_pred ccCCccceeEEEEecCcCCcchhHHHhh---cccccCCCCCC----CCCceeecccCCHHHHHHHHHhCCCceEEEEEec
Confidence 223 377765443222 2111100 00111111100 0111 1 1336899999998865 45677764
Q ss_pred cc-cccccc-----HHHHHHHHhhcCCEEEehhhhhhhccccCC--CCCCCC-CCeEEEEcCCCcccC-CCcceEEeecc
Q 010058 234 SA-YARLYD-----YARIRKVCDKQKAVMLADMAHISGLVAAGV--IPSPFE-YADVVTTTTHKSLRG-PRGAMIFFRKG 303 (519)
Q Consensus 234 sn-~g~~~d-----~~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~p~~-~~di~~~S~~K~l~G-prgG~i~~~~~ 303 (519)
-. -|..+| +..|+.+|+++|+++|.|+.+. |+...+. ...-++ ..|+.|.. |.|+| ...|...+++
T Consensus 215 iqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t-G~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~- 290 (433)
T KOG1401|consen 215 IQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT-GLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRD- 290 (433)
T ss_pred ccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh-CccccchHHHHHHhCcCCcceeeh--hhccCCceeEEEeehH-
Confidence 33 343332 5688999999999999999865 3221111 000000 34888877 88854 4448888887
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCC---CccHHHHHHHHHHHHHhcCHhH-HHHHHHHHHHHHHHHHHHHhc
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQG---GPHNHTISGLAVALKQVKTPEY-KAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g---~~~~~~iaal~~al~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~ 375 (519)
++...++.... ..+| +-+.....+...+++.+.++++ ++..++-...++.+.+.+.+.
T Consensus 291 -------------kV~~~i~~~~~-l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~ 352 (433)
T KOG1401|consen 291 -------------KVAEMISPGDH-LYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKT 352 (433)
T ss_pred -------------HHHhhcCCCCc-cccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 55555543322 1111 1123333344557777777765 444444455555555555543
No 387
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.61 E-value=1.6e-06 Score=87.86 Aligned_cols=255 Identities=13% Similarity=0.080 Sum_probs=121.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc----
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL---- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all---- 163 (519)
-.|.+.+++.+.+...- ..++ .. ...+.. ....+++.+.++-..+. -....||+.|+..++....
T Consensus 33 ~~p~i~~ai~~~~~~~~-~~~~-~~--~~~~~~----~~la~~L~~~~p~~~~~---v~f~~sGseAve~Alkla~~~~~ 101 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKLN-YVSF-SG--FTHPEA----AELAEKLAELFPGGLDR---VFFANSGSEAVEAALKLARQYHN 101 (339)
T ss_dssp T-HHHHHHHHHHHHHCS-SCST-TT--SEEHHH----HHHHHHHHHHSSTTEEE---EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CccccchhHHHHhhhcc-cccc-cc--eeccch----hhhhhhhhhccccccce---eeeccCchHHHHHHHHHhhcccc
Confidence 36889999988776521 0110 11 111222 22337777888332221 2555677778887766544
Q ss_pred ----CCCCEEEEecCCCccccc-ccccccC----CceeeeeeeeEEEeeeeCCCC---CCCCHHHHHHHh---hhhCCcE
Q 010058 164 ----KPHERIMALDLPHGGHLS-HGYQTDT----KKISAVSIFFETMPYRLDEST---GYIDYEQLEKSA---ALFRPKL 228 (519)
Q Consensus 164 ----~pGD~Vl~~~~~~~~~~~-~~~~~~~----~~v~~~g~~~~~v~~~~d~~~---~~iD~d~l~~~i---~~~k~kl 228 (519)
....+|+.....+-|... ....... ....-....+..+|++.. .. ..-..+.+++.+ ...+..+
T Consensus 102 ~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~iaa 180 (339)
T PF00202_consen 102 KRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDP-AADEEEQACLNALEELIAALNADEIAA 180 (339)
T ss_dssp HTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCH-HHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred cccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCcc-chhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 244678887655433221 0000000 000000011223333210 00 000111233222 2235567
Q ss_pred EEEcccc--ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCCcccCC-CcceE
Q 010058 229 IVAGASA--YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSLRGP-RGAMI 298 (519)
Q Consensus 229 Ii~~~sn--~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K~l~Gp-rgG~i 298 (519)
|++.|-. .|. ..-+++|+++|++||+++|+|+.+. |+-..|..- .-++ ..|+++++ |+|+|. ..|.+
T Consensus 181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-G~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav 257 (339)
T PF00202_consen 181 VIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQT-GFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAV 257 (339)
T ss_dssp EEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTT-TTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEE
T ss_pred EEEeccccccCccccccchhhehcccccccccceecccccc-cccccCCccceecccccCcccccc--cchhhhhhcccc
Confidence 7777433 332 2237999999999999999999865 221111100 0000 35999998 998654 33788
Q ss_pred EeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 299 FFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
++++ ++.+.+........+++ +....++..+.|+.+.+.+ +.+++.+..++|.+.|+++
T Consensus 258 ~~~~--------------~i~~~~~~~~~~~T~~g-~p~~~aaa~~~l~~~~~~~---~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 258 LGSE--------------EIMEAFQPGSHGSTFGG-NPLSCAAALATLEILEEED---LLERVRELGERLREGLREL 316 (339)
T ss_dssp EEEH--------------HHHTTSCTTSSTCTTTT--HHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHH
T ss_pred cccc--------------hhhcccccccccccccc-chHhhhhhhhHHHhhccHH---HHHHHHHHHHHHHHHHHHH
Confidence 8887 55554322222222222 3333444444566554433 4455666666666666543
No 388
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.50 E-value=4.6e-06 Score=79.32 Aligned_cols=272 Identities=16% Similarity=0.170 Sum_probs=151.4
Q ss_pred eEEeCCcHHHHHHH---HHhhcCCCCEEEEecCCCcccccccccccCCceeeee-eeeEEEeeeeCCCCCCCCHHHHHHH
Q 010058 145 NVQSLSGSPANFQV---YTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS-IFFETMPYRLDESTGYIDYEQLEKS 220 (519)
Q Consensus 145 ~V~~~sGs~a~~~~---~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g-~~~~~v~~~~d~~~~~iD~d~l~~~ 220 (519)
.||..||+.|+... +..++ +...|.+.+++...|..-.. -.| ..+...+| .|.++..+|++.+...
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~-~~~~VY~SnPTW~nH~~if~--------~aGf~tv~~Y~y-Wd~~~k~~d~e~~Lsd 171 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFY-NKNTVYVSNPTWENHHAIFE--------KAGFTTVATYPY-WDAENKCVDLEGFLSD 171 (410)
T ss_pred ceeeccccchhhhhHHHHHHhc-ccceeEecCCchhHHHHHHH--------HcCCceeeeeee-ecCCCceecHHHHHHH
Confidence 48888998766632 22223 45668888988888754332 122 11223333 4556778999999888
Q ss_pred hhhhCCcEEEE-c--ccc-cc---ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC--C----C-CC-eEEEEc
Q 010058 221 AALFRPKLIVA-G--ASA-YA---RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP--F----E-YA-DVVTTT 285 (519)
Q Consensus 221 i~~~k~klIi~-~--~sn-~g---~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p--~----~-~~-di~~~S 285 (519)
++....+.|++ . .+| +| ...-+..|++..++.+.+.+.|.|+ -|+-..+..... + + +. -+++-|
T Consensus 172 l~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAY-QGfASGD~~~DawAiR~fV~~g~e~fv~QS 250 (410)
T KOG1412|consen 172 LESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAY-QGFASGDLDADAWAIRYFVEQGFELFVCQS 250 (410)
T ss_pred HhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhh-cccccCCccccHHHHHHHHhcCCeEEEEhh
Confidence 87633343333 2 445 55 3344788889889999999999883 344333322111 0 0 22 366778
Q ss_pred CCCcc--cCCCcceE--EeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHH--HHHHH----HHHHHhcCHhHH
Q 010058 286 THKSL--RGPRGAMI--FFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHT--ISGLA----VALKQVKTPEYK 355 (519)
Q Consensus 286 ~~K~l--~GprgG~i--~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~--iaal~----~al~~~~~~~~~ 355 (519)
+.|.+ .+.|.|-+ +.++... +. .+..++... .....+.|+..+ |.+.. .-.++.. ..++
T Consensus 251 FaKNfGlYneRvGnltvv~~n~a~---i~------~v~SQl~lv-iR~~~SNPPAyGArIV~kvL~tP~lre~W~-~sik 319 (410)
T KOG1412|consen 251 FAKNFGLYNERVGNLTVVVNNPAV---IA------GVKSQLTLV-IRSNWSNPPAYGARIVHKVLSTPELREQWI-QSIK 319 (410)
T ss_pred hhhhcccccccccceEEEecChhH---HH------HHHHHHHHH-HhhccCCCcchhhHHHHHHhcCHHHHHHHH-HHHH
Confidence 88864 68888733 2333210 00 011111000 011112222211 11111 1111111 1245
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCEEecCCCCcce----eeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeE
Q 010058 356 AYQEQVLSNSSKFARSLLERGYDLVSGGTENHL----VLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431 (519)
Q Consensus 356 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~i 431 (519)
.+..++.+.|..|++.|..++ +||+-.|+ .++. ..|+++.++..+.+.+.|.+.. .+
T Consensus 320 ~MssRI~~MR~aLrd~L~aL~----TPGtWDHI~~QiGMFS--yTGLtp~qV~~li~~h~vyLl~-----------~G-- 380 (410)
T KOG1412|consen 320 TMSSRIKKMRTALRDHLVALK----TPGTWDHITQQIGMFS--YTGLTPAQVDHLIENHKVYLLS-----------DG-- 380 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CCCcHHHHHhhcccee--ecCCCHHHHHHHHHhceEEEec-----------CC--
Confidence 556677777777777777764 44553333 2333 3378888888888889998841 12
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
||+...+++ ..++.++.+|++.++..
T Consensus 381 RInisGLN~-----~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 381 RINISGLNM-----KNVEYVAKAIDETVRAI 406 (410)
T ss_pred cEeeecccc-----ccHHHHHHHHHHHHHhh
Confidence 455444554 88999999999999753
No 389
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.43 E-value=4.9e-05 Score=72.11 Aligned_cols=339 Identities=17% Similarity=0.183 Sum_probs=176.1
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~ 156 (519)
+.|+-.+--.-..|.|.+|...-+.-.. ...|+ ..+++-+-++...+.+=+++ +..++.||+.||.
T Consensus 51 DCInNVaHvghchp~VV~A~~kQmat~~----tN~RF-----lhd~lv~cA~~l~stlPeLs-----vc~F~NSGSEAND 116 (452)
T KOG1403|consen 51 DCINNVAHVGHCHPEVVRAGAKQMATIS----TNNRF-----LHDELVQCARTLTSTLPELS-----VCFFVNSGSEAND 116 (452)
T ss_pred HHhhhhhhcccCCHHHHHHHHHHHhHhc----ccchh-----hHHHHHHHHHHHhhcCCCce-----EEEEecCCchhhH
Confidence 3344444444567888888776554311 11122 13566655555555555544 4578889999988
Q ss_pred HHHHhh--cCCCCEEEEecCCCccccccccc------ccCCceeeeeeeeEEEeeee------------CCCCCCCCHHH
Q 010058 157 QVYTAL--LKPHERIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRL------------DESTGYIDYEQ 216 (519)
Q Consensus 157 ~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~------~~~~~v~~~g~~~~~v~~~~------------d~~~~~iD~d~ 216 (519)
.+++-. .....-|++++..+-||++...- .....+.- --+++.-|.+- +.+-+..--|.
