Query 010058
Match_columns 519
No_of_seqs 462 out of 3170
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 18:57:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010058.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010058hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 2E-101 6E-106 775.2 38.8 457 54-512 32-489 (490)
2 2a7v_A Serine hydroxymethyltra 100.0 1.6E-71 5.6E-76 583.9 37.5 456 55-512 33-489 (490)
3 1rv3_A Serine hydroxymethyltra 100.0 1.4E-65 4.7E-70 543.0 42.5 465 48-512 16-482 (483)
4 3h7f_A Serine hydroxymethyltra 100.0 2.4E-51 8.1E-56 430.4 36.4 415 51-512 20-441 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 6.8E-48 2.3E-52 399.8 41.2 408 56-509 5-413 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 8.9E-46 3E-50 384.1 37.0 408 57-508 11-419 (420)
7 3ecd_A Serine hydroxymethyltra 100.0 5.2E-45 1.8E-49 378.9 38.4 417 51-507 7-424 (425)
8 2vi8_A Serine hydroxymethyltra 100.0 1.4E-40 4.8E-45 343.4 36.5 402 55-502 2-404 (405)
9 2dkj_A Serine hydroxymethyltra 100.0 2E-40 6.8E-45 342.5 37.2 402 58-508 5-407 (407)
10 3zrp_A Serine-pyruvate aminotr 100.0 1E-29 3.5E-34 259.7 28.7 345 79-462 4-363 (384)
11 4hvk_A Probable cysteine desul 100.0 1.5E-29 5.2E-34 257.9 26.4 342 84-464 8-375 (382)
12 3isl_A Purine catabolism prote 100.0 9.7E-29 3.3E-33 255.5 32.3 349 77-462 11-390 (416)
13 2dr1_A PH1308 protein, 386AA l 100.0 1.7E-28 5.7E-33 251.0 32.0 344 80-462 23-379 (386)
14 3nnk_A Ureidoglycine-glyoxylat 100.0 7.4E-29 2.5E-33 256.0 29.5 348 78-462 14-390 (411)
15 1iug_A Putative aspartate amin 100.0 6.6E-29 2.3E-33 250.8 28.1 337 79-461 3-347 (352)
16 3f0h_A Aminotransferase; RER07 100.0 5.1E-29 1.8E-33 254.2 26.6 346 76-460 18-372 (376)
17 2huf_A Alanine glyoxylate amin 100.0 2.4E-28 8.3E-33 250.7 30.2 335 77-462 19-383 (393)
18 1kmj_A Selenocysteine lyase; p 100.0 1.5E-28 5.3E-33 252.9 28.4 343 77-461 23-404 (406)
19 3kgw_A Alanine-glyoxylate amin 100.0 2.2E-28 7.4E-33 250.6 28.7 335 77-462 23-388 (393)
20 3lvm_A Cysteine desulfurase; s 100.0 1.8E-28 6.1E-33 254.3 27.6 352 70-464 15-401 (423)
21 2yrr_A Aminotransferase, class 100.0 1.8E-28 6.2E-33 247.3 26.5 330 79-460 2-351 (353)
22 1t3i_A Probable cysteine desul 100.0 3.5E-28 1.2E-32 251.5 29.1 340 78-461 29-412 (420)
23 1vjo_A Alanine--glyoxylate ami 100.0 4.6E-28 1.6E-32 248.7 29.7 329 78-459 35-392 (393)
24 1gd9_A Aspartate aminotransfer 100.0 2.7E-28 9.4E-33 250.1 27.9 362 55-461 5-385 (389)
25 2z9v_A Aspartate aminotransfer 100.0 7.6E-28 2.6E-32 246.9 29.9 329 82-462 14-371 (392)
26 3tqx_A 2-amino-3-ketobutyrate 100.0 5.6E-28 1.9E-32 248.4 28.6 335 77-461 44-395 (399)
27 2ch1_A 3-hydroxykynurenine tra 100.0 7.2E-28 2.5E-32 247.4 29.1 348 78-462 19-383 (396)
28 3cai_A Possible aminotransfera 100.0 2.7E-28 9.1E-33 251.6 25.8 341 78-457 27-404 (406)
29 3dzz_A Putative pyridoxal 5'-p 100.0 2.6E-28 8.9E-33 250.1 25.4 340 77-461 28-388 (391)
30 4eb5_A Probable cysteine desul 100.0 3.8E-28 1.3E-32 248.0 26.0 342 84-464 8-375 (382)
31 1m32_A 2-aminoethylphosphonate 100.0 5.8E-28 2E-32 244.8 26.7 345 78-460 5-363 (366)
32 3get_A Histidinol-phosphate am 100.0 6.2E-28 2.1E-32 245.3 26.6 319 76-459 30-364 (365)
33 3f9t_A TDC, L-tyrosine decarbo 100.0 3.1E-27 1.1E-31 242.0 31.9 330 79-460 33-396 (397)
34 1eg5_A Aminotransferase; PLP-d 100.0 8.8E-28 3E-32 245.3 26.3 341 79-461 3-375 (384)
35 3h14_A Aminotransferase, class 100.0 1.5E-27 5.2E-32 244.9 28.1 353 62-462 17-382 (391)
36 1elu_A L-cysteine/L-cystine C- 100.0 2.8E-28 9.5E-33 249.7 22.1 347 77-457 16-387 (390)
37 1b5p_A Protein (aspartate amin 100.0 1.9E-27 6.6E-32 243.8 27.8 333 76-459 31-382 (385)
38 4dq6_A Putative pyridoxal phos 100.0 1.7E-27 5.9E-32 244.0 27.5 335 76-459 32-390 (391)
39 3kax_A Aminotransferase, class 100.0 1.6E-27 5.6E-32 243.5 26.6 336 76-459 24-382 (383)
40 2w8t_A SPT, serine palmitoyltr 100.0 4.2E-27 1.4E-31 244.8 29.4 335 78-462 66-415 (427)
41 3ffr_A Phosphoserine aminotran 100.0 1.9E-27 6.4E-32 240.9 25.2 343 77-459 4-361 (362)
42 3ffh_A Histidinol-phosphate am 100.0 1.6E-26 5.4E-31 234.7 31.9 337 55-458 8-362 (363)
43 1j32_A Aspartate aminotransfer 100.0 7.5E-27 2.6E-31 239.3 29.3 339 75-461 29-386 (388)
44 3ly1_A Putative histidinol-pho 100.0 1.9E-26 6.6E-31 233.2 31.8 319 76-460 16-350 (354)
45 1fc4_A 2-amino-3-ketobutyrate 100.0 2.9E-27 1E-31 243.5 25.9 334 77-461 46-396 (401)
46 3l8a_A METC, putative aminotra 100.0 3.1E-27 1.1E-31 245.2 26.1 341 75-460 60-420 (421)
47 1bs0_A Protein (8-amino-7-oxon 100.0 5.9E-27 2E-31 239.8 27.4 332 77-458 40-383 (384)
48 2bkw_A Alanine-glyoxylate amin 100.0 9.3E-27 3.2E-31 237.9 28.6 344 77-460 5-382 (385)
49 3euc_A Histidinol-phosphate am 100.0 1.8E-26 6.2E-31 234.7 30.4 321 76-459 30-365 (367)
50 1v2d_A Glutamine aminotransfer 100.0 4.5E-27 1.5E-31 240.5 25.2 353 54-462 4-371 (381)
51 3vax_A Putative uncharacterize 100.0 2.6E-28 8.8E-33 251.1 15.9 340 77-460 20-398 (400)
52 3hbx_A GAD 1, glutamate decarb 100.0 3.3E-26 1.1E-30 242.6 32.5 344 86-464 66-446 (502)
53 2z61_A Probable aspartate amin 100.0 7.6E-27 2.6E-31 237.8 26.5 330 75-460 28-369 (370)
54 3g0t_A Putative aminotransfera 100.0 1.3E-26 4.5E-31 241.4 28.2 352 75-460 43-435 (437)
55 2dou_A Probable N-succinyldiam 100.0 5.2E-27 1.8E-31 239.6 24.6 335 76-459 25-375 (376)
56 2o0r_A RV0858C (N-succinyldiam 100.0 4.1E-27 1.4E-31 243.4 23.9 364 54-460 4-394 (411)
57 1o4s_A Aspartate aminotransfer 100.0 9.9E-27 3.4E-31 238.8 26.2 331 75-460 40-387 (389)
58 1xi9_A Putative transaminase; 100.0 1.1E-26 3.9E-31 239.7 26.7 343 75-461 37-402 (406)
59 2gb3_A Aspartate aminotransfer 100.0 1.5E-26 5.2E-31 239.1 27.2 352 64-462 31-402 (409)
60 3kki_A CAI-1 autoinducer synth 100.0 1.3E-26 4.6E-31 239.4 26.8 321 88-461 74-403 (409)
61 1c7n_A Cystalysin; transferase 100.0 1.3E-26 4.6E-31 238.4 26.3 339 77-462 32-393 (399)
62 1u08_A Hypothetical aminotrans 100.0 2E-26 7E-31 236.0 27.2 355 57-457 12-385 (386)
63 3cq5_A Histidinol-phosphate am 100.0 1.5E-25 5.2E-30 228.2 33.3 325 79-460 33-366 (369)
64 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 4.8E-28 1.6E-32 246.4 14.6 336 77-461 8-369 (371)
65 3nra_A Aspartate aminotransfer 99.9 1.1E-26 3.7E-31 239.5 24.3 341 78-461 41-404 (407)
66 2x5d_A Probable aminotransfera 99.9 2.7E-26 9.1E-31 237.4 26.5 339 76-462 37-398 (412)
67 3ele_A Amino transferase; RER0 99.9 4E-26 1.4E-30 234.8 27.1 341 76-461 35-395 (398)
68 1yiz_A Kynurenine aminotransfe 99.9 4.5E-26 1.5E-30 236.9 27.8 364 56-459 18-426 (429)
69 3dr4_A Putative perosamine syn 99.9 2.7E-27 9.3E-32 243.1 18.3 335 77-459 23-390 (391)
70 1d2f_A MALY protein; aminotran 99.9 6.8E-26 2.3E-30 232.5 28.3 338 77-460 29-387 (390)
71 3p1t_A Putative histidinol-pho 99.9 1.2E-25 3.9E-30 225.8 29.3 323 66-460 6-335 (337)
72 3fvs_A Kynurenine--oxoglutarat 99.9 2.1E-26 7.3E-31 238.7 24.4 367 54-460 7-420 (422)
73 3e9k_A Kynureninase; kynurenin 99.9 1.6E-27 5.6E-32 250.6 15.8 351 78-461 68-460 (465)
74 2dgk_A GAD-beta, GADB, glutama 99.9 1.5E-25 5.2E-30 234.7 30.5 364 62-463 26-435 (452)
75 3fdb_A Beta C-S lyase, putativ 99.9 4.5E-26 1.5E-30 232.4 25.8 333 76-460 23-374 (377)
76 3jtx_A Aminotransferase; NP_28 99.9 5.5E-26 1.9E-30 233.4 26.5 355 55-459 4-395 (396)
77 2c0r_A PSAT, phosphoserine ami 99.9 1.1E-26 3.8E-31 235.9 20.6 340 77-460 4-359 (362)
78 3a2b_A Serine palmitoyltransfe 99.9 2.3E-26 7.7E-31 236.7 23.1 333 77-461 44-391 (398)
79 3ke3_A Putative serine-pyruvat 99.9 2.6E-26 8.9E-31 235.0 23.0 320 120-462 33-376 (379)
80 3e77_A Phosphoserine aminotran 99.9 1.8E-26 6.1E-31 234.1 21.1 336 83-461 19-374 (377)
81 2o1b_A Aminotransferase, class 99.9 2E-26 6.9E-31 237.8 21.9 360 54-460 23-401 (404)
82 3mc6_A Sphingosine-1-phosphate 99.9 5E-26 1.7E-30 241.3 25.2 329 89-463 77-438 (497)
83 2zc0_A Alanine glyoxylate tran 99.9 3.5E-25 1.2E-29 228.4 30.5 339 77-461 35-403 (407)
84 1b9h_A AHBA synthase, protein 99.9 6.7E-26 2.3E-30 232.3 24.8 322 88-460 15-386 (388)
85 3dyd_A Tyrosine aminotransfera 99.9 1E-25 3.5E-30 234.2 26.4 339 77-461 55-423 (427)
86 1qz9_A Kynureninase; kynurenin 99.9 6.3E-26 2.2E-30 234.5 24.6 340 78-461 29-401 (416)
87 3aow_A Putative uncharacterize 99.9 2.7E-25 9.3E-30 232.5 29.4 372 47-461 48-444 (448)
88 2zyj_A Alpha-aminodipate amino 99.9 8.1E-26 2.8E-30 232.5 24.6 337 75-461 31-392 (397)
89 3a9z_A Selenocysteine lyase; P 99.9 7.1E-26 2.4E-30 235.5 24.2 349 77-461 18-427 (432)
90 3m5u_A Phosphoserine aminotran 99.9 5.6E-26 1.9E-30 229.7 22.3 337 77-461 5-359 (361)
91 3b46_A Aminotransferase BNA3; 99.9 1.1E-25 3.8E-30 235.4 24.0 352 60-457 33-442 (447)
92 3e2y_A Kynurenine-oxoglutarate 99.9 9.8E-26 3.4E-30 232.7 23.0 343 76-457 23-408 (410)
93 3ju7_A Putative PLP-dependent 99.9 5.3E-26 1.8E-30 232.4 20.7 333 79-461 5-374 (377)
94 3hdo_A Histidinol-phosphate am 99.9 8.8E-25 3E-29 221.8 29.5 316 76-460 26-353 (360)
95 3qm2_A Phosphoserine aminotran 99.9 6.4E-27 2.2E-31 238.7 12.8 342 78-461 28-384 (386)
96 3qgu_A LL-diaminopimelate amin 99.9 3E-25 1E-29 232.2 24.9 341 76-460 69-438 (449)
97 2bwn_A 5-aminolevulinate synth 99.9 5.9E-25 2E-29 226.3 26.5 332 78-460 48-398 (401)
98 3frk_A QDTB; aminotransferase, 99.9 1.1E-26 3.8E-31 236.9 12.9 327 80-460 7-366 (373)
99 3uwc_A Nucleotide-sugar aminot 99.9 5.5E-26 1.9E-30 231.6 18.0 330 77-461 7-370 (374)
100 1wyu_B Glycine dehydrogenase s 99.9 1.2E-24 4.1E-29 229.2 28.8 363 63-461 49-440 (474)
101 3mad_A Sphingosine-1-phosphate 99.9 9.5E-25 3.2E-29 232.5 28.2 307 116-464 133-471 (514)
102 1iay_A ACC synthase 2, 1-amino 99.9 7.3E-25 2.5E-29 227.7 26.2 345 77-460 37-425 (428)
103 1c4k_A Protein (ornithine deca 99.9 9.4E-25 3.2E-29 238.8 28.1 307 126-462 177-566 (730)
104 2oga_A Transaminase; PLP-depen 99.9 3.7E-25 1.3E-29 227.9 23.6 331 77-461 31-395 (399)
105 3ezs_A Aminotransferase ASPB; 99.9 1E-24 3.6E-29 222.3 26.7 327 77-460 24-373 (376)
106 2fnu_A Aminotransferase; prote 99.9 9.1E-26 3.1E-30 229.9 18.7 325 84-461 7-371 (375)
107 3piu_A 1-aminocyclopropane-1-c 99.9 2E-24 6.7E-29 225.0 29.1 347 78-462 40-432 (435)
108 1vp4_A Aminotransferase, putat 99.9 3.7E-25 1.3E-29 229.9 23.2 342 75-462 42-418 (425)
109 1w23_A Phosphoserine aminotran 99.9 9.8E-26 3.4E-30 228.4 17.4 337 77-460 3-358 (360)
110 1jg8_A L-ALLO-threonine aldola 99.9 5.3E-25 1.8E-29 222.0 22.6 325 77-460 4-344 (347)
111 3if2_A Aminotransferase; YP_26 99.9 1.8E-24 6.2E-29 225.8 27.2 357 76-462 31-440 (444)
112 1o69_A Aminotransferase; struc 99.9 2.2E-24 7.5E-29 221.8 27.0 323 85-461 7-386 (394)
113 1mdo_A ARNB aminotransferase; 99.9 1.2E-24 4.1E-29 223.2 24.7 328 78-461 10-385 (393)
114 3nyt_A Aminotransferase WBPE; 99.9 7.5E-26 2.6E-30 230.4 14.9 321 79-458 5-360 (367)
115 3rq1_A Aminotransferase class 99.9 2.9E-24 9.9E-29 222.4 26.7 329 77-461 39-414 (418)
116 2c81_A Glutamine-2-deoxy-scyll 99.9 9.4E-25 3.2E-29 226.3 22.9 334 84-461 10-413 (418)
117 1bw0_A TAT, protein (tyrosine 99.9 5.5E-24 1.9E-28 220.1 28.6 341 76-461 33-412 (416)
118 1v72_A Aldolase; PLP-dependent 99.9 1.6E-24 5.6E-29 218.8 23.4 323 77-461 8-352 (356)
119 3vp6_A Glutamate decarboxylase 99.9 2.2E-24 7.6E-29 229.0 24.4 322 114-460 127-503 (511)
120 3ftb_A Histidinol-phosphate am 99.9 1.6E-23 5.6E-28 212.1 29.6 317 76-460 26-359 (361)
121 2r2n_A Kynurenine/alpha-aminoa 99.9 2.3E-23 7.7E-28 216.4 31.0 309 118-460 78-422 (425)
122 3ez1_A Aminotransferase MOCR f 99.9 1E-23 3.5E-28 218.7 27.0 355 56-462 6-415 (423)
123 3hvy_A Cystathionine beta-lyas 99.9 1.3E-24 4.4E-29 224.5 19.8 281 59-382 15-325 (427)
124 3ei9_A LL-diaminopimelate amin 99.9 4.1E-24 1.4E-28 222.3 23.3 348 77-459 57-425 (432)
125 1svv_A Threonine aldolase; str 99.9 5.4E-24 1.8E-28 215.1 23.5 321 78-460 15-356 (359)
126 2po3_A 4-dehydrase; external a 99.9 5.6E-24 1.9E-28 220.9 24.1 330 80-463 20-387 (424)
127 3g7q_A Valine-pyruvate aminotr 99.9 3.7E-24 1.3E-28 221.3 22.6 353 76-462 31-413 (417)
128 1fg7_A Histidinol phosphate am 99.9 9.9E-24 3.4E-28 213.9 25.2 311 77-457 30-353 (356)
129 3b8x_A WBDK, pyridoxamine 5-ph 99.9 2E-23 7E-28 214.1 27.6 332 81-455 6-389 (390)
130 3tcm_A Alanine aminotransferas 99.9 1.1E-23 3.6E-28 223.4 25.8 333 88-462 107-494 (500)
131 1lc5_A COBD, L-threonine-O-3-p 99.9 2.1E-23 7E-28 212.0 26.7 319 77-461 25-359 (364)
132 2vyc_A Biodegradative arginine 99.9 1.1E-23 3.9E-28 232.2 26.2 301 126-462 209-605 (755)
133 3t18_A Aminotransferase class 99.9 1.3E-23 4.5E-28 217.1 25.2 327 76-460 37-408 (413)
134 2x5f_A Aspartate_tyrosine_phen 99.9 4.2E-24 1.4E-28 222.1 21.2 335 76-461 47-428 (430)
135 2z67_A O-phosphoseryl-tRNA(SEC 99.9 2.3E-24 7.7E-29 226.0 18.6 338 83-459 87-455 (456)
136 4e1o_A HDC, histidine decarbox 99.9 7.3E-24 2.5E-28 223.6 21.5 349 83-461 86-477 (481)
137 3op7_A Aminotransferase class 99.9 3.7E-23 1.3E-27 210.8 25.9 295 118-461 63-370 (375)
138 2aeu_A Hypothetical protein MJ 99.9 4.8E-23 1.7E-27 210.3 26.5 322 77-462 29-371 (374)
139 3asa_A LL-diaminopimelate amin 99.9 1.6E-23 5.3E-28 215.8 22.6 336 76-461 33-392 (400)
140 3d6k_A Putative aminotransfera 99.9 2.8E-23 9.5E-28 215.5 23.9 356 55-461 12-417 (422)
141 3k40_A Aromatic-L-amino-acid d 99.9 1.2E-23 4.2E-28 221.4 21.5 325 114-462 105-471 (475)
142 3ppl_A Aspartate aminotransfer 99.9 6.2E-23 2.1E-27 213.2 25.9 351 61-462 19-420 (427)
143 3ihj_A Alanine aminotransferas 99.9 6.5E-23 2.2E-27 217.1 26.3 335 88-462 102-493 (498)
144 1wyu_A Glycine dehydrogenase ( 99.9 2.4E-23 8.1E-28 217.2 21.6 305 118-459 104-437 (438)
145 3pj0_A LMO0305 protein; struct 99.9 5.4E-24 1.9E-28 215.6 16.1 331 74-458 11-358 (359)
146 2fyf_A PSAT, phosphoserine ami 99.9 4.5E-23 1.5E-27 212.2 22.8 339 76-460 39-396 (398)
147 2x3l_A ORN/Lys/Arg decarboxyla 99.9 5.5E-24 1.9E-28 222.3 15.5 285 126-461 61-352 (446)
148 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 4.5E-23 1.6E-27 214.9 22.1 335 84-460 37-434 (437)
149 3b1d_A Betac-S lyase; HET: PLP 99.8 6.3E-26 2.2E-30 233.0 0.0 338 77-460 32-391 (392)
150 3fkd_A L-threonine-O-3-phospha 99.9 1.8E-22 6.2E-27 203.8 25.1 312 76-460 15-340 (350)
151 3i16_A Aluminum resistance pro 99.9 2.7E-23 9.3E-28 214.5 18.8 280 61-382 19-325 (427)
152 4f4e_A Aromatic-amino-acid ami 99.9 5.6E-23 1.9E-27 213.0 21.2 352 54-459 25-419 (420)
153 2okj_A Glutamate decarboxylase 99.9 1.8E-22 6.2E-27 214.3 25.2 319 115-460 125-500 (504)
154 2qma_A Diaminobutyrate-pyruvat 99.9 2.3E-22 8E-27 213.1 25.6 343 86-460 110-494 (497)
155 2ez2_A Beta-tyrosinase, tyrosi 99.9 6.9E-22 2.3E-26 207.0 27.7 335 78-464 44-433 (456)
156 2jis_A Cysteine sulfinic acid 99.9 1.5E-22 5.3E-27 215.4 23.0 318 114-460 140-513 (515)
157 1js3_A DDC;, DOPA decarboxylas 99.9 7.2E-23 2.5E-27 216.4 19.6 341 89-462 87-474 (486)
158 1uu1_A Histidinol-phosphate am 99.9 2.1E-22 7E-27 202.3 21.8 304 77-458 20-334 (335)
159 3lws_A Aromatic amino acid bet 99.9 1E-22 3.5E-27 206.1 19.3 330 79-459 13-356 (357)
160 7aat_A Aspartate aminotransfer 99.9 3E-22 1E-26 206.0 22.5 345 63-459 14-400 (401)
161 3ruy_A Ornithine aminotransfer 99.9 1.1E-22 3.9E-27 208.6 18.7 313 88-459 53-391 (392)
162 3fsl_A Aromatic-amino-acid ami 99.9 4.3E-22 1.5E-26 204.4 22.0 329 77-458 27-396 (397)
163 2eh6_A Acoat, acetylornithine 99.9 1.7E-21 5.8E-26 198.4 26.0 318 78-458 30-374 (375)
164 1gc0_A Methionine gamma-lyase; 99.9 1.5E-21 5.1E-26 200.9 25.6 325 79-458 30-397 (398)
165 3f6t_A Aspartate aminotransfer 99.9 3.9E-22 1.3E-26 212.8 22.0 353 79-462 106-525 (533)
166 1ax4_A Tryptophanase; tryptoph 99.9 7.5E-22 2.6E-26 207.3 23.8 329 90-464 55-443 (467)
167 2rfv_A Methionine gamma-lyase; 99.9 2.2E-22 7.6E-27 207.1 18.7 284 126-458 68-396 (398)
168 3jzl_A Putative cystathionine 99.9 1.9E-22 6.3E-27 207.6 17.5 310 63-411 7-339 (409)
169 1pff_A Methionine gamma-lyase; 99.9 3.6E-22 1.2E-26 200.0 19.1 283 128-458 4-330 (331)
170 3k7y_A Aspartate aminotransfer 99.9 2.4E-21 8.2E-26 199.4 25.6 346 56-460 7-403 (405)
171 1yaa_A Aspartate aminotransfer 99.9 5.6E-22 1.9E-26 204.8 20.9 329 76-460 29-409 (412)
172 3n75_A LDC, lysine decarboxyla 99.9 1.1E-21 3.9E-26 212.8 23.8 293 127-462 200-560 (715)
173 1ajs_A Aspartate aminotransfer 99.9 9.3E-22 3.2E-26 203.1 21.6 351 57-461 9-410 (412)
174 4eu1_A Mitochondrial aspartate 99.9 1E-21 3.4E-26 202.8 21.5 349 49-459 12-408 (409)
175 1vef_A Acetylornithine/acetyl- 99.9 1.4E-21 4.7E-26 200.7 22.2 322 78-459 47-394 (395)
176 1s0a_A Adenosylmethionine-8-am 99.9 3.7E-20 1.3E-24 192.3 30.0 335 78-460 45-422 (429)
177 3meb_A Aspartate aminotransfer 99.9 8.9E-21 3E-25 198.2 25.4 347 57-460 28-442 (448)
178 2q7w_A Aspartate aminotransfer 99.9 1.9E-21 6.3E-26 199.6 19.8 327 76-458 26-395 (396)
179 3ht4_A Aluminum resistance pro 99.9 6.5E-22 2.2E-26 205.1 16.2 286 60-381 10-313 (431)
180 1qgn_A Protein (cystathionine 99.9 7.8E-21 2.7E-25 197.6 24.0 288 118-460 114-443 (445)
181 2oqx_A Tryptophanase; lyase, p 99.9 2E-21 6.9E-26 204.0 19.8 342 78-462 43-442 (467)
182 2zy4_A L-aspartate beta-decarb 99.9 2.4E-21 8.3E-26 206.9 20.5 339 78-463 106-523 (546)
183 2ay1_A Aroat, aromatic amino a 99.9 1.8E-21 6.1E-26 199.7 18.8 326 76-458 26-392 (394)
184 2cb1_A O-acetyl homoserine sul 99.9 4E-20 1.4E-24 191.2 28.7 300 118-457 56-411 (412)
185 2oat_A Ornithine aminotransfer 99.9 1.2E-20 4E-25 196.8 24.4 327 77-460 77-437 (439)
186 4adb_A Succinylornithine trans 99.9 4.7E-20 1.6E-24 189.8 27.5 317 88-462 56-400 (406)
187 1z7d_A Ornithine aminotransfer 99.9 3.8E-20 1.3E-24 192.6 26.9 323 77-461 66-428 (433)
188 2eo5_A 419AA long hypothetical 99.9 1.4E-20 4.9E-25 194.9 23.6 328 77-461 43-417 (419)
189 1sff_A 4-aminobutyrate aminotr 99.9 1.5E-20 5.2E-25 194.8 23.4 331 87-461 57-423 (426)
190 1cs1_A CGS, protein (cystathio 99.9 2.6E-20 9.1E-25 190.7 24.8 289 118-458 52-383 (386)
191 1e5e_A MGL, methionine gamma-l 99.9 2.2E-20 7.4E-25 192.6 23.6 287 118-462 62-395 (404)
192 3i4j_A Aminotransferase, class 99.9 1E-19 3.4E-24 189.1 27.9 342 78-461 31-427 (430)
193 3ndn_A O-succinylhomoserine su 99.9 1.6E-20 5.6E-25 193.9 21.0 288 118-459 81-413 (414)
194 3cog_A Cystathionine gamma-lya 99.9 1.9E-20 6.5E-25 193.0 20.8 288 118-459 67-399 (403)
195 2ord_A Acoat, acetylornithine 99.9 4.8E-20 1.7E-24 189.3 23.0 316 78-460 42-395 (397)
196 2fq6_A Cystathionine beta-lyas 99.9 3.7E-20 1.3E-24 191.2 22.1 288 117-457 81-413 (415)
197 3qhx_A Cystathionine gamma-syn 99.9 6.2E-20 2.1E-24 188.4 23.7 287 118-455 66-391 (392)
198 2pb2_A Acetylornithine/succiny 99.8 8.3E-20 2.8E-24 189.2 23.6 327 77-461 58-417 (420)
199 3ri6_A O-acetylhomoserine sulf 99.8 3.3E-20 1.1E-24 192.2 20.5 299 117-459 81-429 (430)
200 1n8p_A Cystathionine gamma-lya 99.8 4.3E-20 1.5E-24 189.6 21.1 285 127-458 60-391 (393)
201 4h51_A Aspartate aminotransfer 99.8 3.8E-20 1.3E-24 190.7 19.9 347 63-461 31-416 (420)
202 3a8u_X Omega-amino acid--pyruv 99.8 1.8E-19 6.3E-24 188.2 24.9 326 88-461 67-446 (449)
203 3gju_A Putative aminotransfera 99.8 6.9E-19 2.3E-23 184.5 29.3 341 77-462 52-456 (460)
204 3nx3_A Acoat, acetylornithine 99.8 5.7E-19 1.9E-23 181.2 27.1 323 77-460 37-393 (395)
205 3dxv_A Alpha-amino-epsilon-cap 99.8 8.3E-19 2.8E-23 182.6 26.6 337 77-462 44-425 (439)
206 1zod_A DGD, 2,2-dialkylglycine 99.8 2.7E-19 9.2E-24 186.0 22.2 328 88-461 60-431 (433)
207 1ibj_A CBL, cystathionine beta 99.8 2.4E-19 8.4E-24 187.6 21.7 285 124-460 135-460 (464)
208 3n5m_A Adenosylmethionine-8-am 99.8 4.1E-18 1.4E-22 178.1 31.0 340 78-460 51-450 (452)
209 3acz_A Methionine gamma-lyase; 99.8 3.2E-19 1.1E-23 182.9 21.3 248 118-416 59-330 (389)
210 4a6r_A Omega transaminase; tra 99.8 4.4E-19 1.5E-23 186.0 22.4 337 78-462 52-449 (459)
211 3tfu_A Adenosylmethionine-8-am 99.8 3.9E-18 1.4E-22 178.5 28.9 334 77-461 76-452 (457)
212 3bwn_A AT1G70560, L-tryptophan 99.8 1E-19 3.6E-24 186.7 15.9 322 76-460 22-385 (391)
213 2ctz_A O-acetyl-L-homoserine s 99.8 1.1E-18 3.6E-23 180.9 21.4 158 118-301 58-221 (421)
214 3i5t_A Aminotransferase; pyrid 99.8 9.6E-18 3.3E-22 176.4 28.5 328 88-463 71-455 (476)
215 3hmu_A Aminotransferase, class 99.8 1.6E-18 5.5E-23 182.1 21.9 326 88-462 72-452 (472)
216 3dod_A Adenosylmethionine-8-am 99.8 1.9E-17 6.4E-22 173.0 29.5 326 88-462 61-443 (448)
217 3l44_A Glutamate-1-semialdehyd 99.8 4.4E-17 1.5E-21 169.3 31.7 327 76-462 55-430 (434)
218 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 1.7E-19 5.7E-24 185.0 12.3 312 118-461 94-442 (450)
219 3nmy_A Xometc, cystathionine g 99.8 4.9E-18 1.7E-22 174.5 22.9 214 117-375 66-285 (400)
220 3fq8_A Glutamate-1-semialdehyd 99.8 4.3E-17 1.5E-21 169.0 30.0 323 77-460 53-425 (427)
221 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 2.4E-18 8.1E-23 174.1 17.9 307 123-463 118-462 (501)
222 2hox_A ALLIIN lyase 1; cystein 99.8 3.3E-19 1.1E-23 185.0 12.1 322 77-460 57-423 (427)
223 2cjg_A L-lysine-epsilon aminot 99.8 6.4E-18 2.2E-22 176.6 21.6 320 88-461 71-447 (449)
224 2epj_A Glutamate-1-semialdehyd 99.8 1.8E-17 6.2E-22 172.3 24.5 326 77-461 57-430 (434)
225 3k28_A Glutamate-1-semialdehyd 99.8 1.3E-16 4.3E-21 165.7 30.2 323 76-461 53-426 (429)
226 2e7u_A Glutamate-1-semialdehyd 99.8 5E-17 1.7E-21 168.4 24.9 322 77-458 53-423 (424)
227 3oks_A 4-aminobutyrate transam 99.8 1.4E-16 4.7E-21 166.5 26.8 338 78-460 63-449 (451)
228 2cy8_A D-phgat, D-phenylglycin 99.8 1.5E-16 5E-21 166.4 27.0 322 77-462 58-435 (453)
229 4ffc_A 4-aminobutyrate aminotr 99.8 8.7E-17 3E-21 168.1 24.7 339 78-462 66-449 (453)
230 4e77_A Glutamate-1-semialdehyd 99.7 4.1E-16 1.4E-20 161.8 27.8 325 77-460 54-427 (429)
231 1ohv_A 4-aminobutyrate aminotr 99.7 4.5E-16 1.5E-20 163.5 16.7 322 88-460 80-469 (472)
232 2yky_A Beta-transaminase; tran 99.4 1.4E-16 4.7E-21 166.1 0.0 323 77-461 101-459 (465)
233 4ao9_A Beta-phenylalanine amin 99.5 4.6E-12 1.6E-16 131.1 27.9 303 88-462 104-446 (454)
234 4atq_A 4-aminobutyrate transam 99.5 5.5E-11 1.9E-15 123.5 30.9 331 88-461 81-454 (456)
235 4e3q_A Pyruvate transaminase; 99.3 1.2E-10 4.1E-15 121.4 22.7 330 77-461 68-467 (473)
236 4a0g_A Adenosylmethionine-8-am 99.2 4.1E-10 1.4E-14 125.2 17.2 210 215-460 577-826 (831)
237 1t57_A Conserved protein MTH16 48.7 1.4E+02 0.0048 26.2 10.5 50 115-173 31-80 (206)
238 1vc3_B L-aspartate-alpha-decar 45.5 12 0.00039 28.9 2.3 15 221-235 74-88 (96)
239 3plx_B Aspartate 1-decarboxyla 45.5 7.4 0.00025 30.3 1.3 14 222-235 74-87 (102)
240 2yxb_A Coenzyme B12-dependent 41.9 42 0.0014 28.5 5.7 42 211-252 55-96 (161)
241 1pqh_A Aspartate 1-decarboxyla 39.5 28 0.00096 28.7 3.9 15 221-235 115-129 (143)
242 1uhe_A Aspartate 1-decarboxyla 39.3 26 0.0009 26.9 3.5 14 222-235 73-86 (97)
243 1vp8_A Hypothetical protein AF 39.0 2E+02 0.0068 25.2 11.8 51 115-173 23-73 (201)
244 1vli_A Spore coat polysacchari 38.1 1.7E+02 0.0057 28.8 9.9 87 212-302 168-267 (385)
245 1ybx_A Conserved hypothetical 31.4 76 0.0026 26.4 5.4 42 445-510 100-142 (143)
246 1iv0_A Hypothetical protein; r 30.8 86 0.003 24.1 5.4 52 210-261 36-94 (98)
247 1y80_A Predicted cobalamin bin 30.7 90 0.0031 27.5 6.4 50 211-260 125-178 (210)
248 1ccw_A Protein (glutamate muta 30.7 70 0.0024 26.2 5.2 42 211-252 40-81 (137)
249 1xrs_B D-lysine 5,6-aminomutas 28.4 1.2E+02 0.0041 28.0 6.8 50 211-260 166-222 (262)
250 4gqr_A Pancreatic alpha-amylas 26.0 29 0.00098 35.1 2.4 28 234-261 71-98 (496)
251 3v7e_A Ribosome-associated pro 24.6 73 0.0025 23.5 3.8 43 214-258 16-58 (82)
252 3ghf_A Septum site-determining 24.1 1.4E+02 0.0048 23.8 5.7 46 212-257 25-78 (120)
253 2wuj_A Septum site-determining 23.7 67 0.0023 22.0 3.1 21 441-461 18-38 (57)
254 1vhx_A Putative holliday junct 23.2 90 0.0031 26.1 4.5 53 210-262 40-100 (150)
255 2ab1_A Hypothetical protein; H 23.0 1.6E+02 0.0055 23.6 5.8 48 211-259 48-95 (122)
256 2lbw_A H/ACA ribonucleoprotein 22.4 1.4E+02 0.0049 23.8 5.4 45 214-260 25-71 (121)
257 1vr6_A Phospho-2-dehydro-3-deo 22.0 1E+02 0.0035 29.9 5.2 54 212-265 224-287 (350)
258 3j21_Z 50S ribosomal protein L 21.2 1.3E+02 0.0046 22.9 4.9 42 214-257 20-61 (99)
259 3bzy_B ESCU; auto cleavage pro 21.1 46 0.0016 24.9 2.0 21 241-261 28-48 (83)
260 3ezx_A MMCP 1, monomethylamine 20.9 1.2E+02 0.0042 26.9 5.2 49 211-259 129-183 (215)
261 1ht6_A AMY1, alpha-amylase iso 20.5 48 0.0016 32.8 2.7 28 234-261 63-90 (405)
262 2c45_A Aspartate 1-decarboxyla 20.5 59 0.002 26.7 2.6 14 222-235 99-112 (139)
263 2xzm_U Ribosomal protein L7AE 20.2 1.7E+02 0.0057 23.6 5.4 46 214-260 29-75 (126)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=1.6e-101 Score=775.15 Aligned_cols=457 Identities=62% Similarity=1.049 Sum_probs=394.7
Q ss_pred hhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~ 133 (519)
+..|++.||+++++|++|..||+++|+||||||++|+.|++|+++.|+|+|+|||||.|||+||+++|++|.+|++++++
T Consensus 32 ~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~ 111 (490)
T 3ou5_A 32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHH
T ss_pred ccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHH
Confidence 57799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCC
Q 010058 134 AFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYID 213 (519)
Q Consensus 134 ~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD 213 (519)
+||+++++|+||||++||++||++++.+|++|||+|+.+++++|||++||+......++++|..++.++|++|++++.||
T Consensus 112 lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~ID 191 (490)
T 3ou5_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID 191 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEEC
T ss_pred HhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999877666889999999999999999999999
Q ss_pred HHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCC
Q 010058 214 YEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP 293 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gp 293 (519)
+|++++.+.++|||+|+++.|+|++.+|++++++||++.|++|++|+||.+|+++.+++++|++++|++|+||||+|+||
T Consensus 192 yd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGP 271 (490)
T 3ou5_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 271 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSC
T ss_pred HHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEeeccccccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 294 RGAMIFFRKGVKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 294 rgG~i~~~~~~~~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
|||+|+++++.+... ..|....+++.++|++++||+.||+|++|.|+|+++|++++..++|++|++|+.+|++.|++.|
T Consensus 272 rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L 351 (490)
T 3ou5_A 272 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADAL 351 (490)
T ss_dssp SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH
Confidence 999999998754322 4455566688999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHH
Q 010058 373 LERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVA 452 (519)
Q Consensus 373 ~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~ 452 (519)
.+.|+++++++|++|++++|+++.++++.++++.|+++||.+|+|.+|+|.++..+++||||++++|+|||+++||++++
T Consensus 352 ~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA 431 (490)
T 3ou5_A 352 LERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVV 431 (490)
T ss_dssp HHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHH
T ss_pred HhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCCc
Q 010058 453 EFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEK 512 (519)
Q Consensus 453 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~ 512 (519)
++|.+++...++++++. + +++||+..+..+.+..+.++++|++|.+||++||+|+||+
T Consensus 432 ~~I~~~l~~~~~~~~~~-~-kl~~f~~~~~~~~~~~~~i~~lr~~V~~l~~~FP~pg~d~ 489 (490)
T 3ou5_A 432 DFIDEGVNIGLEVKSKT-A-KLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 489 (490)
T ss_dssp HHHHHHHHHHHHHHHTC-C-SHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSC
T ss_pred HHHHHHHHhhhhhhhhh-h-hhHHHHHHHhcCcccHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999988764 3 6889987765432224678999999999999999999985
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=1.6e-71 Score=583.86 Aligned_cols=456 Identities=62% Similarity=1.049 Sum_probs=371.7
Q ss_pred hhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010058 55 APLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA 134 (519)
Q Consensus 55 ~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~ 134 (519)
..|+++||++++.|++|..||++.|+|++|+|++|+.|++|+.+.+.++|++|||++|||+|++.++++|++++++++++
T Consensus 33 ~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l 112 (490)
T 2a7v_A 33 ESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA 112 (490)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHH
T ss_pred chhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCH
Q 010058 135 FQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDY 214 (519)
Q Consensus 135 ~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~ 214 (519)
||+++++|+++|+++||+.||.+++.++++|||+|+++++.|++|++|++......+.+.|..++.++++++++++.+|+
T Consensus 113 ~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~ 192 (490)
T 2a7v_A 113 FDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDY 192 (490)
T ss_dssp TTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCH
T ss_pred cCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCH
Confidence 99998877778889999999999999999999999999999999998887543334567787778888888877899999
Q ss_pred HHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCC
Q 010058 215 EQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 294 (519)
Q Consensus 215 d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gpr 294 (519)
|++++++.+++||+|+++.++||+..|+++|++||++||++|++|++|++|++..+..+.|++++|++++|+||+|+||+
T Consensus 193 d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~ 272 (490)
T 2a7v_A 193 NQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGAR 272 (490)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCS
T ss_pred HHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCcccc
Confidence 99999998778999999888899999999999999999999999999999999888888888899999999999999999
Q ss_pred cceEEeecccccc-cccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 010058 295 GAMIFFRKGVKEI-NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 295 gG~i~~~~~~~~~-~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (519)
||+|+++++.... +..|....+++.++++...+++.+|+|+++.++|+++|+.++..++++++.+++.+|+++|++.|.
T Consensus 273 GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~ 352 (490)
T 2a7v_A 273 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALL 352 (490)
T ss_dssp CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999853110 001111223567788888899999999999999999999988877889999999999999999999
Q ss_pred hcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 374 ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 374 ~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
+.|++++.+++++|++++++.+.++++.++.+.|+++||.++++.+|++.++..+++||||++++|+||++++||+++++
T Consensus 353 ~~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~ 432 (490)
T 2a7v_A 353 ERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVD 432 (490)
T ss_dssp HTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHH
T ss_pred HcCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHH
Confidence 99999988777889999999887888999999999999999999999998888899999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCCc
Q 010058 454 FFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEK 512 (519)
Q Consensus 454 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~ 512 (519)
+|.+++....+++++. ++++||++.+.++++..+.+.++|++|.+|+++||+|+|++
T Consensus 433 ~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 489 (490)
T 2a7v_A 433 FIDEGVNIGLEVKSKT--AKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 489 (490)
T ss_dssp HHHHHHHHHHHHHHHC--CSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSC
T ss_pred HHHHHHHhhhhhhhhh--chhhHHHhhhccChhhHHHHHHHHHHHHHHHHhCCCCCcCC
Confidence 9999999998887665 46899998887632212468899999999999999999864
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=1.4e-65 Score=543.05 Aligned_cols=465 Identities=58% Similarity=0.984 Sum_probs=403.9
Q ss_pred chhhhhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHH
Q 010058 48 PWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 127 (519)
Q Consensus 48 ~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~ 127 (519)
++..+++++++.+||+++..+.+|..||++.|+|++++|++|+.|++++.+.+.++|++|||++++|++++.++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~ 95 (483)
T 1rv3_A 16 SHEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLC 95 (483)
T ss_dssp THHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHH
T ss_pred hHHHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHH
Confidence 35666777899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC
Q 010058 128 QKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE 207 (519)
Q Consensus 128 ~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~ 207 (519)
+++++++||+++++|+++|+++||+.+|.+++.++++|||+|++++++|++|++|++..+...+.+.|..++.+++++++
T Consensus 96 ~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~ 175 (483)
T 1rv3_A 96 QKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP 175 (483)
T ss_dssp HHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT
T ss_pred HHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc
Confidence 99999999999877767899999999999889999999999999999999999999877666777778778888888887
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC
Q 010058 208 STGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 287 (519)
Q Consensus 208 ~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~ 287 (519)
+++.+|+|+|++++++.+||+|+++++|++...|+++|+++|+++|++|++|++|+.|+++.+..++|++++|++++|+|
T Consensus 176 ~~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~ 255 (483)
T 1rv3_A 176 DTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTH 255 (483)
T ss_dssp TTCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESS
T ss_pred CCCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCc
Confidence 78999999999999855999999987777788999999999999999999999999999998888888888999999999
Q ss_pred CcccCCCcceEEeeccccccccc-CcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 010058 288 KSLRGPRGAMIFFRKGVKEINKQ-GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSS 366 (519)
Q Consensus 288 K~l~GprgG~i~~~~~~~~~~~~-g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~ 366 (519)
|+|+|||||+|+++++....... |....|++.++++...+++.+|+|+.+.++++++|++++...+++++++++.++++
T Consensus 256 K~l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~ 335 (483)
T 1rv3_A 256 KTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCR 335 (483)
T ss_dssp GGGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred ccCCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHH
Confidence 99999999999999863211111 22222345666777778888999999999999999999888889999999999999
Q ss_pred HHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHH
Q 010058 367 KFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 367 ~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
+|.+.|.+.|++++.+++++|++++++...++++.++.+.|++.||.++++++||+.++..+++||||++.+++||++++
T Consensus 336 ~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~e 415 (483)
T 1rv3_A 336 ALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEK 415 (483)
T ss_dssp HHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHH
T ss_pred HHHHHHHhcCCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHH
Confidence 99999999999998876677899999987778889999999999999998888987656678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCC-CCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCCCCc
Q 010058 447 DFEKVAEFFDAAVKLALKIKGDT-KGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVGFEK 512 (519)
Q Consensus 447 di~~l~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~ 512 (519)
|+++++++|.+++....+++... +.+++++|++.+.++......++++|++|.+||++||+|+|++
T Consensus 416 di~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (483)
T 1rv3_A 416 DFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLPG 482 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTTSCCCSSSC
T ss_pred HHHHHHHHHHHHHHhccchhccccccchhhHHHHhhccccchhHHHHHHHHHHHHHHHhCCCCCcCC
Confidence 99999999999998755444322 1236889998886521111368899999999999999999863
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-51 Score=430.40 Aligned_cols=415 Identities=46% Similarity=0.754 Sum_probs=349.9
Q ss_pred hhhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 010058 51 NQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 130 (519)
Q Consensus 51 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~ 130 (519)
..+...+..++|+++..+.++.+|+.+.|+|++++|+++|.|++++.+.+.+.|..|||+.+||.++...+.+++.++++
T Consensus 20 ~~~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~ 99 (447)
T 3h7f_A 20 GSMSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDR 99 (447)
T ss_dssp CGGGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred hhhHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHH
Confidence 34567788999999999999999999999999999999999999999999888988999999999999999999888899
Q ss_pred HHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCC
Q 010058 131 ALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG 210 (519)
Q Consensus 131 ~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~ 210 (519)
+++++|++. ++++++||+.|+.+++.++++|||+|++++++|++|+.++. .+.+.|..+..++++++++++
T Consensus 100 la~~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~ 170 (447)
T 3h7f_A 100 AKALFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATH 170 (447)
T ss_dssp HHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHSSEEEEECCCTTTC
T ss_pred HHHHcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh-----hhhhcCCeeEEEEcCcCcccC
Confidence 999999986 45668899889999999999999999999999988776655 233445556667777777778
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcc
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 290 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l 290 (519)
.+|++++++++.+.+|++|+++.+++|...++++|+++|+++|++||+|++|+.|++..+..+.+++++|++++|+||+|
T Consensus 171 ~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l 250 (447)
T 3h7f_A 171 LIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTL 250 (447)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGG
T ss_pred CcCHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCC
Confidence 99999999999766899999986666777799999999999999999999999998877777777778999999999999
Q ss_pred cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Q 010058 291 RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 291 ~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~ 370 (519)
+||+||++++++ ++.+.++...+++.+++++...++++++++......+++++.+++.++++++.+
T Consensus 251 ~G~~gG~i~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 316 (447)
T 3h7f_A 251 GGGRSGLIVGKQ--------------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIAD 316 (447)
T ss_dssp CCCSCEEEEECG--------------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECH--------------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 999999999988 566666666677788899999899999999888777889999999999999999
Q ss_pred HHHhc-----CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCC
Q 010058 371 SLLER-----GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFV 444 (519)
Q Consensus 371 ~L~~~-----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~ 444 (519)
.|.+. |++++.++++++++++++...+.+...+.+.|+++||.++++.+|++. ++..++++|++++..+++|++
T Consensus 317 ~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~ 396 (447)
T 3h7f_A 317 RLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFG 396 (447)
T ss_dssp HHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCC
T ss_pred HHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCC
Confidence 99988 999887656778888988777778888999999999999988888864 566788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCC-CCCCc
Q 010058 445 EEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPT-VGFEK 512 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~-~~~~~ 512 (519)
++|+++++++|.+++.... + . . +++++++|.+|++.||+ |++++
T Consensus 397 ~eei~~~~~~l~~~l~~~~-------------------~--~--~-~~~~~~~v~~~~~~~~~~~~~~~ 441 (447)
T 3h7f_A 397 DTEFTEVADIIATALATGS-------------------S--V--D-VSALKDRATRLARAFPLYDGLEE 441 (447)
T ss_dssp HHHHHHHHHHHHHHHHSGG-------------------G--C--C-HHHHHHHHHHHHHHSCSSTTGGG
T ss_pred HHHHHHHHHHHHHHHhccC-------------------c--h--h-HHHHHHHHHHHHHhCCCCCCchh
Confidence 9999999999999987421 1 1 2 67999999999999999 66653
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=6.8e-48 Score=399.77 Aligned_cols=408 Identities=45% Similarity=0.760 Sum_probs=341.7
Q ss_pred hhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc
Q 010058 56 PLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAF 135 (519)
Q Consensus 56 ~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~ 135 (519)
.++.++|++++.+.+|..++.+.|+|++++|++++.|++++.+.+.+.|..+||+.++|++....+.+++.+++++++++
T Consensus 5 ~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 84 (417)
T 3n0l_A 5 SLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLF 84 (417)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 57889999999999998888899999999999999999999999977788899999999999999999999999999999
Q ss_pred CCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHH
Q 010058 136 QLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYE 215 (519)
Q Consensus 136 g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d 215 (519)
|+++ .+|+++||+.++..++.++++|||+|++++++|+++..++. .+...|..+..++++++ +++.+|++
T Consensus 85 g~~~----~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~~ 154 (417)
T 3n0l_A 85 NCKF----ANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGA-----KVSSSGKMYESCFYGVE-LDGRIDYE 154 (417)
T ss_dssp TCSE----EECCCSSHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCHH
T ss_pred CCCC----cceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhh-----hhhhhcceeeeEeccCC-CCCCcCHH
Confidence 9976 35999999779998999999999999999999988776555 33445566667777777 67889999
Q ss_pred HHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc
Q 010058 216 QLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG 295 (519)
Q Consensus 216 ~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg 295 (519)
++++++++.+|++|+++++++|...|+++|+++|++||+++|+|++|+.|....+..+.++.++|++++|+||+|+||+|
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~ 234 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG 234 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSC
T ss_pred HHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCe
Confidence 99999985599999998777899999999999999999999999999999887777666666789999999999999999
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
|+++++++ ++.+.+.....++..++++...++++++++......+++++.+++.++++++.+.|.+.
T Consensus 235 G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (417)
T 3n0l_A 235 GIIMTNDE-------------ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR 301 (417)
T ss_dssp EEEEESCH-------------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEECCH-------------HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999843 56666666666777788899999998888888666778999999999999999999999
Q ss_pred CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 376 GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
|+.++.+++..+++++++...+.+...+.+.|.++||.++....|+.. ++..++++|++++..++++++++|++++++.
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~ 381 (417)
T 3n0l_A 302 KFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNY 381 (417)
T ss_dssp TCEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred CceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHH
Confidence 998877555677888888766778889999999999999877777765 5566789999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCCC
Q 010058 455 FDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTVG 509 (519)
Q Consensus 455 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 509 (519)
|.+++.... + ...+++++++|.+|+.+||+|+
T Consensus 382 l~~~l~~~~----------------------~-~~~~~~~~~~v~~~~~~~~~~~ 413 (417)
T 3n0l_A 382 IADILDDVN----------------------N-EKLQENIKQELKKLASNFIIYE 413 (417)
T ss_dssp HHHHHHTTT----------------------C-HHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHhccc----------------------c-hhhHHHHHHHHHHHHhcCCCcc
Confidence 999987421 1 2568899999999999999954
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=100.00 E-value=8.9e-46 Score=384.05 Aligned_cols=408 Identities=46% Similarity=0.779 Sum_probs=321.1
Q ss_pred hhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC
Q 010058 57 LEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ 136 (519)
Q Consensus 57 l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g 136 (519)
++.++|++++.+.++.+++.+.+.+++++|+++|.|.+++.+.+.+.+..|||+.++|.+..+.+.+++.+++++++++|
T Consensus 11 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 90 (420)
T 3gbx_A 11 IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG 90 (420)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC
Confidence 78899999999999988888899999999999999999999999777878899998988888788888889999999999
Q ss_pred CCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHH
Q 010058 137 LDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQ 216 (519)
Q Consensus 137 ~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~ 216 (519)
+++ .+|++++|+.++..++.++++|||+|++.++.|+++..++. .+...|..+..++++.+ +++.+|+++
T Consensus 91 ~~~----~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~~~ 160 (420)
T 3gbx_A 91 ADY----ANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGS-----PVNFSGKLYNIVPYGID-ESGKIDYDE 160 (420)
T ss_dssp CSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-TTCSCCHHH
T ss_pred CCC----ceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccch-----hhhhcccceeEEeccCC-ccCCcCHHH
Confidence 976 35878999889998999999999999999998888765554 23344555666667666 568899999
Q ss_pred HHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcc
Q 010058 217 LEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA 296 (519)
Q Consensus 217 l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG 296 (519)
+++++++.++++|+++.+++|...|+++|+++|++||+++|+|++|..|....+..+.++..+|++++|+||+++||+||
T Consensus 161 l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gg 240 (420)
T 3gbx_A 161 MAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 240 (420)
T ss_dssp HHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSCE
T ss_pred HHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCce
Confidence 99999876799999987778888999999999999999999999998888766666655667899999999999999999
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG 376 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 376 (519)
++++++... ++.+.++...+++.+++++...+++++.++......+++++.+++.++++++.+.|.+.|
T Consensus 241 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 309 (420)
T 3gbx_A 241 LILAKGGDE-----------ELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRG 309 (420)
T ss_dssp EEEESSCCH-----------HHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCcH-----------HHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999987211 455555555667667888888888888888777667788999999999999999999999
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
+.++.++...+++++.+...+.+...+.+.|.++||.++....|+.. .+..++++||+++..++++++++|+++++++|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l 389 (420)
T 3gbx_A 310 YKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWM 389 (420)
T ss_dssp CEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred CeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHH
Confidence 99877545567888887665667888999999999999876666654 45566789999999999999999999999999
Q ss_pred HHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCC
Q 010058 456 DAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTV 508 (519)
Q Consensus 456 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~ 508 (519)
++++.... + ..++++++++|.+|+++||++
T Consensus 390 ~~~l~~~~----------------------~-~~~~~~~~~~~~~~~~~~~~~ 419 (420)
T 3gbx_A 390 CDVLDNIN----------------------D-EATIERVKAKVLDICARFPVY 419 (420)
T ss_dssp HHHHHTTT----------------------C-HHHHHHHHHHHHHHHHHSCSC
T ss_pred HHHHhCcc----------------------c-chhHHHHHHHHHHHHHhCCCC
Confidence 99886420 1 256889999999999999985
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=5.2e-45 Score=378.86 Aligned_cols=417 Identities=43% Similarity=0.677 Sum_probs=320.8
Q ss_pred hhhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 010058 51 NQLNAPLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKR 130 (519)
Q Consensus 51 ~~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~ 130 (519)
.++.+.+..++|+++..+..+..++.+.++|.+++|+++|.|++++.+.+.+.|..|+++.++|.+....+.+++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (425)
T 3ecd_A 7 PFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIER 86 (425)
T ss_dssp HHHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHH
T ss_pred hHHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHH
Confidence 35667789999999999999888888899999999999999999999999777878899888888877777788888899
Q ss_pred HHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCC
Q 010058 131 ALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG 210 (519)
Q Consensus 131 ~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~ 210 (519)
+++++|++. +.|++++|+.|+..++.++++|||+|++.++.|++++..+. .....|..++.++++++++++
T Consensus 87 ~~~~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~ 157 (425)
T 3ecd_A 87 VKRLFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDTM 157 (425)
T ss_dssp HHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTTS
T ss_pred HHHHhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCcccC
Confidence 999999886 34667888889998999999999999999988877544433 223446656667777776778
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcc
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL 290 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l 290 (519)
.+|++++++++++.++++|+++++++|...++++|+++|++||+++|+|++|+.|....+....+++.+|++++|+||+|
T Consensus 158 ~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l 237 (425)
T 3ecd_A 158 LIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTL 237 (425)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGG
T ss_pred ccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCccc
Confidence 99999999999866899999986677999999999999999999999999999888776655555556899999999999
Q ss_pred cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Q 010058 291 RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 291 ~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~ 370 (519)
+||++|+++++++ ++.+.+....+++..++++...+++++.++......+++++.+++.++++++.+
T Consensus 238 ~g~~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (425)
T 3ecd_A 238 RGPRGGFVLTNDE-------------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGD 304 (425)
T ss_dssp CCCSCEEEEESCH-------------HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCH-------------HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 9999999999863 455656555666666788888888888888777667788999999999999999
Q ss_pred HHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHH
Q 010058 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 371 ~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
.|.+.|+.++.++...+++++.+.+.+.+...+.+.|.++||.++....|+.. .+..++++|++++.+++++++++|++
T Consensus 305 ~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~ 384 (425)
T 3ecd_A 305 VLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFR 384 (425)
T ss_dssp HHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHH
T ss_pred HHHhCCCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHH
Confidence 99999998876545567778887665667888999999999999876667654 45556789999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCC
Q 010058 450 KVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPT 507 (519)
Q Consensus 450 ~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~ 507 (519)
++++.|.++++...+.. .. + ...++.++++|.+|++.||+
T Consensus 385 ~~~~~l~~~l~~~~~~~---------------~~--~-~~~~~~~~~~~~~~~~~~~~ 424 (425)
T 3ecd_A 385 EVGRLILEVFEALRTNP---------------EG--D-HATEQRVRREIFALCERFPI 424 (425)
T ss_dssp HHHHHHHHHHHHHHHCT---------------TC--C-HHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHhcccccc---------------cc--C-chhHHHHHHHHHHHHhcCCC
Confidence 99999999987531100 00 1 25678999999999999998
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=100.00 E-value=1.4e-40 Score=343.40 Aligned_cols=402 Identities=45% Similarity=0.779 Sum_probs=314.9
Q ss_pred hhhhhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010058 55 APLEEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA 134 (519)
Q Consensus 55 ~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~ 134 (519)
+.+.+++|+++..+..+..++.+.+.+.+++++.++.|++++.+.+.+.+..||++.++|.+.....++++.++++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~ 81 (405)
T 2vi8_A 2 KYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQL 81 (405)
T ss_dssp CSHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 34677899999999998888777788888999999999999999987656667888777877777888998899999999
Q ss_pred cCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCH
Q 010058 135 FQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDY 214 (519)
Q Consensus 135 ~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~ 214 (519)
+|+++ ..|.+++|+.++..++.++++|||+|+++++.|+++...+. .+...|..+..++++++++++.+|+
T Consensus 82 ~g~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~ 152 (405)
T 2vi8_A 82 FGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDY 152 (405)
T ss_dssp HTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-----TTSHHHHHSEEEEECBCTTTCSBCH
T ss_pred hCCCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-----hhhhccceeEEEecccccccCCcCH
Confidence 99985 34667999669998999999999999999988777654222 1122343334555566555688999
Q ss_pred HHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCC
Q 010058 215 EQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR 294 (519)
Q Consensus 215 d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gpr 294 (519)
+++++++++.+|++|+++++++|...++++|+++|+++|+++|+|++|..|....+..+.++..+|++++|+||+++||.
T Consensus 153 ~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~ 232 (405)
T 2vi8_A 153 DDVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPR 232 (405)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCS
T ss_pred HHHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCC
Confidence 99999998668999998877888888999999999999999999999987766555544444468999999999998888
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
||++++++ ++.+.+.....++..++++...++++.++++.....++++..+++.++++++.+.|++
T Consensus 233 gG~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 298 (405)
T 2vi8_A 233 GGMILCQE--------------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN 298 (405)
T ss_dssp CEEEEECH--------------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcH--------------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999986 5555555544455567778888888888888766667789999999999999999999
Q ss_pred cCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 375 RGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 375 ~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
.|++++.+....+++++.+...+.+..++.+.|.++||.++....|.+. ++..++++|++++.++++.++++|++++++
T Consensus 299 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~ 378 (405)
T 2vi8_A 299 EGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAA 378 (405)
T ss_dssp TTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHH
T ss_pred CCCeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHH
Confidence 9998876433456777777544557788888998899999854433222 233457899999887666677999999999
Q ss_pred HHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHH
Q 010058 454 FFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYA 502 (519)
Q Consensus 454 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 502 (519)
.|.+++.... + + +.+..+|++|.+|+
T Consensus 379 ~l~~~~~~~~-------------------~--~--~~~~~~~~~~~~~~ 404 (405)
T 2vi8_A 379 IIGLVLKNVG-------------------S--E--QALEEARQRVAALT 404 (405)
T ss_dssp HHHHHHTCTT-------------------C--H--HHHHHHHHHHHHHH
T ss_pred HHHHHHhccc-------------------c--c--ccHHHHHHHHHHhh
Confidence 9999875210 1 1 34677999999886
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=2e-40 Score=342.52 Aligned_cols=402 Identities=47% Similarity=0.774 Sum_probs=314.5
Q ss_pred hhcCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC
Q 010058 58 EEIDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL 137 (519)
Q Consensus 58 ~~~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~ 137 (519)
...||++++.+.++..++.+.|++.+++++.++.|.+++.+.+.+.+..+||+.+++.+......+++.+++++++++|+
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~ 84 (407)
T 2dkj_A 5 LKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA 84 (407)
T ss_dssp -CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC
Confidence 35689999999999888889999999999999999999999987645556777766666666667887888999999999
Q ss_pred CCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHH
Q 010058 138 DPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQL 217 (519)
Q Consensus 138 ~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l 217 (519)
++ ++|.+++|+.|+..++.++++|||+|+++++.|+++..+.. .+...|..+..++++++++++.+|++++
T Consensus 85 ~~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l 155 (407)
T 2dkj_A 85 AW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGS-----RVNFSGKLYKVVSYGVRPDTELIDLEEV 155 (407)
T ss_dssp SE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECCCTTTSSCCHHHH
T ss_pred Cc----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHH-----HHHhcCceEEEEecCCCcccCccCHHHH
Confidence 86 35888999889888999999999999999988877643222 2233454445566655555688999999
Q ss_pred HHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcce
Q 010058 218 EKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAM 297 (519)
Q Consensus 218 ~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~ 297 (519)
++++++.++++|+++.+++|...|+++|.++|+++|+++|+|++|..|....+....++...|++++|+||+|+|+++|+
T Consensus 156 ~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~ 235 (407)
T 2dkj_A 156 RRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGL 235 (407)
T ss_dssp HHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEE
T ss_pred HHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceE
Confidence 99998558999999756678888999999999999999999999988877666544444468999999999999999999
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY 377 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 377 (519)
++++++ ++.+.+.....++..++++...++++.++++.....++++..+++.++++++.+.|++.|+
T Consensus 236 ~~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 302 (407)
T 2dkj_A 236 ILSNDP-------------ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGY 302 (407)
T ss_dssp EEESCH-------------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEECCH-------------HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999832 5555555544455557778877777778888765667789999999999999999999999
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
+++.++...+++++.+...+.+..++.+.|.++||.++....|.+. .+..++++|++++.+++.+.+++|++++++.|+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~ 382 (407)
T 2dkj_A 303 RIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELID 382 (407)
T ss_dssp EEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHH
T ss_pred eeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHH
Confidence 8875433456777777544556788888898999999854433221 223457899998876544455899999999999
Q ss_pred HHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCCC
Q 010058 457 AAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPTV 508 (519)
Q Consensus 457 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~ 508 (519)
+++.. . + .+.++++|.+|..+||+|
T Consensus 383 ~~~~~-~----------------------~----~~~~~~~~~~~~~~~~~~ 407 (407)
T 2dkj_A 383 RALLE-G----------------------P----SEALREEVRRLALAHPMP 407 (407)
T ss_dssp HHHHH-C----------------------C----CHHHHHHHHHHHHTSCCC
T ss_pred HHHhc-C----------------------c----hHHHHHHHHHHHHhcCCC
Confidence 98863 1 0 135888999999999974
No 10
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=1e-29 Score=259.71 Aligned_cols=345 Identities=15% Similarity=0.077 Sum_probs=243.7
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQ 157 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~ 157 (519)
+.+.++..++++.|++++.+.+.+.+ ......+.+.+++++++++|++++. .+|++++|++ ++.
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~~la~~~~~~~~~--~~v~~~~g~t~al~- 68 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVGFT------------SKEFVEALAYSLKGLRYVMGASKNY--QPLIIPGGGTSAME- 68 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCCTT------------SHHHHHHHHHHHHHHHHHHTCCTTS--EEEEEESCHHHHHH-
T ss_pred eeccCCCCCCCHHHHHHhhccccccc------------cHHHHHHHHHHHHHHHHHhCCCCCC--cEEEEcCCcHHHHH-
Confidence 56788888899999999887654311 1223455566779999999998631 2588888877 888
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA- 235 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn- 235 (519)
++.++++|||+|++++++|.+.. ... .+...|..+..++ ++ +++.+|+++++++++++++++|+++ ++|
T Consensus 69 ~~~~~~~~gd~vi~~~~~~~~~~--~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np 139 (384)
T 3zrp_A 69 SVTSLLKPNDKILVVSNGVFGDR--WEQ----IFKRYPVNVKVLR--PS-PGDYVKPGEVEEEVRKSEYKLVALTHVETS 139 (384)
T ss_dssp HGGGGCCTTCEEEEECSSHHHHH--HHH----HHTTSSCEEEEEC--CS-TTCCCCHHHHHHHHHHSCEEEEEEESEETT
T ss_pred HHHhhcCCCCEEEEecCCcchHH--HHH----HHHHcCCcEEEec--CC-CCCCCCHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 88999999999999986654321 110 1122354455554 44 3578999999999987689999988 556
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--cc-ccccC
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KE-INKQG 311 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~~-~~~~g 311 (519)
+|...|+++|.++|++||+++|+|++|..|....+.... ++|++++|+||++.|+.| |+++++++. .+ .+...
T Consensus 140 tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~ 216 (384)
T 3zrp_A 140 TGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEW---NVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSI 216 (384)
T ss_dssp TTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTT---TCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCS
T ss_pred CceECcHHHHHHHHHhcCCEEEEECcccccCcccccccc---CCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCC
Confidence 899999999999999999999999999877665444333 589999999999987766 999998743 11 11000
Q ss_pred cchhh---hHHHHhhhc-c-cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCC-C-
Q 010058 312 QEVMY---AYEDKINQA-V-FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGG-T- 384 (519)
Q Consensus 312 ~~~~~---~~~~~i~~~-~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~- 384 (519)
..... .+....... . .....|+++...++++.++++.+...++++..+++.++++++.+.|++.|++++.+. .
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 296 (384)
T 3zrp_A 217 AGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPES 296 (384)
T ss_dssp CCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGG
T ss_pred CcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccc
Confidence 00000 000000010 0 111225788888888888888776656889999999999999999999988876543 1
Q ss_pred -CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 385 -ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 385 -~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
..+++++.+. +.+..++.+.|.+.||.++ ||...+. +.+|++++..++ ++|++++++.|++++...
T Consensus 297 ~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~----~g~~~~~--~~iRi~~~~~~~----~e~i~~~~~~l~~~l~~~ 363 (384)
T 3zrp_A 297 YSNTVTGVILK--VADPQKVLAGTVNEGVEFA----PGVHPAF--KYFRIGHMGWVT----PNDAIIAISVIERTLRKL 363 (384)
T ss_dssp BCSSEEEEECS--SSCHHHHHHHHHTTTCCCE----ECCCTTC--CEEEEECCSSCC----HHHHHHHHHHHHHHHHHH
T ss_pred cCccEEEEECC--CCCHHHHHHHHHHCCEEEe----cCCCCCc--CEEEEeccccCC----HHHHHHHHHHHHHHHHHc
Confidence 2344445543 3578888898988899987 4442222 789999888887 899999999999999764
No 11
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.97 E-value=1.5e-29 Score=257.89 Aligned_cols=342 Identities=16% Similarity=0.169 Sum_probs=244.5
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL 162 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al 162 (519)
+..++++.|++++.+.+.+.+ ++|+..| ........+.+.+++++++++|++++ +|++++|++ ++..++.++
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~----~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 8 SAKPVDERILEAMLPYMTESF--GNPSSVH-SYGFKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTSC--CCTTCSS-HHHHHHHHHHHHHHHHHHHHTTCTTE----EEEEESSHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHhhc--CCCcccc-hHHHHHHHHHHHHHHHHHHHcCCCcC----eEEEECCchHHHHHHHHHh
Confidence 445778999999999987744 5665432 22234456666778999999999873 588888887 888888888
Q ss_pred c----CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-c
Q 010058 163 L----KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-Y 236 (519)
Q Consensus 163 l----~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~ 236 (519)
+ +|||+|++++.+|+++....... ...|..+..++ .+ +++.+|++++++++++ ++++|+++ ++| +
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~-----~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~npt 151 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINPAKFL-----QKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEI 151 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHH-----HHTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTT
T ss_pred hhhhcCCCCEEEECCCCcHHHHHHHHHH-----HhcCCEEEEec--cC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCc
Confidence 7 99999999998887765432211 11244444444 44 4578999999999987 89999888 556 8
Q ss_pred cccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-ccCcch
Q 010058 237 ARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQGQEV 314 (519)
Q Consensus 237 g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~~g~~~ 314 (519)
|...|+++|.++|+++|+ +|+|++|..|....+.... ++|++++|+||+ .|+.| |+++++++..+.+ ..|+..
T Consensus 152 G~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~~~~~ 226 (382)
T 4hvk_A 152 GTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKI---GADMLTISSNDI-YGPKGVGALWIRKEAKLQPVILGGGQ 226 (382)
T ss_dssp CBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHH---TCSEEEEESGGG-TSCTTCEEEEEETTCCCCCSSCSSCT
T ss_pred eeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhc---CCCEEEEeHHHh-cCCCceEEEEEcCccCcCcccccCCC
Confidence 999999999999999999 9999999877654333222 579999999996 46665 8998887543333 222111
Q ss_pred hhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCC--cceeee
Q 010058 315 MYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTE--NHLVLV 391 (519)
Q Consensus 315 ~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~--~~~~~v 391 (519)
. .....++++...++++.++++... .++++..+++.++++++.+.|+++ |+.+..+... .+++.+
T Consensus 227 ~-----------~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T 4hvk_A 227 E-----------NGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNV 294 (382)
T ss_dssp G-----------GGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEE
T ss_pred c-----------CccccCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEE
Confidence 0 011235678888888888877554 467889999999999999999987 8877654321 123333
Q ss_pred eccCCCCcHHHHHHhhcccCeEEcccccCCCCC--C------C------CCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 392 NLRNKGIDGSRVEKVLESVHIAANKNTVPGDVS--A------M------VPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 392 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~--~------~------~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
.+ .+.+..++.+.|.+.||.++.....+... + . ..+.||++++..++ ++|++++++.|++
T Consensus 295 ~~--~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t----~e~i~~~~~~l~~ 368 (382)
T 4hvk_A 295 RF--SYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNT----DEDVDRLLEVLPG 368 (382)
T ss_dssp EE--TTCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCC----HHHHHHHHHHHHH
T ss_pred EE--CCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCC----HHHHHHHHHHHHH
Confidence 33 35678889999999999997321111000 0 0 05789999998888 8999999999999
Q ss_pred HHHHHhh
Q 010058 458 AVKLALK 464 (519)
Q Consensus 458 ~l~~~~~ 464 (519)
+++...+
T Consensus 369 ~~~~~~~ 375 (382)
T 4hvk_A 369 VIERLRS 375 (382)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9876543
No 12
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=9.7e-29 Score=255.50 Aligned_cols=349 Identities=14% Similarity=0.125 Sum_probs=241.9
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC-cHHHH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS-GSPAN 155 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s-Gs~a~ 155 (519)
..+.+.++...+++.+++++.+.... +|. ....++...+++++++++|++++. .+.+++ |+.++
T Consensus 11 ~~~~~~p~p~~~~~~v~~a~~~~~~~----------~~~--~~~~~~~~~l~~~la~~~g~~~~~---~~~~~~s~t~al 75 (416)
T 3isl_A 11 LRTIMTPGPVEVDPRVLRVMSTPVVG----------QFD--PAFTGIMNETMEMLRELFQTKNRW---AYPIDGTSRAGI 75 (416)
T ss_dssp CCEECSSSSCCCCHHHHHHTTSCCCC----------TTS--HHHHHHHHHHHHHHHHHTTCCCSE---EEEEESCHHHHH
T ss_pred cceeecCCCcCcCHHHHHHhcccCCC----------Ccc--HHHHHHHHHHHHHHHHHhCCCCCc---EEEecCcHHHHH
Confidence 34667888888899998887652211 111 223455667779999999998642 343554 44588
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
..++.++++|||+|+++++.|.++... ..+...|..+..++ ++ +++.+|++++++++++.++++|+++ ++
T Consensus 76 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~------~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 146 (416)
T 3isl_A 76 EAVLASVIEPEDDVLIPIYGRFGYLLT------EIAERYGANVHMLE--CE-WGTVFDPEDIIREIKKVKPKIVAMVHGE 146 (416)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHHHH------HHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHHhcCCCCEEEEecCCcccHHHH------HHHHhcCCeeEEEe--cC-CCCCCCHHHHHHHHhhCCCcEEEEEccC
Confidence 889999999999999998766542110 01223355555555 44 3468999999999985589999998 56
Q ss_pred c-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--cccc-
Q 010058 235 A-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINK- 309 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~- 309 (519)
| +|...|+++|.++|++||+++|+|++|..|....+.... ++|++++|+||++.|+.| |+++++++.. +.+.
T Consensus 147 nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~ 223 (416)
T 3isl_A 147 TSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEW---KIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARK 223 (416)
T ss_dssp TTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTT---TCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC-
T ss_pred CCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhc---CCCEEEecCccccCCCCCeEEEEECHHHHHHhhccc
Confidence 6 899999999999999999999999999877665544333 689999999999888877 8998887431 1100
Q ss_pred ---------------cCcc----hhhhHHHHhhh-cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Q 010058 310 ---------------QGQE----VMYAYEDKINQ-AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369 (519)
Q Consensus 310 ---------------~g~~----~~~~~~~~i~~-~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~ 369 (519)
.|+. ...+....... .......++++...++++.++++.....++++..+++.++++++.
T Consensus 224 ~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~ 303 (416)
T 3isl_A 224 KVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALA 303 (416)
T ss_dssp -----------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 0100 00000000000 011112467888888888888887765558899999999999999
Q ss_pred HHHHhcCCEEecCCC--CcceeeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCCCCCCCCeEEeccCccccCCCCHH
Q 010058 370 RSLLERGYDLVSGGT--ENHLVLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 370 ~~L~~~g~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
+.|.+.|+++..+.. ..+++++.+ +.+.+..++.+.|.+. ||.++ ||. .+..++.+|++++.+++ ++
T Consensus 304 ~~L~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~gi~v~----~g~-~~~~~~~iRi~~~~~~~----~~ 373 (416)
T 3isl_A 304 AGIKAMGLRLFGDDSCKMPVVTCVEI-PGGIDGESVRDMLLAQFGIEIA----SSF-GPLAGKIWRIGTMGYSC----RK 373 (416)
T ss_dssp HHHHHTTCCBCSCGGGBCTTEEEEEC-CTTCCHHHHHHHHHHHHCEECB----CCC-STTTTTEEEEECCGGGC----SH
T ss_pred HHHHHcCCEeccCccccCCcEEEEeC-CCCCCHHHHHHHHHHhCCEEEe----cCC-CCCCCCEEEEecccCCC----cH
Confidence 999999888776422 123444444 2356788888888665 99997 443 22346789999977666 45
Q ss_pred H-HHHHHHHHHHHHHHH
Q 010058 447 D-FEKVAEFFDAAVKLA 462 (519)
Q Consensus 447 d-i~~l~~~l~~~l~~~ 462 (519)
| ++++++.|++++...
T Consensus 374 e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 374 ENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 5 999999999998754
No 13
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.97 E-value=1.7e-28 Score=251.01 Aligned_cols=344 Identities=11% Similarity=0.076 Sum_probs=240.4
Q ss_pred eecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeCCcHH-HHHH
Q 010058 80 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSLSGSP-ANFQ 157 (519)
Q Consensus 80 ~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~sGs~-a~~~ 157 (519)
...++...+++.|.+++.+.+.+. |+ .....+.+.+++++++++|++ + .+|.+++|++ |+..
T Consensus 23 l~~~~~~~~~~~v~~a~~~~~~~~----------~~--~~~~~~~~~~~~~la~~~g~~~~----~~v~~~~g~t~a~~~ 86 (386)
T 2dr1_A 23 LFTAGPVACFPEVLEIMKVQMFSH----------RS--KEYRKVHMDTVERLREFLEVEKG----EVLLVPSSGTGIMEA 86 (386)
T ss_dssp ECCSSSCCCCHHHHHHTTSCCCCT----------TS--HHHHHHHHHHHHHHHHHHTCSSS----EEEEESSCHHHHHHH
T ss_pred eecCCCcCCcHHHHHHHhcccccc----------cC--HHHHHHHHHHHHHHHHHhCCCCC----cEEEEeCChHHHHHH
Confidence 345666778999999987765431 22 223567777889999999997 3 3588888877 8998
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-hCCcEEEEc-ccc
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL-FRPKLIVAG-ASA 235 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~-~k~klIi~~-~sn 235 (519)
++.++++|||+|+++++.|.++.... .+...|..+..++ .+ .++.+|++++++++.+ .++++|+++ ++|
T Consensus 87 ~~~~l~~~gd~vl~~~~~~~~~~~~~------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~n 157 (386)
T 2dr1_A 87 SIRNGVSKGGKVLVTIIGAFGKRYKE------VVESNGRKAVVLE--YE-PGKAVKPEDLDDALRKNPDVEAVTITYNET 157 (386)
T ss_dssp HHHHHSCTTCEEEEEESSHHHHHHHH------HHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHCTTCCEEEEESEET
T ss_pred HHHHhhcCCCeEEEEcCCchhHHHHH------HHHHhCCceEEEe--cC-CCCCCCHHHHHHHHhcCCCCcEEEEEeecC
Confidence 99999999999999997776521000 1222344444444 44 3577999999999953 379999988 555
Q ss_pred -ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--ccc-cc
Q 010058 236 -YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EIN-KQ 310 (519)
Q Consensus 236 -~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~-~~ 310 (519)
+|...|+++|.++|+++|+++|+|++|..|....++... ++|++++|+||++++|.| |+++++++.. +.+ ..
T Consensus 158 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~ 234 (386)
T 2dr1_A 158 STGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKW---GLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPE 234 (386)
T ss_dssp TTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTT
T ss_pred CcchhCCHHHHHHHHHHcCCeEEEEccccccCcccccccc---CCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCC
Confidence 788999999999999999999999999877654332222 579999999999988755 9999987421 110 00
Q ss_pred CcchhhhHHHHhhhcc-cCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC--Cc
Q 010058 311 GQEVMYAYEDKINQAV-FPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERGYDLVSGGT--EN 386 (519)
Q Consensus 311 g~~~~~~~~~~i~~~~-~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~--~~ 386 (519)
.+. ..++...+.... .....++++...++++..+++..... ++++..+++.++++++.+.|++.|++++.+.. ..
T Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 313 (386)
T 2dr1_A 235 RGW-YFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESP 313 (386)
T ss_dssp CCS-TTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCS
T ss_pred Cce-EEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCC
Confidence 000 001110111100 01223567777888888888876543 47888999999999999999998887765421 23
Q ss_pred ceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 387 HLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 387 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+++++.+. .+.+..++.+.|.+.||.++ |+.. +...+.+||+++..++ ++|++++++.|+++++..
T Consensus 314 ~~~~~~~~-~~~~~~~~~~~l~~~gi~v~----~~~~-~~~~~~iRi~~~~~~~----~~~i~~~~~~l~~~~~~~ 379 (386)
T 2dr1_A 314 TITAVLTP-PGIKGDEVYEAMRKRGFELA----KGYG-SVKEKTFRIGHMGYMK----FEDIQEMLDNLREVINEL 379 (386)
T ss_dssp SEEEEECC-TTCCHHHHHHHHHHTTEECE----ECCG-GGTTTEEEEECCSSCC----HHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcC-CCCCHHHHHHHHHHCCeEEe----cCcc-ccCCCEEEEECCCCCC----HHHHHHHHHHHHHHHHHc
Confidence 45556553 24567888888888899997 3331 1235689999988777 899999999999988643
No 14
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.97 E-value=7.4e-29 Score=255.96 Aligned_cols=348 Identities=13% Similarity=0.115 Sum_probs=242.6
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc-HHHHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG-SPANF 156 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG-s~a~~ 156 (519)
.+.+.++...+++.|++++.+.+.+ + + . .....+.+.+++++++++|++.+. .|.+++| +.++.