T Consensus 117 LALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~k-pd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~ 195 (452)
T KOG1403|consen 117 LALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAK-PDYVHVAPCPDVYRGKFRDKMYPDADMGALYADP 195 (452)
T ss_pred HHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCC-CceeEecCCccccccccccccCCcccchhhhhhH
Confidence 766643 34555567777777777653321 11111100 01112222210 00001111244
Q ss_pred HHHHhhhh--CC---cEEEEc--ccccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC----CCeE
Q 010058 217 LEKSAALF--RP---KLIVAG--ASAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE----YADV 281 (519)
Q Consensus 217 l~~~i~~~--k~---klIi~~--~sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~----~~di 281 (519)
+++.+.+. +- .+.+.. .|.-|.++| ++.+.+..+.+|-+.|.|+.|. |.-..|.+-+.+. -.||
T Consensus 196 vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fiPDI 274 (452)
T KOG1403|consen 196 VKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFIPDI 274 (452)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhccccch
Confidence 55544331 11 111221 233344444 6788888889999999999864 3333333333332 2588
Q ss_pred EEEcCCCcc-cCCCcceEEeecccccccccCcchhhhHHHHhhh---cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 282 VTTTTHKSL-RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ---AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 282 ~~~S~~K~l-~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~---~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
++.. |.| .|.+.+.+.+.+ ++.+.+.. .+|.. .|+.+.....+++ -++.... +++
T Consensus 275 Vtmg--KpmGNGhPVa~Vattk--------------eIA~Af~atgv~YFNT-yGGnPVsCAv~la-Vm~v~e~---E~L 333 (452)
T KOG1403|consen 275 VTMG--KPMGNGHPVAAVATTK--------------EIAQAFHATGVEYFNT-YGGNPVSCAVGLA-VMRVCED---ENL 333 (452)
T ss_pred heec--ccCCCCCeeeEEeccH--------------HHHHHhccccceehhc-cCCCchhHHHHHH-HHHHHhh---hhH
Confidence 8876 766 455567777777 56665443 23333 3444444444433 2344333 344
Q ss_pred HHHHHHHHHHHHHHHHhc--CCEEecCCCCcce-eeeeccCC----CCcHH---HHHHhhcc-cCeEEcccccCCCCCCC
Q 010058 358 QEQVLSNSSKFARSLLER--GYDLVSGGTENHL-VLVNLRNK----GIDGS---RVEKVLES-VHIAANKNTVPGDVSAM 426 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~-~~v~~~~~----~~~~~---~~~~~L~~-~gI~v~~~~~p~~~~~~ 426 (519)
+++....-++|...|++. ..+++.+-..-.+ .-+++... ..+.+ .+...|++ ++|.++. .| |
T Consensus 334 q~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsa---DG---P- 406 (452)
T KOG1403|consen 334 QEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSA---DG---P- 406 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEec---CC---C-
Confidence 455555555565556554 3455554222222 23444221 11112 23445554 7899862 11 1
Q ss_pred CCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHh
Q 010058 427 VPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLAL 463 (519)
Q Consensus 427 ~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~ 463 (519)
..+.+.|-++..-+ +++.++++..|++++..+.
T Consensus 407 h~NilKiKPPmCFn----eena~e~v~~ld~iLT~me 439 (452)
T KOG1403|consen 407 HRNILKIKPPMCFN----EENADEFVLGLDEILTVME 439 (452)
T ss_pred CCceeecCCCcccC----hhhHHHHHHHHHHHHHHHH
Confidence 24568887776666 8999999999999998653
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.13 E-value=7.1e-05 Score=73.04 Aligned_cols=183 Identities=14% Similarity=0.145 Sum_probs=95.7
Q ss_pred HHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCc--ccCCCcceEEeecccccccccCcchhhhHHHHhhhc
Q 010058 248 VCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKS--LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA 325 (519)
Q Consensus 248 ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~--l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~ 325 (519)
+++.-+..+|.|-|++-...-.=-.+. +-|++.||.+|. -+|-|-||.+++++ ++.+++...
T Consensus 157 V~~g~~~k~I~D~AYYWPhyTpI~~~a---D~DiMLFT~SK~TGHAGSR~GWAlVKD~-------------~Va~kM~~y 220 (363)
T PF04864_consen 157 VLNGSSGKVIHDLAYYWPHYTPITAPA---DHDIMLFTLSKLTGHAGSRFGWALVKDE-------------EVAKKMTKY 220 (363)
T ss_dssp SSTTTEEEEEEE-TT-STTTS---S-B-----SEEEEEHHHHCS-GGG-EEEEEES-H-------------HHHHHHHHH
T ss_pred hcCCCCcceeeeeeeecccccccCCCC---CCceEEEEEecccCccccccceeeecCH-------------HHHHHHHHH
Confidence 345556778999986543321101111 568999999994 24556699999996 555555443
Q ss_pred ccCCCCCCccHHHHHHHH---HHHHHhcCH----hH-HHHHHHHHHHHHHHHHHHHhcC-CEEec--CC----------C
Q 010058 326 VFPGLQGGPHNHTISGLA---VALKQVKTP----EY-KAYQEQVLSNSSKFARSLLERG-YDLVS--GG----------T 384 (519)
Q Consensus 326 ~~~~~~g~~~~~~iaal~---~al~~~~~~----~~-~~~~~~~~~~~~~l~~~L~~~g-~~~~~--~~----------~ 384 (519)
+.-...|...-.++-++. +.++..... .+ +--.+..+++-+.|.+.+...+ |.+.. ++ +
T Consensus 221 ~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~p 300 (363)
T PF04864_consen 221 MELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREP 300 (363)
T ss_dssp HHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE-
T ss_pred HHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCC
Confidence 332233544444444332 111111111 12 3233444555566666665542 33221 10 1
Q ss_pred CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 385 ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 385 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
..-+.|+.+...+ ..++...|++.||..+.+..-| ..+.++|||.. .+ ++|++.+++.|..+
T Consensus 301 sPafAWlkCe~ee--d~DC~~~l~~~~I~tr~G~~fg----a~~ryVRlSml--~~----~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 301 SPAFAWLKCEREE--DEDCYAVLREAKIITRSGVLFG----ADSRYVRLSML--KR----DDDFDQLLERLSKL 362 (363)
T ss_dssp --SEEEEEESSCG--GSSHHHHHHCTTEEEEEGGGGT----S-TTEEEEESS--S-----HHHHHHHHHHHHCC
T ss_pred CCCeEEEecCCcc--cccHHHHHHhCCcccCCCCccC----CCCCeEEEecc--CC----HHHHHHHHHHHHhh
Confidence 1235677665332 3468888999999998433222 24679999964 34 79999999988753
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.08 E-value=9.6e-05 Score=71.73 Aligned_cols=207 Identities=14% Similarity=0.216 Sum_probs=121.4
Q ss_pred HHHHHHHhhhhC----C-cEEEEcc------ccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC---CCCCC-C
Q 010058 214 YEQLEKSAALFR----P-KLIVAGA------SAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI---PSPFE-Y 278 (519)
Q Consensus 214 ~d~l~~~i~~~k----~-klIi~~~------sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~---~~p~~-~ 278 (519)
+++++++|.+++ | .+||+.| .|++...-+..+++|+++||+.+|+|+.|..|..-..+- .+.++ -
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 577888887643 3 3455542 234456668999999999999999999987654332210 01111 3
Q ss_pred CeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHH
Q 010058 279 ADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQ 358 (519)
Q Consensus 279 ~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~ 358 (519)
.|++|+| |-|. .||+.. .++++.. +- ...|....|-|.-..+.. ..++.+.+ +.+.
T Consensus 335 pD~vTFS--KK~q--~gGffh-~~~frpn---------~p-----YrifNTWmGdP~k~lll~--~vv~~I~~---~~Ll 390 (484)
T KOG1405|consen 335 PDVVTFS--KKFQ--TGGFFH-DEEFRPN---------EP-----YRIFNTWMGDPSKNLLLE--EVVQEIKR---EDLL 390 (484)
T ss_pred ccceehh--hhhh--cCcccc-CcccCCC---------ch-----HHHhhhhcCChHHHHHHH--HHHHHHhH---HHHH
Confidence 6999998 5442 245322 2211100 01 112444446666555543 33444443 4566
Q ss_pred HHHHHHHHHHHHHHHhcC------CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEE
Q 010058 359 EQVLSNSSKFARSLLERG------YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432 (519)
Q Consensus 359 ~~~~~~~~~l~~~L~~~g------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 432 (519)
+++...-+.|..+|.++- +.-+. |. ..+.-||+.. +--.+.+...+...|+.+..| +...||
T Consensus 391 ~n~~~vG~~l~~gL~~Lq~~~p~~~~~~R-Gr-GTF~a~d~ps-~~~Rdk~i~~~~~nGv~~GGC---------g~~siR 458 (484)
T KOG1405|consen 391 NNVAHVGKALLKGLLELQAKYPGKINNLR-GR-GTFIAWDCPS-GSIRDKLILIARLNGVNLGGC---------GDKSIR 458 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhccc-cc-ceEEEEeCCC-hHHHHHHHHHHHHcCceeccc---------ccceee
Confidence 777777788888776651 11111 22 2355677654 223456777777889988421 234589
Q ss_pred eccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+-....-+ +...+.+.+.+.+++.
T Consensus 459 fRPsLvf~----~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 459 FRPSLVFR----KHHADIFLDIFDKILA 482 (484)
T ss_pred eccceeeh----hhhHHHHHHHHHHHhc
Confidence 87765555 7888899999988875
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.92 E-value=0.00038 Score=72.58 Aligned_cols=283 Identities=15% Similarity=0.166 Sum_probs=160.7
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC
Q 010058 128 QKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD 206 (519)
Q Consensus 128 ~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d 206 (519)
+..++++.|++.+. + -+.--|+.|-.++.++. ..++.+.++....|+-.++-.. .+..+...+ +
T Consensus 169 QTmi~dlTGL~~aN--A-SLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~------TRa~~~~i~-----v- 233 (1001)
T KOG2040|consen 169 QTMITDLTGLPMAN--A-SLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVK------TRAKGFGIK-----V- 233 (1001)
T ss_pred HHhhhhccCCcccc--h-hhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhh------cccccccee-----E-
Confidence 45667778887542 1 33445666555544444 6677778877766665554221 111111111 1
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CCeEEEE
Q 010058 207 ESTGYIDYEQLEKSAALFRPKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YADVVTT 284 (519)
Q Consensus 207 ~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~ 284 (519)
...|+++.....+ +...|++.+++ .|.+.|+.++.+.+++.|..+++- ..+.+.-+...|-+ ++||+++
T Consensus 234 ---~~~~~~~~~~s~~--~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~a----tDLLaLtiLrpPgefGaDIavG 304 (1001)
T KOG2040|consen 234 ---VVSDIKEADYSSK--DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMA----TDLLALTILRPPGEFGADIAVG 304 (1001)
T ss_pred ---EecCHHHhhcccc--ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEe----ehhhHHHccCChhhcCceeeec
Confidence 1123333222221 45566676555 799999999999999998876652 22333333233333 7999999
Q ss_pred cCCC-----cccCCCcceEEeeccc-cccc--ccCcc------hhhhH-----HHHhhhcccCCCCCCccHHH----HHH
Q 010058 285 TTHK-----SLRGPRGAMIFFRKGV-KEIN--KQGQE------VMYAY-----EDKINQAVFPGLQGGPHNHT----ISG 341 (519)
Q Consensus 285 S~~K-----~l~GprgG~i~~~~~~-~~~~--~~g~~------~~~~~-----~~~i~~~~~~~~~g~~~~~~----iaa 341 (519)
|++. .++||..||..+++++ +..| +.|-+ ..|.+ ++.|++-. .+.+.-. +|-
T Consensus 305 SsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDK-----ATSNICTAQALLAN 379 (1001)
T KOG2040|consen 305 SSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDK-----ATSNICTAQALLAN 379 (1001)
T ss_pred cccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhc-----cchhhhHHHHHHHH
Confidence 9886 2467777888888764 3334 23322 11111 11222111 1222111 111
Q ss_pred HHHHHH-HhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccC
Q 010058 342 LAVALK-QVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVP 420 (519)
Q Consensus 342 l~~al~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p 420 (519)
+++-.. +....+++++.+++....-.|..+|+..|.+++.. .++-.+.+.. +-+.+++.+...+.+|.++.
T Consensus 380 maAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k---~fFDTLkI~~-~~s~~~~l~rA~~~~iNlr~---- 451 (1001)
T KOG2040|consen 380 MAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQHK---PFFDTLKIRC-GCSAEEVLDRAAKRQINLRL---- 451 (1001)
T ss_pred HHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhccc---cccceEEEEe-cCcHHHHHHHHHhhcCceEE----
Confidence 111111 23456789999999999999999999988766532 2333333332 22566666666667777762
Q ss_pred CCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 421 GDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 421 ~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
...+.|-+++...++ ++|++.+...+.
T Consensus 452 -----~ed~tigvslDETv~----~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 452 -----VEDGTIGVSLDETVT----EKDVDDLLWVFN 478 (1001)
T ss_pred -----eecCceEEeeccccc----HHHHHHHHHHHc
Confidence 123457777776666 899999998886
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.65 E-value=0.00015 Score=64.16 Aligned_cols=61 Identities=8% Similarity=-0.040 Sum_probs=48.5
Q ss_pred CCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCc
Q 010058 115 GGNEYIDMAESLCQKRALDAFQ--LDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHG 177 (519)
Q Consensus 115 ~~~~~~~~le~~~~~~~~~~~g--~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~ 177 (519)
+...+..++++++.+++.+.+| +..+. .+|++++|++ ++..+++++++|||.|+++++.++
T Consensus 89 ~~~~G~~~lR~AiA~~l~~~~g~~v~~~p--d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 89 QDYHGLANFRKAIANFMAEARGGRVKFDA--DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred CCCCCcHHHHHHHHHHHHHHhCCCCccch--hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 3445567888999999999988 33221 3699999998 888899999999999999996554
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.63 E-value=0.0016 Score=61.65 Aligned_cols=340 Identities=16% Similarity=0.142 Sum_probs=172.5
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCC----CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC--
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYP----GARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS-- 150 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p----~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s-- 150 (519)
..+++.|++.-+|.+|+..+++.+-|--.-|-. ++| +.++ ..+-+.+...+.+++++.... .|++.-
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHR---sk~f-~kii~~tes~lreLlniPdn~---~vlf~QGG 79 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHR---SKDF-AKIINDTESLLRELLNIPDNY---KVLFLQGG 79 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEeccc---chhH-HHHHHHHHHHHHHHHcCCCce---eEEEEeCC
Confidence 458899999999999999999888772211211 111 1122 334455668888999986432 355543
Q ss_pred cHHHHHHHHHhh--cCCCC---EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCC--CCCCHHHHHHHhhh
Q 010058 151 GSPANFQVYTAL--LKPHE---RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDEST--GYIDYEQLEKSAAL 223 (519)
Q Consensus 151 Gs~a~~~~~~al--l~pGD---~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~--~~iD~d~l~~~i~~ 223 (519)
|+.-.-++...| ++.|+ -|++-. .+. ..+. ...-.|. +..|..+..+-+ -..|.+.++.. .