T Consensus 14 ~~~~~pgp~~~~~~v~~a~~~~~~~-----~-----~-~-~~~~~~~~~~~~~la~~~~~~~~~---~v~~~~sgt~al~ 78 (411)
T 3nnk_A 14 RLLMGPGPINADPRVLRAMSSQLIG-----Q-----Y-D-PAMTHYMNEVMALYRGVFRTENRW---TMLVDGTSRAGIE 78 (411)
T ss_dssp CEEESSSCCCCCHHHHHHHTSCCCC-----T-----T-C-HHHHHHHHHHHHHHHHHHTCCCSE---EEEEESCHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhhccccc-----c-----c-c-HHHHHHHHHHHHHHHHHhCCCCCc---EEEECCCcHHHHH
Confidence 4677888888999999998764322 1 1 1 222345566779999999998642 3666655 55888
Q ss_pred HHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc
Q 010058 157 QVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA 235 (519)
Q Consensus 157 ~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn 235 (519)
.++.++++|||+|++.++.|.+.... . .+...|..+..+++ + +++.+|++++++++++.++++|+++ ++|
T Consensus 79 ~~~~~~~~~gd~Vl~~~~~~~~~~~~-~-----~~~~~g~~~~~v~~--~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 149 (411)
T 3nnk_A 79 AILVSAIRPGDKVLVPVFGRFGHLLC-E-----IARRCRAEVHTIEV--P-WGEVFTPDQVEDAVKRIRPRLLLTVQGDT 149 (411)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHHHH-H-----HHHHTTCEEEEEEC--C-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCEEEEecCCchHHHHH-H-----HHHHcCCeEEEEec--C-CCCCCCHHHHHHHHhhCCCeEEEEeCCCC
Confidence 89999999999999999766442100 0 12233544555553 3 4578899999999986689999998 566
Q ss_pred -ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--cc----
Q 010058 236 -YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EI---- 307 (519)
Q Consensus 236 -~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~---- 307 (519)
+|...|+++|+++|++||+++|+|++|..|....+.... ++|++++|+||++.|+.| |+++++++.. +.
T Consensus 150 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~---~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~ 226 (411)
T 3nnk_A 150 STTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVW---GLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKC 226 (411)
T ss_dssp TTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTT---TCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCC
T ss_pred CcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhcc---CCcEEEecCccccCCCCceEEEEECHHHHHHHhhccc
Confidence 889999999999999999999999998877665444333 689999999999888777 9999887431 11
Q ss_pred --c-ccCcc-----------hhhhHHHHhhh-cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 308 --N-KQGQE-----------VMYAYEDKINQ-AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 308 --~-~~g~~-----------~~~~~~~~i~~-~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
+ +.|+. ...+....... .......++++...++++.++++.....++++..+++.++++++.+.|
T Consensus 227 ~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L 306 (411)
T 3nnk_A 227 VEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGI 306 (411)
T ss_dssp CCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 1 11110 00000000000 001112367888888888888887766567899999999999999999
Q ss_pred HhcCCEEecCCC--CcceeeeeccCCCCcHHHHHHhhcc-cCeEEcccccCCCCCCCCCCeEEecc-CccccCCCCHHHH
Q 010058 373 LERGYDLVSGGT--ENHLVLVNLRNKGIDGSRVEKVLES-VHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDF 448 (519)
Q Consensus 373 ~~~g~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRi~~-~~~ttrg~~~~di 448 (519)
++.|+.++.+.. ..++.++.+ +.+.+..++.+.|.+ +||.++. +. .+..++++||++ +..++ ++|+
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~gi~v~~----g~-~~~~~~~iRi~~~~~~~~----~~~i 376 (411)
T 3nnk_A 307 QAMGLETFGDLKHKMNNVLGVVI-PQGINGDQARKLMLEDFGIEIGT----SF-GPLHGKVWRIGTMGYNAR----KDCV 376 (411)
T ss_dssp HHTTCCBCSCGGGBCSSEEEEEC-CTTCCHHHHHHHHHHHHSEEEEE----CC-GGGTTTEEEEECCGGGCS----HHHH
T ss_pred HHcCCEeCCCcccccccEEEEEC-CCCCCHHHHHHHHHHhcCeEEeC----cc-CCCCCCEEEEeCccCcCC----HHHH
Confidence 999888765421 123444444 235678888887765 5999973 32 122356899998 55557 8999
Q ss_pred HHHHHHHHHHHHHH
Q 010058 449 EKVAEFFDAAVKLA 462 (519)
Q Consensus 449 ~~l~~~l~~~l~~~ 462 (519)
+++++.|+++++..
T Consensus 377 ~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 377 MTTLSALEAVLNYL 390 (411)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999998753
No 15
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.97 E-value=6.6e-29 Score=250.76 Aligned_cols=337 Identities=12% Similarity=0.041 Sum_probs=238.4
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQ 157 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~ 157 (519)
+.+.++..++++.|++++.+.+... +++ ........+++++++++|++++ +|++++|++ ++..
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~--------~~~----~~~~~~~~l~~~la~~~g~~~~----~i~~~~g~t~a~~~ 66 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHH--------RTE----AAREVFLKARGLLREAFRTEGE----VLILTGSGTLAMEA 66 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCT--------TSH----HHHHHHHHHHHHHHHHHTCSSE----EEEEESCHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCCc--------cCH----HHHHHHHHHHHHHHHHhCCCCc----eEEEcCchHHHHHH
Confidence 5678888899999999998766421 111 1223334566999999999763 588887777 8998
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA- 235 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn- 235 (519)
++.++++|||+|+++++.|.++. ... .....|..+..++ ++ +++.+|++++++ + ++++|+++ ++|
T Consensus 67 ~~~~~~~~gd~vl~~~~~~~~~~-~~~-----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~---~-~~~~v~~~~~~np 133 (352)
T 1iug_A 67 LVKNLFAPGERVLVPVYGKFSER-FYE-----IALEAGLVVERLD--YP-YGDTPRPEDVAK---E-GYAGLLLVHSETS 133 (352)
T ss_dssp HHHHHCCTTCEEEEEECSHHHHH-HHH-----HHHHTTCEEEEEE--CC-TTCCCCTTTSCC---S-SCSEEEEESEETT
T ss_pred HHHhccCCCCeEEEEeCCchhHH-HHH-----HHHHcCCceEEEe--CC-CCCCCCHHHHhc---c-CCcEEEEEEecCC
Confidence 99999999999999997776653 111 0111244444554 44 346789888876 3 79999888 555
Q ss_pred ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--ccccc
Q 010058 236 YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQ 310 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~~ 310 (519)
+|...|+++|.++|+++ |+++|+|++|..|....++... ++|++++|+||++.||.| |+++++++.. +.+
T Consensus 134 tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~-- 208 (352)
T 1iug_A 134 TGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAM---GVDAAASGSQKGLMCPPGLGFVALSPRALERLKP-- 208 (352)
T ss_dssp TTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGG---TCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCC--
T ss_pred cceecCHHHHHHHHHhhCCCCEEEEECCccccCcceecccc---CeeEEEecCcccccCCCceeEEEECHHHHHHhhC--
Confidence 79999999999999999 9999999999866544332211 579999999999988877 9999887421 000
Q ss_pred CcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceee
Q 010058 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVL 390 (519)
Q Consensus 311 g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 390 (519)
++ ...++...+.........++++...++++.++++..... +++..+++.++++++.+.|++.|+.++.+....++++
T Consensus 209 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 286 (352)
T 1iug_A 209 RG-YYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAA 286 (352)
T ss_dssp CS-STTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEE
T ss_pred CC-ceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEE
Confidence 00 000111111111011223677888888888888876544 7888999999999999999998888765421345566
Q ss_pred eeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 391 VNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 391 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+.+. .+.+..++.+.|.+.||.++ |+. .+...+++||+++..++ ++|++++++.|+++++.
T Consensus 287 ~~~~-~~~~~~~~~~~l~~~gi~v~----~~~-~~~~~~~iRi~~~~~~~----~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 287 FYLP-EGVPYARVKEAFAQRGAVIA----GGQ-GPLKGKVFRLSLMGAYD----RYEALGVAGMFREVLEE 347 (352)
T ss_dssp EECC-TTCCHHHHHHHHHTTTEECE----ECC-GGGTTTEEEECCCSSCC----HHHHHHHHHHHHHHHHH
T ss_pred EEcC-CCCCHHHHHHHHHHCCEEEE----eCC-CccCCCEEEEEccccCC----HHHHHHHHHHHHHHHHH
Confidence 6653 25677888888888899997 333 12235789999998877 89999999999998864
No 16
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=5.1e-29 Score=254.15 Aligned_cols=346 Identities=16% Similarity=0.107 Sum_probs=236.5
Q ss_pred ccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 76 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 76 ~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
....++.+++..+++.|++++.+.+... + . .....+.+.+++++++++|++.+. ..+.+++|++ +
T Consensus 18 ~~~~~~~pgp~~~~~~v~~a~~~~~~~~----------~-~-~~~~~~~~~~~~~la~~~g~~~~~--~~i~~~~ggt~a 83 (376)
T 3f0h_A 18 QGMLNFTVGPVMSSEEVRAIGAEQVPYF----------R-T-TEFSSTMLENEKFMLEYAKAPEGS--KAVFMTCSSTGS 83 (376)
T ss_dssp SSCEECSSSSCCCCHHHHHHHTSCCCCC----------S-S-HHHHHHHHHHHHHHHHHHTCCTTC--EEEEESSCHHHH
T ss_pred cCceeecCCCCCCcHHHHHHhcCCCCCC----------C-C-HHHHHHHHHHHHHHHHHhCCCCCc--eEEEEcCChhHH
Confidence 3568899999999999999997754321 1 1 223355566779999999997532 1355576655 8
Q ss_pred HHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-c
Q 010058 155 NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-A 233 (519)
Q Consensus 155 ~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~ 233 (519)
+..++.++++|||+|+++++.+.++... . .....|..+..++ .+ +++.+|++++++.+.+ ++++|+++ +
T Consensus 84 l~~~~~~~~~~gd~vi~~~~~~~~~~~~-~-----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~ 153 (376)
T 3f0h_A 84 MEAVVMNCFTKKDKVLVIDGGSFGHRFV-Q-----LCEIHEIPYVALK--LE-HGKKLTKEKLYEYDNQ-NFTGLLVNVD 153 (376)
T ss_dssp HHHHHHHHCCTTCCEEEEESSHHHHHHH-H-----HHHHTTCCEEEEE--CC-TTCCCCHHHHHTTTTS-CCCEEEEESE
T ss_pred HHHHHHhccCCCCeEEEEeCChhhHHHH-H-----HHHHcCCceEEEe--CC-CCCCCCHHHHHHhhcc-CceEEEEecc
Confidence 8889999999999999987544333211 0 1112244444554 33 3578999999997765 89999998 5
Q ss_pred cc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--ccc-
Q 010058 234 SA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EIN- 308 (519)
Q Consensus 234 sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~- 308 (519)
+| +|...|+++|+++|+++|+++|+|++|..+....+.... ++|++++|+||+++|+.| |+++++++.. +.+
T Consensus 154 ~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~ 230 (376)
T 3f0h_A 154 ETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNEC---GADVMITGSQKVLACPPGISVIVLAPRGVERVEKS 230 (376)
T ss_dssp ETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTC
T ss_pred cCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccccccc---CccEEEecCcccccCCCceEEEEECHHHHHHhhcC
Confidence 55 899999999999999999999999998876544322211 479999999999986666 8888887421 111
Q ss_pred ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcc
Q 010058 309 KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENH 387 (519)
Q Consensus 309 ~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 387 (519)
..+.. ..+...........+...+++...++++.++++.+... ++++..++..++++++.+.|++.|+.+..+.....
T Consensus 231 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 309 (376)
T 3f0h_A 231 KVRTM-YFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANG 309 (376)
T ss_dssp CCCCS-TTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTT
T ss_pred CCCce-eecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCce
Confidence 00000 00111000011111223466677777788888876554 57889999999999999999998887765432223
Q ss_pred eeeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 388 LVLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 388 ~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+..+ .+.+.+..++.+.|.+. ||.++ |+.. +...+.+|++++..++ ++|++++++.|+++++
T Consensus 310 ~~~~--~~~~~~~~~l~~~l~~~~gi~v~----~g~~-~~~~~~lRis~~~~~t----~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 310 VTSV--HPTTANAYDIFLKLKDEYGIWIC----PNGG-EMKDTIFRVGHIGALT----HEDNTTLVNAFKDLQK 372 (376)
T ss_dssp EEEE--EESSSCHHHHHHHHHHHSSEECE----ECCG-GGTTTCEEEECCSSCC----HHHHHHHHHHHHHHHH
T ss_pred EEEE--eCCCCCHHHHHHHHHHhCCEEEe----cCcc-ccCCCEEEEecCCCCC----HHHHHHHHHHHHHHHH
Confidence 3222 24456788888888776 99997 3321 2235689999988777 8999999999999885
No 17
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.97 E-value=2.4e-28 Score=250.68 Aligned_cols=335 Identities=12% Similarity=0.137 Sum_probs=241.3
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
..+.+.++...+++.|++++.+.+.+. | ..........+++++++++|++++ .+|.+++|++ |+
T Consensus 19 ~~~~~~~g~~~~~~~v~~a~~~~~~~~----------~--~~~~~~~~~~l~~~la~~~g~~~~---~~i~~~~g~t~a~ 83 (393)
T 2huf_A 19 NKLLMGPGPSNAPQRVLDAMSRPILGH----------L--HPETLKIMDDIKEGVRYLFQTNNI---ATFCLSASGHGGM 83 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTSCCCCT----------T--SHHHHHHHHHHHHHHHHHHTCCCS---EEEEESSCHHHHH
T ss_pred CeEEecCCCCCCCHHHHHHHHhhhccC----------C--CHHHHHHHHHHHHHHHHHhCCCCC---cEEEEcCcHHHHH
Confidence 346777887788999999988765431 1 122344556677999999999763 1588888777 99
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
..++.++++|||+|+++++.|.++. ... .+...|..+..++ ++ +++.+|++++++++++.++++|+++ ++
T Consensus 84 ~~~~~~~~~~gd~vl~~~~~~~~~~--~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 154 (393)
T 2huf_A 84 EATLCNLLEDGDVILIGHTGHWGDR--SAD----MATRYGADVRVVK--SK-VGQSLSLDEIRDALLIHKPSVLFLTQGD 154 (393)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHH--HHH----HHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHHHhCCCCEEEEECCCcchHH--HHH----HHHHcCCeeEEEe--CC-CCCCCCHHHHHHHHhccCCcEEEEEccC
Confidence 9899999999999999997775531 110 0111244444554 44 3468999999999976579999988 55
Q ss_pred c-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCc
Q 010058 235 A-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQ 312 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~ 312 (519)
| +|...|+++|.++|+++|+++|+|++|..|....++... ++|++++|+||++.|+.| |+++++++
T Consensus 155 nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~sK~l~g~~G~G~~~~~~~--------- 222 (393)
T 2huf_A 155 SSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRW---EIDAMYTGSQKVLGAPPGITPVSFSHR--------- 222 (393)
T ss_dssp TTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCSEEECCSSSTTCCCSSCEEEEECHH---------
T ss_pred CCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhc---CccEEEECCCcccccCCCeEEEEECHH---------
Confidence 5 899999999999999999999999998876554333222 589999999999888777 99999873
Q ss_pred chhhhHHHHhhhc-------c---------c------CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Q 010058 313 EVMYAYEDKINQA-------V---------F------PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 313 ~~~~~~~~~i~~~-------~---------~------~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~ 370 (519)
+.+.+... . + ....++++...++++.++++.....++++..+++.++++++.+
T Consensus 223 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 297 (393)
T 2huf_A 223 -----AVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYR 297 (393)
T ss_dssp -----HHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 33333221 0 1 1123678888888888888876544578889999999999999
Q ss_pred HHHhcCCEEecCCC--CcceeeeeccCCCCcHHHHHHhhcc-cCeEEcccccCCCCCCCCCCeEEeccCcc-ccCCCCHH
Q 010058 371 SLLERGYDLVSGGT--ENHLVLVNLRNKGIDGSRVEKVLES-VHIAANKNTVPGDVSAMVPGGIRMGTPAL-TSRGFVEE 446 (519)
Q Consensus 371 ~L~~~g~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRi~~~~~-ttrg~~~~ 446 (519)
.|.+.|+.++.+.. .++++++.+. .+.+..++.+.|.+ .||.++ |+.. ....+++||+++.+ ++ ++
T Consensus 298 ~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~----~g~~-~~~~~~~Ri~~~~~~~~----~e 367 (393)
T 2huf_A 298 GLQDAGFELYADPKDRLSTVTTIKVP-QGVDWLKAAQYAMKTYLVEIS----GGLG-PTAGQVFRIGLMGQNAT----TE 367 (393)
T ss_dssp HHHHTTCCBSSCGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCEECB----CCCG-GGTTTEEEEECCGGGCS----HH
T ss_pred HHHHcCCeeccCccccCCcEEEEEcC-CCCCHHHHHHHHHHhCCEEEe----cCcc-cccCCEEEEEcccCcCC----HH
Confidence 99998887765421 1334445543 25677788887765 699997 3332 12357899999554 46 78
Q ss_pred HHHHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVKLA 462 (519)
Q Consensus 447 di~~l~~~l~~~l~~~ 462 (519)
|++++++.|+++++..
T Consensus 368 ~i~~~~~~l~~~~~~~ 383 (393)
T 2huf_A 368 RVDRVLQVFQEAVAAV 383 (393)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 9999999999988653
No 18
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.97 E-value=1.5e-28 Score=252.86 Aligned_cols=343 Identities=16% Similarity=0.134 Sum_probs=243.1
Q ss_pred cCeeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL-DPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~-~~~~~~~~V~~~sGs~- 153 (519)
+.+.|..+.+ ++++.|++++.+.+.+.+ ++++...+............+++++++++|. +++ +|.+++|++
T Consensus 23 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~----~v~~~~g~t~ 96 (406)
T 1kmj_A 23 PLAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKMENVRKRASLFINARSAE----ELVFVRGTTE 96 (406)
T ss_dssp ECEECCTTTCCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGG----GEEEESSHHH
T ss_pred ceEEecCCccCCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCC----eEEEeCChhH
Confidence 3577765544 578999999999887633 3333211100011233344566999999998 443 588888886
Q ss_pred HHHHHHHhh----cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 154 ANFQVYTAL----LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 154 a~~~~~~al----l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
|+..++.++ ++|||+|+++++.|.+....... .+...|..+..++ .+ +++.+|++++++++++ ++++|
T Consensus 97 a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~l~~-~~~~v 168 (406)
T 1kmj_A 97 GINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQM----LCARVGAELRVIP--LN-PDGTLQLETLPTLFDE-KTRLL 168 (406)
T ss_dssp HHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHTCEEEEEC--BC-TTSCBCGGGHHHHCCT-TEEEE
T ss_pred HHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHH----HHHhCCCEEEEEe--cC-CCCCcCHHHHHHHhcc-CCeEE
Confidence 998899999 89999999999888776532211 0122344444444 44 3578999999999987 89999
Q ss_pred EEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccc
Q 010058 230 VAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKE 306 (519)
Q Consensus 230 i~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~ 306 (519)
+++ ++| +|...|+++|.++|+++|+++|+|++|..|....++... +.|++++|+||++ ||.| |+++++++
T Consensus 169 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~~-g~~G~G~~~~~~~--- 241 (406)
T 1kmj_A 169 AITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQAL---DCDFYVFSGHKLY-GPTGIGILYVKEA--- 241 (406)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECHH---
T ss_pred EEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCccccc---CCCEEEEEchhcc-CCCCcEEEEEeHH---
Confidence 888 555 789999999999999999999999999876543221111 5799999999988 6776 99999874
Q ss_pred ccccCcchhhhHHHHhhhccc---------------------CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHH
Q 010058 307 INKQGQEVMYAYEDKINQAVF---------------------PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNS 365 (519)
Q Consensus 307 ~~~~g~~~~~~~~~~i~~~~~---------------------~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~ 365 (519)
+.+.+..... ....|+++...++++.++++.+...++++..+++.+++
T Consensus 242 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 310 (406)
T 1kmj_A 242 -----------LLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLM 310 (406)
T ss_dssp -----------HHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred -----------HHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 3332221110 11136778888888877888765556788899999999
Q ss_pred HHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-C-----C-CCCCeEEeccCc
Q 010058 366 SKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-S-----A-MVPGGIRMGTPA 437 (519)
Q Consensus 366 ~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~-----~-~~~~~iRi~~~~ 437 (519)
+++.+.|++. |+.++.+.....++++.+. +.+..++.+.|.+.||.++. |.. . . ..++.+||+++.
T Consensus 311 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~----g~~~~~~~~~~~g~~~~iRis~~~ 384 (406)
T 1kmj_A 311 HYALSQLESVPDLTLYGPQNRLGVIAFNLG--KHHAYDVGSFLDNYGIAVRT----GHHCAMPLMAYYNVPAMCRASLAM 384 (406)
T ss_dssp HHHHHHHTTSTTEEEESCTTCCSEEEEEET--TCCHHHHHHHHHHTTEECEE----ECTTCHHHHHHTTCSCEEEEECCT
T ss_pred HHHHHHHhcCCCeEEecCCCcCCEEEEEEC--CCCHHHHHHHHhhCCcEEEe----ccccchHHHHhcCCCCeEEEEeec
Confidence 9999999998 8888765212345555553 45677888899899999873 321 0 0 124789999998
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHH
Q 010058 438 LTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 438 ~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.++ ++|++++++.|+++++.
T Consensus 385 ~~t----~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 385 YNT----HEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp TCC----HHHHHHHHHHHHHHHHH
T ss_pred CCC----HHHHHHHHHHHHHHHHh
Confidence 878 89999999999988753
No 19
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.97 E-value=2.2e-28 Score=250.63 Aligned_cols=335 Identities=14% Similarity=0.126 Sum_probs=239.2
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
..+.+.++...+++.|++++.+.+.+.+ + .........+++++++++|.+... +|.+++|++ ++
T Consensus 23 ~~~~~~p~p~~~~~~v~~a~~~~~~~~~---------~---~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~gg~~al 87 (393)
T 3kgw_A 23 TRLLLGPGPSNLAPRVLAAGSLRMIGHM---------Q---KEMLQIMEEIKQGIQYVFQTRNPL---TLVVSGSGHCAM 87 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTCCCCCTT---------S---HHHHHHHHHHHHHHHHHHTCCCSE---EEEESCCTTTHH
T ss_pred cceeccCCCCCCCHHHHHHhcccccCcc---------c---HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCCcHHHH
Confidence 3467888888899999999876432211 1 222345556679999999987542 477777766 99
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
..++.++++|||+|+++...+.++.. .. .+...|..+..++ .+ +++.+|++++++++++.++++|+++ ++
T Consensus 88 ~~~~~~~~~~gd~vl~~~~~~~~~~~-~~-----~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 158 (393)
T 3kgw_A 88 ETALFNLLEPGDSFLTGTNGIWGMRA-AE-----IADRIGARVHQMI--KK-PGEHYTLQEVEEGLAQHKPVLLFLVHGE 158 (393)
T ss_dssp HHHHHHHCCTTCEEEEEESSHHHHHH-HH-----HHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHHHhcCCCCCEEEEEeCCchhHHH-HH-----HHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCcEEEEeccC
Confidence 98999999999999998754422110 00 1223354455554 34 3467999999999987789999988 55
Q ss_pred c-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCc
Q 010058 235 A-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQ 312 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~ 312 (519)
| +|...|+++|+++|++||+++|+|++|..|....+.... ++|++++|+||++.|+.| |+++++++
T Consensus 159 nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~---~~d~~~~s~sK~~~~~~g~g~~~~~~~--------- 226 (393)
T 3kgw_A 159 SSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQ---GIDIMYSSSQKVLNAPPGISLISFNDK--------- 226 (393)
T ss_dssp TTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTT---TCCEEEEESSSTTCCCSSCEEEEECHH---------
T ss_pred CcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhc---CCCEEEecCcccccCCCceeEEEECHH---------
Confidence 5 889999999999999999999999999877554443333 579999999999987776 99999874
Q ss_pred chhhhHHHHhhhcc----------------------cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Q 010058 313 EVMYAYEDKINQAV----------------------FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 313 ~~~~~~~~~i~~~~----------------------~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~ 370 (519)
+.+.+.... .....++++...++++.++++.....++++..+++.++++++.+
T Consensus 227 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 301 (393)
T 3kgw_A 227 -----AKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHK 301 (393)
T ss_dssp -----HHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 222221110 01123677888888888888876666678999999999999999
Q ss_pred HHHhcCCEEecCCCC---cceeeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCCCCCCCCeEEecc-CccccCCCCH
Q 010058 371 SLLERGYDLVSGGTE---NHLVLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVE 445 (519)
Q Consensus 371 ~L~~~g~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRi~~-~~~ttrg~~~ 445 (519)
.|++.|++++.+... ..+.++.+ +.+.+..++.+.|.+. ||.++ ||.. +..++++|+++ +..++ +
T Consensus 302 ~L~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~----~g~~-~~~~~~iRi~~~~~~~~----~ 371 (393)
T 3kgw_A 302 HLQEMGLKFFVKDPEIRLPTITTVTV-PAGYNWRDIVSYVLDHFSIEIS----GGLG-PTEERVLRIGLLGYNAT----T 371 (393)
T ss_dssp HHHHTTCCBSSSSGGGBCSSEEEEEC-CTTBCHHHHHHHHHHHHCEECB----CCCG-GGTTTEEEEECCGGGCC----H
T ss_pred HHHHcCCeeccCChhhcCCeEEEEeC-CCCCCHHHHHHHHHHhCCEEEe----CCcc-cCCCCEEEEEecccCCC----H
Confidence 999998887643211 23333443 2355778888887665 99997 4332 23457899998 44446 8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010058 446 EDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 446 ~di~~l~~~l~~~l~~~ 462 (519)
+|++++++.|+++++..
T Consensus 372 ~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 372 ENVDRVAEALREALQHC 388 (393)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998753
No 20
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=1.8e-28 Score=254.30 Aligned_cols=352 Identities=16% Similarity=0.181 Sum_probs=243.8
Q ss_pred HHHHhcccCeeecC-CCCCCcHHHHHHHhhHhh--hccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceE
Q 010058 70 LEKARQWKGLELIP-SENFTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNV 146 (519)
Q Consensus 70 ~e~~~~~~~i~L~a-~en~~~~~V~ea~~~~l~--~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V 146 (519)
.|.....+.+.|.. +..++++.|++++.+.+. +.+ ++|....+..........+.+++++++++|++++ +|
T Consensus 15 ~~~~~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~----~v 88 (423)
T 3lvm_A 15 GVYRAMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQAEEAVDIARNQIADLVGADPR----EI 88 (423)
T ss_dssp -----CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG----GE
T ss_pred CcccccCCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC----eE
Confidence 44455566777764 344679999999999887 545 5554411222233445556777999999999864 48
Q ss_pred EeCCcHH-HHHHHHHhhcC----CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHh
Q 010058 147 QSLSGSP-ANFQVYTALLK----PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSA 221 (519)
Q Consensus 147 ~~~sGs~-a~~~~~~all~----pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i 221 (519)
++++|++ |+..++.++++ |||+|+++++.|.++...... ....|..+..++ .+ +++.+|++++++++
T Consensus 89 ~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-----~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i 160 (423)
T 3lvm_A 89 VFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQ-----LEREGFEVTYLA--PQ-RNGIIDLKELEAAM 160 (423)
T ss_dssp EEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHH-----HHHTTCEEEEEC--CC-TTSCCCHHHHHHHC
T ss_pred EEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHH-----HHHcCCEEEEec--cC-CCCccCHHHHHHhc
Confidence 8888876 88888888874 899999999888776543221 112244444444 44 36789999999999
Q ss_pred hhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCC-cceE
Q 010058 222 ALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR-GAMI 298 (519)
Q Consensus 222 ~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gpr-gG~i 298 (519)
++ ++++|+++ ++| +|...|+++|+++|+++|++||+|++|..|....+.... ++|++++|+||++ |+. .|++
T Consensus 161 ~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~sK~~-g~~g~G~~ 235 (423)
T 3lvm_A 161 RD-DTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQL---KVDLMSFSGHKIY-GPKGIGAL 235 (423)
T ss_dssp CT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTS---CCSEEEEESTTTT-SCSSCEEE
T ss_pred CC-CcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhc---CCCEEEechHHhc-CCCCeEEE
Confidence 87 89999988 555 899999999999999999999999998877654433332 5799999999965 455 4999
Q ss_pred Eeecccc--ccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 299 FFRKGVK--EIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 299 ~~~~~~~--~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
+++++.. +.+ ..|+.. ......++++...++++.++++.+.. .+++..+++.++++++.+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 303 (423)
T 3lvm_A 236 YVRRKPRVRIEAQMHGGGH-----------ERGMRSGTLPVHQIVGMGEAYRIAKE-EMATEMERLRGLRNRLWNGIKDI 303 (423)
T ss_dssp EECBTTBCCCCCSSCSSCT-----------TTTTCCSCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEeccccCCCCccccCCcc-----------cccccCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence 9887421 111 111110 00112367788888888888876543 36888999999999999999988
Q ss_pred -CCEEecCCCC--cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CC-----------------CCCCeEEec
Q 010058 376 -GYDLVSGGTE--NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SA-----------------MVPGGIRMG 434 (519)
Q Consensus 376 -g~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~-----------------~~~~~iRi~ 434 (519)
|+.++.+... .+++.+.+ .+.+..++.+.|.+ |.++ +|.. .+ ...+.|||+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~--i~v~----~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~ 375 (423)
T 3lvm_A 304 EEVYLNGDLEHGAPNILNVSF--NYVEGESLIMALKD--LAVS----SGSACTSASLEPSYVLRALGLNDELAHSSIRFS 375 (423)
T ss_dssp TTEEEESCSTTBCTTEEEEEE--TTSCHHHHHHHTTT--EECB----CCCC-----CCCCHHHHHHTCCHHHHHTEEEEE
T ss_pred CCEEEeCCccccCCCeEEEEe--CCCCHHHHHHHHhh--heec----cCccccCCCccccHHHHHhCCCccccCceEEEE
Confidence 8888765321 12333333 35678888888877 7775 3321 11 014789999
Q ss_pred cCccccCCCCHHHHHHHHHHHHHHHHHHhh
Q 010058 435 TPALTSRGFVEEDFEKVAEFFDAAVKLALK 464 (519)
Q Consensus 435 ~~~~ttrg~~~~di~~l~~~l~~~l~~~~~ 464 (519)
++..++ ++|++++++.|+++++...+
T Consensus 376 ~~~~~t----~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 376 LGRFTT----EEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp CCTTCC----HHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCC----HHHHHHHHHHHHHHHHHhhc
Confidence 987777 89999999999999976543
No 21
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.96 E-value=1.8e-28 Score=247.30 Aligned_cols=330 Identities=15% Similarity=0.074 Sum_probs=236.3
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQ 157 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~ 157 (519)
+.+++++.++++.|++++.+.+.+ + + | .........+++++++++|++.+. .+|.+++|++ |+..
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~-~-------~-~---~~~~~~~~~l~~~la~~~g~~~~~--~~v~~t~g~t~a~~~ 67 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRG-H-------L-D---PEVLRVNRAIQERLAALFDPGEGA--LVAALAGSGSLGMEA 67 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCC-T-------T-C---HHHHHHHHHHHHHHHHHHCCCTTC--EEEEESSCHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhccccc-c-------c-C---HHHHHHHHHHHHHHHHHhCCCCCC--ceEEEcCCcHHHHHH
Confidence 567899999999999998876543 1 1 1 122344556679999999986211 3688988877 8888
Q ss_pred HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-
Q 010058 158 VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA- 235 (519)
Q Consensus 158 ~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn- 235 (519)
++.++++ |+|++++++|.++ . ... .+...|..+..++ .+ +++.+|++++++.+++.++++|+++ ++|
T Consensus 68 ~~~~~~~--d~vl~~~~~~~~~-~-~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 136 (353)
T 2yrr_A 68 GLANLDR--GPVLVLVNGAFSQ-R-VAE----MAALHGLDPEVLD--FP-PGEPVDPEAVARALKRRRYRMVALVHGETS 136 (353)
T ss_dssp HHHTCSC--CCEEEEECSHHHH-H-HHH----HHHHTTCCEEEEE--CC-TTSCCCHHHHHHHHHHSCCSEEEEESEETT
T ss_pred HHHHhcC--CcEEEEcCCCchH-H-HHH----HHHHcCCceEEEe--CC-CCCCCCHHHHHHHHHhCCCCEEEEEccCCC
Confidence 8888876 8999988776654 1 110 1122344445554 44 3578999999999986578999888 555
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcch
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEV 314 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~ 314 (519)
+|...|+++|.++|+++|+++|+|++|..|....++... ++|++++|+||++.|+.| |+++++++
T Consensus 137 tG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~----------- 202 (353)
T 2yrr_A 137 TGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAM---GVDYAFTGSQKCLSAPPGLAPIAASLE----------- 202 (353)
T ss_dssp TTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEECCTTSTTCCCSSCEEEEECHH-----------
T ss_pred cceecCHHHHHHHHHHcCCeEEEEcCccccccccccccc---CceEEEecCcccccCCCceEEEEECHH-----------
Confidence 789999999999999999999999999755432211111 479999999999988776 99999884
Q ss_pred hhhHHHHhhh--------------cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEe
Q 010058 315 MYAYEDKINQ--------------AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLV 380 (519)
Q Consensus 315 ~~~~~~~i~~--------------~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 380 (519)
+.+.+.. .......++++...++++.++++.+...++++..++++++++++.+.|++.|++++
T Consensus 203 ---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 279 (353)
T 2yrr_A 203 ---ARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPY 279 (353)
T ss_dssp ---HHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEES
T ss_pred ---HHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 2222210 00011235778888888888888765555788999999999999999999888876
Q ss_pred cCCC-CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHH-HHHHHHHHH
Q 010058 381 SGGT-ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFE-KVAEFFDAA 458 (519)
Q Consensus 381 ~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~-~l~~~l~~~ 458 (519)
.+.. .++++++.+. .+.+..++.+.|.+.||.++. +.. ...++++|++++..++ ++|++ ++++.|+++
T Consensus 280 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~----g~~-~~~~~~iRi~~~~~~~----~~~~~~~~~~~l~~~ 349 (353)
T 2yrr_A 280 PKASPLPTVLVVRPP-EGVDADRLVRALYAEGVAVAG----GIG-PTRGQVLRLGLMGEGA----RREAYQAFLKALDRA 349 (353)
T ss_dssp CSSSBCTTEEEEECC-TTCCHHHHHHHHHHTTEECEE----CCG-GGTTTCEEEECSGGGS----CHHHHHHHHHHHHHH
T ss_pred cCccCCCeEEEEECC-CCCCHHHHHHHHHHCCEEEeC----Ccc-ccCCCeEEEecCccCC----HHHHHHHHHHHHHHH
Confidence 5421 3445455552 356788898889888999973 331 1134679999977777 78999 999999988
Q ss_pred HH
Q 010058 459 VK 460 (519)
Q Consensus 459 l~ 460 (519)
++
T Consensus 350 l~ 351 (353)
T 2yrr_A 350 LA 351 (353)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 22
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.96 E-value=3.5e-28 Score=251.49 Aligned_cols=340 Identities=14% Similarity=0.123 Sum_probs=241.0
Q ss_pred CeeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCC--CCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCcHH
Q 010058 78 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGA--RYYGGNEYIDMAESLCQKRALDAFQL-DPAKWGVNVQSLSGSP 153 (519)
Q Consensus 78 ~i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~--~~y~~~~~~~~le~~~~~~~~~~~g~-~~~~~~~~V~~~sGs~ 153 (519)
.+.|..+++ ++|+.|.+++.+.+.+.. ++++. ..|+. ........+++.+++++|. +++ +|.+++|++
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~y~~--~~~~~~~~l~~~la~~~~~~~~~----~v~~~~g~t 100 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDN--ANVHRGAHQLSV--RATDAYEAVRNKVAKFINARSPR----EIVYTRNAT 100 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTC--CCC--CCSHHHH--HHHHHHHHHHHHHHHHTTCSCGG----GEEEESSHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcc--CCCCcccchHHH--HHHHHHHHHHHHHHHHcCCCCCC----eEEEcCChH
Confidence 578876655 568999999999887632 33331 11221 1123334556899999998 553 477887776
Q ss_pred -HHHHHHHhh----cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcE
Q 010058 154 -ANFQVYTAL----LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKL 228 (519)
Q Consensus 154 -a~~~~~~al----l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~kl 228 (519)
|+..++.++ ++|||+|+++++.|.+...+... .+...|..+..++ .+ +++.+|++++++++++ ++++
T Consensus 101 ~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~ 172 (420)
T 1t3i_A 101 EAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQM----VAAKTGAVLKFVQ--LD-EQESFDLEHFKTLLSE-KTKL 172 (420)
T ss_dssp HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHH----HHHHHCCEEEEEC--BC-TTSSBCHHHHHHHCCT-TEEE
T ss_pred HHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHH----HHHhcCcEEEEec--cC-CCCCcCHHHHHHhhCC-CceE
Confidence 888899999 89999999999888775322110 1112344444444 44 4578999999999987 8999
Q ss_pred EEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc
Q 010058 229 IVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 305 (519)
Q Consensus 229 Ii~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~ 305 (519)
|+++ ++| +|...|+++|.++|+++|+++|+|++|..|....+.... ++|++++|+||.+ |+.| |+++++++
T Consensus 173 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~-~~~g~G~~~~~~~-- 246 (420)
T 1t3i_A 173 VTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI---DCDWLVASGHKMC-APTGIGFLYGKEE-- 246 (420)
T ss_dssp EEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCSEEEEEGGGTT-SCTTCEEEEECHH--
T ss_pred EEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhc---CCCEEEEehhhhc-CCCceEEEEEchH--
Confidence 9888 555 899999999999999999999999999877543222111 5799999999954 5555 99999873
Q ss_pred cccccCcchhhhHHHHhhhcccC--------------------CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHH
Q 010058 306 EINKQGQEVMYAYEDKINQAVFP--------------------GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNS 365 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~--------------------~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~ 365 (519)
+.+.+...... ...++++...++++..+++.+...++++..+++.+++
T Consensus 247 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 314 (420)
T 1t3i_A 247 ------------ILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELT 314 (420)
T ss_dssp ------------HHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ------------HHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 33333221111 1135777888888777787765556788899999999
Q ss_pred HHHHHHHHhc-CCEEecCCC----CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCC------CCC-CCeEEe
Q 010058 366 SKFARSLLER-GYDLVSGGT----ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVS------AMV-PGGIRM 433 (519)
Q Consensus 366 ~~l~~~L~~~-g~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~------~~~-~~~iRi 433 (519)
+++.+.|++. |++++.+.. ...++++.+. +.+..++.+.|.+.||.++ |+... ..+ ++.+||
T Consensus 315 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~----~~~~~~~~~~~~~g~~~~iRi 388 (420)
T 1t3i_A 315 HYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVA--GLHASDVATMVDQDGIAIR----SGHHCTQPLHRLFDASGSARA 388 (420)
T ss_dssp HHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEET--TBCHHHHHHHHHTTTEECB----CSCTTCHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHhCCCeEEeCCCccccccCCEEEEEEC--CCCHHHHHHHHHHCCeEEe----eccccchHHHHhcCCCCeEEE
Confidence 9999999998 888876531 2445555543 3467788899999999997 33210 012 578999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+++..++ ++|++++++.|+++++.
T Consensus 389 s~~~~~~----~~~i~~~~~~l~~~~~~ 412 (420)
T 1t3i_A 389 SLYFYNT----KEEIDLFLQSLQATIRF 412 (420)
T ss_dssp ECCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred ecCCCCC----HHHHHHHHHHHHHHHHH
Confidence 9988777 89999999999998864
No 23
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.96 E-value=4.6e-28 Score=248.70 Aligned_cols=329 Identities=14% Similarity=0.102 Sum_probs=236.8
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANF 156 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~ 156 (519)
...+.++..++++.|++++.+.+.+. |+ ....++.+.+++++++++|++++. +|.+++|++ |+.
T Consensus 35 ~~l~~~~~~~~~~~v~~a~~~~~~~~----------~~--~~~~~~~~~~~~~la~~~g~~~~~---~v~~t~g~t~al~ 99 (393)
T 1vjo_A 35 RLLLGPGPSNAHPSVLQAMNVSPVGH----------LD--PAFLALMDEIQSLLRYVWQTENPL---TIAVSGTGTAAME 99 (393)
T ss_dssp CEECSSSCCCCCHHHHHHHSSCCCCT----------TS--HHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHH
T ss_pred ceeccCCCCCCCHHHHHHHhcccccc----------cC--HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCchHHHHH
Confidence 34556677778999999998765431 22 224456677789999999997641 588888887 898
Q ss_pred HHHHhhcCCCCEEEEecCCCcc--cccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-c
Q 010058 157 QVYTALLKPHERIMALDLPHGG--HLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-A 233 (519)
Q Consensus 157 ~~~~all~pGD~Vl~~~~~~~~--~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~ 233 (519)
.++.++++|||+|+++++.|.+ +.. .+...|..+..++ .+ +++.+|++++++.+++.++++|+++ +
T Consensus 100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~ 168 (393)
T 1vjo_A 100 ATIANAVEPGDVVLIGVAGYFGNRLVD--------MAGRYGADVRTIS--KP-WGEVFSLEELRTALETHRPAILALVHA 168 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHHHHH--------HHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESE
T ss_pred HHHHhccCCCCEEEEEcCChhHHHHHH--------HHHHcCCceEEEe--cC-CCCCCCHHHHHHHHhhCCceEEEEecc
Confidence 8999999999999999977665 221 1223344444454 44 3578999999999976578999888 5
Q ss_pred cc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccC
Q 010058 234 SA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQG 311 (519)
Q Consensus 234 sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g 311 (519)
+| +|...|+++|.++|+++|+++|+|++|..|.....+... ++|++++|+||++.+|.+ |+++++++
T Consensus 169 ~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~di~~~s~sK~l~~~~~~G~l~~~~~-------- 237 (393)
T 1vjo_A 169 ETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAW---GVDLAYSCSQKGLGCSPGASPFTMSSR-------- 237 (393)
T ss_dssp ETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCSEEECCSSSTTCSCSSCEEEEECHH--------
T ss_pred CCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCccccc---CccEEEEcCcccccCCCceEEEEECHH--------
Confidence 55 888999999999999999999999999866543332222 579999999999987766 99999873
Q ss_pred cchhhhHHHHhhhc-------cc----------C-CCC-CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 312 QEVMYAYEDKINQA-------VF----------P-GLQ-GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 312 ~~~~~~~~~~i~~~-------~~----------~-~~~-g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
+.+.+... .+ . ... |+++...++++..+++.....++++..+++.++++++.+.|
T Consensus 238 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 311 (393)
T 1vjo_A 238 ------AIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERL 311 (393)
T ss_dssp ------HHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 33333110 00 0 112 37788888888888887654457889999999999999999
Q ss_pred HhcCCEEecCCC--CcceeeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCCCCCCCCeEEeccCc-cccCCCCHHHH
Q 010058 373 LERGYDLVSGGT--ENHLVLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDVSAMVPGGIRMGTPA-LTSRGFVEEDF 448 (519)
Q Consensus 373 ~~~g~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRi~~~~-~ttrg~~~~di 448 (519)
++.|++++.+.. ...+.++.+ +.+.+..++.+.|.+. ||.++ |+.. ...++.+||++.. .++ ++++
T Consensus 312 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~----~g~~-~~~~~~iRis~~~~~~~----~~~i 381 (393)
T 1vjo_A 312 EDIGLSLHVEKEYRLPTLTTVCI-PDGVDGKAVARRLLNEHNIEVG----GGLG-ELAGKVWRVGLMGFNSR----KESV 381 (393)
T ss_dssp HHTTCCBSSCGGGBCSSEEEEEC-CTTCCHHHHHHHHHHHHCEECE----ECCG-GGTTTEEEEECCGGGCS----HHHH
T ss_pred HHcCCcccCCccccCCcEEEEEc-CCCCCHHHHHHHHHhhCCEEEe----cCcc-ccCCCEEEEeCCccCCh----HHHH
Confidence 998887765421 123344444 2355678888888776 99997 4432 1235789999543 445 6789
Q ss_pred HHHHHHHHHHH
Q 010058 449 EKVAEFFDAAV 459 (519)
Q Consensus 449 ~~l~~~l~~~l 459 (519)
+++++.|.+++
T Consensus 382 ~~~~~~l~~~l 392 (393)
T 1vjo_A 382 DQLIPALEQVL 392 (393)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 24
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.96 E-value=2.7e-28 Score=250.14 Aligned_cols=362 Identities=12% Similarity=0.090 Sum_probs=246.6
Q ss_pred hhhhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 010058 55 APLEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRAL 132 (519)
Q Consensus 55 ~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~ 132 (519)
+++..+.+.....+.....+..+.|+|..+++. +++.+.+++.+.+.+.. .+ |+...+..++++.+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~~~ 77 (389)
T 1gd9_A 5 DRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-TH------YGPNIGLLELREAIAEKLK 77 (389)
T ss_dssp HHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHH
T ss_pred hHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CC------CCCCCCcHHHHHHHHHHHH
Confidence 344455555444444444333567899877764 57899999998886521 12 3333445678877778888
Q ss_pred HHcCCCCCCCcce-EEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CC
Q 010058 133 DAFQLDPAKWGVN-VQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-ST 209 (519)
Q Consensus 133 ~~~g~~~~~~~~~-V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~ 209 (519)
+.+|.+.+. .+ |.+++|++ ++..++.++++|||+|++.++.|.++.. .+...|..+..+++ ++ ++
T Consensus 78 ~~~g~~~~~--~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~~--~~~~~ 145 (389)
T 1gd9_A 78 KQNGIEADP--KTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGGKPVEVPT--YEEDE 145 (389)
T ss_dssp HHHCCCCCT--TTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTCEEEEEEC--CGGGT
T ss_pred HHhCCCCCC--CCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEecc--CCccC
Confidence 877853221 35 88888776 8888999999999999999988876543 22234555555554 33 24
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccC----CCCCC-CCCC
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAG-ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAG----VIPSP-FEYA 279 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~----~~~~p-~~~~ 279 (519)
+.+|++++++++++ ++++|+++ ++| +|... ++++|.++|++||+++|+|++|..+..... +...+ ....
T Consensus 146 ~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 224 (389)
T 1gd9_A 146 FRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFER 224 (389)
T ss_dssp TCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred CCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCC
Confidence 67899999999987 88988887 666 78766 589999999999999999999876543211 11100 1246
Q ss_pred eEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC-HhHHH
Q 010058 280 DVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT-PEYKA 356 (519)
Q Consensus 280 di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~-~~~~~ 356 (519)
|+++.|+||++ +|.|.|++++++ ++.+.+....... .++++.....++..+++.... ..+++
T Consensus 225 ~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~ 289 (389)
T 1gd9_A 225 TITVNGFSKTFAMTGWRLGFVAAPS--------------WIIERMVKFQMYN-ATCPVTFIQYAAAKALKDERSWKAVEE 289 (389)
T ss_dssp EEEEEESTTTTTCGGGCCEEEECCH--------------HHHHHHHHHHTTT-TCSCCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred EEEEecChhhcCCcccceEEEEECH--------------HHHHHHHHHHhhh-ccCCCHHHHHHHHHHHhCCCcchHHHH
Confidence 89999999987 466779999987 5555554432222 234455555555556653211 14577
Q ss_pred HHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCCCCCCCCeEEecc
Q 010058 357 YQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDVSAMVPGGIRMGT 435 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRi~~ 435 (519)
..+++.++++.+.+.|++.|+.++.+ ..+.+.++.+...+.+..++.+.|. ++||.+...... ++..++++||++
T Consensus 290 ~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~---~~~~~~~iRi~~ 365 (389)
T 1gd9_A 290 MRKEYDRRRKLVWKRLNEMGLPTVKP-KGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAF---GKAGEGYVRISY 365 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCC-CBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGG---CGGGTTBEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCeecCC-CeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhh---CCCCCCeEEEEe
Confidence 88899999999999999988877653 2344556666433456778888886 899999743211 122357899998
Q ss_pred CccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.. + +++++++++.|.++++.
T Consensus 366 ~~--~----~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 366 AT--A----YEKLEEAMDRMERVLKE 385 (389)
T ss_dssp CS--C----HHHHHHHHHHHHHHHHH
T ss_pred cC--C----HHHHHHHHHHHHHHHHh
Confidence 74 4 79999999999998864
No 25
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.96 E-value=7.6e-28 Score=246.90 Aligned_cols=329 Identities=13% Similarity=0.068 Sum_probs=234.1
Q ss_pred cCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHH
Q 010058 82 IPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYT 160 (519)
Q Consensus 82 ~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~ 160 (519)
.++..++++.|++++.+.+.+. ++ .........+++++++++|++++ +|.+++|++ ++..++.
T Consensus 14 ~~~~~~~~~~v~~a~~~~~~~~--------~~----~~~~~~~~~l~~~la~~~g~~~~----~v~~t~g~t~a~~~~~~ 77 (392)
T 2z9v_A 14 TAGPVNAYPEVLRGLGRTVLYD--------YD----PAFQLLYEKVVDKAQKAMRLSNK----PVILHGEPVLGLEAAAA 77 (392)
T ss_dssp SSSCCCCCHHHHHHTTSCCCCT--------TS----HHHHHHHHHHHHHHHHHTTCSSC----CEEESSCTHHHHHHHHH
T ss_pred cCCCcCCCHHHHHHHhcccccc--------cc----HHHHHHHHHHHHHHHHHhCCCCC----EEEEeCCchHHHHHHHH
Confidence 3455578999999988765431 11 11223344566999999999764 488888777 8888999
Q ss_pred hhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-hCCcEEEEc-ccc-cc
Q 010058 161 ALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL-FRPKLIVAG-ASA-YA 237 (519)
Q Consensus 161 all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~-~k~klIi~~-~sn-~g 237 (519)
++++|||+|+++++.|.++. ... .....|..+..++ .+ +++.+|++++++++++ .++++|+++ ++| +|
T Consensus 78 ~~~~~gd~Vl~~~~~~~~~~--~~~----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG 148 (392)
T 2z9v_A 78 SLISPDDVVLNLASGVYGKG--FGY----WAKRYSPHLLEIE--VP-YNEAIDPQAVADMLKAHPEITVVSVCHHDTPSG 148 (392)
T ss_dssp HHCCTTCCEEEEESSHHHHH--HHH----HHHHHCSCEEEEE--CC-TTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGT
T ss_pred HhcCCCCEEEEecCCcccHH--HHH----HHHHcCCceEEee--CC-CCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCc
Confidence 99999999999987775542 110 0111244444554 44 3467999999999953 378999888 555 79
Q ss_pred ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhh
Q 010058 238 RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMY 316 (519)
Q Consensus 238 ~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~ 316 (519)
...|+++|.++|+++|+++|+|++|..|....++... ++|++++|+||++.|+.| |+++++++
T Consensus 149 ~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~sK~~~~~~g~G~l~~~~~------------- 212 (392)
T 2z9v_A 149 TINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDC---KADIYVTGPNKCLGAPPGLTMMGVSER------------- 212 (392)
T ss_dssp EECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGG---TCSEEEECSSSTTCCCSCCEEEEECHH-------------
T ss_pred eeccHHHHHHHHHHcCCeEEEEcccccCCcccccccc---cceEEEecCcccccCCCceeEEEECHH-------------
Confidence 9999999999999999999999999876554332222 579999999999988777 99999873
Q ss_pred hHHHHhhhc-------------------ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010058 317 AYEDKINQA-------------------VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY 377 (519)
Q Consensus 317 ~~~~~i~~~-------------------~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 377 (519)
+.+.+... ......++++...++++.++++.+...++++..+++.++++++.+.|++.|+
T Consensus 213 -~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~ 291 (392)
T 2z9v_A 213 -AWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGL 291 (392)
T ss_dssp -HHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -HHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33322210 0011236778888888888888765545788899999999999999998888
Q ss_pred EEecCCC---CcceeeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCCCCCCCCeEEeccCc-cccCCCCHHHHHHHH
Q 010058 378 DLVSGGT---ENHLVLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDVSAMVPGGIRMGTPA-LTSRGFVEEDFEKVA 452 (519)
Q Consensus 378 ~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRi~~~~-~ttrg~~~~di~~l~ 452 (519)
.++.+.. ..+++++.+. .+.+..++.+.|.+. ||.+. |+.. +...+++|+++.. .++ ++|+++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~----~g~~-~~~~~~lRi~~~~~~~~----~~~i~~~~ 361 (392)
T 2z9v_A 292 SVWAASDSIASPTTTAVRTP-DGVDEKALRQAARARYGVVFS----SGRG-ETLGKLTRIGHMGPTAQ----PIYAIAAL 361 (392)
T ss_dssp CBSSSSGGGBCTTEEEEECC-TTCCHHHHHHHHHHHHCEECE----ECCG-GGTTTEEEEECCGGGCS----HHHHHHHH
T ss_pred eeccCCccccCCceEEEECC-CCCCHHHHHHHHHhcCCEEEe----cCCC-CCCCCeEEEeCcccccC----HHHHHHHH
Confidence 7765221 2344555542 356778888888776 99997 3331 1235789999644 666 89999999
Q ss_pred HHHHHHHHHH
Q 010058 453 EFFDAAVKLA 462 (519)
Q Consensus 453 ~~l~~~l~~~ 462 (519)
+.|+++++..
T Consensus 362 ~~l~~~~~~~ 371 (392)
T 2z9v_A 362 TALGGAMNAA 371 (392)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999998653
No 26
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.96 E-value=5.6e-28 Score=248.37 Aligned_cols=335 Identities=19% Similarity=0.213 Sum_probs=240.2
Q ss_pred cCeeecCCCC---CCcHHHHHHHhhHhhhccCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 77 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYY-GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y-~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
+.|++..+.+ ..++.+.+++.+.+.+ +..++++.++. +..+...+++ +++++++|.+. +|++++|+
T Consensus 44 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt 113 (399)
T 3tqx_A 44 EVLNFCANNYLGLADHPALIKTAQTVVEQ-YGFGMASVRFICGTQTIHKELE----KDISEFLGTDD-----TILYSSCF 113 (399)
T ss_dssp EEEECSSCCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCCCCCCCBHHHHHHH----HHHHHHHTCSE-----EEEESCHH
T ss_pred eEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCccccCchHHHHHH----HHHHHHHCCCc-----EEEECchH
Confidence 3577777643 2368999999998876 53455555543 3334455555 88888999763 59999998
Q ss_pred HHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CCc
Q 010058 153 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-----RPK 227 (519)
Q Consensus 153 ~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~k 227 (519)
.++..++.++++|||.|++.++.|+++.. .+...|..+..++. +|++++++.+++. +++
T Consensus 114 ~a~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~~--------~d~~~l~~~l~~~~~~~~~~~ 177 (399)
T 3tqx_A 114 DANGGLFETLLGPEDAIISDELNHASIID--------GIRLCKAQRYRYKN--------NAMGDLEAKLKEADEKGARFK 177 (399)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHSCCSEEEEECT--------TCTTHHHHHHHHHHTTTCSSE
T ss_pred HHHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCceeEeCC--------CCHHHHHHHHHhhhccCCCce
Confidence 88888999999999999999988877654 23334544444331 4778888888764 789
Q ss_pred EEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC----CC-CCCCeEEEEcCCCcccCCCcceEEe
Q 010058 228 LIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP----SP-FEYADVVTTTTHKSLRGPRGAMIFF 300 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~----~p-~~~~di~~~S~~K~l~GprgG~i~~ 300 (519)
+|+++ ++| +|...|+++|.++|+++|+++|+|++|..|........ .. ....|++++|+||+++|++||++++
T Consensus 178 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~ 257 (399)
T 3tqx_A 178 LIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSG 257 (399)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEE
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEc
Confidence 99988 555 78999999999999999999999999876653221100 00 1256999999999998899999999
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCC-CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPG-LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~-~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
++ ++.+.+.....+. ..++++...++++..+++... .+.++.++++.++++++.+.|++.|+++
T Consensus 258 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 322 (399)
T 3tqx_A 258 HK--------------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGFQL 322 (399)
T ss_dssp CH--------------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred CH--------------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 88 4444443321111 124566777777777777653 4578889999999999999999999887
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+.+ ...++++.+.. +.+..++.+.|.++||.+.....+. .+...+.+|++++..++ ++|++++++.|.+++
T Consensus 323 ~~~--~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~--~~~~~~~iRi~~~~~~~----~~~i~~~~~~l~~~~ 393 (399)
T 3tqx_A 323 VPG--NHPIIPVMLGD-AQLATNMADHLLQEGIYVVGFSYPV--VPMGKARIRVQMSAVHT----QQQLDRAIEAFGQVG 393 (399)
T ss_dssp CCC--SSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTT--SCTTCEEEEEECCTTCC----HHHHHHHHHHHHHHH
T ss_pred CCC--CCCEEEEEeCC-HHHHHHHHHHHHHCCCEEeeeCCCC--CCCCCceEEEEeecCCC----HHHHHHHHHHHHHHH
Confidence 642 34566665532 2346678888888999997322111 12345689999987777 899999999999988
Q ss_pred HH
Q 010058 460 KL 461 (519)
Q Consensus 460 ~~ 461 (519)
+.
T Consensus 394 ~~ 395 (399)
T 3tqx_A 394 KK 395 (399)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 27
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.96 E-value=7.2e-28 Score=247.38 Aligned_cols=348 Identities=13% Similarity=0.077 Sum_probs=237.2
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANF 156 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~ 156 (519)
.+.+.++...+++.|.+++.+.+.+. | ..+.+.....+++.+++++|++++. +|.+++|++ ++.
T Consensus 19 ~~~~~~~p~~~~~~v~~a~~~~~~~~----------~--~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al~ 83 (396)
T 2ch1_A 19 KIMMGPGPSNCSKRVLTAMTNTVLSN----------F--HAELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGME 83 (396)
T ss_dssp CBCCSSSSCCCCHHHHHHTTSCCCCT----------T--CHHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhccccccC----------C--ChhHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHHH
Confidence 35566666678999999987654321 1 1223344455669999999998741 588888877 898
Q ss_pred HHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc
Q 010058 157 QVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA 235 (519)
Q Consensus 157 ~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn 235 (519)
.++.++++|||+|+++++.|.++... . .+...|..+..++ .+ +++.+|++++++++++.++++|+++ ++|
T Consensus 84 ~~~~~~~~~gd~vl~~~~~~~~~~~~-~-----~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~n 154 (396)
T 2ch1_A 84 AMLSNLLEEGDRVLIAVNGIWAERAV-E-----MSERYGADVRTIE--GP-PDRPFSLETLARAIELHQPKCLFLTHGDS 154 (396)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHHHH-H-----HHHHTTCEEEEEE--CC-TTSCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCeEEEEcCCcccHHHH-H-----HHHHcCCceEEec--CC-CCCCCCHHHHHHHHHhCCCCEEEEECCCC
Confidence 89999999999999999877665210 0 1223354455554 44 3578999999999986579999988 555
Q ss_pred -ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--cccc--
Q 010058 236 -YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINK-- 309 (519)
Q Consensus 236 -~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~-- 309 (519)
+|...|+++|.++|+++|+++|+|++|..|....++... ++|++++|+||++.|+.| |+++++++.. +...
T Consensus 155 ptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~ 231 (396)
T 2ch1_A 155 SSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKW---EIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRT 231 (396)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTT---TCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSS
T ss_pred CCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhc---CcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccC
Confidence 899999999999999999999999998866543332222 579999999999987766 8999887421 0000
Q ss_pred -cCcc-hhhhHHHH-hhh-cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCC
Q 010058 310 -QGQE-VMYAYEDK-INQ-AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTE 385 (519)
Q Consensus 310 -~g~~-~~~~~~~~-i~~-~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 385 (519)
.+.. ........ +.. .......++++...++++.++++.....++++..+++.++++++.+.|++.|+.++.+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 311 (396)
T 2ch1_A 232 KSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPR 311 (396)
T ss_dssp CCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGG
T ss_pred cccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCcc
Confidence 0000 00000000 000 0001123677777788888888876545678889999999999999999988887654221
Q ss_pred ---cceeeeeccCCCCcHHHHHHhhcc-cCeEEcccccCCCCCCCCCCeEEeccC-ccccCCCCHHHHHHHHHHHHHHHH
Q 010058 386 ---NHLVLVNLRNKGIDGSRVEKVLES-VHIAANKNTVPGDVSAMVPGGIRMGTP-ALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 386 ---~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRi~~~-~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..++++.+. .+.+..++.+.|.+ .||.++ ++.. +..++++||++. ..++ ++|++++++.|+++++
T Consensus 312 ~~~~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~----~g~~-~~~~~~iRi~~~~~~~~----~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 312 HRLPTVTGIMIP-KGVDWWKVSQYAMNNFSLEVQ----GGLG-PTFGKAWRVGIMGECST----VQKIQFYLYGFKESLK 381 (396)
T ss_dssp GBCTTEEEEECC-TTCCHHHHHHHHHHHHCBCCB----CCCG-GGTTTEEEEECCGGGCS----HHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEcC-CCCCHHHHHHHHHHhCCEEEe----cCcc-ccCCCEEEEECCCCcCC----HHHHHHHHHHHHHHHH
Confidence 124455442 35678888888765 599986 3321 123578999984 3446 8999999999999987
Q ss_pred HH
Q 010058 461 LA 462 (519)
Q Consensus 461 ~~ 462 (519)
..
T Consensus 382 ~~ 383 (396)
T 2ch1_A 382 AT 383 (396)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 28
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=2.7e-28 Score=251.59 Aligned_cols=341 Identities=14% Similarity=0.098 Sum_probs=238.7
Q ss_pred CeeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 78 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 78 ~i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
.+.|..+.+ ++++.|++++.+.+.+.+ ++|+..| ............+++++++++|++++ +|.+++|++ ++
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~al 99 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSG--ASTVGAH-PSARRSAAVLDAAREAVADLVNADPG----GVVLGADRAVLL 99 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCC--SSSCSSS-HHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHHH
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcC--CCCCCcc-HHHHHHHHHHHHHHHHHHHHhCCCCC----eEEEeCChHHHH
Confidence 466654444 578999999999887633 3343322 11112334455667999999999763 588899888 77
Q ss_pred HHHHHhh---cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 156 FQVYTAL---LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 156 ~~~~~al---l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
..++.++ ++|||+|++++++|.++........ ...|..+..++ ++++++.+|+++|++.+++ ++++|+++
T Consensus 100 ~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~----~~~g~~v~~v~--~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 172 (406)
T 3cai_A 100 SLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAA----HRYGAKVKWAE--VDIETGELPTWQWESLISK-STRLVAVN 172 (406)
T ss_dssp HHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHH----HHHBCEEEEEC--CCTTTCCCCGGGHHHHCCT-TEEEEEEE
T ss_pred HHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHH----HhcCCeEEEEe--cCcccCCcCHHHHHHHhCC-CceEEEEe
Confidence 7777777 7999999999988877654332110 01244444444 4545678999999999986 89999888
Q ss_pred -ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcc-eEEeecccccccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGA-MIFFRKGVKEINK 309 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG-~i~~~~~~~~~~~ 309 (519)
++| +|...|+++|.++|+++|+++|+|++|..|....++... ++|++++|+||++ ||++| ++++++
T Consensus 173 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~~K~~-g~~~G~~~~~~~------- 241 (406)
T 3cai_A 173 SASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRET---DADVVTVNAHAWG-GPPIGAMVFRDP------- 241 (406)
T ss_dssp SBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHH---CCSEEEEEGGGGT-SCSCEEEEESCH-------
T ss_pred CCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhc---CCCEEEeehhhhc-CCCcCeEEEEeh-------
Confidence 555 799999999999999999999999999876543322111 5799999999976 57788 999987
Q ss_pred cCcchhhhHHHHhhhccc--------CCCCCCccHHHHHHHHHHHHHhcCH--------------hHHHHHHHHHHHHHH
Q 010058 310 QGQEVMYAYEDKINQAVF--------PGLQGGPHNHTISGLAVALKQVKTP--------------EYKAYQEQVLSNSSK 367 (519)
Q Consensus 310 ~g~~~~~~~~~~i~~~~~--------~~~~g~~~~~~iaal~~al~~~~~~--------------~~~~~~~~~~~~~~~ 367 (519)
++.+++..... ....++++...++++.++++..... .+++..+++.+++++
T Consensus 242 -------~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (406)
T 3cai_A 242 -------SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDY 314 (406)
T ss_dssp -------HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHH
Confidence 44443322210 0113677888888888888776542 367888999999999
Q ss_pred HHHHHHhc-CCEEecCC-CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCC---C-C-CCCCCeEEeccCcccc
Q 010058 368 FARSLLER-GYDLVSGG-TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD---V-S-AMVPGGIRMGTPALTS 440 (519)
Q Consensus 368 l~~~L~~~-g~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~---~-~-~~~~~~iRi~~~~~tt 440 (519)
+.+.|++. |+.++.+. ....++++.+. +.+..++.+.|.+.||.++... +.. . + +...+.+|++++..++
T Consensus 315 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~~gi~v~~g~-~~~~~~~~g~~~~~~~iRis~~~~~t 391 (406)
T 3cai_A 315 LMVSLRSLPLVMLIGRPEAQIPVVSFAVH--KVPADRVVQRLADNGILAIANT-GSRVLDVLGVNDVGGAVTVGLAHYST 391 (406)
T ss_dssp HHHHHHTCTTEEECCCCSSBCSEEEEEET--TBCHHHHHHHHHHTTEECEECC-SCHHHHHHTTTTTTCCEEEECCTTCC
T ss_pred HHHHHhcCCCeEEcCCccccCCEEEEEEC--CcCHHHHHHHHHHCCcEEecCC-hHHHHHHcCCCCCCCeEEEEeecCCC
Confidence 99999997 78776542 11223444432 4567888888988999997432 000 0 0 0124689999998888
Q ss_pred CCCCHHHHHHHHHHHHH
Q 010058 441 RGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 441 rg~~~~di~~l~~~l~~ 457 (519)
++|++++++.|++
T Consensus 392 ----~e~i~~~~~~l~~ 404 (406)
T 3cai_A 392 ----MAEVDQLVRALAS 404 (406)
T ss_dssp ----HHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHHH
Confidence 8999999998865
No 29
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.96 E-value=2.6e-28 Score=250.15 Aligned_cols=340 Identities=14% Similarity=0.103 Sum_probs=238.6
Q ss_pred cCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.|+|..+++ ++++.|.+++.+.+.+.. .+|+. . ..++++.+++++++.+|.+.+. .+|++++|++
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~--~~~l~~~la~~l~~~~g~~~~~--~~i~~~~g~~~ 96 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVAA-FGYES------V--PAEYYKAVADWEEIEHRARPKE--DWCVFASGVVP 96 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTCC-CCCBC------C--CHHHHHHHHHHHHHHHSCCCCG--GGEEEESCHHH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcCc-CCCCC------C--CHHHHHHHHHHHHHHhCCCCCH--HHEEECCCHHH
Confidence 5688877765 358999999999886521 12221 1 3577778889999999943221 3699999977
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
++..++.++++|||+|++.++.|.++... +...|..+..++++.+..++.+|++++++++++.++++|+++
T Consensus 97 a~~~~~~~l~~~gd~vl~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~ 168 (391)
T 3dzz_A 97 AISAMVRQFTSPGDQILVQEPVYNMFYSV--------IEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCN 168 (391)
T ss_dssp HHHHHHHHHSCTTCEEEECSSCCHHHHHH--------HHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEES
T ss_pred HHHHHHHHhCCCCCeEEECCCCcHHHHHH--------HHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEEC
Confidence 88889999999999999999887765432 223355555555432233456999999999984589999887
Q ss_pred ccc-cccc---ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-----CCe--EEEEcCCCcc--cCCCcceEE
Q 010058 233 ASA-YARL---YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-----YAD--VVTTTTHKSL--RGPRGAMIF 299 (519)
Q Consensus 233 ~sn-~g~~---~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-----~~d--i~~~S~~K~l--~GprgG~i~ 299 (519)
++| +|.. .++++|+++|++||+++|+|++|..+.. .+....++. ..| +++.|+||++ +|+|.|+++
T Consensus 169 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~ 247 (391)
T 3dzz_A 169 PHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVL-TDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAI 247 (391)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBC-SSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEE
T ss_pred CCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccC-CCCCceehhhcCccccCcEEEEEeChhhccccchhheEEE
Confidence 656 7777 5788999999999999999999864332 221111111 245 9999999985 677889999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CC
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GY 377 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~ 377 (519)
++++ ++.+.+.........++++...++++..+++.. ....++..+++.++++++.+.|++. |+
T Consensus 248 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 313 (391)
T 3dzz_A 248 IPNP-------------DLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG-HDWLRELKQVLRDNFAYAREFLAKEVPEV 313 (391)
T ss_dssp CCSH-------------HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred ECCH-------------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 9732 455544332211112344555566666666652 2346888899999999999999994 88
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
.+..+ ..+.+.++.+...+.+..++.+.| +++||.++ ||.. +....+.+||++. ++ +++++++++.|
T Consensus 314 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~~~~~~~~iRis~~--~~----~~~i~~~l~~l 382 (391)
T 3dzz_A 314 KVLDS-NASYLAWVDISALGMNAEDFCKYLREKTGLIIS----AGNGYRGNGHEFVRINLA--CP----KELVIDGMQRL 382 (391)
T ss_dssp EECCC-CBSSEEEEECGGGCSCHHHHHHHHHHHHCEECE----ESGGGCTTGGGEEEEECC--SC----HHHHHHHHHHH
T ss_pred EEecc-CceEEEEEehhhcCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEec--CC----HHHHHHHHHHH
Confidence 87654 334556677765456788888888 58999997 4432 2233578999987 45 79999999999
Q ss_pred HHHHHH
Q 010058 456 DAAVKL 461 (519)
Q Consensus 456 ~~~l~~ 461 (519)
.++++.
T Consensus 383 ~~~l~~ 388 (391)
T 3dzz_A 383 KQGVLN 388 (391)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 998863
No 30
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.96 E-value=3.8e-28 Score=247.98 Aligned_cols=342 Identities=16% Similarity=0.175 Sum_probs=238.5
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL 162 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al 162 (519)
+..++++.|++++.+.+.+.+ ++++..|..+ .........+++++++++|++++ +|++++|++ |+..++.++
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a~~~~~~~l 80 (382)
T 4eb5_A 8 SAKPVDERILEAMLPYMTESF--GNPSSVHSYG-FKAREAVQEAREKVAKLVNGGGG----TVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHH-HHHHHHHHHHHHHHHHHHTCTTE----EEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhcc--CCCCCCcHHH-HHHHHHHHHHHHHHHHHhCCCCC----eEEEcCchHHHHHHHHHHH
Confidence 334689999999999887633 4554423211 22334555677999999999763 588888776 888888888
Q ss_pred c----CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-c
Q 010058 163 L----KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-Y 236 (519)
Q Consensus 163 l----~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~ 236 (519)
. +|||+|++++++|.++....... ...|..+..++ ++ +++.+|++++++++++ ++++|+++ ++| +
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-----~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~npt 151 (382)
T 4eb5_A 81 AMRNARKGKHILVSAVEHMSVINPAKFL-----QKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEI 151 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHHHHHH-----TTTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTT
T ss_pred HhhccCCCCEEEECCCcchHHHHHHHHH-----HhCCcEEEEec--cC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCc
Confidence 7 89999999998887664322210 11244444444 44 3578999999999986 89998888 555 7
Q ss_pred cccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-ccCcch
Q 010058 237 ARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQGQEV 314 (519)
Q Consensus 237 g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~~g~~~ 314 (519)
|...|+++|.++|+++|++ |+|++|..|....++... ++|++++|+||+ .||.| |+++++++..+.+ ..|+..
T Consensus 152 G~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~---~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~~~~~~~~~ 226 (382)
T 4eb5_A 152 GTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKI---GADMLTISSNDI-YGPKGVGALWIRKEAKLQPVILGGGQ 226 (382)
T ss_dssp CBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHH---TCSEEEEETGGG-TCCSSCEEEEEETTCCCCCSSCSSCT
T ss_pred cccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCcccc---CCCEEEeehHHh-cCCCceEEEEEccccccCceecCCCc
Confidence 9999999999999999999 999999866443221111 579999999997 56765 9999887532222 111100
Q ss_pred hhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCC--Ccceeee
Q 010058 315 MYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGT--ENHLVLV 391 (519)
Q Consensus 315 ~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~--~~~~~~v 391 (519)
. .....++++...++++.++++.+.+ ++++..+++.++++++.+.|+++ |+.++.+.. ..+++++
T Consensus 227 ---------~--~~~~~~~~~~~~~~~~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T 4eb5_A 227 ---------E--NGLRSGSENVPSIVGFGKAAEITAM-EWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNV 294 (382)
T ss_dssp ---------G--GGTSCSCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEE
T ss_pred ---------c--ccccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEE
Confidence 0 0112356777777887778876543 57888999999999999999987 887765421 1334455
Q ss_pred eccCCCCcHHHHHHhhcccCeEEccccc--CCCC---------C---CCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 392 NLRNKGIDGSRVEKVLESVHIAANKNTV--PGDV---------S---AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 392 ~~~~~~~~~~~~~~~L~~~gI~v~~~~~--p~~~---------~---~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
.+. +.+..++.+.|.+.||.++.... +... + ....+.|||+++..++ ++|++++++.|.+
T Consensus 295 ~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~----~~~i~~~~~~l~~ 368 (382)
T 4eb5_A 295 RFS--YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNT----DEDVDRLLEVLPG 368 (382)
T ss_dssp EET--TSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCC----HHHHHHHHHHHHH
T ss_pred EeC--CcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCC----HHHHHHHHHHHHH
Confidence 443 45778888888889999973211 0000 0 0124789999887777 8999999999999
Q ss_pred HHHHHhh
Q 010058 458 AVKLALK 464 (519)
Q Consensus 458 ~l~~~~~ 464 (519)
+++...+
T Consensus 369 ~~~~~~~ 375 (382)
T 4eb5_A 369 VIERLRS 375 (382)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9876543
No 31
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.96 E-value=5.8e-28 Score=244.83 Aligned_cols=345 Identities=13% Similarity=0.103 Sum_probs=232.3
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANF 156 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~ 156 (519)
.+++.++...+++.|++++.+.+.+ +++ .+.......+++++++++|. ++.+ .++++++|++ |+.
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~~~----------~~~--~~~~~~~~~l~~~la~~~g~-~~~~-~~v~~~~g~t~a~~ 70 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDSCT----------WDD--DYNIGVVEQIRQQLTALATA-SEGY-TSVLLQGSGSYAVE 70 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCCT----------TSH--HHHTTTHHHHHHHHHHHHCS-SSSE-EEEEEESCHHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhhcC----------CCH--HHHHHHHHHHHHHHHHHhCC-CCcC-cEEEEecChHHHHH
Confidence 5788888777899999998764311 111 11101223444888899993 3211 2477777776 999
Q ss_pred HHHHhhcCCCCEEEEec-CCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-CCcEEEEc-c
Q 010058 157 QVYTALLKPHERIMALD-LPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-RPKLIVAG-A 233 (519)
Q Consensus 157 ~~~~all~pGD~Vl~~~-~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-k~klIi~~-~ 233 (519)
.++.++++|||+|++++ ..|++.+.. .+...|..+..++ ++ +++.+|++++++++++. ++++|+++ +
T Consensus 71 ~~~~~~~~~gd~vi~~~~~~~~~~~~~-------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~ 140 (366)
T 1m32_A 71 AVLGSALGPQDKVLIVSNGAYGARMVE-------MAGLMGIAHHAYD--CG-EVARPDVQAIDAILNADPTISHIAMVHS 140 (366)
T ss_dssp HHHHHSCCTTCCEEEEESSHHHHHHHH-------HHHHHTCCEEEEE--CC-TTSCCCHHHHHHHHHHCTTCCEEEEESE
T ss_pred HHHHHhcCCCCeEEEEeCCCccHHHHH-------HHHHhCCceEEEe--CC-CCCCCCHHHHHHHHhcCCCeEEEEEecc
Confidence 89999999999988775 344332111 1122344444554 34 35779999999999873 57888777 5
Q ss_pred cc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--cccc
Q 010058 234 SA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINK 309 (519)
Q Consensus 234 sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~ 309 (519)
+| +|...|+++|.++|+++|+++|+|++|..|....++... ++|++++|+||++.||.| |+++++++.. +.+.
T Consensus 141 ~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~ 217 (366)
T 1m32_A 141 ETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAAL---HIDYLISSANKCIQGVPGFAFVIAREQKLAACKGH 217 (366)
T ss_dssp ETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTT---TCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTC
T ss_pred cCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCcccccc---CccEEEecCcccccCCCceEEEEECHHHHHhhcCC
Confidence 55 799999999999999999999999999877654333222 579999999999988877 9999988421 0000
Q ss_pred cCcchhhhHHHHhhh--cccCCCCCCccHHHHHHHHHHHHHhcCHh-HHHHHHHHHHHHHHHHHHHHhcCCEEecCC--C
Q 010058 310 QGQEVMYAYEDKINQ--AVFPGLQGGPHNHTISGLAVALKQVKTPE-YKAYQEQVLSNSSKFARSLLERGYDLVSGG--T 384 (519)
Q Consensus 310 ~g~~~~~~~~~~i~~--~~~~~~~g~~~~~~iaal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~ 384 (519)
.....++....+.. .......++++...++++.++++.+...+ +++..++++++++++.+.|++.|+.++.+. .
T Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 296 (366)
T 1m32_A 218 -SRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELH 296 (366)
T ss_dssp -CSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGB
T ss_pred -CCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhc
Confidence 00000000000000 00011124677788888888888765544 788899999999999999999888766542 1
Q ss_pred CcceeeeeccC-CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 385 ENHLVLVNLRN-KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 385 ~~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.+.++++.+.. .+.+..++.+.|.+.||.++ |+.. ...+++|++++..++ ++|++++++.|+++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~----~~~~--~~~~~iRi~~~~~~~----~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 297 SPIITAFYSPEDPQYRFSEFYRRLKEQGFVIY----PGKV--SQSDCFRIGNIGEVY----AADITALLTAIRTAMY 363 (366)
T ss_dssp CSSEEEEECCCCTTCCHHHHHHHHHHTTEECE----ECCC--SSSCEEEEECCSSCC----HHHHHHHHHHHHHHCT
T ss_pred CceEEEEEcCccCCCCHHHHHHHHHHCCEEEE----CCcC--CCCCEEEEecCCCCC----HHHHHHHHHHHHHHHH
Confidence 23456666532 14567888888888899996 3332 135789999998877 8999999999988764
No 32
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.96 E-value=6.2e-28 Score=245.34 Aligned_cols=319 Identities=11% Similarity=0.032 Sum_probs=232.8
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..++|+ +++.|++++.+.+.+.. +|+.. .+ .+++ +.+++++|++++ +|.+++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~------~~-~~lr----~~la~~~~~~~~----~v~~~~g~~ 92 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAH--LYPDD------SM-IELK----STLAQKYKVQNE----NIIIGAGSD 92 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTT--SCCCT------TC-HHHH----HHHHHHHTCCGG----GEEEESSHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhc--cCCCC------Ch-HHHH----HHHHHHhCCCcc----eEEECCCHH
Confidence 467999988886 58999999999886422 44433 22 3455 778888998764 588988888
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||+|++.++.|.++.. .+...|..+..+++ +++++ +|++++++++++ ++++|+++
T Consensus 93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~~--~~~~~-~d~~~l~~~l~~-~~~~v~~~ 160 (365)
T 3get_A 93 QVIEFAIHSKLNSKNAFLQAGVTFAMYEI--------YAKQCGAKCYKTQS--ITHNL-DEFKKLYETHKD-EIKLIFLC 160 (365)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHHHTCEEEECSS--SSCCH-HHHHHHHHHTTT-TEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEEec--CCCCC-CCHHHHHHHhCC-CCCEEEEc
Confidence 8888999999999999999877765543 22234555555543 33567 999999999986 89999987
Q ss_pred -ccc-ccccccHHHHHHHHh--hcCCEEEehhhhhhhcc--ccCCCCCCC-----CCCeEEEEcCCCcc--cCCCcceEE
Q 010058 233 -ASA-YARLYDYARIRKVCD--KQKAVMLADMAHISGLV--AAGVIPSPF-----EYADVVTTTTHKSL--RGPRGAMIF 299 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~--~~~~~livD~ah~~g~~--~~~~~~~p~-----~~~di~~~S~~K~l--~GprgG~i~ 299 (519)
++| +|...|.+++.++++ ++|+++|+|++|..+.. ..+....++ ...++++.|+||++ +|.|.|+++
T Consensus 161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 240 (365)
T 3get_A 161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240 (365)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence 777 899999988888888 67999999999874432 211111111 13578899999986 677889999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
+++ ++.+.+.....+ .+++....+++..+++.. ..+++..+++.++++++.+.|++.|+.+
T Consensus 241 ~~~--------------~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 301 (365)
T 3get_A 241 ANA--------------NIISAFYKLRAP---FNVSNLALKAAVAAMDDD--EFTEKTLENNFSQMELYKEFAKKHNIKI 301 (365)
T ss_dssp ECH--------------HHHHHHHHHSCT---TCSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred cCH--------------HHHHHHHHhcCC---CCcCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 976 566655544332 245666666666676632 4568889999999999999999999887
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
..+ ...++++.+... +..++.+.|.++||.++ |+.... ++++|+++. + ++|++++++.|++++
T Consensus 302 ~~~--~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~----~g~~~~--~~~iRis~~---~----~~~i~~l~~~l~~~l 364 (365)
T 3get_A 302 IDS--YTNFITYFFDEK--NSTDLSEKLLKKGIIIR----NLKSYG--LNAIRITIG---T----SYENEKFFTEFDKIL 364 (365)
T ss_dssp CCC--SSSEEEEECSSS--CHHHHHHHHHTTTEECE----ECGGGT--CSEEEEECC---C----HHHHHHHHHHHHHHH
T ss_pred CCC--CCeEEEEECCCC--CHHHHHHHHHHCCEEEE----ECccCC--CCEEEEEcC---C----HHHHHHHHHHHHHHh
Confidence 653 234566666432 67888888988999997 333211 578999975 4 799999999998875
No 33
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=3.1e-27 Score=241.99 Aligned_cols=330 Identities=13% Similarity=0.103 Sum_probs=233.6
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQ 157 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~ 157 (519)
..+.....++++.+.+++.+.+.+.+ +++. ......++++.+++++++++|++++ +|++++|++ |+..