T Consensus 80 Gt~qFaAv~lNL~glK~g~~AdYiVTGs------WS~--KA~~-EAkk~~~-~~~V~~~~k~y~ygkvPd~~~w~~~--~ 147 (370)
T KOG2790|consen 80 GTGQFAAVPLNLIGLKHGRCADYVVTGS------WSA--KAAE-EAKKYGT-PNIVIPKLKSYTYGKVPDPSTWELN--P 147 (370)
T ss_pred CcccccccchhhhccccCCccceEEecc------ccH--HHHH-HHHhhCC-ceEEeccccccccCcCCChhhcccC--C
Confidence 333222333444 35553 343211 110 0000 0000011 111111111111 22344444321 1
Q ss_pred hCCcEEEEcccc--ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEe
Q 010058 224 FRPKLIVAGASA--YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFF 300 (519)
Q Consensus 224 ~k~klIi~~~sn--~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~ 300 (519)
+.+.+..|.+. .|..+|.-- +-.-+|+++++|+..-+-.-+.++. ..+++....+|.+ ||-| -+++.
T Consensus 148 -da~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpvDvs-----k~gvi~aGAQKN~-G~aG~Tvviv 217 (370)
T KOG2790|consen 148 -DASYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPVDVS-----KFGVIFAGAQKNV-GPAGVTVVIV 217 (370)
T ss_pred -CccEEEEecCceeeceecCCCC---CCCCCCceEEEecccchhcCCccch-----hcceEEecccccc-CccccEEEEE
Confidence 34567776433 464443211 2245689999998732221222222 4578888899986 5555 56667
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
++++.-.+..--...+++.... ....+..||+...+..+...++++.+. +.....+.-.+.++.+++.|.+. ||-
T Consensus 218 r~dllg~~~~~tP~v~dyk~~~---~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy 294 (370)
T KOG2790|consen 218 RKDLLGNALDITPSVLDYKIMD---KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFY 294 (370)
T ss_pred ehhhhcccccCCccccceeeec---cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeE
Confidence 7753110000000001111100 112233567777777777778876554 45777777888999999999887 754
Q ss_pred Eec-CCCC-cce-eeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 379 LVS-GGTE-NHL-VLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 379 ~~~-~~~~-~~~-~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
... .... +.+ +.+.+.+.++..+.+.+..++.=|.+ -|+. .-++||-|.-...+ -++.+++++++
T Consensus 295 ~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~L-----KGhR---SVGGiRASlYNAis----v~~~q~L~~~m 362 (370)
T KOG2790|consen 295 RCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQL-----KGHR---SVGGIRASLYNAIS----VEEVQKLAAFM 362 (370)
T ss_pred EcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhcc-----cccc---ccccchhhhhcccc----HHHHHHHHHHH
Confidence 322 1111 112 22223332333333333333333333 2443 35789998765555 79999999999
Q ss_pred HHHHH
Q 010058 456 DAAVK 460 (519)
Q Consensus 456 ~~~l~ 460 (519)
++..+
T Consensus 363 ~~F~k 367 (370)
T KOG2790|consen 363 KEFQK 367 (370)
T ss_pred HHHHH
Confidence 88764
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.14 E-value=0.015 Score=54.67 Aligned_cols=164 Identities=17% Similarity=0.221 Sum_probs=95.7
Q ss_pred EEeCCcHHHHHHHHHhh--cCCCCE-EEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhh
Q 010058 146 VQSLSGSPANFQVYTAL--LKPHER-IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAA 222 (519)
Q Consensus 146 V~~~sGs~a~~~~~~al--l~pGD~-Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~ 222 (519)
|-..+|.+..+ ++.++ -+|.-+ |+-+..+.-+.+... .-+|..+..+.--.|.+.-.-|++.+++.+.
T Consensus 81 vpl~tgmslsl-c~~s~r~krpkakyiiw~ridqks~~ksi--------~~agfepiiie~i~d~d~l~tdleav~~~ie 151 (432)
T KOG3843|consen 81 VPLATGMSLSL-CFLSLRHKRPKAKYIIWLRIDQKSCFKSI--------IHAGFEPIIIENILDGDELITDLEAVEAIIE 151 (432)
T ss_pred EeccccccHHH-HHHHHhhcCCcccEEEEEecchHHHHHHH--------HhcCCCceeeeccccchHHHHhHHHHHHHHH
Confidence 33445555433 55565 345444 555555443333211 1224333333322343334568999999999
Q ss_pred hhCCcEEEEcccc---c-c-ccccHHHHHHHHhhcCCEEEehhhhhhh------ccccCCCCCCCCCCeEEEEcCCCccc
Q 010058 223 LFRPKLIVAGASA---Y-A-RLYDYARIRKVCDKQKAVMLADMAHISG------LVAAGVIPSPFEYADVVTTTTHKSLR 291 (519)
Q Consensus 223 ~~k~klIi~~~sn---~-g-~~~d~~~i~~ia~~~~~~livD~ah~~g------~~~~~~~~~p~~~~di~~~S~~K~l~ 291 (519)
+..+..|.+..+. + | .+..+++|..||..|+++-++..|+..- .+..+. ..+.+|.++-|.-|.+.
T Consensus 152 e~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~---~~grida~vqsldknf~ 228 (432)
T KOG3843|consen 152 ELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAA---ECGRIDAFVQSLDKNFM 228 (432)
T ss_pred HhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHh---hhccHHHHHHHhhhcce
Confidence 8778877665322 3 3 3456999999999999999998774211 111111 11257889999999999
Q ss_pred CCCcceEEee-cccccccccCcchhhhHHHHhhhcccCCCC-CCcc
Q 010058 292 GPRGAMIFFR-KGVKEINKQGQEVMYAYEDKINQAVFPGLQ-GGPH 335 (519)
Q Consensus 292 GprgG~i~~~-~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~-g~~~ 335 (519)
-|-||.|+.. ++ .+++.+.+ .+|+.. ..|.
T Consensus 229 vpvggaiia~fk~-------------n~iq~iak-~ypgrasa~ps 260 (432)
T KOG3843|consen 229 VPVGGAIIAAFKD-------------NFIQEIAK-MYPGRASASPS 260 (432)
T ss_pred eecchhHhhHhHH-------------HHHHHHHH-hCCCccccCcc
Confidence 9988765532 22 45555544 467765 3344
No 396
>PRK09375 quinolinate synthetase; Provisional
Probab=80.35 E-value=9.4 Score=37.97 Aligned_cols=111 Identities=16% Similarity=0.256 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC
Q 010058 61 DPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPA 140 (519)
Q Consensus 61 ~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~ 140 (519)
..++.+.|.+.+ ++++.+ |-..++..++|++ +.....+ .|+ ++ ..+++ .+.
T Consensus 18 ~~~~~~~I~~lk-~e~~a~--ILaH~Yq~~eiq~-~AD~~GD-------------------Sl~-Ls-~~A~~---~~a- 68 (319)
T PRK09375 18 KADLKERIKRLK-KERNAV--ILAHYYQRPEIQD-LADFTGD-------------------SLE-LA-RFAAE---TDA- 68 (319)
T ss_pred hHHHHHHHHHHH-HhcCcE--EEEecCCCHHHHH-HHHhhcc-------------------HHH-HH-HHHHh---CCC-
Confidence 344555555543 334444 4488999999954 3333222 222 22 22222 232
Q ss_pred CCcceEEeCCcHH--HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHH
Q 010058 141 KWGVNVQSLSGSP--ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 141 ~~~~~V~~~sGs~--a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~ 218 (519)
.+++-.|.. |-. ..+|+|+-+|+.+++..|+.+. ..++.++|+
T Consensus 69 ----~~IvfcGV~FMaEt---AkIL~p~k~VllP~~~AgC~mA----------------------------d~~~~~~i~ 113 (319)
T PRK09375 69 ----DTIVFCGVHFMAET---AKILSPEKTVLLPDLEAGCSLA----------------------------DMCPAEEFR 113 (319)
T ss_pred ----CEEEEecceehhhh---HHhcCCCCeEECCCCCCCCccc----------------------------ccCCHHHHH
Confidence 377777876 444 2567899999999855444321 346789999
Q ss_pred HHhhhhCCcEEEEccccc
Q 010058 219 KSAALFRPKLIVAGASAY 236 (519)
Q Consensus 219 ~~i~~~k~klIi~~~sn~ 236 (519)
+..++ .|.++++.+.|+
T Consensus 114 ~lk~~-~p~a~vVaYvNs 130 (319)
T PRK09375 114 AFKEA-HPDATVVTYVNT 130 (319)
T ss_pred HHHHH-CCCCEEEEEeCC
Confidence 87777 788888886663
No 397
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=74.63 E-value=27 Score=36.35 Aligned_cols=156 Identities=15% Similarity=0.127 Sum_probs=80.0
Q ss_pred CCCCHHHHHHHhhhh----CCcEEEEc---cccccccccHHHHHHHHhhcC-CEEEehhhhhhhccccCCCCCCCC----
Q 010058 210 GYIDYEQLEKSAALF----RPKLIVAG---ASAYARLYDYARIRKVCDKQK-AVMLADMAHISGLVAAGVIPSPFE---- 277 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~----k~klIi~~---~sn~g~~~d~~~i~~ia~~~~-~~livD~ah~~g~~~~~~~~~p~~---- 277 (519)
+++|.-.+++.+.+. |+-+|++. .+-.|....+-+|.++|++|+ .|++.-+-..+.++... ..+-+.
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasGhaiAALt~ae-pnnil~HV~e 350 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASGHAIAALTCAE-PNNILGHVEE 350 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeeccchhhheeecC-cccchhHHHH
Confidence 489998888877642 44455444 333788888999999999987 77776543233333221 111111
Q ss_pred CCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 278 YADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 278 ~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
-.|.++....-||+-|..-+++..+++.-.....-.-.--+.++++. ..++.++..+....+.++
T Consensus 351 qldSMal~ialWLGiPSaPiV~LHRPleg~aaSafesdpi~rekLda---------------Lp~Wta~q~LggKaIadm 415 (838)
T KOG0630|consen 351 QLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAFESDPILREKLDA---------------LPLWTALQALGGKAIADM 415 (838)
T ss_pred HHhhccchhHHHhCCCCCceEEeecccccccchhcccChHHHHhhcc---------------chHHHHHHHhcccHHHHH
Confidence 23455555555665554445555543210000000000012233222 123445554444344444
Q ss_pred HHHHHHHHHHHHHHHHhc-CCEEec
Q 010058 358 QEQVLSNSSKFARSLLER-GYDLVS 381 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~-g~~~~~ 381 (519)
.+..-..++.|.+.+.+. ++++++
T Consensus 416 ienAFll~kilfe~aSa~~eiemig 440 (838)
T KOG0630|consen 416 IENAFLLCKILFEGASACEEIEMIG 440 (838)
T ss_pred HHHHHHHHHHHHHHhhcCCceeEec
Confidence 555555666777777666 666654
No 398
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=72.48 E-value=11 Score=34.37 Aligned_cols=71 Identities=14% Similarity=0.181 Sum_probs=46.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 287 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~ 287 (519)
...++++.+.++. ...+|.+..+.-.+..+++++.+-+++...+++.|.+-........ .. ++|++.++.+
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~A~--~~---G~D~I~TTLs 121 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAINAA--EL---GFDIIGTTLS 121 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHHHH--HT---T-SEEE-TTT
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHHHH--Hc---CCCEEEcccc
Confidence 3468889888887 8899999888866668899999888888899999987443222211 11 6899988844
No 399
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=71.79 E-value=39 Score=34.45 Aligned_cols=57 Identities=18% Similarity=0.323 Sum_probs=41.7
Q ss_pred CCC-CCHHHHHHHhhh----hCCcEEEE--cccccc----ccccHHHHHHHHhhcCCEEEehhhhhhh
Q 010058 209 TGY-IDYEQLEKSAAL----FRPKLIVA--GASAYA----RLYDYARIRKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 209 ~~~-iD~d~l~~~i~~----~k~klIi~--~~sn~g----~~~d~~~i~~ia~~~~~~livD~ah~~g 265 (519)
++. .++++++.++.. .+++++++ |.+.|+ ...|+..|..+-+.++++|++|..|..|
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 343 588888776642 35677777 344455 2368999998888899999999999887
No 400
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=69.97 E-value=11 Score=34.56 Aligned_cols=69 Identities=16% Similarity=0.119 Sum_probs=49.0
Q ss_pred CHHHHHHHhhhhCCcEEEEccccccccc-cHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC
Q 010058 213 DYEQLEKSAALFRPKLIVAGASAYARLY-DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 287 (519)
Q Consensus 213 D~d~l~~~i~~~k~klIi~~~sn~g~~~-d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~ 287 (519)
.++++++++.. ...+|.+..+.-.+.. ++++|.+-.|..|.+++.|++..-..... +.. ++|++.++.+
T Consensus 87 tlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l~a--~~~---G~D~IGTTLs 156 (229)
T COG3010 87 TLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGLNA--HKL---GFDIIGTTLS 156 (229)
T ss_pred cHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHHHHHH--HHc---CCcEEecccc
Confidence 46778887776 7778888766655555 89999988888999999998744322221 112 6899987743
No 401
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=65.54 E-value=15 Score=30.13 Aligned_cols=22 Identities=32% Similarity=0.594 Sum_probs=14.1
Q ss_pred EEeCCcHHHHHHHHHhhcCCCCEEEEec
Q 010058 146 VQSLSGSPANFQVYTALLKPHERIMALD 173 (519)
Q Consensus 146 V~~~sGs~a~~~~~~all~pGD~Vl~~~ 173 (519)
++..+|+.|- +.+|||.|+++.
T Consensus 67 ~I~lNGAAAr------~~~~GD~vII~s 88 (111)
T cd06919 67 VICLNGAAAR------LGQPGDRVIIMA 88 (111)
T ss_pred EEEeCCHHHh------cCCCCCEEEEEE
Confidence 5555555433 368888888765
No 402
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=63.59 E-value=18 Score=30.44 Aligned_cols=13 Identities=15% Similarity=0.238 Sum_probs=9.9
Q ss_pred hhCCcEEEEcccc
Q 010058 223 LFRPKLIVAGASA 235 (519)
Q Consensus 223 ~~k~klIi~~~sn 235 (519)
.++|++|+++..|
T Consensus 100 ~~~P~vv~vd~~N 112 (126)
T TIGR00223 100 THRPNVAYFEGDN 112 (126)
T ss_pred cCCCEEEEECCCC
Confidence 3689999888655
No 403
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=62.70 E-value=19 Score=30.37 Aligned_cols=13 Identities=15% Similarity=0.450 Sum_probs=10.0
Q ss_pred hhCCcEEEEcccc
Q 010058 223 LFRPKLIVAGASA 235 (519)
Q Consensus 223 ~~k~klIi~~~sn 235 (519)
.++|++|+++..|
T Consensus 100 ~~~P~vv~vd~~N 112 (126)
T PRK05449 100 THKPKVVFVDEDN 112 (126)
T ss_pred cCCCEEEEECCCC
Confidence 4689999888655
No 404
>COG0379 NadA Quinolinate synthase [Coenzyme metabolism]
Probab=59.93 E-value=57 Score=32.19 Aligned_cols=110 Identities=15% Similarity=0.274 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCC
Q 010058 61 DPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPA 140 (519)
Q Consensus 61 ~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~ 140 (519)
+.+..+.|.+. +++++.+- ...|+..|+|++ +.....+ .|+ +++.. -..+.
T Consensus 20 ~~~l~~~I~~L-k~e~navI--LAH~Yq~peIq~-iAD~vGD-------------------SL~-LAr~A----~~~~A- 70 (324)
T COG0379 20 DADLKEEIKRL-KKERNAVI--LAHNYQRPEIQD-IADFVGD-------------------SLE-LAREA----AKTDA- 70 (324)
T ss_pred hHHHHHHHHHH-HHhcCcEE--EEecCCCHHHHH-HHHhhcc-------------------HHH-HHHHH----hhCCC-
Confidence 34445555544 33444444 488999999988 4443322 232 22211 12232
Q ss_pred CCcceEEeCCcHH--HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHH
Q 010058 141 KWGVNVQSLSGSP--ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 141 ~~~~~V~~~sGs~--a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~ 218 (519)
++++-.|.. |-. ..+|+|..+|+++++..|+.+. ..+|.++++
T Consensus 71 ----d~IVf~GV~FMaET---AkiLnPeK~VL~Pd~~AgCsmA----------------------------~~~~~~~~~ 115 (324)
T COG0379 71 ----DTIVFAGVHFMAET---AKILNPEKTVLLPDLEAGCSMA----------------------------DMITAEEVR 115 (324)
T ss_pred ----CEEEEeceeehHhh---HhhcCCCCeEecCCCCCCCCcc----------------------------cCCCHHHHH
Confidence 477778876 322 3468999999999855444321 346788888
Q ss_pred HHhhhhCCcEEEEcccc
Q 010058 219 KSAALFRPKLIVAGASA 235 (519)
Q Consensus 219 ~~i~~~k~klIi~~~sn 235 (519)
+.-.. -|.+.++.+-|
T Consensus 116 ~~~~~-~P~~~vV~YvN 131 (324)
T COG0379 116 AFKEK-HPDAPVVTYVN 131 (324)
T ss_pred HHHHH-CCCCceEEEee
Confidence 77655 45555555554
No 405
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=56.98 E-value=39 Score=34.57 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=43.3
Q ss_pred eeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh--hCCcEEEEccccccccccHHHHHHHHhhcCCEEEehh
Q 010058 191 ISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL--FRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADM 260 (519)
Q Consensus 191 v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~--~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ 260 (519)
.++....-+.+.++........+...|.+.+.. .+.++++++--+-|...+.+.+.++|++.|+++++|-
T Consensus 107 ~Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 107 LRVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred eeeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHcCCcEEECC
Confidence 334444444444443321122344444444443 2567888864445677789999999999999999993
No 406
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=56.81 E-value=28 Score=29.03 Aligned_cols=14 Identities=21% Similarity=0.477 Sum_probs=10.5
Q ss_pred hhhCCcEEEEcccc
Q 010058 222 ALFRPKLIVAGASA 235 (519)
Q Consensus 222 ~~~k~klIi~~~sn 235 (519)
+.++||+++++..|
T Consensus 98 ~~~~Pkvv~~d~~N 111 (126)
T COG0853 98 KTHKPKVVVVDEKN 111 (126)
T ss_pred hccCCeEEEECCCC
Confidence 45688988888665
No 407
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=56.10 E-value=31 Score=28.26 Aligned_cols=48 Identities=21% Similarity=0.244 Sum_probs=40.9
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEe
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLA 258 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~liv 258 (519)
..+++++++..+.+ +|..|+++.-.+|...-.++..+++++.++-+++
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~ 94 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIE 94 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEE
Confidence 57999999999987 8999999866688887788889999999876665
No 408
>PRK14622 hypothetical protein; Provisional
Probab=54.24 E-value=43 Score=27.37 Aligned_cols=43 Identities=14% Similarity=0.198 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCC
Q 010058 445 EEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFE 511 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~ 511 (519)
++|.+.+-+.|..++..+.+ ..-+...++...++..+|+|||+
T Consensus 60 ~ed~e~LeDLI~aA~N~A~~------------------------k~~~~~~~~m~~~tgg~~lPG~~ 102 (103)
T PRK14622 60 PNDKAMLEDLVTAAVNAAVE------------------------KARTAADESMSKATGGIKIPGIA 102 (103)
T ss_pred cccHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHhCCCCCCCCC
Confidence 57888888888888876531 12235667788899999999986
No 409
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=49.80 E-value=1.3e+02 Score=30.47 Aligned_cols=57 Identities=16% Similarity=0.191 Sum_probs=40.3
Q ss_pred CCCHHHHHHHhhh----hCCcEEEEcc-----c-ccc-ccccHHHHHHHHhhcCCEEEehhhhhhhcc
Q 010058 211 YIDYEQLEKSAAL----FRPKLIVAGA-----S-AYA-RLYDYARIRKVCDKQKAVMLADMAHISGLV 267 (519)
Q Consensus 211 ~iD~d~l~~~i~~----~k~klIi~~~-----s-n~g-~~~d~~~i~~ia~~~~~~livD~ah~~g~~ 267 (519)
..+++++..+++. .+.+++++-- . .|+ ...|+..|..+.+..++.+|+|.+|+.|..
T Consensus 218 ~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 218 AATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKS 285 (352)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcH
Confidence 3477777766542 3556666632 2 355 667899999987777999999999988643
No 410
>COG4566 TtrR Response regulator [Signal transduction mechanisms]
Probab=49.50 E-value=37 Score=30.97 Aligned_cols=53 Identities=19% Similarity=0.201 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhcCCEEecC-----------CCCcceeeeeccCCCCcHHHHHHhhcccCeEEc
Q 010058 363 SNSSKFARSLLERGYDLVSG-----------GTENHLVLVNLRNKGIDGSRVEKVLESVHIAAN 415 (519)
Q Consensus 363 ~~~~~l~~~L~~~g~~~~~~-----------~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~ 415 (519)
..++.+...|...||.+.+- ......+++|++-+|++|.++.+.|.+.|+..-
T Consensus 15 ~vr~al~~Ll~s~G~~v~~~~s~~~fL~~~~~~~pGclllDvrMPg~sGlelq~~L~~~~~~~P 78 (202)
T COG4566 15 SVRDALAFLLESAGFQVKCFASAEEFLAAAPLDRPGCLLLDVRMPGMSGLELQDRLAERGIRLP 78 (202)
T ss_pred HHHHHHHHHHHhCCceeeeecCHHHHHhhccCCCCCeEEEecCCCCCchHHHHHHHHhcCCCCC
Confidence 34566666777778876541 112345678888889999999999999888664
No 411
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=46.67 E-value=45 Score=27.53 Aligned_cols=52 Identities=15% Similarity=0.219 Sum_probs=37.6
Q ss_pred CCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc--CCEEEehhhhh
Q 010058 212 IDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ--KAVMLADMAHI 263 (519)
Q Consensus 212 iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~--~~~livD~ah~ 263 (519)
.+.+++.+.+.+.+|++|.++.+..+......++.+..++. ++.+++=+.|.
T Consensus 38 ~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 38 VPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp B-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 45588888888889999988754555555667777777776 77888776653
No 412
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=46.64 E-value=55 Score=27.10 Aligned_cols=42 Identities=7% Similarity=-0.055 Sum_probs=32.4
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ 252 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~ 252 (519)
.+..+++.+.+.+.+|++|.++.+++....+..++.+.+++.
T Consensus 36 ~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 36 DVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEA 77 (119)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHc
Confidence 356788888888889999999877666666777877777765
No 413
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=45.49 E-value=27 Score=30.71 Aligned_cols=43 Identities=21% Similarity=0.341 Sum_probs=27.3
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcC
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~ 253 (519)
.-|.+.|.+.+.+++|.+|+++..+.....-.+.+.++.++..
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 4567788889999999999997544433344567777776654
No 414
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=43.97 E-value=1.2e+02 Score=29.09 Aligned_cols=56 Identities=16% Similarity=0.306 Sum_probs=39.7
Q ss_pred CCCHHHHHHHhhh----hCCcEEEEc--ccccc---c-cccHHHHHHHHhhcCCEEEehhhhhhhc
Q 010058 211 YIDYEQLEKSAAL----FRPKLIVAG--ASAYA---R-LYDYARIRKVCDKQKAVMLADMAHISGL 266 (519)
Q Consensus 211 ~iD~d~l~~~i~~----~k~klIi~~--~sn~g---~-~~d~~~i~~ia~~~~~~livD~ah~~g~ 266 (519)
..++++++.+++. .+++++++- .+.|+ + ..|+..|..+.+..+..|++|-.|..|.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 5677777765542 356777764 33355 2 6788888888887899999999998663
No 415
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=43.36 E-value=1.8e+02 Score=28.75 Aligned_cols=44 Identities=27% Similarity=0.329 Sum_probs=29.3
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEec
Q 010058 126 LCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALD 173 (519)
Q Consensus 126 ~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~ 173 (519)
+.+++..+++..|. +.|.+.||++ |-+++=.+.+.|+.+|+..+
T Consensus 170 Ei~~Q~~~~~~fD~----vVva~gs~gT~AGl~~g~~~~~~~~~ViG~~ 214 (323)
T COG2515 170 EIAEQAEQLLKFDS----VVVAPGSGGTHAGLLVGLAQLGPDVEVIGID 214 (323)
T ss_pred HHHHHHhhccCCCE----EEEeCCCcchHHHHHHHhhhccCCCceEEEe
Confidence 34466665555554 4455566666 77767777788899998765
No 416
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=42.29 E-value=2.3e+02 Score=29.45 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHcC-CCCCCCcceEEeCCcHHHHHHHHHhhcCCC-CEEEEecCCCcccccccccccCCceeeeeeeeE
Q 010058 122 MAESLCQKRALDAFQ-LDPAKWGVNVQSLSGSPANFQVYTALLKPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 199 (519)
Q Consensus 122 ~le~~~~~~~~~~~g-~~~~~~~~~V~~~sGs~a~~~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 199 (519)
.+...+.+.+.+.|| +.... -++++.|-.+-. +...|...| ..|.+.+-+.-- ...++.