T Consensus 33 ~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~~-----~~~~~~~~~~~l~~~la~~~~~~~~----~i~~~~ggt~a~~~ 101 (397)
T 3f9t_A 33 NIFGSMCSNVLPITRKIVDIFLETNL--GDPG-----LFKGTKLLEEKAVALLGSLLNNKDA----YGHIVSGGTEANLM 101 (397)
T ss_dssp CBCSCSCCCCCTHHHHHHHHHTTCCT--TSGG-----GBHHHHHHHHHHHHHHHHHTTCTTC----EEEEESCHHHHHHH
T ss_pred CeEEEecCCCcHHHHHHHHHHHhhcC--CCcc-----cChhHHHHHHHHHHHHHHHhCCCCC----CEEEecCcHHHHHH
Confidence 34445555678899999998876533 2221 1234567778888999999999874 577777776 9888
Q ss_pred HHHhhcCC-------------CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh
Q 010058 158 VYTALLKP-------------HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 158 ~~~all~p-------------GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~ 224 (519)
++.++..+ ||+|++.++.|.++.. .+...|..+..++ .+ +++.+|++++++++++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~ 170 (397)
T 3f9t_A 102 ALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEK--------GREMMDLEYIYAP--IK-EDYTIDEKFVKDAVEDY 170 (397)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHH--------HHHHHTCEEEEEC--BC-TTSSBCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHH--------HHHHcCceeEEEe--eC-CCCcCCHHHHHHHHhhc
Confidence 88888766 9999999988877543 2233455555555 44 35889999999999865
Q ss_pred CCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC-------CCCCC---CCeEEEEcCCCcccC
Q 010058 225 RPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI-------PSPFE---YADVVTTTTHKSLRG 292 (519)
Q Consensus 225 k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-------~~p~~---~~di~~~S~~K~l~G 292 (519)
++++|+++ ++| +|...|+++|.++|++||+++|+|++|..+.....-. ..++. ++|++++|+||++.+
T Consensus 171 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~ 250 (397)
T 3f9t_A 171 DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHC 250 (397)
T ss_dssp CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCC
T ss_pred CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCC
Confidence 78888887 666 8899999999999999999999999987654422110 01111 579999999999854
Q ss_pred C-CcceEEeecccccccccCcchhhhHHHHhhhc--ccC-----CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHH
Q 010058 293 P-RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--VFP-----GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSN 364 (519)
Q Consensus 293 p-rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~~-----~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~ 364 (519)
+ +.|+++++++ .+.+.+... .+. ...++++...+.++.+++..+...++++..+++.++
T Consensus 251 ~~~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 317 (397)
T 3f9t_A 251 PIPSGGILFKDI-------------GYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMEN 317 (397)
T ss_dssp CSSCEEEEESSG-------------GGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEeCH-------------HHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4 5688888764 222222110 000 011333333455556666666566778899999999
Q ss_pred HHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCC
Q 010058 365 SSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFV 444 (519)
Q Consensus 365 ~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~ 444 (519)
++++.+.|++.|+.++.++ ..+++++.+. +..++.+.|.+.||.++ |+.. ++++||+++..++
T Consensus 318 ~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~----~~~~~~~~l~~~gi~v~----~~~~----~~~~Ri~~~~~~~---- 380 (397)
T 3f9t_A 318 TLYLYKKLKENNFKPVIEP-ILNIVAIEDE----DYKEVCKKLRDRGIYVS----VCNC----VKALRIVVMPHIK---- 380 (397)
T ss_dssp HHHHHHHHHHTTCCBSSCC-SSSEEEEECT----THHHHHHHHHHTTCBCE----ECSS----SSEEEEECCTTCC----
T ss_pred HHHHHHHHHHCCCEEEcCC-CccEEEEEeC----CHHHHHHHHHhCCeEEe----ccCC----CCEEEEEEcCCCC----
Confidence 9999999999988866553 3445555543 26778888888899987 3321 4789999987777
Q ss_pred HHHHHHHHHHHHHHHH
Q 010058 445 EEDFEKVAEFFDAAVK 460 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~ 460 (519)
++|++++++.|+++++
T Consensus 381 ~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 381 REHIDNFIEILNSIKR 396 (397)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhhC
Confidence 8999999999988764
No 34
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.96 E-value=8.8e-28 Score=245.30 Aligned_cols=341 Identities=17% Similarity=0.219 Sum_probs=235.0
Q ss_pred eeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHH
Q 010058 79 LELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANF 156 (519)
Q Consensus 79 i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~ 156 (519)
+.|..+.+ ++++.|++++.+.+.+.| +.|+..+..+ .........+++++++++|++++ +|++++|++ |+.
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a~~ 75 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKY--GNPNSAHGMG-IEANLHMEKAREKVAKVLGVSPS----EIFFTSCATESIN 75 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCC--CCTTCSSHHH-HHHHHHHHHHHHHHHHHHTSCGG----GEEEESCHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcC--CCCccccHHH-HHHHHHHHHHHHHHHHHcCCCCC----eEEEECCHHHHHH
Confidence 34544333 679999999999887644 3333211111 11223334556899999998764 488888877 888
Q ss_pred HHHHhhc----CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 157 QVYTALL----KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 157 ~~~~all----~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
.++.++. +|||+|+++++.|.++..... .+...|..+..+ +.+ +++.+|++++++++++ ++++|+++
T Consensus 76 ~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~~~-~~~~~d~~~l~~~i~~-~~~~v~~~ 146 (384)
T 1eg5_A 76 WILKTVAETFEKRKRTIITTPIEHKAVLETMK-----YLSMKGFKVKYV--PVD-SRGVVKLEELEKLVDE-DTFLVSIM 146 (384)
T ss_dssp HHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-----HHHHTTCEEEEC--CBC-TTSCBCHHHHHHHCCT-TEEEEEEE
T ss_pred HHHHhhhhhccCCCCEEEECCCCchHHHHHHH-----HHHhcCCEEEEE--ccC-CCCccCHHHHHHHhCC-CCeEEEEE
Confidence 8888887 899999999987766543221 011224444444 444 3578999999999987 89999988
Q ss_pred -ccc-ccccccHHHHHHHHhhcC--CEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQK--AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 307 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~~--~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~ 307 (519)
++| +|...|+++|.++|+++| +++|+|++|..|....++... ++|++++|+||+ .|+.| |++++++++++.
T Consensus 147 ~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~---~~di~~~s~sK~-~g~~G~G~~~~~~~~~~~ 222 (384)
T 1eg5_A 147 AANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKL---EVDYASFSAHKF-HGPKGVGITYIRKGVPIR 222 (384)
T ss_dssp SBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTT---CCSEEEEEGGGG-TSCTTCEEEEECTTSCCC
T ss_pred CCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhc---CCCEEEecHHHh-cCCCceEEEEEcCCCccc
Confidence 555 789999999999999999 999999999866543332222 589999999997 46665 999998853111
Q ss_pred c-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCC-
Q 010058 308 N-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTE- 385 (519)
Q Consensus 308 ~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~- 385 (519)
+ ..+... ......++++...++++..+++... ..+++..+++.++++++.+.|.+.|++++.+...
T Consensus 223 ~~~~~~~~-----------~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 290 (384)
T 1eg5_A 223 PLIHGGGQ-----------ERGLRSGTQNVPGIVGAARAMEIAV-EELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEIS 290 (384)
T ss_dssp CSBCSSCT-----------TTTTBCSCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSB
T ss_pred cccccCcc-----------cccccCCCCChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccC
Confidence 1 111000 0011235677777777778887643 3578889999999999999999888887654211
Q ss_pred -cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CC-----------------CCCCeEEeccCccccCCCCHH
Q 010058 386 -NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SA-----------------MVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 386 -~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~-----------------~~~~~iRi~~~~~ttrg~~~~ 446 (519)
.....+.+. +.+..++.+.|.+.||.++ ||.. ++ ...+.+||+++..++ ++
T Consensus 291 ~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~----~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~----~~ 360 (384)
T 1eg5_A 291 LPNTLSVSFP--NIRGSTLQNLLSGYGIYVS----TSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNT----EE 360 (384)
T ss_dssp CTTEEEEECT--TCCHHHHHHHHHHTTEECB----C------------CHHHHTTCCHHHHHHEEEEECCTTCC----HH
T ss_pred CCCEEEEEeC--CCCHHHHHHHHhhCCeEEe----ccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCC----HH
Confidence 223333332 4567888889989999997 3321 10 013689999987777 89
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVKL 461 (519)
Q Consensus 447 di~~l~~~l~~~l~~ 461 (519)
|++++++.|+++++.
T Consensus 361 ~i~~~~~~l~~~~~~ 375 (384)
T 1eg5_A 361 EVDYFLKKIEEILSF 375 (384)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998864
No 35
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.96 E-value=1.5e-27 Score=244.88 Aligned_cols=353 Identities=10% Similarity=0.038 Sum_probs=237.2
Q ss_pred HHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC
Q 010058 62 PEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDP 139 (519)
Q Consensus 62 ~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~ 139 (519)
.+++....+.....++.|+|..+++. +++.|.+++.+.+.+.. .+| +...+..++++.+.+++.+.+|.+.
T Consensus 17 ~~~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~lr~~ia~~~~~~~g~~~ 89 (391)
T 3h14_A 17 MDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LGY------TVALGLPALRQRIARLYGEWYGVDL 89 (391)
T ss_dssp HHHHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC-----------------CCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCChHHHHHHHHHHHHHHhCCCC
Confidence 34444444444445678999888874 47889999998876521 123 3333456788777788888888543
Q ss_pred CCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHH
Q 010058 140 AKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 140 ~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~ 218 (519)
+. .+|++++|++ |+..++.++++|||+|++.++.|.++.. .+...|..+..+++..+ .++.+|+++++
T Consensus 90 ~~--~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~ 158 (391)
T 3h14_A 90 DP--GRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQ--------ILRALGLVPVDLPTAPE-NRLQPVPADFA 158 (391)
T ss_dssp CG--GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEECCGG-GTTSCCHHHHT
T ss_pred CH--HHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEeecCcc-cCCCCCHHHHH
Confidence 22 3689999887 8888999999999999999977766543 22234555555554321 24578999998
Q ss_pred HHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC--CCCCeEEEEcCCCcc-
Q 010058 219 KSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP--FEYADVVTTTTHKSL- 290 (519)
Q Consensus 219 ~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p--~~~~di~~~S~~K~l- 290 (519)
++ ++++|+++ ++| +|...+ +++|.++|+++|+++|+|++|..... .+..... +...++++.|++|++
T Consensus 159 ~~----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g 233 (391)
T 3h14_A 159 GL----DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEY-EAKAVTALELTDECYVINSFSKYFS 233 (391)
T ss_dssp TS----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCGGGTCSSSEEEEESSSTTC
T ss_pred hc----CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhccc-CCCCcChhhcCCCEEEEEechhccC
Confidence 75 78988887 666 787776 88899999999999999999764322 2211111 124568899999987
Q ss_pred -cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Q 010058 291 -RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369 (519)
Q Consensus 291 -~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~ 369 (519)
.|.|.|++++++ ++.+.+....... .++++....+++.++++ ....+++..+++.++++.+.
T Consensus 234 ~~G~r~G~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~ 296 (391)
T 3h14_A 234 MTGWRVGWMVVPE--------------DQVRVVERIAQNM-FICAPHASQVAALAALD--CDAELQANLDVYKANRKLML 296 (391)
T ss_dssp CTTSCCEEEECCG--------------GGHHHHHHHHHHT-TCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHH
T ss_pred CccceeEEEEeCH--------------HHHHHHHHHHhhh-ccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHH
Confidence 577789999987 4444443322221 23445555555555555 33456888899999999999
Q ss_pred HHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHH
Q 010058 370 RSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF 448 (519)
Q Consensus 370 ~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di 448 (519)
+.|++.|+..+..+..+.+.++.+...+.+..++.+.|. ++||.++.....+. +..++++||++.. + ++|+
T Consensus 297 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~~~~iRis~~~--~----~~~i 368 (391)
T 3h14_A 297 ERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP--ERGAGTLRFSYAR--A----TADI 368 (391)
T ss_dssp HHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT--TTGGGEEEEECCS--C----HHHH
T ss_pred HHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCC--CCCCCeEEEEecC--C----HHHH
Confidence 999998776544434456667777544567778877654 46999973221111 1346789999875 4 7999
Q ss_pred HHHHHHHHHHHHHH
Q 010058 449 EKVAEFFDAAVKLA 462 (519)
Q Consensus 449 ~~l~~~l~~~l~~~ 462 (519)
+++++.|.+++...
T Consensus 369 ~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 369 EEGLDRLEAFMQAR 382 (391)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988753
No 36
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.96 E-value=2.8e-28 Score=249.70 Aligned_cols=347 Identities=15% Similarity=0.124 Sum_probs=238.0
Q ss_pred cCeeecCCC-CCCcHHHHHHHhhHhhhccCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~e-n~~~~~V~ea~~~~l~~~~~~g~p~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.+.|..+. .++++.|++++.+.+.+.. ...+.. +.|.. .......+++.+++++|++++ +|.+++|++
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~~---~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~ 87 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQ-ENGPFSIAANQH---IQQLIAQLRQALAETFNVDPN----TITITDNVTT 87 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHH-HHCSSSHHHHHH---HHHHHHHHHHHHHHHTTSCGG----GEEEESSHHH
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHh-ccCCcchhhHHH---HHHHHHHHHHHHHHHcCCCHH----HEEEeCChHH
Confidence 346665443 3567889999999886521 011110 11211 113334556899999998764 488887776
Q ss_pred HHHHHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 ANFQVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 a~~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++ ++|||+|+++++.|.++...... .....|..+..++.+.+ +++.+|++++++.+++ ++++|+++
T Consensus 88 a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~----~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~-~~~~v~~~ 161 (390)
T 1elu_A 88 GCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQA----IAARFGITYRFFPVAAT-LNQGDAAAVLANHLGP-KTRLVILS 161 (390)
T ss_dssp HHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHH----HHHHHCCEEEEECCGGG-SSSSCHHHHHHTTCCT-TEEEEEEE
T ss_pred HHHHHHhCCCCCCCCEEEEecCcccHHHHHHHH----HHHHhCcEEEEEcCCCC-CCccchHHHHHHhcCC-CceEEEEe
Confidence 888899999 89999999999888776432110 01123444445543211 3578999999999886 89999888
Q ss_pred -ccc-ccccccHHHHHHHHh----hcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc
Q 010058 233 -ASA-YARLYDYARIRKVCD----KQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK 305 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~----~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~ 305 (519)
++| +|...|+++|.++|+ ++|+++|+|++|..|....++... ++|++++|+||++.|+.| |++++++++.
T Consensus 162 ~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~---~~d~~~~s~~K~~~~~~g~G~~~~~~~~~ 238 (390)
T 1elu_A 162 HLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRL---EVDYYAFTGHKWFAGPAGVGGLYIHGDCL 238 (390)
T ss_dssp SBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTS---CCSEEEEESSSTTCCCTTCEEEEECTTTG
T ss_pred ccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhc---CCCEEEccccccccCCCceEEEEECHHhH
Confidence 555 789999999999999 999999999999877554333222 579999999998777766 9999988531
Q ss_pred --ccc-ccCcch-h-------hhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh-HHHHHHHHHHHHHHHHHHHH
Q 010058 306 --EIN-KQGQEV-M-------YAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE-YKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 306 --~~~-~~g~~~-~-------~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~ 373 (519)
+.+ ..|+.. . +.+.+.. ..+ ..++++...++++.++++.+...+ +++..+++.++++++.+.|+
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~ 314 (390)
T 1elu_A 239 GEINPTYVGWRSITYGAKGEPTGWAEGG--KRF--EVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLN 314 (390)
T ss_dssp GGCCCCSCCTTTEEECTTSCEEEECSGG--GGG--CCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCccccCCcccccccCcccccccch--Hhh--CCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 122 111110 0 0000000 011 235677777787777887665444 78889999999999999999
Q ss_pred hc-CCEEecC-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 374 ER-GYDLVSG-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 374 ~~-g~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
++ |+.++.+ .....++++.+. .+.+..++.+.|.+.||.++ |+. .++++||+++..++ ++|++++
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~----~~~----~~~~iRis~~~~~~----~~~i~~~ 381 (390)
T 1elu_A 315 QLPHVHCLATSAPQAGLVSFTVD-SPLGHRAIVQKLEEQRIYLR----TIA----DPDCIRACCHYITD----EEEINHL 381 (390)
T ss_dssp HSTTEEESCSSCCSSSEEEEEEC-SSSCHHHHHHHHHHTTEECE----EET----TTTEEEEECCTTCC----HHHHHHH
T ss_pred hcCCcEEecCccccccEEEEEcC-CCCCHHHHHHHHHHCCEEEE----ecC----CCCeEEEecccCCC----HHHHHHH
Confidence 98 8888753 233455666653 34567888888888999997 332 24689999987777 8999999
Q ss_pred HHHHHH
Q 010058 452 AEFFDA 457 (519)
Q Consensus 452 ~~~l~~ 457 (519)
++.|++
T Consensus 382 ~~~l~~ 387 (390)
T 1elu_A 382 LARLAD 387 (390)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 998864
No 37
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.96 E-value=1.9e-27 Score=243.79 Aligned_cols=333 Identities=16% Similarity=0.114 Sum_probs=231.0
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..+++. +++.+.+++.+.+.+.. .+| +...+..++++.+.+++.+.+|++.+. .+|++++|++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~g~~ 101 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALAQGK-TKY------APPAGIPELREALAEKFRRENGLSVTP--EETIVTVGGS 101 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHHHHHTTCCCCCG--GGEEEESHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCCHHHHHHHHHHHHHHhCCCCCh--HHEEEcCChH
Confidence 467899877773 47899999988876522 123 333445678878878888878864322 3699999988
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
++..++.++++|||+|+++++.|.++.. .+...|..+..++ .++ +++.+|++++++++++ ++++|++
T Consensus 102 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 170 (385)
T 1b5p_A 102 QALFNLFQAILDPGDEVIVLSPYWVSYPE--------MVRFAGGVVVEVE--TLPEEGFVPDPERVRRAITP-RTKALVV 170 (385)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCGGGTTCCCHHHHHTTCCT-TEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEee--cCcccCCCCCHHHHHHhcCC-CCEEEEE
Confidence 8888999999999999999987766543 2223455555555 443 3568999999999876 7898888
Q ss_pred c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC----CCeEEEEcCCCcc--cCCCcceEEe
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE----YADVVTTTTHKSL--RGPRGAMIFF 300 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~----~~di~~~S~~K~l--~GprgG~i~~ 300 (519)
+ ++| +|..++ +++|.++|+++|++||+|++|..... .+ ...++. ..++++.|+||++ +|.|.|++++
T Consensus 171 ~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-~~-~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~ 248 (385)
T 1b5p_A 171 NSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLY-EG-EHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACG 248 (385)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SS-CCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEEC
T ss_pred eCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhccc-CC-CCCCHHHcCCCCEEEEEechhhcCCcccceEEEEe
Confidence 7 767 887655 88999999999999999999764322 12 111111 3578899999986 5788899999
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHH---hcCHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ---VKTPEYKAYQEQVLSNSSKFARSLLERGY 377 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 377 (519)
++ ++.+.+......+.. +++.....++..+++. . ...+++..+++.++++.+.+.|++.|+
T Consensus 249 ~~--------------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~ 312 (385)
T 1b5p_A 249 PK--------------EVIKAMASVSRQSTT-SPDTIAQWATLEALTNQEAS-RAFVEMAREAYRRRRDLLLEGLTALGL 312 (385)
T ss_dssp CH--------------HHHHHHHHHHHTTTC-SCCHHHHHHHHHHHHCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CH--------------HHHHHHHHHHhhccC-CCCHHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 87 455544433222222 3344444444456643 2 234677888999999999999998888
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
.+..+ ..+++.|+.+...+.+..++.+.|.++||.+. ||.. +. ++++||++. ++ ++++++.++.|.
T Consensus 313 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~----~g~~f~~--~~~iRis~~--~~----~~~i~~~l~~l~ 379 (385)
T 1b5p_A 313 KAVRP-SGAFYVLMDTSPIAPDEVRAAERLLEAGVAVV----PGTDFAA--FGHVRLSYA--TS----EENLRKALERFA 379 (385)
T ss_dssp CBCCC-SBTTEEEEECTTTCSSHHHHHHHHHHTTEECE----ESGGGTC--TTEEEEECC--SC----HHHHHHHHHHGG
T ss_pred eecCC-CeeEEEEEecCCCCCCHHHHHHHHHHCCeEEe----cccccCC--CCeEEEEec--CC----HHHHHHHHHHHH
Confidence 76553 33455666664335677888888889999997 4433 21 578999976 45 788888887776
Q ss_pred HHH
Q 010058 457 AAV 459 (519)
Q Consensus 457 ~~l 459 (519)
+++
T Consensus 380 ~~l 382 (385)
T 1b5p_A 380 RVL 382 (385)
T ss_dssp GGC
T ss_pred HHH
Confidence 654
No 38
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.96 E-value=1.7e-27 Score=244.03 Aligned_cols=335 Identities=13% Similarity=0.136 Sum_probs=237.4
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ--LDPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g--~~~~~~~~~V~~~sG 151 (519)
.+.|+|..+++. +++.|.+++.+.+.+.. .+|+ . +..++++.+++++++.+| ++++ +|++++|
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~------~--~~~~~~~~l~~~l~~~~g~~~~~~----~v~~~~g 98 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQEI-YGYT------T--RPDSYNESIVNWLYRRHNWKIKSE----WLIYSPG 98 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCB------C--CCHHHHHHHHHHHHHHHCCCCCGG----GEEEESC
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhCCC-CCCC------C--CCHHHHHHHHHHHHHHhCCCCcHH----HeEEcCC
Confidence 567899877773 57999999999886521 1221 1 225677788899999999 4553 5888888
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeee-eCCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR-LDESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~-~d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
++ ++..++.++++|||+|++.++.|.++... +...|..+..+++. .+..++.+|++++++++++ +++|
T Consensus 99 ~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v 168 (391)
T 4dq6_A 99 VIPAISLLINELTKANDKIMIQEPVYSPFNSV--------VKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLF 168 (391)
T ss_dssp HHHHHHHHHHHHSCTTCEEEECSSCCTHHHHH--------HHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEE
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHH--------HHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEE
Confidence 88 88889999999999999999777665432 22335555555543 2234467999999999986 8888
Q ss_pred EEc-ccc-cccc---ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-------CCeEEEEcCCCcc--cCCCc
Q 010058 230 VAG-ASA-YARL---YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-------YADVVTTTTHKSL--RGPRG 295 (519)
Q Consensus 230 i~~-~sn-~g~~---~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-------~~di~~~S~~K~l--~Gprg 295 (519)
+++ ++| +|.. .++++|+++|+++|+++|+|++|.... ..+....++. ...+++.|+||++ +|.|.
T Consensus 169 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~ 247 (391)
T 4dq6_A 169 ILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDII-LKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQS 247 (391)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB-CTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCC
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccc-cCCCCccCHHHcCccccCcEEEEEechhhccCcccce
Confidence 887 666 7776 568899999999999999999986433 2222222221 1238899999986 67788
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
|+++++++ ++.+.+.........++++...++++.++++.. ....++..+++.++++.+.+.|++.
T Consensus 248 G~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~ 313 (391)
T 4dq6_A 248 SYVVLPDE-------------KDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG-ESWLESFLEYLESNIDFAIKYINEN 313 (391)
T ss_dssp EEEECCSH-------------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCH-------------HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99998863 344444333222223466777777777777753 2346788899999999999999984
Q ss_pred --CCEEecCCCCcceeeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 376 --GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 376 --g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
|+.++.+ ..+.+.++++...+.+..++.+.|.+. ||.++ ||.. +....+.+|++++ ++ +++++++
T Consensus 314 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~~~~~~~~iRis~~--~~----~~~i~~~ 382 (391)
T 4dq6_A 314 MPKLKVRKP-EGTYLLWVDFSALGLSDEELESILVQKGKVALN----QGNSFGIGGSGYQRINLA--CP----RSMLEEA 382 (391)
T ss_dssp CTTSEECCC-SBSSEEEEECGGGCCCHHHHHHHHHHTTCEECE----EGGGGCTTCTTEEEEECC--SC----HHHHHHH
T ss_pred CCCCEecCC-CccEEEEEEhhhcCCCHHHHHHHHHHhCCEEee----CchhhCCCCCCeEEEEEc--CC----HHHHHHH
Confidence 8887654 334555677754456788888888776 99997 3332 2234678999987 45 7999999
Q ss_pred HHHHHHHH
Q 010058 452 AEFFDAAV 459 (519)
Q Consensus 452 ~~~l~~~l 459 (519)
++.|.+++
T Consensus 383 l~~l~~~l 390 (391)
T 4dq6_A 383 LIRIKNAI 390 (391)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998875
No 39
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.96 E-value=1.6e-27 Score=243.50 Aligned_cols=336 Identities=13% Similarity=0.147 Sum_probs=234.7
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ--LDPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g--~~~~~~~~~V~~~sG 151 (519)
++.|+|..+++. +++.|.+++.+.+.+.. .+|+.. ..++++.+++++++.+| +++ .+|++++|
T Consensus 24 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~----~~v~~~~g 90 (383)
T 3kax_A 24 EELIHAWIADMDFEVPQPIQTALKKRIEHPI-FGYTLP--------PENIGDIICNWTKKQYNWDIQK----EWIVFSAG 90 (383)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCC-CCCCCC--------CTTHHHHHHHHHHHHHCCCCCG----GGEEEESC
T ss_pred CCeeecccccCCCCCCHHHHHHHHHHHhcCC-CCCCCC--------CHHHHHHHHHHHHHHhCCCCCh----hhEEEcCC
Confidence 356888877764 58999999999887521 133321 24566777799999999 444 35889998
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
++ ++..++.++++|||+|++.++.|.++.. .+...|..+..+++..+..++.+|++++++++.. ++++|+
T Consensus 91 ~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~ 161 (383)
T 3kax_A 91 IVPALSTSIQAFTKENESVLVQPPIYPPFFE--------MVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ-GVKLML 161 (383)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECSSCCHHHHH--------HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT-TCCEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc-CCeEEE
Confidence 88 8888999999999999999977766543 2223455555555433222356999999999965 899998
Q ss_pred Ec-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-------CCeEEEEcCCCcc--cCCCcc
Q 010058 231 AG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-------YADVVTTTTHKSL--RGPRGA 296 (519)
Q Consensus 231 ~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-------~~di~~~S~~K~l--~GprgG 296 (519)
++ ++| +|...+ +++|+++|+++|+++|+|++|..... .+....++. ..++++.|+||++ +|.|.|
T Consensus 162 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 240 (383)
T 3kax_A 162 LCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIY-ADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQAS 240 (383)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC-TTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCE
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEcccccccc-CCCCceeHhhcCccccCcEEEEEEChhhccCcchhhe
Confidence 88 666 787766 55666679999999999999864332 221111111 3458899999986 567779
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER- 375 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 375 (519)
+++++++ ++.+.+.........++++...++++..+++.. ....++..+++.++++.+.+.|++.
T Consensus 241 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~ 306 (383)
T 3kax_A 241 IIIIPNE-------------KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC-NDWLNEIRFYIEDNAKFACEYIKDHI 306 (383)
T ss_dssp EEECCCH-------------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC-HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCH-------------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9988542 455544433222223466777766666666542 2335788889999999999999985
Q ss_pred -CCEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHH
Q 010058 376 -GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVA 452 (519)
Q Consensus 376 -g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~ 452 (519)
|+.++.+ ..+.+.++++...+.+..++.+.|. ++||.++ ||.. +....+++|+++. ++ ++++++++
T Consensus 307 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~~~~~~~~iRi~~~--~~----~~~i~~~l 375 (383)
T 3kax_A 307 PTLSVMKP-EGSFLLWIDCSALNLSQDERTKLLEEKGKIIVE----PGEKYGLGGEEHIGINIG--CP----RSVLEEIL 375 (383)
T ss_dssp TTCEECCC-SBSSEEEEECGGGCCCHHHHHHHHHHTSCEECE----ESGGGCTTCTTEEEEECS--SC----HHHHHHHH
T ss_pred CCceEecC-CceEEEEEEccccCCCHHHHHHHHHhhCCEEeE----CchhhcCCCCCeEEEEEc--CC----HHHHHHHH
Confidence 8887654 3345556777655667888888886 7999997 4432 2234688999977 35 79999999
Q ss_pred HHHHHHH
Q 010058 453 EFFDAAV 459 (519)
Q Consensus 453 ~~l~~~l 459 (519)
+.|.+++
T Consensus 376 ~~l~~~l 382 (383)
T 3kax_A 376 NRLRHTF 382 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998775
No 40
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.96 E-value=4.2e-27 Score=244.77 Aligned_cols=335 Identities=17% Similarity=0.164 Sum_probs=237.0
Q ss_pred CeeecCCCC---CCcHHHHHHHhhHhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 78 GLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 78 ~i~L~a~en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~-~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.|+|..+++ ..++.|.+++.+.+.. +..++++.++..| .+...+++ +++++++|++. .++++||+.
T Consensus 66 ~id~~~~~~lg~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~~~~~~l~----~~la~~~g~~~-----~i~~~sGs~ 135 (427)
T 2w8t_A 66 TILLGTYNYMGMTFDPDVIAAGKEALEK-FGSGTCGSRMLNGTFHDHMEVE----QALRDFYGTTG-----AIVFSTGYM 135 (427)
T ss_dssp EEECSCCCTTCGGGCHHHHHHHHHHHHH-HCSCCCSCTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEEECcccccCCCCHHHHHHHHHHHHH-hCCCCcccccccCCcHHHHHHH----HHHHHHhCCCc-----eEEecCcHH
Confidence 467776653 2678999999998865 4335555544333 34455555 88888888863 599999999
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh---CCcEEE
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF---RPKLIV 230 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~---k~klIi 230 (519)
|+..++.++++|||.|++..+.|+++.. .+...|..+..++ .+|++++++++++. ++++|+
T Consensus 136 a~~~al~~l~~~gd~vl~~~~~h~~~~~--------~~~~~g~~~~~~~--------~~d~~~le~~l~~~~~~~~~~v~ 199 (427)
T 2w8t_A 136 ANLGIISTLAGKGEYVILDADSHASIYD--------GCQQGNAEIVRFR--------HNSVEDLDKRLGRLPKEPAKLVV 199 (427)
T ss_dssp HHHHHHHHHSCTTCEEEEETTCCHHHHH--------HHHHSCSEEEEEC--------TTCHHHHHHHHHTSCSSSCEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCCeeEEeC--------CCCHHHHHHHHHhccCCCCeEEE
Confidence 9998999999999999999988877653 2233344333332 36899999998764 688998
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhcccc---CCCC-CCC-CCCeEEEEcCCCcccCCCcceEEeecc
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAA---GVIP-SPF-EYADVVTTTTHKSLRGPRGAMIFFRKG 303 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~---~~~~-~p~-~~~di~~~S~~K~l~GprgG~i~~~~~ 303 (519)
++ +.| +|...|+++|+++|+++|+++|+|++|..|.... +... ..+ +++|++++|+||+++ ++||+++++++
T Consensus 200 ~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~gG~v~~~~~ 278 (427)
T 2w8t_A 200 LEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TVGGFVVSNHP 278 (427)
T ss_dssp EESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SCCEEEEECCT
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cCCCEEEeCHH
Confidence 88 444 7899999999999999999999999998766541 0000 011 157999999999985 77899999874
Q ss_pred cccccccCcchhhhHHHHhhhcccCC-CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPG-LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~-~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
+.+.+.....+. ..++++...++++.++++.+.. .++..+++.++++++.+.|++.|+.+..+
T Consensus 279 --------------l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 342 (427)
T 2w8t_A 279 --------------KFEAVRLACRPYIFTASLPPSVVATATTSIRKLMT--AHEKRERLWSNARALHGGLKAMGFRLGTE 342 (427)
T ss_dssp --------------TGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTS--CHHHHHHHHHHHHHHHHHHHHHTCEESCS
T ss_pred --------------HHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCcccCC
Confidence 333332210000 1245566677777678877643 57788999999999999999989887633
Q ss_pred CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 383 GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 383 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.....++++.+.. +.+..++.+.|.+.||.+.....|+. +...+.+|++++..++ ++|++++++.|.++++..
T Consensus 343 ~~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~--~~~~~~lRi~~~~~~t----~e~i~~~~~~l~~~l~~~ 415 (427)
T 2w8t_A 343 TCDSAIVAVMLED-QEQAAMMWQALLDGGLYVNMARPPAT--PAGTFLLRCSICAEHT----PAQIQTVLGMFQAAGRAV 415 (427)
T ss_dssp SCCSSEEEEEESS-HHHHHHHHHHHHHTTEECEEECTTTS--CTTCEEEEEECCTTCC----HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEECC-HHHHHHHHHHHHHCCeEEeeeCCCCC--CCCCeEEEEEeCCCCC----HHHHHHHHHHHHHHHHHh
Confidence 2134566666532 22456677888788999975433321 2234689999988777 899999999999998654
No 41
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=1.9e-27 Score=240.87 Aligned_cols=343 Identities=11% Similarity=0.041 Sum_probs=235.5
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
+.+.+.++...+++.|++++.+.+.+... ++. . . .....++.+.+++++++++|++.. .+|.+++|++ ++
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~~-~---~-~~~~~~~~~~~~~~la~~~g~~~~---~~v~~~~g~t~al 74 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIG-VIS-H---R-SKKFEEVYKTASDNLKTLLELPSN---YEVLFLASATEIW 74 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTT-TSC-T---T-SHHHHHHHHHHHHHHHHHTTCCTT---EEEEEESCHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCcc-CcC-C---C-CHHHHHHHHHHHHHHHHHhCCCCC---cEEEEeCCchHHH
Confidence 35788899889999999999888766320 111 1 1 123345566777999999998532 2577777777 88
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
..++.++++| .+++...++.++. ... .....|..+..++. + +++.+|+++++ +++ +|++|+++ ++
T Consensus 75 ~~~~~~l~~~--~~i~~~~~~~~~~--~~~----~~~~~g~~~~~v~~--~-~~~~~d~~~l~--~~~-~~~~v~~~~~~ 140 (362)
T 3ffr_A 75 ERIIQNCVEK--KSFHCVNGSFSKR--FYE----FAGELGREAYKEEA--A-FGKGFYPADIT--VPA-DAEIICLTHNE 140 (362)
T ss_dssp HHHHHHHCSS--EEEEEECSHHHHH--HHH----HHHHTTCEEEEEEC--C-TTCCCCGGGCC--CCT-TCCEEEEESEE
T ss_pred HHHHHhccCC--cEEEEcCcHHHHH--HHH----HHHHhCCCeEEEec--C-CCCCCCHHHHh--ccC-CccEEEEEcCC
Confidence 8899999988 5554443333321 110 11123444555543 3 45789999998 555 89999998 66
Q ss_pred c-ccccccHHHHHHHHhhc-CCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc--cccc-
Q 010058 235 A-YARLYDYARIRKVCDKQ-KAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV--KEIN- 308 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~-~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~--~~~~- 308 (519)
| +|...|+++|.++|++| |+++|+|++|..|....+. ..+|++++|+||+++|+.| |+++++++. .+.+
T Consensus 141 nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~-----~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~ 215 (362)
T 3ffr_A 141 TSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDW-----TKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKAL 215 (362)
T ss_dssp TTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCT-----TSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHH
T ss_pred CCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccCh-----hHCcEEEEecccccCCCCceEEEEECHHHHHHhhhc
Confidence 6 89999999999999999 9999999998876544322 2479999999999987777 888888753 1222
Q ss_pred ccCcc---hhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCC
Q 010058 309 KQGQE---VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGT 384 (519)
Q Consensus 309 ~~g~~---~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 384 (519)
..|+. ..+++....+........++++...+.++..+++.+...++++..+++.++++++.+.|++. |+.++.+..
T Consensus 216 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 295 (362)
T 3ffr_A 216 LAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDA 295 (362)
T ss_dssp HHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCG
T ss_pred cccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCCh
Confidence 11111 11111111111111222467888888888888887655568899999999999999999998 888876311
Q ss_pred ---CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 385 ---ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 385 ---~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
...++++.+. + +..++.+.|.+.||.++. |.. +...+.||++++..++ ++|++++++.|++++
T Consensus 296 ~~~~~~~~~~~~~--~-~~~~~~~~l~~~gi~~~~----g~~-~~~~~~iRis~~~~~~----~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 296 KLRSMTTIVANTT--M-LPGEINKILEPFDMAVGA----GYG-SKKETQIRIANFPAHS----LEQVHKLVQTLKEKI 361 (362)
T ss_dssp GGBCSSEEEEEES--S-CHHHHHHHHGGGTEEEEE----CSG-GGTTTEEEEECCTTSC----HHHHHHHHHHHHHHT
T ss_pred hhcCCceEEEecC--C-CHHHHHHHHHHCCeEEec----Ccc-ccCCCEEEEECCCCCC----HHHHHHHHHHHHHHh
Confidence 2234444443 2 678888889888999973 321 1235789999988877 899999999998764
No 42
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.96 E-value=1.6e-26 Score=234.74 Aligned_cols=337 Identities=15% Similarity=0.094 Sum_probs=235.5
Q ss_pred hhhhhcCHHHHHHHHHHHHhc---ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHH
Q 010058 55 APLEEIDPEIADIIELEKARQ---WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 129 (519)
Q Consensus 55 ~~l~~~~~~~~~~~~~e~~~~---~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~ 129 (519)
+.++.+.++.......+..++ .+.|+|..++|+ +++.|++++.+.+.... +||. ....+++ +
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~~lr----~ 74 (363)
T 3ffh_A 8 KSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSKKVAAIQANSSVETE--IYPD-------GWASSLR----K 74 (363)
T ss_dssp GGGTTCCC----CHHHHHHHTTTCSCCEECSSCSCTTCCCHHHHHHHHTCBSCCC--BC-----------CHHHH----H
T ss_pred HHHHhCCCCCCCCCHHHHHHhcCCCceEEccCCCCCCCCCHHHHHHHHHHHHHhh--cCCC-------cchHHHH----H
Confidence 344455555443322222222 456899988886 58999999988764321 3332 2233444 8
Q ss_pred HHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC
Q 010058 130 RALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES 208 (519)
Q Consensus 130 ~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~ 208 (519)
++++++|++++ +|.+++|++ ++..++.++++|||+|+++++.|.++.. .+...|..+..++ .++
T Consensus 75 ~la~~~~~~~~----~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~- 139 (363)
T 3ffh_A 75 EVADFYQLEEE----ELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQ--------NALIEGAEVREIP--LLQ- 139 (363)
T ss_dssp HHHHHHTCCGG----GEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHH--------HHHHHTCEEEEEE--CCT-
T ss_pred HHHHHhCCChh----hEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHH--------HHHHcCCEEEEec--CCC-
Confidence 88889998774 588888887 8888999999999999999977665433 2223455555554 443
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCC-----CCC
Q 010058 209 TGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPF-----EYA 279 (519)
Q Consensus 209 ~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~-----~~~ 279 (519)
++.+|++++++++++ ++++|+++ ++| +|...|.+++.++|+.+ |+++|+|++|..... +.....+ ...
T Consensus 140 ~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~ 216 (363)
T 3ffh_A 140 DGEHDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVT--PQPEKHEKLVRTYKN 216 (363)
T ss_dssp TSCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCS--SCCCCCGGGGGTCTT
T ss_pred CCCcCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcC--ccccCHHHHhhcCCC
Confidence 588999999999987 89999988 666 89999999999999888 999999999874332 1111111 134
Q ss_pred eEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 280 DVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 280 di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
++++.|++|++ +|.|.|++++++ ++.+.+.....+ .+++....+++..+++.. ..+++.
T Consensus 217 ~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~~--~~~~~~ 277 (363)
T 3ffh_A 217 LIITRTFSKIYGLASARVGYGIADK--------------EIIRQLNIVRPP---FNTTSIGQKLAIEAIKDQ--AFIGEC 277 (363)
T ss_dssp EEEEEESSSTTCCSSCCCEEEEECH--------------HHHHHHHHTCCS---CCCBHHHHHHHHHHHHCH--HHHHHH
T ss_pred EEEEeechhhhcCchhceeeeecCH--------------HHHHHHHHhCCC---CCCCHHHHHHHHHHhcCH--HHHHHH
Confidence 58888999987 566779999977 566655544332 356677777777777632 446888
Q ss_pred HHHHHHHHHHHHHHHHh-cCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccC
Q 010058 358 QEQVLSNSSKFARSLLE-RGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTP 436 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~ 436 (519)
.+++.++++++.+.|++ .|+.++.+ ...++++.+.. +..++.+.|.++||.++ ||... ..++++||+++
T Consensus 278 ~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~~~~~~~~---~~~~~~~~l~~~gi~v~----~g~~~-~~~~~iRis~~ 347 (363)
T 3ffh_A 278 RTSNANGIKQYEAFAKRFEKVKLYPA--NGNFVLIDLGI---EAGTIFSYLEKNGYITR----SGAAL-GFPTAVRITIG 347 (363)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEECCC--CSSEEEEECSS---CHHHHHHHHHHTTEECE----ETTTT-TCTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHhhCCCceECCC--CCeEEEEECCC---CHHHHHHHHHHCCeEEE----eCccC-CCCCeEEEECC
Confidence 99999999999999999 69887653 23456666542 67888888888999997 44331 12579999976
Q ss_pred ccccCCCCHHHHHHHHHHHHHH
Q 010058 437 ALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 437 ~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+ ++|++++++.|+++
T Consensus 348 ---~----~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 348 ---K----EEDNSAVIALLEKL 362 (363)
T ss_dssp ---C----HHHHHHHHHHHHHH
T ss_pred ---C----HHHHHHHHHHHHHh
Confidence 4 79999999999875
No 43
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.96 E-value=7.5e-27 Score=239.35 Aligned_cols=339 Identities=13% Similarity=0.054 Sum_probs=233.4
Q ss_pred cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 75 QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 75 ~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
..+.|+|..+++. +++.+.+++.+.+.+.. .+ |+...+..++++.+.+++.+.+|++.+. .+|.+++|+
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~ 99 (388)
T 1j32_A 29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-TR------YGPAAGEPRLREAIAQKLQRDNGLCYGA--DNILVTNGG 99 (388)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHH
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCH
Confidence 3567899887764 57899999998875521 12 3333445778888888888888864322 369999987
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi 230 (519)
+ |+..++.++++|||+|++.++.|.++... +...|..+..++. ++ +++.+|++++++++++ ++++|+
T Consensus 100 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--------~~~~g~~~~~v~~--~~~~~~~~d~~~l~~~l~~-~~~~v~ 168 (388)
T 1j32_A 100 KQSIFNLMLAMIEPGDEVIIPAPFWVSYPEM--------VKLAEGTPVILPT--TVETQFKVSPEQIRQAITP-KTKLLV 168 (388)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCTHHHHH--------HHHTTCEEEEECC--CGGGTTCCCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHHHH--------HHHcCCEEEEecC--CcccCCCCCHHHHHHhcCc-CceEEE
Confidence 7 88889999999999999999887665431 2233544445543 32 2567999999999986 889888
Q ss_pred Ec-ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CC----CCCeEEEEcCCCcc--cCCCcce
Q 010058 231 AG-ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PF----EYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 231 ~~-~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~----~~~di~~~S~~K~l--~GprgG~ 297 (519)
++ ++| +|... ++++|.++|+++|+++|+|++|..+.......++ .+ .+.|+++.|+||++ +|+|.|+
T Consensus 169 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~ 248 (388)
T 1j32_A 169 FNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGF 248 (388)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEE
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEE
Confidence 77 666 78765 4899999999999999999997653321111111 01 13689999999987 4667799
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G 376 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 376 (519)
+++++ ++.+.+.........++ +.....+...+++.. ...+++..+++.++++++.+.|++. |
T Consensus 249 ~~~~~--------------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g 312 (388)
T 1j32_A 249 LAGPV--------------PLVKAATKIQGHSTSNV-CTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPG 312 (388)
T ss_dssp EECCH--------------HHHHHHHHHHHTTTCSC-CHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred EEeCH--------------HHHHHHHHHHhhcccCC-CHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99987 45544443322222233 333444444566532 3456888899999999999999998 8
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhhcc-cCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLES-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
+.++.+ ..+.+.++.+...+.+..++.+.|.+ +||.+. |+... ..++++|+++. ++ +++++++++.|
T Consensus 313 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~-~~~~~iRis~~--~~----~~~i~~~~~~l 380 (388)
T 1j32_A 313 LECPKP-DGAFYMFPSIAKTGRSSLDFCSELLDQHQVATV----PGAAF-GADDCIRLSYA--TD----LDTIKRGMERL 380 (388)
T ss_dssp CBCCCC-CBTTEECCBCGGGTCCHHHHHHHHHHHHCEECE----EGGGG-TCTTBEEEECC--SC----HHHHHHHHHHH
T ss_pred CcccCC-CeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEe----Chhhh-CCCCcEEEEec--CC----HHHHHHHHHHH
Confidence 877654 23445555554324567788877764 899997 33320 01468999975 45 89999999999
Q ss_pred HHHHHH
Q 010058 456 DAAVKL 461 (519)
Q Consensus 456 ~~~l~~ 461 (519)
.++++.
T Consensus 381 ~~~l~~ 386 (388)
T 1j32_A 381 EKFLHG 386 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
No 44
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.96 E-value=1.9e-26 Score=233.20 Aligned_cols=319 Identities=11% Similarity=0.046 Sum_probs=232.7
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..++|+ +++.|++++.+.+.+.. +|| .....++ ++++++++|++++ +|++++|++
T Consensus 16 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~-------~~~~~~l----~~~la~~~~~~~~----~i~~~~g~~ 78 (354)
T 3ly1_A 16 DNPIRINFNENPLGMSPKAQAAARDAVVKAN--RYA-------KNEILML----GNKLAAHHQVEAP----SILLTAGSS 78 (354)
T ss_dssp SSCEECSSCCCSSCCCHHHHHHHHHTGGGTT--SCC-------HHHHHHH----HHHHHHHTTSCGG----GEEEESHHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHhhCc--CCC-------CCchHHH----HHHHHHHhCCChH----HEEEeCChH
Confidence 356899888885 58999999998876522 332 1233444 4888899998764 589999887
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-hCCcEEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL-FRPKLIVA 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~-~k~klIi~ 231 (519)
++..++.++++|||+|++.++.|.++.. .+...|..+..++ .+ +++.+|++++++++++ .++++|++
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~l~~~~~~~~v~l 147 (354)
T 3ly1_A 79 EGIRAAIEAYASLEAQLVIPELTYGDGEH--------FAKIAGMKVTKVK--ML-DNWAFDIEGLKAAVAAYSGPSIVYL 147 (354)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--CC-TTSCCCHHHHHHHHHTCSSCEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEECCCCchHHHH--------HHHHcCCEEEEec--CC-CCCCCCHHHHHHHhccCCCCCEEEE
Confidence 8888999999999999999987766543 2223354444444 44 3588999999999983 38999998
Q ss_pred c-ccc-ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCCC-----C-CCeEEEEcCCCcc--cCCCcceEE
Q 010058 232 G-ASA-YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSPF-----E-YADVVTTTTHKSL--RGPRGAMIF 299 (519)
Q Consensus 232 ~-~sn-~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p~-----~-~~di~~~S~~K~l--~GprgG~i~ 299 (519)
+ ++| +|...+.+++.++++. +|+++|+|++|.... ..+....++ . ..++++.|+||++ +|.|.|+++
T Consensus 148 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 226 (354)
T 3ly1_A 148 VNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFV-NDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAV 226 (354)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGC-CCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEE
T ss_pred eCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhc-cccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeee
Confidence 8 666 8889998888888877 999999999987432 222111111 1 3468899999987 577789999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
+++ ++.+.+.....+ ++++....+++..+++.. ..+++..+++.++++++.+.|.+.|+.+
T Consensus 227 ~~~--------------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 287 (354)
T 3ly1_A 227 AHP--------------TVIALMGRYVAG---EKINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPY 287 (354)
T ss_dssp CCH--------------HHHHHHGGGTTC---SCCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred cCH--------------HHHHHHHHhcCC---CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 977 566666544333 456666666666666532 3468888999999999999999988877
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+.+ ...++++.+.. +..++.+.|.++||.++ ...++ .++++||++. + ++|++++++.|++++
T Consensus 288 ~~~--~~~~~~~~~~~---~~~~~~~~l~~~gi~v~-g~~~~-----~~~~iRis~~---~----~~~i~~~~~~l~~~l 349 (354)
T 3ly1_A 288 LPS--EGNFVFHQLVV---PLKDYQTHMADAGVLIG-RAFPP-----ADNWCRISLG---T----PQEMQWVADTMREFR 349 (354)
T ss_dssp CCC--CSSEEEEECSS---CHHHHHHHHHHTTEECC-CCCTT-----CTTEEEEECC---C----HHHHHHHHHHHHHHH
T ss_pred CCC--CceEEEEECCC---CHHHHHHHHHHCCEEEe-ecCCC-----CCCEEEEEcC---C----HHHHHHHHHHHHHHH
Confidence 643 33456666643 57788888888999986 32221 3578999964 4 799999999999988
Q ss_pred H
Q 010058 460 K 460 (519)
Q Consensus 460 ~ 460 (519)
+
T Consensus 350 ~ 350 (354)
T 3ly1_A 350 K 350 (354)
T ss_dssp H
T ss_pred H
Confidence 6
No 45
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.96 E-value=2.9e-27 Score=243.46 Aligned_cols=334 Identities=17% Similarity=0.207 Sum_probs=235.0
Q ss_pred cCeeecCCCCC---CcHHHHHHHhhHhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 77 KGLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en~---~~~~V~ea~~~~l~~~~~~g~p~~~~y~~-~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
..|++..+.+. .++.+.+++.+.+.. |..++.+.+|..+ .....+++ +.+++++|++ + +|++++|+
T Consensus 46 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~-~----~i~~~sGs 115 (401)
T 1fc4_A 46 HVINFCANNYLGLANHPDLIAAAKAGMDS-HGFGMASVRFICGTQDSHKELE----QKLAAFLGME-D----AILYSSCF 115 (401)
T ss_dssp EEEECCCSCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCHHHHCCBHHHHHHH----HHHHHHHTCS-E----EEEESCHH
T ss_pred cEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCCCcccCCcHHHHHHH----HHHHHHhCCC-c----EEEeCChH
Confidence 45777766433 389999999998865 4333333333211 33444444 8888888987 2 58999998
Q ss_pred HHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CCc
Q 010058 153 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-----RPK 227 (519)
Q Consensus 153 ~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~k 227 (519)
.++..++.++++|||.|++.++.|+++.. .+...|..+..++ .+|++++++.+++. +++
T Consensus 116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--------~~d~~~l~~~l~~~~~~~~~~~ 179 (401)
T 1fc4_A 116 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKAKRYRYA--------NNDMQELEARLKEAREAGARHV 179 (401)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHTSCSEEEEEC--------TTCHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHHcCCCCEEEEcchhHHHHHH--------HHHHcCCceEEEC--------CCCHHHHHHHHHHhhccCCCce
Confidence 88888899999999999999988766543 1223344433332 25889999988753 689
Q ss_pred EEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccc-cCCC-C--CCC-CCCeEEEEcCCCcccCCCcceEEe
Q 010058 228 LIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVA-AGVI-P--SPF-EYADVVTTTTHKSLRGPRGAMIFF 300 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~-~~~~-~--~p~-~~~di~~~S~~K~l~GprgG~i~~ 300 (519)
+|+++ ++| +|...++++|.++|+++|+++|+|++|..|+.. .+.. + ..+ ++.|++++|+||+++|+.||++++
T Consensus 180 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~ 259 (401)
T 1fc4_A 180 LIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAA 259 (401)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEE
T ss_pred EEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEc
Confidence 99888 555 889999999999999999999999998767652 1110 0 011 157999999999996666899999
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCC-CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPG-LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~-~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
++ ++.+.+.....+. ..++++...++++..+++.... .++..+++.++++++.+.|++.|+++
T Consensus 260 ~~--------------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~ 323 (401)
T 1fc4_A 260 RK--------------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAAGFTL 323 (401)
T ss_dssp CH--------------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred CH--------------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 87 4555444322111 1235566677777777776543 46778899999999999999988877
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+. ...+++++.+.. +.+..++.+.|.+.||.++....++. +...+.+||+++..++ ++|++++++.|.+++
T Consensus 324 ~~--~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~~~----~~~i~~~~~~l~~~~ 394 (401)
T 1fc4_A 324 AG--ADHAIIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVV--PKGQARIRTQMSAAHT----PEQITRAVEAFTRIG 394 (401)
T ss_dssp CC--SSSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSS--CTTCEEEEEECCTTCC----HHHHHHHHHHHHHHH
T ss_pred cC--CCCCEEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCC--CCCCceEEEEeCCCCC----HHHHHHHHHHHHHHH
Confidence 63 345666776632 23466788888888999974332221 1234679999987777 899999999999988
Q ss_pred HH
Q 010058 460 KL 461 (519)
Q Consensus 460 ~~ 461 (519)
+.
T Consensus 395 ~~ 396 (401)
T 1fc4_A 395 KQ 396 (401)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 46
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.96 E-value=3.1e-27 Score=245.25 Aligned_cols=341 Identities=13% Similarity=0.109 Sum_probs=240.7
Q ss_pred cccCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 75 QWKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 75 ~~~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.++.|+|..+++ .++|.|.+++.+.+.+.. .+|+.. ..++++.+++++++.+|.+.+. .+|++++|+
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~--------~~~l~~~l~~~l~~~~g~~~~~--~~v~~~~g~ 128 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREHI-FGYNYF--------NDDLYQAVIDWERKEHDYAVVK--EDILFIDGV 128 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCC-SSCBCC--------CHHHHHHHHHHHHHHHCCCCCG--GGEEEESCH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcCC-cCCCCC--------CHHHHHHHHHHHHHHhCCCCCH--HHEEEcCCH
Confidence 346788876665 358999999999886521 133211 1567778889999999943221 359999998
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
+ |+..++.++++|||+|++.++.|.++.. .+...|..+..+++.....++.+|+++|++++++.++++|++
T Consensus 129 ~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil 200 (421)
T 3l8a_A 129 VPAISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLL 200 (421)
T ss_dssp HHHHHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEE
Confidence 8 9999999999999999999977766543 222345555566654233446789999999998548999988
Q ss_pred c-ccc-cccc---ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC-------CCCeEEEEcCCCcc--cCCCcce
Q 010058 232 G-ASA-YARL---YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF-------EYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 232 ~-~sn-~g~~---~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~-------~~~di~~~S~~K~l--~GprgG~ 297 (519)
+ ++| +|.. .++++|+++|++||++||+|++|.. +...+....++ ...++++.|++|++ +|.+.|+
T Consensus 201 ~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~ 279 (421)
T 3l8a_A 201 CSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQD-LALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSF 279 (421)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEE
T ss_pred CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEe
Confidence 8 656 7766 5689999999999999999999854 22222111111 13458889999987 4677799
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G 376 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 376 (519)
++++++ ++.+.+.........++++...++++.++++.. ....++..+++.++++++.+.|++. +
T Consensus 280 ~~~~~~-------------~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 345 (421)
T 3l8a_A 280 AIIQNE-------------SLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG-KPWLEELKTVIEGNIKLVIKELEAKTK 345 (421)
T ss_dssp EECCSH-------------HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred EEcCCH-------------HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999842 455544433222223466777777777777753 3345888899999999999999986 8
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
+.++.+ ..+.+.|+++...+.+..++.+.| +++||.++. |.. ++...+.+||+++ ++ +++++++++.
T Consensus 346 i~~~~~-~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~----g~~f~~~~~~~iRi~~~--~~----~~~i~~~l~~ 414 (421)
T 3l8a_A 346 IKVMEP-EGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLND----GAHFGKEGKYFARLNVA--TP----KNTVQEALSR 414 (421)
T ss_dssp CEEECC-SBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEE----GGGGCGGGTTEEEEECC--SC----HHHHHHHHHH
T ss_pred ceEeCC-CeeEEEEEeccccCCCHHHHHHHHHHhCCEEEEC----chhhCCCCCCEEEEEec--CC----HHHHHHHHHH
Confidence 888764 334566688765456677787777 467999973 332 2234678999977 45 7999999999
Q ss_pred HHHHHH
Q 010058 455 FDAAVK 460 (519)
Q Consensus 455 l~~~l~ 460 (519)
|.++++
T Consensus 415 l~~~l~ 420 (421)
T 3l8a_A 415 IISVFG 420 (421)
T ss_dssp HHHHC-
T ss_pred HHHHHh
Confidence 988764
No 47
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.96 E-value=5.9e-27 Score=239.79 Aligned_cols=332 Identities=15% Similarity=0.146 Sum_probs=232.6
Q ss_pred cCeeecCCCC---CCcHHHHHHHhhHhhhccCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 77 KGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYY-GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y-~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
..|++..+++ ++++.+.+++.+.+.+ +..+++..+|. +..+...+++ +.+++++|++. .|++++|+
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGt 109 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVHQALE----EELAEWLGYSR-----ALLFISGF 109 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHHHHHH----HHHHHHHTCSE-----EEEESCHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcH
Confidence 4578888775 4689999999998865 32233333332 3334455555 78888889862 59999998
Q ss_pred HHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEE
Q 010058 153 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIV 230 (519)
Q Consensus 153 ~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi 230 (519)
.++..++.++++|||.|++.++.|+++... +...|..+..++ .+|++++++.+++. ++++|+
T Consensus 110 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~--------~~~~g~~~~~~~--------~~d~~~l~~~l~~~~~~~~~v~ 173 (384)
T 1bs0_A 110 AANQAVIAAMMAKEDRIAADRLSHASLLEA--------ASLSPSQLRRFA--------HNDVTHLARLLASPCPGQQMVV 173 (384)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHHH--------HHTSSSEEEEEC--------TTCHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEcccccHHHHHH--------HHHcCCCEEEeC--------CCCHHHHHHHHHhcCCCCeEEE
Confidence 788889999999999999999887766442 223344444433 25899999988763 267777
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccc-cCCC-CCCC-CCCeEEEEcCCCcccCCCcceEEeecccc
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVA-AGVI-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVK 305 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~-~~~~-~~p~-~~~di~~~S~~K~l~GprgG~i~~~~~~~ 305 (519)
++ ++| +|...|+++|.++|+++|+++|+|++|..|... .+.. ...+ .+.|++++|+||+++ |.||++++++
T Consensus 174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~--- 249 (384)
T 1bs0_A 174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG-VSGAAVLCSS--- 249 (384)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS-SCCEEEEECH---
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh-ccCcEEEeCH---
Confidence 77 556 899999999999999999999999999776532 1110 0001 147899999999985 7789999987
Q ss_pred cccccCcchhhhHHHHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Q 010058 306 EINKQGQEVMYAYEDKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGT 384 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 384 (519)
++.+.+.....+.. .++++...++++.++++.......++..+++.++++++.+.|++.|+++.. .
T Consensus 250 -----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~ 316 (384)
T 1bs0_A 250 -----------TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLAD--S 316 (384)
T ss_dssp -----------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECS--C
T ss_pred -----------HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccC--C
Confidence 44444433211111 124566666676777776654345788899999999999999998988763 2
Q ss_pred CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 385 ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 385 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
..+++++.+.. +.+..++.+.|.+.||.++....++. +...+.+||+++..++ ++|++++++.|+++
T Consensus 317 ~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~~Ri~~~~~~~----~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 317 CSAIQPLIVGD-NSRALQLAEKLRQQGCWVTAIRPPTV--PAGTARLRLTLTAAHE----MQDIDRLLEVLHGN 383 (384)
T ss_dssp CSSBCCEEEES-HHHHHHHHHHHHHTTEECCEECTTSS--CTTCEEECCBCCTTCC----HHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCC-HHHHHHHHHHHHHCCcEEEeecCCCC--CCCCceEEEEEcCCCC----HHHHHHHHHHHHhh
Confidence 34555666532 23566788888888999974433321 2234689999987777 89999999998764
No 48
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=9.3e-27 Score=237.94 Aligned_cols=344 Identities=13% Similarity=0.066 Sum_probs=229.7
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC----CCCCcceEEeCCcH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD----PAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~----~~~~~~~V~~~sGs 152 (519)
+.+.+.++...+++.|++++.+.+.+ + ++ ... .......+++++++++.. + .+|++++|+
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~~-~--~~--------~~~-~~~~~~~~~~l~~~~~~~~~~~~----~~v~~~~g~ 68 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSLG-H--TS--------PEF-VSIFQRVLKNTRAVFKSAAASKS----QPFVLAGSG 68 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCCC-T--TS--------HHH-HHHHHHHHHHHHHHTTCCGGGTC----EEEEEESCT
T ss_pred cceeecCCCcCchHHHHHHHhccccc-c--CC--------HHH-HHHHHHHHHHHHHHhCCCCCCCC----ceEEEcCch
Confidence 45788899888999999998765432 1 11 111 122233457777777653 3 257777776
Q ss_pred H-HHHHHHHhhc---CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcE
Q 010058 153 P-ANFQVYTALL---KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKL 228 (519)
Q Consensus 153 ~-a~~~~~~all---~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~kl 228 (519)
+ ++..++.+++ +|||+|++++.++..... .. .+...|..+..++.. + +++.+|++++++++++.++++
T Consensus 69 t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~-~~-----~~~~~g~~~~~v~~~-~-~~~~~d~~~l~~~l~~~~~~~ 140 (385)
T 2bkw_A 69 TLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF-AD-----CLRSYGAQVDVVRPL-K-IGESVPLELITEKLSQNSYGA 140 (385)
T ss_dssp THHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH-HH-----HHHHTTCEEEEECCS-S-TTSCCCHHHHHHHHHHSCCSE
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH-HH-----HHHHcCCceEEEecC-C-CCCCCCHHHHHHHHhcCCCCE
Confidence 6 8888999987 999999887533221110 00 122235444455431 3 467899999999998657999
Q ss_pred EEEc-ccc-ccccccHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecc
Q 010058 229 IVAG-ASA-YARLYDYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKG 303 (519)
Q Consensus 229 Ii~~-~sn-~g~~~d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~ 303 (519)
|+++ ++| +|...|+++|.++|+++ |+++|+|++|..|....++... ++|++++|+||++.||.| |+++++++
T Consensus 141 v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~~~G~G~~~~~~~ 217 (385)
T 2bkw_A 141 VTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEW---GVDFALTASQKAIGAPAGLSISLCSSR 217 (385)
T ss_dssp EEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTT---TCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred EEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccccccc---CceEEEecCccccccCCcceEEEEcHH
Confidence 9988 555 79999999999999999 9999999999876554333222 579999999999988877 99999874
Q ss_pred cc---cc-----c--ccCcch-hh-hHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHH
Q 010058 304 VK---EI-----N--KQGQEV-MY-AYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARS 371 (519)
Q Consensus 304 ~~---~~-----~--~~g~~~-~~-~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (519)
.. +. + ..++.. .+ .....+... .....++++...++++.++++.+...++++..++++++++++.+.
T Consensus 218 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 296 (385)
T 2bkw_A 218 FMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAG-KGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDS 296 (385)
T ss_dssp HHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTT-CCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCCceeecHHHHhhHHHhhhcc-CCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHH
Confidence 21 10 0 011100 00 000011100 011125778888888888888765545788899999999999999
Q ss_pred H-HhcCCEEecCC----CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEec-cCc---cccCC
Q 010058 372 L-LERGYDLVSGG----TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG-TPA---LTSRG 442 (519)
Q Consensus 372 L-~~~g~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~-~~~---~ttrg 442 (519)
| ++.|+.++.+. ...+++++.+. + ..++.+.|.+.||.++ |+.......+.+|++ ++. .++
T Consensus 297 L~~~~g~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~l~~~gi~v~----~g~~~~~~~~~iRis~~~~~~~~~~-- 366 (385)
T 2bkw_A 297 LVNGLQLTSVSRYPSNMSAHGLTAVYVA--D--PPDVIAFLKSHGVVIA----GGIHKDIGPKYIRIGHMGVTACNKN-- 366 (385)
T ss_dssp HHTTTCCEESSCSSSTTBCSSCEEEECS--C--HHHHHHHHHHTTEECB----CCCCTTTGGGEEEECCCGGGTSSTT--
T ss_pred HHHhcCceecccCcccccCCceEEEecC--C--HHHHHHHHHHCCeEEe----CCCCcccCCCEEEEEccccccccCC--
Confidence 9 88888876532 12455566553 2 6678888888999997 443322245789999 542 245
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 010058 443 FVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 443 ~~~~di~~l~~~l~~~l~ 460 (519)
++|++++++.|+++++
T Consensus 367 --~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 367 --LPYMKNCFDLIKLALQ 382 (385)
T ss_dssp --CTHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHHHHHH
Confidence 7999999999988764
No 49
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.95 E-value=1.8e-26 Score=234.70 Aligned_cols=321 Identities=14% Similarity=0.127 Sum_probs=229.5
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC-CCCCCcceEEeCCcH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL-DPAKWGVNVQSLSGS 152 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~-~~~~~~~~V~~~sGs 152 (519)
.+.|+|..++|+ +++.|++++.+.+.+....+|+. ....+++ +++++++|+ +++ +|.+++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-------~~~~~l~----~~la~~~g~~~~~----~i~~~~g~ 94 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-------PSSEALR----AKLKEVMQVPAGM----EVLLGNGS 94 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-------CCHHHHH----HHHHHHHTCCTTC----EEEEEEHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-------CcHHHHH----HHHHHHhCCCCcc----eEEEcCCH
Confidence 456999988886 58899999999887421123332 2234555 788888998 443 69999998
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
+ ++..++.++++|||+|++.++.|.++... +...|..+..++ .+ +++.+|+++++++++++++++|++
T Consensus 95 t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~ 163 (367)
T 3euc_A 95 DEIISMLALAAARPGAKVMAPVPGFVMYAMS--------AQFAGLEFVGVP--LR-ADFTLDRGAMLAAMAEHQPAIVYL 163 (367)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEESCSCCSCHH--------HHTTTCEEEEEE--CC-TTSCCCHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCCHHHHHHH--------HHHcCCeEEEec--CC-CCCCCCHHHHHHHhhccCCCEEEE
Confidence 8 88889999999999999999877665432 223354444444 44 367899999999998778999998
Q ss_pred c-ccc-ccccc---cHHHHHHHHhhc--CCEEEehhhhhhhccccCCCCC-CCCCCeEEEEcCCCc-ccCCCcceEEeec
Q 010058 232 G-ASA-YARLY---DYARIRKVCDKQ--KAVMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKS-LRGPRGAMIFFRK 302 (519)
Q Consensus 232 ~-~sn-~g~~~---d~~~i~~ia~~~--~~~livD~ah~~g~~~~~~~~~-p~~~~di~~~S~~K~-l~GprgG~i~~~~ 302 (519)
+ ++| +|... ++++|.++|++| |+++|+|++|... ...+..+. .....++++.|+||+ ++|.|.|++++++
T Consensus 164 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 242 (367)
T 3euc_A 164 AYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPF-AQESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDP 242 (367)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCS-SSCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECH
T ss_pred cCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhh-cccchHHHHhhCCCEEEEecchhhcccccCceeeeeCH
Confidence 8 666 78765 477888889999 9999999997632 11111110 001356888899997 3566679999977
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEec
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVS 381 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 381 (519)
++.+.+.....+ .+++....+++..+++. ...+++..+++.++++++.+.|+++ |+.+..
T Consensus 243 --------------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~ 303 (367)
T 3euc_A 243 --------------QWLEQLDKVRPP---YNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFP 303 (367)
T ss_dssp --------------HHHHHHGGGCCS---SCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECC
T ss_pred --------------HHHHHHHHhCCC---CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC
Confidence 566655544332 34566666666666664 2346888999999999999999998 888544
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+ ...++++.+. +..++.+.|.++||.++ |+.. .+...+++||++. + ++|++++++.|++++
T Consensus 304 ~--~~~~~~~~~~----~~~~l~~~l~~~gi~v~----~~~~~~~~~~~~iRis~~---~----~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 304 S--AANFLLARVP----DAAQTFDRLLARKVLIK----NVSKMHPLLANCLRVTVS---T----PEENAQFLEAFAASL 365 (367)
T ss_dssp C--SSSEEEEECS----CHHHHHHHHHTTTEECE----ECGGGCGGGTTEEEEECC---C----HHHHHHHHHHHHHHT
T ss_pred C--CCeEEEEECC----CHHHHHHHHHHCCeEEE----ECCccCCCCCCEEEEecC---C----HHHHHHHHHHHHHHh
Confidence 3 3345566654 57788888999999997 3332 2334678999965 4 799999999998875
No 50
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.95 E-value=4.5e-27 Score=240.49 Aligned_cols=353 Identities=15% Similarity=0.119 Sum_probs=237.8
Q ss_pred hhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~ 131 (519)
++++..+.+.++..+..... ..+.|+|..+++. +++.+.+++.+.+.+ . ..| +......+++ +.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~-~~y------~~~~~~~~l~----~~l 70 (381)
T 1v2d_A 4 HPRTEAAKESIFPRMSGLAQ-RLGAVNLGQGFPSNPPPPFLLEAVRRALGR-Q-DQY------APPAGLPALR----EAL 70 (381)
T ss_dssp CGGGGGC---CHHHHHHHHH-HHTCEECCCCSCSSCCCHHHHHHHHHHTTT-S-CSC------CCTTCCHHHH----HHH
T ss_pred hhhhhhcCccHHHHHHHHHh-cCCeEEecCCCCCCCCCHHHHHHHHHHHHH-h-cCC------CCCCCCHHHH----HHH
Confidence 34455555666655555432 2457899877764 578999999988754 1 123 2222344555 777
Q ss_pred HHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCC
Q 010058 132 LDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG 210 (519)
Q Consensus 132 ~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~ 210 (519)
+++++++++ +|.+++|++ ++..++.++++|||+|+++++.|.++.. .+...|..+..++.+..++++
T Consensus 71 a~~~~~~~~----~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~ 138 (381)
T 1v2d_A 71 AEEFAVEPE----SVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGAKARLVRLDLTPEGF 138 (381)
T ss_dssp HHHHTSCGG----GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEEETTEE
T ss_pred HHhcCCChh----hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEeCCCCCccC
Confidence 788998764 488888877 8888999999999999999988876543 122335444455432103457
Q ss_pred CCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC----CCCCeE
Q 010058 211 YIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP----FEYADV 281 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p----~~~~di 281 (519)
.+|++++++++++ ++++|+++ ++| +|...+ +++|.++|+++|+++|+|++|..+.. +....+ ..+.|+
T Consensus 139 ~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--g~~~~~~~~~~~~~~~ 215 (381)
T 1v2d_A 139 RLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY--GERPRRLREFAPERTF 215 (381)
T ss_dssp ECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS--SSCCCCHHHHCTTTEE
T ss_pred CcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc--CCCCCCHHHhcCCCEE
Confidence 8999999998876 78999887 656 787665 88999999999999999999865433 211111 125799
Q ss_pred EEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc-CHhHHHHH
Q 010058 282 VTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK-TPEYKAYQ 358 (519)
Q Consensus 282 ~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~-~~~~~~~~ 358 (519)
++.|+||++ +|+|.|+++++++ +.+.+...... ...+++....+++..+++... ...+++..
T Consensus 216 ~~~s~sK~~~~~G~r~G~~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 280 (381)
T 1v2d_A 216 TVGSAGKRLEATGYRVGWIVGPKE--------------FMPRLAGMRQW-TSFSAPTPLQAGVAEALKLARREGFYEALR 280 (381)
T ss_dssp EEEEHHHHTTCGGGCCEEEECCTT--------------THHHHHHHHHH-HTSSCCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred EEeechhhcCCcccceEEEEeCHH--------------HHHHHHHHHhh-cccCCCcHHHHHHHHHHhCcccHHHHHHHH
Confidence 999999987 4677899999873 33333221110 112445556666667776542 34568889
Q ss_pred HHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcc
Q 010058 359 EQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPAL 438 (519)
Q Consensus 359 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ 438 (519)
+++.++++++.+.|++.|+.++.+. .+.++++.+... + +.+.|.++||.+......+. .+...+++||++..
T Consensus 281 ~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~--~---~~~~l~~~gi~v~~g~~~~~-~~~~~~~iRi~~~~- 352 (381)
T 1v2d_A 281 EGYRRRRDLLAGGLRAMGLRVYVPE-GTYFLMAELPGW--D---AFRLVEEARVALIPASAFYL-EDPPKDLFRFAFCK- 352 (381)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEECCS-BSSEEEEECTTC--C---HHHHHHHTCEECEEGGGGCS-SSCCTTEEEEECCS-
T ss_pred HHHHHHHHHHHHHHHHCCCEecCCC-cceEEEEecChH--h---HHHHHHhCCEEEecchHhCC-CCCCCCEEEEEeCC-
Confidence 9999999999999999998887642 345566666432 2 77788899999974321111 11245789999875
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 439 TSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 439 ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+ ++|++++++.|.+++...
T Consensus 353 -~----~~~i~~~~~~l~~~l~~~ 371 (381)
T 1v2d_A 353 -T----EEELHLALERLGRVVNSP 371 (381)
T ss_dssp -C----HHHHHHHHHHHHHHC---
T ss_pred -C----HHHHHHHHHHHHHHHhhc
Confidence 4 799999999999887643
No 51
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=2.6e-28 Score=251.10 Aligned_cols=340 Identities=16% Similarity=0.157 Sum_probs=222.8
Q ss_pred cCeeecCC-CCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 77 KGLELIPS-ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 77 ~~i~L~a~-en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
+.+.|..+ ..++++.|++++.+.+.+.+ ++|+..+.. ........+.+++++++++|++++ +|++++|++ |
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~~----~v~~~~g~t~a 92 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEF--GNAGSRHEY-GIRAKRGVERAREYLASTVSAEPD----ELIFTSGATES 92 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHH-HHHHHHHHHHHHHHHHHHTTCCGG----GEEEESCHHHH
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhcc--CCCcccchh-HHHHHHHHHHHHHHHHHHcCCCCC----cEEEeCCHHHH
Confidence 44555533 34678999999999887654 444442221 233345556777999999999864 588888887 8
Q ss_pred HHHHHHhhc----CCCC-EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 155 NFQVYTALL----KPHE-RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 155 ~~~~~~all----~pGD-~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
+..++.+++ +||| +|++++.+|+++....... ...|..+..++ ++ +++.+|++++++++++ ++++|
T Consensus 93 l~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-----~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v 163 (400)
T 3vax_A 93 NNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-----AGRGFEVDFLT--PG-PSGRISVEGVMERLRP-DTLLV 163 (400)
T ss_dssp HHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-----HTTTCEEEEEC--CC-TTCCCCHHHHHTTCCT-TEEEE
T ss_pred HHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-----HhcCCeEEEEc--cC-CCCCcCHHHHHHhcCC-CceEE
Confidence 888899887 8999 9999998887765433211 11244444444 44 3678999999999987 89999
Q ss_pred EEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEE-eecc--
Q 010058 230 VAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIF-FRKG-- 303 (519)
Q Consensus 230 i~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~-~~~~-- 303 (519)
+++ ++| +|...|+++|.++|+++|+++|+|++|..|....++... +|++++|+|| +.|+.| |+++ ++++
T Consensus 164 ~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~----~d~~~~s~~K-~~g~~g~g~~~~~~~~~~ 238 (400)
T 3vax_A 164 SLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP----IDMISISGHK-IGAPKGVGALVTRRREEM 238 (400)
T ss_dssp ECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC----CSEEEEETGG-GTSCSSCEEEEECBCSSS
T ss_pred EEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc----CcEEEEeHHH-hCCCCceEEEEEecchhc
Confidence 988 566 899999999999999999999999999877655433211 6999999999 566765 8888 7762
Q ss_pred ----ccccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCE
Q 010058 304 ----VKEIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYD 378 (519)
Q Consensus 304 ----~~~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 378 (519)
..+.+ ..++.. ......++++...++++.++++... .++++..+++.++++++.+.|+..|+.
T Consensus 239 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~ 306 (400)
T 3vax_A 239 DDERVPLEPIMFGGGQ-----------ERKLRPGTLPVPLIMGLAEAAKIFE-AEHAQWQVAAQDLRSRLLAGLASTSFQ 306 (400)
T ss_dssp TTCBCCCCCSSCSSCT-----------GGGTSCSCCCHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHHHHHHHHTTTTCE
T ss_pred cccccccCceecCCCc-----------eeeeecCCCCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhhCCCCEE
Confidence 11122 111110 0011236678888888888887654 357889999999999999999933888
Q ss_pred EecCCCC--cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-C-------------CC----CCCeEEecc-Cc
Q 010058 379 LVSGGTE--NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-S-------------AM----VPGGIRMGT-PA 437 (519)
Q Consensus 379 ~~~~~~~--~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~-------------~~----~~~~iRi~~-~~ 437 (519)
+..+... .+++.+.+ .+.+..++.+.|. .||.++ +|.. . .. ..+.|||++ +.
T Consensus 307 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~-~gi~v~----~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~ 379 (400)
T 3vax_A 307 VNGDQDHVVPHILNLSF--EDVDAEAFLVTLK-DLVAVA----TGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPG 379 (400)
T ss_dssp ECSCTTSBCTTEEEEEC--TTCCHHHHHHHHH-HHHHHT----TTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC
T ss_pred EeCCcccCCCCEEEEEe--CCCCHHHHHHHHh-cCcEEE----ecccccCCCCCccHHHHHcCCCccccCceEEEEccCC
Confidence 7765321 23333333 3567888999998 999886 3321 0 00 147899999 87
Q ss_pred cccCCCCHHHHHHHHHHHHHHHH
Q 010058 438 LTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 438 ~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.++ ++|++++++.|+++++
T Consensus 380 ~~t----~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 380 QAT----DLDVEELARGVAKLKP 398 (400)
T ss_dssp -----------------------
T ss_pred CCC----HHHHHHHHHHHHHHhc
Confidence 777 8999999999988764
No 52
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=3.3e-26 Score=242.62 Aligned_cols=344 Identities=13% Similarity=0.046 Sum_probs=240.6
Q ss_pred CCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC--CCCCcceEEeCCcHHHHHHHHHhhc
Q 010058 86 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD--PAKWGVNVQSLSGSPANFQVYTALL 163 (519)
Q Consensus 86 n~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~--~~~~~~~V~~~sGs~a~~~~~~all 163 (519)
.++++.+.+++.+.+...+ ++ +.......++|+.+++++++++|++ +++....+.+++|+.++..++.++.