T Consensus 160 Si~saAv~lA~~~~~~L~~~~---vlvIGAGem~~l-va~~L~~~g~~~i~IaNRT~er-----------A~~La~---- 220 (414)
T COG0373 160 SISSAAVELAKRIFGSLKDKK---VLVIGAGEMGEL-VAKHLAEKGVKKITIANRTLER-----------AEELAK---- 220 (414)
T ss_pred chHHHHHHHHHHHhcccccCe---EEEEcccHHHHH-HHHHHHhCCCCEEEEEcCCHHH-----------HHHHHH----
Confidence 345566678888888 45432 266666655544 677777777 667666522100 111110
Q ss_pred EEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 200 TMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 200 ~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
.+ ....+.++++...+.+ ..+||.+.+..-.+.+...+....+...-++++|.+ +|.++.+
T Consensus 221 ----~~--~~~~~~l~el~~~l~~--~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDia-----vPRdie~ 281 (414)
T COG0373 221 ----KL--GAEAVALEELLEALAE--ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIA-----VPRDVEP 281 (414)
T ss_pred ----Hh--CCeeecHHHHHHhhhh--CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEec-----CCCCCCc
Confidence 01 0234567777777764 567766644433445555555554432229999988 5555544
No 417
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=41.44 E-value=1.4e+02 Score=29.51 Aligned_cols=71 Identities=20% Similarity=0.164 Sum_probs=48.8
Q ss_pred EEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh
Q 010058 146 VQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 146 V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~ 224 (519)
|++|.|+- .-...+..|++.|-.|++.|.-..||..... ... .+.+ .+...|-+.|.+.+.++
T Consensus 3 iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~-----~~~-----~~f~------~gDi~D~~~L~~vf~~~ 66 (329)
T COG1087 3 VLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL-----KLQ-----FKFY------EGDLLDRALLTAVFEEN 66 (329)
T ss_pred EEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh-----hcc-----CceE------EeccccHHHHHHHHHhc
Confidence 78888876 5555888899999999999877767654222 100 1111 13456888999999998
Q ss_pred CCcEEEEc
Q 010058 225 RPKLIVAG 232 (519)
Q Consensus 225 k~klIi~~ 232 (519)
++.+|+--
T Consensus 67 ~idaViHF 74 (329)
T COG1087 67 KIDAVVHF 74 (329)
T ss_pred CCCEEEEC
Confidence 99887754
No 418
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=38.31 E-value=87 Score=26.71 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=33.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCC
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKA 254 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~ 254 (519)
....+++-+++.++++.+|.++.-++.....++++.+.+++.|+
T Consensus 36 ~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 36 LSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCC
Confidence 35688888888888999998875556666778888888887653
No 419
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=37.90 E-value=1.1e+02 Score=26.26 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=31.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ 252 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~ 252 (519)
.+.++++.+++.+.+|++|.++..++.....++++.+.+++.
T Consensus 40 ~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 40 MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA 81 (137)
T ss_pred CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc
Confidence 456889988888889999999866655556677777776665
No 420
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=37.87 E-value=72 Score=34.11 Aligned_cols=54 Identities=19% Similarity=0.242 Sum_probs=38.7
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc--CCEEEehhhhhh
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ--KAVMLADMAHIS 264 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~--~~~livD~ah~~ 264 (519)
..++.+++.+.+.+.+|++|.++.. ++......++.+++++. ++.+++=+.|..
T Consensus 48 ~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 48 GPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred cCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 4567788888888778999888622 34444556777777776 888888777653
No 421
>TIGR03586 PseI pseudaminic acid synthase.
Probab=36.36 E-value=1.9e+02 Score=29.12 Aligned_cols=53 Identities=17% Similarity=0.303 Sum_probs=35.2
Q ss_pred CCHHHHHHHhh----hhCCcEEEE-cccccc---ccccHHHHHHHHhhcCCEE-Eehhhhhhhc
Q 010058 212 IDYEQLEKSAA----LFRPKLIVA-GASAYA---RLYDYARIRKVCDKQKAVM-LADMAHISGL 266 (519)
Q Consensus 212 iD~d~l~~~i~----~~k~klIi~-~~sn~g---~~~d~~~i~~ia~~~~~~l-ivD~ah~~g~ 266 (519)
-++++++.++. ..+++++++ |.++|| ...++..|..+.++++..| ++| |..|.
T Consensus 144 ~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~ 205 (327)
T TIGR03586 144 ATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGI 205 (327)
T ss_pred CCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCch
Confidence 35666666543 223455554 366676 4567889999989999888 788 77663
No 422
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=35.87 E-value=16 Score=30.33 Aligned_cols=13 Identities=15% Similarity=0.396 Sum_probs=7.6
Q ss_pred hhCCcEEEEcccc
Q 010058 223 LFRPKLIVAGASA 235 (519)
Q Consensus 223 ~~k~klIi~~~sn 235 (519)
.++|++|+++..|
T Consensus 100 ~~~P~vv~vd~~N 112 (116)
T PF02261_consen 100 NHKPKVVFVDEKN 112 (116)
T ss_dssp H---EEEEEETTS
T ss_pred hCCCEEEEECCCC
Confidence 3699999998655
No 423
>PRK14625 hypothetical protein; Provisional
Probab=35.24 E-value=1.2e+02 Score=25.04 Aligned_cols=44 Identities=20% Similarity=0.081 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCC--CCCCCc
Q 010058 445 EEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFP--TVGFEK 512 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p--~~~~~~ 512 (519)
++|.+.+-+.|..++..+.. ..-+...++...++..+| +|||+.
T Consensus 61 ~eD~e~LeDLI~aA~NdA~~------------------------k~~~~~~~~m~~~tgg~~~~lPG~~~ 106 (109)
T PRK14625 61 PGEGEVIADLIVAAHADAKK------------------------KLDAKQAQLMQEAAGPMAGLMGGLPG 106 (109)
T ss_pred CccHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 57888888888888876532 122356677888999999 898864
No 424
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=34.89 E-value=1.1e+02 Score=25.49 Aligned_cols=48 Identities=19% Similarity=0.106 Sum_probs=36.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEeh
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLAD 259 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD 259 (519)
.++.++++..+.. +|.+|+++.-.++....-.++.+.+.+.|+-+.+-
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m 92 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVL 92 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEc
Confidence 5789999999887 89999998444555444566777888889887763
No 425
>PLN02672 methionine S-methyltransferase
Probab=34.34 E-value=4e+02 Score=31.56 Aligned_cols=50 Identities=12% Similarity=0.284 Sum_probs=37.0
Q ss_pred HHHHHHhhhhCCcEEEEcccccc--ccccHHHHHHHHhhcCCEEEehhhhhh
Q 010058 215 EQLEKSAALFRPKLIVAGASAYA--RLYDYARIRKVCDKQKAVMLADMAHIS 264 (519)
Q Consensus 215 d~l~~~i~~~k~klIi~~~sn~g--~~~d~~~i~~ia~~~~~~livD~ah~~ 264 (519)
|.+.+++++.||++|+.+--.+- ...-++.|.+.+++.|+.++.|+....
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1082)
T PLN02672 517 DLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHL 568 (1082)
T ss_pred hHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhhe
Confidence 46777888889999988722221 223478888999999999999987443
No 426
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=33.69 E-value=1.1e+02 Score=26.37 Aligned_cols=43 Identities=19% Similarity=0.185 Sum_probs=32.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcC
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~ 253 (519)
...++++-+++.++++.+|.++.-++.....++++.+.+++.|
T Consensus 38 ~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~g 80 (134)
T TIGR01501 38 LSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAG 80 (134)
T ss_pred CCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCC
Confidence 3568888888888899999887555555566888888888765
No 427
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=33.19 E-value=2.2e+02 Score=27.56 Aligned_cols=54 Identities=13% Similarity=0.189 Sum_probs=38.9
Q ss_pred CCHHHHHHHhhh----hCCcEEEEc--cccc-c---ccccHHHHHHHHhhcCCEEEehhhhhhh
Q 010058 212 IDYEQLEKSAAL----FRPKLIVAG--ASAY-A---RLYDYARIRKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 212 iD~d~l~~~i~~----~k~klIi~~--~sn~-g---~~~d~~~i~~ia~~~~~~livD~ah~~g 265 (519)
.++++++.++.. .+..++++- .+.| | ...|+..|..+.+..++.|++|..|..|
T Consensus 143 ~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 143 NTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 477777776543 245566553 3346 5 4678999999988889999999999866
No 428
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=32.17 E-value=98 Score=29.74 Aligned_cols=92 Identities=16% Similarity=0.148 Sum_probs=50.1
Q ss_pred eEEeCCcHH-HHHHHHHhhcCCCCEEEEec-CCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCC-CHHHHHHHh
Q 010058 145 NVQSLSGSP-ANFQVYTALLKPHERIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYI-DYEQLEKSA 221 (519)
Q Consensus 145 ~V~~~sGs~-a~~~~~~all~pGD~Vl~~~-~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~i-D~d~l~~~i 221 (519)
+|.+..||+ +-. +...|.+.|. |++.. .++++...... .. ..++. .+.+ |.+++++.+
T Consensus 2 ~ILvlgGTtE~r~-la~~L~~~g~-v~~sv~t~~g~~~~~~~--------~~-----~~~v~----~G~lg~~~~l~~~l 62 (249)
T PF02571_consen 2 KILVLGGTTEGRK-LAERLAEAGY-VIVSVATSYGGELLKPE--------LP-----GLEVR----VGRLGDEEGLAEFL 62 (249)
T ss_pred EEEEEechHHHHH-HHHHHHhcCC-EEEEEEhhhhHhhhccc--------cC-----CceEE----ECCCCCHHHHHHHH
Confidence 478889998 766 7788888888 55432 22222221000 00 00111 2456 888888888
Q ss_pred hhhCCcEEEEcccc-ccccccHHHHHHHHhhcCCEEE
Q 010058 222 ALFRPKLIVAGASA-YARLYDYARIRKVCDKQKAVML 257 (519)
Q Consensus 222 ~~~k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~li 257 (519)
.+++.++| +..++ |.... -+.+.+.|++.|+..+
T Consensus 63 ~~~~i~~v-IDATHPfA~~i-s~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 63 RENGIDAV-IDATHPFAAEI-SQNAIEACRELGIPYL 97 (249)
T ss_pred HhCCCcEE-EECCCchHHHH-HHHHHHHHhhcCcceE
Confidence 87666665 44332 33221 1345566776666544
No 429
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=31.59 E-value=1.4e+02 Score=25.69 Aligned_cols=53 Identities=17% Similarity=0.137 Sum_probs=36.1
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc----HHHHH-HHHhhc-CCE-EEehhh
Q 010058 209 TGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD----YARIR-KVCDKQ-KAV-MLADMA 261 (519)
Q Consensus 209 ~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d----~~~i~-~ia~~~-~~~-livD~a 261 (519)
+..-+++.|.+.+.++++..||++ |.+ .|...+ ..+++ ++.++. ++. .++|+.
T Consensus 35 ~~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr 96 (135)
T PF03652_consen 35 NREKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDER 96 (135)
T ss_dssp CCCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECS
T ss_pred CCchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCC
Confidence 346789999999999999999999 666 565444 23333 334444 665 558875
No 430
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=31.13 E-value=4.2e+02 Score=25.95 Aligned_cols=48 Identities=10% Similarity=0.143 Sum_probs=34.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEc--cccc-ccccc-----------HHHHHHHHhhcCCEEEe
Q 010058 211 YIDYEQLEKSAALFRPKLIVAG--ASAY-ARLYD-----------YARIRKVCDKQKAVMLA 258 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~--~sn~-g~~~d-----------~~~i~~ia~~~~~~liv 258 (519)
..|.+.+++.+.+.+|.+||-+ .++. .-..+ ...|+++|+++|+++|.
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh 97 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH 97 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE
Confidence 4578999999998899999876 4442 21111 24788999999998874
No 431
>KOG4759 consensus Ribosome recycling factor [Translation, ribosomal structure and biogenesis]
Probab=30.93 E-value=4.9e+02 Score=25.06 Aligned_cols=50 Identities=20% Similarity=0.270 Sum_probs=31.1
Q ss_pred HHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHh
Q 010058 401 SRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLAL 463 (519)
Q Consensus 401 ~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~ 463 (519)
..+.+...+.|..++ |- ..+..||++.+.+|+ |--+.++..+.+....++
T Consensus 156 kai~kAI~~S~lnlt----P~----~dg~~l~vsiP~~T~-----E~Re~laK~~~~~~ee~K 205 (263)
T KOG4759|consen 156 KAILKAIEASGLNLT----PN----LDGTVLRVSIPPVTK-----ESREKLAKVLKRYFEEYK 205 (263)
T ss_pred HHHHHHHHhCCCCCC----cC----CCCcEEEecCCCcCh-----HHHHHHHHHHHHHHHHHH
Confidence 344555555566554 22 234579999998887 666667776666655444
No 432
>smart00642 Aamy Alpha-amylase domain.
Probab=30.57 E-value=40 Score=30.14 Aligned_cols=27 Identities=7% Similarity=0.299 Sum_probs=24.1
Q ss_pred cccccccHHHHHHHHhhcCCEEEehhh
Q 010058 235 AYARLYDYARIRKVCDKQKAVMLADMA 261 (519)
Q Consensus 235 n~g~~~d~~~i~~ia~~~~~~livD~a 261 (519)
.+|...+++++++-|+++|+.||.|..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 467778999999999999999999975
No 433
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=29.67 E-value=1.4e+02 Score=25.00 Aligned_cols=48 Identities=6% Similarity=0.035 Sum_probs=33.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc---CCEEEe
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ---KAVMLA 258 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~---~~~liv 258 (519)
....+++.+.+.+.+|++|+++.++......++++.+..++. ++.+++
T Consensus 36 ~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~ 86 (122)
T cd02071 36 RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVG 86 (122)
T ss_pred CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 366788888887779999999866544445567777766665 344444
No 434
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=29.65 E-value=4.7e+02 Score=26.06 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=32.2
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccc
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAY 236 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~ 236 (519)
-....+.|+.+|+.++...++.+. ..++.++|+++-.+ .|.++++.+.|.
T Consensus 66 e~a~~l~p~k~vilp~~~a~C~~a----------------------------~~~~~~~i~~lk~~-~Pda~vvah~n~ 115 (310)
T TIGR00550 66 ETAKILNPEKTVLMPDLGAGCSMA----------------------------DMCPPEEFKKLKER-HPDAFVVTYVNT 115 (310)
T ss_pred HHHHHhCCCCEEEccCCCCCCccc----------------------------cccCHHHHHHHHHH-CCCCEEEEECCC
Confidence 334567899889887643333211 24667888876665 688888876664
No 435
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=29.43 E-value=1.1e+02 Score=24.74 Aligned_cols=50 Identities=4% Similarity=0.098 Sum_probs=39.9
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehh
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADM 260 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ 260 (519)
..+..++++.+...-..++.+.....|.+....++.++|+++|+.++.=.
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~ 53 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHS 53 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecC
Confidence 45778888888875567777777778888899999999999999888765
No 436
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=29.02 E-value=62 Score=27.68 Aligned_cols=50 Identities=16% Similarity=0.175 Sum_probs=30.3
Q ss_pred CCHHHHHHHhhhhCCcEEEEccccccccc------------cHHHHHHHHhhcCCEEEehhhh
Q 010058 212 IDYEQLEKSAALFRPKLIVAGASAYARLY------------DYARIRKVCDKQKAVMLADMAH 262 (519)
Q Consensus 212 iD~d~l~~~i~~~k~klIi~~~sn~g~~~------------d~~~i~~ia~~~~~~livD~ah 262 (519)
-|++-+.+.+.+.+.+.+++.++-+|... -++.|.++|+++|. =++|..+
T Consensus 36 ~Dl~l~L~~~k~~g~~~lfVi~PvNg~wydytG~~~~~r~~~y~kI~~~~~~~gf-~v~D~s~ 97 (130)
T PF04914_consen 36 DDLQLLLDVCKELGIDVLFVIQPVNGKWYDYTGLSKEMRQEYYKKIKYQLKSQGF-NVADFSD 97 (130)
T ss_dssp HHHHHHHHHHHHTT-EEEEEE----HHHHHHTT--HHHHHHHHHHHHHHHHTTT---EEE-TT
T ss_pred HHHHHHHHHHHHcCCceEEEecCCcHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC-EEEeccc
Confidence 36677777777778888887733333221 25789999999998 7788763
No 437
>COG0718 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.15 E-value=1.7e+02 Score=24.01 Aligned_cols=41 Identities=27% Similarity=0.313 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCC
Q 010058 445 EEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGF 510 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 510 (519)
++|.+.+-+.|..++..+.. ..-+..+++...++..+| |||
T Consensus 64 peD~E~LeDLi~aA~ndA~~------------------------kv~e~~~e~m~~~t~gm~-PG~ 104 (105)
T COG0718 64 PEDKEMLEDLILAAFNDAKK------------------------KVEETRKEKMGALTGGMP-PGF 104 (105)
T ss_pred cccHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHhhccCC-CCC
Confidence 58999999999888876531 122345777888888888 775
No 438
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=28.03 E-value=2.3e+02 Score=20.42 Aligned_cols=46 Identities=22% Similarity=0.206 Sum_probs=31.9
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEE
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVML 257 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~li 257 (519)
+.+.++++-+.+.+.+-+.+.++-.+ ......++.+.++++|+.++
T Consensus 13 ~~~~~~~~~~~a~~~g~~~v~iTDh~--~~~~~~~~~~~~~~~gi~~i 58 (67)
T smart00481 13 GALSPEELVKRAKELGLKAIAITDHG--NLFGAVEFYKAAKKAGIKPI 58 (67)
T ss_pred ccCCHHHHHHHHHHcCCCEEEEeeCC--cccCHHHHHHHHHHcCCeEE
Confidence 45678888777777688888887443 22335577788888887665
No 439
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=27.64 E-value=1.8e+02 Score=28.89 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=37.0
Q ss_pred eCCCCCCCCHHHHHHHhhhh-----CCcEEEEcccc-cc-ccccHHHHHHHHhhcCCEEEehhh
Q 010058 205 LDESTGYIDYEQLEKSAALF-----RPKLIVAGASA-YA-RLYDYARIRKVCDKQKAVMLADMA 261 (519)
Q Consensus 205 ~d~~~~~iD~d~l~~~i~~~-----k~klIi~~~sn-~g-~~~d~~~i~~ia~~~~~~livD~a 261 (519)
++..+..++.++++..++.. +-.+|+++.|- -| ....+.++.++|++.|+.+++|..
T Consensus 104 in~~Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 104 INFPGPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred ecCCCCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECC
Confidence 33344567777766654321 23556666333 22 233489999999999999999976
No 440
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=27.55 E-value=95 Score=30.96 Aligned_cols=105 Identities=16% Similarity=0.035 Sum_probs=59.5
Q ss_pred eEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee--eeeEEEeeeeCCCCCCCCHHHHHHHh
Q 010058 145 NVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS--IFFETMPYRLDESTGYIDYEQLEKSA 221 (519)
Q Consensus 145 ~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g--~~~~~v~~~~d~~~~~iD~d~l~~~i 221 (519)
.|++|.|+- .-.++...|++.|+.|++.|.-..+.+....... .+.+ ..+..+. ...-|.+.|++.+
T Consensus 4 ~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~----~l~~~~~~v~f~~------~Dl~D~~~L~kvF 73 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVR----QLLGEGKSVFFVE------GDLNDAEALEKLF 73 (343)
T ss_pred EEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHH----HhcCCCCceEEEE------eccCCHHHHHHHH
Confidence 588888876 4455788899999999998765554433222111 1111 2222222 2345889999998
Q ss_pred hhhCCcEEEE-cccc---cccccc----------HHHHHHHHhhcCCEEEeh
Q 010058 222 ALFRPKLIVA-GASA---YARLYD----------YARIRKVCDKQKAVMLAD 259 (519)
Q Consensus 222 ~~~k~klIi~-~~sn---~g~~~d----------~~~i~~ia~~~~~~livD 259 (519)
+..+...|+. ..-- +....| .=.+.++|+++|..-++=
T Consensus 74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~ 125 (343)
T KOG1371|consen 74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVF 125 (343)
T ss_pred hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEE
Confidence 8776665543 2100 111111 225567788888655544
No 441
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=27.47 E-value=52 Score=36.02 Aligned_cols=29 Identities=10% Similarity=0.234 Sum_probs=26.3
Q ss_pred ccc-ccccccHHHHHHHHhhcCCEEEehhh
Q 010058 233 ASA-YARLYDYARIRKVCDKQKAVMLADMA 261 (519)
Q Consensus 233 ~sn-~g~~~d~~~i~~ia~~~~~~livD~a 261 (519)
+++ ||.+.+++++++-|++.|+-||+|-.
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V 235 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWV 235 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 444 99999999999999999999999975
No 442
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=27.40 E-value=72 Score=29.29 Aligned_cols=90 Identities=22% Similarity=0.388 Sum_probs=52.5
Q ss_pred cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhhh
Q 010058 386 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKI 465 (519)
Q Consensus 386 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~ 465 (519)
+.+.++|+.+. ....+...++++||.+- | +..+ -|+ .+.|+.++++-+..+.....+
T Consensus 125 nGfiivDlPpE--Ea~~~Rne~~k~gislv----p------------LvaP-sTt----deRmell~~~adsFiYvVSrm 181 (268)
T KOG4175|consen 125 NGFIIVDLPPE--EAETLRNEARKHGISLV----P------------LVAP-STT----DERMELLVEAADSFIYVVSRM 181 (268)
T ss_pred CceEeccCChH--HHHHHHHHHHhcCceEE----E------------eeCC-CCh----HHHHHHHHHhhcceEEEEEec
Confidence 44677787653 34557778888999873 2 2222 244 677777776655443221111
Q ss_pred ccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCC-CCCC
Q 010058 466 KGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPT-VGFE 511 (519)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~-~~~~ 511 (519)
-. .|+. + ++...+++|-++|++++.+-|+ -||.
T Consensus 182 G~--TG~~-----~------svn~~l~~L~qrvrk~t~dtPlAVGFG 215 (268)
T KOG4175|consen 182 GV--TGTR-----E------SVNEKLQSLLQRVRKATGDTPLAVGFG 215 (268)
T ss_pred cc--cccH-----H------HHHHHHHHHHHHHHHhcCCCceeEeec
Confidence 10 1110 0 1125688999999999999997 5663
No 443
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=27.33 E-value=4e+02 Score=25.51 Aligned_cols=90 Identities=19% Similarity=0.109 Sum_probs=52.3
Q ss_pred eEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCC-CHHHHHHHhh
Q 010058 145 NVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYI-DYEQLEKSAA 222 (519)
Q Consensus 145 ~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~i-D~d~l~~~i~ 222 (519)
.|.+-.||+ +-. +...|.+.|-.|+++..+..+... . .+ + ++ -.+.+ |.+.+++.+.
T Consensus 4 ~IlvlgGT~egr~-la~~L~~~g~~v~~Svat~~g~~~--~---------~~-----~--~v--~~G~l~~~~~l~~~l~ 62 (248)
T PRK08057 4 RILLLGGTSEARA-LARALAAAGVDIVLSLAGRTGGPA--D---------LP-----G--PV--RVGGFGGAEGLAAYLR 62 (248)
T ss_pred eEEEEechHHHHH-HHHHHHhCCCeEEEEEccCCCCcc--c---------CC-----c--eE--EECCCCCHHHHHHHHH
Confidence 488889998 655 666777778877765432222110 0 00 0 01 12567 8999999998
Q ss_pred hhCCcEEEEcccc-ccccccHHHHHHHHhhcCCEEE
Q 010058 223 LFRPKLIVAGASA-YARLYDYARIRKVCDKQKAVML 257 (519)
Q Consensus 223 ~~k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~li 257 (519)
+++.++| +..++ |.... -+.+.+.|++.|+..+
T Consensus 63 ~~~i~~V-IDATHPfA~~i-s~~a~~ac~~~~ipyi 96 (248)
T PRK08057 63 EEGIDLV-IDATHPYAAQI-SANAAAACRALGIPYL 96 (248)
T ss_pred HCCCCEE-EECCCccHHHH-HHHHHHHHHHhCCcEE
Confidence 8777765 45443 43222 1345567777766544
No 444
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=26.71 E-value=44 Score=32.54 Aligned_cols=29 Identities=10% Similarity=0.321 Sum_probs=25.4
Q ss_pred cccccccccHHHHHHHHhhcCCEEEehhh
Q 010058 233 ASAYARLYDYARIRKVCDKQKAVMLADMA 261 (519)
Q Consensus 233 ~sn~g~~~d~~~i~~ia~~~~~~livD~a 261 (519)
.+.+|...+++++++.|+++|+.||.|.+
T Consensus 45 d~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 45 DPRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp STTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccchhhhhhhhhhccccccceEEEeee
Confidence 34578888999999999999999999975
No 445
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=26.61 E-value=2.9e+02 Score=24.89 Aligned_cols=65 Identities=17% Similarity=0.120 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
..+.++.+.+.+.+.+--+|+++.-......-.+++.+++++.++.++.=.-..-+++..|+.+.