T Consensus 66 ~~~~~~v~~~l~~~~~~~~--~~-----~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~ 138 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNY--VD-----MDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFK 138 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBT--TC-----TTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCC--CC-----hhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHH
Confidence 4568999999998876533 11 1233557889999999999999998 4331112234444448887888776
Q ss_pred CC--------CC-----EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 164 KP--------HE-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 164 ~p--------GD-----~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
.+ || +|++++..|.++.. .+...|..++.++ ++++++.+|++++++++.+ +|++|+
T Consensus 139 ~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~t~~v~ 207 (502)
T 3hbx_A 139 RKWQNKRKAEGKPVDKPNIVTGANVQVCWEK--------FARYFEVELKEVK--LSEGYYVMDPQQAVDMVDE-NTICVA 207 (502)
T ss_dssp HHHHHHHHHTTCCCSCCEEEEETTCCHHHHH--------HHHHTTCEEEEEC--CBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHhHHHHhcCCCCCCcEEEEcCCchHHHHH--------HHHHcCceeEEEe--cCCCcCcCCHHHHHHHHhh-CCEEEE
Confidence 55 87 89998877665433 2334465566665 4544589999999999987 899888
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhc------CCEEEehhhhhhhccc--cCCCCC--CCCCCeEEEEcCCCcccCCCc-ce
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQ------KAVMLADMAHISGLVA--AGVIPS--PFEYADVVTTTTHKSLRGPRG-AM 297 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~------~~~livD~ah~~g~~~--~~~~~~--p~~~~di~~~S~~K~l~Gprg-G~ 297 (519)
++ ++| +|...|+++|.++|+++ |+++++|+||..+..+ .+..+. ...++|++++++||++.+|.| |+
T Consensus 208 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~ 287 (502)
T 3hbx_A 208 AILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGW 287 (502)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEE
Confidence 77 666 89999999999999999 9999999998755421 111111 123799999999999977766 88
Q ss_pred EEeecccccc------c-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Q 010058 298 IFFRKGVKEI------N-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 298 i~~~~~~~~~------~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~ 370 (519)
+++++...+. + +.|+. .......++.....++++.+++..+...++.+..++..+++++|.+
T Consensus 288 ~~~~~~~~l~~~~~~~~~yl~~~-----------~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~ 356 (502)
T 3hbx_A 288 VIWRNKEDLPEELIFHINYLGAD-----------QPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLRE 356 (502)
T ss_dssp EEESSGGGSCGGGCEEECSSSSC-----------EEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCHHHhhHHhccCcccccCC-----------CCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887632110 0 11100 0001112344444567777778777667889999999999999999
Q ss_pred HHHhcC-CEEecCCCCcceeeeeccC-CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHH
Q 010058 371 SLLERG-YDLVSGGTENHLVLVNLRN-KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF 448 (519)
Q Consensus 371 ~L~~~g-~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di 448 (519)
.|.++| ++++.+....+++.+.+.. .+++..++.+.|.+.||.++....|.. ......+|+++...++ ++|+
T Consensus 357 ~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~--~~~~~~lRisv~~~~t----~edi 430 (502)
T 3hbx_A 357 GLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPN--AQHITVLRVVIREDFS----RTLA 430 (502)
T ss_dssp HHHTTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTT--CTTCEEEEEECCTTCC----HHHH
T ss_pred HHHhCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcc--cCCceEEEEEeCCCCC----HHHH
Confidence 999995 8887652334455555543 235667899999999999864433432 1234679999988888 8999
Q ss_pred HHHHHHHHHHHHHHhh
Q 010058 449 EKVAEFFDAAVKLALK 464 (519)
Q Consensus 449 ~~l~~~l~~~l~~~~~ 464 (519)
+.+++.|++++....+
T Consensus 431 d~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 431 ERLVIDIEKVMRELDE 446 (502)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999976644
No 53
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.95 E-value=7.6e-27 Score=237.84 Aligned_cols=330 Identities=12% Similarity=0.037 Sum_probs=228.1
Q ss_pred cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 75 QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 75 ~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
..+.|+|..+++. +++.+.+++.+.+.+.. .+ |+...+..++++.+.+++.+.+|.+.+. .+|.+++|+
T Consensus 28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~~~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~ 98 (370)
T 2z61_A 28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGK-TH------YTDSRGILELREKISELYKDKYKADIIP--DNIIITGGS 98 (370)
T ss_dssp TCCCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHSSCCCCG--GGEEEESSH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHHcCc-cC------CCCCCCCHHHHHHHHHHHHHHhCCCCCh--hhEEECCCh
Confidence 4567899877774 47899999998876521 12 3333445678877778888777754322 358888888
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
+ ++..++.++++|||+|++.++.|.++... +...|..+..++ +|++++++.+++ ++++|++
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~--------~~~~g~~~~~v~---------~d~~~l~~~l~~-~~~~v~~ 160 (370)
T 2z61_A 99 SLGLFFALSSIIDDGDEVLIQNPCYPCYKNF--------IRFLGAKPVFCD---------FTVESLEEALSD-KTKAIII 160 (370)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCTHHHHH--------HHHTTCEEEEEC---------SSHHHHHHHCCS-SEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhHHHH--------HHHcCCEEEEeC---------CCHHHHHHhccc-CceEEEE
Confidence 7 88889999999999999999888765432 222344333332 689999999986 8898888
Q ss_pred c-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccC---CCCC-CCCCCeEEEEcCCCcc--cCCCcceEEeecc
Q 010058 232 G-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAG---VIPS-PFEYADVVTTTTHKSL--RGPRGAMIFFRKG 303 (519)
Q Consensus 232 ~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~---~~~~-p~~~~di~~~S~~K~l--~GprgG~i~~~~~ 303 (519)
+ ++| +|...+.+ |.++|+++|+++|+|++|..+..... +... ...+.|+++.|+||++ +|.|.|++++++
T Consensus 161 ~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~- 238 (370)
T 2z61_A 161 NSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND- 238 (370)
T ss_dssp ESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH-
T ss_pred cCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH-
Confidence 7 666 78999999 99999999999999999875433211 1100 0125789999999997 466789999988
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGG 383 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 383 (519)
++.+.+....... .++++....+++..+++......+++..+++.++++++.+.|.+.|+.++.+
T Consensus 239 -------------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~- 303 (370)
T 2z61_A 239 -------------EIIEAILKLQQNL-FISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNP- 303 (370)
T ss_dssp -------------HHHHHHHHHHHHH-TSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCC-
T ss_pred -------------HHHHHHHHHHhhc-ccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCC-
Confidence 4444443322111 1244555555555555431123457788899999999999999988877553
Q ss_pred CCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..+.+.++.+.. +..++.+.|. ++||.+...... +....+++||+++ ++ +++++++++.|.++++
T Consensus 304 ~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f---~~~~~~~~Ri~~~--~~----~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 304 IGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGF---GSKGKNYIRISYA--NS----YENIKEGLERIKEFLN 369 (370)
T ss_dssp CBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGG---CGGGSSBEEEECC--SC----HHHHHHHHHHHHHHHC
T ss_pred CcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhh---CCCCCCEEEEEEe--CC----HHHHHHHHHHHHHHHh
Confidence 234455556543 5677877775 789999742211 1113568999988 45 7899999999988763
No 54
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.95 E-value=1.3e-26 Score=241.38 Aligned_cols=352 Identities=13% Similarity=0.105 Sum_probs=239.9
Q ss_pred cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 75 QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 75 ~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
..+.|+|..+++. +++.|++++.+.+.+....+|+. ..+..++++.+.+++.+.+|.+.+. .+|++++|+
T Consensus 43 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~la~~~~~~~g~~~~~--~~i~~t~g~ 114 (437)
T 3g0t_A 43 GTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPN------LDGLPELKQEASRFAKLFVNIDIPA--RACVPTVGS 114 (437)
T ss_dssp TCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCC------TTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESHH
T ss_pred CCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCC------CCChHHHHHHHHHHHHHhhCCCCCc--ccEEEeCCH
Confidence 3567899888775 48999999999887522124433 2334678877778887777764322 369999998
Q ss_pred H-HHHHHHHhhc--CCCC--EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCc
Q 010058 153 P-ANFQVYTALL--KPHE--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPK 227 (519)
Q Consensus 153 ~-a~~~~~~all--~pGD--~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~k 227 (519)
+ ++..++.+++ +||| +|+++++.|.++.. .+...|..+..+++ +++++.+|++++++++...+++
T Consensus 115 t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~~--~~~~~~~d~~~l~~~l~~~~~~ 184 (437)
T 3g0t_A 115 MQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKL--------QCRILGQKFESFDL--FEYRGEKLREKLESYLQTGQFC 184 (437)
T ss_dssp HHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHH--------HHHHHTCCCEEEEG--GGGCTTHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHH--------HHHHcCCEEEEEee--cCCCCccCHHHHHHHHhcCCce
Confidence 8 8888999998 9999 99999877766543 22234555555554 4456789999999999444899
Q ss_pred EEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--------CC---CCCCeEEEEcCCCcc-
Q 010058 228 LIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--------SP---FEYADVVTTTTHKSL- 290 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--------~p---~~~~di~~~S~~K~l- 290 (519)
+|+++ ++| +|...+ +++|+++|+++|+++|+|++|...... +..+ .. ....++++.|+||++
T Consensus 185 ~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 263 (437)
T 3g0t_A 185 SIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFR-KDYSHPGEPLYQPSVANYTDNYILALSSSKAFS 263 (437)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTT-SCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTS
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccC-CCcCcccccchhhccCCCCCcEEEEEcCccCCC
Confidence 99887 766 787776 777899999999999999998643322 1111 01 124668999999986
Q ss_pred -cCCCcceEEeeccccc-c-----c-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcC--HhHHHHHHH
Q 010058 291 -RGPRGAMIFFRKGVKE-I-----N-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKT--PEYKAYQEQ 360 (519)
Q Consensus 291 -~GprgG~i~~~~~~~~-~-----~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~--~~~~~~~~~ 360 (519)
+|.|.|++++++++.. . + ..++...+.+ +..... ....+++....+++..+++.... ..+++..++
T Consensus 264 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 339 (437)
T 3g0t_A 264 YAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEAL---SSSALY-ALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIE 339 (437)
T ss_dssp CGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHH---HTTHHH-HHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHH
T ss_pred CccceeEEEEECHHHhhhhhhcccccccccchhHHH---HHHHHh-hhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHH
Confidence 5777899999873210 0 0 0000000000 221111 01134566666666667765421 117888999
Q ss_pred HHHHHHHHHHHHHhcCCEEe------cCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEe
Q 010058 361 VLSNSSKFARSLLERGYDLV------SGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRM 433 (519)
Q Consensus 361 ~~~~~~~l~~~L~~~g~~~~------~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi 433 (519)
+.++++.+.+.|++.|+.++ .+....+++++.+. +.+..++.+.|.+.||.+. |+.. +...++++||
T Consensus 340 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gi~v~----~~~~~~~~~~~~iRi 413 (437)
T 3g0t_A 340 YGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYK--GMDSSKLIEKFVRYGMCAI----TLKTTGSKRNEAMRI 413 (437)
T ss_dssp HHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEET--TCCHHHHHHHHHHTTEECE----ESTTTTCCCTTCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecC--CCCHHHHHHHHHHcCeEEe----eccccCCCCCCEEEE
Confidence 99999999999999998887 23133556677765 5678889999988999997 4443 2222377999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+++.. + ++|++++++.|.++++
T Consensus 414 s~~~~-~----~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 414 CTSLL-P----ESQFPDLEKRLQMLNA 435 (437)
T ss_dssp ECSSS-C----GGGHHHHHHHHHHHHH
T ss_pred EEecC-C----HHHHHHHHHHHHHHHh
Confidence 98854 5 7999999999998875
No 55
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.95 E-value=5.2e-27 Score=239.58 Aligned_cols=335 Identities=13% Similarity=0.076 Sum_probs=230.4
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcc-eEEeCCcH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGV-NVQSLSGS 152 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~-~V~~~sGs 152 (519)
.+.|+|..+++. +++.+.+++.+.+.+... ..|+...+..++++.+.+++.+.+|++.+. . +|.+++|+
T Consensus 25 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~--~~~v~~~~g~ 96 (376)
T 2dou_A 25 VGLIDLSIGSTDLPPPEAPLKALAEALNDPTT------YGYCLKSCTLPFLEEAARWYEGRYGVGLDP--RREALALIGS 96 (376)
T ss_dssp CCCEECSSCCCCCCCCHHHHHHHHHHTTCGGG------SSCCCHHHHHHHHHHHHHHHHHHHSCCCCT--TTSEEEESSH
T ss_pred CCEEeccCCCCCCCCCHHHHHHHHHHHhCCCc------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CccEEEcCCc
Confidence 457899888775 478999999988754211 123433567788877778887777985211 1 58999998
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
+ ++..++.++++|||+|++.++.|.++... +...|..+..++. ++++.+|++++++++++ ++++|++
T Consensus 97 ~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~--------~~~~g~~~~~~~~---~~~~~~d~~~l~~~l~~-~~~~v~l 164 (376)
T 2dou_A 97 QEGLAHLLLALTEPEDLLLLPEVAYPSYFGA--------ARVASLRTFLIPL---REDGLADLKAVPEGVWR-EAKVLLL 164 (376)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSCCHHHHHH--------HHHTTCEEEEECB---CTTSSBCGGGSCHHHHH-HEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCcHhHHHH--------HHHcCCEEEEeeC---CCCCCCCHHHHHHhhcc-CceEEEE
Confidence 7 88889999999999999999777665431 2233544445543 34567899999998875 7999998
Q ss_pred c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC-----CCCeEEEEcCCCcc--cCCCcceEE
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF-----EYADVVTTTTHKSL--RGPRGAMIF 299 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~-----~~~di~~~S~~K~l--~GprgG~i~ 299 (519)
+ ++| +|...+ +++|.++|+++|+++|+|++|..+... +...+.+ ...++++.|+||++ +|+|.|+++
T Consensus 165 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 243 (376)
T 2dou_A 165 NYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYE-GEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFAL 243 (376)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS-SCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEE
T ss_pred CCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccC-CCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEe
Confidence 8 666 787765 678889999999999999998754321 1111111 13578899999987 577889999
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
+++ ++.+.+........ .+++....+++..+++.. ...+++.++++.++++.+.+.|++. +.+
T Consensus 244 ~~~--------------~~~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~ 306 (376)
T 2dou_A 244 GSE--------------EALARLERVKGVID-FNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV-LSL 306 (376)
T ss_dssp ECH--------------HHHHHHHHHHHHHC-CCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT-SEE
T ss_pred cCH--------------HHHHHHHHHHHhcc-cCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh-cCc
Confidence 887 45554433222111 233455555555566542 2346788889999999999999987 766
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
..+ ..+.++++.+.. +.+..++.+.|.+.||.++..... ++...+++||++.. + +++++++++.|.+++
T Consensus 307 ~~~-~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f---~~~~~~~~Ris~~~--~----~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 307 LPP-RATMYLWGRLPE-GVDDLEFGLRLVERGVALAPGRGF---GPGGKGFVRIALVR--P----LEELLEAAKRIREAL 375 (376)
T ss_dssp CCC-CBSSEEEEECCT-TCCHHHHHHHHHHTTEECEEGGGG---CGGGTTEEEEECCS--C----HHHHHHHHHHHHHTC
T ss_pred cCC-CeeEEEEEECCC-CCCHHHHHHHHHHCCEEEcCchhh---CCCCCCeEEEEecC--C----HHHHHHHHHHHHHHh
Confidence 543 234556676643 456777888887779999742211 11235789999864 4 789999999887754
No 56
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.95 E-value=4.1e-27 Score=243.40 Aligned_cols=364 Identities=12% Similarity=0.062 Sum_probs=243.4
Q ss_pred hhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA 131 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~ 131 (519)
++++..+.+.++..+.+.. +..+.|+|..+++. +++.+.+++.+.+.+. ..+| +...+..++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y------~~~~g~~~l~~~la~~~ 75 (411)
T 2o0r_A 4 VSRLRPYATTVFAEMSALA-TRIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQY------PPGPGSAPLRRAIAAQR 75 (411)
T ss_dssp CGGGGGGSSCHHHHHHHHH-HTTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSC------CCTTCCHHHHHHHHHHH
T ss_pred hhHhHhcCccHHHHHHHHh-hcCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCC------CCCCCCHHHHHHHHHHH
Confidence 3445566666666666543 34457899877664 5789999999988652 1123 33344567888888888
Q ss_pred HHHcCCCCCCCcc-eEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCC
Q 010058 132 LDAFQLDPAKWGV-NVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDEST 209 (519)
Q Consensus 132 ~~~~g~~~~~~~~-~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~ 209 (519)
.+.+|.+.+. . +|++++|++ |+..++.++++|||+|+++++.|.++... +...|..+..++++.+..+
T Consensus 76 ~~~~g~~~~~--~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~--------~~~~g~~~~~v~~~~~~~~ 145 (411)
T 2o0r_A 76 RRHFGVDYDP--ETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPV--------VAMAGAHRVTVPLVPDGRG 145 (411)
T ss_dssp HHHHCCCCCT--TTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHH--------HHHTTCEEEEEECEEETTE
T ss_pred HHHcCCCCCC--CceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHH--------HHHcCCEEEEeeccccccC
Confidence 8888864221 2 488898887 88889999999999999999888776431 2233544555554321124
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC---C---CC
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP---F---EY 278 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p---~---~~ 278 (519)
+.+|++++++++++ ++++|+++ ++| +|...+ +++|+++|+++|+++|+|++|..+... +..+.+ + .+
T Consensus 146 ~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~ 223 (411)
T 2o0r_A 146 FALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFD-HARHLPLAGFDGMAE 223 (411)
T ss_dssp EECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT-TCCCCCGGGSTTTGG
T ss_pred CCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCcChhhccCCCC
Confidence 67999999999986 89999887 656 787765 589999999999999999998754332 111111 1 25
Q ss_pred CeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 279 ADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 279 ~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
.|+++.|+||++ +|.|.|++++++ ++.+.+........ .+.+....+++..+++.. ...+++
T Consensus 224 ~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~~-~~~~~~ 287 (411)
T 2o0r_A 224 RTITISSAAKMFNCTGWKIGWACGPA--------------ELIAGVRAAKQYLS-YVGGAPFQPAVALALDTE-DAWVAA 287 (411)
T ss_dssp GEEEEEEHHHHTTCTTTCEEEEECCH--------------HHHHHHHHHHHHHT-SCCCTTHHHHHHHHHHHC-HHHHHH
T ss_pred CEEEEeechhhcCCccceEEEEeeCH--------------HHHHHHHHHHhhcc-CCCChHHHHHHHHHHhCC-hHHHHH
Confidence 799999999987 466779999987 44444432211101 122333445555666654 334688
Q ss_pred HHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC-CCcHHHHHHhh-cccCeEEcccccC-CCC-------CCC
Q 010058 357 YQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK-GIDGSRVEKVL-ESVHIAANKNTVP-GDV-------SAM 426 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~L-~~~gI~v~~~~~p-~~~-------~~~ 426 (519)
.++++.++++++.+.|++.|+.+..+ ..+.++++.+... +.+..++.+.| +++||.+...... +.. ...
T Consensus 288 ~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~ 366 (411)
T 2o0r_A 288 LRNSLRARRDRLAAGLTEIGFAVHDS-YGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADV 366 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCEECCC-CBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CC
T ss_pred HHHHHHHHHHHHHHHHHHcCCEecCC-CeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccC
Confidence 88999999999999999889887654 2345667776432 24567777765 4789999743211 100 011
Q ss_pred CCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 427 VPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 427 ~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..+.+||++.. + ++|++++++.|.++++
T Consensus 367 ~~~~iRis~~~--~----~e~i~~~~~~l~~~~~ 394 (411)
T 2o0r_A 367 WNHLVRFTFCK--R----DDTLDEAIRRLSVLAE 394 (411)
T ss_dssp GGGCEEEECCS--C----HHHHHHHHHHHGGGGC
T ss_pred CCCeEEEEecC--C----HHHHHHHHHHHHHHHh
Confidence 34679999752 4 7899999999988664
No 57
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=9.9e-27 Score=238.83 Aligned_cols=331 Identities=14% Similarity=0.084 Sum_probs=228.8
Q ss_pred cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 75 QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 75 ~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.++.|+|..+++. +++.+.+++.+.+.... .+ |+...+..++++.+.+++.+.+|++.+. .+|++++|+
T Consensus 40 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~lr~~la~~~~~~~g~~~~~--~~v~~~~g~ 110 (389)
T 1o4s_A 40 GEDVINLTAGEPDFPTPEPVVEEAVRFLQKGE-VK------YTDPRGIYELREGIAKRIGERYKKDISP--DQVVVTNGA 110 (389)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHTTCC-CC------CCCTTCCHHHHHHHHHHHHHHHTCCCCG--GGEEEESHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCCHHHHHHHHHHHHHHhCCCCCH--HHEEEecCH
Confidence 3467899877764 47899999998876521 12 3333445778877778888777873211 368999988
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi 230 (519)
+ ++..++.++++|||+|+++++.|.++.. .+...|..+..++. ++ +++.+|++++++++++ ++++|+
T Consensus 111 t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~--~~~~~~~~d~~~l~~~l~~-~~~~v~ 179 (389)
T 1o4s_A 111 KQALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGGTVNVVET--FMSKNFQPSLEEVEGLLVG-KTKAVL 179 (389)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEEC--CGGGTTCCCHHHHHHTCCT-TEEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEec--CCccCCCCCHHHHHHhccc-CceEEE
Confidence 7 8888999999999999999988776543 22234554555543 33 3568999999999986 889888
Q ss_pred Ec-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--C---CCCCeEEEEcCCCcc--cCCCcceE
Q 010058 231 AG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--P---FEYADVVTTTTHKSL--RGPRGAMI 298 (519)
Q Consensus 231 ~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p---~~~~di~~~S~~K~l--~GprgG~i 298 (519)
++ ++| +|...+ +++|.++|+++|+++|+|++|..+... +...+ . ..+.|++++|+||++ +|.|.|++
T Consensus 180 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~-g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l 258 (389)
T 1o4s_A 180 INSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYT-DEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYL 258 (389)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCS-SCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEE
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEE
Confidence 87 666 787766 899999999999999999998754432 11000 0 125799999999997 46677999
Q ss_pred EeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCE
Q 010058 299 FFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYD 378 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 378 (519)
++++ ++.+.+......+..+. +.....+...+++ . ++++..+++.++++++.+.|++.|+.
T Consensus 259 ~~~~--------------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~---~-~~~~~~~~~~~~~~~l~~~L~~~g~~ 319 (389)
T 1o4s_A 259 ISSE--------------KVATAVSKIQSHTTSCI-NTVAQYAALKALE---V-DNSYMVQTFKERKNFVVERLKKMGVK 319 (389)
T ss_dssp ECCH--------------HHHHHHHHHHHHHTCSC-CHHHHHHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EeCH--------------HHHHHHHHHhhhcccCC-CHHHHHHHHHHHh---c-cHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 9987 44444433222211222 3333333333433 2 26788899999999999999998887
Q ss_pred EecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 379 LVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
++.+ ..+.+.++.+. .+..++.+.|. +.||.+.. +.... .++++|+++.. + +++++++++.|.+
T Consensus 320 ~~~~-~~~~~~~~~~~---~~~~~l~~~l~~~~gi~v~~----g~~f~-~~~~~Ris~~~--~----~~~l~~~l~~l~~ 384 (389)
T 1o4s_A 320 FVEP-EGAFYLFFKVR---GDDVKFCERLLEEKKVALVP----GSAFL-KPGFVRLSFAT--S----IERLTEALDRIED 384 (389)
T ss_dssp CCCC-SBSSEEEEECS---SCHHHHHHHHHHHHCEECEE----GGGGT-CTTEEEEECCS--C----HHHHHHHHHHHHH
T ss_pred eecC-CcceEEEEeCC---CCHHHHHHHHHHHCCEEEeC----chhcC-CCCeEEEEEeC--C----HHHHHHHHHHHHH
Confidence 7653 23445566654 35777877775 89999973 32200 13589999873 4 7899999999988
Q ss_pred HHH
Q 010058 458 AVK 460 (519)
Q Consensus 458 ~l~ 460 (519)
+++
T Consensus 385 ~l~ 387 (389)
T 1o4s_A 385 FLN 387 (389)
T ss_dssp HHT
T ss_pred HHh
Confidence 763
No 58
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.95 E-value=1.1e-26 Score=239.69 Aligned_cols=343 Identities=14% Similarity=0.053 Sum_probs=232.4
Q ss_pred cccCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeC
Q 010058 75 QWKGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSL 149 (519)
Q Consensus 75 ~~~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~ 149 (519)
..+.|+|..+++ .+++.+.+++.+.+.+.. .+ |+...+..++++.+.+++.+.+|+..+. .+|+++
T Consensus 37 g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~------y~~~~g~~~l~~~la~~l~~~~g~~~~~--~~v~~t 107 (406)
T 1xi9_A 37 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NY------YGDSEGLPELRKAIVEREKRKNGVDITP--DDVRVT 107 (406)
T ss_dssp TCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CS------CCCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEE
T ss_pred CCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHhcCCCCCH--HHEEEc
Confidence 356789988777 457899999998886521 12 3333445678877778888877754322 368999
Q ss_pred CcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCc
Q 010058 150 SGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPK 227 (519)
Q Consensus 150 sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~k 227 (519)
+|++ |+..++.++++|||+|+++++.|.++.. .+...|..+..++. ++ +++.+|++++++.+++ +++
T Consensus 108 ~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~--~~~~~~~~d~~~l~~~l~~-~~~ 176 (406)
T 1xi9_A 108 AAVTEALQLIFGALLDPGDEILVPGPSYPPYTG--------LVKFYGGKPVEYRT--IEEEDWQPDIDDIRKKITD-RTK 176 (406)
T ss_dssp SHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEEE--EGGGTSEECHHHHHHHCCT-TEE
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEeec--CCCcCCcCCHHHHHHhhCc-Cce
Confidence 9887 8888999999999999999987766543 12233554555554 33 3567899999999987 899
Q ss_pred EEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CC-CCC-eEEEEcCCCccc--CCCcc
Q 010058 228 LIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PF-EYA-DVVTTTTHKSLR--GPRGA 296 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~-~~~-di~~~S~~K~l~--GprgG 296 (519)
+|+++ ++| +|...+ +++|.++|+++|+++|+|++|..+.. .+.... .+ .+. +++++|+||+++ |+|.|
T Consensus 177 ~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 255 (406)
T 1xi9_A 177 AIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLG 255 (406)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCE
T ss_pred EEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHcCCCceEEEEeccccccCCCccEEE
Confidence 88887 556 787665 89999999999999999999876433 211110 01 245 889999999984 67789
Q ss_pred eEE--eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 297 MIF--FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 297 ~i~--~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
+++ ++++.. .++.+.+....... ++++....+++..+++.. ...+++..+++.++++.+.+.|++
T Consensus 256 ~~~~~~~~~~~----------~~l~~~l~~~~~~~--~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 322 (406)
T 1xi9_A 256 YMYFVDPENKL----------SEVREAIDRLARIR--LCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNE 322 (406)
T ss_dssp EEEEECTTCTT----------HHHHHHHHHHHHHT--CCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCchhH----------HHHHHHHHHHHHhh--cCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 988 665100 01222222211111 234444555666677543 344788889999999999999998
Q ss_pred c-CCEEecCCCCcceeeeeccCC-CCcHHHHHHhhc-ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 375 R-GYDLVSGGTENHLVLVNLRNK-GIDGSRVEKVLE-SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 375 ~-g~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
. |+.++.+ ..+.+.++.+... +.+..++.+.|. +.||.+...... +....+++||++. ++ +++++++
T Consensus 323 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f---~~~~~~~lRis~~--~~----~~~i~~~ 392 (406)
T 1xi9_A 323 IPGISTTKP-QGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGF---GEYGAGHFRAVFL--PP----IEILEEA 392 (406)
T ss_dssp STTEECCCC-CBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGG---CGGGTTBEEEECC--SC----HHHHHHH
T ss_pred CCCCeeecC-CeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhc---CCCCCCEEEEEec--CC----HHHHHHH
Confidence 8 8776543 2344455555421 456777877775 899998732211 1123578999986 55 7999999
Q ss_pred HHHHHHHHHH
Q 010058 452 AEFFDAAVKL 461 (519)
Q Consensus 452 ~~~l~~~l~~ 461 (519)
++.|.++++.
T Consensus 393 ~~~l~~~l~~ 402 (406)
T 1xi9_A 393 MDRFEKFMKE 402 (406)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988864
No 59
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=1.5e-26 Score=239.07 Aligned_cols=352 Identities=13% Similarity=0.058 Sum_probs=234.7
Q ss_pred HHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCC
Q 010058 64 IADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAK 141 (519)
Q Consensus 64 ~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~ 141 (519)
+.....+......+.|+|..+++. +++.+.+++ +.+.+.. .+ |+...+..++++.+.+++.+.+|.+.+.
T Consensus 31 ~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~-~~------y~~~~g~~~l~~~la~~~~~~~g~~~~~ 102 (409)
T 2gb3_A 31 LVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEV-VY------YSHSAGIWELREAFASYYKRRQRVDVKP 102 (409)
T ss_dssp GHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSS-CC------CCCTTCCHHHHHHHHHHHHHTSCCCCCG
T ss_pred HHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCC-CC------CCCCCCcHHHHHHHHHHHHHHhCCCCCH
Confidence 334443333333566888877774 578999999 8775421 12 3333445678877778888777754322
Q ss_pred CcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHH
Q 010058 142 WGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEK 219 (519)
Q Consensus 142 ~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~ 219 (519)
.+|.+++|++ |+..++.++++|||+|+++++.|.++.. .+...|..+..+++ ++ +++.+ +++|++
T Consensus 103 --~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~~--~~~~~~~~-~~~l~~ 169 (409)
T 2gb3_A 103 --ENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGVKLIPVTR--RMEEGFAI-PQNLES 169 (409)
T ss_dssp --GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTCEEEEEEC--CGGGTSCC-CTTGGG
T ss_pred --HHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEecc--CCCCCCcc-HHHHHH
Confidence 3588888877 8988999999999999999988766543 22234554555543 32 24445 888888
Q ss_pred HhhhhCCcEEEEc-ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCCCCeEEEEcCCCcc--
Q 010058 220 SAALFRPKLIVAG-ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFEYADVVTTTTHKSL-- 290 (519)
Q Consensus 220 ~i~~~k~klIi~~-~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~~~di~~~S~~K~l-- 290 (519)
++++ ++++|+++ ++| +|... ++++|.++|+++|+++|+|++|..+.......+ ..+...|++++|+||++
T Consensus 170 ~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 248 (409)
T 2gb3_A 170 FINE-RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSA 248 (409)
T ss_dssp GCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTC
T ss_pred hhCc-CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCC
Confidence 8876 88988887 666 77665 589999999999999999999876433211111 01125699999999998
Q ss_pred cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Q 010058 291 RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 291 ~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~ 370 (519)
+|.|.|+++++++ ++.+.+........ +++....+++.++++. ....+++..+++.++++.+.+
T Consensus 249 ~G~r~G~~~~~~~-------------~l~~~l~~~~~~~~--~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 2gb3_A 249 CGARVGCLITRNE-------------ELISHAMKLAQGRL--APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLK 312 (409)
T ss_dssp GGGCCEEEECSCH-------------HHHHHHHHHHHHSC--CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEECcH-------------HHHHHHHHHHhccC--CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHH
Confidence 4667799999872 23333332222222 4455555555666643 233467888899999999999
Q ss_pred HHHhcCCEE-ecCCCCcceeeeeccCCCCcHHHHHHhhccc------CeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 371 SLLERGYDL-VSGGTENHLVLVNLRNKGIDGSRVEKVLESV------HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 371 ~L~~~g~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~------gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
.|++.|+.+ ..+ ..+.+.++.+. +.+..++.+.|.+. ||.+......+......++++||+++ ++
T Consensus 313 ~L~~~g~~~~~~~-~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~--- 384 (409)
T 2gb3_A 313 KLEEHGLKRFTKP-SGAFYITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LE--- 384 (409)
T ss_dssp HHHHTTCCCBCCC-SBSSEEEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SC---
T ss_pred HHHHcCceeeeCC-CeeEEEEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CC---
Confidence 999988877 443 33455566664 45677787777654 99997432111111123578999987 55
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~~ 462 (519)
++|++++++.|.++++..
T Consensus 385 -~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 385 -KDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp -HHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHh
Confidence 799999999999988653
No 60
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.95 E-value=1.3e-26 Score=239.42 Aligned_cols=321 Identities=15% Similarity=0.170 Sum_probs=223.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPH 166 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~-y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pG 166 (519)
.+|.+.+++.+.+.. |..++.+.+. ++..+...+++ +++++++|.+. .+++++|+.++..++.++++||
T Consensus 74 ~~p~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~g 143 (409)
T 3kki_A 74 NHPLIKARLAKSLLE-EQQSLFMSASFLQNDYDKPMIE----KRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPN 143 (409)
T ss_dssp TCHHHHHHHHHHHHS-CCCCCCSBGGGGCSTTTSCHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTT
T ss_pred CCHHHHHHHHHHHHH-cCCCCCccccccCCcHHHHHHH----HHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCC
Confidence 479999999998865 4333333222 22223334444 88888999875 4888999889999999999999
Q ss_pred CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHH
Q 010058 167 ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYAR 244 (519)
Q Consensus 167 D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~ 244 (519)
|.|++.++.|+++... +...|..+. +++ ..|++++++++++.++++|+++ +.| +|...++++
T Consensus 144 d~Vl~~~~~~~~~~~~--------~~~~g~~~~--~~~------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~ 207 (409)
T 3kki_A 144 TNVYIDFFAHMSLWEG--------ARYANAQAH--PFM------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAE 207 (409)
T ss_dssp CEEEEETTSCHHHHHH--------HHHTTCEEE--EEC------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHH
T ss_pred CEEEECCCcCHHHHHH--------HHHcCCeEE--Eec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHH
Confidence 9999999887776542 223343332 222 2689999999987679999998 445 789999999
Q ss_pred HHHHHhhcCCEEEehhhhhhhcccc-CC--C-CCCC-CCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHH
Q 010058 245 IRKVCDKQKAVMLADMAHISGLVAA-GV--I-PSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYE 319 (519)
Q Consensus 245 i~~ia~~~~~~livD~ah~~g~~~~-~~--~-~~p~-~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~ 319 (519)
|+++|++||++||+|++|..|.... +. . ..++ ..+|+++.|+||+++++ ||++++++++ .
T Consensus 208 l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~~--------------~ 272 (409)
T 3kki_A 208 LVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR-AGAIWCNNEV--------------N 272 (409)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS-CEEEEESSSG--------------G
T ss_pred HHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC-ceEEEECHHH--------------H
Confidence 9999999999999999997654321 10 0 0001 15789999999999766 8999998842 2
Q ss_pred HHhhhcccCCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCC
Q 010058 320 DKINQAVFPGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGI 398 (519)
Q Consensus 320 ~~i~~~~~~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~ 398 (519)
+.+.....+.. .++++...++++.++++.... .+++++++.++++++.+.|++.|+.+.. ...++++.+.. ..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~---~~~~~~~~~~~-~~ 346 (409)
T 3kki_A 273 RCVPFISYPAIFSSTLLPYEAAGLETTLEIIES--ADNRRQHLDRMARKLRIGLSQLGLTIRS---ESQIIGLETGD-ER 346 (409)
T ss_dssp GTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHTTTCCCCC---SSSEEEEEEES-HH
T ss_pred HHHHHhCcCccccCCCcHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCccCC---CCCEEEEEeCC-HH
Confidence 22211111100 123455666666677776532 3678889999999999999999887652 33455665542 12
Q ss_pred cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 399 DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 399 ~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+..++.+.|.+.||.++....|. .+...++|||+++..++ ++|++++++.|++++..
T Consensus 347 ~~~~~~~~L~~~Gv~v~~~~~~~--~~~~~~~iRi~~~~~~t----~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 347 NTEKVRDYLESNGVFGSVFCRPA--TSKNKNIIRLSLNSDVN----DEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHHHHHTTEECEEECTTS--SCTTCEEEEEECCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCceEeeeCCCC--cCCCCcEEEEEccCCCC----HHHHHHHHHHHHHHHhc
Confidence 35567788878899987433222 23346789999988777 89999999999998864
No 61
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.95 E-value=1.3e-26 Score=238.37 Aligned_cols=339 Identities=13% Similarity=0.107 Sum_probs=234.0
Q ss_pred cCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCcH
Q 010058 77 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sGs 152 (519)
+.|+|..+++ .+++.|.+++.+.+.+.. .+| +.. ..++++.+.+++.+.+|. ++ .+|++++|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~--~~~l~~~la~~l~~~~g~~~~~----~~v~~t~g~ 98 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDETV-LGY------TGP--TEEYKKTVKKWMKDRHQWDIQT----DWIINTAGV 98 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHCC-CSS------BCC--CHHHHHHHHHHHHHHHCCCCCG----GGEEEESSH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcCC-CCC------CCC--cHHHHHHHHHHHHHHhCCCCCh----hhEEEcCCH
Confidence 5678877776 357899999999886421 122 222 467777777888888884 44 358999998
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
+ |+..++.++++|||+|++.++.|.++... +...|..+..++...+..++.+|++++++++++.++++|++
T Consensus 99 ~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~--------~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (399)
T 1c7n_A 99 VPAVFNAVREFTKPGDGVIIITPVYYPFFMA--------IKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLF 170 (399)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSSCCTHHHHH--------HHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCcHhHHHH--------HHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEE
Confidence 7 88889999999999999998777665432 22234444444432111134699999999998448899888
Q ss_pred c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC-------CCCeEEEEcCCCcc--cCCCcce
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF-------EYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~-------~~~di~~~S~~K~l--~GprgG~ 297 (519)
+ ++| +|...+ +++|+++|+++|+++|+|++|..... .+....++ ...++++.|+||++ +|+|.|+
T Consensus 171 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 249 (399)
T 1c7n_A 171 CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIM-PGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSN 249 (399)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBC-TTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEE
T ss_pred cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccccccc-CCCCcccHHHcCccccCcEEEEEeChhhccccchheEE
Confidence 7 666 788877 89999999999999999999875332 12111111 13468899999987 5677899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh-c-
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE-R- 375 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~- 375 (519)
++++++ ++.+.+.....+...++++....+++.++++.. ...+++..+++.++++++.+.|++ +
T Consensus 250 ~~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~ 315 (399)
T 1c7n_A 250 IIIKNP-------------DIRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHP 315 (399)
T ss_dssp EECCCH-------------HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred EEECCH-------------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999753 355544433222223355666666666677643 334688888999999999999998 5
Q ss_pred CCEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 376 GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
|+.++.+ ..+.+.++.+...+.+..++.+.|. ++||.++. +.. ++..++++||+++.. +++++++++
T Consensus 316 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~----g~~~~~~~~~~iRis~~~~------~~~l~~~l~ 384 (399)
T 1c7n_A 316 EIKAPLI-EGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDE----GYIFGDGGIGFERINLAAP------SSVIQESLE 384 (399)
T ss_dssp TSBCCCC-SBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEE----GGGGCGGGTTEEEEECCSC------HHHHHHHHH
T ss_pred CCeEecC-CceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeC----ccccCCCCCCeEEEEeccC------HHHHHHHHH
Confidence 7776543 3344556676543456778888885 78999973 332 222357899998742 688999999
Q ss_pred HHHHHHHHH
Q 010058 454 FFDAAVKLA 462 (519)
Q Consensus 454 ~l~~~l~~~ 462 (519)
.|.++++..
T Consensus 385 ~l~~~l~~~ 393 (399)
T 1c7n_A 385 RLNKALKDL 393 (399)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998888643
No 62
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.95 E-value=2e-26 Score=236.02 Aligned_cols=355 Identities=12% Similarity=0.118 Sum_probs=238.7
Q ss_pred hhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010058 57 LEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA 134 (519)
Q Consensus 57 l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~ 134 (519)
+..+.+.++..+.... ...+.|+|..+++. +++.+.+++.+.+.+.. .+| +...+..++++.+.+++++.
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~l~~~la~~l~~~ 83 (386)
T 1u08_A 12 LPQLGTTIFTQMSALA-QQHQAINLSQGFPDFDGPRYLQERLAHHVAQGA-NQY------APMTGVQALREAIAQKTERL 83 (386)
T ss_dssp CCCCCCCHHHHHHHHH-HHTTCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSC------CCTTCCHHHHHHHHHHHHHH
T ss_pred hhcCCccHHHHHHHHH-hcCCeEEecCCCCCCCCCHHHHHHHHHHHHhhc-cCC------CCCCCCHHHHHHHHHHHHHH
Confidence 3344455555544432 23457888877653 57899999998886521 123 32234567887887888888
Q ss_pred cCCCCCCCcc-eEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCC
Q 010058 135 FQLDPAKWGV-NVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYI 212 (519)
Q Consensus 135 ~g~~~~~~~~-~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~i 212 (519)
+|.+.+. . +|.+++|++ ++..++.++++|||+|++.++.|.++.. .+...|..+..++ .+++++.+
T Consensus 84 ~g~~~~~--~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~ 151 (386)
T 1u08_A 84 YGYQPDA--DSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGGIVKRMA--LQPPHFRV 151 (386)
T ss_dssp HSCCCCT--TTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CCTTTCCC
T ss_pred hCCCCCC--CCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEee--cCcccCcC
Confidence 8864221 2 488888887 8888999999999999999988876543 1223344444444 44445789
Q ss_pred CHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC------CCCeE
Q 010058 213 DYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF------EYADV 281 (519)
Q Consensus 213 D~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~------~~~di 281 (519)
|++++++++.+ ++++|+++ ++| +|...+ +++|.++|+++|+++|+|++|...... +....++ .+.|+
T Consensus 152 d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~~~i 229 (386)
T 1u08_A 152 DWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFS-QQGHASVLAHPQLRERAV 229 (386)
T ss_dssp CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCC-SSCCCCGGGSHHHHTTEE
T ss_pred CHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccC-CCCCcChhcccCccCcEE
Confidence 99999999975 89999887 656 787764 689999999999999999998653221 1111111 14789
Q ss_pred EEEcCCCccc--CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHH
Q 010058 282 VTTTTHKSLR--GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE 359 (519)
Q Consensus 282 ~~~S~~K~l~--GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~ 359 (519)
++.|+||+++ |.|.|++++++ ++.+.+....... ..+++....+++..+++.. ...+++.++
T Consensus 230 ~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~~-~~~~~~~~~~a~~~~l~~~-~~~~~~~~~ 293 (386)
T 1u08_A 230 AVSSFGKTYHMTGWKVGYCVAPA--------------PISAEIRKVHQYL-TFSVNTPAQLALADMLRAE-PEHYLALPD 293 (386)
T ss_dssp EEEEHHHHTTCGGGCCEEEECCH--------------HHHHHHHHHHHHH-TSSCCHHHHHHHHHHHHHC-THHHHTHHH
T ss_pred EEecchhhcCCcccceEEEEcCH--------------HHHHHHHHHHHhh-ccCCChHHHHHHHHHHhCC-cHHHHHHHH
Confidence 9999999874 67789999987 4444443321111 1233444556666777754 445688889
Q ss_pred HHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCC-CcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCc
Q 010058 360 QVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKG-IDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPA 437 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~ 437 (519)
++.++++.+.+.|++.|+.+..+ ..++++++.+...+ .+..++.+.| +++||.++.....+. .+..++++||++.
T Consensus 294 ~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~~~iRis~~- 370 (386)
T 1u08_A 294 FYRQKRDILVNALNESRLEILPC-EGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCA-DPFPHKLIRLCFA- 370 (386)
T ss_dssp HHHHHHHHHHHHTTSSSCEECCC-CBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCS-SCCCSCEEEEECC-
T ss_pred HHHHHHHHHHHHHHHCCCeecCC-CceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCC-CCCCCCEEEEEEc-
Confidence 99999999999999889887654 23456677764321 4567777766 478999974221110 1124578999986
Q ss_pred cccCCCCHHHHHHHHHHHHH
Q 010058 438 LTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 438 ~ttrg~~~~di~~l~~~l~~ 457 (519)
++ ++|++++++.|.+
T Consensus 371 -~~----~~~i~~~~~~l~~ 385 (386)
T 1u08_A 371 -KK----ESTLLAAAERLRQ 385 (386)
T ss_dssp -SC----HHHHHHHHHHHTT
T ss_pred -CC----HHHHHHHHHHHhh
Confidence 34 7999999888753
No 63
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.95 E-value=1.5e-25 Score=228.22 Aligned_cols=325 Identities=14% Similarity=0.101 Sum_probs=232.0
Q ss_pred eeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 79 LELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 79 i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
|+|..++++ +++.+.+++.+.+.+... ....|+...+ .++++.+.+++.+.+|...+. .+|.+++|++ ++
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~----~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~--~~v~~~~G~~~al 105 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIAT----ELNRYPERDA-VELRDELAAYITKQTGVAVTR--DNLWAANGSNEIL 105 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGG----GTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCG--GGEEEESHHHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhccc----ccccCCCccH-HHHHHHHHHhhhhcccCCCCh--HhEEECCChHHHH
Confidence 889888874 578999999988865210 0112232233 578877777777776653221 3699999988 78
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
..++.++++|||+|+++++.|.++... +...|..+..++ .+ +++.+|++++++++++.++++|+++ ++
T Consensus 106 ~~~~~~l~~~gd~Vl~~~~~y~~~~~~--------~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 174 (369)
T 3cq5_A 106 QQLLQAFGGPGRTALGFQPSYSMHPIL--------AKGTHTEFIAVS--RG-ADFRIDMDVALEEIRAKQPDIVFVTTPN 174 (369)
T ss_dssp HHHHHHHCSTTCEEEEEESSCTHHHHH--------HHHTTCEEEEEE--CC-TTSSCCHHHHHHHHHHHCCSEEEEESSC
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHH--------HHHcCCEEEEec--CC-cCCCCCHHHHHHHhhccCCCEEEEeCCC
Confidence 788999999999999999888665431 223344444444 44 4568999999999886589999887 66
Q ss_pred c-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC-CCCC-CeEEEEcCCCcc--cCCCcceEEeecccccccc
Q 010058 235 A-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS-PFEY-ADVVTTTTHKSL--RGPRGAMIFFRKGVKEINK 309 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~-p~~~-~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~ 309 (519)
| +|...|.+++.++|+.+++++|+|++|..+......... .-.+ .++++.|+||++ +|.|.|++++++
T Consensus 175 nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------- 247 (369)
T 3cq5_A 175 NPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP------- 247 (369)
T ss_dssp TTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT-------
T ss_pred CCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH-------
Confidence 6 899999999999999999999999998765421110000 0013 569999999998 466779999987
Q ss_pred cCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCccee
Q 010058 310 QGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLV 389 (519)
Q Consensus 310 ~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 389 (519)
++.+.+.....+ .+++....+++..+++.. ..+++..+++.++++++.+.|++.|+.+..+ ..+++
T Consensus 248 -------~~~~~l~~~~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~ 313 (369)
T 3cq5_A 248 -------AFIDAVMLVRLP---YHLSALSQAAAIVALRHS--ADTLGTVEKLSVERVRVAARLEELGYAVVPS--ESNFV 313 (369)
T ss_dssp -------HHHHHHHTTSCT---TCSCHHHHHHHHHHHHTH--HHHHTHHHHHHHHHHHHHHHHHHHTCEEECC--SSSEE
T ss_pred -------HHHHHHHHcCCC---CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECCC--CCeEE
Confidence 556655443322 245566666666666642 3457888899999999999999889888643 34566
Q ss_pred eeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 390 LVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 390 ~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++.+. .+..++.+.|.++||.+. |+. .++++|++++ + ++|++++++.|.+++.
T Consensus 314 ~~~~~---~~~~~l~~~l~~~gi~v~----~~~----~~~~iRis~~---~----~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 314 FFGDF---SDQHAAWQAFLDRGVLIR----DVG----IAGHLRTTIG---V----PEENDAFLDAAAEIIK 366 (369)
T ss_dssp EEECC---SSHHHHHHHHHHTTEECB----CCS----CTTEEEEECC---C----HHHHHHHHHHHHHHHT
T ss_pred EEECC---CCHHHHHHHHHHCCEEEE----ECC----CCCeEEEEeC---C----HHHHHHHHHHHHHHHh
Confidence 66653 367788888889999996 441 2478999976 4 7999999999998764
No 64
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=4.8e-28 Score=246.40 Aligned_cols=336 Identities=14% Similarity=0.116 Sum_probs=227.4
Q ss_pred cCeeecC--CCCCCcHHHHHHHhhHhhhccCCCCC--CCCCCCCchhHHHHHHHHHHH-HHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIP--SENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKR-ALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a--~en~~~~~V~ea~~~~l~~~~~~g~p--~~~~y~~~~~~~~le~~~~~~-~~~~~g~~~~~~~~~V~~~sG 151 (519)
+.+.|.. +.+++++.|.+++.+.+.+....++. ....+...+...+++ ++ +++++|.+ +|.+++|
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~la~~~~~~------~v~~~~g 77 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFI----HNQLPKFLGCD------VARVTNG 77 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHH----HTHHHHHTTSS------EEEEESS
T ss_pred CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHH----HHHHHHHcCCC------EEEEeCC
Confidence 3456644 35678999999999887652111111 111122223344444 88 88999986 3888888
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh----hCC
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL----FRP 226 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~----~k~ 226 (519)
++ |+..++.++++|||+|+++++.|.++... +...|..+..++++.+ +++.+|++++++.+++ .++
T Consensus 78 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~--------~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~ 148 (371)
T 2e7j_A 78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYVA--------AERAGLNIALVPKTDY-PDYAITPENFAQTIEETKKRGEV 148 (371)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH--------HHHTTCEEEEECCCCT-TTCCCCHHHHHHHHHHHTTTSCE
T ss_pred hHHHHHHHHHHHhCCCCEEEEccCcchHHHHH--------HHHcCCeEEEeecccC-CCCCcCHHHHHHHHHhhcccCCe
Confidence 76 99889999999999999999888776543 2233555555552244 3478999999999984 278
Q ss_pred cEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCC-CcceEEeecc
Q 010058 227 KLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGP-RGAMIFFRKG 303 (519)
Q Consensus 227 klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gp-rgG~i~~~~~ 303 (519)
++|+++ ++| +|...|+++|.++|+++|+++|+|++|..|......... ++|++++|+||++.++ ++|+++++++
T Consensus 149 ~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~di~~~s~sK~~~~~~~~G~~~~~~~ 225 (371)
T 2e7j_A 149 VLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEI---GADFIVGSGHKSMAASGPIGVMGMKEE 225 (371)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHH---TCSEEEEEHHHHSSCCSSCEEEEECTT
T ss_pred EEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhc---CCCEEEecCCcCCCCCCCcEEEEEech
Confidence 998888 555 889999999999999999999999999876543221111 4799999999998765 4599999884
Q ss_pred cccccccCcchhhhHHHH-hhhcccCCC------CCCccHHHHHHHHHHHHHhcCHhHHHHHHHH--HHHHHHHHHHHHh
Q 010058 304 VKEINKQGQEVMYAYEDK-INQAVFPGL------QGGPHNHTISGLAVALKQVKTPEYKAYQEQV--LSNSSKFARSLLE 374 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~-i~~~~~~~~------~g~~~~~~iaal~~al~~~~~~~~~~~~~~~--~~~~~~l~~~L~~ 374 (519)
. .+. +......+. .++++...++++.++++.+.. ++.+++ .++++++.+.|++
T Consensus 226 ~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~ 287 (371)
T 2e7j_A 226 W--------------AEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEK 287 (371)
T ss_dssp T--------------TTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHH
T ss_pred h--------------hhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 2 222 222111111 356666777777777765432 566777 8999999999998
Q ss_pred cCCEEecCCC-CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEE-eccCcc-ccCCCCHHHHHH
Q 010058 375 RGYDLVSGGT-ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIR-MGTPAL-TSRGFVEEDFEK 450 (519)
Q Consensus 375 ~g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iR-i~~~~~-ttrg~~~~di~~ 450 (519)
.|+.++.+.. ..+++++.+. +..++.+.|.+.||.+.. ..++.. ....++.+| ++++.. ++ ++|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~----~~~i~~ 358 (371)
T 2e7j_A 288 LGIKQLGDNPHNHDLMFFHAE----VLYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLS----DEEVDY 358 (371)
T ss_dssp TTCEEESSSSCCSSEEEEECH----HHHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCC----HHHHHH
T ss_pred cCcEEecCCCccCceEEEECC----CHHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCC----HHHHHH
Confidence 8988876421 2456666653 567788888899999863 111000 011256899 998876 66 899999
Q ss_pred HHHHHHHHHHH
Q 010058 451 VAEFFDAAVKL 461 (519)
Q Consensus 451 l~~~l~~~l~~ 461 (519)
+++.|+++++.
T Consensus 359 ~~~~l~~~~~~ 369 (371)
T 2e7j_A 359 VLNAFKEIIEK 369 (371)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988753
No 65
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.95 E-value=1.1e-26 Score=239.47 Aligned_cols=341 Identities=11% Similarity=0.024 Sum_probs=233.1
Q ss_pred CeeecCC-CC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 78 GLELIPS-EN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 78 ~i~L~a~-en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
.|+|..+ .+ ++++.|++++.+.+.+....+| +...+..++++.+++++++++|.+.+. ..+|++++|++
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~l~~~l~~~l~~~~g~~~~~-~~~i~~~~g~~~ 113 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAY------TEYRGDLGIRDLLAPRLAAFTGAPVDA-RDGLIITPGTQG 113 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHS------CCTTCCHHHHHHHHHHHHHHHTSCCCT-TTSEEEESHHHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCc------CCCCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEeCCcHH
Confidence 5788653 33 3688999999998865211122 222334567777779999999985210 01488888887
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeee---CCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL---DESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~---d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
++..++.++++|||+|++.++.|.++.. .+...|..+..+++.. +++++.+|++++++++++ ++++|+
T Consensus 114 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~ 184 (407)
T 3nra_A 114 ALFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFL 184 (407)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEE
T ss_pred HHHHHHHHhCCCCCEEEEcCCcccchHH--------HHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEEE
Confidence 8888999999999999999988776543 2233455555555421 125678999999999987 899888
Q ss_pred Ec-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC-------CCCeEEEEcCCCcc--cCCCcc
Q 010058 231 AG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF-------EYADVVTTTTHKSL--RGPRGA 296 (519)
Q Consensus 231 ~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~-------~~~di~~~S~~K~l--~GprgG 296 (519)
++ ++| +|...+ +++|+++|++||+++|+|++|..+... +....++ ...++++.|+||++ .|.|.|
T Consensus 185 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~-g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 263 (407)
T 3nra_A 185 FSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYA-GASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLG 263 (407)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCT-TCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCE
T ss_pred EcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEE
Confidence 77 666 788887 899999999999999999998754322 1111111 14568999999986 477789
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER- 375 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 375 (519)
++++++ ++.+.+........ .+++....+++..+++. ....+++..+++.++++.+.+.|++.
T Consensus 264 ~~~~~~--------------~~~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~ 327 (407)
T 3nra_A 264 VAFGSR--------------AIIARMEKLQAIVS-LRAAGYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCE 327 (407)
T ss_dssp EEEECH--------------HHHHHHHHHHHHHT-SSSCHHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred EEEcCH--------------HHHHHHHHHHhhhc-cCCChHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999987 44444433222111 22333334333333332 12346888899999999999999998
Q ss_pred CCEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 376 GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
|+.++.+ ....+.++.+...+.+..++.+.|. ++||.++....+ ++...+++||++.. + +++++++++.
T Consensus 328 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~---~~~~~~~iRis~~~--~----~~~i~~~~~~ 397 (407)
T 3nra_A 328 GVFARTP-QAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEF---SPHTADSVRLNFSQ--D----HEAAVAAARR 397 (407)
T ss_dssp TCBCCCC-SBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGT---CTTCTTBEEEECCS--C----HHHHHHHHHH
T ss_pred CceeccC-CeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhh---CCCCCCEEEEEeCC--C----HHHHHHHHHH
Confidence 8877554 2345666766554567788888775 579999743222 23456889999873 5 7999999999
Q ss_pred HHHHHHH
Q 010058 455 FDAAVKL 461 (519)
Q Consensus 455 l~~~l~~ 461 (519)
|.++++.
T Consensus 398 l~~~~~~ 404 (407)
T 3nra_A 398 IVTLVER 404 (407)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998864
No 66
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.95 E-value=2.7e-26 Score=237.41 Aligned_cols=339 Identities=13% Similarity=0.133 Sum_probs=230.4
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sG 151 (519)
.+.|+|..+++. +++.+.+++.+.+.+....+ |+...+..++++.+.+++.+.+|. ++++ +|.+++|
T Consensus 37 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~---~v~~t~g 107 (412)
T 2x5d_A 37 EDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHG------YSTSRGIPRLRRAISHWYRDRYDVQIDPES---EAIVTIG 107 (412)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHTC---------------CTTCCHHHHHHHHHHHHHHHCCCCCTTT---SEEEESC
T ss_pred CCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCC------CCCCCCcHHHHHHHHHHHHHHhCCCCCCCc---CEEEcCC
Confidence 456899887764 57899999988775421112 332344567887777777777786 3311 4888888
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klI 229 (519)
++ |+..++.++++|||+|++.++.|.++... +...|..+..++ .+++ ++.+|++++++++++ ++++|
T Consensus 108 ~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~--------~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v 176 (412)
T 2x5d_A 108 SKEGLAHLMLATLDHGDTILVPNPSYPIHIYG--------AVIAGAQVRSVP--LVPGIDFFNELERAIRESIP-KPRMM 176 (412)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH--------HHHHTCEEEEEE--CSTTSCHHHHHHHHHHTEES-CCSEE
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCchhHHHH--------HHHcCCEEEEee--cCCccCCCCCHHHHHHhccc-CceEE
Confidence 87 88889999999999999999887665432 223344444444 4433 345899999998875 89999
Q ss_pred EEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCC---CCCeEEEEcCCCcc--cCCCcce
Q 010058 230 VAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPF---EYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 230 i~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~---~~~di~~~S~~K~l--~GprgG~ 297 (519)
+++ ++| +|...+ +++|.++|++||+++|+|++|..+........ ..+ .+.++++.|+||++ +|+|.|+
T Consensus 177 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (412)
T 2x5d_A 177 ILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGF 256 (412)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEE
T ss_pred EECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEE
Confidence 987 666 787665 68899999999999999999876543211100 011 24689999999998 5777899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY 377 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 377 (519)
+++++ ++.+.+....... ..+++....+++..+++.. ...+++..+++.++++.+.+.|++.|+
T Consensus 257 ~~~~~--------------~~~~~l~~~~~~~-~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~ 320 (412)
T 2x5d_A 257 MVGNP--------------ELVSALARIKSYH-DYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREAGW 320 (412)
T ss_dssp EEECH--------------HHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEcCH--------------HHHHHHHHHHhhh-ccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99977 4444443321111 1344555566666667643 345688899999999999999998888
Q ss_pred EEecCCCCcceeeeeccCCCC---cHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGI---DGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVA 452 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~ 452 (519)
.++.+ ..+.++++.+. .++ +..++.+.| +++||.++. +.. ++...+++||+++. + ++++++++
T Consensus 321 ~~~~~-~~g~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~v~~----g~~f~~~~~~~iRis~~~--~----~~~l~~~l 388 (412)
T 2x5d_A 321 MVENP-KASMYVWAKIP-EPYAHLGSLEFAKKLLQDAKVSVSP----GIGFGDYGDDHVRFALIE--N----RDRLRQAV 388 (412)
T ss_dssp CCCCC-SBSSEEEEECC-TTTGGGCHHHHHHHHHHHHCEECEE----GGGGCGGGTTEEEEECCS--C----HHHHHHHH
T ss_pred EecCC-CeeeEEEEEcC-CccCCCCHHHHHHHHHHHCCEEEeC----chhhCCCCCCeEEEEecC--C----HHHHHHHH
Confidence 76543 23455666663 234 566777776 457999973 322 12235789999875 4 78999999
Q ss_pred HHHHHHHHHH
Q 010058 453 EFFDAAVKLA 462 (519)
Q Consensus 453 ~~l~~~l~~~ 462 (519)
+.|.++++..
T Consensus 389 ~~l~~~l~~~ 398 (412)
T 2x5d_A 389 RGIKAMFRAD 398 (412)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998754
No 67
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.95 E-value=4e-26 Score=234.78 Aligned_cols=341 Identities=12% Similarity=0.051 Sum_probs=227.0
Q ss_pred ccCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 76 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPG-ARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 76 ~~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.+.|+|..+.+ ++++.+.+++.+.+.+.. +. ...|+...+..++++.+.+++.+.+|.+.+. .+|++++|+
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~--~~i~~~~g~ 108 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYD----SVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNA--DNLYMTMGA 108 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSC----HHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG--GGEEEESSH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCC----ccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCCh--HHEEEccCH
Confidence 45788887755 357899999998886520 00 0112333444678888888998888853222 369999998
Q ss_pred H-HHHHHHHhhcCCC-CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 153 P-ANFQVYTALLKPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 153 ~-a~~~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
+ ++..++.++++|| |+|++.++.|.++.. .+...|..+..++ .+++++.+|++++++++++ ++++|+
T Consensus 109 ~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~-~~~~v~ 177 (398)
T 3ele_A 109 AASLSICFRALTSDAYDEFITIAPYFPEYKV--------FVNAAGARLVEVP--ADTEHFQIDFDALEERINA-HTRGVI 177 (398)
T ss_dssp HHHHHHHHHHHCCSTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC--CCTTTSSCCHHHHHHTCCT-TEEEEE
T ss_pred HHHHHHHHHHHcCCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEe--cCCcCCcCCHHHHHHHhCc-CCCEEE
Confidence 7 8888999999999 999999987766543 2223354444444 4555679999999999987 899999
Q ss_pred Ec-ccc-cccccc---HHHHHHHHhh------cCCEEEehhhhhhhccccCCCCCC--CCCCeEEEEcCCCcc--cCCCc
Q 010058 231 AG-ASA-YARLYD---YARIRKVCDK------QKAVMLADMAHISGLVAAGVIPSP--FEYADVVTTTTHKSL--RGPRG 295 (519)
Q Consensus 231 ~~-~sn-~g~~~d---~~~i~~ia~~------~~~~livD~ah~~g~~~~~~~~~p--~~~~di~~~S~~K~l--~Gprg 295 (519)
++ ++| +|...+ +++|.++|++ ||+++|+|++|..........+.. ....++++.|+||++ +|+|.
T Consensus 178 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 257 (398)
T 3ele_A 178 INSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERI 257 (398)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCC
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCcccee
Confidence 87 666 787777 6677788998 999999999976532211111111 114578999999987 57788
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
|+++++++..... .+...+..........+++.....++..+++. .. ..+++.++++++.+.|++.
T Consensus 258 G~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~---~~~~~~~~~~~l~~~L~~~ 323 (398)
T 3ele_A 258 GYVLVPDEVYDKA--------ELYAAVCGAGRALGYVCAPSLFQKMIVKCQGA---TG---DINAYKENRDLLYEGLTRI 323 (398)
T ss_dssp EEEECCTTSTTHH--------HHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTC---CC---CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcchhhhHH--------HHHHHHHHHhhhccccCCCHHHHHHHHHHhcC---HH---HHHHHHHHHHHHHHHHHHc
Confidence 9999988531000 11221111111111123333333333333321 11 3677888999999999998
Q ss_pred CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 376 GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
|+.++.+. .+.++++.+.. .+..++.+.|.++||.++ ||... ..++++||++. ++ +++++++++.|
T Consensus 324 g~~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~----~g~~~-~~~~~iRis~~--~~----~e~i~~~l~~l 389 (398)
T 3ele_A 324 GYHCFKPD-GAFYMFVKALE--DDSNAFCEKAKEEDVLIV----AADGF-GCPGWVRISYC--VD----REMIKHSMPAF 389 (398)
T ss_dssp TCCEECCS-BSSEEEEECSS--SCHHHHHHHHHTTTEECE----ESGGG-TCTTEEEEECC--SC----HHHHHHHHHHH
T ss_pred CCeecCCC-eeEEEEEEcCC--CCHHHHHHHHHHCCEEEe----Ccccc-CCCCeEEEEec--CC----HHHHHHHHHHH
Confidence 98876643 34456666542 367788888989999997 44321 12578999985 45 89999999999
Q ss_pred HHHHHH
Q 010058 456 DAAVKL 461 (519)
Q Consensus 456 ~~~l~~ 461 (519)
.++++.
T Consensus 390 ~~~l~~ 395 (398)
T 3ele_A 390 EKIYKK 395 (398)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998864
No 68
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.95 E-value=4.5e-26 Score=236.87 Aligned_cols=364 Identities=11% Similarity=0.059 Sum_probs=242.2
Q ss_pred hhhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 010058 56 PLEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133 (519)
Q Consensus 56 ~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~ 133 (519)
++...++.++..+.+.. .+.+.|+|..+.+. +++.|.+++.+.+.... ++...|+...+..++++.+.+++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----~~~~~y~~~~g~~~l~~~la~~l~~ 92 (429)
T 1yiz_A 18 RYQGSTKSVWVEYIQLA-AQYKPLNLGQGFPDYHAPKYALNALAAAANSPD----PLANQYTRGFGHPRLVQALSKLYSQ 92 (429)
T ss_dssp SCCCCTTCHHHHHHHHH-HHHCCEECCSSSCSSCCCHHHHHHHHHHHTCSC----GGGGSCCCSSCCHHHHHHHHHHHHH
T ss_pred HhhhCCchHHHHHHHHh-ccCCEEEecCCCCCCCCCHHHHHHHHHHHhccc----cCccCCCCCCCcHHHHHHHHHHHHH
Confidence 34445555665555432 23467899877663 57899999998876410 0111233333456788777788888
Q ss_pred HcCCCCCCCcc-eEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC---
Q 010058 134 AFQLDPAKWGV-NVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES--- 208 (519)
Q Consensus 134 ~~g~~~~~~~~-~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~--- 208 (519)
.+|.+.+. . +|.+++|++ |+..++.++++|||+|++.++.|.++.. .+...|..+..+++ +++
T Consensus 93 ~~g~~~~~--~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~~--~~~~~~ 160 (429)
T 1yiz_A 93 LVDRTINP--MTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP--------MVKAAGGIPRFIPL--KPNKTG 160 (429)
T ss_dssp HHTSCCCT--TTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEEC--BCCCSS
T ss_pred HhCCCCCC--cCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEeC--Cccccc
Confidence 88853221 2 589999987 8888999999999999999977766543 12233444444543 433
Q ss_pred ------CCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccC----CCC
Q 010058 209 ------TGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAG----VIP 273 (519)
Q Consensus 209 ------~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~----~~~ 273 (519)
++.+|++++++++++ ++++|+++ ++| +|... ++++|+++|++||+++|+|++|........ +..
T Consensus 161 ~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~ 239 (429)
T 1yiz_A 161 GTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICT 239 (429)
T ss_dssp SSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGG
T ss_pred ccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhh
Confidence 467999999999975 88998887 656 78777 489999999999999999999864322111 100
Q ss_pred CC-CCCCeEEEEcCCCccc--CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHH--
Q 010058 274 SP-FEYADVVTTTTHKSLR--GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ-- 348 (519)
Q Consensus 274 ~p-~~~~di~~~S~~K~l~--GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~-- 348 (519)
.+ ..+.|+++.|+||+++ |.|.|++++++ ++.+.+...... ...+.+....+++..+++.
T Consensus 240 ~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~~ 304 (429)
T 1yiz_A 240 LPGMWERTITIGSAGKTFSLTGWKIGWAYGPE--------------ALLKNLQMVHQN-CVYTCATPIQEAIAVGFETEL 304 (429)
T ss_dssp STTTGGGEEEEEEHHHHHTCGGGCCEEEESCH--------------HHHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHH
T ss_pred ccCCcCceEEEecchhccCCCCcceEEEEeCH--------------HHHHHHHHHHhh-cccCCChHHHHHHHHHHhccc
Confidence 00 1257899999999874 66789999987 455544332111 1234455556666677776
Q ss_pred ---hc-CHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCC-----------CcHHHHHHhh-cccCe
Q 010058 349 ---VK-TPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKG-----------IDGSRVEKVL-ESVHI 412 (519)
Q Consensus 349 ---~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~-----------~~~~~~~~~L-~~~gI 412 (519)
.. ...+++.++++.++++.+.+.|.+.|+.++.+ ..+.++++++.... .+..++.+.| +++||
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv 383 (429)
T 1yiz_A 305 KRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVP-QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGL 383 (429)
T ss_dssp TTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEEC-SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSE
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCE
Confidence 32 33468888999999999999999989887654 23456777765321 3456677766 47999
Q ss_pred EEcccccCCCCC--CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 413 AANKNTVPGDVS--AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 413 ~v~~~~~p~~~~--~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.+......+... ....+++||+++ ++ +++++++++.|.+++
T Consensus 384 ~v~~g~~f~~~~~~~~~~~~iRis~~--~~----~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 384 QGIPPSAFYSEPNKHLGEDFVRYCFF--KK----DENLQKAAEILRKWK 426 (429)
T ss_dssp ECBCGGGGSCGGGGGGTTTEEEEECC--SC----HHHHHHHHHHHHHHS
T ss_pred EEeCchHhCCCcccCCCCCeEEEEec--CC----HHHHHHHHHHHHHhc
Confidence 997321111000 012578999987 35 799999999998875
No 69
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.95 E-value=2.7e-27 Score=243.06 Aligned_cols=335 Identities=15% Similarity=0.119 Sum_probs=223.8
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~ 156 (519)
+.++|..+.+.+++.+++++.+.+...+ |.+..+...+++ +.+++++|.+. .+.+++|+.|+.
T Consensus 23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~~--------~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~gt~al~ 85 (391)
T 3dr4_A 23 DLPRISVAAPRLDGNERDYVLECMDTTW--------ISSVGRFIVEFE----KAFADYCGVKH-----AIACNNGTTALH 85 (391)
T ss_dssp -----CCCCCCCCSSHHHHHHHHHHHTC--------CSSCSHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHH
T ss_pred CCceeccCCCCCCHHHHHHHHHHHHcCC--------ccCCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHH
Confidence 4466777777788999999998887622 111335566666 78888888873 477788877988
Q ss_pred HHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc
Q 010058 157 QVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA 235 (519)
Q Consensus 157 ~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn 235 (519)
.++.++ ++|||+|+++++.|.++.... ...|..+..+ +++++++.+|++++++++++ ++++|+++ +.
T Consensus 86 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~--------~~~g~~~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~v~~~-n~ 153 (391)
T 3dr4_A 86 LALVAMGIGPGDEVIVPSLTYIASANSV--------TYCGATPVLV--DNDPRTFNLDAAKLEALITP-RTKAIMPV-HL 153 (391)
T ss_dssp HHHHHHTCCTTCEEEEESSSCTHHHHHH--------HHTTCEEEEE--CBCTTTCSBCGGGSGGGCCT-TEEEECCB-CG
T ss_pred HHHHHcCCCCcCEEEECCCchHHHHHHH--------HHCCCEEEEE--ecCccccCcCHHHHHHhcCC-CceEEEEE-CC
Confidence 899999 999999999998887765422 2334444444 45656789999999998886 78888753 22
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchh
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVM 315 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~ 315 (519)
+|...|+++|.++|+++|+++|+|++|..|....+.....+.++++.++|.||+|+|++||+++++++
T Consensus 154 tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~------------ 221 (391)
T 3dr4_A 154 YGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDD------------ 221 (391)
T ss_dssp GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCH------------
T ss_pred CCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCH------------
Confidence 78899999999999999999999999998877655433222234444555789999888899988764
Q ss_pred hhHHHHhhhcccCC----------CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC--C
Q 010058 316 YAYEDKINQAVFPG----------LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG--G 383 (519)
Q Consensus 316 ~~~~~~i~~~~~~~----------~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~ 383 (519)
++.+.+......+ ..|... .+.++.+++.......+++..++.+++++++.+.|.+.|+.+... .
T Consensus 222 -~~~~~~~~~~~~g~~~~~~~~~~~~g~~~--~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 298 (391)
T 3dr4_A 222 -DLAAKMRLLRGQGMDPNRRYWFPIVGFNY--RMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHVA 298 (391)
T ss_dssp -HHHHHHHHHHBTTCCTTSTTCCSSCCCBC--BCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGGTTSEECCCCC
T ss_pred -HHHHHHHHHHhcCCCCCCccccccccccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCcCCC
Confidence 2332222111100 001000 111222222222234577888999999999999999888877654 1
Q ss_pred C----CcceeeeeccC-CCCcHHHHHHhhcccCeEEcccccCCCCCC---------------CCCCeEEeccCccccCCC
Q 010058 384 T----ENHLVLVNLRN-KGIDGSRVEKVLESVHIAANKNTVPGDVSA---------------MVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 384 ~----~~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~---------------~~~~~iRi~~~~~ttrg~ 443 (519)
. ..+++.+.+.. .+.+..++.+.|.+.||.++....|....+ .....||++++..+|
T Consensus 299 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t--- 375 (391)
T 3dr4_A 299 LTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLT--- 375 (391)
T ss_dssp TTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCC---
T ss_pred CCCcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCC---
Confidence 1 12233444332 256788899999999999985432222111 013579999988888
Q ss_pred CHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAV 459 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l 459 (519)
++|++++++.|++++
T Consensus 376 -~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 376 -EADIDRVIAALDQVL 390 (391)
T ss_dssp -HHHHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHHHHh
Confidence 999999999998653
No 70
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=6.8e-26 Score=232.47 Aligned_cols=338 Identities=14% Similarity=0.090 Sum_probs=229.8
Q ss_pred cCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHH-HHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 77 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM-AESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 77 ~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~-le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
+.|+|..+++ .+++.|.+++.+.+.+.. .+|+. . ..+ +++.+.+++.+.+|.+.+. .+|.+++|++
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~------~--~~~~lr~~la~~l~~~~g~~~~~--~~v~~t~g~~ 97 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHGV-FGYSR------W--KNDEFLAAIAHWFSTQHYTAIDS--QTVVYGPSVI 97 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTCC-CCCCC------S--CCHHHHHHHHHHHHHHSCCCCCG--GGEEEESCHH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCCC-CCCCC------C--ChHHHHHHHHHHHHHhcCCCCCH--HHEEEcCCHH
Confidence 4688876665 357899999998875421 13322 1 345 7777778888888843221 3699999988
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||+|++.++.|.++... +...|..+..++.+.+..++.+|++++++++++.++++|+++
T Consensus 98 ~al~~~~~~l~~~gd~vl~~~p~y~~~~~~--------~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~ 169 (390)
T 1d2f_A 98 YMVSELIRQWSETGEGVVIHTPAYDAFYKA--------IEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLC 169 (390)
T ss_dssp HHHHHHHHHSSCTTCEEEEEESCCHHHHHH--------HHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHHHHHH--------HHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEe
Confidence 88889999999999999999777665431 223354455555432211346899999999976578998877
Q ss_pred -ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC---CC-C-CeEEEEcCCCcc--cCCCcceEEe
Q 010058 233 -ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP---FE-Y-ADVVTTTTHKSL--RGPRGAMIFF 300 (519)
Q Consensus 233 -~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p---~~-~-~di~~~S~~K~l--~GprgG~i~~ 300 (519)
++| +|...+ +++|+++|+++|+++|+|++|..+... +....+ +. . .|. +.|+||++ +|.|.|++++
T Consensus 170 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~ 247 (390)
T 1d2f_A 170 SPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWG-EQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGII 247 (390)
T ss_dssp SSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCS-SSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEE
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEE
Confidence 666 787766 889999999999999999998754322 211111 11 2 277 89999987 5777899998
Q ss_pred ecccccccccCcchhhhHHHHhhhccc-CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh-c-CC
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVF-PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE-R-GY 377 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~-~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~ 377 (519)
+++ ++.+.+..... ....++++...++++.++++.. ...+++..+++.++++.+.+.|++ . |+
T Consensus 248 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 313 (390)
T 1d2f_A 248 ENS-------------SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPEL 313 (390)
T ss_dssp CSH-------------HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred CCH-------------HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 642 44444433222 1122456666666666677653 234678888999999999999998 5 77
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
.++.+ ..+.+.++.+...+.+..++.+.|. ++||.++. +.. ++..++.+||+++. + ++++++.++.|
T Consensus 314 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~----g~~f~~~~~~~~Ris~~~--~----~~~l~~~l~~l 382 (390)
T 1d2f_A 314 NWQIP-QSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMP----GYTYGEEGRGFVRLNAGC--P----RSKLEKGVAGL 382 (390)
T ss_dssp CCCCC-SBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEE----GGGGCGGGTTEEEEECCS--C----HHHHHHHHHHH
T ss_pred EEecC-CccEEEEEEccccCCCHHHHHHHHHHHcCEEeeC----ccccCCCCCCeEEEEecC--C----HHHHHHHHHHH
Confidence 66543 3344556776543356778888887 68999973 332 12235789999875 3 67899988888
Q ss_pred HHHHH
Q 010058 456 DAAVK 460 (519)
Q Consensus 456 ~~~l~ 460 (519)
.++++
T Consensus 383 ~~~l~ 387 (390)
T 1d2f_A 383 INAIR 387 (390)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88775
No 71
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.95 E-value=1.2e-25 Score=225.77 Aligned_cols=323 Identities=16% Similarity=0.160 Sum_probs=222.2
Q ss_pred HHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCc
Q 010058 66 DIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWG 143 (519)
Q Consensus 66 ~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~ 143 (519)
+.+..+....++.|+|..++|+ ++|.|++++.+.+.+.. +| + .....+++ +.+++++|++++
T Consensus 6 ~~~~~~~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~--~y------~-~~~~~~lr----~~la~~~~~~~~--- 69 (337)
T 3p1t_A 6 EAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARIN--RY------P-FDAEPRVM----RKLAEHFSCPED--- 69 (337)
T ss_dssp --------CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGTT--SC------C-TTHHHHHH----HHHHHHHTSCGG---
T ss_pred hhccccccCCCCceEeeCCCCCCCCCHHHHHHHHHhhhhhc--cC------C-CCchHHHH----HHHHHHhCcCHH---
Confidence 3344444556678999999886 58899999998776521 23 2 23445555 788888998774
Q ss_pred ceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhh
Q 010058 144 VNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAA 222 (519)
Q Consensus 144 ~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~ 222 (519)
+|.+++|++ ++..++.++ |||+|++.++.|.++.. .+...|..+..++ .+ +++.+|++++++.
T Consensus 70 -~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~-- 133 (337)
T 3p1t_A 70 -NLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA--------RIAVSGLRHFEIG--LT-DDLLLDPNDLAQV-- 133 (337)
T ss_dssp -GEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHH--------HHTTSCCEEEEEC--BC-TTSSBCHHHHTTC--
T ss_pred -HEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHH--------HHHHcCCEEEEec--CC-CCCCCCHHHHHhh--
Confidence 599999998 777666666 99999999977766543 2223455444444 44 3578999999875
Q ss_pred hhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcc--cCCCcceE
Q 010058 223 LFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL--RGPRGAMI 298 (519)
Q Consensus 223 ~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l--~GprgG~i 298 (519)
.++++|+++ ++| +|...|.+++.++|+++++ +++|++|.. +...+.........++++.|+||++ +|+|.|++
T Consensus 134 -~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~-~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~ 210 (337)
T 3p1t_A 134 -SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYVD-YSSFRARGLAYGENELVFRSFSKSYGLAGLRLGAL 210 (337)
T ss_dssp -CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGG-GSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEE
T ss_pred -cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCChh-hccccccccccCCCEEEEeeCchhccCcchheEEE
Confidence 268888888 666 8999999999999999997 566999753 2222211111225689999999987 57888999
Q ss_pred EeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCE
Q 010058 299 FFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYD 378 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 378 (519)
++++ ++.+.+..... .++++...++++..+++.. ..+++..+++.++++.+.+.|++.|+.
T Consensus 211 ~~~~--------------~~~~~l~~~~~---~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~ 271 (337)
T 3p1t_A 211 FGPS--------------ELIAAMKRKQW---FCNVGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYR 271 (337)
T ss_dssp ECCH--------------HHHHHHHTTSC---TTCSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EeCH--------------HHHHHHHhhcC---CCCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCcCE
Confidence 9987 55555544322 2355666666665555431 246777888888999999999999887
Q ss_pred EecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 379 LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+..+ ...++++... ++.++.+.|.++||.++....++ .++++|+++. + ++|+++++++|+++
T Consensus 272 ~~~~--~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRis~~---~----~~~~~~l~~al~~~ 333 (337)
T 3p1t_A 272 VASS--EANFVLVENA----AGERTLRFLRERGIQVKDAGQFG-----LHHHIRISIG---R----EEDNDRLLAALAEY 333 (337)
T ss_dssp BCCC--SSSEEEEECT----TTHHHHHHHHHTTEECEEGGGGT-----CCSEEEEECC---C----HHHHHHHHHHHHHH
T ss_pred ECCC--CCeEEEEEcC----CHHHHHHHHHHCCeEEEECccCC-----CCCeEEEecC---C----HHHHHHHHHHHHHH
Confidence 7553 2345555432 35678888989999997432221 2578999975 4 79999999999876
Q ss_pred HH
Q 010058 459 VK 460 (519)
Q Consensus 459 l~ 460 (519)
++
T Consensus 334 ~~ 335 (337)
T 3p1t_A 334 SD 335 (337)
T ss_dssp TC
T ss_pred hh
Confidence 53
No 72
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.95 E-value=2.1e-26 Score=238.66 Aligned_cols=367 Identities=11% Similarity=0.048 Sum_probs=247.3
Q ss_pred hhhhhhcCHHHHHHHHHHHHhcccCeeecCCCCC--CcHHHHHHHhhHhhhcc-CCCCCCCCCCCCchhHHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEKARQWKGLELIPSENF--TSVSVMQAVGSVMTNKY-SEGYPGARYYGGNEYIDMAESLCQKR 130 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~-~~g~p~~~~y~~~~~~~~le~~~~~~ 130 (519)
.+++..+++..+..+.... ...+.|+|..+++. +++.|.+++.+.+.... ..+| +...+..++++.+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y------~~~~g~~~lr~~la~~ 79 (422)
T 3fvs_A 7 ARRLDGIDYNPWVEFVKLA-SEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQY------TKTFGYPPLTKILASF 79 (422)
T ss_dssp CGGGTTCCCCHHHHHHHHH-HTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSC------CCTTCCHHHHHHHHHH
T ss_pred HHHhhccCccHHHHHHHHh-hcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCC------CCCCCCHHHHHHHHHH
Confidence 4455666666655554433 34577899887764 68999999999886521 1133 3333446777777788
Q ss_pred HHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeee----
Q 010058 131 ALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL---- 205 (519)
Q Consensus 131 ~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~---- 205 (519)
+.+.+|.+.+. ..+|++++|++ ++..++.++++|||+|++.++.|.++.. .+...|..+..+++..