T Consensus 20 ~~~~p~~aa~lI~~AKrPlIivG~ga~~~~ea~e~l~elaEkl~iPVvtT~~~~~~~~~kgv~~~ 84 (171)
T PRK00945 20 KIVSPKIAAMMIKKAKRPLLVVGSLLLDDEELLDRAVKIAKKANIPVAATGGSYKGLIDKGVDAK 84 (171)
T ss_pred cccCHHHHHHHHHhCCCcEEEECcCccccchHHHHHHHHHHHHCCCEEEccccccccccCCccCC
Confidence 34578888888876554466666322212334778999999999999876554455555555543
No 446
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=25.92 E-value=1.3e+02 Score=23.34 Aligned_cols=43 Identities=9% Similarity=-0.015 Sum_probs=31.0
Q ss_pred HHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEe
Q 010058 214 YEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLA 258 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~liv 258 (519)
.++..+++...+.++|++. ++.+. .-.+.|..+|+++++.++.
T Consensus 16 ~~~v~kai~~gkaklViiA-~D~~~-~~~~~i~~~c~~~~Vp~~~ 58 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVA-EDADP-RLTEKVEALANEKGVPVSK 58 (82)
T ss_pred HHHHHHHHHcCCeeEEEEE-CCCCH-HHHHHHHHHHHHcCCCEEE
Confidence 5667777877688888885 33222 3577899999999987754
No 447
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=25.28 E-value=2.1e+02 Score=26.31 Aligned_cols=51 Identities=10% Similarity=0.155 Sum_probs=38.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcC----CEEEehhh
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK----AVMLADMA 261 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~----~~livD~a 261 (519)
.+..+++.+.+.+.+|.+|.++.+.+.....++++.+.+++.+ +.+++=++
T Consensus 121 ~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~ 175 (197)
T TIGR02370 121 DVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGA 175 (197)
T ss_pred CCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEECh
Confidence 4678999999988899999998777666667788887777763 56666443
No 448
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=25.11 E-value=4.1e+02 Score=25.60 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=51.4
Q ss_pred EEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh
Q 010058 146 VQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 146 V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~ 224 (519)
|++..||+ +.. +...|.+.|.+|+++.-+..+.. ...-.| .. ++. .+.+|.+.+++.+.+.
T Consensus 3 ILvlGGT~egr~-la~~L~~~g~~v~~s~~t~~~~~---------~~~~~g--~~--~v~----~g~l~~~~l~~~l~~~ 64 (256)
T TIGR00715 3 VLLMGGTVDSRA-IAKGLIAQGIEILVTVTTSEGKH---------LYPIHQ--AL--TVH----TGALDPQELREFLKRH 64 (256)
T ss_pred EEEEechHHHHH-HHHHHHhCCCeEEEEEccCCccc---------cccccC--Cc--eEE----ECCCCHHHHHHHHHhc
Confidence 77788877 544 66777788888887653221110 000001 00 111 2467888998888887
Q ss_pred CCcEEEEccccccccccHHHHHHHHhhcCCEEE
Q 010058 225 RPKLIVAGASAYARLYDYARIRKVCDKQKAVML 257 (519)
Q Consensus 225 k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~li 257 (519)
++++|+-..+-|.... -+-+.+.|++.|+..+
T Consensus 65 ~i~~VIDAtHPfA~~i-s~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 65 SIDILVDATHPFAAQI-TTNATAVCKELGIPYV 96 (256)
T ss_pred CCCEEEEcCCHHHHHH-HHHHHHHHHHhCCcEE
Confidence 7887654333233211 1344567777666544
No 449
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=24.80 E-value=1.9e+02 Score=24.69 Aligned_cols=43 Identities=19% Similarity=0.132 Sum_probs=30.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcC
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK 253 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~ 253 (519)
..+++++-+++.+.++.+|.++.........++++.+..++.+
T Consensus 39 ~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 39 FQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG 81 (132)
T ss_pred CCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC
Confidence 4567787777777799999998555444455777777777653
No 450
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=24.80 E-value=2e+02 Score=26.38 Aligned_cols=50 Identities=8% Similarity=0.101 Sum_probs=36.8
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc----CCEEEehh
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ----KAVMLADM 260 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~----~~~livD~ 260 (519)
.+..+++.+.+.+.+|.+|.++.+.+.....++++.+..++. ++.+++=+
T Consensus 119 ~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG 172 (201)
T cd02070 119 DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGG 172 (201)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEEC
Confidence 467899999998889999999876666666777777777665 34555543
No 451
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=24.66 E-value=50 Score=35.09 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=27.8
Q ss_pred cccccccccHHHHHHHHhhcCCEEEehhh--hhh
Q 010058 233 ASAYARLYDYARIRKVCDKQKAVMLADMA--HIS 264 (519)
Q Consensus 233 ~sn~g~~~d~~~i~~ia~~~~~~livD~a--h~~ 264 (519)
.+.+|...+++++++.|+++|+.||+|.+ |.+
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 35688999999999999999999999986 554
No 452
>PRK14624 hypothetical protein; Provisional
Probab=23.94 E-value=1.9e+02 Score=24.16 Aligned_cols=42 Identities=14% Similarity=0.090 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCC
Q 010058 445 EEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGF 510 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 510 (519)
++|.+.+-+.|..++..+.+ ..-+..+++...++...|+||+
T Consensus 65 ~eD~E~LeDLI~aAvNdA~~------------------------k~~e~~~e~m~~~tgGm~lPGl 106 (115)
T PRK14624 65 ADDNKMLEDLVMAATNDALK------------------------KAKEATAYEFQNASGGLDFSEI 106 (115)
T ss_pred cccHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHhCCCCCCch
Confidence 58899999999888876532 2224566778889999999985
No 453
>TIGR00629 uvde UV damage endonuclease UvdE. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=23.44 E-value=87 Score=31.16 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=28.0
Q ss_pred EccccccccccHHHHHHHHhhcCCEEEehhhhh
Q 010058 231 AGASAYARLYDYARIRKVCDKQKAVMLADMAHI 263 (519)
Q Consensus 231 ~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~ 263 (519)
+..-|.+....++++..+|++.+++++.|-.|.
T Consensus 190 L~lEnd~k~~sl~evL~lc~e~~iP~v~D~hHh 222 (312)
T TIGR00629 190 LVLENDDVTWTVEDLLPVCEELNIPFVLDFHHH 222 (312)
T ss_pred EEeccCCCcCCHHHHHHHHHhcCCCEEEEhHHh
Confidence 445566777899999999999999999998765
No 454
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=23.40 E-value=1.8e+02 Score=23.80 Aligned_cols=52 Identities=10% Similarity=0.044 Sum_probs=35.0
Q ss_pred CCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc--CCEEEehhhhh
Q 010058 212 IDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ--KAVMLADMAHI 263 (519)
Q Consensus 212 iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~--~~~livD~ah~ 263 (519)
...+.+.+.+.+.+|++|.++.+.......++.+.++.+++ ++.+++=+.|.
T Consensus 37 ~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~ 90 (125)
T cd02065 37 VPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHP 90 (125)
T ss_pred CCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcC
Confidence 45677777777779999998854433445667777777776 47777655443
No 455
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=23.37 E-value=5.6e+02 Score=24.76 Aligned_cols=50 Identities=22% Similarity=0.410 Sum_probs=35.1
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEc-cccc--cc-------cccHHHHHHHHhhcCCEEEeh
Q 010058 209 TGYIDYEQLEKSAALFRPKLIVAG-ASAY--AR-------LYDYARIRKVCDKQKAVMLAD 259 (519)
Q Consensus 209 ~~~iD~d~l~~~i~~~k~klIi~~-~sn~--g~-------~~d~~~i~~ia~~~~~~livD 259 (519)
.|.++-+.++-.++. +|.+++++ |+.| |. ...++-+.+|+++-+..+++|
T Consensus 186 qGp~~~~~l~~i~e~-~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~~lViD 245 (304)
T COG2248 186 QGPINDEALEFILEK-RPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNATLVID 245 (304)
T ss_pred cCCCccHHHHHHHhc-CCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCcceEEEe
Confidence 356677777776666 99999998 5552 21 122557778888888889888
No 456
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=23.27 E-value=2.2e+02 Score=26.73 Aligned_cols=48 Identities=10% Similarity=0.047 Sum_probs=30.6
Q ss_pred CCCHHHHHHHhh----hhCCcEEEEccc-c--ccc--ccc-------HHHHHHHHhhcCCEEEe
Q 010058 211 YIDYEQLEKSAA----LFRPKLIVAGAS-A--YAR--LYD-------YARIRKVCDKQKAVMLA 258 (519)
Q Consensus 211 ~iD~d~l~~~i~----~~k~klIi~~~s-n--~g~--~~d-------~~~i~~ia~~~~~~liv 258 (519)
.+++++|++.+. ++++++||+.+- . .+. ... +..|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 467777776554 348899999822 2 121 111 45778889999987765
No 457
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=23.15 E-value=1.8e+02 Score=30.80 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhcCCEEecCCC-----------CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeE
Q 010058 364 NSSKFARSLLERGYDLVSGGT-----------ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGI 431 (519)
Q Consensus 364 ~~~~l~~~L~~~g~~~~~~~~-----------~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~i 431 (519)
.++.+.+.|...|+.+..-.+ ...+++.|++-++.++-++.+.+.+.+-.+-...+.|+. -+.....+
T Consensus 16 ir~~l~~~L~~~G~~v~~a~~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~ 95 (464)
T COG2204 16 IRELLEQALELAGYEVVTAESAEEALEALSESPFDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVMTGHGDIDTAVEAL 95 (464)
T ss_pred HHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCCEEEEeCCCCHHHHHHHH
Confidence 345566667777776654211 234677788777889999888887654111000012221 01112346
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHHHHhhhccCC--CCCchhhHHhhhccccchHHHHHHHHHHHHHHHh
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLALKIKGDT--KGTKLKDFVATLMSDESIQSEISNLRDKVEEYAK 503 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 503 (519)
|.|.-.+-+. +-+.+++...+.+++.......+.. ......++...+.. + ..++++++.+..++.
T Consensus 96 k~GA~Dfl~K---P~~~~~L~~~v~ral~~~~~~~e~~~~~~~~~~~~~~liG~--S--~am~~l~~~i~kvA~ 162 (464)
T COG2204 96 RLGAFDFLEK---PFDLDRLLAIVERALELRELQRENRRSLKRAKSLGGELVGE--S--PAMQQLRRLIAKVAP 162 (464)
T ss_pred hcCcceeeeC---CCCHHHHHHHHHHHHHHhhhhhhhhhhhhccccccCCceec--C--HHHHHHHHHHHHHhC
Confidence 6665444443 5678888999988887543321110 00001123344444 3 778999999988874
No 458
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=23.11 E-value=2e+02 Score=22.58 Aligned_cols=44 Identities=9% Similarity=0.197 Sum_probs=30.3
Q ss_pred HHHHHHHhhhhCCcEEEEccccccccccHHH-HHHHHhhcCCEEEeh
Q 010058 214 YEQLEKSAALFRPKLIVAGASAYARLYDYAR-IRKVCDKQKAVMLAD 259 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~-i~~ia~~~~~~livD 259 (519)
+.++.+.+...+.++|++.....+ ..... +..+|.+++++++.=
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~~--~~~~~~l~~~c~~~~Ip~~~~ 64 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCSP--DSIKKHLPALCEEKNIPYVFV 64 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSSS--GHHHHHHHHHHHHTTEEEEEE
T ss_pred hHHHHHHHHcCCCcEEEEcCCCCh--hhhcccchhheeccceeEEEE
Confidence 567777777767788887533222 34555 888999999887643
No 459
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=23.09 E-value=3e+02 Score=22.63 Aligned_cols=45 Identities=18% Similarity=0.344 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEE
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVML 257 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~li 257 (519)
..+|.+.+.+.+.+....++ .+.||....-.++.+.|.+.|+.++
T Consensus 59 ~yl~~e~I~~ia~~~g~~~i---~pGyg~lse~~~fa~~~~~~gi~fi 103 (110)
T PF00289_consen 59 SYLNIEAIIDIARKEGADAI---HPGYGFLSENAEFAEACEDAGIIFI 103 (110)
T ss_dssp TTTSHHHHHHHHHHTTESEE---ESTSSTTTTHHHHHHHHHHTT-EES
T ss_pred hhccHHHHhhHhhhhcCccc---ccccchhHHHHHHHHHHHHCCCEEE
Confidence 45899999999887433332 4557777778888888988888765
No 460
>PF02445 NadA: Quinolinate synthetase A protein; InterPro: IPR003473 Quinolinate synthetase catalyzes the second step of the de novo biosynthetic pathway of pyridine nucleotide formation. In particular, quinolinate synthetase is involved in the condensation of dihydroxyacetone phosphate and iminoaspartate to form quinolinic acid []. This synthesis requires two enzymes, an FAD-containing "B protein" and an "A protein".; GO: 0008987 quinolinate synthetase A activity, 0009435 NAD biosynthetic process; PDB: 2QS0_A 1WZU_A.