T Consensus 80 ~~~~~g~~~~~-~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~ 150 (422)
T 3fvs_A 80 FGELLGQEIDP-LRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGGRPVFVSLKPGPIQ 150 (422)
T ss_dssp HHHHHTCCCCH-HHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECBCCCCC
T ss_pred HHHhhCCCCCC-CCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH--------HHHHcCCEEEEEeccccccc
Confidence 88888875321 01589999988 8888999999999999999987766543 1223354455555432
Q ss_pred C-----CCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 206 D-----ESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 206 d-----~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+ .+++.+|++++++++++ ++++|+++ ++| +|... ++++|+++|+++|+++|+|++|... ...+..+.+
T Consensus 151 ~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~ 228 (422)
T 3fvs_A 151 NGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWM-VYDGHQHIS 228 (422)
T ss_dssp SSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC-BCTTCCCCC
T ss_pred ccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhh-ccCCCCCCC
Confidence 0 12457999999999886 89999888 666 78777 6899999999999999999998642 222211111
Q ss_pred C------CCCeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHH
Q 010058 276 F------EYADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALK 347 (519)
Q Consensus 276 ~------~~~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~ 347 (519)
+ ...++++.|+||++ +|+|.|++++++ ++.+.+...... ...+++....+++..+++
T Consensus 229 ~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~ 293 (422)
T 3fvs_A 229 IASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD--------------HIMKHLRTVHQN-SVFHCPTQSQAAVAESFE 293 (422)
T ss_dssp GGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------------HHHHHHHHHHHT-TTCCCCHHHHHHHHHHHH
T ss_pred hhhcccccCcEEEEecchhccCCccceEEEEEeCH--------------HHHHHHHHHHhh-ccCCCCcHHHHHHHHHHh
Confidence 1 13458889999986 577889999987 455544332221 123445566666666776
Q ss_pred H------hcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCC--Cc----------HHHHHH-hhc
Q 010058 348 Q------VKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKG--ID----------GSRVEK-VLE 408 (519)
Q Consensus 348 ~------~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~--~~----------~~~~~~-~L~ 408 (519)
. .....+++..+++.++++.+.+.|++.|+.++.+. .+.+.++++...+ .+ ..++.. +|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 372 (422)
T 3fvs_A 294 REQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQ-GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIK 372 (422)
T ss_dssp HHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCS-BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHH
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCC-eeeEEEEechhhcccccccccccccccHHHHHHHHHH
Confidence 4 12335688899999999999999999999877653 3556677664311 11 334444 567
Q ss_pred ccCeEEcccccCCCC--CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 409 SVHIAANKNTVPGDV--SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 409 ~~gI~v~~~~~p~~~--~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++||.+......+.. .+...+.+||++.. + +++++++++.|.++++
T Consensus 373 ~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~----~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 373 NKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK--D----EATLQAMDEKLRKWKV 420 (422)
T ss_dssp HHCEECEEGGGGSCHHHHTTSCSEEEEECCC--C----HHHHHHHHHHHHHHHH
T ss_pred hcCEEEeCcHHhcCCcCCCCCCCeEEEEecC--C----HHHHHHHHHHHHHHHh
Confidence 789999732211110 12356899999764 5 8999999999998875
No 73
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.95 E-value=1.6e-27 Score=250.56 Aligned_cols=351 Identities=13% Similarity=0.116 Sum_probs=236.1
Q ss_pred CeeecCC-CCCCcHHHHHHHhhHhhhccC----CCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPS-ENFTSVSVMQAVGSVMTNKYS----EGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~-en~~~~~V~ea~~~~l~~~~~----~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.+.|..+ -.+.|+.|.+++.+.+.. |. .++.. .+.+. ..+.+.+++++++++|++++ +|++++|+
T Consensus 68 ~iyld~~~~g~~p~~v~~~i~~~l~~-~~~~~~~~~~~--~~~~~---~~~~~~l~~~la~~~g~~~~----~v~~t~g~ 137 (465)
T 3e9k_A 68 AIYFLGNSLGLQPKMVKTYLEEELDK-WAKIAAYGHEV--GKRPW---ITGDESIVGLMKDIVGANEK----EIALMNAL 137 (465)
T ss_dssp CEECBTTTSCCEETTHHHHHHHHHHH-HHHHGGGGGTS--SSSCG---GGTTHHHHGGGHHHHTCCGG----GEEECSCH
T ss_pred eEEecCCccCCChHHHHHHHHHHHHH-HHhhCCccccc--CCccH---HHhHHHHHHHHHHHcCCCcC----CEEEECCH
Confidence 3555422 234567777777766532 21 11111 01111 12223456899999999874 59999998
Q ss_pred H-HHHHHHHhhcCCCCE---EEEecCCCcccccccccccCCceeeeeeeeEE--EeeeeCCCCCCCCHHHHHHHhhhh--
Q 010058 153 P-ANFQVYTALLKPHER---IMALDLPHGGHLSHGYQTDTKKISAVSIFFET--MPYRLDESTGYIDYEQLEKSAALF-- 224 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~---Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~--v~~~~d~~~~~iD~d~l~~~i~~~-- 224 (519)
+ ++..++.++++|||+ |++.++.|.+....... .+...|..+.. +.+...++++.+|+++|++++.++
T Consensus 138 t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~----~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~ 213 (465)
T 3e9k_A 138 TVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIES----QLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGD 213 (465)
T ss_dssp HHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHH----HHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHH----HHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCC
Confidence 8 777788899877665 99999888765432211 01112222110 111112246789999999999732
Q ss_pred CCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCccc-CCCc-ceEEe
Q 010058 225 RPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLR-GPRG-AMIFF 300 (519)
Q Consensus 225 k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~-Gprg-G~i~~ 300 (519)
++++|+++ ++| +|...|+++|.++|+++|+++++|++|..|....++... ++|++++|+||++. ||.+ |++++
T Consensus 214 ~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~---~~D~~~~s~~K~l~~gp~~~g~l~~ 290 (465)
T 3e9k_A 214 SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDW---GVDFACWCSYKYLNAGAGGIAGAFI 290 (465)
T ss_dssp GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH---TCCEEEECSSSTTCCCTTCCCEEEE
T ss_pred CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhc---CCCEEEECcccccccCCCceEEEEE
Confidence 78899888 666 899999999999999999999999999988776554433 68999999999994 7876 99999
Q ss_pred eccc--cccc-ccC---cch--hhhHHHHhh--hcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Q 010058 301 RKGV--KEIN-KQG---QEV--MYAYEDKIN--QAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 301 ~~~~--~~~~-~~g---~~~--~~~~~~~i~--~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~ 370 (519)
+++. .+.+ ..| +.. .+.+..... ........|+++...++++.++++.+...++++.+++..++++++.+
T Consensus 291 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~ 370 (465)
T 3e9k_A 291 HEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEY 370 (465)
T ss_dssp CGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 8764 2333 222 210 000000000 00001123789999999999999987766689999999999999999
Q ss_pred HHHh-----------cCCEEecCCC---CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc-
Q 010058 371 SLLE-----------RGYDLVSGGT---ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT- 435 (519)
Q Consensus 371 ~L~~-----------~g~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~- 435 (519)
.|++ .|++++.+.. ...++++.+. .+..++.+.|.+.||.++. ..++.||+++
T Consensus 371 ~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~---~~~~~l~~~L~~~Gi~v~~---------~~~~~iRis~~ 438 (465)
T 3e9k_A 371 LIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS---VPNKDVFQELEKRGVVCDK---------RNPNGIRVAPV 438 (465)
T ss_dssp HHHHHCC---------CEEECSCSSGGGBCSCEEEEEC---CTTCCHHHHHHTTTEECEE---------ETTTEEEEBCC
T ss_pred HHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec---CCHHHHHHHHHHCCEEEec---------CCCCEEEEeCc
Confidence 9988 5788876531 1334455543 2456788888889999861 1247899998
Q ss_pred CccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+.+++ ++|++++++.|+++++.
T Consensus 439 ~~~~t----~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 439 PLYNS----FHDVYKFTNLLTSILDS 460 (465)
T ss_dssp TTTCC----HHHHHHHHHHHHHHHTC
T ss_pred ccCCC----HHHHHHHHHHHHHHHHh
Confidence 78888 99999999999998863
No 74
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.95 E-value=1.5e-25 Score=234.73 Aligned_cols=364 Identities=12% Similarity=0.012 Sum_probs=241.0
Q ss_pred HHHHHHHHHHHHhccc-CeeecCCC-CCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCC
Q 010058 62 PEIADIIELEKARQWK-GLELIPSE-NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDP 139 (519)
Q Consensus 62 ~~~~~~~~~e~~~~~~-~i~L~a~e-n~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~ 139 (519)
.++++.+.+....... .+++-..- .+.++.+.+++.+.+.... .. |.......++++.+++++++++|++.
T Consensus 26 ~~v~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~e~~~~a~~~~~--~~-----~~~~~~~~~l~~~~~~~la~l~g~~~ 98 (452)
T 2dgk_A 26 DVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNW--ID-----KEEYPQSAAIDLRCVNMVADLWHAPA 98 (452)
T ss_dssp HHHHHHHHHHGGGSCCCTTBCSCCSCCCCCHHHHHHHHHTTTCBT--TC-----TTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhcCCCCCccCCCCeeCCCchHHHHHHHHHHhccCC--CC-----hhhChhHHHHHHHHHHHHHHHhCCCc
Confidence 4667777665422211 12221111 3457889999887775421 11 22336678899999999999999976
Q ss_pred CC--CcceEEeCCcHH-HHHHHHHhhcC--------CC-----CEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 140 AK--WGVNVQSLSGSP-ANFQVYTALLK--------PH-----ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 140 ~~--~~~~V~~~sGs~-a~~~~~~all~--------pG-----D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
+. + ..+.+++|++ |+..++.++.+ +| |+|++++ .|.++.. .+...|..++.++
T Consensus 99 ~~~~~-~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~--------~~~~~G~~v~~v~- 167 (452)
T 2dgk_A 99 PKNGQ-AVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHK--------FARYWDVELREIP- 167 (452)
T ss_dssp CTTSC-CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHH--------HHHHTTCEEEECC-
T ss_pred ccccC-CceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHH--------HHHHcCceEEEEe-
Confidence 42 1 1377777777 88888877754 56 5888877 6654432 2233455555554
Q ss_pred eeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhc------CCEEEehhhhhhhccc--cCCCC
Q 010058 204 RLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQ------KAVMLADMAHISGLVA--AGVIP 273 (519)
Q Consensus 204 ~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~------~~~livD~ah~~g~~~--~~~~~ 273 (519)
++++++.+|+++|++++++ +|++|+++ ++| +|...|+++|.++|+++ |+++++|+||..+..+ .+..+
T Consensus 168 -~~~~~~~~d~~~l~~~i~~-~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~ 245 (452)
T 2dgk_A 168 -MRPGQLFMDPKRMIEACDE-NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV 245 (452)
T ss_dssp -CBTTBCSCCHHHHHHHCCT-TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC
T ss_pred -cCCCCCeECHHHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch
Confidence 4434689999999999987 89998888 666 89999999999999995 9999999998765431 11111
Q ss_pred C--CCCCCeEEEEcCCCcccC-CCcceEEeecccccccccCcchhhhHHHHhh--hcc------cCCCCCCccHHHHHHH
Q 010058 274 S--PFEYADVVTTTTHKSLRG-PRGAMIFFRKGVKEINKQGQEVMYAYEDKIN--QAV------FPGLQGGPHNHTISGL 342 (519)
Q Consensus 274 ~--p~~~~di~~~S~~K~l~G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~--~~~------~~~~~g~~~~~~iaal 342 (519)
. ...++|++++++||++.+ ++.|+++++++... .+.+. ... .....++.......++
T Consensus 246 ~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 313 (452)
T 2dgk_A 246 WDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEAL------------PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQ 313 (452)
T ss_dssp CSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGS------------CGGGCEEECCTTCCEEECCSCCSCBCHHHHHH
T ss_pred hhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHH------------HHHhccCccccCCCCCCcccCCCChhHHHHHH
Confidence 1 133799999999998755 45599999764110 01110 000 0112234444345555
Q ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCC---CCcceeeeeccCC---CCcHHHHHHhhcccCeEEc
Q 010058 343 AVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGG---TENHLVLVNLRNK---GIDGSRVEKVLESVHIAAN 415 (519)
Q Consensus 343 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~---~~~~~~~v~~~~~---~~~~~~~~~~L~~~gI~v~ 415 (519)
.+++..+...++++..++..++++++.+.|++. |++++.++ ...+++.+.+... .++..++.+.|.+.||.++
T Consensus 314 ~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~ 393 (452)
T 2dgk_A 314 YYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVP 393 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCC
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeee
Confidence 666666555678899999999999999999998 58887542 2234444444321 1455788899988999765
Q ss_pred ccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHh
Q 010058 416 KNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLAL 463 (519)
Q Consensus 416 ~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~ 463 (519)
....|... ...+.+|+++...+| ++|++++++.|++++....
T Consensus 394 ~~~~~~~~--~~~~~lRis~~~~~t----~e~id~li~~l~~~~~~~~ 435 (452)
T 2dgk_A 394 AFTLGGEA--TDIVVMRIMCRRGFE----MDFAELLLEDYKASLKYLS 435 (452)
T ss_dssp EEECSTTC--TTCEEEEEECCTTCC----HHHHHHHHHHHHHHHHHHH
T ss_pred eeeCCccc--CCeEEEEEEecCCCC----HHHHHHHHHHHHHHHHHHH
Confidence 33233221 124589999988888 8999999999999887543
No 75
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.95 E-value=4.5e-26 Score=232.41 Aligned_cols=333 Identities=15% Similarity=0.142 Sum_probs=228.9
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
++.|+|..+++. +++.|.+++.+.+.+.. .+|+. .+ .++++.+.+++.+.+|.+.+. .+|++++|++
T Consensus 23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~-------~~-~~lr~~la~~~~~~~~~~~~~--~~i~~t~g~~ 91 (377)
T 3fdb_A 23 QGVLPLWVAESDFSTCPAVLQAITDAVQREA-FGYQP-------DG-SLLSQATAEFYADRYGYQARP--EWIFPIPDVV 91 (377)
T ss_dssp TTSEECCSSCCCSCCCHHHHHHHHHHHHTTC-CSSCC-------SS-CCHHHHHHHHHHHHHCCCCCG--GGEEEESCHH
T ss_pred CCeeeecccCCCCCCCHHHHHHHHHHHHcCC-CCCCC-------CC-HHHHHHHHHHHHHHhCCCCCH--HHEEEeCChH
Confidence 467899888774 58999999999887521 13332 22 456766667887777754322 3688898887
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|||+|++.++.|.++.. .+...|..+..++ .+++ +|++++++++++ ++++|+++
T Consensus 92 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~---~d~~~l~~~l~~-~~~~v~i~ 157 (377)
T 3fdb_A 92 RGLYIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQREGIFID--ATGG---INLHDVEKGFQA-GARSILLC 157 (377)
T ss_dssp HHHHHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTCCEEEEE--CTTS---CCHHHHHHHHHT-TCCEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEEcc--CCCC---CCHHHHHHHhcc-CCCEEEEe
Confidence 8888999999999999999987776543 2223354444544 4432 999999999987 78888888
Q ss_pred -ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccC-CCCCCCC-----CCeEEEEcCCCcc--cCCCcceEE
Q 010058 233 -ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAG-VIPSPFE-----YADVVTTTTHKSL--RGPRGAMIF 299 (519)
Q Consensus 233 -~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~-~~~~p~~-----~~di~~~S~~K~l--~GprgG~i~ 299 (519)
++| +|...+ +++|+++|+++|+++|+|++|..... .+ ....++. ..++++.|+||++ +|.|.|+++
T Consensus 158 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~-~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 236 (377)
T 3fdb_A 158 NPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVF-DGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQII 236 (377)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBS-SSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhc-CCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEE
Confidence 666 777664 66777789999999999999875332 22 1111221 2348899999987 567789887
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CC
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER--GY 377 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~ 377 (519)
+.++ ++.+.+..... ...++++...++++..+++.. ...+++..+++.++++++.+.|++. |+
T Consensus 237 ~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 301 (377)
T 3fdb_A 237 FSNP-------------SDAEHWQQLSP-VIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGA 301 (377)
T ss_dssp CCSH-------------HHHHHHHHSCH-HHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTC
T ss_pred eCCH-------------HHHHHHHHHHH-hhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 7442 45554443211 112355666666666677653 2346888899999999999999995 88
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
.++.+ ..+.+.++++...+.+.+.+..+++++||.++ ||.. +...++.+||++.. + ++++++.++.|.
T Consensus 302 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~~~~~~~~~Ris~~~--~----~e~i~~~l~~l~ 370 (377)
T 3fdb_A 302 KITPM-QATYLMWIDFRDTTIEGSPSEFFIEKAKVAMN----DGAWFGEDGTGFCRLNFAT--S----REVLEEAIDRMA 370 (377)
T ss_dssp EECCC-SBCSEEEEECTTSCCCSCHHHHHHHHHCEECE----EGGGGCGGGTTEEEEECCS--C----HHHHHHHHHHHH
T ss_pred eEecC-CeeEEEEEECcccCCCHHHHHHHHHhCCEEec----CChhccCCCCCEEEEEeCC--C----HHHHHHHHHHHH
Confidence 88654 33455567776544443344555566799997 4432 22246789999773 4 799999999999
Q ss_pred HHHH
Q 010058 457 AAVK 460 (519)
Q Consensus 457 ~~l~ 460 (519)
++++
T Consensus 371 ~~l~ 374 (377)
T 3fdb_A 371 KAVS 374 (377)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8875
No 76
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.95 E-value=5.5e-26 Score=233.45 Aligned_cols=355 Identities=12% Similarity=0.038 Sum_probs=240.9
Q ss_pred hhhhhcCHHHHHHHHHHHHh-----cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHH
Q 010058 55 APLEEIDPEIADIIELEKAR-----QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 127 (519)
Q Consensus 55 ~~l~~~~~~~~~~~~~e~~~-----~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~ 127 (519)
+.++.+.+..+..+.+...+ .++.|+|..+++. +++.|.+++.+.+.... +|+. ..+..++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~------~~g~~~lr~~l 75 (396)
T 3jtx_A 4 TLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHELE--KYPL------TAGLPELRQAC 75 (396)
T ss_dssp HHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGG--SCCC------TTCCHHHHHHH
T ss_pred hhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhcc--CCCC------CCCcHHHHHHH
Confidence 34455566655555544333 2456899888774 57899999998875422 3433 23346788888
Q ss_pred HHHHHHHcCCC---CCCCcceEEeCCcHH-HHHHHHHhhcCCC-----CEEEEecCCCcccccccccccCCceeeeeeee
Q 010058 128 QKRALDAFQLD---PAKWGVNVQSLSGSP-ANFQVYTALLKPH-----ERIMALDLPHGGHLSHGYQTDTKKISAVSIFF 198 (519)
Q Consensus 128 ~~~~~~~~g~~---~~~~~~~V~~~sGs~-a~~~~~~all~pG-----D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 198 (519)
.+++.+.+|.+ ++. +|++++|++ ++..++.++++|| |+|++.++.|.++.. .+...|..+
T Consensus 76 a~~l~~~~g~~~~~~~~---~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~--------~~~~~g~~~ 144 (396)
T 3jtx_A 76 ANWLKRRYDGLTVDADN---EILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG--------ATLLGGGEI 144 (396)
T ss_dssp HHHHHHHTTTCCCCTTT---SEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH--------HHHHTTCEE
T ss_pred HHHHHHhcCCCCCCCCC---eEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH--------HHHHcCCEE
Confidence 89998888964 531 599999988 8888999999997 799999977765543 122335555
Q ss_pred EEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHH---HHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 199 ETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYA---RIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 199 ~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~---~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
..+++ +.+++.+|++++++++.+ ++++|+++ ++| +|...+.+ +|.++|++||+++|+|++|..... .+..+
T Consensus 145 ~~v~~--~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-~~~~~ 220 (396)
T 3jtx_A 145 HFANC--PAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYF-DGNKP 220 (396)
T ss_dssp EEEEC--CTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCS-TTCCC
T ss_pred EEeec--CCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccccccc-CCCCC
Confidence 55554 555678999999999987 89999987 666 78777654 588999999999999999764322 22111
Q ss_pred CCC----------CCCeEEEEcCCCc--ccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHH
Q 010058 274 SPF----------EYADVVTTTTHKS--LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISG 341 (519)
Q Consensus 274 ~p~----------~~~di~~~S~~K~--l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaa 341 (519)
.+. ...++++.|++|+ ++|.|.|++++++ ++.+.+...... ..++++...+++
T Consensus 221 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~~a 285 (396)
T 3jtx_A 221 LGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDA--------------ELLKNFLLYRTY-HGSAMSIPVQRA 285 (396)
T ss_dssp CCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECH--------------HHHHHHHHHHHH-HTCCCCHHHHHH
T ss_pred chHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCH--------------HHHHHHHHHHhh-cccCCCHHHHHH
Confidence 110 2567899999996 4678889998877 444444332111 113456666666
Q ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccC
Q 010058 342 LAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVP 420 (519)
Q Consensus 342 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p 420 (519)
+..+++. ...+++.++++.++++.+.+.|.+. +.+..+ ..+.+.++.+.. .+..++.+.| +++||.+......
T Consensus 286 ~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~ 359 (396)
T 3jtx_A 286 SIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV-FDVKLP-DASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFL 359 (396)
T ss_dssp HHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT-SCCCCC-SSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc-CCccCC-CeeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHh
Confidence 6667764 4556888899999999999999886 333333 335566777643 4566777666 6689999743222
Q ss_pred CCC---CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 421 GDV---SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 421 ~~~---~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+.. .+...+++||++.. + +++++++++.|.+++
T Consensus 360 ~~~~~~~~~~~~~iRis~~~--~----~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 360 ARDTEQGNPGEGYVRIALVA--D----VATCVKAAEDIVSLY 395 (396)
T ss_dssp CCCCTTCCTTTTEEEEECCS--C----HHHHHHHHHHHHHHC
T ss_pred CCcccccCCCCCeEEEEEcC--C----HHHHHHHHHHHHHHh
Confidence 210 12346899999764 4 799999999998764
No 77
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.95 E-value=1.1e-26 Score=235.89 Aligned_cols=340 Identities=11% Similarity=0.097 Sum_probs=225.7
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCC--CCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcce-EEeCCcHH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYP--GARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVN-VQSLSGSP 153 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p--~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~-V~~~sGs~ 153 (519)
..+.+.+++.++|+.|++++.+.+.+....|.. ...++ + ....++.+.+++++++++|++.+. + +++++|++
T Consensus 4 ~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~la~~~g~~~~~---~~i~~t~g~t 78 (362)
T 2c0r_A 4 RAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHR-G-AVYEAVHNEAQARLLALLGNPTGY---KVLFIQGGAS 78 (362)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTT-S-HHHHHHHHHHHHHHHHHTTCCSSE---EEEEESSHHH
T ss_pred ceeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCC-c-HHHHHHHHHHHHHHHHHhCCCCCc---EEEEECCCch
Confidence 356788898899999999999987652211111 01111 1 233456667889999999997531 3 57778877
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
++..++.++++|||+|++++..+.++. ... .+...| .++.++++.+. .+..+|.++++ +++ +||+|++
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~----~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-~t~~v~~ 148 (362)
T 2c0r_A 79 TQFAMIPMNFLKEGQTANYVMTGSWASK--ALK----EAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-NAAYLHL 148 (362)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSHHHHH--HHH----HHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-TEEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEecCcHhHH--HHH----HHHHhC-CeEEEecccccccccCCCHHHcc--cCC-CcCEEEE
Confidence 888899999999999998765433321 100 122335 55666543211 12345766654 555 8999888
Q ss_pred c-ccc-cccc-ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--
Q 010058 232 G-ASA-YARL-YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK-- 305 (519)
Q Consensus 232 ~-~sn-~g~~-~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~-- 305 (519)
+ ++| +|.. .|+++| +|+++++|++|..|..+.++ ...|++++|+||++ ||.| |+++++++..
T Consensus 149 ~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~-----~~~d~~~~s~~K~~-g~~G~G~l~~~~~~~~~ 216 (362)
T 2c0r_A 149 TSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDL-----NQFGLVYAGAQKNL-GPSGVTVVIVREDLVAE 216 (362)
T ss_dssp ESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCG-----GGCSEEEEETTTTT-CCSSCEEEEEEGGGSSS
T ss_pred eCCcCccceeccccccc------CCCEEEEEChhhccCCccch-----hHCcEEEEeccccc-cCcCcEEEEEcHHHHhh
Confidence 8 555 7874 566665 89999999999877554322 23499999999998 5777 9999988531
Q ss_pred cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcC-C-EEecC
Q 010058 306 EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERG-Y-DLVSG 382 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~ 382 (519)
+.+... ..+++..... .....++++...++++.+|++.+... ++++..++++++++++.+.|++.| + .+..+
T Consensus 217 l~~~~~--~~~~~~~~~~---~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 291 (362)
T 2c0r_A 217 SPKHLP--TMLRYDTYVK---NNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVD 291 (362)
T ss_dssp CCTTSC--GGGCHHHHHH---TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSC
T ss_pred ccccCc--hHHhHHHHhh---ccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Confidence 111000 0001110000 11223678888888989999876544 578899999999999999999987 6 76542
Q ss_pred CC--CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 383 GT--ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 383 ~~--~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.. ....+++.+. .+.+..++.+.|.+.||.+. |+... .++||+|+...++ ++|++++++.|+++++
T Consensus 292 ~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~gi~~~----~g~~~---~~~iRis~~~~~~----~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 292 VDSRSDMNITFRLA-SEELEKEFVKASEQEGFVGL----KGHRS---VGGLRASIYNAVP----YESCEALVQFMEHFKR 359 (362)
T ss_dssp GGGBCSSEEEEECS-CHHHHHHHHHHHHHTTEESC----BCCTT---TCSEEEECCTTSC----HHHHHHHHHHHHHHHH
T ss_pred hHHcCCcEEEEEcC-CcchHHHHHHHHHHCCCeec----cCCCC---CCEEEEECCCCCC----HHHHHHHHHHHHHHHH
Confidence 11 1233444432 13456778888999999774 44432 3579999988888 8999999999998875
No 78
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.95 E-value=2.3e-26 Score=236.68 Aligned_cols=333 Identities=16% Similarity=0.171 Sum_probs=229.3
Q ss_pred cCeeecCCCC--C-CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 77 KGLELIPSEN--F-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 77 ~~i~L~a~en--~-~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
+.|+|..+++ + +++.+.+++.+.+.+ +..++.+.++..| ...+.+.+++++++++|.+ ++.+++|++
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g---~~~~~~~l~~~la~~~g~~------~v~~~~ggt 113 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEK-YGTGCAGSRFLNG---TLDIHVELEEKLSAYVGKE------AAILFSTGF 113 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTC---CCHHHHHHHHHHHHHHTCS------EEEEESSHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHH-cCCCCCCcCcccC---CcHHHHHHHHHHHHHhCCC------cEEEECCHH
Confidence 4578877765 2 688999999988865 2223322221112 2344556668999999974 366666665
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh---CCcEE
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF---RPKLI 229 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~---k~klI 229 (519)
|+..++.++++|||+|++.++.|+++... +...|..+..++. +|++++++.+++. ++++|
T Consensus 114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~--------~~~~g~~~~~v~~--------~d~~~l~~~l~~~~~~~~~~v 177 (398)
T 3a2b_A 114 QSNLGPLSCLMGRNDYILLDERDHASIIDG--------SRLSFSKVIKYGH--------NNMEDLRAKLSRLPEDSAKLI 177 (398)
T ss_dssp HHHHHHHHHSSCTTCEEEEETTCCHHHHHH--------HHHSSSEEEEECT--------TCHHHHHHHHHTSCSSSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEECCccCHHHHHH--------HHHcCCceEEeCC--------CCHHHHHHHHHhhccCCceEE
Confidence 99889999999999999999888777542 2233544444331 5899999998864 68899
Q ss_pred EEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhcccc-CCC--C-CCCC-CCeEEEEcCCCcccCCCcceEEeec
Q 010058 230 VAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAA-GVI--P-SPFE-YADVVTTTTHKSLRGPRGAMIFFRK 302 (519)
Q Consensus 230 i~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~-~~~--~-~p~~-~~di~~~S~~K~l~GprgG~i~~~~ 302 (519)
+++ ++| +|...++++|.++|+++|+++|+|++|..+.... +.. . ..+. .+|++++|+||+++ |.||++++++
T Consensus 178 ~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~ 256 (398)
T 3a2b_A 178 CTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA 256 (398)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH
Confidence 888 555 7889999999999999999999999987664311 110 0 0011 36999999999986 6669999987
Q ss_pred ccccccccCcchhhhHHHHhhhccc-CCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEec
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVF-PGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~-~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 381 (519)
++.+.+..... ....++++..+.+++..+++.. ...++..+++.++++++.+.|++.|++++.
T Consensus 257 --------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 320 (398)
T 3a2b_A 257 --------------DVIDFLKHNARSVMFSASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDHGFDLGA 320 (398)
T ss_dssp --------------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHTTCCBCS
T ss_pred --------------HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhcCCCcCC
Confidence 45554433211 1112344555555555667653 234677889999999999999998887765
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+ ..+++++.+. .+.+..++.+.|.+.||.+.....++. +...+++||+++..++ ++|++++++.|.++++.
T Consensus 321 ~--~g~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRis~~~~~~----~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 321 T--ESPILPIFIR-SNEKTFWVTKMLQDDGVFVNPVVSPAV--PAEESLIRFSLMATHT----YDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp C--CSSEEEEECC-CHHHHHHHHHHHHHTTEECEEECTTTS--CGGGCEEEEECCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred C--CCCEEEEEcC-CHHHHHHHHHHHHHCCcEEEeeCCCCC--CCCCceEEEEEeCCCC----HHHHHHHHHHHHHHHHH
Confidence 3 2456666653 233566788888778999974322211 1235789999987777 89999999999998864
No 79
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=2.6e-26 Score=234.98 Aligned_cols=320 Identities=9% Similarity=0.032 Sum_probs=210.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceEEeC-CcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee--
Q 010058 120 IDMAESLCQKRALDAFQLDPAKWGVNVQSL-SGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI-- 196 (519)
Q Consensus 120 ~~~le~~~~~~~~~~~g~~~~~~~~~V~~~-sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~-- 196 (519)
..++.+.+++++++++|++. .|.++ ||+.|+.+++ .+++|||+|++++..|.++.. .. .....|.
T Consensus 33 ~~~~~~~~~~~l~~~~~~~~-----~v~~~~sgt~a~~~~~-~~~~~gd~vi~~~~~~~~~~~-~~-----~~~~~g~~~ 100 (379)
T 3ke3_A 33 FQEVMNDLLSNLKTVYNAEA-----AVIIPGSGTYGMEAVA-RQLTIDEDCLIIRNGWFSYRW-TQ-----ILEKGKFAK 100 (379)
T ss_dssp HHHHHHHHHHHHHHHHTCSE-----EEEEESCHHHHHHHHH-HHHCTTCEEEEEECSHHHHHH-HH-----HHHHHCCSS
T ss_pred HHHHHHHHHHHHHHHhCCCC-----EEEEcCChhHHHHHHH-HhCCCCCeEEEEeCCchhHHH-HH-----HHHHhCCCC
Confidence 34566677899999999873 36666 4555887665 456899999998865544311 00 0111122
Q ss_pred eeEEEeeeeCC-----CC-CCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhh
Q 010058 197 FFETMPYRLDE-----ST-GYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 197 ~~~~v~~~~d~-----~~-~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g 265 (519)
.+..++.+.+. .. +.+|++++++++.+.+|++|++. .+| +|...| +++|+++|+++|+++++|++|. |
T Consensus 101 ~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g 179 (379)
T 3ke3_A 101 SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G 179 (379)
T ss_dssp EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T
T ss_pred ceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C
Confidence 23344432210 01 25899999999975589998887 344 788888 9999999999999999999987 6
Q ss_pred ccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--cccccCcchhhhH------HHHhhhcccCCCCCCccH
Q 010058 266 LVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQGQEVMYAY------EDKINQAVFPGLQGGPHN 336 (519)
Q Consensus 266 ~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~~g~~~~~~~------~~~i~~~~~~~~~g~~~~ 336 (519)
....++... ++|++++|+||+|.||.| |+++++++.. +.+.......+++ ........ ....++++.
T Consensus 180 ~~~~~~~~~---~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~t~~~ 255 (379)
T 3ke3_A 180 CVWLDMKEL---GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGG-HAYHATMPT 255 (379)
T ss_dssp TCCCCHHHH---TCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTS-CCCSSCCCH
T ss_pred Ccccccccc---CCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccC-CCCCCCCCH
Confidence 443322222 689999999999998877 8999887531 1110000110111 01110110 112358899
Q ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCC-cceeeeeccCCCCcHHHHHHhhcccCeEEc
Q 010058 337 HTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTE-NHLVLVNLRNKGIDGSRVEKVLESVHIAAN 415 (519)
Q Consensus 337 ~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~ 415 (519)
..++++.++++.+.+.+++++.++..++++++.+.|+++|+.++.+... ...+. .+...+ ......+.|.++||.+.
T Consensus 256 ~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~-~~~~~~-~~~~~~~~L~~~Gi~v~ 333 (379)
T 3ke3_A 256 DSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVV-VSYTER-DDMHKGSAFAEAGLQIA 333 (379)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEE-EEECSC-HHHHSSHHHHHTTCCCE
T ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEE-EEccCC-cchHHHHHHHHCCeEEe
Confidence 9999999999988776788999999999999999999999888764321 12111 122212 11122567788999986
Q ss_pred ccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 416 KNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 416 ~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
...-|....+...+.||++++.+++ ++|++++++.|+++++..
T Consensus 334 ~g~~~~~~~~~~~~~lRis~~~~~t----~~di~~~~~~l~~~l~~~ 376 (379)
T 3ke3_A 334 AGVPLKVGEPDNFKTFRLGLFGLDK----LTDIDGTVERFEKALDEV 376 (379)
T ss_dssp ECCCCSSCCCTTCCEEEEECCSHHH----HTCHHHHHHHHHHHHHHH
T ss_pred CCccccccccCcCCEEEEeCCcCCC----HHHHHHHHHHHHHHHHHh
Confidence 3221111113346789999998888 899999999999988643
No 80
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=234.15 Aligned_cols=336 Identities=13% Similarity=0.076 Sum_probs=231.3
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCC---CCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCcHH-HHHH
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGAR---YYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS-LSGSP-ANFQ 157 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~---~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~-~sGs~-a~~~ 157 (519)
++..++|++|++++...+.+.+ +++.+. +..+ ....++-+.+++.+++++|++.+. +|++ ++|++ ++.+
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~--~n~~s~~~~~hr~-~~~~~~~~~ar~~la~ll~~~~~~---evif~t~~~T~a~n~ 92 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYK--GVGISVLEMSHRS-SDFAKIINNTENLVRELLAVPDNY---KVIFLQGGGCGQFSA 92 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGG--GSSSCTTTCCTTS-HHHHHHHHHHHHHHHHHHTCCTTE---EEEEESSHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhcc--cCCccccccCCCC-HHHHHHHHHHHHHHHHHhCCCCCC---eEEEEcCchHHHHHH
Confidence 4566789999999999987755 333221 2223 334455568889999999996432 4777 56666 8887
Q ss_pred HHHhhcCC--CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-cc
Q 010058 158 VYTALLKP--HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-AS 234 (519)
Q Consensus 158 ~~~all~p--GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~s 234 (519)
++.+++.+ ||+|++....+.++ ++.... .-.|.....+ +.+ .++.+++++++..+.+ +|++|.++ .+
T Consensus 93 a~~~l~~~~~Gd~v~~~~~g~~~~--~~~~~a----~~~G~~~~~~--~~~-~~~~~~~~~~~~~i~~-~t~lV~~~h~e 162 (377)
T 3e77_A 93 VPLNLIGLKAGRCADYVVTGAWSA--KAAEEA----KKFGTINIVH--PKL-GSYTKIPDPSTWNLNP-DASYVYYCANE 162 (377)
T ss_dssp HHHHHGGGSTTCEEEECCCSHHHH--HHHHHH----TTTSEEEECS--CCC-SSSCSCCCGGGCCCCT-TCSCEEEESEE
T ss_pred HHHhccCCCCCCeEEEEECCHHHH--HHHHHH----HHhCCceEEe--ccC-CCcCCCCChHHhccCC-CccEEEEeCcc
Confidence 88888865 99998776544443 222111 1123333333 333 2345667777666665 89998887 33
Q ss_pred c-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--ccccc
Q 010058 235 A-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--EINKQ 310 (519)
Q Consensus 235 n-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~~~~~ 310 (519)
+ +|...|+ +|+++|+++++|++|..|..+.++... +++++|.||++ ||.| |+++++++.. ..|..
T Consensus 163 t~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~-----~~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~~~~ 231 (377)
T 3e77_A 163 TVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKF-----GVIFAGAQKNV-GSAGVTVVIVRDDLLGFALREC 231 (377)
T ss_dssp TTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGC-----SEEEEEGGGTT-SCTTCEEEEEETTSCSCCCTTS
T ss_pred CchheEchh-----hhccCCCEEEEEcccccCCCCCchhhc-----CEEEEeccccc-CCCccEEEEEcHHHHhhccCCC
Confidence 3 7998888 588999999999999999988877654 57899999999 7998 9999998652 22211
Q ss_pred CcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcce
Q 010058 311 GQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHL 388 (519)
Q Consensus 311 g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 388 (519)
.. ..++..... .....+||+...+.++..|++++.+. +++.+.++..++++++.+.|.++ |+.+.......+.
T Consensus 232 p~--~~~~~~~~~---~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs 306 (377)
T 3e77_A 232 PS--VLEYKVQAG---NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRS 306 (377)
T ss_dssp CG--GGCHHHHHT---TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBC
T ss_pred Cc--hhhHHHHhh---cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcC
Confidence 11 112221111 12245899999999999999998877 79999999999999999999998 8875332222222
Q ss_pred -eeeeccCCCCcH-----HHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 389 -VLVNLRNKGIDG-----SRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 389 -~~v~~~~~~~~~-----~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.++.+..+++++ ..+.+.|.++||.+. +|.. ..+++|+|+..++| ++|+++++++|+++++.
T Consensus 307 ~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~----~g~~---~~g~iRiS~~~~~t----~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 307 KMNIPFRIGNAKGDDALEKRFLDKALELNMLSL----KGHR---SVGGIRASLYNAVT----IEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp SSEEEEEESSTTCCHHHHHHHHHHHHHTTEESC----BCCT---TTCSEEEECCTTSC----HHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEe----CCCC---cCCEEEEECCCCCC----HHHHHHHHHHHHHHHHH
Confidence 234444344432 245566667899985 4443 23569999999988 99999999999998763
No 81
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.94 E-value=2e-26 Score=237.83 Aligned_cols=360 Identities=13% Similarity=0.067 Sum_probs=237.8
Q ss_pred hhhhhhcCHHHHHHHHHHHHh--cccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHH
Q 010058 54 NAPLEEIDPEIADIIELEKAR--QWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 129 (519)
Q Consensus 54 ~~~l~~~~~~~~~~~~~e~~~--~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~ 129 (519)
++++..+.++.+..+.....+ ..+.|+|..+++. +++.|.+++.+.+.+....+|+. ..+..++++.+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~ 96 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGA------FHGKEAFKQAIVD 96 (404)
T ss_dssp CHHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCC------TTCCHHHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHH
Confidence 334444444444333332221 2346899888775 47899999988874321113332 2334678877778
Q ss_pred HHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC
Q 010058 130 RALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES 208 (519)
Q Consensus 130 ~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~ 208 (519)
++++.+|++.+.. .+|.+++|++ ++..++.++++|||+|++.++.|.++... +...|..+..++ .+++
T Consensus 97 ~~~~~~g~~~~~~-~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~v~--~~~~ 165 (404)
T 2o1b_A 97 FYQRQYNVTLDKE-DEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAG--------VLLADGKPVPLN--LEPP 165 (404)
T ss_dssp HHHHHHCCCCCTT-TSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHH--------HHHTTCEEEEEE--CCTT
T ss_pred HHHHHhCCCCCCc-ccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHH--------HHHCCCEEEEec--cCcc
Confidence 8888789752100 1589999987 88889999999999999999877665432 223344444444 4444
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CCC---C
Q 010058 209 TGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PFE---Y 278 (519)
Q Consensus 209 ~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~~---~ 278 (519)
++.+|++++++++++ ++++|+++ ++| +|...+ +++|.++|+++|+++|+|++|..+.. .+...+ .+. +
T Consensus 166 ~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~-~g~~~~~~~~~~~~~ 243 (404)
T 2o1b_A 166 HYLPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGF-DAKNPSILASENGKD 243 (404)
T ss_dssp TCCCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBS-SSCCCCGGGSTTHHH
T ss_pred cCcCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhccc-CCCCCChhhcCCCCC
Confidence 567899999998875 78999988 666 787764 78899999999999999999875432 121111 111 3
Q ss_pred CeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 279 ADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 279 ~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
.++++.|+||++ +|+|.|++++++ ++.+.+....... .++++....+++..+++.. ...+++
T Consensus 244 ~~i~~~s~sK~~g~~G~r~G~~~~~~--------------~~~~~l~~~~~~~-~~~~~~~~~~a~~~~l~~~-~~~~~~ 307 (404)
T 2o1b_A 244 VAIEIYSLSKGYNMSGFRVGFAVGNK--------------DMIQALKKYQTHT-NAGMFGALQDAAIYALNHY-DDFLEE 307 (404)
T ss_dssp HEEEEEESTTTTTCGGGCCEEEEECH--------------HHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHC-HHHHHH
T ss_pred CEEEEEecchhccCchhheEeEecCH--------------HHHHHHHHHHhhc-cCCCCHHHHHHHHHHHhcC-HHHHHH
Confidence 578999999998 577889999877 4544443321111 1344555666666667653 334688
Q ss_pred HHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCC-CCCCCCeEEec
Q 010058 357 YQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDV-SAMVPGGIRMG 434 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~-~~~~~~~iRi~ 434 (519)
.++++.++++.+.+.|++.|+.++.+ ..+.++++.+. .+.+..++.+.|. ++||.++ |+.. +....+++||+
T Consensus 308 ~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~----~g~~f~~~~~~~iRis 381 (404)
T 2o1b_A 308 QSNVFKTRRDRFEAMLAKADLPFVHA-KGGIYVWLETP-PGYDSEQFEQFLVQEKSILVA----PGKPFGENGNRYVRIS 381 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEECC-CBSSEEEEECC-TTCCHHHHHHHHHHHHCEECE----ESGGGCGGGTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCeecCC-CcceEEEEeCC-CCCCHHHHHHHHHHHCCEEEe----CchhhCcCCCCeEEEE
Confidence 88899999999999999988877654 23445667664 3456677777664 6899997 3332 11235789999
Q ss_pred cCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 435 TPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 435 ~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+.. + +++++++++.|.++++
T Consensus 382 ~~~--~----~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 382 LAL--D----DQKLDEAAIRLTELAY 401 (404)
T ss_dssp CCS--C----TTHHHHHHHHHHGGGG
T ss_pred EcC--C----HHHHHHHHHHHHHHHH
Confidence 874 4 6799999988887664
No 82
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5e-26 Score=241.29 Aligned_cols=329 Identities=15% Similarity=0.129 Sum_probs=236.6
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcC---
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLK--- 164 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~--- 164 (519)
++.+.+++.+.+.. +...++. .|.......++++.+++++++++|++.+. .++.+++|++ |+..++.++.+
T Consensus 77 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~~~~la~~~g~~~~~--~~~~~~~ggt~a~~~a~~a~~~~~~ 151 (497)
T 3mc6_A 77 GDDLIHLQTIAYEK-YCVANQL--HPDVFPAVRKMESEVVSMVLRMFNAPSDT--GCGTTTSGGTESLLLACLSAKMYAL 151 (497)
T ss_dssp CHHHHHHHHHHHHH-TSSCBTT--CTTTCHHHHHHHHHHHHHHHHHTTCCTTT--CCEEEESSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH-HhhcCCC--CcccChHHHHHHHHHHHHHHHHhCCCCCC--CeEEEcCcHHHHHHHHHHHHHHHHH
Confidence 57788888777665 2212222 23445677889999999999999998211 2477777776 88888888865
Q ss_pred --CC---CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-cc
Q 010058 165 --PH---ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YA 237 (519)
Q Consensus 165 --pG---D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g 237 (519)
+| |+|+++...|.++.. .+...|..+..++ ++++++.+|+++|++++++ +|++|+++ ++| +|
T Consensus 152 ~~~g~~~~~Vi~~~~~h~~~~~--------~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG 220 (497)
T 3mc6_A 152 HHRGITEPEIIAPVTAHAGFDK--------AAYYFGMKLRHVE--LDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHG 220 (497)
T ss_dssp HHSCCSSCEEEEETTSCHHHHH--------HHHHSCCEEEEEC--BCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTC
T ss_pred hcCCCCCceEEEeCCccHHHHH--------HHHHcCCeEEEEe--cCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCC
Confidence 56 999999977766543 3334566666665 4444688999999999987 89999988 555 89
Q ss_pred ccccHHHHHHHHhhcCCEEEehhhhhhhccc----cCC--C-CC--CCCCCeEEEEcCCCcccCCCc-ceEEeecccccc
Q 010058 238 RLYDYARIRKVCDKQKAVMLADMAHISGLVA----AGV--I-PS--PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI 307 (519)
Q Consensus 238 ~~~d~~~i~~ia~~~~~~livD~ah~~g~~~----~~~--~-~~--p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~ 307 (519)
...|+++|+++|+++|+++|+|++|..+... .+. . +. ...++|++++++||++.||.+ |+++++++
T Consensus 221 ~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~---- 296 (497)
T 3mc6_A 221 IADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNS---- 296 (497)
T ss_dssp CCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSH----
T ss_pred cCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCH----
Confidence 9999999999999999999999998865443 111 1 11 112689999999999866655 99998874
Q ss_pred cccCcchhhhHHHHhhhc----------ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--
Q 010058 308 NKQGQEVMYAYEDKINQA----------VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-- 375 (519)
Q Consensus 308 ~~~g~~~~~~~~~~i~~~----------~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 375 (519)
........ ..+...|+.....++++.+++..+...+++++.++..++++++.+.|.+.
T Consensus 297 ----------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 366 (497)
T 3mc6_A 297 ----------DLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIP 366 (497)
T ss_dssp ----------HHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred ----------HHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11111110 01222355566667888888888777788999999999999999999994
Q ss_pred CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 376 GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 376 g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
|+.++.+.. ..++.+ ...+.+..++.+.|.+.||.++... .+.++|+++. .++ ++|++++++.|
T Consensus 367 g~~~~~~~~-~~~v~~--~~~~~~~~~l~~~L~~~Gi~v~~~~--------~~~~~ri~~~-~~t----~e~i~~~~~~L 430 (497)
T 3mc6_A 367 DLDIMGNPR-YSVISF--SSKTLNIHELSDRLSKKGWHFNALQ--------KPVALHMAFT-RLS----AHVVDEICDIL 430 (497)
T ss_dssp TCEECSCCC-SSEEEE--ECTTTTHHHHHHHHHTTTCBCEECC--------SSCCEEEECC-TTT----TCTHHHHHHHH
T ss_pred CEEEecCCC-eeEEEE--eCCCCCHHHHHHHHHhCCEEEecCC--------CCCeEEEEEe-CCC----HHHHHHHHHHH
Confidence 898875432 223333 3445678899999999999886321 1346899877 455 79999999999
Q ss_pred HHHHHHHh
Q 010058 456 DAAVKLAL 463 (519)
Q Consensus 456 ~~~l~~~~ 463 (519)
.+++....
T Consensus 431 ~~~l~~~~ 438 (497)
T 3mc6_A 431 RTTVQELK 438 (497)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99997654
No 83
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.94 E-value=3.5e-25 Score=228.41 Aligned_cols=339 Identities=15% Similarity=0.077 Sum_probs=227.6
Q ss_pred cCeeecCCCC----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 77 KGLELIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
+.|+|..+.+ ++++.+.+++.+.+.+.. .... |+......++++.+.+++.+.+|++.+. .+|++++|+
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~----~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~--~~v~~t~g~ 107 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEP----KSVM-YTPANGIPELREELAAFLKKYDHLEVSP--ENIVITIGG 107 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCG----GGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG--GGEEEESHH
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcc----cccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc--ceEEEecCH
Confidence 5688865543 256889999988876521 0111 3443456778877777877777853221 369999998
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhh----h-hCC
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAA----L-FRP 226 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~----~-~k~ 226 (519)
+ |+..++.++++|||+|++.++.|.++.. .+...|..+..++. +++ + +|+++++++++ + .++
T Consensus 108 t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~~--~~~-~-~d~~~l~~~l~~~~~~~~~~ 175 (407)
T 2zc0_A 108 TGALDLLGRVLIDPGDVVITENPSYINTLL--------AFEQLGAKIEGVPV--DND-G-MRVDLLEEKIKELKAKGQKV 175 (407)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTTCEEEEEEE--ETT-E-ECHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEccc--CCC-C-CCHHHHHHHHHhhhcccCCc
Confidence 7 8988999999999999999977766533 12233544545543 432 3 89999999987 4 268
Q ss_pred cEEE-Ec-ccc-ccccccHH---HHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C--CCeEEEEcCCCccc-CCC
Q 010058 227 KLIV-AG-ASA-YARLYDYA---RIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E--YADVVTTTTHKSLR-GPR 294 (519)
Q Consensus 227 klIi-~~-~sn-~g~~~d~~---~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~--~~di~~~S~~K~l~-Gpr 294 (519)
++|+ ++ ++| +|...|.+ +|.++|+++|+++|+|++|..+... +....++ . +.++++.|+||+++ |.|
T Consensus 176 ~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r 254 (407)
T 2zc0_A 176 KLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYE-GGDIVPLKALDNEGRVIVAGTLSKVLGTGFR 254 (407)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSS-CSSCCCGGGGCSSCCEEEEEESTTTTCTTSC
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccC-CCCCCChhhcCCCCCEEEEcccccccCCCcc
Confidence 8875 44 556 78888776 8999999999999999998754332 1111111 1 34578889999986 457
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc-C-HhHHHHHHHHHHHHHHHHHHH
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK-T-PEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~-~-~~~~~~~~~~~~~~~~l~~~L 372 (519)
+|++++++ ++.+.+.....+...++ +.....++..+++... . ..+++..+++.++++++.+.|
T Consensus 255 ~G~~~~~~--------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 319 (407)
T 2zc0_A 255 IGWIIAEG--------------EILKKVLMQKQPIDFCA-PAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKAL 319 (407)
T ss_dssp CEEEECCH--------------HHHHHHHHHHTTTTSSS-CHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHH
T ss_pred eEEEecCH--------------HHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999986 55555544333322223 3444444555555321 1 234667788889999999999
Q ss_pred Hhc--CCEEecCCCCcceeeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCC-C--CCCCCeEEeccCccccCCCCHH
Q 010058 373 LER--GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDV-S--AMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 373 ~~~--g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~-~--~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
++. |+.++.+ ....++++.+.. +.+..++.+.|.+. ||.+. |+.. . ....+++||+++.. + ++
T Consensus 320 ~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~----~g~~~~~~~~~~~~iRis~~~~-~----~~ 388 (407)
T 2zc0_A 320 ENHLPNAEFTKP-IAGMFVMFFLPE-GADGISFANELMEREGVVVV----PGKPFYTDESGKNAIRLNFSRP-S----KE 388 (407)
T ss_dssp HHHCTTSCBCCC-SBSSEEEEECST-TCCHHHHHHHHHHHTCEECB----CSGGGCSSSCCTTEEEEECSSS-C----TT
T ss_pred HHhCCCCEEecC-CCcEEEEEEcCC-CCCHHHHHHHHHHhCCeEEE----CchhccCCCCCCCeEEEEeCCC-C----HH
Confidence 885 6766543 234566676643 56778888888776 99997 3332 1 12357899998766 5 79
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVKL 461 (519)
Q Consensus 447 di~~l~~~l~~~l~~ 461 (519)
|++++++.|.++++.
T Consensus 389 ~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 389 EIPIGIKKLAKLYKE 403 (407)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998864
No 84
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.94 E-value=6.7e-26 Score=232.34 Aligned_cols=322 Identities=12% Similarity=0.099 Sum_probs=220.9
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-cCCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL-LKPH 166 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al-l~pG 166 (519)
+++.+++++.+.+.... + . |.......+++ +.+++++|.+. .|.++||+.|+..++.++ ++||
T Consensus 15 ~~~~~~~a~~~~l~~~~---~---~-~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~g 78 (388)
T 1b9h_A 15 YDDAERNGLVRALEQGQ---W---W-RMGGDEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPG 78 (388)
T ss_dssp CCHHHHHHHHHHHHTSC---C---B-TTTCSHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHHHHcCC---e---e-ecCCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCc
Confidence 45899999999887521 1 1 22234555666 88888999863 599999977988899999 9999
Q ss_pred CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-ccccccHHHH
Q 010058 167 ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YARLYDYARI 245 (519)
Q Consensus 167 D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~~d~~~i 245 (519)
|+|++++++|.++... +...|..+.. ++++++++.+|++++++++++ ++++|+ ++| +|...|+++|
T Consensus 79 d~Vi~~~~~~~~~~~~--------~~~~g~~~~~--v~~~~~~~~~d~~~l~~~i~~-~~~~v~--~~n~tG~~~~l~~i 145 (388)
T 1b9h_A 79 TEVIVPAFTFISSSQA--------AQRLGAVTVP--VDVDAATYNLDPEAVAAAVTP-RTKVIM--PVHMAGLMADMDAL 145 (388)
T ss_dssp CEEEEESSSCTHHHHH--------HHHTTCEEEE--ECBCTTTCCBCHHHHHHHCCT-TEEEEC--CBCGGGCCCCHHHH
T ss_pred CEEEECCCccHHHHHH--------HHHcCCEEEE--EecCCCcCCCCHHHHHHhcCc-CceEEE--EeCCccCcCCHHHH
Confidence 9999999888776542 2233444444 445655688999999999976 788877 555 8999999999
Q ss_pred HHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhH--HHHhh
Q 010058 246 RKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAY--EDKIN 323 (519)
Q Consensus 246 ~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~--~~~i~ 323 (519)
.++|+++|++||+|++|..|....+.....++.+++.++|.||+++|+++|+++++++ .+ .+.+.
T Consensus 146 ~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~-------------~~~~~~~~~ 212 (388)
T 1b9h_A 146 AKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG-------------ETEKYETAF 212 (388)
T ss_dssp HHHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT-------------CHHHHHHHH
T ss_pred HHHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH-------------HHHHHHHHH
Confidence 9999999999999999988776533221112246777778889999999999999874 12 22221
Q ss_pred hcc----------cC-CCCCC---ccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCC-----
Q 010058 324 QAV----------FP-GLQGG---PHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGG----- 383 (519)
Q Consensus 324 ~~~----------~~-~~~g~---~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----- 383 (519)
... +. ...|+ ++....+++..++ ..+++..++++++++++.+.|+++ |+.+..+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 287 (388)
T 1b9h_A 213 LRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQL-----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADR 287 (388)
T ss_dssp HHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCB
T ss_pred HHHhCCCCccCccceeecccccCCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCc
Confidence 110 00 01122 3333333322222 235677888899999999999988 88776531
Q ss_pred CCcceeeeeccCCC-CcHHHHHHhhcccCeEEcccccCCCCCC------------------C------CCCeEEeccCcc
Q 010058 384 TENHLVLVNLRNKG-IDGSRVEKVLESVHIAANKNTVPGDVSA------------------M------VPGGIRMGTPAL 438 (519)
Q Consensus 384 ~~~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~------------------~------~~~~iRi~~~~~ 438 (519)
...+++++.+...+ .+..++.+.|.+.||.++.++.|....+ . ..+.|||+++..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~ 367 (388)
T 1b9h_A 288 NSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVL 367 (388)
T ss_dssp CCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGG
T ss_pred cceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCC
Confidence 22356666654211 2466788888889999986543321100 0 023599998887
Q ss_pred c-cCCCCHHHHHHHHHHHHHHHH
Q 010058 439 T-SRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 439 t-trg~~~~di~~l~~~l~~~l~ 460 (519)
+ | ++|++++++.|+++++
T Consensus 368 ~~t----~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 368 LAG----EPELHATAEIIADAVA 386 (388)
T ss_dssp GSC----HHHHHHHHHHHHHHHH
T ss_pred CCC----HHHHHHHHHHHHHHHh
Confidence 7 7 8999999999998875
No 85
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.94 E-value=1e-25 Score=234.24 Aligned_cols=339 Identities=15% Similarity=0.087 Sum_probs=229.5
Q ss_pred cCeeecCCCC------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-----CCCCCCcce
Q 010058 77 KGLELIPSEN------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ-----LDPAKWGVN 145 (519)
Q Consensus 77 ~~i~L~a~en------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g-----~~~~~~~~~ 145 (519)
+.|+|..+.. ++++.|++++.+.+......+| +...+..+++ +.++++++ ++++ +
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr----~~la~~~~~~~~~~~~~----~ 120 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGY------APSIGFLSSR----EEIASYYHCPEAPLEAK----D 120 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSC------CCTTCCHHHH----HHHHHHHCBTTBCCCGG----G
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCC------CCCCCcHHHH----HHHHHHHhhcCCCCChH----H
Confidence 4588876653 5789999999998876322233 2223445666 55666666 4443 5
Q ss_pred EEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh
Q 010058 146 VQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 146 V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~ 224 (519)
|++++|++ |+..++.++++|||+|+++++.|.++.. .+...|..+..+++.. .+++.+|++++++.+++
T Consensus 121 v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~- 190 (427)
T 3dyd_A 121 VILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT--------LAESMGIEVKLYNLLP-EKSWEIDLKQLEYLIDE- 190 (427)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEEEG-GGTTEECHHHHHSSCCT-
T ss_pred EEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEeccc-ccCCCCCHHHHHHHhcc-
Confidence 88888877 8888999999999999999977766543 2233455555555532 24578999999999887
Q ss_pred CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC----C-CeEEEEcCCCc--ccC
Q 010058 225 RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE----Y-ADVVTTTTHKS--LRG 292 (519)
Q Consensus 225 k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~----~-~di~~~S~~K~--l~G 292 (519)
++++|+++ ++| +|...+ +++|+++|+++|+++|+|++|.... ..+....++. . ..+++.|+||+ +.|
T Consensus 191 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~-~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G 269 (427)
T 3dyd_A 191 KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMV-FSDCKYEPLATLSTDVPILSCGGLAKRWLVPG 269 (427)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCB-CSSCCCCCGGGGCSSCCEEEEEESTTTSSCGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhc-cCCCcCccHHHhCCCCcEEEEeeccccCCCcC
Confidence 78888887 766 888888 9999999999999999999976422 2221111111 1 23677899997 467
Q ss_pred CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 293 PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 293 prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
+|.|+++++++... ...++.+.+...... ..+++....+++..+++......+++..+++.++++.+.+.|
T Consensus 270 ~riG~~~~~~~~~~-------~~~~i~~~l~~~~~~--~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L 340 (427)
T 3dyd_A 270 WRLGWILIHDRRDI-------FGNEIRDGLVKLSQR--ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGAL 340 (427)
T ss_dssp GCCEEEEEECSTTS-------SHHHHHHHHHHHHHH--HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEecCcchh-------hHHHHHHHHHHHHhc--cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999863100 000233333221111 135566777777777775444556888999999999999999
Q ss_pred Hhc-CCEEecCCCCcceeeeeccC----CCCcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHH
Q 010058 373 LER-GYDLVSGGTENHLVLVNLRN----KGIDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 373 ~~~-g~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
++. |+.++.+. ...+.++.+.. .+.+..++.+.| ++.||.+. ||... ..++++||++. ++ ++
T Consensus 341 ~~~~g~~~~~p~-~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~----~g~~~-~~~~~iRis~~--~~----~e 408 (427)
T 3dyd_A 341 AAIPGLRPVRPS-GAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCL----PATCF-EYPNFIRVVIT--VP----EV 408 (427)
T ss_dssp HHSTTEEEECCS-BTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECE----EGGGG-TCTTEEEEESC--SC----HH
T ss_pred hcCCCceecCCC-eeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEE----CCccc-CCCCeEEEEEC--CC----HH
Confidence 998 88876542 34455655532 124556666655 68999997 33321 12578999975 45 79
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVKL 461 (519)
Q Consensus 447 di~~l~~~l~~~l~~ 461 (519)
+++++++.|.++++.
T Consensus 409 ~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 409 MMLEACSRIQEFCEQ 423 (427)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998864
No 86
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.94 E-value=6.3e-26 Score=234.54 Aligned_cols=340 Identities=15% Similarity=0.162 Sum_probs=226.5
Q ss_pred CeeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCC-CCC-CchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 78 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGAR-YYG-GNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 78 ~i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~-~y~-~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
.+.|..+.+ +.|+.|.+++.+.+.+.+ +++... +|. +. ......+++++++++|++++ +|.+++|++
T Consensus 29 ~~yld~~~~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~---~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~ 99 (416)
T 1qz9_A 29 VIYLDGNSLGARPVAALARAQAVIAEEW--GNGLIRSWNSAGW---RDLSERLGNRLATLIGARDG----EVVVTDTTSI 99 (416)
T ss_dssp CEECCTTTSCCCBTTHHHHHHHHHHTCC--CCCGGGHHHHTSG---GGHHHHHHHHHHTTTTCCTT----SEEECSCHHH
T ss_pred eEeecCCCcCCCcHHHHHHHHHHHHHHH--hccCccccchhhH---HHHHHHHHHHHHHHcCCCcc----cEEEeCChhH
Confidence 456654433 568899999999887644 333211 111 10 12223455899999999764 488888887
Q ss_pred HHHHHHHhhc------CCCCEEEE-ecCCCcccccccccccCCceeee--eeeeEEEeeeeCCCCCCCCHHHHHHHhhhh
Q 010058 154 ANFQVYTALL------KPHERIMA-LDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLDESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 154 a~~~~~~all------~pGD~Vl~-~~~~~~~~~~~~~~~~~~~v~~~--g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~ 224 (519)
++..++.+++ +|||+|++ ....|+++........ ... |..+..+++ ++++++++++
T Consensus 100 al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~----~~~~~g~~~~~v~~----------~~~l~~~i~~- 164 (416)
T 1qz9_A 100 NLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLA----DMLQQGYTLRLVDS----------PEELPQAIDQ- 164 (416)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHH----HHHCSSCEEEEESS----------GGGHHHHCST-
T ss_pred HHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHH----HHhcCCceEEEeCc----------HHHHHHHhCC-
Confidence 6666777776 99997554 4556665443221100 011 333333332 6788888876
Q ss_pred CCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcc-cCCCc-ceEEe
Q 010058 225 RPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL-RGPRG-AMIFF 300 (519)
Q Consensus 225 k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l-~Gprg-G~i~~ 300 (519)
++++|+++ ++| +|...|+++|.++|+++|+++|+|++|..|....++... ++|++++|+||++ +|+++ |++++
T Consensus 165 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~g~~~~g~l~~ 241 (416)
T 1qz9_A 165 DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQA---GADYAIGCTYKYLNGGPGSQAFVWV 241 (416)
T ss_dssp TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHH---TCSEEEECSSSTTCCCTTCCCEEEE
T ss_pred CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhc---CCCEEEecCcccCCCCCCCeEEEEE
Confidence 89999888 555 799999999999999999999999999876543222111 4799999999997 57888 99999
Q ss_pred ecccc--ccc-ccC---cchhhhHHHHhh--hcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 301 RKGVK--EIN-KQG---QEVMYAYEDKIN--QAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 301 ~~~~~--~~~-~~g---~~~~~~~~~~i~--~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
++++. +.+ ..| ....++....+. ........++++...++++.++++.+...++++..+++.++++++.+.|
T Consensus 242 ~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 321 (416)
T 1qz9_A 242 SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELV 321 (416)
T ss_dssp CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 88641 222 111 100000000000 0000112367888888888889988766678899999999999999999
Q ss_pred Hhc----CCEEecCCC---CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccC-ccccCCCC
Q 010058 373 LER----GYDLVSGGT---ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTP-ALTSRGFV 444 (519)
Q Consensus 373 ~~~----g~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~-~~ttrg~~ 444 (519)
.+. |+.++.+.. ..+++++.+. +..++.+.|.+.||.+.. ...+.+||+++ ..++
T Consensus 322 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~gi~~~~---------~~~~~lRis~~~~~~t---- 384 (416)
T 1qz9_A 322 EQRCAAHELTLVTPREHAKRGSHVSFEHP----EGYAVIQALIDRGVIGDY---------REPRIMRFGFTPLYTT---- 384 (416)
T ss_dssp HHHHTTSCCEECSCSSGGGBCSEEEEECT----THHHHHHHHHTTTEECEE---------ETTTEEEEECCTTTCC----
T ss_pred HhhccCCCeEEeCCCCHHHcCCEEEEecC----CHHHHHHHHHhCCcEecc---------CCCCeEEEeCcccCCC----
Confidence 987 888876521 2345555543 267788888889998741 12468999987 3667
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010058 445 EEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|.++++.
T Consensus 385 ~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 385 FTEVWDAVQILGEILDR 401 (416)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 89999999999998864
No 87
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.94 E-value=2.7e-25 Score=232.50 Aligned_cols=372 Identities=12% Similarity=0.012 Sum_probs=241.1
Q ss_pred CchhhhhhhhhhhcCHHHHHHHHHHHHhcccCeeecCCCC----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHH
Q 010058 47 APWINQLNAPLEEIDPEIADIIELEKARQWKGLELIPSEN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 122 (519)
Q Consensus 47 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~ 122 (519)
..|...++++.+...+.....+.... ...+.|+|..+.+ ++++.+.+++.+.+.+... ....|+...+..+
T Consensus 48 ~~~~~~~s~~~~~~~~s~~~~~~~~~-~~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~----~~~~Y~~~~g~~~ 122 (448)
T 3aow_A 48 GDVERFFSKKALEMRASEVRELLKLV-ETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYAD----KALQYGTTKGFTP 122 (448)
T ss_dssp SCGGGGCCHHHHHCCCCHHHHHHHHH-HTSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHH----HHHSCCCTTCCHH
T ss_pred cchHHHhhHHHhcCCCcHHHHHHHhc-cCCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhH----HHhCCCCCCCcHH
Confidence 34655565555555554443333322 2456788876543 2577899998887764100 0011233344567
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEE
Q 010058 123 AESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETM 201 (519)
Q Consensus 123 le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v 201 (519)
+++.+.+++.+.+|++ +. .+|++++|++ ++..++.++++|||+|++.++.|.++... +...|..+..+
T Consensus 123 lr~~ia~~~~~~~g~~-~~--~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~--------~~~~g~~~~~v 191 (448)
T 3aow_A 123 LRETLMKWLGKRYGIS-QD--NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQA--------FNFYEPQYIQI 191 (448)
T ss_dssp HHHHHHHHHHHHHCCC-TT--SEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH--------HHTTCCEEEEE
T ss_pred HHHHHHHHHHHhcCcC-Ch--hhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHH--------HHHcCCEEEEe
Confidence 8877777777777983 22 3699999988 88889999999999999999877665432 22335444455
Q ss_pred eeeeCCCCCCCCHHHHHHHhh----h-hCCcEEEE-c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccC
Q 010058 202 PYRLDESTGYIDYEQLEKSAA----L-FRPKLIVA-G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAG 270 (519)
Q Consensus 202 ~~~~d~~~~~iD~d~l~~~i~----~-~k~klIi~-~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~ 270 (519)
+ .+++ .+|+++|+++++ + .++++|++ + ++| +|...+ +++|.++|++||+++|+|++|..+.....
T Consensus 192 ~--~~~~--g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~ 267 (448)
T 3aow_A 192 P--LDDE--GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGN 267 (448)
T ss_dssp E--EETT--EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSC
T ss_pred c--cCCC--CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC
Confidence 4 4432 389999999987 4 37888754 4 556 787766 56889999999999999999865433211
Q ss_pred CCCCC--C--CCCeEEEEcCCCccc-CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHH
Q 010058 271 VIPSP--F--EYADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVA 345 (519)
Q Consensus 271 ~~~~p--~--~~~di~~~S~~K~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~a 345 (519)
..++. + .+.++++.|++|+++ |+|.|++++++ ++.+.+........ .+++....+++..+
T Consensus 268 ~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~--------------~l~~~l~~~~~~~~-~~~~~~~q~a~~~~ 332 (448)
T 3aow_A 268 PEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDP--------------GIIRKMEIAKQSTD-LCTNVFGQVVAWRY 332 (448)
T ss_dssp CCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECH--------------HHHHHHHHHHHHHH-SSCCHHHHHHHHHH
T ss_pred CCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCH--------------HHHHHHHHHHHHhc-CCCCHHHHHHHHHH
Confidence 11110 1 135788999999985 56779999987 45554433221111 12344455555556
Q ss_pred HHHhc-CHhHHHHHHHHHHHHHHHHHHHHhc---CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCC
Q 010058 346 LKQVK-TPEYKAYQEQVLSNSSKFARSLLER---GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPG 421 (519)
Q Consensus 346 l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~ 421 (519)
++... ...+++..+++.++++.+.+.|++. |+.++.+ ....++|+.+.. +.+..++.+.|.+.||.+......+
T Consensus 333 L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p-~~g~~~~v~~~~-~~~~~~l~~~l~~~gV~v~pg~~f~ 410 (448)
T 3aow_A 333 VDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKP-EGGMFIWVTLPD-GIDSKKMLERAIKKGVAYVPGEAFY 410 (448)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCC-SBSSEEEEECST-TCCHHHHHHHHHHTTEECEEGGGGS
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCC-CccEEEEEEcCC-CCCHHHHHHHHHHCCcEEEcchhhc
Confidence 65321 1235667778889999999999885 7877554 234566777643 5677788888877799997322111
Q ss_pred CCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 422 DVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 422 ~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
. ....++++||++... + +++++++++.|.++++.
T Consensus 411 ~-~~~~~~~iRls~~~~-~----~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 411 A-HRDVKNTMRLNFTYV-D----EDKIMEGIKRLAETIKE 444 (448)
T ss_dssp T-TCCCCSEEEEECSSS-C----THHHHHHHHHHHHHHHH
T ss_pred C-CCCCCCEEEEEeCCC-C----HHHHHHHHHHHHHHHHH
Confidence 1 112357899998764 4 69999999999998864
No 88
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.94 E-value=8.1e-26 Score=232.53 Aligned_cols=337 Identities=15% Similarity=0.053 Sum_probs=222.8
Q ss_pred cccCeeecCCCC----CCcHHHHHHHhhHhhhcc--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe
Q 010058 75 QWKGLELIPSEN----FTSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS 148 (519)
Q Consensus 75 ~~~~i~L~a~en----~~~~~V~ea~~~~l~~~~--~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~ 148 (519)
..+.|+|..+.. ++++.+.+++.+.+.... ..+|+. ..+..+++ +.+++++|++++ +|.+
T Consensus 31 ~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~------~~~~~~l~----~~la~~~g~~~~----~v~~ 96 (397)
T 2zyj_A 31 RPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSP------TEGYAPLR----AFVAEWIGVRPE----EVLI 96 (397)
T ss_dssp STTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCC------TTCCHHHH----HHHHHHHTSCGG----GEEE
T ss_pred CCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCC------CCCCHHHH----HHHHHHhCCChh----hEEE
Confidence 345688865542 257889999988776410 113322 22345565 666777787663 5999
Q ss_pred CCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCc
Q 010058 149 LSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPK 227 (519)
Q Consensus 149 ~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~k 227 (519)
++|++ ++..++.++++|||+|++.++.|.++... +...|..+..++. +++ + +|++++++++++.+++
T Consensus 97 ~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~~~--~~~-~-~d~~~l~~~l~~~~~~ 164 (397)
T 2zyj_A 97 TTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQA--------FRLQGPRFLTVPA--GEE-G-PDLDALEEVLKRERPR 164 (397)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHH--------HHTTCCEEEEEEE--ETT-E-ECHHHHHHHHHHCCCS
T ss_pred eccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH--------HHHcCCEEEecCc--CCC-C-CCHHHHHHHHhhcCCe
Confidence 99988 88889999999999999999777665431 2223544445543 432 3 8999999999865789
Q ss_pred EEE-Ec-ccc-ccccccH---HHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC--------CCeEEEEcCCCccc-C
Q 010058 228 LIV-AG-ASA-YARLYDY---ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE--------YADVVTTTTHKSLR-G 292 (519)
Q Consensus 228 lIi-~~-~sn-~g~~~d~---~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~--------~~di~~~S~~K~l~-G 292 (519)
+|+ ++ ++| +|...+. ++|.++|+++|+++|+|++|..+... +..+.++. ...+++.|+||+++ |
T Consensus 165 ~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G 243 (397)
T 2zyj_A 165 FLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFG-EARLPSLFELAREAGYPGVIYLGSFSKVLSPG 243 (397)
T ss_dssp CEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCS-SCCCCCHHHHHHHHTCCCEEEEEESTTTTCGG
T ss_pred EEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCC-CCCCCchhhhCcccCCCeEEEEeccccccccc
Confidence 874 44 556 7877764 58899999999999999998754321 11111111 12388899999986 4
Q ss_pred CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 293 PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 293 prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
.|.|++++++ ++.+.+.........++ +....+++..+++.......++..+++.++++.+.+.|
T Consensus 244 ~r~G~~~~~~--------------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 308 (397)
T 2zyj_A 244 LRVAFAVAHP--------------EALQKLVQAKQGADLHT-PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHAL 308 (397)
T ss_dssp GCCEEEECCH--------------HHHHHHHHHHHHHHSSC-CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEecCH--------------HHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999987 45544433221111233 44444444455543210245777888899999999999
Q ss_pred Hhc---CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHH
Q 010058 373 LER---GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFE 449 (519)
Q Consensus 373 ~~~---g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~ 449 (519)
++. |+.++.+. ...++++.+.. +.+..++.+.|.+.||.+......+. ....++++||+++.. + ++|++
T Consensus 309 ~~~~~~g~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~-~~~~~~~iRis~~~~-~----~~~i~ 380 (397)
T 2zyj_A 309 DREVPKEVRYTRPK-GGMFVWMELPK-GLSAEGLFRRALEENVAFVPGGPFFA-NGGGENTLRLSYATL-D----REGIA 380 (397)
T ss_dssp HHHSCTTSEECCCS-BSSEEEEECST-TCCHHHHHHHHHHTTEEEEESGGGCT-TSCCTTEEEEECSSS-C----HHHHH
T ss_pred HHHCCCCeEEccCC-ccEEEEEEcCC-CCCHHHHHHHHHHCCCEEechHHhcC-CCCCCCeEEEEcCCC-C----HHHHH
Confidence 886 78876542 34566777643 55678888888888999974221111 112457899998765 5 79999
Q ss_pred HHHHHHHHHHHH
Q 010058 450 KVAEFFDAAVKL 461 (519)
Q Consensus 450 ~l~~~l~~~l~~ 461 (519)
++++.|.++++.
T Consensus 381 ~~~~~l~~~l~~ 392 (397)
T 2zyj_A 381 EGVRRLGRALKG 392 (397)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988864
No 89
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.94 E-value=7.1e-26 Score=235.54 Aligned_cols=349 Identities=15% Similarity=0.164 Sum_probs=221.9
Q ss_pred cCeeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-H
Q 010058 77 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 77 ~~i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a 154 (519)
+.+.|..+.+ ++++.|++++.+.+.+.+ +||...| .......+....+++++++++|++++ +|++++|++ +
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a 90 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAW--GNPSSSY-VAGRKAKDIINTARASLAKMIGGKPQ----DIIFTSGGTES 90 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCC--SCTTCSS-HHHHHHHHHHHHHHHHHHHHHTCCGG----GEEEESCHHHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhc--CCCccCc-HHHHHHHHHHHHHHHHHHHHcCCCcC----eEEEeCChHHH
Confidence 4567765554 578999999999887644 6666433 21122344555677999999999764 588999977 8
Q ss_pred HHHHHHhhc--------CCCCEEEEecCCCcccc-------------cccccccCCceeeeeeeeEEEeeeeCCCCCCCC
Q 010058 155 NFQVYTALL--------KPHERIMALDLPHGGHL-------------SHGYQTDTKKISAVSIFFETMPYRLDESTGYID 213 (519)
Q Consensus 155 ~~~~~~all--------~pGD~Vl~~~~~~~~~~-------------~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD 213 (519)
+..++.+++ +|||+|+++++.+.++. .+... .....|..+..++ ++++++.+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~----~~~~~g~~v~~v~--~~~~~~~~d 164 (432)
T 3a9z_A 91 NNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEH----LVEDQVAEVTFVP--VSKVNGQVE 164 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHH----HHHTTSCEEEEEC--CCTTTSSCC
T ss_pred HHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHH----HHHhcCcEEEEEe--cCcccCCcC
Confidence 888888876 59998888876654321 00000 0011244444544 443357899
Q ss_pred HHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcC----------CEEEehhhhhhhccccCCCCCCCCCCeE
Q 010058 214 YEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQK----------AVMLADMAHISGLVAAGVIPSPFEYADV 281 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~----------~~livD~ah~~g~~~~~~~~~p~~~~di 281 (519)
+++|++++++ ++++|+++ ++| +|...|+++|.++|+++| +++|+|++|..|....++... ++|+
T Consensus 165 ~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~---~~d~ 240 (432)
T 3a9z_A 165 VEDILAAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDL---GVDF 240 (432)
T ss_dssp HHHHHHTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHH---CCSE
T ss_pred HHHHHHhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhc---CCCE
Confidence 9999999986 89999988 555 799999999999999999 999999999766432222111 5799
Q ss_pred EEEcCCCcccCCCcceEEeecccc---ccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 282 VTTTTHKSLRGPRGAMIFFRKGVK---EIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 282 ~~~S~~K~l~GprgG~i~~~~~~~---~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
+++|+||++ ||+.|+++++++.. ..+ ..|+.. . . .+ ..++++...++++.++++.+. .++++.
T Consensus 241 ~~~s~~K~~-g~~~G~~~~~~~~~~~~~~~~~~~~~~----~----~-~~--~~~~~~~~~~~a~~aal~~~~-~~~~~~ 307 (432)
T 3a9z_A 241 LTIVGHKFY-GPRIGALYVRGVGKLTPLYPMLFGGGQ----E----R-NF--RPGTENTPMIAGLGKAADLVS-ENCETY 307 (432)
T ss_dssp EEEEGGGTT-CCSCEEEEETTBTTTBCCCCSCCSSCG----G----G-GT--SCSCCCHHHHHHHHHHHHHHH-HHHHHH
T ss_pred EEEehhHhc-CCcceEEEEccccccCCcCceeecCCc----c----c-cc--cCCCcCHHHHHHHHHHHHHHH-hhHHHH
Confidence 999999976 78899999987531 111 111110 0 0 01 125677778888878887654 367888
Q ss_pred HHHHHHHHHHHHHHHHhc-CCEEe--cC--C--CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccc--cCCC------
Q 010058 358 QEQVLSNSSKFARSLLER-GYDLV--SG--G--TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNT--VPGD------ 422 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~-g~~~~--~~--~--~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~--~p~~------ 422 (519)
.+++.++++++.+.|+++ |+.+. .+ + .......+.+...+.++.++.+.|. +|.++.+. .++.
T Consensus 308 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~G~~~~~~~~~~~~~ 385 (432)
T 3a9z_A 308 EAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQ--TLLASVGASCHSDHEDRPSP 385 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCS--SEECBSSCGGGGGGTTSCCH
T ss_pred HHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhc--CeEEeccccccCCCCCCccH
Confidence 999999999999999985 76543 22 0 1112333334332335555655553 55554221 1110
Q ss_pred ----CCC---CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 423 ----VSA---MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 423 ----~~~---~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+. ...+.|||+++.+++ ++|++++++.|+++++.
T Consensus 386 ~l~~~g~~~~~~~~~iRis~~~~~t----~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 386 VLLSCGIPVDVARNAVRLSVGRSTT----RAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp HHHHTTCCHHHHTTEEEEECCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCccccCceEEEEcCCCCC----HHHHHHHHHHHHHHHHH
Confidence 000 013789999998888 89999999999998864
No 90
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.94 E-value=5.6e-26 Score=229.68 Aligned_cols=337 Identities=12% Similarity=0.096 Sum_probs=229.2
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCC---CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCcH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY---YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS-LSGS 152 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~---y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~-~sGs 152 (519)
+.+++.|+..++|++|++++...+.+.+ ++|.+-+ +.+.+ ..++-+.+++.+++++|++.+ .+|.+ |+|+
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~--~~~~s~~~~~hr~~~-~~~~~~~~r~~la~ll~~~~~---~~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQ--GRGYSIMEISHRTKV-FEEVHFGAQEKAKKLYELNDD---YEVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGG--GSSSCGGGSCSSSHH-HHHHHHHHHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcc--cCCceeeccCCCCHH-HHHHHHHHHHHHHHHhCCCCC---ceEEEEcCcH
Confidence 4578999999999999999999887644 3443321 22323 345556888999999999643 25777 8888
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCC-CCHHHHHHHhhhhCCcEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGY-IDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~-iD~d~l~~~i~~~k~klIi 230 (519)
+ ++.+++.+++ +||+++.....+-+| ++... ..-.|..+..++. +.++.. ++++. + +++ +|++|.
T Consensus 79 T~a~n~~~~~~~-~~~~~~~i~~~~~~~--~~~~~----a~~~G~~v~~~~~--~~~g~~~~~~~~-~--l~~-~t~lv~ 145 (361)
T 3m5u_A 79 SLQFAMIPMNLA-LNGVCEYANTGVWTK--KAIKE----AQILGVNVKTVAS--SEESNFDHIPRV-E--FSD-NADYAY 145 (361)
T ss_dssp HHHHHHHHHHHC-CSSCEEEEECSHHHH--HHHHH----HHHTTCCEEEEEE--CTTTTSCSCCCC-C--CCT-TSSEEE
T ss_pred HHHHHHHHHhcC-CCCeEEEEeCCHHHH--HHHHH----HHHcCCceEEEec--ccCcCCCcCChh-h--cCC-CCCEEE
Confidence 7 8887888888 899775443222233 11111 1112445555553 433211 45555 3 666 899998
Q ss_pred Eccc-c-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--
Q 010058 231 AGAS-A-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK-- 305 (519)
Q Consensus 231 ~~~s-n-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~-- 305 (519)
++.+ + +|...|. |++. |+++++|++|+.|..+.++. .+|++++|.||++ ||.| |+++++++..
T Consensus 146 ~~~~e~~tG~~~~~-----i~~~-~~~~~vD~~q~~g~~~id~~-----~~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~ 213 (361)
T 3m5u_A 146 ICSNNTIYGTQYQN-----YPKT-KTPLIVDASSDFFSRKVDFS-----NIALFYGGVQKNA-GISGLSCIFIRKDMLER 213 (361)
T ss_dssp EESEETTTTEECSS-----CCCC-SSCEEEECGGGTTSSCCCCT-----TEEEEEEETTTTS-SCTTCEEEEEEHHHHHH
T ss_pred EeCCCCCcceeCCc-----cccc-CCEEEEEcccccCCCCCCcc-----cCCEEEEechhcc-CCCccEEEEEcHHHHhh
Confidence 8733 3 6877662 5554 99999999999998887665 4699999999999 7998 9999998642
Q ss_pred ccc-ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcC-C-EEec
Q 010058 306 EIN-KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERG-Y-DLVS 381 (519)
Q Consensus 306 ~~~-~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~ 381 (519)
+.| +... ..++..... .....+||+...+.++..|++++.+. +++.+.++..++++++.+.|++++ + .+..
T Consensus 214 ~~~~~~p~--~~~~~~~~~---~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~ 288 (361)
T 3m5u_A 214 SKNKQIPS--MLNYLTHAE---NQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHA 288 (361)
T ss_dssp HHTCCCCG--GGCHHHHHH---TTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESS
T ss_pred hcCCCCCc--eeehHHHhh---cCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccC
Confidence 222 1111 111111111 12234799999999999999999887 799999999999999999999986 5 5543
Q ss_pred CCCCcceeeeeccCC---CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNK---GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~---~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+.......++.+..+ +++ .++...|+++||.+. +|... .+++|+|+..++| ++|+++++++|+++
T Consensus 289 ~~~~rs~~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~----~g~~~---~g~iRiS~~~~~t----~edId~l~~al~~~ 356 (361)
T 3m5u_A 289 DKKDRSLMNVSFNIAKNKDLE-PLFVKEAEEAGMIGL----KGHRI---LGGIRASIYNALN----LDQVKTLCEFMKEF 356 (361)
T ss_dssp CGGGBCSSEEEEEESSCTTHH-HHHHHHHHHTTEECC----BCCTT---TCSEEEECCTTSC----HHHHHHHHHHHHHH
T ss_pred CHHHcCCeEEEEECCCchhhh-HHHHHHHHHCCCEEe----cCCCc---cCeEEEEccCCCC----HHHHHHHHHHHHHH
Confidence 211111123333322 234 467788888999985 34331 2569999999998 99999999999998
Q ss_pred HHH
Q 010058 459 VKL 461 (519)
Q Consensus 459 l~~ 461 (519)
.+.