Probab=23.09 E-value=2.3e+02 Score=27.98 Aligned_cols=61 Identities=15% Similarity=0.229 Sum_probs=32.4
Q ss_pred eEEeCCcHH--HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhh
Q 010058 145 NVQSLSGSP--ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAA 222 (519)
Q Consensus 145 ~V~~~sGs~--a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~ 222 (519)
.+++-.|.. |-. ..+|+|+-+|+++++..|+.+ + ..++.+++++.-.
T Consensus 48 ~~IVfcGV~FMAEt---AkIL~P~K~VllPd~~AgC~M-------------A---------------dm~~~~~v~~~k~ 96 (296)
T PF02445_consen 48 DIIVFCGVHFMAET---AKILNPDKKVLLPDPEAGCPM-------------A---------------DMATAEDVRELKE 96 (296)
T ss_dssp SEEEEES-HHHHHH---HHHH-TTSEEE-SS------------------------------------TT--HHHHHHHHH
T ss_pred CEEEEecceehHhh---HHhhCCCCEEEecCCCCCCch-------------h---------------hhCCHHHHHHHHH
Confidence 477788876 433 245679999999885443322 1 3467788876555
Q ss_pred hhCCcEEEEcccccc
Q 010058 223 LFRPKLIVAGASAYA 237 (519)
Q Consensus 223 ~~k~klIi~~~sn~g 237 (519)
+ -|.++++++-|+.
T Consensus 97 ~-~p~~~vV~YVNss 110 (296)
T PF02445_consen 97 E-YPDAAVVTYVNSS 110 (296)
T ss_dssp H-STTS-EEEESSS-
T ss_pred H-CCCCeEEEEecCh
Confidence 5 5888888866643
No 461
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=21.75 E-value=3.4e+02 Score=22.41 Aligned_cols=46 Identities=11% Similarity=0.064 Sum_probs=33.4
Q ss_pred HHHHHHhhhhCCcEEEEccc--c-ccccccHHHHHHHHhhcCCEEEehh
Q 010058 215 EQLEKSAALFRPKLIVAGAS--A-YARLYDYARIRKVCDKQKAVMLADM 260 (519)
Q Consensus 215 d~l~~~i~~~k~klIi~~~s--n-~g~~~d~~~i~~ia~~~~~~livD~ 260 (519)
.++.+.+...+..+|+..++ . -+...|-..|++.|-+++++++.-.
T Consensus 60 ~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~~Ip~~Ttl 108 (115)
T cd01422 60 QQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVYNIPLATNR 108 (115)
T ss_pred hHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHcCCCEEEcH
Confidence 45677777767787776654 2 2325678899999999999888643
No 462
>TIGR03275 methan_mark_8 putative methanogenesis marker protein 8. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=21.54 E-value=26 Score=33.09 Aligned_cols=83 Identities=27% Similarity=0.324 Sum_probs=50.4
Q ss_pred eCCCCCCCCH-HHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEE
Q 010058 205 LDESTGYIDY-EQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVT 283 (519)
Q Consensus 205 ~d~~~~~iD~-d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~ 283 (519)
+|+++-.+|. .-++.++.. .-|=|.++-. ...+.++|+++=.++|+-++.=..|..|....+-. .-+.++|+++
T Consensus 142 Ld~~tA~IDq~~Gv~~Aie~-Gyk~IaVTv~---~~~~a~~iRe~e~~~~~~~~if~VHtTGis~eea~-~~~~~aDivt 216 (259)
T TIGR03275 142 LDPDTATIDQIKGVEKAIEL-GYKKIAVTVA---DAEDAKAIRELESESGIDIIIFAVHTTGIDREDAE-EVVQYADIVT 216 (259)
T ss_pred eCCccccccHHHHHHHHHHc-CCceEEEEec---CHHHHHHHHHhccccCCcEEEEEEECCCCCHHHHH-HHHHhhhHHH
Confidence 4455556663 446666664 3343433311 23567888888777776666666788776433211 1123799999
Q ss_pred EcCCCcccC
Q 010058 284 TTTHKSLRG 292 (519)
Q Consensus 284 ~S~~K~l~G 292 (519)
...+|+++.
T Consensus 217 ~CASK~ire 225 (259)
T TIGR03275 217 SCASKNIRE 225 (259)
T ss_pred HhchHHHHH
Confidence 999998753
No 463
>COG0233 Frr Ribosome recycling factor [Translation, ribosomal structure and biogenesis]
Probab=21.36 E-value=5.2e+02 Score=23.57 Aligned_cols=46 Identities=22% Similarity=0.288 Sum_probs=27.2
Q ss_pred HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 400 GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 400 ~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
-..+++.....++.++ |.. .+..||+.+|.+|+ |-=..++..+++.
T Consensus 77 ~~~IekaI~~snLgln----P~~----dG~~IRv~~P~lTe-----ErRkelvK~~k~~ 122 (187)
T COG0233 77 VKAIEKAILASNLGLN----PNN----DGNVIRVPLPPLTE-----ERRKELVKVAKKY 122 (187)
T ss_pred HHHHHHHHHHcCCCCC----cCc----CCCeEEecCCCCCH-----HHHHHHHHHHHHH
Confidence 3456666666666665 322 24569999998886 4444444444443
No 464
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=20.86 E-value=1.8e+02 Score=22.56 Aligned_cols=45 Identities=9% Similarity=0.032 Sum_probs=31.9
Q ss_pred HHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehh
Q 010058 214 YEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADM 260 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ 260 (519)
.++..++++..+.++|++. ++.+ ..-.+.|.+.|+.+++.++...
T Consensus 13 ~~~vlkaIk~gkakLViiA-~Da~-~~~~k~i~~~c~~~~Vpv~~~~ 57 (82)
T PRK13601 13 AKQTLKAITNCNVLQVYIA-KDAE-EHVTKKIKELCEEKSIKIVYID 57 (82)
T ss_pred hHHHHHHHHcCCeeEEEEe-CCCC-HHHHHHHHHHHHhCCCCEEEeC
Confidence 3566677776688888885 3323 3457899999999999886543
No 465
>TIGR00496 frr ribosome recycling factor. This model finds only eubacterial proteins. Mitochondrial and/or chloroplast forms might be expected but are not currently known. This protein was previously called ribosome releasing factor. By releasing ribosomes from mRNA at the end of protein biosynthesis, it prevents inappropriate translation from 3-prime regions of the mRNA and frees the ribosome for new rounds of translation. EGAD|53116|YHR038W is part of the frr superfamily.
Probab=20.85 E-value=4.5e+02 Score=23.70 Aligned_cols=47 Identities=21% Similarity=0.313 Sum_probs=28.6
Q ss_pred HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 400 GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 400 ~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
...+...+...++.++ |.. .+..||+.+|.+|. |-=..++..+++..
T Consensus 66 ~~~I~kAI~~s~lgln----P~~----dg~~Iri~iP~lT~-----E~RkelvK~~k~~~ 112 (176)
T TIGR00496 66 INAIEKAIQRSDLGLN----PNN----DGSVIRVNFPPLTE-----ERRKELVKHAKKIA 112 (176)
T ss_pred HHHHHHHHHHCCCCCC----ccc----CCCEEEecCCCCCH-----HHHHHHHHHHHHHH
Confidence 3457777777787776 332 23579999998775 33334444444433
No 466
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=20.80 E-value=2.9e+02 Score=22.70 Aligned_cols=47 Identities=15% Similarity=0.105 Sum_probs=34.4
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEeh
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLAD 259 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD 259 (519)
.++.++++..+.. +|.+|+++.-.++... -.++.+.++++|+-+-+-
T Consensus 39 ~l~~e~l~~l~~~-~peiliiGTG~~~~~~-~~~~~~~l~~~gi~vE~m 85 (109)
T cd05560 39 DLTAAHFEALLAL-QPEVILLGTGERQRFP-PPALLAPLLARGIGVEVM 85 (109)
T ss_pred cCCHHHHHHHHhc-CCCEEEEecCCCCCcC-CHHHHHHHHHcCCeEEEE
Confidence 6889999988876 8999999844444444 467777888888765543
No 467
>PLN02673 quinolinate synthetase A
Probab=20.52 E-value=7.6e+02 Score=27.50 Aligned_cols=100 Identities=8% Similarity=-0.046 Sum_probs=51.7
Q ss_pred hcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 010058 59 EIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD 138 (519)
Q Consensus 59 ~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~ 138 (519)
.-|++..+.|.+.++ .++.+ |-..+|..|+|++... .....|..++.| |.|+ ++ +.+++.-..+
T Consensus 253 ~p~~~~v~eI~~lkk-ek~av--ILAH~Yq~pEVQ~iAD-a~~~~~p~~~vG----------DSL~-LA-~~A~~~~~~~ 316 (724)
T PLN02673 253 FPEESKVEELVNVLK-EKKIG--VVAHFYMDPEVQGVLT-AAQKHWPHISIS----------DSLI-MA-DSAVKMAKAG 316 (724)
T ss_pred CCCHHHHHHHHHHHH-hcCcE--EEEecCCCHHHHHHhh-hhhcccCCCeec----------cHHH-HH-HHHHHhccCC
Confidence 346677777776654 34443 3478999999965443 333334222222 3343 33 2332222333
Q ss_pred CCCCcceEEeCCcHHHHHHHHHhhcCCC----CEE-EEecCCCccc
Q 010058 139 PAKWGVNVQSLSGSPANFQVYTALLKPH----ERI-MALDLPHGGH 179 (519)
Q Consensus 139 ~~~~~~~V~~~sGs~a~~~~~~all~pG----D~V-l~~~~~~~~~ 179 (519)
. .+++..|...+--....+|+|. .+| ++++...|+.
T Consensus 317 a-----~~IVFcGV~FMAEtA~kIL~p~~~~~k~V~llPd~~AGCs 357 (724)
T PLN02673 317 C-----QFITVLGVDFMSENVRAILDQAGFGEVGVYRMSNERIGCS 357 (724)
T ss_pred C-----CEEEEeceeeHHhhHHHhcCCCccCCceEEeCCCCCCCCC
Confidence 3 3677777762222344577875 456 5777554443
No 468
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=20.36 E-value=1.2e+02 Score=25.60 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=21.1
Q ss_pred HHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEe
Q 010058 217 LEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLA 258 (519)
Q Consensus 217 l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~liv 258 (519)
+++.+.. ++-+||++... .+.+.+.++|++++++|+.
T Consensus 74 l~~l~~~-~~P~iIvt~~~----~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 74 LEKLFSY-NPPCIIVTRGL----EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp HHHHCTT-T-S-EEEETTT-------HHHHHHHHHCT--EEE
T ss_pred HHHHhCC-CCCEEEEECcC----CCCHHHHHHHHHhCCcEEE
Confidence 4444443 77777776332 4578999999999998774
No 469
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=20.28 E-value=77 Score=32.09 Aligned_cols=37 Identities=14% Similarity=0.357 Sum_probs=26.8
Q ss_pred CCcEEEEccccccc--c-------c--------c--HHHHHHHHhhcCCEEEehhh
Q 010058 225 RPKLIVAGASAYAR--L-------Y--------D--YARIRKVCDKQKAVMLADMA 261 (519)
Q Consensus 225 k~klIi~~~sn~g~--~-------~--------d--~~~i~~ia~~~~~~livD~a 261 (519)
+..+||.||++|.. . . | --+|+++|++||+.++.|-.
T Consensus 262 ~AdvVItNPTH~AVAlkY~~~~~~AP~VvAKG~d~~AlkIreiA~e~~Ipi~enpp 317 (363)
T COG1377 262 KADVVITNPTHYAVALKYDPEKMPAPVVVAKGVDLVALKIREIAKEHGIPIIENPP 317 (363)
T ss_pred CCCEEeeCcCceeeeeeeccccCCCCEEEEeCCcHHHHHHHHHHHHcCCceecChH
Confidence 45678888888641 1 1 1 13899999999999999953
No 470
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=20.27 E-value=2.8e+02 Score=25.90 Aligned_cols=50 Identities=12% Similarity=0.169 Sum_probs=36.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc--CCEEEehh
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ--KAVMLADM 260 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~--~~~livD~ 260 (519)
.+.++++.+.+.+.+|++|.++.+.+.....++++.+..++. ++.+++=+
T Consensus 125 ~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vGG 176 (213)
T cd02069 125 MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIGG 176 (213)
T ss_pred CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 467899999999889999999866655566677777666665 44555443
Done!