T Consensus 357 ~~~ 359 (361)
T 3m5u_A 357 QGK 359 (361)
T ss_dssp HHH
T ss_pred HHh
Confidence 763
No 91
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.1e-25 Score=235.42 Aligned_cols=352 Identities=12% Similarity=0.108 Sum_probs=238.4
Q ss_pred cCHHHHHHHHHHHH--------hcccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHH
Q 010058 60 IDPEIADIIELEKA--------RQWKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQK 129 (519)
Q Consensus 60 ~~~~~~~~~~~e~~--------~~~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~ 129 (519)
+.+.++..+.+... ...+.|+|..+++. +++.+.+++.+.+.+... ..|+...+..++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~ 106 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMV------NQYSPTRGRPSLINSLIK 106 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGG------GSCCCTTCCHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCC------CCCCCCCCCHHHHHHHHH
Confidence 45556666555431 33467899877653 578999999988764111 123333445678877778
Q ss_pred HHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC
Q 010058 130 RALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES 208 (519)
Q Consensus 130 ~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~ 208 (519)
++.+.+|.+.+. .+|++++|++ |+..++.++++|||+|+++++.|.++.. .+...|..+..+++ +++
T Consensus 107 ~l~~~~g~~~~~--~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~~--~~~ 174 (447)
T 3b46_A 107 LYSPIYNTELKA--ENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIP--------NIELCGGKVVYVPI--NPP 174 (447)
T ss_dssp HHTTTTTSCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEEE--ECC
T ss_pred HHHHhcCCCCCh--hhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEeC--CCc
Confidence 888888864322 3699999987 9988999999999999999987766543 22334555555554 322
Q ss_pred -----------CCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccCCC
Q 010058 209 -----------TGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAGVI 272 (519)
Q Consensus 209 -----------~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~ 272 (519)
++.+|+++|++++++ ++++|+++ ++| +|... ++++|+++|++||+++|+|++|.... ..+..
T Consensus 175 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~-~~g~~ 252 (447)
T 3b46_A 175 KELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLY-FTDSF 252 (447)
T ss_dssp GGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB-CSSCC
T ss_pred cccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcc-cCCCC
Confidence 467999999999875 89999888 666 77664 58899999999999999999976432 22211
Q ss_pred CC--CC----CCCeEEEEcCCCcc--cCCCcceEEe-ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHH
Q 010058 273 PS--PF----EYADVVTTTTHKSL--RGPRGAMIFF-RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLA 343 (519)
Q Consensus 273 ~~--p~----~~~di~~~S~~K~l--~GprgG~i~~-~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~ 343 (519)
.. .+ .+.++++.|+||++ +|+|.|++++ ++ ++.+.+....... ..+++....+++.
T Consensus 253 ~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~--------------~l~~~l~~~~~~~-~~~~~~~~~~a~~ 317 (447)
T 3b46_A 253 TRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNA--------------ELLSYAAKAHTRI-CFASPSPLQEACA 317 (447)
T ss_dssp CCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCH--------------HHHHHHHHHHHHH-TSSCCHHHHHHHH
T ss_pred cCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCH--------------HHHHHHHHHHhhc-cCCCChHHHHHHH
Confidence 00 11 14789999999987 5788899999 66 4444443221111 1234555556666
Q ss_pred HHHHHhcC-HhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC--------------CCcHHHHHHhh-
Q 010058 344 VALKQVKT-PEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK--------------GIDGSRVEKVL- 407 (519)
Q Consensus 344 ~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~--------------~~~~~~~~~~L- 407 (519)
.+++.... ..+++.+++++++++.+.+.|++.|+.+..+ ..+.++++++... +.+..++.+.|
T Consensus 318 ~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 396 (447)
T 3b46_A 318 NSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAP-EGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLI 396 (447)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECC-SBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHH
T ss_pred HHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-CeeEEEEEecccccCccccccccccccCCCHHHHHHHHH
Confidence 67765422 2357888999999999999999999887654 3356667776432 13455677666
Q ss_pred cccCeEEcccccCCCC-C-----CCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 408 ESVHIAANKNTVPGDV-S-----AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 408 ~~~gI~v~~~~~p~~~-~-----~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
+++||.+. |+.. . +...++|||++.. + ++++++.++.|.+
T Consensus 397 ~~~gV~v~----pg~~f~~~~~~~~~~~~iRls~~~--~----~e~l~~~~~~l~~ 442 (447)
T 3b46_A 397 NELGVVAI----PPTEFYIKEHEKAAENLLRFAVCK--D----DAYLENAVERLKL 442 (447)
T ss_dssp HHTCEECB----CGGGGSCGGGGGGGTTEEEEECCS--C----HHHHHHHHHHGGG
T ss_pred HhCCEEEE----CchHhCCCCccCCCCCEEEEEEeC--C----HHHHHHHHHHHHH
Confidence 46899996 4432 1 1125789999863 4 7888888887765
No 92
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.94 E-value=9.8e-26 Score=232.66 Aligned_cols=343 Identities=10% Similarity=0.031 Sum_probs=230.0
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..+++. +++.|.+++.+.+.+....+|+ ...+..++++.+.+++.+.+|.+.+. ..+|++++|++
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~~~la~~~~~~~~~~~~~-~~~i~~~~g~~ 95 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYT------RGFGHPALVKALSCLYGKIYQRQIDP-NEEILVAVGAY 95 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCC------CTTCCHHHHHHHHHHHHHHHTSCCCT-TTSEEEESHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCC------CCCChHHHHHHHHHHHHHHhCCCCCC-CCCEEEeCCcH
Confidence 467899877764 6899999999988653222333 22334677777778888888764211 01599999987
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC--------CCCCCCCHHHHHHHhhhh
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD--------ESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d--------~~~~~iD~d~l~~~i~~~ 224 (519)
++..++.++++|||+|+++++.|.++.. .+...|..+..+++... .+++.+|++++++++++
T Consensus 96 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~- 166 (410)
T 3e2y_A 96 GSLFNSIQGLVDPGDEVIIMVPFYDCYEP--------MVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS- 166 (410)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT-
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC-
Confidence 8888999999999999999977766543 22233555555554321 13456899999999876
Q ss_pred CCcEEEEc-ccc-cccc---ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC------CCCeEEEEcCCCcc--c
Q 010058 225 RPKLIVAG-ASA-YARL---YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF------EYADVVTTTTHKSL--R 291 (519)
Q Consensus 225 k~klIi~~-~sn-~g~~---~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~------~~~di~~~S~~K~l--~ 291 (519)
++++|+++ ++| +|.. .++++|+++|+++|+++|+|++|.... ..+....++ ...++++.|++|++ +
T Consensus 167 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~ 245 (410)
T 3e2y_A 167 KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLV-YTGHTHVKIATLPGMWERTITIGSAGKTFSVT 245 (410)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB-CTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCG
T ss_pred CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcc-cCCCCCCCHHHcCCccCeEEEEecchhhcCCC
Confidence 89999888 666 7766 468999999999999999999986422 222111111 13458888999987 5
Q ss_pred CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHH------hcCHhHHHHHHHHHHHH
Q 010058 292 GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ------VKTPEYKAYQEQVLSNS 365 (519)
Q Consensus 292 GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~------~~~~~~~~~~~~~~~~~ 365 (519)
|+|.|++++++ ++.+.+...... ...+++....+++..+++. .....+++..+++.+++
T Consensus 246 G~r~G~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (410)
T 3e2y_A 246 GWKLGWSIGPA--------------HLIKHLQTVQQN-SFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKR 310 (410)
T ss_dssp GGCCEEEECCH--------------HHHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred CceEEEEEECH--------------HHHHHHHHHHHh-hccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHH
Confidence 77889999987 455544432221 1234455566666666663 12335688889999999
Q ss_pred HHHHHHHHhcCCEEecCCCCcceeeeeccCC--CCcH--------HHHH-HhhcccCeEEcccccCCCCC--CCCCCeEE
Q 010058 366 SKFARSLLERGYDLVSGGTENHLVLVNLRNK--GIDG--------SRVE-KVLESVHIAANKNTVPGDVS--AMVPGGIR 432 (519)
Q Consensus 366 ~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~--~~~~--------~~~~-~~L~~~gI~v~~~~~p~~~~--~~~~~~iR 432 (519)
+.+.+.|++.|+.+..+. .+.+.++++... +++. .++. .+|+++||.+......+... +...+.||
T Consensus 311 ~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iR 389 (410)
T 3e2y_A 311 DRMVRLLNSVGLKPIVPD-GGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVR 389 (410)
T ss_dssp HHHHHHHHTTTCEEEBCS-BSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEE
T ss_pred HHHHHHHHHCCCeecCCC-ccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEE
Confidence 999999999999876653 355667766431 2221 2444 46678899997422111100 12357899
Q ss_pred eccCccccCCCCHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
|++.. + +++++++++.|++
T Consensus 390 is~~~--~----~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 390 FCFIK--K----DSTLDAAEEIFRA 408 (410)
T ss_dssp EECCC--C----HHHHHHHHHHHHT
T ss_pred EEEcC--C----HHHHHHHHHHHHh
Confidence 99754 4 7999999998864
No 93
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.94 E-value=5.3e-26 Score=232.42 Aligned_cols=333 Identities=10% Similarity=0.060 Sum_probs=214.5
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH-HHHcC-CCCCCCcceEEeCCcHHHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRA-LDAFQ-LDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~-~~~~g-~~~~~~~~~V~~~sGs~a~~ 156 (519)
|.+....-.+++.+++++.+.+.+.+ +++......++| +.+ ++++| .+. .|.++||+.|+.
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~--------~~~~~~~~~~l~----~~~~a~~~g~~~~-----~v~~~sgt~al~ 67 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHI--------YTNYGPINQRFE----QTIMSGFFQNRGA-----VTTVANATLGLM 67 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTC--------CSSSCHHHHHHH----HHHHHHTSTTCSE-----EEEESCHHHHHH
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCC--------cccCCHHHHHHH----HHHHHHHhCCCCe-----EEEeCCHHHHHH
Confidence 44443333457888999999887732 111124566666 778 89999 332 477888888888
Q ss_pred HHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhC--CcEEEEcc
Q 010058 157 QVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFR--PKLIVAGA 233 (519)
Q Consensus 157 ~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k--~klIi~~~ 233 (519)
.++.++ ++|||+|++++++|.++... +...|..+..+ +++++++.+|++++++++...+ ||+|+.+
T Consensus 68 ~al~~l~~~~Gd~Vi~~~~~~~~~~~~--------~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~- 136 (377)
T 3ju7_A 68 AAIQLKKRKKGKYALMPSFTFPATPLA--------AIWCGLEPYFI--DISIDDWYMDKTVLWDKIEELKEEVAIVVPY- 136 (377)
T ss_dssp HHHHHHSCTTCCEEEEESSSCTHHHHH--------HHHTTCEEEEE--CBCTTTCSBCHHHHHHHHHHHGGGEEEECCB-
T ss_pred HHHHHcCCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEE--ecCCccCCcCHHHHHHHHhcCCCCceEEEEE-
Confidence 888888 99999999999888776542 22345444444 4566678999999999883336 8888743
Q ss_pred ccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC-CCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCc
Q 010058 234 SAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQ 312 (519)
Q Consensus 234 sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~-~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~ 312 (519)
+.+|...|+++|.++|+ +|++||+|++|+.|....+... ..+..+++++++.||+++++.||+++++++
T Consensus 137 ~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~--------- 206 (377)
T 3ju7_A 137 ATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNE--------- 206 (377)
T ss_dssp CGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCH---------
T ss_pred CCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCH---------
Confidence 22799999999999999 9999999999998876543322 122244555566789998888899998774
Q ss_pred chhhhHHHHhhhcccCCC--------CC-CccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC---CEEe
Q 010058 313 EVMYAYEDKINQAVFPGL--------QG-GPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG---YDLV 380 (519)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~--------~g-~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---~~~~ 380 (519)
++.+++......+. .| +..+..+.+ +.++..+ ..++.+.++.+++++.+.+.|.+.+ +.+.
T Consensus 207 ----~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~a-a~~~~~l--~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~ 279 (377)
T 3ju7_A 207 ----EDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAA-AIGIATM--KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQ 279 (377)
T ss_dssp ----HHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHH-HHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCB
T ss_pred ----HHHHHHHHHHhcCCCCCCceeeccccCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Confidence 34443332221110 01 111111111 1122222 3467888899999999999999884 2222
Q ss_pred cCCC--Cccee-eeeccCCCCcHHHHHHhhcccCeEEccccc-CCCCCC---------------CCCCeEEeccCccccC
Q 010058 381 SGGT--ENHLV-LVNLRNKGIDGSRVEKVLESVHIAANKNTV-PGDVSA---------------MVPGGIRMGTPALTSR 441 (519)
Q Consensus 381 ~~~~--~~~~~-~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~-p~~~~~---------------~~~~~iRi~~~~~ttr 441 (519)
.... ..+.+ .+.+ +.+.+.+++.+.|.++||.++..+. |.+..+ .....||+.++...+
T Consensus 280 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t- 357 (377)
T 3ju7_A 280 LQKTEAVIQQFMPILC-PEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMT- 357 (377)
T ss_dssp CCCCSCBCCSSEEEEC-CTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCC-
T ss_pred CCCCCcceEEEEEEEe-CChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCC-
Confidence 2211 22222 2222 2233578899999999999986542 222111 013468888776666
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 010058 442 GFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 442 g~~~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|.+++..
T Consensus 358 ---~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 358 ---KEIVEQIVICLGQKVVS 374 (377)
T ss_dssp ---HHHHHHHHHHHTC----
T ss_pred ---HHHHHHHHHHHHHHHhc
Confidence 99999999999888764
No 94
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.94 E-value=8.8e-25 Score=221.78 Aligned_cols=316 Identities=16% Similarity=0.125 Sum_probs=223.5
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhc--cCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNK--YSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~--~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
++.|+|..++++ +++.|++++.+.+.+. ...+|+.. ...+++ +++++++|++++ +|.+++|
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-------~~~~lr----~~la~~~g~~~~----~i~~t~g 90 (360)
T 3hdo_A 26 ASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA-------SSQKLR----EVAGELYGFDPS----WIIMANG 90 (360)
T ss_dssp TTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS-------SCHHHH----HHHHHHHTCCGG----GEEEESS
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC-------chHHHH----HHHHHHhCcCcc----eEEEcCC
Confidence 356899988885 5899999999988762 01134332 123454 788888898764 5888888
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
++ |+..++.++++|||+|++.++.|.++.. .+...|..+..++ .++ ++.+ +++++ ..++++|+
T Consensus 91 ~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~-~~~~--~~l~~---~~~~~~v~ 154 (360)
T 3hdo_A 91 SDEVLNNLIRAFAAEGEEIGYVHPSYSYYGT--------LAEVQGARVRTFG--LTG-DFRI--AGFPE---RYEGKVFF 154 (360)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHHTCEEEEEC--BCT-TSSB--TTCCS---SBCSSEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCChHHHHH--------HHHHCCCEEEEee--CCC-CCCH--HHHHh---hcCCCEEE
Confidence 87 8888999999999999999977766543 2223455555554 342 3444 44432 23578888
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---CCCeEEEEcCCCcc--cCCCcceEEeecc
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSL--RGPRGAMIFFRKG 303 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~~~di~~~S~~K~l--~GprgG~i~~~~~ 303 (519)
++ ++| +|...|.+++.++|+++|+++|+|++|... . +....++ ...++++.|+||++ +|.|.|++++++
T Consensus 155 i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~-~--~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~- 230 (360)
T 3hdo_A 155 LTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEF-A--ESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP- 230 (360)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGG-S--SCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH-
T ss_pred EeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhh-C--CcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCH-
Confidence 87 666 899999999999999999999999998641 1 1110000 13568889999986 577889999977
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGG 383 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 383 (519)
++.+.+.....+ .+++....+++..+++. ...+++..+++.++++++.+.|++.|+.+..+
T Consensus 231 -------------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~- 291 (360)
T 3hdo_A 231 -------------EVIAALDKIRDH---YNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGYDVIPS- 291 (360)
T ss_dssp -------------HHHHHHHHHSCS---CCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECCC-
T ss_pred -------------HHHHHHHHhCCC---CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcCC-
Confidence 566655544322 34566666666677764 23468889999999999999999989887543
Q ss_pred CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
...++++.+. +.+..++.+.|.++||.++ |+.. +..++++||++. + ++|+++++++|+++-+
T Consensus 292 -~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~----~~~~-~~~~~~iRis~~---~----~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 292 -QGNYLFATPP--DRDGKRVYDGLYARKVLVR----HFSD-PLLAHGMRISIG---T----REEMEQTLAALKEIGE 353 (360)
T ss_dssp -SSSEEEEECT--TCCHHHHHHHHHHTTEECB----CCCS-TTTTTSEEEECC---C----HHHHHHHHHHHHHHHC
T ss_pred -CccEEEEECC--CCCHHHHHHHHHHCCEEEE----ECCC-CCCCCEEEEEcC---C----HHHHHHHHHHHHHHhc
Confidence 2345555543 4578889999999999997 4332 234578999975 4 7999999999988764
No 95
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.94 E-value=6.4e-27 Score=238.68 Aligned_cols=342 Identities=11% Similarity=0.053 Sum_probs=221.5
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCC---CCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCcHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGAR---YYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS-LSGSP 153 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~---~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~-~sGs~ 153 (519)
...+.|+..++|++|++++...+.+.+ ++|.+. ++.+.+. .++-+.+++.+++++|++.+ .+|++ ++|++
T Consensus 28 ~yl~~agpt~~p~~V~~a~~~~~~~~~--~n~~s~~~~~h~~~~~-~~~~~~ar~~la~ll~~~~~---~evif~t~~~T 101 (386)
T 3qm2_A 28 VFNFSSGPAMLPAEVLKLAQQELCDWH--GLGTSVMEISHRGKEF-IQVAEEAEQDFRDLLNIPSN---YKVLFCHGGGR 101 (386)
T ss_dssp CEECCSSSCCCCHHHHHHHTCC--------------------------CCHHHHHHHHHHHTCCTT---EEEEEEESCTT
T ss_pred CccccCCCCCCCHHHHHHHHHHHHhcc--ccCccccccCCCCHHH-HHHHHHHHHHHHHHhCCCCC---ceEEEEcCCch
Confidence 456788999999999999999887644 333321 1112222 33445778999999999542 14666 55555
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++.+++.+++++||+|++....+.+| ++..... -.| .+..++.+..+++..+|+++++.++++ +|++|.++
T Consensus 102 ~a~n~ai~~l~~~gd~v~~~~~~~~~~--~~~~~a~----~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~-~t~lV~~~ 173 (386)
T 3qm2_A 102 GQFAGVPLNLLGDKTTADYVDAGYWAA--SAIKEAK----KYC-APQIIDAKITVDGKRAVKPMREWQLSD-NAAYLHYC 173 (386)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSHHHH--HHHHHHT----TTS-EEEEEECEEEETTEEEECCGGGCCCCT-TCSCEEEC
T ss_pred HHHHHHHHhccCCCCeEEEEeCCHHHH--HHHHHHH----HhC-CeEEEecCcccCCCCCCchHHHhhcCC-CCcEEEEE
Confidence 88889999999999998766544444 2221111 124 455555431012223777788777776 89998887
Q ss_pred cc-c-cccc-ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--c
Q 010058 233 AS-A-YARL-YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK--E 306 (519)
Q Consensus 233 ~s-n-~g~~-~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~--~ 306 (519)
.+ + +|.. .|+++|. +|+++++|++|+.|..+.++... |++++|.||++ ||.| |+++++++.. +
T Consensus 174 h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~-----~~~~~s~hK~l-GP~G~g~l~v~~~~~~~~ 242 (386)
T 3qm2_A 174 PNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY-----GVIYAGAQKNI-GPAGLTLVIVREDLLGKA 242 (386)
T ss_dssp SEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC-----SEEEEETTTTT-CCTTEEEEEEEGGGCSCC
T ss_pred CCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc-----CEEEEeccccc-CCCccEEEEECHHHHhhh
Confidence 33 3 6985 7888874 79999999999999988877654 57889999999 7999 9999998642 2
Q ss_pred ccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcCCEEe-cCCC
Q 010058 307 INKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERGYDLV-SGGT 384 (519)
Q Consensus 307 ~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~ 384 (519)
.|+... ..++..... .....+||+...+.++..|++++... +++.+.++..++++++.+.|+++|+-.. .+..
T Consensus 243 ~~~~p~--~~~~~~~~~---~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~ 317 (386)
T 3qm2_A 243 HESCPS--ILDYTVLND---NDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQA 317 (386)
T ss_dssp CTTSCG--GGCHHHHHH---C-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGG
T ss_pred cccCCc--HHHHHHHhh---cCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHH
Confidence 221111 111111111 12234789999999999999998877 7899999999999999999999876222 1111
Q ss_pred C--cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 385 E--NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 385 ~--~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
. ...+.+.+...+++ ..+...|+++||.+. +|... .+++|+|+..++| ++|+++++++|+++.+.
T Consensus 318 ~rs~~iv~f~~~~~~~~-~~~~~~L~~~gI~~~----~g~~~---~~~iRiS~~~~~t----~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 318 NRSRMNVPFQLADNTLD-KVFLEESFAAGLHAL----KGHRV---VGGMRASIYNAMP----IEGVKALTDFMIDFERR 384 (386)
T ss_dssp GBCSSEEEEEESSGGGH-HHHHHHHHHTTEECC----BCCTT---TCSEEEECCTTSC----HHHHHHHHHHHHHHHHH
T ss_pred HcCceEEEEECCCcccc-HHHHHHHHHCCCEEe----CCCCC---cCeEEEEcCCCCC----HHHHHHHHHHHHHHHHh
Confidence 1 12233333322344 456666888999985 34332 2469999999888 99999999999998753
No 96
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.94 E-value=3e-25 Score=232.16 Aligned_cols=341 Identities=15% Similarity=0.118 Sum_probs=219.1
Q ss_pred ccCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+.|+|..+++ +++|.|.+++.+.+.+.. ..++...|+...+..++++.+.+++. +|+..+. .+|++++|++
T Consensus 69 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~--~~i~~t~G~~ 142 (449)
T 3qgu_A 69 AKIISLGIGDTTEPLPKYIADAMAKAAAGLA--TREGYSGYGAEQGQGALREAVASTFY--GHAGRAA--DEIFISDGSK 142 (449)
T ss_dssp CCCEECSSCCCCCCCCHHHHHHHHHHHHGGG--GSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCG--GGEEEESCHH
T ss_pred CCEEEeeCCCCCCCCCHHHHHHHHHHHHhhc--cccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCH--HHEEEccCHH
Confidence 45789988876 368999999999887521 11222334444556777765555554 4443221 3699999998
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee----------eEEEeeeeCCC-CCCCCHHHHHHHh
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF----------FETMPYRLDES-TGYIDYEQLEKSA 221 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~----------~~~v~~~~d~~-~~~iD~d~l~~~i 221 (519)
++..+ .++++|||+|++.++.|.++..... ..|.. +..++ ++++ +...|++++
T Consensus 143 ~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~--------~~g~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---- 207 (449)
T 3qgu_A 143 CDIARI-QMMFGSKPTVAVQDPSYPVYVDTSV--------MMGMTGDHNGTGFDGIEYMV--CNPDNHFFPDLSKA---- 207 (449)
T ss_dssp HHHHHH-HHHHCSSSCEEEEESCCTHHHHHHH--------HHTCSCCBCSSSBTTEEEEE--CCGGGTTCCCGGGC----
T ss_pred HHHHHH-HHHhCCCCEEEEcCCCChhHHHHHH--------HcCCcccccccccceeEEEe--cccccCCcCChhHc----
Confidence 66645 8889999999999988877654222 22322 34444 3322 345555432
Q ss_pred hhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC------CCCeEEEEcCCCcc
Q 010058 222 ALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF------EYADVVTTTTHKSL 290 (519)
Q Consensus 222 ~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~------~~~di~~~S~~K~l 290 (519)
.++++|+++ ++| +|...+ +++|+++|+++|+++|+|++|..... .+..+.++ ...++++.|++|++
T Consensus 208 --~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 284 (449)
T 3qgu_A 208 --KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYIS-NPDCPKTIYEIPGADEVAIETCSFSKYA 284 (449)
T ss_dssp --CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCC-CTTSCSSGGGSTTGGGTEEEEEECSGGG
T ss_pred --CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhc-CCCCCCCHhhccCCCCcEEEEecchhhc
Confidence 378999988 666 777665 77888889999999999999875322 22111111 14579999999987
Q ss_pred --cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH
Q 010058 291 --RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKF 368 (519)
Q Consensus 291 --~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l 368 (519)
+|+|.|++++++++.... . ..+...+...... ..++++....++...++........++..+++.++++++
T Consensus 285 g~~G~r~G~~~~~~~~~~~~--~----~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 357 (449)
T 3qgu_A 285 GFTGVRLGWTVVPKALKYAN--G----EPVHADWNRVMTT-CFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQIL 357 (449)
T ss_dssp TCTTCCCEEEECCTTCBCTT--S----CBHHHHHHHHHHH-SCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccceeEEEecCHHHHhhh--h----hhHHHHHHHHhhc-ccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 578889999987532000 0 0011111111111 122345555555445554322234678889999999999
Q ss_pred HHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHH
Q 010058 369 ARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 369 ~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~ 446 (519)
.+.|++.|+.+..+ ....++++.+. +.+..++.+.| +++||.++ ||.. ++..+++|||++. ++ ++
T Consensus 358 ~~~L~~~g~~~~~~-~~~~~~~~~~~--~~~~~~~~~~l~~~~gI~v~----pg~~f~~~~~~~iRis~~--~~----~e 424 (449)
T 3qgu_A 358 KTTFTEMGFSVYGG-DDAPYIWVGFP--GKPSWDVFAEILERCNIVTT----PGSGYGPAGEGFVRASAF--GS----RE 424 (449)
T ss_dssp HHHHHHTTCCEEES-SSSSEEEEECT--TSCHHHHHHHHHHHHCEECE----EGGGGCGGGTTEEEEECC--SC----HH
T ss_pred HHHHHHCCCeeeCC-CCeeEEEEECC--CCCHHHHHHHHHHHCCEEEe----cchHhCCCCCCeEEEEec--CC----HH
Confidence 99999999887764 23566777765 56677776655 45699987 4432 2334689999953 35 79
Q ss_pred HHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVK 460 (519)
Q Consensus 447 di~~l~~~l~~~l~ 460 (519)
|++++++.|.++++
T Consensus 425 ~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 425 NILEAVRRFKEAYG 438 (449)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998885
No 97
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.94 E-value=5.9e-25 Score=226.30 Aligned_cols=332 Identities=16% Similarity=0.140 Sum_probs=227.4
Q ss_pred CeeecCCCCC---CcHHHHHHHhhHhhhccCCCCCCC-CCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 78 GLELIPSENF---TSVSVMQAVGSVMTNKYSEGYPGA-RYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 78 ~i~L~a~en~---~~~~V~ea~~~~l~~~~~~g~p~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
.+++..+++. .+|.|.+++.+.+.+ +..+..+. ..|+..+...+++ +.+++++|.+ .+|.+++|++
T Consensus 48 ~i~~~~~~~~~~~~~p~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~-----~~i~~~sG~~ 117 (401)
T 2bwn_A 48 ITVWCGNDYLGMGQHPVVLAAMHEALEA-VGAGSGGTRNISGTTAYHRRLE----AEIAGLHQKE-----AALVFSSAYN 117 (401)
T ss_dssp EEECSCSCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTBCCBHHHHHHH----HHHHHHTTCS-----EEEEESCHHH
T ss_pred EEEeeCCCcccCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCChHHHHHHH----HHHHHHhCCC-----cEEEECCcHH
Confidence 3566555552 467899999998875 21111111 1244445566565 7888889874 2699999999
Q ss_pred HHHHHHHhhc--CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh---hCCcE
Q 010058 154 ANFQVYTALL--KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL---FRPKL 228 (519)
Q Consensus 154 a~~~~~~all--~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~---~k~kl 228 (519)
++..++.++. .|||+|++.++.|+++.... ...|..+..++ .+ |++++++.++. .++++
T Consensus 118 a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~--------~~~g~~~~~v~--~~------d~~~le~~l~~~~~~~~~~ 181 (401)
T 2bwn_A 118 ANDATLSTLRVLFPGLIIYSDSLNHASMIEGI--------KRNAGPKRIFR--HN------DVAHLRELIAADDPAAPKL 181 (401)
T ss_dssp HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHH--------HHSCCCEEEEC--TT------CHHHHHHHHHHSCTTSCEE
T ss_pred HHHHHHHHHhcCCCCCEEEECchhhHHHHHHH--------HHcCCeEEEEc--CC------CHHHHHHHHHhhccCCceE
Confidence 8887777653 69999999998887765432 22344444443 22 78899988873 37889
Q ss_pred EEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccc-cC--CC-CCCC-CCCeEEEEcCCCcccCCCcceEEee
Q 010058 229 IVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVA-AG--VI-PSPF-EYADVVTTTTHKSLRGPRGAMIFFR 301 (519)
Q Consensus 229 Ii~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~-~~--~~-~~p~-~~~di~~~S~~K~l~GprgG~i~~~ 301 (519)
|+++ ++| +|...|+++|.++|+++|+++|+|++|..|... .+ .. ...+ ...|+++.|++|++++ .||+++++
T Consensus 182 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~ 260 (401)
T 2bwn_A 182 IAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAAS 260 (401)
T ss_dssp EEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEEC
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecC
Confidence 8888 555 799999999999999999999999999866542 11 10 0011 1358999999999865 46999887
Q ss_pred cccccccccCcchhhhHHHHhhhcc--cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEE
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAV--FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDL 379 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~--~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 379 (519)
+ ++.+.+.... +....++++ ..++++.++++.+...++++..+++.++++++.+.|++.|+++
T Consensus 261 ~--------------~~~~~l~~~~~~~~~~~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 325 (401)
T 2bwn_A 261 A--------------RMVDAVRSYAPGFIFSTSLPP-AIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPI 325 (401)
T ss_dssp H--------------HHHHHHHHHCHHHHTSBCCCH-HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred H--------------HHHHHHHHhCcCceecCCCCH-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 6 4444333211 111123444 6667777888887776678899999999999999999888877
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+.+. .+++++.+.. +.+..++.+.| ++.||.++....++. +.+.+.+|++++..++ ++|++++++.|+++
T Consensus 326 ~~~~--~~~~~~~~~~-~~~~~~~~~~L~~~~gi~v~~~~~~~~--~~~~~~iRis~~~~~t----~~~i~~~~~~l~~~ 396 (401)
T 2bwn_A 326 IDHG--SHIVPVVIGD-PVHTKAVSDMLLSDYGVYVQPINFPTV--PRGTERLRFTPSPVHD----LKQIDGLVHAMDLL 396 (401)
T ss_dssp CCCS--SSCEEEECCC-HHHHHHHHHHHHHHHCEECCEECTTTS--CTTCCEEEECCCTTSC----HHHHHHHHHHHHHH
T ss_pred cCCC--CCeEEEEeCC-hHHHHHHHHHHHhcCCEEEeecCCCCC--CCCCceEEEEeeCCCC----HHHHHHHHHHHHHH
Confidence 6532 3466666532 23456777777 478999974322221 1223689999998877 89999999999987
Q ss_pred HH
Q 010058 459 VK 460 (519)
Q Consensus 459 l~ 460 (519)
++
T Consensus 397 ~~ 398 (401)
T 2bwn_A 397 WA 398 (401)
T ss_dssp C-
T ss_pred HH
Confidence 64
No 98
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.94 E-value=1.1e-26 Score=236.93 Aligned_cols=327 Identities=13% Similarity=0.108 Sum_probs=215.7
Q ss_pred eecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHH
Q 010058 80 ELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVY 159 (519)
Q Consensus 80 ~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~ 159 (519)
++..+.+.+++.+++++.+.+...+ |...+...+++ +.+++++|.+. .+.++||+.|+..++
T Consensus 7 ~l~~~~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sgt~al~~~l 68 (373)
T 3frk_A 7 SFKPMHDEIEYEIKFKFEEIYKRNW---------FILGDEDKKFE----QEFADYCNVNY-----CIGCGNGLDALHLIL 68 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTC---------CSSSHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHHHHH
T ss_pred CCCcccCCCCHHHHHHHHHHHHCCC---------ccCCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH
Confidence 3433334457888899888876621 23335566666 88888999863 377777777999899
Q ss_pred Hhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-cc
Q 010058 160 TAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YA 237 (519)
Q Consensus 160 ~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g 237 (519)
.++ ++|||+|++++++|.+.... +...|..+..+ +++++++.+|++++++++++ ++++|++ +| +|
T Consensus 69 ~~l~~~~gd~Vi~~~~~~~~~~~~--------~~~~g~~~~~~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~--~n~~G 135 (373)
T 3frk_A 69 KGYDIGFGDEVIVPSNTFIATALA--------VSYTGAKPIFV--EPDIRTYNIDPSLIESAITE-KTKAIIA--VHLYG 135 (373)
T ss_dssp HHTTCCTTCEEEEETTSCTHHHHH--------HHHHSCEEEEE--CEETTTTEECGGGTGGGCCT-TEEEEEE--ECCTT
T ss_pred HHcCCCCcCEEEECCCCcHHHHHH--------HHHcCCEEEEE--eccccccCcCHHHHHHhcCC-CCeEEEE--ECCCc
Confidence 999 99999999999888776542 22335444444 45556789999999999887 8888884 44 89
Q ss_pred ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEc--CCCcccC-CCcceEEeecccccccccCcch
Q 010058 238 RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTT--THKSLRG-PRGAMIFFRKGVKEINKQGQEV 314 (519)
Q Consensus 238 ~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S--~~K~l~G-prgG~i~~~~~~~~~~~~g~~~ 314 (519)
...|+++|.++|+++|+++|+|++|..|....+..... ..|++++| .||++++ ++||+++++++
T Consensus 136 ~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~--~~d~~~~S~~~~K~l~~~g~gg~~~~~~~----------- 202 (373)
T 3frk_A 136 QPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGS--LGDAAGFSFYPAKNLGSLGDGGAVVTNDK----------- 202 (373)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTS--SSSEEEEECCTTSSSCCSSSCEEEEESCH-----------
T ss_pred CcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccc--cccEEEEeCcCCCccCccceeEEEEeCCH-----------
Confidence 99999999999999999999999998876633221111 36888888 5699987 67899988764
Q ss_pred hhhHHHHhhhcccCC--------CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCc
Q 010058 315 MYAYEDKINQAVFPG--------LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTEN 386 (519)
Q Consensus 315 ~~~~~~~i~~~~~~~--------~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 386 (519)
++.+.+......+ ..|.+. .+.++.+++.......+++..++.+++++++.+.|.+.++.+.......
T Consensus 203 --~~~~~~~~~~~~g~~~~~~~~~~g~~~--~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 278 (373)
T 3frk_A 203 --DLAEKIKALSNYGSEKKYHHIYKGFNS--RLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPNVIIPVEADYA 278 (373)
T ss_dssp --HHHHHHHHHHBTTCSBTTBCCSCCCBC--CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTE
T ss_pred --HHHHHHHHHHhcCcccCCccccccccC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEeccCCCCC
Confidence 2333222211111 011100 1112222222222335677888889999999999988774432211111
Q ss_pred --ceeeeeccCCCCcHHHHHHhhcccCeEEcccc-cCCCCCC-----------C------CCCeEEeccCccccCCCCHH
Q 010058 387 --HLVLVNLRNKGIDGSRVEKVLESVHIAANKNT-VPGDVSA-----------M------VPGGIRMGTPALTSRGFVEE 446 (519)
Q Consensus 387 --~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-~p~~~~~-----------~------~~~~iRi~~~~~ttrg~~~~ 446 (519)
.+..+.+. ..+..++.+.|.+.||.++..+ .|....+ . ..+.||++++..+| ++
T Consensus 279 ~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t----~~ 352 (373)
T 3frk_A 279 KHVWYTFVIR--SEKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMK----NE 352 (373)
T ss_dssp ECCCSSEEEE--ESSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCC----HH
T ss_pred ceeeEEEEEE--eCCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCC----HH
Confidence 11112222 1257789999999999998543 2221110 0 11679999998888 99
Q ss_pred HHHHHHHHHHHHHH
Q 010058 447 DFEKVAEFFDAAVK 460 (519)
Q Consensus 447 di~~l~~~l~~~l~ 460 (519)
|++++++.|+++..
T Consensus 353 di~~~~~~l~~~~~ 366 (373)
T 3frk_A 353 EIEYVIDKINAWKL 366 (373)
T ss_dssp HHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999987654
No 99
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=5.5e-26 Score=231.60 Aligned_cols=330 Identities=11% Similarity=0.080 Sum_probs=221.8
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~ 156 (519)
..+++..+.+..++ +++++.+.+... . |...+...+++ +.+++++|.+. .+.+++|+.|+.
T Consensus 7 ~~~~l~~~~~~~~~-~~~~~~~~~~~~--------~-~~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~ 67 (374)
T 3uwc_A 7 PYSYLERQFADIEP-YLNDLREFIKTA--------D-FTLGAELEKFE----KRFAALHNAPH-----AIGVGTGTDALA 67 (374)
T ss_dssp CSCCHHHHTSSCHH-HHHHHHHHHHHT--------C-CSSCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHH
T ss_pred eeeccccCCCCchH-HHHHHHHHHHcC--------C-cccChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHH
Confidence 45677777777777 999998887652 1 23345556666 88889999873 477777877998
Q ss_pred HHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc
Q 010058 157 QVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA 235 (519)
Q Consensus 157 ~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn 235 (519)
.++.++ ++|||+|+++++.|.++... +...|..+..++ .+ +++.+|++++++++++ ++++|+ ++|
T Consensus 68 ~~~~~~~~~~gd~v~~~~~~~~~~~~~--------~~~~g~~~~~~~--~~-~~~~~d~~~l~~~~~~-~~~~v~--~~n 133 (374)
T 3uwc_A 68 MSFKMLNIGAGDEVITCANTFIASVGA--------IVQAGATPVLVD--SE-NGYVIDPEKIEAAITD-KTKAIM--PVH 133 (374)
T ss_dssp HHHHHTTCCTTCEEEEESSSCHHHHHH--------HHHTTCEEEEEC--BC-TTSSBCGGGTGGGCCT-TEEEEC--CBC
T ss_pred HHHHHcCCCCCCEEEECCCccHHHHHH--------HHHcCCEEEEEe--cC-CCCCcCHHHHHHhCCC-CceEEE--EeC
Confidence 899999 99999999999888776542 223355454544 44 5688999999999887 788887 455
Q ss_pred -ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC--CcccC-CCcceEEeecccccccccC
Q 010058 236 -YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRG-PRGAMIFFRKGVKEINKQG 311 (519)
Q Consensus 236 -~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~--K~l~G-prgG~i~~~~~~~~~~~~g 311 (519)
+|...|+++|.++|+++|+++|+|++|..|....+.... ...|++++|+| |++++ +.+|+++++++
T Consensus 134 ~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~--~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~-------- 203 (374)
T 3uwc_A 134 YTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVG--SWGQFACFSLHPLKNLNVWSDAGVIITHSD-------- 203 (374)
T ss_dssp GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT--SSSSEEEEECSSSSSSCCSSCCEEEEESCH--------
T ss_pred CcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeecc--ccccEEEEeCCCCCcCCccceeEEEEeCCH--------
Confidence 889999999999999999999999999887653222111 13699999977 99987 56788888764
Q ss_pred cchhhhHHHHhhhcccCC-------CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC--CEEecC
Q 010058 312 QEVMYAYEDKINQAVFPG-------LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG--YDLVSG 382 (519)
Q Consensus 312 ~~~~~~~~~~i~~~~~~~-------~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~ 382 (519)
++.+.+......+ ...+.+. .+.++.+++.......++++.++..++++++.+.|.+.+ +.+...
T Consensus 204 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 277 (374)
T 3uwc_A 204 -----EYAEKLRLYRNHGLINRDVCVEYGINC-RMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVR 277 (374)
T ss_dssp -----HHHHHHHHHTBTTEEETTEESSCCCBC-BCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCC
T ss_pred -----HHHHHHHHHHhcCccccCccccccccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccC
Confidence 3333222211100 0001110 112222233333334578888999999999999999884 665432
Q ss_pred CCCccee--eeeccCCCCcHHHHHHhhcccCeEEcccc-cCCCCCC-----------------CCCCeEEeccCccccCC
Q 010058 383 GTENHLV--LVNLRNKGIDGSRVEKVLESVHIAANKNT-VPGDVSA-----------------MVPGGIRMGTPALTSRG 442 (519)
Q Consensus 383 ~~~~~~~--~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-~p~~~~~-----------------~~~~~iRi~~~~~ttrg 442 (519)
....... .+.+.. .+..++.+.|.+.||.++..+ .|....+ ...+.+|++++..++
T Consensus 278 ~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t-- 353 (374)
T 3uwc_A 278 REGVYHVFHIYVLRV--KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLT-- 353 (374)
T ss_dssp CTTEECCCSSEEEEE--TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSC--
T ss_pred CCCCceeeEEEEEEc--CCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCC--
Confidence 2211111 111211 257788999999999987432 1111110 011679999998888
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 010058 443 FVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 443 ~~~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|+++++.
T Consensus 354 --~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 354 --EEEINYIIKKVREFYLE 370 (374)
T ss_dssp --HHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHh
Confidence 99999999999998863
No 100
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.94 E-value=1.2e-24 Score=229.20 Aligned_cols=363 Identities=12% Similarity=0.089 Sum_probs=229.6
Q ss_pred HHHHHHHHHHHhcc----cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 010058 63 EIADIIELEKARQW----KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD 138 (519)
Q Consensus 63 ~~~~~~~~e~~~~~----~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~ 138 (519)
++...+.+...+.. ..+.|........|.+.+++.+.+.+ | +|... ....++..+++..+++++++++|++
T Consensus 49 ~~~~~~~~l~~~~~~~~~~~~~lg~~~~~~~p~v~~~~~~~~~~-~---~~~~~-~~~~~g~~~l~~~l~~~la~~~g~~ 123 (474)
T 1wyu_B 49 TLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARLFAD-L---HPYQD-PRTAQGALRLMWELGEYLKALTGMD 123 (474)
T ss_dssp HHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHTTSS-C---CTTSC-GGGCHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhCCCCcccCccccccccccCCHHHHHHHHHHHHh-c---CCCCc-hhhChHHHHHHHHHHHHHHHHHCCC
Confidence 56666665443332 12455422223346677777654322 2 12110 0024567788888889999999997
Q ss_pred CCCCcceEEeCCcHH-HHHHHHHhh----cCCCC-----EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC
Q 010058 139 PAKWGVNVQSLSGSP-ANFQVYTAL----LKPHE-----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES 208 (519)
Q Consensus 139 ~~~~~~~V~~~sGs~-a~~~~~~al----l~pGD-----~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~ 208 (519)
. .+++++|++ ++..++.++ .++|| +|++++..|+++... +...|..+..++ .+ +
T Consensus 124 ~-----~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~--------~~~~G~~vv~v~--~~-~ 187 (474)
T 1wyu_B 124 A-----ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPAT--------ASMAGYQVREIP--SG-P 187 (474)
T ss_dssp E-----EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHH--------HHHTTCEEEEEC--BC-T
T ss_pred c-----eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHH--------HHHCCCEEEEec--CC-C
Confidence 5 255555554 777655544 46898 999999888776542 233455555555 44 4
Q ss_pred CCCCCHHHHHHHhhhhCCcEEEEcccc-cccc-ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CCeEEEEc
Q 010058 209 TGYIDYEQLEKSAALFRPKLIVAGASA-YARL-YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YADVVTTT 285 (519)
Q Consensus 209 ~~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~-~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~S 285 (519)
++.+|+++|++++++ ++++|+++.+| +|.. .++++|+++|+++|+++|+|++|..+... .. .+.. ++|++++|
T Consensus 188 ~~~~d~~~L~~~i~~-~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g--~~-~~~~~g~di~~~s 263 (474)
T 1wyu_B 188 EGEVDLEALKRELGP-HVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMG--WA-RPGDMGFDVVHLN 263 (474)
T ss_dssp TSSBCHHHHHHHCST-TEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTT--TC-CHHHHTCSEEECC
T ss_pred CCCcCHHHHHHhhCC-CceEEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhcc--CC-CcccCCCcEEEEe
Confidence 588999999999986 89999998545 7877 69999999999999999999999765531 11 1111 58999999
Q ss_pred CCCcccCC------CcceEEeecccc--cc-cc---cCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh
Q 010058 286 THKSLRGP------RGAMIFFRKGVK--EI-NK---QGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE 353 (519)
Q Consensus 286 ~~K~l~Gp------rgG~i~~~~~~~--~~-~~---~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~ 353 (519)
+||++.+| +.|++++++++. +. +. .|....+.+.. .........++.+...+++....+......+
T Consensus 264 ~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~ 341 (474)
T 1wyu_B 264 LHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDR--PKSIGRVRSFYGNFLALVRAWAYIRTLGLEG 341 (474)
T ss_dssp TTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCC--TTCCCCSSSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccC--cccCcccccCcCcHHHHHHHHHHHHHHHHHH
Confidence 99998755 569999988531 11 11 11000000000 0000000112234433443344444333456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEe
Q 010058 354 YKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRM 433 (519)
Q Consensus 354 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 433 (519)
+++..+++.++++++.+.|++.|+++..++...+.+++++ +.+.+..++.+.|.+.||.+.....| ....+.+||
T Consensus 342 l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~Gi~~~~~~~~----~~~~~~lRi 416 (474)
T 1wyu_B 342 LKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPPTVYFP----LIVKEALMV 416 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCCEESCS----TTSTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEc-CCCCCHHHHHHHHHHCCccccccccc----cccCCEEEE
Confidence 7788899999999999999998887744332223356665 34567888888888889975211111 123578999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
++...++ ++|++++++.|++++..
T Consensus 417 s~~~~~t----~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 417 EPTETEA----KETLEAFAEAMGALLKK 440 (474)
T ss_dssp CCCTTSC----HHHHHHHHHHHHHHHTS
T ss_pred EeecCCC----HHHHHHHHHHHHHHHHh
Confidence 9987777 89999999999988753
No 101
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.94 E-value=9.5e-25 Score=232.45 Aligned_cols=307 Identities=12% Similarity=0.064 Sum_probs=223.2
Q ss_pred CchhHHHHHHHHHHHHHHHcCCCC--CCCcceEEeCCcHH-HHHHHHHhhcCCC--------CEEEEecCCCcccccccc
Q 010058 116 GNEYIDMAESLCQKRALDAFQLDP--AKWGVNVQSLSGSP-ANFQVYTALLKPH--------ERIMALDLPHGGHLSHGY 184 (519)
Q Consensus 116 ~~~~~~~le~~~~~~~~~~~g~~~--~~~~~~V~~~sGs~-a~~~~~~all~pG--------D~Vl~~~~~~~~~~~~~~ 184 (519)
......++|+.+++++++++|++. +. +...+++|++ |+..++.++.++| |+|++....|.++..
T Consensus 133 ~~p~~~~le~~l~~~la~~~g~~~~~~~--v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~--- 207 (514)
T 3mad_A 133 LWPSTAKFEAEVVAMTAHMLGGDAAGGT--VCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDK--- 207 (514)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTGGGGTSC--CEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHH---
T ss_pred cChHHHHHHHHHHHHHHHHcCCCCccCC--cceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHH---
Confidence 345677888889999999999973 22 2237777776 9998999998877 999999988777543
Q ss_pred cccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhh
Q 010058 185 QTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAH 262 (519)
Q Consensus 185 ~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah 262 (519)
.+...|..++.++ .++ ++.+|+++|++++++ ++++|+++ ++| +|...|+++|+++|++||++||+|++|
T Consensus 208 -----~~~~~G~~v~~v~--~~~-~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~ 278 (514)
T 3mad_A 208 -----AAQYFGIKLVRTP--LDA-DYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACL 278 (514)
T ss_dssp -----HHHHHTCEEEEEC--BCT-TSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred -----HHHHcCCeeEEee--eCC-CCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccc
Confidence 2333455555555 443 688999999999987 89999888 555 899999999999999999999999998
Q ss_pred hhhccc----cCC--CCC--CCCCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhh---------h
Q 010058 263 ISGLVA----AGV--IPS--PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKIN---------Q 324 (519)
Q Consensus 263 ~~g~~~----~~~--~~~--p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~---------~ 324 (519)
..+... .+. .+. ...++|++++|+||++.|+.+ |+++++++. +..... .
T Consensus 279 ~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~-------------~~~~~~~~~~~~~~~~ 345 (514)
T 3mad_A 279 GGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPD-------------LLHYQYFIAADWPGGL 345 (514)
T ss_dssp TTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHH-------------HHTTTCEEESSCTTCS
T ss_pred ccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHH-------------HhccccccccccCCCc
Confidence 755432 111 011 112689999999999766544 999888742 111000 0
Q ss_pred cccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHH
Q 010058 325 AVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRV 403 (519)
Q Consensus 325 ~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~ 403 (519)
...+...|++....++++.+++..+...++++..++..++++++.+.|++. |+.++.+.. .++++ ...+.+..++
T Consensus 346 ~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~--~~~~~--~~~~~~~~~l 421 (514)
T 3mad_A 346 YFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPL--WVIAV--ASDELNIYQV 421 (514)
T ss_dssp EEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCS--SEEEE--ECSSSCHHHH
T ss_pred ccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCe--EEEEE--eCCCCCHHHH
Confidence 011233467777777788888887777778999999999999999999998 888876432 23333 3345678889
Q ss_pred HHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHhh
Q 010058 404 EKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLALK 464 (519)
Q Consensus 404 ~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~~ 464 (519)
.+.|.+.||.+. +.. .++.+|++....++ ++++++++++.|++++....+
T Consensus 422 ~~~L~~~Gi~v~-----g~~---~~~~~Ri~~~~~~~---~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 422 MEEMAGRGWRLN-----GLH---RPPAFHVALTLRHT---EPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp HHHHHTTTCBCE-----EET---TTTEEEEECCGGGG---STTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCEec-----cCC---CCCeEEEEEecCCC---CHHHHHHHHHHHHHHHHHHHh
Confidence 999988999873 111 14679999875443 169999999999999876543
No 102
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.94 E-value=7.3e-25 Score=227.72 Aligned_cols=345 Identities=12% Similarity=0.069 Sum_probs=222.4
Q ss_pred cCeeecCCCCCC-cHHHHHHHhhHhhhccC-CC---CCCCCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCcceEE
Q 010058 77 KGLELIPSENFT-SVSVMQAVGSVMTNKYS-EG---YPGARYYGGNEYIDMAESLCQKRALDAFQ----LDPAKWGVNVQ 147 (519)
Q Consensus 77 ~~i~L~a~en~~-~~~V~ea~~~~l~~~~~-~g---~p~~~~y~~~~~~~~le~~~~~~~~~~~g----~~~~~~~~~V~ 147 (519)
..|+|..++|+. ++.+.+++.+....... ++ ......|+...+..++++.+.+++.+.+| ++++ +|+
T Consensus 37 ~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~----~i~ 112 (428)
T 1iay_A 37 GVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE----RVV 112 (428)
T ss_dssp SBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT----SCE
T ss_pred ceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh----hEE
Confidence 357888888875 45677777643210000 00 00001233333456788777777777777 4453 588
Q ss_pred eCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhh-
Q 010058 148 SLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALF- 224 (519)
Q Consensus 148 ~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~- 224 (519)
+++|++ ++..++.++++|||+|+++++.|.++..... ...|..+..++ .++ +++.+|++++++++++.
T Consensus 113 ~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-------~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~~~ 183 (428)
T 1iay_A 113 MAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLR-------WRTGVQLIPIH--CESSNNFKITSKAVKEAYENAQ 183 (428)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTT-------TTTCCEEEEEC--CCTTTTTCCCHHHHHHHHHHHH
T ss_pred EccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHH-------HhcCCEEEEee--cCCccCCcCCHHHHHHHHHHHH
Confidence 999987 8888999999999999999988876542111 12344444454 333 34578999999988752
Q ss_pred ----CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CC-CC-------Ce--EEE
Q 010058 225 ----RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PF-EY-------AD--VVT 283 (519)
Q Consensus 225 ----k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~-~~-------~d--i~~ 283 (519)
++++|+++ ++| +|...+ +++|.++|+++|+++|+|++|..+........+ .+ .. .| +++
T Consensus 184 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~ 263 (428)
T 1iay_A 184 KSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIV 263 (428)
T ss_dssp HTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEE
T ss_pred hcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEE
Confidence 68888777 767 888888 899999999999999999998753221111100 00 01 46 889
Q ss_pred EcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc--CHhHHHHHH
Q 010058 284 TTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK--TPEYKAYQE 359 (519)
Q Consensus 284 ~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~--~~~~~~~~~ 359 (519)
.|+||++ +|.|.|+++++++ ++.+.+.....+ .+.+....+++..+++... ...+++..+
T Consensus 264 ~s~sK~~g~~Glr~G~~~~~~~-------------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 327 (428)
T 1iay_A 264 YSLSKDMGLPGFRVGIIYSFND-------------DVVNCARKMSSF---GLVSTQTQYFLAAMLSDEKFVDNFLRESAM 327 (428)
T ss_dssp EESTTTSSCGGGCEEEEEESCH-------------HHHHHHHHHHTT---SCCCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ecchhhcCCCCceEEEEEeCCH-------------HHHHHHHHHHhc---ccCCHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 9999987 5777899998542 455544432221 2334444444444443211 113467788
Q ss_pred HHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCC-----CcHHHHHHhhcc-cCeEEcccccCCCC-CCCCCCeEE
Q 010058 360 QVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKG-----IDGSRVEKVLES-VHIAANKNTVPGDV-SAMVPGGIR 432 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~~~L~~-~gI~v~~~~~p~~~-~~~~~~~iR 432 (519)
++.++++++.+.|++.|+.++.+ ..+.++++++.... .+..++.+.|.+ +||.++. +.. ....++++|
T Consensus 328 ~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~----~~~~~~~~~~~iR 402 (428)
T 1iay_A 328 RLGKRHKHFTNGLEVVGIKCLKN-NAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSP----GSSFECQEPGWFR 402 (428)
T ss_dssp HHHHHHHHHHHHHHHTTCCBCCC-SSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEE----GGGGTCSSSSEEE
T ss_pred HHHHHHHHHHHHHHhcCCcccCC-CeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeC----chhhCCCCCCEEE
Confidence 88999999999999988876543 23456677764321 123456677765 5999974 332 111256899
Q ss_pred eccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
|+++ ..+ ++|++++++.|+++++
T Consensus 403 is~~-~~~----~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 403 VCFA-NMD----DGTVDIALARIRRFVG 425 (428)
T ss_dssp EECS-SSC----HHHHHHHHHHHHHHHH
T ss_pred EEEe-cCC----HHHHHHHHHHHHHHHh
Confidence 9987 345 8999999999999886
No 103
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.94 E-value=9.4e-25 Score=238.81 Aligned_cols=307 Identities=15% Similarity=0.113 Sum_probs=214.5
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeee
Q 010058 126 LCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 204 (519)
Q Consensus 126 ~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~ 204 (519)
.+++.+++++|++. .+.+++|++ +|.+++.++++|||+|++..+.|.++... + +...|..+..++..
T Consensus 177 e~e~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~-~------~~l~Ga~~v~v~~~ 244 (730)
T 1c4k_A 177 AAEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS-A------LAMAGGRPVYLQTN 244 (730)
T ss_dssp HHHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH-H------TTTTCCEEEEECEE
T ss_pred HHHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH-H------HHHCCCEEEEEeCC
Confidence 34489999999985 488999996 99999999999999999999888776542 0 22345555555433
Q ss_pred eCCC--CCCCCHHHH-----HHHhhhhC-----C----cEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhcc
Q 010058 205 LDES--TGYIDYEQL-----EKSAALFR-----P----KLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLV 267 (519)
Q Consensus 205 ~d~~--~~~iD~d~l-----~~~i~~~k-----~----klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~ 267 (519)
.+.- .+.+|+++| ++++++.+ + |+|+++.+| +|...|+++|.++|+++|++|++|+||..++.
T Consensus 245 ~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~ 324 (730)
T 1c4k_A 245 RNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQ 324 (730)
T ss_dssp ECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGG
T ss_pred ccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccccccc
Confidence 2210 133677777 88887621 4 888888445 79999999999999999999999999976533
Q ss_pred ccCCC--CCCCC----CCe----EEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccH
Q 010058 268 AAGVI--PSPFE----YAD----VVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHN 336 (519)
Q Consensus 268 ~~~~~--~~p~~----~~d----i~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~ 336 (519)
..+.. ..++. ++| ++++|+||+|+|+++ |+|+++++.. .|.....+ ...++........++|+.
T Consensus 325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l----~g~~~~i~-~~~~~~~~~~~~stsp~~ 399 (730)
T 1c4k_A 325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI----KGQLRYCD-HKHFNNSFNLFMSTSPFY 399 (730)
T ss_dssp SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG----TTSTTCCC-HHHHHHHHHHHSCSSCCH
T ss_pred cCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh----cCcccccC-HHHHHHHHHHhCCCCCcH
Confidence 22211 11221 466 999999999999986 6787776421 11100001 112222211122478899
Q ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh--cCCEEecCCC------------------------------
Q 010058 337 HTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE--RGYDLVSGGT------------------------------ 384 (519)
Q Consensus 337 ~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~--~g~~~~~~~~------------------------------ 384 (519)
..++++.+|++.+..++..+..++..++++.+++.|++ .|+.++.+..
T Consensus 400 ~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (730)
T 1c4k_A 400 PMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWH 479 (730)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTT
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhc
Confidence 99999999998876544577788999999999999998 4888765421
Q ss_pred ------Ccce------eeeec----------cCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCC
Q 010058 385 ------ENHL------VLVNL----------RNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 442 (519)
Q Consensus 385 ------~~~~------~~v~~----------~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg 442 (519)
.++. +++.. ...++++.++.+.|.+.||.+++. ....+|+.++..+|
T Consensus 480 g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~---------~~~~ir~~~s~g~t-- 548 (730)
T 1c4k_A 480 AYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS---------DLNSILFLMTPAET-- 548 (730)
T ss_dssp CCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE---------CSSEEEEECCTTCC--
T ss_pred cccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC---------CCCeEEEEeCCCCC--
Confidence 1111 23333 123578899999998889998642 24679999887777
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 010058 443 FVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 443 ~~~~di~~l~~~l~~~l~~~ 462 (519)
++|+++++++|.++.+..
T Consensus 549 --~e~i~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 549 --PAKMNNLITQLLQLQRLI 566 (730)
T ss_dssp --HHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHhc
Confidence 899999999999988755
No 104
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.94 E-value=3.7e-25 Score=227.88 Aligned_cols=331 Identities=14% Similarity=0.101 Sum_probs=221.8
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHH
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANF 156 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~ 156 (519)
..|+|..+++..++.|.+++.+.+.+. + |.......+++ +.+++++|.+. .|.+++|+.|+.
T Consensus 31 ~~id~~~~~~~~~~~v~~a~~~~~~~~--------~-y~~~~~~~~l~----~~la~~~~~~~-----~v~~~~Gt~a~~ 92 (399)
T 2oga_A 31 PFLDLKAAYEELRAETDAAIARVLDSG--------R-YLLGPELEGFE----AEFAAYCETDH-----AVGVNSGMDALQ 92 (399)
T ss_dssp CSCCHHHHHHHTHHHHHHHHHHHHHHT--------C-CSSSHHHHHHH----HHHHHHTTSSE-----EEEESCHHHHHH
T ss_pred cccccCcCCCCCCHHHHHHHHHHHhcC--------C-CCCchhHHHHH----HHHHHHHCCCe-----EEEecCHHHHHH
Confidence 457777777767799999999887651 1 22224555555 78888999863 488888877988
Q ss_pred HHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc
Q 010058 157 QVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA 235 (519)
Q Consensus 157 ~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn 235 (519)
.++.++ ++|||+|+++++.|.++... +...|..+..++ ++++++.+|++++++++++ ++++|+++ +.
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~--------~~~~g~~~~~~~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~-n~ 160 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWLA--------VSATGATPVPVE--PHEDHPTLDPLLVEKAITP-RTRALLPV-HL 160 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHHH--------HHHTTCEEEEEC--BCSSSSSBCHHHHHHHCCT-TEEEECCB-CG
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHHH--------HHHCCCEEEEEe--cCCCCCCcCHHHHHHhcCC-CCeEEEEe-CC
Confidence 899999 99999999999887765432 223354444444 4544678999999999986 78888753 22
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcC--CCcccCC-CcceEEeecccccccccCc
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGP-RGAMIFFRKGVKEINKQGQ 312 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~--~K~l~Gp-rgG~i~~~~~~~~~~~~g~ 312 (519)
+|...|+++|.++|+++|+++|+|++|..|....+.... ...|++++|+ +|+++++ ++|+++++++
T Consensus 161 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~di~~~S~~~sK~~~~~G~~g~~~~~~~--------- 229 (399)
T 2oga_A 161 YGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIG--AGSSVAAFSFYPGKNLGCFGDGGAVVTGDP--------- 229 (399)
T ss_dssp GGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETT--CTTCEEEEECCTTSSSCCSSCCEEEEESCH---------
T ss_pred cCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecc--cccCEEEEeCCCCccCCcCCceEEEEeCCH---------
Confidence 888899999999999999999999999877543221111 1369999998 5998653 7899988742
Q ss_pred chhhhHHHHhhhcccC-----------CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEe
Q 010058 313 EVMYAYEDKINQAVFP-----------GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLV 380 (519)
Q Consensus 313 ~~~~~~~~~i~~~~~~-----------~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 380 (519)
++.+.+...... +...+++....+++..+++. ++...++..++++++.+.|.++ |+.+.
T Consensus 230 ----~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 300 (399)
T 2oga_A 230 ----ELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLP 300 (399)
T ss_dssp ----HHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCC
T ss_pred ----HHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 333333221111 11113344444444444432 4556777888899999999887 77664
Q ss_pred cCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccc-cCCCC-------C----CC------CCCeEEeccCccccCC
Q 010058 381 SGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNT-VPGDV-------S----AM------VPGGIRMGTPALTSRG 442 (519)
Q Consensus 381 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~-~p~~~-------~----~~------~~~~iRi~~~~~ttrg 442 (519)
..+......++.+.....+..++.+.|.+.||.++..+ .|... + .. ..+.|||+++..++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t-- 378 (399)
T 2oga_A 301 VTAPDTDPVWHLFTVRTERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLE-- 378 (399)
T ss_dssp CCCTTEECCCSSEEEECSSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCC--
T ss_pred CCCCCCcceeEEEEEECCCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCC--
Confidence 32222222222222212357788899988999997421 01000 0 00 02579999988888
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 010058 443 FVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 443 ~~~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|+++++.
T Consensus 379 --~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 379 --RPQALRVIDAVREWAER 395 (399)
T ss_dssp --HHHHHHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 99999999999998863
No 105
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.93 E-value=1e-24 Score=222.29 Aligned_cols=327 Identities=14% Similarity=0.043 Sum_probs=223.1
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.|+|..+++. +++.|.+++.+.+.... +|+ ...+..++++.+.+++.+.+|++.+. .+|++++|++
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--~y~------~~~g~~~lr~~la~~l~~~~g~~~~~--~~i~~t~g~~~ 93 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTHSLN--IYP------KSAFEESLRAAQRGFFKRRFKIELKE--NELISTLGSRE 93 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGGGGG--SCC------CTTCCHHHHHHHHHHHHHHHSCCCCG--GGEEEESSSHH
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhhhcC--CCC------CCCCCHHHHHHHHHHHHHHhCCCCCH--HHEEECcCcHH
Confidence 56888877774 57899999988773321 333 22344678878888888888983211 3588888887
Q ss_pred HHHHHHHhhcCC--CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 154 ANFQVYTALLKP--HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 154 a~~~~~~all~p--GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
++..++.++++| ||+|++.++.|.++.. .+...|..+..+++ +++ +.+++ ++++.+.+ ++++|++
T Consensus 94 al~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~--~~~-~~~~~-~l~~~~~~-~~~~v~~ 160 (376)
T 3ezs_A 94 VLFNFPSFVLFDYQNPTIAYPNPFYQIYEG--------AAKFIKAKSLLMPL--TKE-NDFTP-SLNEKELQ-EVDLVIL 160 (376)
T ss_dssp HHHHHHHHHTTTCSSCEEEEEESCCTHHHH--------HHHHTTCEEEEEEC--CGG-GTSCC-CCCHHHHH-HCSEEEE
T ss_pred HHHHHHHHHcCCCCCCEEEEecCCcHhHHH--------HHHHcCCEEEEccc--CCC-CCcch-hHHhhhcc-CCCEEEE
Confidence 888899999999 9999999977766543 22233544555543 322 22344 66666766 7999998
Q ss_pred c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC----------CCCCeEEEEcCCCcc--cCCC
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP----------FEYADVVTTTTHKSL--RGPR 294 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p----------~~~~di~~~S~~K~l--~Gpr 294 (519)
+ ++| +|...+ +++|+++|+++|+++|+|++|..... .+..... ....++++.|+||++ .|.|
T Consensus 161 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 239 (376)
T 3ezs_A 161 NSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYE-NTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLR 239 (376)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBS-SSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGC
T ss_pred cCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhcc-CCCCCCHHHccccccccccCcEEEEecchhccCCccce
Confidence 7 666 787766 66777779999999999999865322 1211100 125679999999987 5777
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
.|++++++ ++.+.+...... ...+++...++++..+++. ...+++..+++.++++.+.+.|+
T Consensus 240 ~G~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~- 301 (376)
T 3ezs_A 240 SGFIAGDS--------------RLLEKYKAFRAY-LGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK- 301 (376)
T ss_dssp CEEEEECH--------------HHHHHHHHHHTT-TCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST-
T ss_pred eEEEeeCH--------------HHHHHHHHHHhh-hcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc-
Confidence 89999877 555555443222 2235566666666667764 34568888899999999999887
Q ss_pred cCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcc-cCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHH
Q 010058 375 RGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLES-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAE 453 (519)
Q Consensus 375 ~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~ 453 (519)
|+. .+ ....+.++.+. +..++.+.|.+ +||.+......+. .....+++||++.. + ++|++++++
T Consensus 302 -~~~--~~-~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~-~~~~~~~iRis~~~--~----~~~i~~~l~ 366 (376)
T 3ezs_A 302 -NTL--IY-PYSFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGR-NRIGADYVRLALVY--D----TPLLEKPLE 366 (376)
T ss_dssp -TCC--CC-SBSSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCS-TTTTTTEEEEECCS--C----HHHHHHHHH
T ss_pred -CCC--CC-CcceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCeEEEEEcC--C----HHHHHHHHH
Confidence 654 22 33456666664 56777777766 8999974322221 12356899999763 5 799999999
Q ss_pred HHHHHHH
Q 010058 454 FFDAAVK 460 (519)
Q Consensus 454 ~l~~~l~ 460 (519)
.|.++++
T Consensus 367 ~l~~~l~ 373 (376)
T 3ezs_A 367 IIETYRE 373 (376)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9998874
No 106
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.93 E-value=9.1e-26 Score=229.86 Aligned_cols=325 Identities=16% Similarity=0.117 Sum_probs=213.1
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL 162 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al 162 (519)
+.+++++.|++++.+.+.+.+ .+| .....+++ +.+++++|++ ++.+++|++ |+..++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~-------~~~~~~l~----~~la~~~~~~------~v~~~~ggt~al~~~~~~~ 67 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ-------GKRSLLFE----EALCEFLGVK------HALVFNSATSALLTLYRNF 67 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS-------SHHHHHHH----HHHHHHHTCS------EEEEESCHHHHHHHHHHHS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC-------ChHHHHHH----HHHHHHhCCC------eEEEeCCHHHHHHHHHHHh
Confidence 466789999999999886522 111 23344444 8888999976 266666655 998899999
Q ss_pred ---cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccccccc
Q 010058 163 ---LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARL 239 (519)
Q Consensus 163 ---l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~ 239 (519)
++|||+|+++++.|.++..... ..|..+..+ +++++ +.+|++++++++++ ++++|+++.. +|..
T Consensus 68 ~~~~~~gd~Vl~~~~~~~~~~~~~~--------~~g~~~~~~--~~~~~-~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~ 134 (375)
T 2fnu_A 68 SEFSADRNEIITTPISFVATANMLL--------ESGYTPVFA--GIKND-GNIDELALEKLINE-RTKAIVSVDY-AGKS 134 (375)
T ss_dssp SCCCTTSCEEEECSSSCTHHHHHHH--------HTTCEEEEC--CBCTT-SSBCGGGSGGGCCT-TEEEEEEECG-GGCC
T ss_pred cccCCCCCEEEECCCccHhHHHHHH--------HCCCEEEEe--ccCCC-CCCCHHHHHhhcCc-CceEEEEeCC-cCCc
Confidence 8999999999988877654322 234444444 45543 47999999998876 8898877744 8999
Q ss_pred ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEee-cccccccccCcchhhhH
Q 010058 240 YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFR-KGVKEINKQGQEVMYAY 318 (519)
Q Consensus 240 ~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~-~~~~~~~~~g~~~~~~~ 318 (519)
.|+++|.++|+++|+++|+|++|..|....+.....++.+++.++|.||++ |+..|++++. ++ ++
T Consensus 135 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~-~~g~g~~~~~~~~-------------~~ 200 (375)
T 2fnu_A 135 VEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPI-TTAEGGAVVTNDS-------------EL 200 (375)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSS-CCSSCEEEEESCH-------------HH
T ss_pred cCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCc-cccCceEEEeCCH-------------HH
Confidence 999999999999999999999998776543311111113445566666998 4433766664 32 33
Q ss_pred HHHhhhcccCCC------------CCCc-cHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecC--
Q 010058 319 EDKINQAVFPGL------------QGGP-HNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSG-- 382 (519)
Q Consensus 319 ~~~i~~~~~~~~------------~g~~-~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-- 382 (519)
.+.+......+. .+.+ ....+.+ +.++... ..+++..++..++++++.+.|+++ |+.+..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 277 (375)
T 2fnu_A 201 HEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQS-ALGLSQL--KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLL 277 (375)
T ss_dssp HHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGC
T ss_pred HHHHHHHHhcCCccccccccccccccccCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Confidence 333322111110 1111 1112211 1222222 357788899999999999999998 7877654
Q ss_pred C--CCcceeeeeccCCCC-cHHHHHHhhcccCeEEcccccCCCCC-CC---------------CCCeEEeccCccccCCC
Q 010058 383 G--TENHLVLVNLRNKGI-DGSRVEKVLESVHIAANKNTVPGDVS-AM---------------VPGGIRMGTPALTSRGF 443 (519)
Q Consensus 383 ~--~~~~~~~v~~~~~~~-~~~~~~~~L~~~gI~v~~~~~p~~~~-~~---------------~~~~iRi~~~~~ttrg~ 443 (519)
+ ...+++++.+...+. +..++.+.|.+.||.++..+.|+... .. ..+.|||+++..++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t--- 354 (375)
T 2fnu_A 278 KDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLN--- 354 (375)
T ss_dssp SSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCC---
T ss_pred CCCcceEEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCC---
Confidence 1 122444555543334 57788888988999997332232210 00 12579999988878
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|+++++.
T Consensus 355 -~~~i~~~~~~l~~~~~~ 371 (375)
T 2fnu_A 355 -LESVQNIAHSVLKTFES 371 (375)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 89999999999998764
No 107
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.93 E-value=2e-24 Score=225.02 Aligned_cols=347 Identities=14% Similarity=0.063 Sum_probs=222.1
Q ss_pred CeeecCCCCCC-cHHHHHHHhhHhhhccC--CCCCC---CCCCCCchhHHHHHHHHHHHHHHHcC----CCCCCCcceEE
Q 010058 78 GLELIPSENFT-SVSVMQAVGSVMTNKYS--EGYPG---ARYYGGNEYIDMAESLCQKRALDAFQ----LDPAKWGVNVQ 147 (519)
Q Consensus 78 ~i~L~a~en~~-~~~V~ea~~~~l~~~~~--~g~p~---~~~y~~~~~~~~le~~~~~~~~~~~g----~~~~~~~~~V~ 147 (519)
.|+|..++|+. .+.+.+++.+....... +|..+ ...|+...+..++++.+.+++.+.+| +++ .+|+
T Consensus 40 ~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~----~~v~ 115 (435)
T 3piu_A 40 IIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP----NHLV 115 (435)
T ss_dssp BEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG----GGEE
T ss_pred eEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCH----HHEE
Confidence 47888888865 55666666554321100 01000 01234445557788776677766555 444 3588
Q ss_pred eCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--
Q 010058 148 SLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-- 224 (519)
Q Consensus 148 ~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-- 224 (519)
+++|++ |+..++.++++|||.|++.++.|.++..... ...|..+..+++..+ .++.+|++++++++++.
T Consensus 116 ~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-------~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~ 187 (435)
T 3piu_A 116 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLK-------WRTGVEIVPIHCTSS-NGFQITETALEEAYQEAEK 187 (435)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTT-------TTTCCEEEEEECCGG-GTSCCCHHHHHHHHHHHHH
T ss_pred EcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHH-------HhcCCEEEEeeCCCc-cCCcCCHHHHHHHHHHHHh
Confidence 888887 9999999999999999999988876643111 023554545544321 24678999999998763
Q ss_pred ---CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC--------------CCCeEE
Q 010058 225 ---RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF--------------EYADVV 282 (519)
Q Consensus 225 ---k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~--------------~~~di~ 282 (519)
++++|+++ ++| +|...+ +++|+++|++||+++|+|++|..+........... ....++
T Consensus 188 ~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~ 267 (435)
T 3piu_A 188 RNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHV 267 (435)
T ss_dssp TTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEE
T ss_pred cCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEE
Confidence 78888877 666 787665 57888889999999999999865433221111000 122388
Q ss_pred EEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc--CHhHHHHH
Q 010058 283 TTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK--TPEYKAYQ 358 (519)
Q Consensus 283 ~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~--~~~~~~~~ 358 (519)
+.|+||++ +|.|.|+++++++ ++.+.+...... ++.+....+++++++.... ....++..
T Consensus 268 i~s~sK~~g~~G~r~G~~~~~~~-------------~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 331 (435)
T 3piu_A 268 VYSLSKDLGLPGFRVGAIYSNDD-------------MVVAAATKMSSF---GLVSSQTQHLLSAMLSDKKLTKNYIAENH 331 (435)
T ss_dssp EEESSSSSCCGGGCEEEEEESCH-------------HHHHHHHHHGGG---SCCCHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EEeeecccCCCceeEEEEEeCCH-------------HHHHHHHHHhhc---CCCCHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 89999987 5777899999653 444444332221 2233444444444444221 12346677
Q ss_pred HHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCC-----cHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeE
Q 010058 359 EQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGI-----DGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGI 431 (519)
Q Consensus 359 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~i 431 (519)
+++.++++++.+.|.+.|+.++.+ ..+.+.++.+..... +..++.+.| +++||.++ |+.. .+..++.+
T Consensus 332 ~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~~~~~~~~i 406 (435)
T 3piu_A 332 KRLKQRQKKLVSGLQKSGISCLNG-NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNIS----PGSSCHCTEPGWF 406 (435)
T ss_dssp HHHHHHHHHHHHHHHTTTCEECCC-CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECE----EGGGGTCSSTTEE
T ss_pred HHHHHHHHHHHHHHHhcCCcccCC-CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEe----CCcccCCCCCCEE
Confidence 888999999999999999887654 234566777643110 234555555 45699997 3332 23346789
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
||++... + +++++++++.|.++++..
T Consensus 407 Ri~~~~~-~----~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 407 RVCFANL-P----ERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp EEECSSS-C----HHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCC-C----HHHHHHHHHHHHHHHHHH
Confidence 9998655 6 799999999999988643
No 108
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=3.7e-25 Score=229.89 Aligned_cols=342 Identities=16% Similarity=0.086 Sum_probs=228.4
Q ss_pred cccCeeecCCCC----CCcHHHHHHHhhHhhhcc--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC---CCCCCCcce
Q 010058 75 QWKGLELIPSEN----FTSVSVMQAVGSVMTNKY--SEGYPGARYYGGNEYIDMAESLCQKRALDAFQ---LDPAKWGVN 145 (519)
Q Consensus 75 ~~~~i~L~a~en----~~~~~V~ea~~~~l~~~~--~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g---~~~~~~~~~ 145 (519)
..+.|+|..+.+ ++++.+.+++.+.+.... ..+| +...+..++++.+.+++.+.+| +++ .+
T Consensus 42 ~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y------~~~~g~~~lr~~la~~l~~~~g~~~~~~----~~ 111 (425)
T 1vp4_A 42 DKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQY------STTEGDPVLKQQILKLLERMYGITGLDE----DN 111 (425)
T ss_dssp STTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSC------CCTTCCHHHHHHHHHHHHHHHCCCSCCG----GG
T ss_pred CCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCC------CCCCCCHHHHHHHHHHHHhccCCCCCCc----cc
Confidence 345688876543 257889999988876410 0123 2223456777777777777778 444 36
Q ss_pred EEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-
Q 010058 146 VQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL- 223 (519)
Q Consensus 146 V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~- 223 (519)
|.+++|++ ++..++.++++|||+|++.++.|.++.. .+...|..+..++ .+++ + +|++++++++++
T Consensus 112 v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~-~-~d~~~l~~~l~~~ 179 (425)
T 1vp4_A 112 LIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAIN--------AFRQYLANFVVVP--LEDD-G-MDLNVLERKLSEF 179 (425)
T ss_dssp EEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTTCEEEEEE--EETT-E-ECHHHHHHHHHHH
T ss_pred EEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCCEEEEec--cCCC-C-CCHHHHHHHHHhh
Confidence 99999988 8888999999999999999977766543 1223354444554 3432 3 899999998875
Q ss_pred ------hCCcEEE-Ec-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC-----CCCeEEEEcC
Q 010058 224 ------FRPKLIV-AG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF-----EYADVVTTTT 286 (519)
Q Consensus 224 ------~k~klIi-~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~-----~~~di~~~S~ 286 (519)
.++++|+ ++ ++| +|...+ +++|.++|+++|+++|+|++|...... +....++ ...++++.|+
T Consensus 180 ~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-g~~~~~~~~~~~~~~~i~~~s~ 258 (425)
T 1vp4_A 180 DKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYE-GETVDPIFKIGGPERVVLLNTF 258 (425)
T ss_dssp HHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCS-SCCCCCHHHHHCTTTEEEEEES
T ss_pred hhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCC-CCCCcCHHHhCCCCCEEEEecc
Confidence 3788874 55 556 787765 568889999999999999998653321 1111111 1357889999
Q ss_pred CCccc-CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc-CHhHHHHHHHHHHH
Q 010058 287 HKSLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK-TPEYKAYQEQVLSN 364 (519)
Q Consensus 287 ~K~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~-~~~~~~~~~~~~~~ 364 (519)
+|+++ |.|.|++++++ ++.+.+.....+.. .+++....+++..+++... ...+++..+++.++
T Consensus 259 sK~~~~G~r~G~~~~~~--------------~~~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (425)
T 1vp4_A 259 SKVLAPGLRIGMVAGSK--------------EFIRKIVQAKQSAD-LCSPAITHRLAARYLERYDLLEQLKPTIELYRRK 323 (425)
T ss_dssp TTTTCGGGCEEEEECCH--------------HHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHH
T ss_pred ccccccccceEEEeeCH--------------HHHHHHHHHhhhhc-CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99985 56679999987 45444433211111 2335555556666666531 12347778888999
Q ss_pred HHHHHHHHHhc-----CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccc
Q 010058 365 SSKFARSLLER-----GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALT 439 (519)
Q Consensus 365 ~~~l~~~L~~~-----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~t 439 (519)
++.+.+.|++. |+.++.+ ....++++.+.. +.+..++.+.|.+.||.+......+. .....+++||++...
T Consensus 324 ~~~l~~~L~~~~~~~~g~~~~~~-~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~f~~-~~~~~~~iRis~~~~- 399 (425)
T 1vp4_A 324 RTVMLNALEEYFSDIPGVKWVKS-EGGLFIWLTLPE-GFDTWEMFEYAKRKKVFYVPGRVFKV-YDEPSPSMRLSFCLP- 399 (425)
T ss_dssp HHHHHHHHHHHSTTSTTCEECCC-SBSSEEEEECCT-TCCTTTTHHHHHHHTEECEEGGGGCT-TCCCCSEEEEECSSS-
T ss_pred HHHHHHHHHHhCCCCCceEEecC-CccEEEEEEcCC-CCCHHHHHHHHHHCCCEEECchhhcC-CCCCCCeEEEEeCCC-
Confidence 99999999886 6877644 234566777643 44566777777777999974321111 112357899998764
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 010058 440 SRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 440 trg~~~~di~~l~~~l~~~l~~~ 462 (519)
+ ++|++++++.|.++++..
T Consensus 400 ~----~e~i~~~l~~l~~~l~~~ 418 (425)
T 1vp4_A 400 P----DEKIVEGIKRLREVVLEY 418 (425)
T ss_dssp C----HHHHHHHHHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHHHHHHH
Confidence 5 799999999999988643
No 109
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.93 E-value=9.8e-26 Score=228.42 Aligned_cols=337 Identities=12% Similarity=0.105 Sum_probs=223.2
Q ss_pred cCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCC---chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH-
Q 010058 77 KGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGG---NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS- 152 (519)
Q Consensus 77 ~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~---~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs- 152 (519)
..+.+.+++.++|+.|++++.+.+.+ + ..++...|.. ......+.+.+++++++++|++.. .+|.+++|+
T Consensus 3 ~~~~~~~g~~~~p~~v~~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---~~v~~~~g~g 76 (360)
T 1w23_A 3 QVFNFNAGPSALPKPALERAQKELLN-F--NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPND---YQILFLQGGA 76 (360)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSS-S--TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred ceEeecCCCcCCCHHHHHHHHHHhhh-h--ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC---ceEEEECCcc
Confidence 35788888888999999999988764 2 2233222211 233444556677999999999632 268899887
Q ss_pred H-HHHHHHHhhcCC---CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHH-HhhhhCCc
Q 010058 153 P-ANFQVYTALLKP---HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEK-SAALFRPK 227 (519)
Q Consensus 153 ~-a~~~~~~all~p---GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~-~i~~~k~k 227 (519)
+ |+.+++.+++.+ ||.|++..++|.+. . .+...| .+..++ ++++++.+|++++++ ++++ +||
T Consensus 77 t~al~~~~~~l~~~~~~g~~vi~~~~~~~~~----~-----~~~~~g-~~~~v~--~~~~~~~~d~~~l~~~~i~~-~~k 143 (360)
T 1w23_A 77 SLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL----K-----EAKLLG-ETHIAA--STKANSYQSIPDFSEFQLNE-NDA 143 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHHHHHHH----H-----HHHTTS-EEEEEE--ECGGGTSCSCCCGGGCCCCT-TEE
T ss_pred hHHHHHHHHHhcCCCCcccEEEecchhHHHH----H-----HHHHhC-CeEEee--cccccCcCCccchHhhccCC-CCC
Confidence 6 888888898866 55566544333221 0 112235 555554 443345689999988 7765 899
Q ss_pred EEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeeccc
Q 010058 228 LIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGV 304 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~ 304 (519)
+|+++ ++| +|...+ +|++++|+++|+|++|..|....++ ...|++++|+||+++ |.| |+++++++.
T Consensus 144 ~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~~~-----~~~di~~~s~sK~~~-~~G~G~~~~~~~~ 212 (360)
T 1w23_A 144 YLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPLKV-----NQFGMIYAGAQKNLG-PSGVTVVIVKKDL 212 (360)
T ss_dssp EEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCCCG-----GGCSEEEEETTTTTS-CTTCEEEEEEHHH
T ss_pred EEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCcCc-----ccCCEEEEEcccccC-CCCcEEEEEcHHH
Confidence 99988 566 787766 4455899999999999876543322 233899999999885 556 999998743
Q ss_pred c--cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHhcC-C-EE
Q 010058 305 K--EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKAYQEQVLSNSSKFARSLLERG-Y-DL 379 (519)
Q Consensus 305 ~--~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~-~~ 379 (519)
. +.+..+... ...... . .....++++...++++..+++.+... ++++..++++++++++.+.|++.+ + ..
T Consensus 213 ~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 287 (360)
T 1w23_A 213 LNTKVEQVPTML--QYATHI-K--SDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVG 287 (360)
T ss_dssp HCSCCTTCCGGG--CHHHHH-H--TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEE
T ss_pred HhhcccCCcchh--hhhhhh-h--ccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccc
Confidence 1 111111000 000000 0 11223677888888888888876543 578889999999999999999885 5 54
Q ss_pred ec-CC-CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 380 VS-GG-TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 380 ~~-~~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
.. +. ..++++++.+.. +.+..++.+.|.+.||.+. |+.. .+++||++++..++ ++|++++++.|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~----~~~~---~~~~iRis~~~~~~----~~~i~~~~~~l~~ 355 (360)
T 1w23_A 288 HAEKGSRSLMNVTFNLRN-EELNQQFLAKAKEQGFVGL----NGHR---SVGGCRASIYNAVP----IDACIALRELMIQ 355 (360)
T ss_dssp SSCGGGBCSSEEEEECSS-HHHHHHHHHHHHHTTEESC----BCCT---TTCSEEEECCTTSC----HHHHHHHHHHHHH
T ss_pred cCCchhccCcEEEEEcCC-CccHHHHHHHHHHCCeeee----cCCC---CCCeEEEEecCCCC----HHHHHHHHHHHHH
Confidence 31 21 123356665532 1234567777888999985 4432 24689999998777 8999999999998
Q ss_pred HHH
Q 010058 458 AVK 460 (519)
Q Consensus 458 ~l~ 460 (519)
+++
T Consensus 356 ~~~ 358 (360)
T 1w23_A 356 FKE 358 (360)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
No 110
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.93 E-value=5.3e-25 Score=221.96 Aligned_cols=325 Identities=18% Similarity=0.202 Sum_probs=208.5
Q ss_pred cCeeecCCCCC-CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHH
Q 010058 77 KGLELIPSENF-TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPAN 155 (519)
Q Consensus 77 ~~i~L~a~en~-~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~ 155 (519)
+.|+|..++++ +++.+++++.+.+.. ...|+......+++ +++++++|.+. .+++++|+.++
T Consensus 4 ~~i~~~~~~~~~p~~~~~~a~~~~~~~--------~~~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~ 66 (347)
T 1jg8_A 4 MMIDLRSDTVTKPTEEMRKAMAQAEVG--------DDVYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGN 66 (347)
T ss_dssp -CEECSCGGGCCCCHHHHHHHHTCCCC--------CGGGTCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHH
T ss_pred eEEEeccccCCCCCHHHHHHHhcCCCC--------CcccCCChHHHHHH----HHHHHHhCCce-----EEEecCcHHHH
Confidence 34788777774 568888888654321 11233445566666 78888899863 47778888788
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CCcEEE
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF-----RPKLIV 230 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~klIi 230 (519)
..++.++++|||+|+++++.|.+.+.... .+...|..+..+ .+ +++.+|++++++++++. ++++|+
T Consensus 67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~v---~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~ 137 (347)
T 1jg8_A 67 QVSIMAHTQRGDEVILEADSHIFWYEVGA-----MAVLSGVMPHPV---PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIA 137 (347)
T ss_dssp HHHHHHHCCTTCEEEEETTCHHHHSSTTH-----HHHHTCCEEEEE---CE-ETTEECHHHHHHHSCCSCTTSCCEEEEE
T ss_pred HHHHHHhcCCCCEEEEcCcchhhhccccc-----hhhccCeEEEEe---cC-CCCccCHHHHHHHhccccccccCceEEE
Confidence 88889999999999999977755432110 112234444333 12 35678999999998752 688998
Q ss_pred Ec-ccc-c-ccccc---HHHHHHHHhhcCCEEEehhhhhhhcc-ccCCCCCCC-CCCeEEEEcCCCcccCCCcceEEeec
Q 010058 231 AG-ASA-Y-ARLYD---YARIRKVCDKQKAVMLADMAHISGLV-AAGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRK 302 (519)
Q Consensus 231 ~~-~sn-~-g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~-~~~~~~~p~-~~~di~~~S~~K~l~GprgG~i~~~~ 302 (519)
++ ++| + |...+ +++|.++|+++|+++++|++|..+.. ..+....++ .++|.+++|+||++++|.||+++.++
T Consensus 138 ~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 217 (347)
T 1jg8_A 138 IENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR 217 (347)
T ss_dssp EESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH
T ss_pred EeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH
Confidence 87 565 6 87665 57888999999999999999865422 112211111 15788888999999887666666665
Q ss_pred ccccccccCcchhhhHHHHhhhc--ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEe
Q 010058 303 GVKEINKQGQEVMYAYEDKINQA--VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLV 380 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 380 (519)
++.+++... .+.+.. .......++...+++.... . .++..++++.+.+.|++.|+.+.
T Consensus 218 --------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~----~~~~~~~~~~l~~~L~~~~~~~~ 277 (347)
T 1jg8_A 218 --------------DFIERARKARKMLGGGM-RQAGVLAAAGIIALTKMVD-R----LKEDHENARFLALKLKEIGYSVN 277 (347)
T ss_dssp --------------HHHHHHHHHHHHHTCCC-SSTHHHHHHHHHHHHHSST-T----HHHHHHHHHHHHHHHHHHTCBCC
T ss_pred --------------HHHHHHHHHHHHcCCch-hHHHHHHHHHHHHHHHHHH-H----HHHHHHHHHHHHHHHHhcCceec
Confidence 333333211 111111 1111111222234544221 1 23344677888899988777653
Q ss_pred cCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 381 SGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 381 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
......+++++.+...+.+..++.+.|.+.||.++ |+. .+.+|++++..++ ++|++++++.|.++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~----~~~-----~~~iRl~~~~~~~----~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 278 PEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLAN----AVS-----DTEIRLVTHKDVS----RNDIEEALNIFEKLFR 344 (347)
T ss_dssp GGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEECE----EEE-----TTEEEEECCTTSC----HHHHHHHHHHHHHHHH
T ss_pred cCCCcceEEEEEcccccCCHHHHHHHHHHCCCEEe----cCC-----CCeEEEEeCCCCC----HHHHHHHHHHHHHHHH
Confidence 22233456666664324567888888888999986 321 3679999877667 8999999999998875
No 111
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.93 E-value=1.8e-24 Score=225.78 Aligned_cols=357 Identities=10% Similarity=0.001 Sum_probs=224.1
Q ss_pred ccCe-eecCCCCCCcHHHHHHHhhHhhhccCC---CC--CC----CCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcce
Q 010058 76 WKGL-ELIPSENFTSVSVMQAVGSVMTNKYSE---GY--PG----ARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVN 145 (519)
Q Consensus 76 ~~~i-~L~a~en~~~~~V~ea~~~~l~~~~~~---g~--p~----~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~ 145 (519)
.+.| +|..+.+..++.+.+++.+.+...+.. |. +. ...|+...+..++++.+.+++.+.+|...+. .+
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~--~~ 108 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTS--EN 108 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG--GG
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCH--HH
Confidence 5678 898887777766666666555442211 00 11 1124444556788877778887777764222 36
Q ss_pred EEeCCcHH-HHHHHHHhhcCCCC--------------EEEEe-cCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-
Q 010058 146 VQSLSGSP-ANFQVYTALLKPHE--------------RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES- 208 (519)
Q Consensus 146 V~~~sGs~-a~~~~~~all~pGD--------------~Vl~~-~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~- 208 (519)
|++|+|++ |+..++.++++||| +|+++ ++++.++....... -.+.+..+..++++++++
T Consensus 109 i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 184 (444)
T 3if2_A 109 IALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEG----QHFAAVLPHIDEVTHDGEE 184 (444)
T ss_dssp EEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSS----CCEEECCCEEEEEEETTEE
T ss_pred EEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccccc----chhhccCceEEeccccccc
Confidence 99999988 88889999999998 78875 66666664321100 012233344445555532
Q ss_pred ---CCCCCHHHHHHH---hhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhcc---ccCCCCC
Q 010058 209 ---TGYIDYEQLEKS---AALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLV---AAGVIPS 274 (519)
Q Consensus 209 ---~~~iD~d~l~~~---i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~---~~~~~~~ 274 (519)
++.+|+++|+++ +.+ ++++|+++ ++| +|...+ +++|.++|++||+++|+|++|..+.. ..+..+
T Consensus 185 g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~- 262 (444)
T 3if2_A 185 GFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHL- 262 (444)
T ss_dssp EEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCC-
T ss_pred CccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccc-
Confidence 247999999987 454 78998887 777 888888 78888999999999999999864221 111111
Q ss_pred CCCCCeEEEEcCCCcc-cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-
Q 010058 275 PFEYADVVTTTTHKSL-RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP- 352 (519)
Q Consensus 275 p~~~~di~~~S~~K~l-~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~- 352 (519)
.....+++++|+||++ +|.|.|++++++ ++.+.+......... +++....+++...+......
T Consensus 263 ~~~~~~i~~~S~sK~~~~G~r~G~~~~~~--------------~l~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~ 327 (444)
T 3if2_A 263 NWDNNTILCFSLSKIGLPGMRTGIIVADA--------------KVIEAVSAMNAVVNL-APTRFGAAIATPLVANDRIKQ 327 (444)
T ss_dssp CCCTTEEEEEESTTTTCGGGCCEEEECCH--------------HHHHHHHHHHHHHHS-SCCCHHHHHHHHHHHTSHHHH
T ss_pred cCCCCEEEEechhhccCCCCceEEEEECH--------------HHHHHHHHHHHhccC-CCChHHHHHHHHHHHcCchhH
Confidence 1125689999999974 567779999877 444443322111111 12223333333344321111
Q ss_pred hHHH-HHHHHHHHHHHHHHHHHhc----CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccC--CCCC-
Q 010058 353 EYKA-YQEQVLSNSSKFARSLLER----GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVP--GDVS- 424 (519)
Q Consensus 353 ~~~~-~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p--~~~~- 424 (519)
...+ ..+++.++++.+.+.|.+. ++.+..+ ....++++.+...+++..++.+.|.++||.++..... +...
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~ 406 (444)
T 3if2_A 328 LSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKP-EGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVS 406 (444)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECC-CBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecC-CccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCc
Confidence 1122 4556777888888887763 4555543 3345667776544567888999998999999743211 1110
Q ss_pred --CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 425 --AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 425 --~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+...++|||+++. + +++++++++.|.++++..
T Consensus 407 ~~~~~~~~iRis~~~--~----~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 407 DYQHAHECIRMSIAA--D----EQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp TCSGGGSEEEEESSS--C----HHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCeEEEEEeC--C----HHHHHHHHHHHHHHHHHH
Confidence 1124689999886 5 799999999999988754
No 112
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.93 E-value=2.2e-24 Score=221.77 Aligned_cols=323 Identities=14% Similarity=0.122 Sum_probs=213.9
Q ss_pred CCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-
Q 010058 85 ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL- 162 (519)
Q Consensus 85 en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al- 162 (519)
.+.+++++++++.+.+.+.| ... ......+++ +.+++++|.+ +|++++|++ |+..++.++
T Consensus 7 ~p~~~~~v~~a~~~~~~~~~----~~~----~g~~~~~l~----~~la~~~~~~------~v~~~~ggt~al~~~~~~l~ 68 (394)
T 1o69_A 7 PPHMGGNELKYIEEVFKSNY----IAP----LGEFVNRFE----QSVKDYSKSE------NALALNSATAALHLALRVAG 68 (394)
T ss_dssp -----CCHHHHHHHHHHHTT----TSC----TTHHHHHHH----HHHHHHHCCS------EEEEESCHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHcCC----ccC----CChHHHHHH----HHHHHHhCCC------cEEEeCCHHHHHHHHHHHcC
Confidence 34567889999998887633 110 113345555 7888888874 366666666 888899999
Q ss_pred cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEccccccccc
Q 010058 163 LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAGASAYARLY 240 (519)
Q Consensus 163 l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~~sn~g~~~ 240 (519)
++|||+|+++++.|.++.... ...|..+..++ ++ +++.+|++++++++++. ++++|++++ .+|...
T Consensus 69 ~~~gd~Vl~~~~~~~~~~~~~--------~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~ 136 (394)
T 1o69_A 69 VKQDDIVLASSFTFIASVAPI--------CYLKAKPVFID--CD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAA 136 (394)
T ss_dssp CCTTCEEEEESSSCGGGTHHH--------HHTTCEEEEEC--BC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCC
T ss_pred CCCCCEEEECCCccHHHHHHH--------HHcCCEEEEEE--eC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChh
Confidence 999999999998888775432 23354444444 44 56889999999998864 689998874 478889
Q ss_pred cHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHH
Q 010058 241 DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYED 320 (519)
Q Consensus 241 d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~ 320 (519)
++++|.++|+++|+++|+|++|..|....+.....+..+|+.++|.||.++|+++|+++++++ ++.+
T Consensus 137 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~-------------~l~~ 203 (394)
T 1o69_A 137 KMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNK-------------EKIE 203 (394)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-------------HHHH
T ss_pred hHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCH-------------HHHH
Confidence 999999999999999999999987776544322223368899999999998888899999642 3333
Q ss_pred HhhhcccCC------CC--------CCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCC--
Q 010058 321 KINQAVFPG------LQ--------GGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGT-- 384 (519)
Q Consensus 321 ~i~~~~~~~------~~--------g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-- 384 (519)
.+......+ .+ ++++.....++. .+. .+++..++.+++++++.+.|.+. +.+..+..
T Consensus 204 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~----~l~--~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~ 276 (394)
T 1o69_A 204 KARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVA----QME--VLEQRVLKKREIYEWYKEFLGEY-FSFLDELENS 276 (394)
T ss_dssp HHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHH----HHT--THHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTE
T ss_pred HHHHHHHhccccCccccccccCcccCcCHHHHHHHHH----HHH--HHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCC
Confidence 332211111 00 123333333222 221 36678889999999999999987 65544321
Q ss_pred -Cc-ceeeeeccCC--------------------CCcHHHHHHhhcccCeEEcccccCCCCCC-CC--------------
Q 010058 385 -EN-HLVLVNLRNK--------------------GIDGSRVEKVLESVHIAANKNTVPGDVSA-MV-------------- 427 (519)
Q Consensus 385 -~~-~~~~v~~~~~--------------------~~~~~~~~~~L~~~gI~v~~~~~p~~~~~-~~-------------- 427 (519)
.+ +++++.+... +++..++.+.|.+.||.++....|....+ ..
T Consensus 277 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 356 (394)
T 1o69_A 277 RSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFF 356 (394)
T ss_dssp ECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHH
T ss_pred cceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHh
Confidence 12 2344554321 23567788899889999985432211111 00
Q ss_pred CCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 428 PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 428 ~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
..++|+.++..+| ++|+++++++|++++..
T Consensus 357 ~~~~~~~~~~~~t----~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 357 QKGICLPSGTAMS----KDDVYEISKLILKSIKA 386 (394)
T ss_dssp HHEEEECCCTTCC----HHHHHHHHHHHHHHHC-
T ss_pred cCeEEccCCCCCC----HHHHHHHHHHHHHHHhc
Confidence 0346666666666 99999999999988753
No 113
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.93 E-value=1.2e-24 Score=223.19 Aligned_cols=328 Identities=14% Similarity=0.134 Sum_probs=219.1
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQ 157 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~ 157 (519)
.|+|.. +..++.+++++.+.+.+.+ + .......+++ +.+++++|.+. .+++++|+.|+..
T Consensus 10 ~i~~~~--p~~~~~~~~a~~~~~~~~~--------~-~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~al~~ 69 (393)
T 1mdo_A 10 FLPFSR--PAMGAEELAAVKTVLDSGW--------I-TTGPKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHI 69 (393)
T ss_dssp CBCSCC--CCCCHHHHHHHHHHHHHTC--------C-SSSHHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHH
T ss_pred ccccCC--CCCCHHHHHHHHHHHhcCC--------c-CCChHHHHHH----HHHHHHhCCCc-----EEEecChHHHHHH
Confidence 456643 4467889999998887631 1 1224555555 78888888753 2445555559998
Q ss_pred HHHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccc
Q 010058 158 VYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAY 236 (519)
Q Consensus 158 ~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~ 236 (519)
++.++ ++|||+|++++++|.++... +...|..+..+ +++++++.+|++++++++++ ++++|++++ .+
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~v--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~-~~ 137 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLNM--------IVLLGANPVMV--DVDRDTLMVTPEHIEAAITP-QTKAIIPVH-YA 137 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHHH--------HHHTTCEEEEE--CBCTTTCCBCHHHHHHHCCT-TEEEECCBC-GG
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHHH--------HHHCCCEEEEE--eccCCcCCCCHHHHHHhcCC-CceEEEEeC-CC
Confidence 99999 99999999999888776532 22335444444 45555678999999999986 889888763 47
Q ss_pred cccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCC-CeEEEEcCC--CcccCCCcceEEeecccccccccCcc
Q 010058 237 ARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEY-ADVVTTTTH--KSLRGPRGAMIFFRKGVKEINKQGQE 313 (519)
Q Consensus 237 g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~-~di~~~S~~--K~l~GprgG~i~~~~~~~~~~~~g~~ 313 (519)
|...|+++|.++|+++|+++|+|++|..|....+. +. + .|++++|+| |+++|+++|+++++++
T Consensus 138 G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~~---~~~d~~~~S~~k~K~l~~~~~g~~~~~~~---------- 203 (393)
T 1mdo_A 138 GAPADLDAIYALGERYGIPVIEDAAHATGTSYKGR-HI---GARGTAIFSFHAIKNITCAEGGIVVTDNP---------- 203 (393)
T ss_dssp GCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE-ET---TSSSEEEEECCTTSSSCSSSCEEEEESCH----------
T ss_pred CCcCCHHHHHHHHHHcCCeEEEECccccCCeECCe-ec---CCCCeEEEeCCCCCccccccceEEEeCCH----------
Confidence 88899999999999999999999999877654322 12 2 799999988 9999889999999742
Q ss_pred hhhhHHHHhhhccc---------------CC-----CCCC-ccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH
Q 010058 314 VMYAYEDKINQAVF---------------PG-----LQGG-PHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSL 372 (519)
Q Consensus 314 ~~~~~~~~i~~~~~---------------~~-----~~g~-~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 372 (519)
++.+.+..... +. ..|+ .....+.+ +.++..+ ..+++..++.+++++++.+.|
T Consensus 204 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-a~~~~~l--~~~~~~~~~~~~~~~~l~~~L 277 (393)
T 1mdo_A 204 ---QFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNA-AIALAQL--QKLDALNARRAAIAAQYHQAM 277 (393)
T ss_dssp ---HHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHH-HHHHHHH--HTHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 22222211100 00 0111 11111211 1122222 236677788888999999999
Q ss_pred HhcCCEEecCC-----CCcceeeeeccCC--CCcHHHHHHhhcccCeEEcccccCCC------------CCCC----CCC
Q 010058 373 LERGYDLVSGG-----TENHLVLVNLRNK--GIDGSRVEKVLESVHIAANKNTVPGD------------VSAM----VPG 429 (519)
Q Consensus 373 ~~~g~~~~~~~-----~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~~~~p~~------------~~~~----~~~ 429 (519)
.+.++.+.... ...+++++.+... +.+..++.+.|.+.||.++....|.. .-+. ...
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (393)
T 1mdo_A 278 ADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSER 357 (393)
T ss_dssp HTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTT
T ss_pred hcCCcccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhC
Confidence 99887664321 2234566665421 45678899999899999974332210 0000 134
Q ss_pred eEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 430 GIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 430 ~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.||++++..++ ++|++++++.|++++..
T Consensus 358 ~lRi~~~~~~t----~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 358 ICSLPLFPDMT----ESDFDRVITALHQIAGQ 385 (393)
T ss_dssp EEEECCCTTCC----HHHHHHHHHHHHHHHC-
T ss_pred EEEecCCCCCC----HHHHHHHHHHHHHHHhc
Confidence 79999888777 89999999999998764
No 114
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.93 E-value=7.5e-26 Score=230.40 Aligned_cols=321 Identities=14% Similarity=0.131 Sum_probs=214.9
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQV 158 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~ 158 (519)
+++..+.+++++++.+++.+.+...+ |.......+++ +.+++++|.+. .+.++||+.|+..+
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~~~~~sGt~al~~a 66 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHGQ---------YILGPEVTELE----DRLADFVGAKY-----CISCANGTDALQIV 66 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHCC---------CSSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred ccccccccccCHHHHHHHHHHHhcCC---------ccCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHH
Confidence 44444555567889999988887621 22335556666 88888999873 37777777799989
Q ss_pred HHhh-cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-c
Q 010058 159 YTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-Y 236 (519)
Q Consensus 159 ~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~ 236 (519)
+.++ ++|||+|++++++|.++... +...|..+.. ++++++++.+|++++++++++ ++++|+ ++| +
T Consensus 67 l~~~~~~~gd~Vi~~~~~~~~~~~~--------~~~~G~~~~~--~~~~~~~~~~d~~~l~~~i~~-~~~~v~--~~~~~ 133 (367)
T 3nyt_A 67 QMALGVGPGDEVITPGFTYVATAET--------VALLGAKPVY--VDIDPRTYNLDPQLLEAAITP-RTKAII--PVSLY 133 (367)
T ss_dssp HHHTTCCTTCEEEEESSSCTHHHHH--------HHHTTCEEEE--ECBCTTTCSBCGGGTGGGCCT-TEEEEC--CBCGG
T ss_pred HHHhCCCCcCEEEECCCccHHHHHH--------HHHcCCEEEE--EecCCccCCcCHHHHHHhcCc-CCcEEE--eeCCc
Confidence 9999 99999999999888776542 2233444444 456666789999999999976 888887 344 7
Q ss_pred cccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcC--CCcccC-CCcceEEeecccccccccCcc
Q 010058 237 ARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRG-PRGAMIFFRKGVKEINKQGQE 313 (519)
Q Consensus 237 g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~--~K~l~G-prgG~i~~~~~~~~~~~~g~~ 313 (519)
|...|+++|.++|+++|+++|+|++|+.|....+..... ..|++++|+ ||++++ +.||+++++++
T Consensus 134 G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~Sf~~~K~l~~~g~gg~~~~~~~---------- 201 (367)
T 3nyt_A 134 GQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCN--LSTVACTSFFPSAPLGCYGDGGAIFTNDD---------- 201 (367)
T ss_dssp GCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTS--SSSEEEEECCTTSSSCCSSCCEEEEESCH----------
T ss_pred cChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccC--CCCEEEEECCCCCcCCCcCceeEEEeCCH----------
Confidence 999999999999999999999999998877644332221 228888884 899977 45789988653
Q ss_pred hhhhHHHHhhhcccC-----------CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 314 VMYAYEDKINQAVFP-----------GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 314 ~~~~~~~~i~~~~~~-----------~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
++.+.+...... +.....+....++ ++..+ ..+++..++.+++++++.+.|.+.|+.+...
T Consensus 202 ---~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~---~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 273 (367)
T 3nyt_A 202 ---ELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAI---LLPKL--EIFEEEIALRQKVAAEYDLSLKQVGIGTPFI 273 (367)
T ss_dssp ---HHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHH---HHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred ---HHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHH---HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCeeccCC
Confidence 343333221111 1111222222222 22222 2356778888999999999999987655432
Q ss_pred CCC----cceeeeeccCCCCcHHHHHHhhcccCeEEccccc-CCCC-CCC-------------CCCeEEeccCccccCCC
Q 010058 383 GTE----NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTV-PGDV-SAM-------------VPGGIRMGTPALTSRGF 443 (519)
Q Consensus 383 ~~~----~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~-p~~~-~~~-------------~~~~iRi~~~~~ttrg~ 443 (519)
... .+.+.+.+. +.+++.+.|.+.||.++..+. |... ... ....||++++..+|
T Consensus 274 ~~~~~~~~~~~~~~~~----~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t--- 346 (367)
T 3nyt_A 274 EVNNISVYAQYTVRMD----NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLD--- 346 (367)
T ss_dssp CTTEECCCSSEEEECS----SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCC---
T ss_pred CCCCceeeEEEEEEeC----CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCC---
Confidence 211 122222221 577899999999999875432 2221 111 13468998887777
Q ss_pred CHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAA 458 (519)
Q Consensus 444 ~~~di~~l~~~l~~~ 458 (519)
++|++++++.|++.
T Consensus 347 -~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 347 -TASIKIICAALTNL 360 (367)
T ss_dssp -HHHHHHHHHHHHC-
T ss_pred -HHHHHHHHHHHHHH
Confidence 99999999998754
No 115
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.93 E-value=2.9e-24 Score=222.44 Aligned_cols=329 Identities=11% Similarity=0.107 Sum_probs=215.9
Q ss_pred cCeeecCCC-------CCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeC
Q 010058 77 KGLELIPSE-------NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSL 149 (519)
Q Consensus 77 ~~i~L~a~e-------n~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~ 149 (519)
+.|+|..++ .++++.|.+++.+...... .+| +...+..++++.+.+++....+.+.. .+|+++
T Consensus 39 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~~g~~~lr~~ia~~~~~~~~~~~~---~~i~~t 108 (418)
T 3rq1_A 39 NVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VGY------APIAGIPDFLCAAEKECFGNFRPEGH---IRSIAT 108 (418)
T ss_dssp GCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HSC------CCTTCCHHHHHHHHHHHHGGGCCSSE---EEEEEE
T ss_pred CeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CCC------CCCCChHHHHHHHHHHHhcccCcccc---ccEEEC
Confidence 568888774 2468899999877554211 123 22234567776766777666665421 369999
Q ss_pred CcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh---C
Q 010058 150 SGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF---R 225 (519)
Q Consensus 150 sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~---k 225 (519)
+|++ |+..++.++++|||+|+++++.|.++.. .+...|..+..++ ++++++.+|++++++++++. +
T Consensus 109 ~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~~~~~~ 178 (418)
T 3rq1_A 109 AGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV--------ICSDTGRTLVTYS--LFDEHNNFNHEAFQNRVNELAAKQ 178 (418)
T ss_dssp SHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC--SBCTTSSBCHHHHHHHHHHHHHHC
T ss_pred CchHHHHHHHHHHhcCCCCEEEECCCCchhHHH--------HHHHcCCEEEEEe--eeCCCCCcCHHHHHHHHHHhhccC
Confidence 9988 8888999999999999999977766543 2333455555554 44445789999999998753 6
Q ss_pred Cc-EEEEc-c-cc-ccccccHHHHH---HHHh------hcCCEEEehhhhhhhccccC--------CCCCCCC-C-CeEE
Q 010058 226 PK-LIVAG-A-SA-YARLYDYARIR---KVCD------KQKAVMLADMAHISGLVAAG--------VIPSPFE-Y-ADVV 282 (519)
Q Consensus 226 ~k-lIi~~-~-sn-~g~~~d~~~i~---~ia~------~~~~~livD~ah~~g~~~~~--------~~~~p~~-~-~di~ 282 (519)
++ +|+++ + +| +|...+.+++. ++|+ ++|+++|+|++|. ++...+ ..+. +. . ..++
T Consensus 179 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~-~~~~~~~i~ 256 (418)
T 3rq1_A 179 TNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYL-DYSGEKDEVRAFFNKFSH-LPKEILTCV 256 (418)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTG-GGSSCHHHHHGGGGGGTT-CCTTEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccc-cccCChHHHHHHHHHHHh-cCCCceEEE
Confidence 76 67776 6 66 88888766555 5555 8999999999974 222211 0010 00 1 1377
Q ss_pred EEcCCCcc--cCCCcceEEe---ecccccccccCcchhhhHHHHhhhcc---cCCCCCCccHHHHHHHHHHHHHhc----
Q 010058 283 TTTTHKSL--RGPRGAMIFF---RKGVKEINKQGQEVMYAYEDKINQAV---FPGLQGGPHNHTISGLAVALKQVK---- 350 (519)
Q Consensus 283 ~~S~~K~l--~GprgG~i~~---~~~~~~~~~~g~~~~~~~~~~i~~~~---~~~~~g~~~~~~iaal~~al~~~~---- 350 (519)
+.|+||++ +|+|.|++++ ++ ++.+.+.... ..+..++++.....++..+++...
T Consensus 257 ~~S~sK~~~~~G~r~G~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 322 (418)
T 3rq1_A 257 CYSLSKGFTMYGQRVGAMIGISDDE--------------EIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKE 322 (418)
T ss_dssp EEESTTTTTCCSSCCEEEEEEESSH--------------HHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHH
T ss_pred EEeCCCCCcCcCCcceEEEEEeCCH--------------HHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHH
Confidence 88999976 5788899998 55 4444433211 000112345555555444443210
Q ss_pred -CHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCC
Q 010058 351 -TPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPG 429 (519)
Q Consensus 351 -~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 429 (519)
....+++++++.++++.+.+.|++.|+++..+ ..+.+.++++. +..++.+.|.++||.+. |+ ++
T Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~----~~~~~~~~l~~~gi~v~----~g------~~ 387 (418)
T 3rq1_A 323 YEAERNCYYQLIRDRADIFKQEAAQVGLPMLPY-RGGFFITIPTD----SANAICEELKKEHIYVI----AL------AN 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC-CSSSEEEEECT----THHHHHHHHHHTTEECE----EC------SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEcCCC----CHHHHHHHHHhCCEEEe----cC------CC
Confidence 01223566788889999999999889887654 23445555542 56788888999999996 44 36
Q ss_pred eEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 430 GIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 430 ~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
++||++.. .+ +++++++++.|.++++.
T Consensus 388 ~iRis~~~-~~----~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 388 GIRIAACG-IP----KCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp EEEEEGGG-SC----HHHHTTHHHHHHHHHHH
T ss_pred CeEEEEec-CC----HHHHHHHHHHHHHHHHH
Confidence 79999652 34 79999999999998864
No 116
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.93 E-value=9.4e-25 Score=226.26 Aligned_cols=334 Identities=13% Similarity=0.113 Sum_probs=217.0
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL- 162 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al- 162 (519)
..+++++.+++++.+.+.+.....|+. .++..+... .+++++++++|++. .|.+++|+.|+..++.++
T Consensus 10 ~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~g~~~l~~----~l~~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~ 78 (418)
T 2c81_A 10 EWPQHSDRTRRKIEEVFQSNRWAISGY--WTGEESMER----KFAKAFADFNGVPY-----CVPTTSGSTALMLALEALG 78 (418)
T ss_dssp CSSCCCHHHHHHHHHHHHHTCCSTTSB--CCSSCCHHH----HHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHhcCCccccCc--ccCCHHHHH----HHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcC
Confidence 344568999999999887631111221 112222234 44488889999873 488888888988899999
Q ss_pred cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccccccccccH
Q 010058 163 LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDY 242 (519)
Q Consensus 163 l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~ 242 (519)
++|||+|+++++.|.++... +...|..+..+ +++++++.+|++++++++++ ++++|+++. .+|...++
T Consensus 79 ~~~gd~Vl~~~~~~~~~~~~--------~~~~g~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~ 146 (418)
T 2c81_A 79 IGEGDEVIVPSLTWIATATA--------VLNVNALPVFV--DVEADTYCIDPQLIKSAITD-KTKAIIPVH-LFGSMANM 146 (418)
T ss_dssp CCTTCEEEEESSSCTHHHHH--------HHHTTCEEEEE--CBCTTTCSBCHHHHGGGCCT-TEEEECCBC-CTTCCCCH
T ss_pred CCCcCEEEECCCccHhHHHH--------HHHcCCEEEEE--ecCCCCCCcCHHHHHHhhCC-CCeEEEEeC-CcCCcccH
Confidence 89999999999888776542 22335444444 45545688999999999886 889888753 37888999
Q ss_pred HHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHh
Q 010058 243 ARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKI 322 (519)
Q Consensus 243 ~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i 322 (519)
++|.++|+++|++||+|++|..+....+.....+..+++.++|.||+++++++|+++++++ ++.+++
T Consensus 147 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~-------------~l~~~~ 213 (418)
T 2c81_A 147 DEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNP-------------RLFELI 213 (418)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCH-------------HHHHHH
T ss_pred HHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECCH-------------HHHHHH
Confidence 9999999999999999999988763222111112234455555599987668899998642 222222
Q ss_pred hhcc----------------cC------CCCCCc--cHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CC
Q 010058 323 NQAV----------------FP------GLQGGP--HNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GY 377 (519)
Q Consensus 323 ~~~~----------------~~------~~~g~~--~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 377 (519)
.... +. ...|.. .....+++ ++... ..+++..++.+++++++.+.|.++ |+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~--~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~ 289 (418)
T 2c81_A 214 QQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAI--LLDQL--QELDDKNAIREKNAMFLNDALSKIDGI 289 (418)
T ss_dssp HHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHH--HHHHH--TTHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred HHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 1110 00 000100 00111111 12222 246778888889999999999887 88
Q ss_pred EEecCCCC----c-ceeeeeccC---CCCcHHHHHHhhccc-CeE---EcccccCCCCCC--------------------
Q 010058 378 DLVSGGTE----N-HLVLVNLRN---KGIDGSRVEKVLESV-HIA---ANKNTVPGDVSA-------------------- 425 (519)
Q Consensus 378 ~~~~~~~~----~-~~~~v~~~~---~~~~~~~~~~~L~~~-gI~---v~~~~~p~~~~~-------------------- 425 (519)
.+..+... . +++.+.+.. .+.+..++.+.|.+. ||. ++..+.|....+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (418)
T 2c81_A 290 KVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAY 369 (418)
T ss_dssp EECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHH
T ss_pred ccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccc
Confidence 87643221 1 122244432 156788899989887 999 875443321100
Q ss_pred ----CC-------CCeEEeccCccc-cCCCCHHHHHHHHHHHHHHHHH
Q 010058 426 ----MV-------PGGIRMGTPALT-SRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 426 ----~~-------~~~iRi~~~~~t-trg~~~~di~~l~~~l~~~l~~ 461 (519)
.. .+.|||+++..+ | ++|+++++++|+++++.
T Consensus 370 ~~~~~~~~~~~~~~~~lrl~~~~~~gt----~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 370 WRGLHYPVSERASGQSIVIHHAILLAE----PSHLSLLVDAVAELARK 413 (418)
T ss_dssp HHTCCCHHHHHHHHHEEEEEGGGGGSC----HHHHHHHHHHHHHHHHT
T ss_pred cccCCChHHHHHHhCEEEecCCccCCC----HHHHHHHHHHHHHHHHh
Confidence 00 157999999888 8 99999999999998763
No 117
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.93 E-value=5.5e-24 Score=220.14 Aligned_cols=341 Identities=14% Similarity=0.120 Sum_probs=226.9
Q ss_pred ccCeeecCCC------CCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH------cC--CCCCC
Q 010058 76 WKGLELIPSE------NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA------FQ--LDPAK 141 (519)
Q Consensus 76 ~~~i~L~a~e------n~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~------~g--~~~~~ 141 (519)
.+.|+|..+. -++++.+.+++.+.+.+....+| +...+..++++.+.+++.+. .| +++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~-- 104 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGY------FPTVGSPEAREAVATWWRNSFVHKEELKSTIVK-- 104 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSC------CCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCG--
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCc------CCCCCCHHHHHHHHHHHHhhhcccccCCCCCCc--
Confidence 3468887664 34689999999988865211123 32234566776555666532 23 344
Q ss_pred CcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHH
Q 010058 142 WGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKS 220 (519)
Q Consensus 142 ~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~ 220 (519)
.+|++++|++ ++..++.++++|||+|+++++.|.++.. .+...|..+..++++.+ +++.+|+++++++
T Consensus 105 --~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~ 173 (416)
T 1bw0_A 105 --DNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET--------VCKAYGIGMHFYNCRPE-NDWEADLDEIRRL 173 (416)
T ss_dssp --GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEEEGG-GTTEECHHHHHHH
T ss_pred --ceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCcEEEEeecCcc-cCCCCCHHHHHHH
Confidence 3599999988 8888999999999999999988776543 12233544555554321 2467999999999
Q ss_pred hhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC----CCCCCC-----CCeEEEEcC
Q 010058 221 AALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV----IPSPFE-----YADVVTTTT 286 (519)
Q Consensus 221 i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~----~~~p~~-----~~di~~~S~ 286 (519)
+++ ++++|+++ ++| +|...+ +++|.++|+++|++||+|++|.. +...+. ...++. ..++++.|+
T Consensus 174 l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (416)
T 1bw0_A 174 KDD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAG-MVFKGKDPNATFTSVADFETTVPRVILGGT 251 (416)
T ss_dssp CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTT-CBCCSSCTTCCCCCTTSSCCSCCEEEEEES
T ss_pred hcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCCCCccCHHHccCCCcEEEEecc
Confidence 986 78888777 666 788887 89999999999999999999875 222221 111111 135778899
Q ss_pred CCcc--cCCCcceEEeecc--cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH
Q 010058 287 HKSL--RGPRGAMIFFRKG--VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362 (519)
Q Consensus 287 ~K~l--~GprgG~i~~~~~--~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~ 362 (519)
||++ +|.|.|+++++++ +.. .+...+..... ..++++....+++..+++......+++..++++
T Consensus 252 sK~~~~~Glr~G~~~~~~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 319 (416)
T 1bw0_A 252 AKNLVVPGWRLGWLLYVDPHGNGP----------SFLEGLKRVGM--LVCGPCTVVQAALGEALLNTPQEHLDQIVAKIE 319 (416)
T ss_dssp TTTTSCGGGCCEEEEEECTTCSCH----------HHHHHHHHHHH--HHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred hhhCCCCCceEEEEEeeCchhhHH----------HHHHHHHHHhc--cccCCCcHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 9985 5778899998773 210 12211111100 013456666777777777544445688899999
Q ss_pred HHHHHHHHHHHhc-CCEEecCCCCcceeeeeccC----CCCcHHHHHHhh-cccCeEEcccccCCCCCCCCCCeEEeccC
Q 010058 363 SNSSKFARSLLER-GYDLVSGGTENHLVLVNLRN----KGIDGSRVEKVL-ESVHIAANKNTVPGDVSAMVPGGIRMGTP 436 (519)
Q Consensus 363 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRi~~~ 436 (519)
++++++.+.|++. |+.++.+ ....++++.+.. .+.+..++.+.| +++||.++. |... ..++++||++.
T Consensus 320 ~~~~~l~~~L~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~----g~~f-~~~~~iRis~~ 393 (416)
T 1bw0_A 320 ESAMYLYNHIGECIGLAPTMP-RGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLP----GTIF-HAPGFTRLTTT 393 (416)
T ss_dssp HHHHHHHHHHTTSTTEEECCC-CBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEE----GGGG-TCTTEEEEECC
T ss_pred HHHHHHHHHHHhCCCCcccCC-CeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEec----cccc-CCCCeEEEEec
Confidence 9999999999988 8876644 234455655532 124566776666 689999973 3321 12468999984
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 437 ALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 437 ~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
++ ++++++.++.|.++++.
T Consensus 394 --~~----~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 394 --RP----VEVYREAVERIKAFCQR 412 (416)
T ss_dssp --SC----HHHHHHHHHHHHHHHHH
T ss_pred --CC----HHHHHHHHHHHHHHHHH
Confidence 44 78999999999888864
No 118
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.93 E-value=1.6e-24 Score=218.83 Aligned_cols=323 Identities=16% Similarity=0.166 Sum_probs=211.1
Q ss_pred cCeeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH-HH
Q 010058 77 KGLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS-PA 154 (519)
Q Consensus 77 ~~i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs-~a 154 (519)
..|+|..+.. .+++.|++++.+.+.. + . ..|+..+. .+.+++++++++| .. .+|++++|+ .+
T Consensus 8 ~~id~~~~~~~~~~~~v~~a~~~~~~~-~----~--~~~~~~~~----~~~l~~~la~~~g-~~----~~v~~~~~gt~a 71 (356)
T 1v72_A 8 PALGFSSDNIAGASPEVAQALVKHSSG-Q----A--GPYGTDEL----TAQVKRKFCEIFE-RD----VEVFLVPTGTAA 71 (356)
T ss_dssp CCCBCSCGGGCCCCHHHHHHHHHTTSS-C----C--CSTTCSHH----HHHHHHHHHHHHT-SC----CEEEEESCHHHH
T ss_pred ceEeeccCCccCCCHHHHHHHHhhccC-c----c--cccccchH----HHHHHHHHHHHhC-CC----CcEEEeCCccHH
Confidence 4466654432 4689999999876532 1 1 12333333 3444588999999 32 246665555 49
Q ss_pred HHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeee--eeeeEEEeeeeCCCCCCCCHHHHHH-Hhhhh------C
Q 010058 155 NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLDESTGYIDYEQLEK-SAALF------R 225 (519)
Q Consensus 155 ~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~--g~~~~~v~~~~d~~~~~iD~d~l~~-~i~~~------k 225 (519)
+..++.++++|||+|++.++.|++....+ .+... |..+..++ .+ ++.+|++++++ ++++. +
T Consensus 72 ~~~al~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~g~~~~~v~--~~--~~~~d~~~l~~~~i~~~~~~~~~~ 141 (356)
T 1v72_A 72 NALCLSAMTPPWGNIYCHPASHINNDECG------APEFFSNGAKLMTVD--GP--AAKLDIVRLRERTREKVGDVHTTQ 141 (356)
T ss_dssp HHHHHHTSCCTTEEEEECTTSHHHHSSTT------HHHHHTTSCEEEECC--CG--GGCCCHHHHHHHTTSSTTCTTSCE
T ss_pred HHHHHHHhcCCCCEEEEcCccchhhhhch------HHHHHhCCcEEEEec--CC--CCeEcHHHHHHHhhhcchhhccCC
Confidence 88899999999999999887766554320 02222 44444443 33 36899999999 88752 5
Q ss_pred CcEEEEc-cccccc---cccHHHHHHHHhhcCCEEEehhhhhhhcc-ccCCCCCCC---CCCeEEEEcCCCcccCCCc-c
Q 010058 226 PKLIVAG-ASAYAR---LYDYARIRKVCDKQKAVMLADMAHISGLV-AAGVIPSPF---EYADVVTTTTHKSLRGPRG-A 296 (519)
Q Consensus 226 ~klIi~~-~sn~g~---~~d~~~i~~ia~~~~~~livD~ah~~g~~-~~~~~~~p~---~~~di~~~S~~K~l~Gprg-G 296 (519)
+++|+++ ++|+|. ..++++|+++|++||+++|+|++|..+.. ..+..+..+ .++|++++|+||+ .+|.| |
T Consensus 142 ~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g 220 (356)
T 1v72_A 142 PACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEA 220 (356)
T ss_dssp EEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEE
T ss_pred ceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccE
Confidence 7899888 555887 55688999999999999999999865422 222222222 1678999999999 55656 6
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcc-cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAV-FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
++++++ ++.+.+.... ..+....+ ...+...++..+....+.+..+++.++++++.+.|+++
T Consensus 221 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 283 (356)
T 1v72_A 221 IVLFNT--------------SLATEMSYRRKRAGHLSSK---MRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGL 283 (356)
T ss_dssp EEESSG--------------GGHHHHHHHHHHTTCCCSS---THHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEECH--------------HHHhhHHHHhhccCchhhh---HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhC
Confidence 888876 3333322211 11111111 11222334455554456777888899999999999986
Q ss_pred -CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 376 -GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 376 -g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
|++++.+ ...+++++.+. .++.+.|.+.||.++ ||.. ..+.+|++++..++ ++|++++++.
T Consensus 284 ~g~~~~~~-~~~~~~~~~~~------~~~~~~l~~~gi~v~----~g~~---~~~~iRi~~~~~~~----~~~i~~~~~~ 345 (356)
T 1v72_A 284 GGVEVLGG-TEANILFCRLD------SAMIDALLKAGFGFY----HDRW---GPNVVRFVTSFATT----AEDVDHLLNQ 345 (356)
T ss_dssp TTEEEESC-CCSSEEEEEEC------HHHHHHHHHTTCBCB----CSSS---STTEEEEECCTTCC----HHHHHHHHHH
T ss_pred CCcEEccC-CCccEEEEEcC------HHHHHHHHhcCeEEe----cccc---CCCeEEEEecCCCC----HHHHHHHHHH
Confidence 8887654 33455666542 367777888899987 3321 15789999887777 8999999999
Q ss_pred HHHHHHH
Q 010058 455 FDAAVKL 461 (519)
Q Consensus 455 l~~~l~~ 461 (519)
|+++++.
T Consensus 346 l~~~l~~ 352 (356)
T 1v72_A 346 VRLAADR 352 (356)
T ss_dssp HHHTC--
T ss_pred HHHHHHh
Confidence 9887753
No 119
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.93 E-value=2.2e-24 Score=229.03 Aligned_cols=322 Identities=15% Similarity=0.116 Sum_probs=211.5
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcC--------------CCCEEEEecCCCcc
Q 010058 114 YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLK--------------PHERIMALDLPHGG 178 (519)
Q Consensus 114 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~--------------pGD~Vl~~~~~~~~ 178 (519)
|.......++|+.+++|+++++|++.+. ..+.+++|++ ||..++.++.+ |++.|++++..|.+
T Consensus 127 ~~~~p~~~~le~~~~~~l~~~~g~~~~~--~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s 204 (511)
T 3vp6_A 127 YEIAPVFVLMEQITLKKMREIVGWSSKD--GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS 204 (511)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCCSSS--CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTH
T ss_pred cccCchHHHHHHHHHHHHHHHhCCCCCC--CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHH
Confidence 3445778899999999999999997421 2466666665 88877777643 67889999877766
Q ss_pred cccccccccCCceeeeee---eeEEEeeeeCCCCCCCCHHHHHHHhhhhC-----CcEEEEc-ccc-ccccccHHHHHHH
Q 010058 179 HLSHGYQTDTKKISAVSI---FFETMPYRLDESTGYIDYEQLEKSAALFR-----PKLIVAG-ASA-YARLYDYARIRKV 248 (519)
Q Consensus 179 ~~~~~~~~~~~~v~~~g~---~~~~v~~~~d~~~~~iD~d~l~~~i~~~k-----~klIi~~-~sn-~g~~~d~~~i~~i 248 (519)
.... +...|. .+..++ .+ +++.+|+++|++++.+.+ |++|+++ ++| +|...|+++|.++
T Consensus 205 ~~~~--------~~~~g~g~~~~~~v~--~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~i 273 (511)
T 3vp6_A 205 IKKA--------GAALGFGTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADI 273 (511)
T ss_dssp HHHH--------HHHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHH
T ss_pred HHHH--------HHHcCCCCCcEEEee--cC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHH
Confidence 5442 223343 344444 44 468999999999998632 8888887 555 8999999999999
Q ss_pred HhhcCCEEEehhhhhhhccccCCCCC---CCCCCeEEEEcCCCcccCCCc-ceEEeecccccc------c--ccCcchhh
Q 010058 249 CDKQKAVMLADMAHISGLVAAGVIPS---PFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEI------N--KQGQEVMY 316 (519)
Q Consensus 249 a~~~~~~livD~ah~~g~~~~~~~~~---p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~------~--~~g~~~~~ 316 (519)
|++||+++++|++|..|......... .+.++|++++++||+|.+|.+ |++++++..... + ..+....+
T Consensus 274 a~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 353 (511)
T 3vp6_A 274 CEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHY 353 (511)
T ss_dssp HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSS
T ss_pred HHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCccccc
Confidence 99999999999999887764321111 123679999999999988877 888887742100 0 00000000
Q ss_pred hHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecC-CCCcceeeeecc
Q 010058 317 AYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSG-GTENHLVLVNLR 394 (519)
Q Consensus 317 ~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~v~~~ 394 (519)
.. ..+.. ....+++.. ....++.++++.+...++++..++..++++++.+.|++. |++++.+ .....++.+.+.
T Consensus 354 ~~--~~~~~-~~~~~~~r~-~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~ 429 (511)
T 3vp6_A 354 DV--SYDTG-DKAIQCGRH-VDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYI 429 (511)
T ss_dssp CG--GGCCG-GGSSCSSCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEEC
T ss_pred cc--ccCcc-CCCCCCCCc-hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEe
Confidence 00 00000 001111211 133455666776666788999999999999999999988 9998873 122233344333
Q ss_pred CCCCc---------------HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc-CccccCCCCHHHHHHHHHHHHHH
Q 010058 395 NKGID---------------GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 395 ~~~~~---------------~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~-~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+.+++ ..++.+.|.+.|+.+.. ..|.. ...+.+|+++ +..++ ++|++++++.|.++
T Consensus 430 p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~-~~~~~---~~~~~lRi~~~~~~~t----~~di~~ll~~i~~~ 501 (511)
T 3vp6_A 430 PQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG-YQPQG---DKANFFRMVISNPAAT----QSDIDFLIEEIERL 501 (511)
T ss_dssp CGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE-EEEET---TEEEEEEECCCCTTCC----HHHHHHHHHHHHHH
T ss_pred CccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE-EEEeC---CceEEEEEEecCCCCC----HHHHHHHHHHHHHH
Confidence 32221 22577778777765421 11111 1124699998 56677 89999999999876
Q ss_pred HH
Q 010058 459 VK 460 (519)
Q Consensus 459 l~ 460 (519)
-.
T Consensus 502 ~~ 503 (511)
T 3vp6_A 502 GQ 503 (511)
T ss_dssp HC
T ss_pred HH
Confidence 64
No 120
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.93 E-value=1.6e-23 Score=212.11 Aligned_cols=317 Identities=15% Similarity=0.100 Sum_probs=218.8
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
++.|+|..++|+ +++.|.+++.+.+.+.. +||.. ...+++ +++++++|++++ +|.+++|++
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~-------~~~~l~----~~la~~~~~~~~----~i~~~~g~t 88 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKNLG--VYPDV-------NYRRLN----KSIENYLKLKDI----GIVLGNGAS 88 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHGGG--SCCCT-------TCHHHH----HHHHHHHTCCSC----EEEEESSHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHHhc--CCCCc-------cHHHHH----HHHHHHhCCCcc----eEEEcCCHH
Confidence 457899888875 57899999998877632 44332 224454 788888898774 588888887
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++ |+|++.++.|.++.. .+...|..+..++ .+ +++.+|++++++++++ +++|+++
T Consensus 89 ~al~~~~~~~----d~vi~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~~~~~~~~l~~~l~~--~~~v~i~ 151 (361)
T 3ftb_A 89 EIIELSISLF----EKILIIVPSYAEYEI--------NAKKHGVSVVFSY--LD-ENMCIDYEDIISKIDD--VDSVIIG 151 (361)
T ss_dssp HHHHHHHTTC----SEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CC-TTSCCCHHHHHHHTTT--CSEEEEE
T ss_pred HHHHHHHHHc----CcEEEecCChHHHHH--------HHHHcCCeEEEee--cC-cccCCCHHHHHHhccC--CCEEEEe
Confidence 887677766 999999977766543 2223354454554 44 2356888999999886 8998887
Q ss_pred -ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccc--cCCCCC-CCCCCeEEEEcCCCcc--cCCCcceEE-ee
Q 010058 233 -ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVA--AGVIPS-PFEYADVVTTTTHKSL--RGPRGAMIF-FR 301 (519)
Q Consensus 233 -~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~--~~~~~~-p~~~~di~~~S~~K~l--~GprgG~i~-~~ 301 (519)
++| +|...+ +++|+++|++||+++|+|++|...... ...... ......+++.|+||++ +|.|.|+++ .+
T Consensus 152 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~ 231 (361)
T 3ftb_A 152 NPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231 (361)
T ss_dssp TTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC
Confidence 666 787765 667778888999999999998644332 000000 0013457888999986 467779988 55
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCE-E
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYD-L 379 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~ 379 (519)
+ ++.+.+.....+ .+++...++++.++++. ...+++..+++.++++.+.+.|++. |+. +
T Consensus 232 ~--------------~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 292 (361)
T 3ftb_A 232 K--------------EIAAKIKAKQNP---WNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRV 292 (361)
T ss_dssp H--------------HHHHHHHTTSCT---TCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEE
T ss_pred H--------------HHHHHHHhhCCC---CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCcee
Confidence 5 566655443222 35566666666666553 2345888899999999999999998 777 5
Q ss_pred ecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 380 VSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
..+ ...++++.+.. .+..++.+.|.+.||.++ ||.. +...++.+|++++ + ++|++++.+.|+++
T Consensus 293 ~~~--~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~----~g~~~~~~~~~~iRis~~---~----~~~~~~l~~~l~~~ 357 (361)
T 3ftb_A 293 FSP--HANFVLCRLEN--ISGEKLYDSLLKEDIVIR----RCCNFIGLDDSFVRFAIK---D----EKKNTKFLRALKGV 357 (361)
T ss_dssp ECC--SSSEEEEEESS--SCHHHHHHHHHTTTEECE----ECTTSTTCCTTEEEEECC---C----HHHHHHHHHHHHHH
T ss_pred cCC--CCeEEEEEcCC--CCHHHHHHHHHHCCeEEe----eCccCCCCCCCEEEEEcC---C----HHHHHHHHHHHHHH
Confidence 543 23455666543 567888888888899997 4443 3344688999975 3 78999999999887
Q ss_pred HH
Q 010058 459 VK 460 (519)
Q Consensus 459 l~ 460 (519)
.+
T Consensus 358 ~~ 359 (361)
T 3ftb_A 358 EN 359 (361)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 121
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.93 E-value=2.3e-23 Score=216.42 Aligned_cols=309 Identities=11% Similarity=0.061 Sum_probs=207.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCC-----cceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCce
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKW-----GVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKI 191 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~-----~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v 191 (519)
.+..++++.+.+++++.+|.+.+.. ..+|++++|++ ++..++.++++|||+|++.++.|.++.. .+
T Consensus 78 ~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~ 149 (425)
T 2r2n_A 78 AGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQ--------SL 149 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HH
Confidence 3445677778888888889864100 02699999988 8888999999999999999977766543 22
Q ss_pred eeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh-----------hCCcEEEEc--ccc-ccccccHH---HHHHHHhhcCC
Q 010058 192 SAVSIFFETMPYRLDESTGYIDYEQLEKSAAL-----------FRPKLIVAG--ASA-YARLYDYA---RIRKVCDKQKA 254 (519)
Q Consensus 192 ~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~-----------~k~klIi~~--~sn-~g~~~d~~---~i~~ia~~~~~ 254 (519)
...|..+..++ .+. ..+|++++++.+++ .++++|++. ++| +|...+.+ +|.++|++||+
T Consensus 150 ~~~g~~~~~v~--~~~--~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~ 225 (425)
T 2r2n_A 150 HPLGCNIINVA--SDE--SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225 (425)
T ss_dssp GGGTCEEEEEC--EET--TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHcCCEEEEeC--cCC--CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCC
Confidence 33455555554 342 24899999999872 268888774 466 78877755 88999999999
Q ss_pred EEEehhhhhhhccccCCCCCCC-----CCCeEEEEcCCCccc-CCCcceEEeecccccccccCcchhhhHHHHhhhcccC
Q 010058 255 VMLADMAHISGLVAAGVIPSPF-----EYADVVTTTTHKSLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFP 328 (519)
Q Consensus 255 ~livD~ah~~g~~~~~~~~~p~-----~~~di~~~S~~K~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~ 328 (519)
++|+|++|... ...+....++ .+.++++.|+||+++ |+|.|++++++ ++.+.+......
T Consensus 226 ~li~De~~~~~-~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~--------------~l~~~l~~~~~~ 290 (425)
T 2r2n_A 226 LIIEDDPYYFL-QFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPK--------------PLIERVILHIQV 290 (425)
T ss_dssp EEEEECTTGGG-BSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEH--------------HHHHHHHHHHHT
T ss_pred EEEEECCcccc-cCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCH--------------HHHHHHHHHHHH
Confidence 99999997632 2222111111 135688999999984 66779999988 555544432222
Q ss_pred CCCCCccHHHHHHHHHHHHHhcC----HhHHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCcceeeeeccCCCCcHHH
Q 010058 329 GLQGGPHNHTISGLAVALKQVKT----PEYKAYQEQVLSNSSKFARSLLER--GYDLVSGGTENHLVLVNLRNKGIDGSR 402 (519)
Q Consensus 329 ~~~g~~~~~~iaal~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~v~~~~~~~~~~~ 402 (519)
. ..+++.....++..+++.... ...++..+++.++++.+.+.|++. |+..+..+....++|+.+.. ..+..+
T Consensus 291 ~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~-~~~~~~ 368 (425)
T 2r2n_A 291 S-TLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKG-INDVKE 368 (425)
T ss_dssp T-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETT-CSCCHH
T ss_pred h-cCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCC-CCCHHH
Confidence 1 234455556666666665321 234667788889999999999985 76432322345667777743 234444
Q ss_pred -HHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 403 -VEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 403 -~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+.+.|.++||.+......+.......+++||++.. .+ +++++++++.|.++++
T Consensus 369 ~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~----~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 369 LIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-AS----PEQMDVAFQVLAQLIK 422 (425)
T ss_dssp HHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CC----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CC----HHHHHHHHHHHHHHHH
Confidence 57788889999974322111111235789999874 35 7999999999998875
No 122
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.92 E-value=1e-23 Score=218.67 Aligned_cols=355 Identities=14% Similarity=0.082 Sum_probs=230.1
Q ss_pred hhhhcCHHHHHHHHHHHHhcccCeeecCCCCC-----CcHHHHHHHh--hHhhhc-cCCCCCCCCCCCCchhHHHHHHHH
Q 010058 56 PLEEIDPEIADIIELEKARQWKGLELIPSENF-----TSVSVMQAVG--SVMTNK-YSEGYPGARYYGGNEYIDMAESLC 127 (519)
Q Consensus 56 ~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~-----~~~~V~ea~~--~~l~~~-~~~g~p~~~~y~~~~~~~~le~~~ 127 (519)
.++++.+.++..+.+... +...|+|..+.+. +++.+++++. +.+.+. ...+|| +...+..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp-----~~~~g~~~lr--- 76 (423)
T 3ez1_A 6 ASRPALDLARQAYEAFKA-RGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYP-----GGVAGLPSAR--- 76 (423)
T ss_dssp CCHHHHHHHHHHHHHHHH-HTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSC-----SCTTCCHHHH---
T ss_pred HHHHHHHHHHHHHHHhhc-CCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCC-----CCCCChHHHH---
Confidence 455667778877776543 3456899877665 4557888775 444321 011231 3334455666
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCcHH-HHH--HHHHhhcC--C---------CCEEEEecCCCcccccccccccCCceee
Q 010058 128 QKRALDAFQLDPAKWGVNVQSLSGSP-ANF--QVYTALLK--P---------HERIMALDLPHGGHLSHGYQTDTKKISA 193 (519)
Q Consensus 128 ~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~--~~~~all~--p---------GD~Vl~~~~~~~~~~~~~~~~~~~~v~~ 193 (519)
+.++++++++++ +|++++|++ ++. .++.++++ | ||+|++.++.|.++.. .+..
T Consensus 77 -~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~ 143 (423)
T 3ez1_A 77 -ALFAGYLDVKAE----NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFL--------LLQT 143 (423)
T ss_dssp -HHHHHHTTSCGG----GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHH--------HHHH
T ss_pred -HHHHHHhCCChh----hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHH--------HHHH
Confidence 777888898874 599999998 775 68888888 8 5999999977766543 2233
Q ss_pred eeeeeEEEeeeeCCCCCCCCHHHHHHHhh-hhCCcEEEEc--ccc-ccccccHH---HHHHHH-hhcCCEEEehhhhhhh
Q 010058 194 VSIFFETMPYRLDESTGYIDYEQLEKSAA-LFRPKLIVAG--ASA-YARLYDYA---RIRKVC-DKQKAVMLADMAHISG 265 (519)
Q Consensus 194 ~g~~~~~v~~~~d~~~~~iD~d~l~~~i~-~~k~klIi~~--~sn-~g~~~d~~---~i~~ia-~~~~~~livD~ah~~g 265 (519)
.|..+..++ .+++ .+|++++++++. ..++++|++. ++| +|...+.+ +|+++| +++|+++|+|++|...
T Consensus 144 ~g~~~~~v~--~~~~--g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~ 219 (423)
T 3ez1_A 144 LGFELLTVD--MQSD--GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVH 219 (423)
T ss_dssp HTCEEEEEE--EETT--EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSC
T ss_pred cCCEEEecc--CCCC--CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchh
Confidence 455555555 4432 399999999995 3378999765 466 78887766 778888 8999999999997643
Q ss_pred cccc-CCCC--C--------CCCCCeEEEEcCCCc-ccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCC
Q 010058 266 LVAA-GVIP--S--------PFEYADVVTTTTHKS-LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGG 333 (519)
Q Consensus 266 ~~~~-~~~~--~--------p~~~~di~~~S~~K~-l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~ 333 (519)
.+.. +..+ + ...+.++++.|+||+ ++|+|.|++++++ ++.+.+........ .+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~--------------~~~~~~~~~~~~~~-~~ 284 (423)
T 3ez1_A 220 HLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE--------------DNIRWLSKYLGAQS-IG 284 (423)
T ss_dssp BCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH--------------HHHHHHHHHHHHSC-SC
T ss_pred hcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH--------------HHHHHHHHHHhhhc-cC
Confidence 3222 1111 0 012467899999995 5788889999987 44444433221111 23
Q ss_pred ccHHHHHHHHHHHHHh-c--CHhHHHHHHHHHHHHHHHHHHHHh----cC--CEEecCCCCcceeeeeccCCCCcHHHHH
Q 010058 334 PHNHTISGLAVALKQV-K--TPEYKAYQEQVLSNSSKFARSLLE----RG--YDLVSGGTENHLVLVNLRNKGIDGSRVE 404 (519)
Q Consensus 334 ~~~~~iaal~~al~~~-~--~~~~~~~~~~~~~~~~~l~~~L~~----~g--~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 404 (519)
++.....++..++... . ...+++..+.+.++++.+.+.|.+ .| +.+..+ ....++++.+... +..++.
T Consensus 285 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~~~~~--~~~~~~ 361 (423)
T 3ez1_A 285 PNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLP-KGGYFISLDTAEP--VADRVV 361 (423)
T ss_dssp CCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCC-SBSSCEEEEESSS--CHHHHH
T ss_pred CCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCC-CccEEEEEECCCC--cHHHHH
Confidence 3444444444555541 1 123455566666677776666655 44 554433 3455677776532 577888
Q ss_pred HhhcccCeEEcccccCCCC-C---CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 405 KVLESVHIAANKNTVPGDV-S---AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 405 ~~L~~~gI~v~~~~~p~~~-~---~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+.|.++||.++.+ |.. + ....++|||++... + +++++++++.|.++++..
T Consensus 362 ~~l~~~gv~v~~~---g~~~~~~~~~~~~~iRis~~~~-~----~~~i~~~~~~l~~~l~~~ 415 (423)
T 3ez1_A 362 KLAEAAGVSLTPA---GATYPAGQDPHNRNLRLAPTRP-P----VEEVRTAMQVVAACIRLA 415 (423)
T ss_dssp HHHHHTTEECCCT---TTTSSTTCCSSSCEEEECCSSS-C----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEecC---cccccCCCCCCCCeEEEEcCCC-C----HHHHHHHHHHHHHHHHHH
Confidence 8999999999731 221 1 23468999998755 5 799999999999988754
No 123
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.92 E-value=1.3e-24 Score=224.45 Aligned_cols=281 Identities=16% Similarity=0.186 Sum_probs=195.0
Q ss_pred hcCHHHH---HHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhcc----CCCCCCCCCCCCchhHHHHHHHHHHHH
Q 010058 59 EIDPEIA---DIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKY----SEGYPGARYYGGNEYIDMAESLCQKRA 131 (519)
Q Consensus 59 ~~~~~~~---~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~----~~g~p~~~~y~~~~~~~~le~~~~~~~ 131 (519)
.+++++. +.++++.++|...+++++++|. +.|++++.+...... .+||+.. . ...+.+| +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~----~-~g~~~Le----~~l 83 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYN----D-IGRDSLD----RVY 83 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTT----C-HHHHHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCC----c-hhHHHHH----HHH
Confidence 4677777 6777788888899999999985 899999998654322 2233322 1 2355566 889
Q ss_pred HHHcCCCCCCCcceEE---eCCcHHHHHHHHHhhcCCCCEEEEec-CCCccccccc--cccc-CCceeeeeeeeEEEeee
Q 010058 132 LDAFQLDPAKWGVNVQ---SLSGSPANFQVYTALLKPHERIMALD-LPHGGHLSHG--YQTD-TKKISAVSIFFETMPYR 204 (519)
Q Consensus 132 ~~~~g~~~~~~~~~V~---~~sGs~a~~~~~~all~pGD~Vl~~~-~~~~~~~~~~--~~~~-~~~v~~~g~~~~~v~~~ 204 (519)
++++|.+. + +. ++||+.|+.+++.++++|||+|++.+ ..|+++.... .... ...+...|..+..++
T Consensus 84 A~l~g~e~----a-lv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~-- 156 (427)
T 3hvy_A 84 ANIFNTES----A-FVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVD-- 156 (427)
T ss_dssp HHHHTCSE----E-EEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECC--
T ss_pred HHHhCCCc----e-EEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEec--
Confidence 99999986 3 44 68888899999999999999999998 7776653110 0000 001112354444444
Q ss_pred eCCCCCCCCHHHHHHHhhh-hCCcEEEEcc----cc--ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCC
Q 010058 205 LDESTGYIDYEQLEKSAAL-FRPKLIVAGA----SA--YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 205 ~d~~~~~iD~d~l~~~i~~-~k~klIi~~~----sn--~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p 275 (519)
. +++.+|++++++++++ .+||+|+++. ++ +|...|+++|+++|++ +|+++++|++|..+... ..|
T Consensus 157 ~--~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~----~~p 230 (427)
T 3hvy_A 157 L--KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEE----KEP 230 (427)
T ss_dssp C--BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSS----SCG
T ss_pred C--CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccC----CCC
Confidence 3 3578999999999983 3899999986 33 5688899999999999 89999999998766522 123
Q ss_pred CC-CCeEEEEcCCCcccC---CCcceEEeecccccccccCcchhhhHHHHhhhc-ccCCCC--CCccHHHHHHHHHHHHH
Q 010058 276 FE-YADVVTTTTHKSLRG---PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-VFPGLQ--GGPHNHTISGLAVALKQ 348 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~G---prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--g~~~~~~iaal~~al~~ 348 (519)
+. ++|++++|+||+++| ++||+|++++ ++.+++... ..++.. .++.......+...+.
T Consensus 231 ~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~--------------~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~- 295 (427)
T 3hvy_A 231 TDVGADIIAGSLIKNIGGGIATTGGYIAGKE--------------EYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLF- 295 (427)
T ss_dssp GGGTCSEEEEETTSGGGTTTCCSCEEEEECH--------------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-
T ss_pred cccCCeEEEECCcccccccccceEEEEEECH--------------HHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHh-
Confidence 33 589999999999987 7899999987 566655542 233332 1221211111112222
Q ss_pred hcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 349 VKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
....+.++..+++..+++.|+++|+++.++
T Consensus 296 ----~~~~r~~~~~~~a~~la~~L~~~g~~V~p~ 325 (427)
T 3hvy_A 296 ----MAPHVTIEAVKGAVFCARIMELAGFDVLPK 325 (427)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHTTCEEESC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHhCCCeecCC
Confidence 135678889999999999999999988543
No 124
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.92 E-value=4.1e-24 Score=222.34 Aligned_cols=348 Identities=14% Similarity=0.109 Sum_probs=215.9
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHH
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPA 154 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a 154 (519)
+.|+|..+++. +++.|.+++.+.+.+ +..+ .+...|+......++++.+.+++.+.++++++ +|++++|++.
T Consensus 57 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~-~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~----~i~~t~G~~~ 130 (432)
T 3ei9_A 57 QVISLGIGDTTEPIPEVITSAMAKKAHE-LSTI-EGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDD----DVFVSDGAKC 130 (432)
T ss_dssp CCEECSSCCCCSCCCHHHHHHHHHHHHH-TTST-TTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGG----GEEEESCHHH
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhc-cccc-CCccCCCCCCCCHHHHHHHHHHHHccCCCCcc----eEEECCChHH
Confidence 56899877663 689999999998874 2111 11123444455677887777777665566663 5999999983
Q ss_pred HHHHHHhhcCCCCEEEEecCCCcccccccccccCCcee----eeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhCCcEE
Q 010058 155 NFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKIS----AVSIFFETMPYRLDES-TGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 155 ~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~----~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~klI 229 (519)
++.++.++++|||+|++.++.|.++..........++. .....+..++ ++++ +...|+++ . .++++|
T Consensus 131 al~~l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~-----~-~~~~~v 202 (432)
T 3ei9_A 131 DISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMR--CTPENGFFPDLST-----V-GRTDII 202 (432)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEE--CCGGGTTSCCGGG-----C-CCCSEE
T ss_pred HHHHHHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEec--cCcccCCcCChhh-----C-CCCCEE
Confidence 33356888999999999998887765422111110000 0001233343 3322 34555443 2 378988
Q ss_pred EEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CC---CCCeEEEEcCCCcc--cCCCcce
Q 010058 230 VAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PF---EYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 230 i~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~---~~~di~~~S~~K~l--~GprgG~ 297 (519)
+++ ++| +|..++ +++|+++|++||++||+|++|...... +.... .+ ...++++.|++|++ .|.|.|+
T Consensus 203 ~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~ 281 (432)
T 3ei9_A 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSD-DNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGW 281 (432)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCS-SCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEE
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccC-CCCCChhhcCCCCCeEEEEecchhccCCcccceEE
Confidence 887 766 787765 667777799999999999998754222 11110 01 14568999999986 6788899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY 377 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 377 (519)
++++++..... . ..+.+.+...... ..++++...+++..+++........++..+++.++++++.+.|.+.|+
T Consensus 282 ~~~~~~~~~~~---~---~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 354 (432)
T 3ei9_A 282 TVIPKKLLYSD---G---FPVAKDFNRIICT-CFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGY 354 (432)
T ss_dssp EECCTTCBCTT---S---CBHHHHHHHHHHH-SCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEChHHhhcc---h---HHHHHHHHHHhcc-ccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99988531000 0 0012323221111 123445555555444543211234678889999999999999999998
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHh-hcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKV-LESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
.+..+ ....++|+++. +.+..++... ++++||.++ ||.. ++.+.+++||++ .++ ++++++.++.|
T Consensus 355 ~~~~~-~~~~~~~~~~~--~~~~~~~~~~ll~~~gv~v~----~g~~f~~~~~~~iRis~--~~~----~e~l~~~l~rl 421 (432)
T 3ei9_A 355 DVYGG-KNAPYVWVHFP--NQSSWDVFAEILEKTHVVTT----PGSGFGPGGEGFVRVSA--FGH----RENILEACRRF 421 (432)
T ss_dssp CEEEC-SSSSEEEEECT--TSCHHHHHHHHHHHHCEECE----EGGGGCGGGTTEEEEEC--CSC----HHHHHHHHHHH
T ss_pred eecCC-CcceEEEEECC--CCCHHHHHHHHHHHCCEEEe----CchHhCCCCCCEEEEEe--cCC----HHHHHHHHHHH
Confidence 87754 23456777765 4556665554 556799997 4433 233468899996 335 78998888888
Q ss_pred HHHH
Q 010058 456 DAAV 459 (519)
Q Consensus 456 ~~~l 459 (519)
++--
T Consensus 422 ~~~~ 425 (432)
T 3ei9_A 422 KQLY 425 (432)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
No 125
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.92 E-value=5.4e-24 Score=215.15 Aligned_cols=321 Identities=15% Similarity=0.118 Sum_probs=213.3
Q ss_pred CeeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 78 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 78 ~i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
.+.|..+.+ .+++.|++++.+.+.+ | +.. .+...+++.+++++++++|++++ +|.+++|++ ++
T Consensus 15 ~i~l~~~~~~~~~~~v~~a~~~~~~~-~----~~~------~g~~~~~~~~~~~l~~~~g~~~~----~v~~~~g~t~a~ 79 (359)
T 1svv_A 15 PYSFVNDYSVGMHPKILDLMARDNMT-Q----HAG------YGQDSHCAKAARLIGELLERPDA----DVHFISGGTQTN 79 (359)
T ss_dssp CEECSCSCSSCCCHHHHHHHHHHTTC-C----CCS------TTCSHHHHHHHHHHHHHHTCTTS----EEEEESCHHHHH
T ss_pred eEEecCCCcCCCCHHHHHHHHHHHhh-c----ccc------ccccHHHHHHHHHHHHHhCCCCc----cEEEeCCchHHH
Confidence 567755444 5689999999988753 3 111 11234556666999999998764 588887777 99
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh------CCcEE
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF------RPKLI 229 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~------k~klI 229 (519)
..++.++++|||+|+++++.|.++.... .+...|..+..++ .+ ++.+|++++++.+++. ++++|
T Consensus 80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~------~~~~~g~~~~~v~--~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v 149 (359)
T 1svv_A 80 LIACSLALRPWEAVIATQLGHISTHETG------AIEATGHKVVTAP--CP--DGKLRVADIESALHENRSEHMVIPKLV 149 (359)
T ss_dssp HHHHHHHCCTTEEEEEETTSHHHHSSTT------HHHHTTCCEEEEC--CT--TSCCCHHHHHHHHHHSCSTTSCEEEEE
T ss_pred HHHHHHHhCCCCEEEEcccchHHHHHHH------HHhcCCCeeEEEe--CC--CCeecHHHHHHHHHHHHhccCCCceEE
Confidence 9899999999999999998887765431 1222344444554 33 5789999999999873 28999
Q ss_pred EEcccc-cccccc---HHHHHHHHhhcCCEEEehhhh---hhhccccCCCCCCC---CCCeEEEEcCCCcccCCCc-ceE
Q 010058 230 VAGASA-YARLYD---YARIRKVCDKQKAVMLADMAH---ISGLVAAGVIPSPF---EYADVVTTTTHKSLRGPRG-AMI 298 (519)
Q Consensus 230 i~~~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah---~~g~~~~~~~~~p~---~~~di~~~S~~K~l~Gprg-G~i 298 (519)
+++++| +|...+ +++|+++|+++|+++|+|++| ..|..... ...+ ..+|++++|+||+ .+|.+ |++
T Consensus 150 ~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l 226 (359)
T 1svv_A 150 YISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVND--LTLADIARLTDMFYIGATKA-GGMFGEALI 226 (359)
T ss_dssp EEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC--CCHHHHHHHCSEEEEECTTT-TCSSCEEEE
T ss_pred EEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc--hhhhhhhhcCCEEEEecccC-CCCCceEEE
Confidence 888445 788877 889999999999999999998 33332211 1100 1478999999996 56766 888
Q ss_pred EeecccccccccCcchhhhHHHHhhhcc-cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCC
Q 010058 299 FFRKGVKEINKQGQEVMYAYEDKINQAV-FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGY 377 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 377 (519)
++++++ .+.+.... ..+...+......++++. .+...++++..+++.++++++.+.|+..|+
T Consensus 227 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 289 (359)
T 1svv_A 227 ILNDAL--------------KPNARHLIKQRGALMAKGWLLGIQFEV---LMKDNLFFELGAHSNKMAAILKAGLEACGI 289 (359)
T ss_dssp ECSGGG--------------CTTHHHHHHHTTCCCTTTHHHHHHHHH---HTSTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEcccH--------------HHHHHHHHhcCCcccccchhhHHHHHH---HHhhhhHHHHHHHHHHHHHHHHHHhccCCe
Confidence 887742 22221110 011100112222233322 233445788899999999999999954488
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhhccc-CeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVLESV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
+++.+. ..+++++.+. .++.+.|.+. ||.+. +.. +...++||++++..++ ++|++++++.|+
T Consensus 290 ~~~~~~-~~~~~~~~~~------~~~~~~l~~~~gi~v~----~~~--~~~~~~iRi~~~~~~~----~~~i~~~~~~l~ 352 (359)
T 1svv_A 290 RLAWPS-ASNQLFPILE------NTMIAELNNDFDMYTV----EPL--KDGTCIMRLCTSWATE----EKECHRFVEVLK 352 (359)
T ss_dssp CBSSCC-SSSEECBEEE------HHHHHHHTTTEECEEE----EEE--TTTEEEEEEECCTTCC----HHHHHHHHHHHH
T ss_pred EEccCC-ccceEEEEcC------HHHHHHHHHhcCEEEE----ecc--cCCCceEEEEccCcCC----HHHHHHHHHHHH
Confidence 776542 3445555432 3566777666 99982 110 1234689999877777 899999999998
Q ss_pred HHHH
Q 010058 457 AAVK 460 (519)
Q Consensus 457 ~~l~ 460 (519)
++++
T Consensus 353 ~~~~ 356 (359)
T 1svv_A 353 RLVA 356 (359)
T ss_dssp HC--
T ss_pred HHHh
Confidence 8775
No 126
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.92 E-value=5.6e-24 Score=220.86 Aligned_cols=330 Identities=14% Similarity=0.190 Sum_probs=217.1
Q ss_pred eecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HH
Q 010058 80 ELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-AN 155 (519)
Q Consensus 80 ~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~-~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~ 155 (519)
+|..+++. +|+.+.+++.+.+... .|+. .....+++ +.+++++|.+ +|++++|++ ++
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~~~---------~y~~~~~~~~~l~----~~la~~~~~~------~v~~~~ggt~al 80 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALDSQ---------WLSNGGPLVREFE----ERVAGLAGVR------HAVATCNATAGL 80 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHHHT---------CCSSSCHHHHHHH----HHHHHHHTSS------EEEEESCHHHHH
T ss_pred cccccCCCCCChHHHHHHHHHHHhcC---------CcccCCHHHHHHH----HHHHHHhCCC------eEEEeCCHHHHH
Confidence 45556654 3669999998887652 1333 45566666 7778888875 367777766 88
Q ss_pred HHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc
Q 010058 156 FQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA 235 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn 235 (519)
..++.++. +||+|+++++.|.++... +...|..+..+ +++++++.+|++++++.+++ ++++|+++. .
T Consensus 81 ~~~l~~l~-~gd~Vlv~~~~~~~~~~~--------~~~~G~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~ 147 (424)
T 2po3_A 81 QLLAHAAG-LTGEVIMPSMTFAATPHA--------LRWIGLTPVFA--DIDPDTGNLDPDQVAAAVTP-RTSAVVGVH-L 147 (424)
T ss_dssp HHHHHHHT-CCSEEEEESSSCTHHHHH--------HHHTTCEEEEE--CBCTTTSSBCHHHHGGGCCT-TEEEEEEEC-G
T ss_pred HHHHHHcC-CCCEEEECCCccHHHHHH--------HHHcCCEEEEE--ecCCCcCCcCHHHHHHhhCc-CCcEEEEEC-C
Confidence 87888874 899999999888776542 22335444444 45555788999999998886 899988863 3
Q ss_pred ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC--CcccCCCcceEEeecccccccccCcc
Q 010058 236 YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH--KSLRGPRGAMIFFRKGVKEINKQGQE 313 (519)
Q Consensus 236 ~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~--K~l~GprgG~i~~~~~~~~~~~~g~~ 313 (519)
+|...++++|.++|+++|+++|+|++|..|....+.... ...|++++|+| |+|+|+++|+++++++
T Consensus 148 tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~--~~~di~~~S~sk~K~l~~~~~G~~v~~~~---------- 215 (424)
T 2po3_A 148 WGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAG--SLGDAEVFSFHATKAVNAFEGGAVVTDDA---------- 215 (424)
T ss_dssp GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT--SSSSEEEEECCTTSSSCCSSCEEEEESCH----------
T ss_pred CCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecc--cccCEEEEeCCCCCCccCCCCeEEEeCCH----------
Confidence 788899999999999999999999999877664332111 13578888776 9999999999999842
Q ss_pred hhhhHHHHhhhcccCCC--------CCCc-cHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecC-
Q 010058 314 VMYAYEDKINQAVFPGL--------QGGP-HNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSG- 382 (519)
Q Consensus 314 ~~~~~~~~i~~~~~~~~--------~g~~-~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~- 382 (519)
++.+.+......+. .|.+ ....++ .+.++.. ...++++.++..++++++.+.|.++ |+.++..
T Consensus 216 ---~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~-aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 289 (424)
T 2po3_A 216 ---DLAARIRALHNFGFDLPGGSPAGGTNAKMSEAA-AAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHD 289 (424)
T ss_dssp ---HHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGG
T ss_pred ---HHHHHHHHHHhcCccccccccccCcCCCcCHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCC
Confidence 33333322111111 1111 111121 1222322 2346778888899999999999887 8877652
Q ss_pred -CCCc--ceeeeeccC--CCCcHHHHHHhhcccCeEEcccccCC-CCCC-C-------C-------CCeEEeccCccccC
Q 010058 383 -GTEN--HLVLVNLRN--KGIDGSRVEKVLESVHIAANKNTVPG-DVSA-M-------V-------PGGIRMGTPALTSR 441 (519)
Q Consensus 383 -~~~~--~~~~v~~~~--~~~~~~~~~~~L~~~gI~v~~~~~p~-~~~~-~-------~-------~~~iRi~~~~~ttr 441 (519)
+... +++.+.+.. .+.+..++.+.|.+.||.++..+.+. ...+ . . ...||++++..++
T Consensus 290 ~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t- 368 (424)
T 2po3_A 290 RHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIG- 368 (424)
T ss_dssp GGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCC-
T ss_pred CCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCC-
Confidence 2111 233344432 14567888899999999997522111 0000 0 0 1228888777777
Q ss_pred CCCHHHHHHHHHHHHHHHHHHh
Q 010058 442 GFVEEDFEKVAEFFDAAVKLAL 463 (519)
Q Consensus 442 g~~~~di~~l~~~l~~~l~~~~ 463 (519)
++|++++++.|.++++...
T Consensus 369 ---~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 369 ---DDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp ---HHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHhhhH
Confidence 9999999999999887543
No 127
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.92 E-value=3.7e-24 Score=221.33 Aligned_cols=353 Identities=9% Similarity=0.005 Sum_probs=216.8
Q ss_pred ccCeeecCCCCCCcH----HHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 76 WKGLELIPSENFTSV----SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 76 ~~~i~L~a~en~~~~----~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
.+.|+|..+.+...+ .+.+++.+.+.+... ......|+...+..++++.+.+++.+.+|...+. .+|++|+|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G 106 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKA--ADALCNYDGPQGKTALLNALAVLLRETLGWDIEP--QNIALTNG 106 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHH--HHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG--GGEEEESC
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcc--cceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc--ccEEEeCC
Confidence 467899888776544 455555555543100 0000124445667788888888887777764322 36999999
Q ss_pred HH-HHHHHHHhhcCCCC-----EEEEe-cCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh
Q 010058 152 SP-ANFQVYTALLKPHE-----RIMAL-DLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 152 s~-a~~~~~~all~pGD-----~Vl~~-~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~ 224 (519)
++ |+..++.++++||| +|+++ ++.|.++....... . .+.+......+++.+..++.+|+++++ +.+
T Consensus 107 ~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~- 179 (417)
T 3g7q_A 107 SQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLED---D-LFVSARPNIELLPEGQFKYHVDFEHLH--IGE- 179 (417)
T ss_dssp HHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC--------C-CEEECCCEEEEEGGGEEEEECCGGGCC--CCT-
T ss_pred cHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccch---h-hhccccCcccccCCcccccccCHHHhc--ccc-
Confidence 98 88889999999988 89987 76666554321100 0 112222333333322123568888887 554
Q ss_pred CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhcc---ccCCCCCCCCCCeEEEEcCCCcc-cCCCc
Q 010058 225 RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLV---AAGVIPSPFEYADVVTTTTHKSL-RGPRG 295 (519)
Q Consensus 225 k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~---~~~~~~~p~~~~di~~~S~~K~l-~Gprg 295 (519)
++++|+++ ++| +|...+ +++|.++|++||+++|+|++|..... ..+..+. ....++++.|+||++ +|.|.
T Consensus 180 ~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~G~r~ 258 (417)
T 3g7q_A 180 ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPL-WNPNIILCMSLSKLGLPGSRC 258 (417)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCC-CCTTEEEEEESGGGTCTTSCC
T ss_pred CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccC-CCCCEEEEEechhccCCCcce
Confidence 78998887 777 888877 88889999999999999999854211 1111111 125688899999953 56777
Q ss_pred ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH-hHHH-HHHHHHHHHHHHHHHHH
Q 010058 296 AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP-EYKA-YQEQVLSNSSKFARSLL 373 (519)
Q Consensus 296 G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~-~~~~-~~~~~~~~~~~l~~~L~ 373 (519)
|++++++ ++.+.+........ .+++....+++...++..... ...+ ..+++.++++.+.+.|.
T Consensus 259 G~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (417)
T 3g7q_A 259 GIIIAND--------------KTITAIANMNGIIS-LAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIR 323 (417)
T ss_dssp EEEECCH--------------HHHHHHHHHHHHHC-CCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCH--------------HHHHHHHHhhccee-eCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887 45544433221111 122333333334444432111 1122 55667788888888887
Q ss_pred hc----CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCC----CCCCeEEeccCccccCCCCH
Q 010058 374 ER----GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSA----MVPGGIRMGTPALTSRGFVE 445 (519)
Q Consensus 374 ~~----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~----~~~~~iRi~~~~~ttrg~~~ 445 (519)
+. |+.+..+ ..+.+.|+.+...+.+..++.+.|.++||.++.....+.... ...++|||+++. + +
T Consensus 324 ~~l~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~----~ 396 (417)
T 3g7q_A 324 RYLSEERCLIHKP-EGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--E----P 396 (417)
T ss_dssp HHCCTTTCEEECC-CBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--C----H
T ss_pred HhcccCCceeeCC-CcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--C----H
Confidence 74 5666544 335667777754456788899999899999974321111100 014689999874 5 7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010058 446 EDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 446 ~di~~l~~~l~~~l~~~ 462 (519)
+|++++++.|.++++..
T Consensus 397 ~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 397 DKIEAGVKILAEEIERA 413 (417)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988643
No 128
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.92 E-value=9.9e-24 Score=213.89 Aligned_cols=311 Identities=16% Similarity=0.134 Sum_probs=205.5
Q ss_pred cCeeecCCCCCC--cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~~--~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.|+|..++|+. |+.+ + +.. ..+||.. . ..+++ +.+++++|++++ +|++++|++
T Consensus 30 ~~i~l~~~~~~~~~~~~v--a----~~~--~~~Y~~~------~-~~~lr----~~la~~~~~~~~----~v~~~~G~~~ 86 (356)
T 1fg7_A 30 GDVWLNANEYPTAVEFQL--T----QQT--LNRYPEC------Q-PKAVI----ENYAQYAGVKPE----QVLVSRGADE 86 (356)
T ss_dssp CSEECSSCCCSSCCCCCC--C----CCC--TTSCCCS------S-CHHHH----HHHHHHHTSCGG----GEEEESHHHH
T ss_pred ceEEeeCCCCCCCCCHhH--h----hhh--hccCCCc------c-HHHHH----HHHHHHhCCChH----HEEEcCCHHH
Confidence 468999999864 4454 1 111 1133322 2 24455 777888898764 599999988
Q ss_pred HHHHHHHhhcCCC-CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 ANFQVYTALLKPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 a~~~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++++|| |+|+++++.|.++.. .+...|..+..++ .+ +++.+|+++++++++ ++++|+++
T Consensus 87 ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~--~~~~v~l~ 153 (356)
T 1fg7_A 87 GIELLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGVECRTVP--TL-DNWQLDLQGISDKLD--GVKVVYVC 153 (356)
T ss_dssp HHHHHHHHHCCTTTCEEEECSSSCTHHHH--------HHHHHTCEEEECC--CC-TTSCCCHHHHHTSCT--TEEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEee--CC-CCCCCCHHHHHHHhc--CCCEEEEe
Confidence 8888999999999 999999977766543 1223344444444 44 357899999998886 78999888
Q ss_pred -ccc-ccccccHHHHH---HHHhhcCCEEEehhhhhhhccccCCCCC-CCCCCeEEEEcCCCcc--cCCCcceEEeeccc
Q 010058 233 -ASA-YARLYDYARIR---KVCDKQKAVMLADMAHISGLVAAGVIPS-PFEYADVVTTTTHKSL--RGPRGAMIFFRKGV 304 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~---~ia~~~~~~livD~ah~~g~~~~~~~~~-p~~~~di~~~S~~K~l--~GprgG~i~~~~~~ 304 (519)
++| +|...+.+++. ++|+ +|+++|+|++|............ .....++++.|+||++ +|+|.|++++++
T Consensus 154 ~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-- 230 (356)
T 1fg7_A 154 SPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE-- 230 (356)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--
T ss_pred CCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH--
Confidence 666 78887765554 5555 89999999998743311111100 0013578999999987 577889999977
Q ss_pred ccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC-CEEecCC
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG-YDLVSGG 383 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~ 383 (519)
++.+.+.....+. +++....++..++++......+++..+++.++++++.+.|++.| +..+.+
T Consensus 231 ------------~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~- 294 (356)
T 1fg7_A 231 ------------EVINLLMKVIAPY---PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFD- 294 (356)
T ss_dssp ------------HHHHHHHHHSCSS---CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECC-
T ss_pred ------------HHHHHHHHhcCCC---CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECC-
Confidence 5555555433222 34444444444444321101267788889999999999999986 222233
Q ss_pred CCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
....++++.+. +..++.+.|.++||.++.+ |... ..++++||++. + ++|++++++.|++
T Consensus 295 ~~~~~~~~~~~----~~~~l~~~L~~~gI~v~~~---g~~~-~~~~~iRis~~---~----~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 295 SETNYILARFK----ASSAVFKSLWDQGIILRDQ---NKQP-SLSGCLRITVG---T----REESQRVIDALRA 353 (356)
T ss_dssp CSSSEEEEEET----THHHHHHHHHHTTEECEEC---TTST-TCTTEEEEECC---C----HHHHHHHHHHHHT
T ss_pred CCCeEEEEECC----CHHHHHHHHHHCCEEEEEC---CCCC-CCCCeEEEEeC---C----HHHHHHHHHHHHh
Confidence 23455676663 5677888888899999731 3321 12468999975 3 7899999988865
No 129
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.92 E-value=2e-23 Score=214.10 Aligned_cols=332 Identities=16% Similarity=0.168 Sum_probs=216.0
Q ss_pred ecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHH
Q 010058 81 LIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYT 160 (519)
Q Consensus 81 L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~ 160 (519)
+-.+...+++.+++++.+.+.+.+ |.......+++ +.+++++|.+. .|.++||+.|+..++.
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~---------~~~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~al~ 67 (390)
T 3b8x_A 6 YPLASSTWDDLEYKAIQSVLDSKM---------FTMGEYVKQYE----TQFAKTFGSKY-----AVMVSSGSTANLLMIA 67 (390)
T ss_dssp BCSCCCCCCHHHHHHHHHHHHHTC---------CSSCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHcCC---------CCCChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHH
Confidence 334667789999999999887521 22235555666 78888899863 5888999988888999
Q ss_pred hh-------cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcc
Q 010058 161 AL-------LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGA 233 (519)
Q Consensus 161 al-------l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~ 233 (519)
++ ++|||+|+++.++|.++..... ..|..+..+ +++++++.+|++++++++++ ++++|+++.
T Consensus 68 ~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~--------~~g~~~~~~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 136 (390)
T 3b8x_A 68 ALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQ--------QYGLRVKFV--DIDINTLNIDIESLKEAVTD-STKAILTVN 136 (390)
T ss_dssp HTTSSSSCSCCTTCEEEEESSSCHHHHHHHH--------HTTCEEEEE--CBCTTTCSBCHHHHHHHCCT-TEEEEEEEC
T ss_pred HHHhhhhcCCCCcCEEEECCCCcHHHHHHHH--------HcCCEEEEE--ecCccccCcCHHHHHHHhCc-CCeEEEEEC
Confidence 98 8999999999988877755322 234444444 45655688999999999987 899988862
Q ss_pred ccccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcC--CCcccCCCcceEEeecc-c--cccc
Q 010058 234 SAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGPRGAMIFFRKG-V--KEIN 308 (519)
Q Consensus 234 sn~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~--~K~l~GprgG~i~~~~~-~--~~~~ 308 (519)
.+|...|+++|.++|+++|+++|+|++|+.|....+ ...+. ..|+.++|+ +|.+.+++||+++++++ + .+.+
T Consensus 137 -~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~g~-~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~ 213 (390)
T 3b8x_A 137 -LLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNN-KCAGT-FGLMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLC 213 (390)
T ss_dssp -GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETT-EETTS-SSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHH
T ss_pred -CccChhhHHHHHHHHHHcCCEEEEECcCcccCEECC-ccccc-ccceEEEEccCCCCCccCCceEEEeCCHHHHHHHHH
Confidence 367779999999999999999999999998876532 11100 236666553 45577778899998873 2 1112
Q ss_pred -ccCcc-hhh--h-------HHHHh-hhccc--CCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 010058 309 -KQGQE-VMY--A-------YEDKI-NQAVF--PGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 309 -~~g~~-~~~--~-------~~~~i-~~~~~--~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (519)
..++. ... . ..... ....+ .+. .++++....+++.. + ..+++..++.+++++++.+.|+
T Consensus 214 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-l-----~~l~~~~~~~~~~~~~l~~~L~ 287 (390)
T 3b8x_A 214 IRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ-L-----KKLPRFISVRRKNAEYFLDKFK 287 (390)
T ss_dssp HTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH-H-----HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHH-H-----HHHHHHHHHHHHHHHHHHHHhc
Confidence 11110 000 0 00000 00000 011 12444444444332 3 2467788899999999999999
Q ss_pred hc-CCEEecCCCC--cceeeeeccC-CCCcHHHHHHhhcccCeEEcccccCCCC--C-CC------------------CC
Q 010058 374 ER-GYDLVSGGTE--NHLVLVNLRN-KGIDGSRVEKVLESVHIAANKNTVPGDV--S-AM------------------VP 428 (519)
Q Consensus 374 ~~-g~~~~~~~~~--~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~-~~------------------~~ 428 (519)
++ |+.+..+... .+.+.+.+.. .+.+..++.+.|.+.||.++..+ |+.. . +. ..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (390)
T 3b8x_A 288 DHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIV-TGNFLKNTDVLKYFDYTVHNNVDNAEYLDK 366 (390)
T ss_dssp TCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCST-TSSGGGCHHHHTTCEEEESSCCHHHHHHHH
T ss_pred CCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeeec-CCchhhcchhhhcCCCCCcCCChHHHHHhc
Confidence 87 7776543211 2223344432 14578889999989999998422 1110 1 10 01
Q ss_pred CeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 429 GGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 429 ~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
+.|||+++..+| ++|++++++.|
T Consensus 367 ~~l~l~~~~~~t----~~di~~i~~~l 389 (390)
T 3b8x_A 367 NGLFVGNHQIEL----FDEIDYLREVL 389 (390)
T ss_dssp HEEEEECCSSCC----HHHHHHHHHHT
T ss_pred CEEEeeCCCCCC----HHHHHHHHHhh
Confidence 369999988888 99999999876
No 130
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.92 E-value=1.1e-23 Score=223.42 Aligned_cols=333 Identities=12% Similarity=0.053 Sum_probs=219.3
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhc-CC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALL-KP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all-~p 165 (519)
.|+.+++++.+.+.+.. | .+...|+...+...+++.+.+++.+.+|...+. .+|++++|++ ++..++.+++ +|
T Consensus 107 ~p~~~~~~a~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~~~~ 181 (500)
T 3tcm_A 107 FSADSISRAKQILAMIP--G-RATGAYSHSQGIHGLRDAIASGIASRDGFPANA--DDIFLTDGASPGVHLMMQLLIRNE 181 (500)
T ss_dssp SCHHHHHHHHHHHTTST--T-SCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG--GGEEEESSSHHHHHHHHHHHCCST
T ss_pred CCHHHHHHHHHHHHcCC--C-CcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCc--ccEEEcCCHHHHHHHHHHHHcCCC
Confidence 56667777766665421 1 012234555667788888888888888854322 3689999888 8888889998 89
Q ss_pred CCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhh-----CCcEEEEc-ccc-cc
Q 010058 166 HERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALF-----RPKLIVAG-ASA-YA 237 (519)
Q Consensus 166 GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~-----k~klIi~~-~sn-~g 237 (519)
||+|+++++.|.++.. .+...|..+..++ ++++ ++.+|+++|++++++. ++++|+++ ++| +|
T Consensus 182 gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG 251 (500)
T 3tcm_A 182 KDGILVPIPQYPLYSA--------SIALHGGALVPYY--LNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTG 251 (500)
T ss_dssp TEEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTC
T ss_pred CCEEEEeCCCcHhHHH--------HHHHcCCEEEEEe--cccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCc
Confidence 9999999988876654 2333455444444 4433 5789999999999864 68888877 766 78
Q ss_pred cccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC-------C----CCC-eEEEEcCCCcc---cCCCcceEE
Q 010058 238 RLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP-------F----EYA-DVVTTTTHKSL---RGPRGAMIF 299 (519)
Q Consensus 238 ~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p-------~----~~~-di~~~S~~K~l---~GprgG~i~ 299 (519)
..++ +++|.++|+++|+++|+|++|.......+....+ + ... .+++.|+||++ +|.|+||++
T Consensus 252 ~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~ 331 (500)
T 3tcm_A 252 QVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFE 331 (500)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEE
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEE
Confidence 7765 5667777999999999999976543322111111 0 112 36677999987 488999998
Q ss_pred e---ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh---------cCHhHHHHHHHHHHHHHH
Q 010058 300 F---RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV---------KTPEYKAYQEQVLSNSSK 367 (519)
Q Consensus 300 ~---~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~---------~~~~~~~~~~~~~~~~~~ 367 (519)
+ ++ ++.+.+..... ...+++....++++.++... .....+++.+++.++++.
T Consensus 332 ~~~~~~--------------~~~~~l~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 395 (500)
T 3tcm_A 332 ITGFSA--------------PVREQIYKIAS--VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKA 395 (500)
T ss_dssp EESCCT--------------THHHHHHHHHH--TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCH--------------HHHHHHHHHHh--cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 8 55 44444333221 12345566666655555411 012346677888999999
Q ss_pred HHHHHHhc-CCEEecCCCCcceeeeeccCC----------CCcHHH--HHHhhcccCeEEcccccCCCC-C-CCCCCeEE
Q 010058 368 FARSLLER-GYDLVSGGTENHLVLVNLRNK----------GIDGSR--VEKVLESVHIAANKNTVPGDV-S-AMVPGGIR 432 (519)
Q Consensus 368 l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~----------~~~~~~--~~~~L~~~gI~v~~~~~p~~~-~-~~~~~~iR 432 (519)
+.+.|++. |+.+..+ ..+.+.|+.+..+ +...+. +.++|++.||.+. ||.. + +.+.+++|
T Consensus 396 l~~~L~~~~g~~~~~~-~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~----pg~~f~~~~g~~~iR 470 (500)
T 3tcm_A 396 LEHAFNKLEGITCNEA-EGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVV----PGSGFGQVPGTWHFR 470 (500)
T ss_dssp HHHHHHTSTTEECCCC-CBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECE----ESTTTCCCTTCCBEE
T ss_pred HHHHHhcCCCcEEecC-CeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEE----eCcccCCCCCCCEEE
Confidence 99999998 8887654 2344555443211 122222 3577888999997 5543 2 23456899
Q ss_pred eccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+++. ++ +++++++++.|.++++..
T Consensus 471 is~~--~~----~e~i~~~i~~l~~~~~~~ 494 (500)
T 3tcm_A 471 CTIL--PQ----EDKIPAVISRFTVFHEAF 494 (500)
T ss_dssp EESC--SC----TTTHHHHHHHHHHHHHHH
T ss_pred EEEC--CC----HHHHHHHHHHHHHHHHHH
Confidence 9987 55 689999999999888643
No 131
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.92 E-value=2.1e-23 Score=211.98 Aligned_cols=319 Identities=14% Similarity=0.095 Sum_probs=213.1
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.|+|..++++ +++.+.+++.+.+.+.. +|+. ....+++ +.+++++|++++ +|.+++|++
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~-------~~~~~l~----~~la~~~~~~~~----~v~~~~g~~~ 87 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDCIE--RYPD-------ADYFHLH----QALARHHQVPAS----WILAGNGETE 87 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGGGG--SCCC-------TTCHHHH----HHHHHHHTSCGG----GEEEESSHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHHhh--cCCC-------CCHHHHH----HHHHHHHCcCHH----HEEECCCHHH
Confidence 46889888774 57899999988775421 3332 1234455 777788898764 589999987
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC-CCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE-STGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++ +||+|++.++.|.++... +...|..+..++. ++ +++.+ ++++.+.+.+ ++++|+++
T Consensus 88 al~~~~~~~--~gd~vl~~~p~y~~~~~~--------~~~~g~~~~~v~~--~~~~~~~~-l~~~~~~~~~-~~~~v~i~ 153 (364)
T 1lc5_A 88 SIFTVASGL--KPRRAMIVTPGFAEYGRA--------LAQSGCEIRRWSL--READGWQL-TDAILEALTP-DLDCLFLC 153 (364)
T ss_dssp HHHHHHHHH--CCSEEEEEESCCTHHHHH--------HHHTTCEEEEEEC--CGGGTTCC-CTTHHHHCCT-TCCEEEEE
T ss_pred HHHHHHHHc--CCCeEEEeCCCcHHHHHH--------HHHcCCeEEEEeC--Ccccccch-hHHHHHhccC-CCCEEEEe
Confidence 777777777 789999998777665431 2223444444543 32 22333 4656666654 78988876
Q ss_pred -ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhcccc-CCCCC-CCCCCeEEEEcCCCcc--cCCCcceEE-eec
Q 010058 233 -ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAA-GVIPS-PFEYADVVTTTTHKSL--RGPRGAMIF-FRK 302 (519)
Q Consensus 233 -~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~-~~~~~-p~~~~di~~~S~~K~l--~GprgG~i~-~~~ 302 (519)
++| +|...+ +++|.++|+++|+++|+|++|..+.... ..... .....++++.|+||++ +|.|.|+++ +++
T Consensus 154 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 233 (364)
T 1lc5_A 154 TPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD 233 (364)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCH
Confidence 766 788887 8899999999999999999986543210 11100 0114689999999997 466779999 776
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEec
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVS 381 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 381 (519)
++.+.+.....+ .+++....+++..+++. ...+++..+++.++++.+.+.|++. |+.+..
T Consensus 234 --------------~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 294 (364)
T 1lc5_A 234 --------------AAMARMRRQQMP---WSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYP 294 (364)
T ss_dssp --------------HHHHHHHHHSCT---TCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECC
T ss_pred --------------HHHHHHHHhCCC---CCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECC
Confidence 555555443322 24455555555555543 1345788888999999999999988 887654
Q ss_pred CCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 382 GGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 382 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+ ...++++.+.. +..++.+.|.+.||.++ |+.. +...++++||++. + ++|++++.+.|+++++
T Consensus 295 ~--~g~~~~~~~~~---~~~~l~~~l~~~gi~v~----~g~~~~~~~~~~iRis~~---~----~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 295 G--RANYLLLRCER---EDIDLQRRLLTQRILIR----SCANYPGLDSRYYRVAIR---S----AAQNERLLAALRNVLT 358 (364)
T ss_dssp C--SSSEEEEEESC---TTCCHHHHHHTTTEECE----ECTTSTTCCTTEEEEECC---C----HHHHHHHHHHHHHHC-
T ss_pred C--CCeEEEEECCC---cHHHHHHHHHHCCcEEe----eCcccCCCCCCEEEEEeC---C----HHHHHHHHHHHHHHhh
Confidence 2 33455666532 23457777778899997 4443 2234578999964 3 7899999999988765
Q ss_pred H
Q 010058 461 L 461 (519)
Q Consensus 461 ~ 461 (519)
.
T Consensus 359 ~ 359 (364)
T 1lc5_A 359 G 359 (364)
T ss_dssp -
T ss_pred c
Confidence 3
No 132
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.92 E-value=1.1e-23 Score=232.24 Aligned_cols=301 Identities=14% Similarity=0.078 Sum_probs=214.1
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeee
Q 010058 126 LCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 204 (519)
Q Consensus 126 ~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~ 204 (519)
.+++.+++++|.+. .+.+++|++ +|.+++.++++|||+|++..+.|.+.... +...|..+..++..
T Consensus 209 ~~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~--------~~~~G~~~v~v~~~ 275 (755)
T 2vyc_A 209 ESEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG--------LMLTGAKPVYMVPS 275 (755)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH--------HHHHCCEEEEECCC
T ss_pred HHHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH--------HHHcCCEEEEEeCC
Confidence 34488999999874 488999987 89999999999999999999888776542 23346555555543
Q ss_pred eCCCC--CCC-----CHHHHHHHhhhh-CC--------cEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhcc
Q 010058 205 LDEST--GYI-----DYEQLEKSAALF-RP--------KLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLV 267 (519)
Q Consensus 205 ~d~~~--~~i-----D~d~l~~~i~~~-k~--------klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~ 267 (519)
.+.-+ +.+ |+++|++++++. ++ ++++++.+| +|...|+++|.++|+++|++|++|+||..++.
T Consensus 276 ~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~ 355 (755)
T 2vyc_A 276 RNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_dssp BCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGG
T ss_pred CCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhcc
Confidence 22101 235 999999999752 33 377777445 79999999999999999999999999976533
Q ss_pred ccCC--CCCCCCC--CeE------EEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccH
Q 010058 268 AAGV--IPSPFEY--ADV------VTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHN 336 (519)
Q Consensus 268 ~~~~--~~~p~~~--~di------~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~ 336 (519)
..+. ...++.+ +|+ +++|+||+|+|+++ |+++++++... . + ...++........++|+.
T Consensus 356 ~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~-------i--~-~~~~~~~~~~~~s~sp~~ 425 (755)
T 2vyc_A 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGA-------I--N-FSRFNQAYMMHATTSPLY 425 (755)
T ss_dssp GCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTC-------C--C-HHHHHHHHHHTSCSSCCH
T ss_pred cCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccc-------c--C-HHHHHHHHHHhCCCCHHH
Confidence 3221 1122224 565 99999999999985 78888764100 0 1 112222212223478999
Q ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C---------CEEecCC-----------------------
Q 010058 337 HTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G---------YDLVSGG----------------------- 383 (519)
Q Consensus 337 ~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g---------~~~~~~~----------------------- 383 (519)
..++++.+|++.+...+.+++.++..++++++++.|+++ | ++++.+.
T Consensus 426 ~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (755)
T 2vyc_A 426 AICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTT 505 (755)
T ss_dssp HHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccc
Confidence 999999999998887656788899999999999999886 5 6555431
Q ss_pred --------------------C-----CcceeeeeccCC---------CCcHHHHHHhhcccCeEEcccccCCCCCCCCCC
Q 010058 384 --------------------T-----ENHLVLVNLRNK---------GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPG 429 (519)
Q Consensus 384 --------------------~-----~~~~~~v~~~~~---------~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 429 (519)
. +...+.+.+... |+++.++.+.|+++||.+.+. ..+
T Consensus 506 ~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~---------~~~ 576 (755)
T 2vyc_A 506 VQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT---------TDF 576 (755)
T ss_dssp CGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE---------CSS
T ss_pred hhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec---------CCC
Confidence 0 112333433322 455589999998899998642 246
Q ss_pred eEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 430 GIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 430 ~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.+|+.++..+| ++++++++++|.++.+..
T Consensus 577 ~v~~~~~~g~t----~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 577 QIMFLFSMGVT----RGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp EEEEECCTTCC----TTTTHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCC----HHHHHHHHHHHHHHHHhh
Confidence 79998887777 899999999999987654
No 133
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.92 E-value=1.3e-23 Score=217.14 Aligned_cols=327 Identities=11% Similarity=0.059 Sum_probs=209.1
Q ss_pred ccCeeecCCCC-------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe
Q 010058 76 WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS 148 (519)
Q Consensus 76 ~~~i~L~a~en-------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~ 148 (519)
.+.|+|..++. ++++.|.+++.+...... .+|+ ...+..++++.+.+++....+.+.. .+|++
T Consensus 37 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~Y~------~~~g~~~lr~~la~~~~~~~~~~~~---~~i~~ 106 (413)
T 3t18_A 37 EAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHI-ASYA------PIEGEKDYRKIVIDTLFGPYKPEGY---ISAIA 106 (413)
T ss_dssp GGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHH-HSCC------CTTCCHHHHHHHHHHHHGGGCCSSE---EEEEE
T ss_pred cceEeccccCccCCCCCcCChHHHHHHHHhcCcccc-cCcC------CCCCCHHHHHHHHHHHhcccCcccc---CcEEE
Confidence 36688876652 368889998876443211 1232 2234456776666777666654321 36999
Q ss_pred CCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh---
Q 010058 149 LSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--- 224 (519)
Q Consensus 149 ~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--- 224 (519)
++|++ |+..++.++++|||+|+++++.|.++.. .+...|..+..++ ++++++.+|++++++++++.
T Consensus 107 t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~l~~~~~~ 176 (413)
T 3t18_A 107 TPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRK--------ICEEFGRNFKTFE--FFTDDFAFNIDVYKEAIDEGIRD 176 (413)
T ss_dssp ESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHH--------HHHHHTCEEEEEC--CBCTTSSBCHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhcCCCCEEEECCCCcccHHH--------HHHHhCCeEEEee--ccCCCCCcCHHHHHHHHHHHhhc
Confidence 99988 8888999999999999999977766543 2333455555554 33345789999999998753
Q ss_pred CCc-EEEEc-c-cc-ccccccHHHHH---HHHh------hcCCEEEehhhhhhhccccCCCCCCC----CC--C---eEE
Q 010058 225 RPK-LIVAG-A-SA-YARLYDYARIR---KVCD------KQKAVMLADMAHISGLVAAGVIPSPF----EY--A---DVV 282 (519)
Q Consensus 225 k~k-lIi~~-~-sn-~g~~~d~~~i~---~ia~------~~~~~livD~ah~~g~~~~~~~~~p~----~~--~---di~ 282 (519)
+++ +++++ + +| +|...+.+++. ++|+ ++|++||+|++|. ++...+....++ .. . .++
T Consensus 177 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (413)
T 3t18_A 177 SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYL-EFAGDGDQQRKFFEKFSNLPRNLFVVV 255 (413)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTG-GGSSSSSTTTGGGGGGTTCCTTEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccc-cccCChhhHHHHHHHHhhcCCCeeEEE
Confidence 677 67776 6 67 88888866555 5555 8999999999963 333322111111 01 1 277
Q ss_pred EEcCCCcc--cCCCcceEEe---ecccccccccCcchhhhHHHHhhhccc---CCCCCCccHHHHHHHHHHHHHhc----
Q 010058 283 TTTTHKSL--RGPRGAMIFF---RKGVKEINKQGQEVMYAYEDKINQAVF---PGLQGGPHNHTISGLAVALKQVK---- 350 (519)
Q Consensus 283 ~~S~~K~l--~GprgG~i~~---~~~~~~~~~~g~~~~~~~~~~i~~~~~---~~~~g~~~~~~iaal~~al~~~~---- 350 (519)
+.|+||++ +|+|.|++++ ++ ++.+.+..... .+..++++.....++..+++...
T Consensus 256 ~~S~sK~~~~~G~riG~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 321 (413)
T 3t18_A 256 AFSMSKSHTAYGLRSGAAVGISSSK--------------EIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIY 321 (413)
T ss_dssp EEEHHHHTTCGGGCCEEEEEEESCH--------------HHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHH
T ss_pred EEecCccCCCcCcCcEEEEEecCCH--------------HHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHH
Confidence 78999976 5778899998 55 44444332210 00012344444444444443211
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCe
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 430 (519)
....++..+++.++++.+.+.|.+.|+.+..+. .+.+.|+++ .+..++.+.|.++||.+. || +++
T Consensus 322 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~~~----~~~~~~~~~l~~~gv~v~----~g------~~~ 386 (413)
T 3t18_A 322 EQELVDLRNMLKSRADVFVTAAKENKLTMIPYF-GGFFTFIPT----DKAFDIVKDLEKENIFTI----PS------AKG 386 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCC-SSSCEEEEC----SCHHHHHHHHHHTTEECE----EC------SSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCC-ceEEEEeCC----CCHHHHHHHHHhCCEEEe----cC------CCc
Confidence 112345677889999999999999998876542 344555554 257788888989999997 44 468
Q ss_pred EEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 431 iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+||++...++ +++ ++.|.++++
T Consensus 387 iRis~~~~~~-----~~~---l~~l~~~l~ 408 (413)
T 3t18_A 387 IRVAICGVGE-----EKI---PKLVQRLAF 408 (413)
T ss_dssp EEECTTTSCG-----GGH---HHHHHHHHH
T ss_pred eEEEEeeCCH-----HHH---HHHHHHHHH
Confidence 9999886555 444 555555554
No 134
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.92 E-value=4.2e-24 Score=222.12 Aligned_cols=335 Identities=12% Similarity=0.071 Sum_probs=223.6
Q ss_pred ccCeeecCCCC-C--CcHHH--HHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc-CCCCCCCcce---E
Q 010058 76 WKGLELIPSEN-F--TSVSV--MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAF-QLDPAKWGVN---V 146 (519)
Q Consensus 76 ~~~i~L~a~en-~--~~~~V--~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~-g~~~~~~~~~---V 146 (519)
.+.|+|..+++ . .++.+ ++++.+.+......+ |+...+..++++.+.+++.+.+ ++++ .+ |
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~~----~~~~~i 116 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFP------YAPPQGIEELRDLWQQKMLRDNPELSI----DNMSRP 116 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSS------CCCTTCCHHHHHHHHHHHHHHCTTCCG----GGBCCC
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccc------cCCCCCCHHHHHHHHHHHhccCcccCC----CccceE
Confidence 45788988877 3 25555 777766553311112 3333345667755555555443 5554 35 8
Q ss_pred EeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceee-eeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh
Q 010058 147 QSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISA-VSIFFETMPYRLDESTGYIDYEQLEKSAALF 224 (519)
Q Consensus 147 ~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~-~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~ 224 (519)
++++|++ |+..++.++++|||+|++.++.|.++... +.. .|..+..++ .+++++.+|++++++++++.
T Consensus 117 ~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~l~~~ 186 (430)
T 2x5f_A 117 IVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLV--------FNTRNGANLQTYP--IFDKDGHYTTDSLVEALQSY 186 (430)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHH--------HTTTTCCEEEEEC--CBCTTSCBCSHHHHHHHHHC
T ss_pred EEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHH--------HHHhcCCeEEEEe--ccCccCCcCHHHHHHHHHhc
Confidence 8899887 88889999999999999999887766431 222 344444444 44333679999999998753
Q ss_pred --CCcEEEEc-ccc-cccccc---HHHHHHHHhh-----cCCEEEehhhhhhhccccCCCCC---CC---CCC---eEEE
Q 010058 225 --RPKLIVAG-ASA-YARLYD---YARIRKVCDK-----QKAVMLADMAHISGLVAAGVIPS---PF---EYA---DVVT 283 (519)
Q Consensus 225 --k~klIi~~-~sn-~g~~~d---~~~i~~ia~~-----~~~~livD~ah~~g~~~~~~~~~---p~---~~~---di~~ 283 (519)
++++|+++ ++| +|...+ +++|.++|++ +|+++|+|++|............ .+ ... ++++
T Consensus 187 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (430)
T 2x5f_A 187 NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRL 266 (430)
T ss_dssp CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEE
T ss_pred CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEE
Confidence 67888877 766 788777 8899999999 99999999997643321110111 01 134 6888
Q ss_pred EcCCCcc--cCCCcceEEe---ecccccccccCcchhhhHHHHhhhcccC---CCCCCccHHHHHHHHHHHH-Hhc-CHh
Q 010058 284 TTTHKSL--RGPRGAMIFF---RKGVKEINKQGQEVMYAYEDKINQAVFP---GLQGGPHNHTISGLAVALK-QVK-TPE 353 (519)
Q Consensus 284 ~S~~K~l--~GprgG~i~~---~~~~~~~~~~g~~~~~~~~~~i~~~~~~---~~~g~~~~~~iaal~~al~-~~~-~~~ 353 (519)
.|+||++ +|.|.|++++ ++ ++.+.+...... ....+++....+++..+++ ... ...
T Consensus 267 ~s~sK~~~~~G~riG~~~~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 332 (430)
T 2x5f_A 267 DGATKEFFAWGFRVGFMTFGTSDQ--------------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKE 332 (430)
T ss_dssp EEHHHHTTCGGGCCEEEEEBCCCH--------------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHH
T ss_pred EecccCCCCCCCCeEEEEEecCCH--------------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHH
Confidence 9999987 5667799999 66 444444322111 0123456666666666766 320 112
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcc-cCeEEcccccCCCCCCCCC
Q 010058 354 YKAYQEQVLSNSSKFARSLL----ERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLES-VHIAANKNTVPGDVSAMVP 428 (519)
Q Consensus 354 ~~~~~~~~~~~~~~l~~~L~----~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~ 428 (519)
.++..+++.++++.+.+.|+ +.|+.+..+ ..+.++++.+. +.+..++.+.|.+ +||.+. || ..
T Consensus 333 ~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~-~~g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~----~g-----~~ 400 (430)
T 2x5f_A 333 IEQNIQTLKERYEVTKEVVYADQYHSHWQAYDF-NSGYFMAIKVH--DVDPEALRKHLIDKYSIGVI----AL-----NA 400 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCC-CBSSEEEEEES--SSCHHHHHHHHHHHHCEECE----EC-----SS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCC-CceEEEEeCCC--CCCHHHHHHHHHHhCCEEEe----cC-----CC
Confidence 33478888999999999998 667776553 23445677765 5677788888876 999996 44 24
Q ss_pred CeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 429 GGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 429 ~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+++||+++. ++ ++|++++++.|.++++.
T Consensus 401 ~~iRis~~~-~~----~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 401 TDIRIAFSC-VE----KDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp SEEEEEGGG-SC----GGGHHHHHHHHHHHHHH
T ss_pred CeEEEEEec-CC----HHHHHHHHHHHHHHHHh
Confidence 689999885 35 79999999999998864
No 135
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.92 E-value=2.3e-24 Score=226.01 Aligned_cols=338 Identities=12% Similarity=0.119 Sum_probs=215.0
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCC-CCCCC------CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH--
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYP-GARYY------GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-- 153 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p-~~~~y------~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-- 153 (519)
++..+.++.|.+++.......|..+.. ...+. .+.....++++.+++++++++|+++ . +.+++|++
T Consensus 87 aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~----~-~~~t~g~te~ 161 (456)
T 2z67_A 87 VRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNV----H-AIATPISTGM 161 (456)
T ss_dssp EECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCC----E-EEEESSCHHH
T ss_pred cccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCC----C-EEEeCcHHHH
Confidence 344467778888876643222211111 00000 1112366788889999999999986 3 66777665
Q ss_pred HHHHHHHhhcC--CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHh-hh---hCCc
Q 010058 154 ANFQVYTALLK--PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSA-AL---FRPK 227 (519)
Q Consensus 154 a~~~~~~all~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i-~~---~k~k 227 (519)
+|.+++.++.. +||.|++++.+|.+... .+...|..+..+++...++++.+|+++|++++ ++ .++.
T Consensus 162 a~~~al~~~~~~~~~~~vi~~~~~h~s~~~--------~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 233 (456)
T 2z67_A 162 SISLCLSAARKKYGSNVVIYPYASHKSPIK--------AVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRP 233 (456)
T ss_dssp HHHHHHHHHHHHHCCCEEEEECCCCHHHHH--------HHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCcHHHHH--------HHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeE
Confidence 56656666533 78889988877776433 22334655556554221256889999999999 42 3677
Q ss_pred EEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhh---hhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEee
Q 010058 228 LIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHI---SGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFR 301 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~---~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~ 301 (519)
+|+++ ++| +|...|+++|.++|+++|+++++|+||. .|..+......+. ++|++++|+||++.+|.| |+++++
T Consensus 234 ~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~-~~D~~~~s~hK~~~~p~g~G~l~~~ 312 (456)
T 2z67_A 234 CVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-RVDAVVSSSDKNLLTPIGGGLVYST 312 (456)
T ss_dssp EEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-CCSEEEEEHHHHHCCCSSCEEEEES
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-CCCEEEEcCCCCcCCCCCeEEEEEc
Confidence 77666 545 8999999999999999999999998765 3332222110011 589999999999877665 999996
Q ss_pred cccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----CC
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER----GY 377 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~ 377 (519)
++ ++.+.+... +.+ ........++.+++..+...++++..++..++++++.+.|++. |+
T Consensus 313 ~~-------------~~~~~l~~~-~~g---~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~ 375 (456)
T 2z67_A 313 DA-------------EFIKEISLS-YPG---RASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGG 375 (456)
T ss_dssp CH-------------HHHHHHHTT-SCS---CBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CH-------------HHHhhcCcC-CCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence 53 455544322 222 2111124445556666556678899999999999999999987 87
Q ss_pred EEecCCCCcceeeeeccCCCCcHHHHHHhhcccCe---EEcccc--cCCCC-CCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 378 DLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHI---AANKNT--VPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 378 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI---~v~~~~--~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
.++.+. .++++.+...+. ..++.+.|.+.|| .+.... .+|.. .....+++|+++...++ ++|++++
T Consensus 376 ~v~~~~---~~v~~~~~~~~~-~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t----~eeid~~ 447 (456)
T 2z67_A 376 KFLDVE---SPIASCISVNSD-PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVR----TEDIVNS 447 (456)
T ss_dssp CBCCCC---CSSEEEEECSSC-HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCC----HHHHHHH
T ss_pred EecCCC---CeEEEEEecccH-HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCC----HHHHHHH
Confidence 665432 344455421222 3567888877776 231000 00111 11224689999887777 8999999
Q ss_pred HHHHHHHH
Q 010058 452 AEFFDAAV 459 (519)
Q Consensus 452 ~~~l~~~l 459 (519)
++.|++++
T Consensus 448 l~~L~~~~ 455 (456)
T 2z67_A 448 VSKLEKIL 455 (456)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHHh
Confidence 99998654
No 136
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.92 E-value=7.3e-24 Score=223.58 Aligned_cols=349 Identities=12% Similarity=0.042 Sum_probs=220.8
Q ss_pred CCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-------cceEEeCCcHHHH
Q 010058 83 PSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKW-------GVNVQSLSGSPAN 155 (519)
Q Consensus 83 a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~-------~~~V~~~sGs~a~ 155 (519)
++.+.++..+.+.+.+.+... ...|.......++|+.+.+++++++|.+.+.+ +..+++++||.+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~n~~-------~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an 158 (481)
T 4e1o_A 86 PALTSWPSLLGDMLADAINCL-------GFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSEST 158 (481)
T ss_dssp CCCCCHHHHHHHHHHHHHCCC-------CSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCcc-------cCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHH
Confidence 333334445555665555431 12244557788999999999999999975311 1235555555588
Q ss_pred HHHHHhhcC-------------------CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHH
Q 010058 156 FQVYTALLK-------------------PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQ 216 (519)
Q Consensus 156 ~~~~~all~-------------------pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~ 216 (519)
+.++.+..+ |++.|++.+..|.+.... +.+.|..++.++ .+ +++.+|+++
T Consensus 159 ~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~--------~~~~g~~~~~v~--~~-~~~~~d~~~ 227 (481)
T 4e1o_A 159 LIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKA--------GLISLVKMKFLP--VD-DNFSLRGEA 227 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHH--------HHHHTCEEEEEC--CC-TTSCCCHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHH--------HHhCCCceEEEE--cC-CCCcCCHHH
Confidence 877766532 678999998877765442 233455555555 44 568999999
Q ss_pred HHHHhhhhC-----CcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC---CCCCCCeEEEEcC
Q 010058 217 LEKSAALFR-----PKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP---SPFEYADVVTTTT 286 (519)
Q Consensus 217 l~~~i~~~k-----~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~---~p~~~~di~~~S~ 286 (519)
|++++++.+ |.+|+++ +++ +|...|+++|+++|++||+++++|+||..+........ ..++.+|++++++
T Consensus 228 Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~ 307 (481)
T 4e1o_A 228 LQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNP 307 (481)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECH
T ss_pred HHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEECh
Confidence 999997632 6667666 444 89999999999999999999999999877654322111 1223579999999
Q ss_pred CCcccCCCc-ceEEeeccccccc-cc-Ccchhh--hHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHH
Q 010058 287 HKSLRGPRG-AMIFFRKGVKEIN-KQ-GQEVMY--AYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQV 361 (519)
Q Consensus 287 ~K~l~Gprg-G~i~~~~~~~~~~-~~-g~~~~~--~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~ 361 (519)
||++.+|.+ |+++++++..+.. .. ...... ......+.. ....+++.. ....++.+++..+...++++..++.
T Consensus 308 hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~-~~~~~~~r~-~~~l~~~~al~~~g~~g~~~~~~~~ 385 (481)
T 4e1o_A 308 SKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFM-HWQIPLSRR-FRSVKLWFVIRSFGVKNLQAHVRHG 385 (481)
T ss_dssp HHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGG-GGSSSSCCC-CTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcc-cccccCCCC-ccHHHHHHHHHHhHHHHHHHHHHHH
Confidence 999999988 8888877421110 00 000000 000000000 001112211 1234455666666667889999999
Q ss_pred HHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcc-c
Q 010058 362 LSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPAL-T 439 (519)
Q Consensus 362 ~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~-t 439 (519)
.++++++.+.|++. |++++.+. ..+++++.+...+....++.+.|.+.|+.+-. |+. ..+...+|+++... +
T Consensus 386 ~~~a~~l~~~L~~~~g~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~--~~g~~~lR~~~~~~~t 459 (481)
T 4e1o_A 386 TEMAKYFESLVRNDPSFEIPAKR-HLGLVVFRLKGPNSLTENVLKEIAKAGRLFLI---PAT--IQDKLIIRFTVTSQFT 459 (481)
T ss_dssp HHHHHHHHHHHHTCTTEECCSCC-CSSEEEEEESSCHHHHHHHHHHHHHHCSSBCE---EEE--ETTEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCCeEEecCC-ceeEEEEEeCCchHHHHHHHHHHHhCCeEEEE---eeE--ECCEEEEEEEeCCCCC
Confidence 99999999999998 89887543 33455555433222245677777777744311 211 11245799996544 4
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 010058 440 SRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 440 trg~~~~di~~l~~~l~~~l~~ 461 (519)
+ ++|++++++.|+++++.
T Consensus 460 t----~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 460 T----RDDILRDWNLIRDAATL 477 (481)
T ss_dssp C----HHHHHHHHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHHHHHH
Confidence 6 89999999999988764
No 137
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.92 E-value=3.7e-23 Score=210.79 Aligned_cols=295 Identities=15% Similarity=0.100 Sum_probs=202.0
Q ss_pred hhHHHHHHHHHHHHHHHc-CCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 118 EYIDMAESLCQKRALDAF-QLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~-g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
.+..+++ +.+++++ +++++ +|++++|++ |+..++.++++|||+|++.++.|.++... +...|
T Consensus 63 ~g~~~l~----~~la~~~~~~~~~----~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~--------~~~~g 126 (375)
T 3op7_A 63 EGSPAFK----KSVSQLYTGVKPE----QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDI--------PKSLG 126 (375)
T ss_dssp TCCHHHH----HHHHTTSSSCCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHH--------HHHTT
T ss_pred CChHHHH----HHHHHHhccCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHH--------HHHcC
Confidence 4445666 6677776 45653 588888877 99989999999999999999887665432 22335
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAG 270 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~ 270 (519)
..+..++++. .+++.+|++++++++++ ++++|+++ ++| +|...| +++|.++|++||+++|+|++|...... +
T Consensus 127 ~~~~~v~~~~-~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~-~ 203 (375)
T 3op7_A 127 AEVDLWQIEE-ENGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL-D 203 (375)
T ss_dssp CEEEEEEEEG-GGTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS-C
T ss_pred CEEEEEeccc-cCCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc-C
Confidence 5555555432 23567899999999986 89999988 556 788888 999999999999999999997643221 1
Q ss_pred CCCCC--CCCCeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHH
Q 010058 271 VIPSP--FEYADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVAL 346 (519)
Q Consensus 271 ~~~~p--~~~~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al 346 (519)
. +.. ....++++.|++|++ +|.|+|++++++ ++.+.+......... +++....++...++
T Consensus 204 ~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--------------~l~~~~~~~~~~~~~-~~~~~~~~~~~~~l 267 (375)
T 3op7_A 204 V-PSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANH--------------QVTDILRDYRDYTMI-CAGVFDDLVAQLAL 267 (375)
T ss_dssp C-CCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCH--------------HHHHHHTTTGGGTTS-CCCHHHHHHHHHHH
T ss_pred C-CchhhhcCCEEEEeEChhhcCCcccceEEEEeCH--------------HHHHHHHHHHhhhcc-CCCcHHHHHHHHHH
Confidence 1 100 013568889999987 477789999976 566655443322222 33444444444556
Q ss_pred HHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhh-cccCeEEcccccCCCCC
Q 010058 347 KQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVL-ESVHIAANKNTVPGDVS 424 (519)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~ 424 (519)
+.. ....++..+++.++++.+.+.|++. ++.++.+ ....+.++.+.. +.+..++.+.| +++||.+. |+...
T Consensus 268 ~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~ll~~~gi~v~----~g~~~ 340 (375)
T 3op7_A 268 AHY-QEILERNRHILEENLAILDQWIEEEPLVSYIRP-AVVSTSFVKIAV-DMPMEDFCLQLLQEHGVLLV----PGNRF 340 (375)
T ss_dssp HTH-HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCC-SSSSCEEEEECC-SSCHHHHHHHHHHHHCEECE----EGGGG
T ss_pred hcc-HHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC-CCeEEEeEEcCC-CCCHHHHHHHHHHhCCEEEe----Chhhh
Confidence 542 2235677778899999999999987 6776554 233455555543 44666766655 78999997 33321
Q ss_pred CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 425 AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 425 ~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
..++++|+++.. + ++++++.++.|.++++.
T Consensus 341 -~~~~~iRi~~~~--~----~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 341 -ERDGYVRLGFAC--E----QETLIKGLEKLSQFLRR 370 (375)
T ss_dssp -TCTTEEEECCCS--C----HHHHHHHHHHHHHHHGG
T ss_pred -CCCCeEEEEecC--C----HHHHHHHHHHHHHHHHH
Confidence 125789999653 3 58899999999988863
No 138
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.91 E-value=4.8e-23 Score=210.30 Aligned_cols=322 Identities=15% Similarity=0.126 Sum_probs=196.1
Q ss_pred cCeeecCC--CCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-
Q 010058 77 KGLELIPS--ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP- 153 (519)
Q Consensus 77 ~~i~L~a~--en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~- 153 (519)
+.+++..+ ..++++.|++++. + + + +. ..+++..++.+++++|+++.+ ++++++|++
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~----~-~--~--------~~---~~~~~~~~~~~a~~~g~~~~~---~~~~~~ggt~ 87 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLN----T-Y--I--------GS---SYFAEKVNEYGLKHLGGDEND---KCVGFNRTSS 87 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHT----S-T--T--------HH---HHHHHHHHHHHHHHHTCCTTE---EEEEESSHHH
T ss_pred ceeeecccCCCCCCCHHHHHHHH----H-h--c--------Cc---hHHHHHHHHHHHHHhCCCCcc---eEEEEcChHH
Confidence 46776654 3467999999986 1 2 1 11 234456667778899984211 355555555
Q ss_pred HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcE-EEEc
Q 010058 154 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKL-IVAG 232 (519)
Q Consensus 154 a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~kl-Ii~~ 232 (519)
++..++.++ |||+|+++++.|++|..... .+...|..+..+ .|+++++++ ++ ++++ |+++
T Consensus 88 a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~-----~~~~~g~~~~~v----------~d~~~l~~~-~~-~~~~~v~~~ 148 (374)
T 2aeu_A 88 AILATILAL--KPKKVIHYLPELPGHPSIER-----SCKIVNAKYFES----------DKVGEILNK-ID-KDTLVIITG 148 (374)
T ss_dssp HHHHHHHHH--CCSEEEEECSSSSCCTHHHH-----HHHHTTCEEEEE----------SCHHHHHTT-CC-TTEEEEEEC
T ss_pred HHHHHHHhC--CCCEEEEecCCCCccHHHHH-----HHHHcCcEEEEe----------CCHHHHHhc-CC-CccEEEEEc
Confidence 888888877 99999999988877654211 112234333332 378999887 54 8999 8887
Q ss_pred -ccc-cc-ccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CCeEEEEcCCCcccCCCcceEEeeccccccc
Q 010058 233 -ASA-YA-RLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 308 (519)
Q Consensus 233 -~sn-~g-~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~S~~K~l~GprgG~i~~~~~~~~~~ 308 (519)
++| +| ...++++|.++|++||+++|+|++|..+........+++. ++|++++|+||+|+||++|++++++
T Consensus 149 ~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~------ 222 (374)
T 2aeu_A 149 STMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKK------ 222 (374)
T ss_dssp BCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEH------
T ss_pred cCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECH------
Confidence 656 56 7889999999999999999999998765310111111111 5799999999999999999999988
Q ss_pred ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHH----HHHHHHHHHhc----CCEEe
Q 010058 309 KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSN----SSKFARSLLER----GYDLV 380 (519)
Q Consensus 309 ~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~----~~~l~~~L~~~----g~~~~ 380 (519)
++.+.+...... ..++++....+++..+++......++...++.+.. ++.|.+.|.+. |+.+.
T Consensus 223 --------~~~~~l~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~ 293 (374)
T 2aeu_A 223 --------ELVDKIYIEGTK-FGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYE 293 (374)
T ss_dssp --------HHHHHHHHHHHT-TTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEE
T ss_pred --------HHHHHHHHhhcc-ccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCccee
Confidence 555554432221 12345566666666777764211222222222222 34444545442 45543
Q ss_pred cCCCCcceeee-eccCCCCc---HHHH-HHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 381 SGGTENHLVLV-NLRNKGID---GSRV-EKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 381 ~~~~~~~~~~v-~~~~~~~~---~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
..+. +.++++ +... ..+ ..++ .+.|+++||.++ |+...+...+++||++..... .+.++++++++|
T Consensus 294 ~~~~-g~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gV~v~----~g~~~~~~~~~lRi~~~~~~~---~~~~l~~l~~~l 364 (374)
T 2aeu_A 294 RTPT-GFVIKRVYKDD-TINIKKLIEIGFNLLKNYGIITI----TVAGMPGASKSLRIDLTSRDA---ERIDDNYIIKAI 364 (374)
T ss_dssp ECSS-EEEEEEEESSH-HHHHHHHHHHHHHHHHHHCEECS----TTSSSCSSCCSEEEETTSGGG---GGSCHHHHHHHH
T ss_pred eCCc-eEEEEeecccc-cccccchHHHHHHHHHhCCEEEe----cCCCCCCCCCeEEEEcCCchH---HHHHHHHHHHHH
Confidence 3323 233332 2211 000 1113 356677999996 443322345689999764332 144589999999
Q ss_pred HHHHHHH
Q 010058 456 DAAVKLA 462 (519)
Q Consensus 456 ~~~l~~~ 462 (519)
+++++..
T Consensus 365 ~~~l~~~ 371 (374)
T 2aeu_A 365 VESIKMA 371 (374)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888653
No 139
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.91 E-value=1.6e-23 Score=215.78 Aligned_cols=336 Identities=14% Similarity=0.156 Sum_probs=205.8
Q ss_pred ccCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH--cC-CCCCCCcceEEeCC
Q 010058 76 WKGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA--FQ-LDPAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~--~g-~~~~~~~~~V~~~s 150 (519)
.+.|+|..+++ ++++.|.+++.+.+.+... ..+...|+...+..+++ +.++++ +| ++++ +|.+++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~y~~~~g~~~lr----~~la~~l~~g~~~~~----~v~~~~ 102 (400)
T 3asa_A 33 HTVINLSIGDTTQPLNASVAEAFASSIARLSS--PTTCRGYGPDFGLPALR----QKLSEDFYRGFVDAK----EIFISD 102 (400)
T ss_dssp SCCEECSSCCCCCCCCHHHHHHHHHHHHHHTS--SSCCCCCCCTTCCHHHH----HHHHHTTSTTSSCGG----GEEEES
T ss_pred CceEeccCCCCCCCCCHHHHHHHHHHHhcccc--cccccCCCCCCCCHHHH----HHHHHHHHcCCCCHH----HEEEcc
Confidence 35688887766 3588999999988765210 00112233333445666 556666 57 5553 599999
Q ss_pred cHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee-eEEEeeeeCCC-CCCCCHHHHHHHhhhhCCc
Q 010058 151 GSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF-FETMPYRLDES-TGYIDYEQLEKSAALFRPK 227 (519)
Q Consensus 151 Gs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~-~~~v~~~~d~~-~~~iD~d~l~~~i~~~k~k 227 (519)
|++ ++.. +..+++|||+|++.++.|.++... +...|.. +..++. +++ +...|+++ + .+++
T Consensus 103 G~~~al~~-~~~~~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~~~~--~~~~~~~~~l~~----~--~~~~ 165 (400)
T 3asa_A 103 GAKVDLFR-LLSFFGPNQTVAIQDPSYPAYLDI--------ARLTGAKEIIALPC--LQENAFFPEFPE----D--THID 165 (400)
T ss_dssp CHHHHHHH-HHHHHCSSCEEEEEESCCHHHHHH--------HHHTTCSEEEEEEC--CGGGTTCCCCCT----T--CCCS
T ss_pred ChHHHHHH-HHHHcCCCCEEEECCCCcHHHHHH--------HHHcCCcceEeccc--chhcCcccChhh----c--cCcc
Confidence 988 6664 456679999999999877665431 2223433 444443 322 23344332 1 3789
Q ss_pred EEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC---CC---CCeEEEEcCCCcc--cCCC
Q 010058 228 LIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP---FE---YADVVTTTTHKSL--RGPR 294 (519)
Q Consensus 228 lIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p---~~---~~di~~~S~~K~l--~Gpr 294 (519)
+|+++ ++| +|...+ +++|.++|+++|+++|+|++|... ...+..+.+ ++ ..++++.|++|++ +|.|
T Consensus 166 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~Glr 244 (400)
T 3asa_A 166 ILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTF-ISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIR 244 (400)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGG-CCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCC
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhh-hcCCCCCCchhhCCCCCCceEEEecchhhcCCcchh
Confidence 99887 666 787776 567888999999999999998632 111111111 11 2458899999987 5778
Q ss_pred cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh
Q 010058 295 GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE 374 (519)
Q Consensus 295 gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (519)
.|+++++++... ..+. + ...+.........++++....+++..+++.. .+++..+++.++++.+.+.|++
T Consensus 245 iG~~~~~~~~~~--~~~~----~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~ 314 (400)
T 3asa_A 245 LGWTVIPQELTY--ADGH----F-VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLA 314 (400)
T ss_dssp CEEEECCTTCBC--TTSC----B-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEeeChhhcc--chhh----h-HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHH
Confidence 899999874310 0000 0 1111110000011345555666666666653 3567788899999999999999
Q ss_pred cCCEEecCCCCcceeeee-ccCCCCcHHHHHHhh-cccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 375 RGYDLVSGGTENHLVLVN-LRNKGIDGSRVEKVL-ESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 375 ~g~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
.|+.+..+ ....++++. +. .+.+..++.+.| +++||.+.. |.. ++...+++||++ .++ +++++++
T Consensus 315 ~g~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~~----g~~f~~~~~~~iRis~--~~~----~e~i~~~ 382 (400)
T 3asa_A 315 TGFEVFGG-EHAPYLWVKPTQ-ANISDRDLFDFFLREYHIAITP----GIGFGRSGSGFVRFSS--LGK----REDILAA 382 (400)
T ss_dssp TTCEEEEC-SSSSEEEEECCC-TTCCTTTHHHHHHHHHSEECEE----GGGGCGGGTTCEEEEC--CSC----HHHHHHH
T ss_pred CCCeeeCC-CCceEEEEeccC-CCCCHHHHHHHHHHhCCEEEeC----hhHhCCCCCCEEEEEe--eCC----HHHHHHH
Confidence 89887754 234566777 43 344555565555 567999973 332 122356899993 455 8999999
Q ss_pred HHHHHHHHHH
Q 010058 452 AEFFDAAVKL 461 (519)
Q Consensus 452 ~~~l~~~l~~ 461 (519)
++.|.++++.
T Consensus 383 l~~l~~~~~~ 392 (400)
T 3asa_A 383 CERLQMAPAL 392 (400)
T ss_dssp HHHHHC----
T ss_pred HHHHHHHHHh
Confidence 9999888753
No 140
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.91 E-value=2.8e-23 Score=215.53 Aligned_cols=356 Identities=15% Similarity=0.079 Sum_probs=222.1
Q ss_pred hhhhhcCHHHHHHHHHHHHhcccCeeecCCCCC-----CcHHHHHHHhhHh-hhccCCCCCCCCCCCCchhHHHHHHHHH
Q 010058 55 APLEEIDPEIADIIELEKARQWKGLELIPSENF-----TSVSVMQAVGSVM-TNKYSEGYPGARYYGGNEYIDMAESLCQ 128 (519)
Q Consensus 55 ~~l~~~~~~~~~~~~~e~~~~~~~i~L~a~en~-----~~~~V~ea~~~~l-~~~~~~g~p~~~~y~~~~~~~~le~~~~ 128 (519)
+.+......++....+... +...|+|..+++. +++.+++++.+.+ ... +. ....|+...+..+++
T Consensus 12 ~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~---~~-~~~~Y~~~~G~~~lr---- 82 (422)
T 3d6k_A 12 ARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKD---GV-DCRNYGGLLGIADIR---- 82 (422)
T ss_dssp ------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTT---CC-BTTSSCCSSCCHHHH----
T ss_pred HHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhcc---ch-hhhCCCCCCCCHHHH----
Confidence 4455667777777666543 3456899888884 3446666665432 110 00 012244444455666
Q ss_pred HHHHHHcCCCCCCCcceEEeCCcHH-HH--HHHHHhhcCC------------CCEEEEecCCCcccccccccccCCceee
Q 010058 129 KRALDAFQLDPAKWGVNVQSLSGSP-AN--FQVYTALLKP------------HERIMALDLPHGGHLSHGYQTDTKKISA 193 (519)
Q Consensus 129 ~~~~~~~g~~~~~~~~~V~~~sGs~-a~--~~~~~all~p------------GD~Vl~~~~~~~~~~~~~~~~~~~~v~~ 193 (519)
+.++++++++++ +|++|+|++ ++ ..++.++.++ ||+|++.++.|.++.. .+..
T Consensus 83 ~~ia~~~~~~~~----~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~--------~~~~ 150 (422)
T 3d6k_A 83 ELWAEALGLPAD----LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFT--------ITEH 150 (422)
T ss_dssp HHHHHHHTCCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------HHHH
T ss_pred HHHHHHhCCChh----HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHH--------HHHH
Confidence 666777788874 599999998 65 4456677666 3579999977766543 2233
Q ss_pred eeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE-c-ccc-ccccccHH---HHHHHHh-hcCCEEEehhhhhh-h
Q 010058 194 VSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA-G-ASA-YARLYDYA---RIRKVCD-KQKAVMLADMAHIS-G 265 (519)
Q Consensus 194 ~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~-~-~sn-~g~~~d~~---~i~~ia~-~~~~~livD~ah~~-g 265 (519)
.|..+..++ .+++ + +|++++++.+++.++++|++ + ++| +|...+.+ +|.++|+ ++|+++|+|++|.. +
T Consensus 151 ~g~~~~~v~--~~~~-g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~ 226 (422)
T 3d6k_A 151 FGFEMINVP--MTDE-G-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHT 226 (422)
T ss_dssp HTCEEEEEE--EETT-E-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred cCCEEEecC--CCCC-C-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccc
Confidence 455555555 4432 3 99999999997557898884 4 666 88888766 7777787 89999999999874 2
Q ss_pred ccccCCCCCCC---------CCCeEEEEcCCCc-ccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCcc
Q 010058 266 LVAAGVIPSPF---------EYADVVTTTTHKS-LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPH 335 (519)
Q Consensus 266 ~~~~~~~~~p~---------~~~di~~~S~~K~-l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~ 335 (519)
+...+....++ ...++++.|++|+ ++|+|.|++++++ ++.+.+........ .+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~--------------~l~~~l~~~~~~~~-~~~~ 291 (422)
T 3d6k_A 227 LSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK--------------ENIEWYASHANVRG-IGPN 291 (422)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH--------------HHHHHHHHHHHHHC-SCCC
T ss_pred cCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH--------------HHHHHHHHHHHhhc-CCCC
Confidence 32221111111 2457889999995 4677889999987 45554443221111 2334
Q ss_pred HHHHHHHHHHHHHhc--CHhHHHHHHHHHHHHHHHHHHHHh----cC-CEEecCCCCcceeeeeccCCCCcHHHHHHhhc
Q 010058 336 NHTISGLAVALKQVK--TPEYKAYQEQVLSNSSKFARSLLE----RG-YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE 408 (519)
Q Consensus 336 ~~~iaal~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~----~g-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~ 408 (519)
.....++..+++... ...+++.++.++++++.+.+.|.+ .| +.++.+ ....++|+.+.. + +..++.+.|.
T Consensus 292 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p-~~g~~~~~~~~~-~-~~~~~~~~l~ 368 (422)
T 3d6k_A 292 KLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSP-TGGYFISVDVVP-G-TASRVVELAK 368 (422)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCC-SBSSCEEEEEST-T-CHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCC-CcceEEEEECCC-C-CHHHHHHHHH
Confidence 444444444543210 122455666777788888887765 33 454443 345667777743 2 5677888899
Q ss_pred ccCeEEcccccCCCCC---C-CCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 409 SVHIAANKNTVPGDVS---A-MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 409 ~~gI~v~~~~~p~~~~---~-~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
++||.++.. +... . ...+++||++.. ++ +++++++++.|.+++..
T Consensus 369 ~~gV~v~~~---g~~f~~~~~~~~~~iRis~~~-~~----~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 369 EAGIALTGA---GSSFPLHNDPNNENIRLAPSL-PP----VAELEVAMDGFATCVLM 417 (422)
T ss_dssp HTTEECCCT---TTTSGGGCCTTSCEEEECCSS-SC----HHHHHHHHHHHHHHHHH
T ss_pred HCCeEEEcC---ccccCCCCCCCCCeEEEecCC-CC----HHHHHHHHHHHHHHHHH
Confidence 999999731 2211 1 135789999886 66 79999999999998864
No 141
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.91 E-value=1.2e-23 Score=221.38 Aligned_cols=325 Identities=13% Similarity=0.010 Sum_probs=209.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCC------CcceEEeCCcHHHHHHHHHhhc-------------------CCCCE
Q 010058 114 YGGNEYIDMAESLCQKRALDAFQLDPAK------WGVNVQSLSGSPANFQVYTALL-------------------KPHER 168 (519)
Q Consensus 114 y~~~~~~~~le~~~~~~~~~~~g~~~~~------~~~~V~~~sGs~a~~~~~~all-------------------~pGD~ 168 (519)
|.......++|+.+.+++++++|.+.+. ++..+++++||.+|+.++.+.. .|++.
T Consensus 105 ~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~ 184 (475)
T 3k40_A 105 WIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLV 184 (475)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEE
T ss_pred ccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeE
Confidence 4555778899999999999999997421 0123455555558887766652 24578
Q ss_pred EEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhC-----CcEEEEc-ccc-cccccc
Q 010058 169 IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFR-----PKLIVAG-ASA-YARLYD 241 (519)
Q Consensus 169 Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k-----~klIi~~-~sn-~g~~~d 241 (519)
|++....|.+.... +.+.|..++.++ +| +++ +|+++|++++++.+ |.+|+++ +++ +|...|
T Consensus 185 vi~s~~~H~s~~~~--------~~~~g~~~~~v~--~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~ 252 (475)
T 3k40_A 185 GYCSDQAHSSVERA--------GLLGGVKLRSVQ--SE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY 252 (475)
T ss_dssp EEEETTSCHHHHHH--------HHHHTCEEEEEC--CB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred EEECCCchHHHHHH--------HHHcCCceEEEE--CC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC
Confidence 99998888776542 234455555555 45 457 99999999997631 6666666 444 899999
Q ss_pred HHHHHHHHhhcCCEEEehhhhhhhccccCCCC---CCCCCCeEEEEcCCCcccCCCc-ceEEeeccccccc-cc--Ccch
Q 010058 242 YARIRKVCDKQKAVMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVKEIN-KQ--GQEV 314 (519)
Q Consensus 242 ~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~---~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~-~~--g~~~ 314 (519)
+++|.++|++||+++++|+||..+........ ..++.+|++++++||++.+|.| |++++++...+.. .. ....
T Consensus 253 l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl 332 (475)
T 3k40_A 253 LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYL 332 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC-----------
T ss_pred HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCcccc
Confidence 99999999999999999999877654322111 1223579999999999999987 8888887522111 00 0000
Q ss_pred hhhH-HHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeee
Q 010058 315 MYAY-EDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVN 392 (519)
Q Consensus 315 ~~~~-~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~ 392 (519)
.... ....+.. .....++.. ....++.++++.+...++++..++..++++++.+.|++. |++++.+. ...++.+.
T Consensus 333 ~~~~~~~~~~~~-~~~~~~sr~-~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~-~~~iv~f~ 409 (475)
T 3k40_A 333 KHDMQGSAPDYR-HWQIPLGRR-FRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEI-NMGLVCFR 409 (475)
T ss_dssp -----------------CCCGG-GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCC-BTTEEEEE
T ss_pred CCCcCCCCCCcc-cccccCCCc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEEEEE
Confidence 0000 0000000 001112222 234556667777666788999999999999999999998 99987653 33455555
Q ss_pred ccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCc-cccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 393 LRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPA-LTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 393 ~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~-~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+...+....++.+.|.+.|+..-. |+. ..+...+|+++.. .++ ++|++++++.|+++++..
T Consensus 410 ~~~~~~~~~~l~~~L~~~g~~~~~---~~~--~~g~~~lR~~~~~~~tt----~~di~~~~~~i~~~~~~~ 471 (475)
T 3k40_A 410 LKGSNERNEALLKRINGRGHIHLV---PAK--IKDVYFLRMAICSRFTQ----SEDMEYSWKEVSAAADEM 471 (475)
T ss_dssp ESSCHHHHHHHHHHHHHHTSCBCE---EEE--ETTEEEEEEECCCTTCC----HHHHHHHHHHHHHHHHHH
T ss_pred eCCchHHHHHHHHHHHhCCcEEEE---eeE--ECCEEEEEEEeCCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 433222345677777776654321 111 1234679999654 446 899999999999988643
No 142
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.91 E-value=6.2e-23 Score=213.16 Aligned_cols=351 Identities=13% Similarity=0.024 Sum_probs=219.1
Q ss_pred CHHHHHHHHHHHHhcccCeeecCCCCCC-----cHHHHHHH--hhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 010058 61 DPEIADIIELEKARQWKGLELIPSENFT-----SVSVMQAV--GSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALD 133 (519)
Q Consensus 61 ~~~~~~~~~~e~~~~~~~i~L~a~en~~-----~~~V~ea~--~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~ 133 (519)
.+.+...+.+. ..+...|+|..+.+.. ++.+.+++ .+.+.+ .......|+...+..+++ +.+++
T Consensus 19 ~~~~~~~~~~~-~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~----~~~~~~~Y~~~~g~~~lr----~~ia~ 89 (427)
T 3ppl_A 19 HEDIKRKFDEL-KSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAA----DGTDVRNYGGLDGIVDIR----QIWAD 89 (427)
T ss_dssp HHHHHHHHHHH-HHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCT----TSCBTTSSCCSSCCHHHH----HHHHH
T ss_pred HHHHHHHHHHh-hcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhc----cchhhcCCCCCCCcHHHH----HHHHH
Confidence 33444444432 2334568887776532 12344444 333322 111223355545566666 66777
Q ss_pred HcCCCCCCCcceEEeCCcHH-HH--HHHHHhhcC--C----------CCEEEEecCCCcccccccccccCCceeeeeeee
Q 010058 134 AFQLDPAKWGVNVQSLSGSP-AN--FQVYTALLK--P----------HERIMALDLPHGGHLSHGYQTDTKKISAVSIFF 198 (519)
Q Consensus 134 ~~g~~~~~~~~~V~~~sGs~-a~--~~~~~all~--p----------GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 198 (519)
+++++++ +|++|+|++ ++ ..++.++++ | ||+|++.++.|.++.. .+...|..+
T Consensus 90 ~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~--------~~~~~g~~~ 157 (427)
T 3ppl_A 90 LLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFS--------ITERFGFEM 157 (427)
T ss_dssp HHTSCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------HHHHTTCEE
T ss_pred HhCCCcc----eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHH--------HHHHcCCEE
Confidence 7788874 599999998 66 357888877 7 9999999977766643 223345555
Q ss_pred EEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc--ccc-ccccccHH---HHHHHH-hhcCCEEEehhhhhhhccccCC
Q 010058 199 ETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG--ASA-YARLYDYA---RIRKVC-DKQKAVMLADMAHISGLVAAGV 271 (519)
Q Consensus 199 ~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~--~sn-~g~~~d~~---~i~~ia-~~~~~~livD~ah~~g~~~~~~ 271 (519)
..++ ++++ + +|+++++++++..++++|++. ++| +|...+.+ +|.++| +++|+++|+|++|........-
T Consensus 158 ~~v~--~~~~-g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~ 233 (427)
T 3ppl_A 158 ISVP--MNED-G-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEF 233 (427)
T ss_dssp EEEE--EETT-E-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC
T ss_pred EEeC--CCCC-C-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCC
Confidence 5555 4433 3 999999999964488999876 366 78888766 888888 9999999999997642222111
Q ss_pred -CCCC---------CCCCeEEEEcCCCcc-cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHH
Q 010058 272 -IPSP---------FEYADVVTTTTHKSL-RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTIS 340 (519)
Q Consensus 272 -~~~p---------~~~~di~~~S~~K~l-~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~ia 340 (519)
.+.+ ..+.++++.|+||++ +|+|.||+++++ ++.+.+........ .+++.....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~--------------~l~~~~~~~~~~~~-~~~~~~~q~ 298 (427)
T 3ppl_A 234 PEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA--------------ENRKWYTGHAGIRG-IGPNKVNQL 298 (427)
T ss_dssp CCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH--------------HHHHHHHHHHHHHC-SCCCHHHHH
T ss_pred CCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH--------------HHHHHHHHHhhccc-CCCCHHHHH
Confidence 0000 114678899999974 678889999987 44444433211111 122333333
Q ss_pred HHHHHHHHh--cCHhHHHHHHHHHHHHHHHHHHHHh----c-CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeE
Q 010058 341 GLAVALKQV--KTPEYKAYQEQVLSNSSKFARSLLE----R-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIA 413 (519)
Q Consensus 341 al~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~----~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~ 413 (519)
+++.+++.. ....+++..+.+.++++.+.+.|.+ . ++.+..+ ...+++++.+... +..++.+.|.++||.
T Consensus 299 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p-~~g~~~~~~~~~~--~~~~~~~~l~~~gv~ 375 (427)
T 3ppl_A 299 AHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVP-AGGYFISLDVVPG--TASRVAELAKEAGIA 375 (427)
T ss_dssp HHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCC-SBSSCEEEECSTT--CHHHHHHHHHHTTEE
T ss_pred HHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCC-CccEEEEEECCcc--hHHHHHHHHHHCCCE
Confidence 334444321 1123456667777777777777755 2 4555443 3456677776532 577888889999999
Q ss_pred EcccccCCCCC----CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 414 ANKNTVPGDVS----AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 414 v~~~~~p~~~~----~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
++.. +... ....+++||++... + ++++++.++.|.++++..
T Consensus 376 v~~~---g~~~~~~~~~~~~~~Ris~~~~-~----~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 376 LTGA---GSSYPLRQDPENKNLRLAPSLP-P----VEELEVAMDGVATCVLLA 420 (427)
T ss_dssp CCCT---TTTSGGGCCTTSCEEEECCSSS-C----HHHHHHHHHHHHHHHHHH
T ss_pred EecC---cCcCCCCCCCCCCeEEEECCCC-C----HHHHHHHHHHHHHHHHHH
Confidence 9731 2111 12468999998654 5 799999999999988753
No 143
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.91 E-value=6.5e-23 Score=217.12 Aligned_cols=335 Identities=11% Similarity=0.032 Sum_probs=213.9
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCCcHH-HHHHHHHhhcCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ-LDPAKWGVNVQSLSGSP-ANFQVYTALLKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g-~~~~~~~~~V~~~sGs~-a~~~~~~all~p 165 (519)
.|..+.+++.+.+.... + .+...|+...+...+++.+.+++.+.+| ++.+. .+|++++|++ ++..++.+++++
T Consensus 102 ~P~~~~~~~~~~l~~~~--~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~--~~i~~t~G~~~ai~~~~~~l~~~ 176 (498)
T 3ihj_A 102 FPEDAKKRARRILQACG--G-NSLGSYSASQGVNCIREDVAAYITRRDGGVPADP--DNIYLTTGASDGISTILKILVSG 176 (498)
T ss_dssp SCHHHHHHHHHHHHHC-------------CCSCHHHHHHHHHHHHHHTTTCCCCG--GGEEEESSHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHHHHHHhcc--C-CCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCc--ccEEEcCCHHHHHHHHHHHHcCC
Confidence 45666677777776521 1 0112244456667788888888888885 53221 4699999998 888888999999
Q ss_pred CC----EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhh----CCcEEEEc-ccc
Q 010058 166 HE----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALF----RPKLIVAG-ASA 235 (519)
Q Consensus 166 GD----~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~----k~klIi~~-~sn 235 (519)
|| +|+++++.|..+.. .+...|..+..++ .+++ +|.+|+++|++++++. ++++|+++ ++|
T Consensus 177 gd~~~d~Vlv~~p~y~~~~~--------~~~~~g~~~v~~~--~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~N 246 (498)
T 3ihj_A 177 GGKSRTGVMIPIPQYPLYSA--------VISELDAIQVNYY--LDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGN 246 (498)
T ss_dssp CGGGSEEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCT
T ss_pred CCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEee--ccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCC
Confidence 86 99999988776543 2333454444444 4433 5789999999999874 58888887 666
Q ss_pred -cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC------------CC-eEEEEcCCCcc---cCCCc
Q 010058 236 -YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE------------YA-DVVTTTTHKSL---RGPRG 295 (519)
Q Consensus 236 -~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~------------~~-di~~~S~~K~l---~Gprg 295 (519)
+|...+ +++|.++|+++|++||+|++|.......+....++. .. .+++.|+||++ +|.|+
T Consensus 247 PTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~ 326 (498)
T 3ihj_A 247 PTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRG 326 (498)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCC
T ss_pred CCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccce
Confidence 787755 667889999999999999997654332221111111 11 26778999998 58899
Q ss_pred ceEEe---ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh---------cCHhHHHHHHHHHH
Q 010058 296 AMIFF---RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV---------KTPEYKAYQEQVLS 363 (519)
Q Consensus 296 G~i~~---~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~---------~~~~~~~~~~~~~~ 363 (519)
||+++ ++ ++.+.+...... ..+++.....+++.++... .....+...+++.+
T Consensus 327 G~~~~~~~~~--------------~l~~~l~~~~~~--~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~ 390 (498)
T 3ihj_A 327 GYMEVINLHP--------------EIKGQLVKLLSV--RLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAK 390 (498)
T ss_dssp EEEEEESCCH--------------HHHHHHHHHHHH--SCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCH--------------HHHHHHHHHHhc--cCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHH
Confidence 99984 44 444444332111 1234445555555444210 00123456678899
Q ss_pred HHHHHHHHHHhc-CCEEecCCCCcceeeeeccC----------CCCcHHH--HHHhhcccCeEEcccccCCCCCCCCCCe
Q 010058 364 NSSKFARSLLER-GYDLVSGGTENHLVLVNLRN----------KGIDGSR--VEKVLESVHIAANKNTVPGDVSAMVPGG 430 (519)
Q Consensus 364 ~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~----------~~~~~~~--~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 430 (519)
+++.+.+.|.+. |+.+..+ ..+.+.|+.+.. .+++.++ +.++|++.||.+.....++. +..+++
T Consensus 391 ~~~~l~~~L~~~~g~~~~~p-~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~--~~~~~~ 467 (498)
T 3ihj_A 391 KAKLTEDLFNQVPGIHCNPL-QGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ--REGTYH 467 (498)
T ss_dssp HHHHHHHHHHTSTTEECCCC-CBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCC--CTTCCB
T ss_pred HHHHHHHHHhcCCCcEecCC-CeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--CCCCCE
Confidence 999999999998 8877654 234455554431 1444455 46778889999973322221 134578
Q ss_pred EEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 431 iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+|+++. .+ +++++++++.|.+++...
T Consensus 468 ~Ris~~--~~----~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 468 FRMTIL--PP----VEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp EEEECC--SC----HHHHHHHHHHHHHHHHHH
T ss_pred EEEEeC--CC----HHHHHHHHHHHHHHHHHH
Confidence 999984 45 799999999999888643
No 144
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.91 E-value=2.4e-23 Score=217.16 Aligned_cols=305 Identities=15% Similarity=0.096 Sum_probs=201.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh-cCCCCEEEEecCCCcccccccccccCCceeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-LKPHERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
++..++...+++++++++|+++ .++.+++|++ ++.+++.++ +++||+|++++..|+++....... ....|
T Consensus 104 ~g~~~~~~~~~~~la~~~g~~~----~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~----a~~~G 175 (438)
T 1wyu_A 104 QGVLQATFEYQTMIAELAGLEI----ANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAY----LEAVG 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSE----ECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHH----HHHTT
T ss_pred hhHHHHHHHHHHHHHHHhCCCc----cceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHH----HHHCC
Confidence 5566677788899999999986 3578888887 545555554 689999999998887765433210 01235
Q ss_pred eeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhh-hhhhccccCCCC
Q 010058 196 IFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMA-HISGLVAAGVIP 273 (519)
Q Consensus 196 ~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~a-h~~g~~~~~~~~ 273 (519)
..++.++. +++.+|+++ +++ +|++|+++.+| +|...|+++|.++|+++|+++++|.. ++.|..... ..
T Consensus 176 ~~v~~v~~----~~~~~d~~~----i~~-~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~~ 245 (438)
T 1wyu_A 176 AKLLTLPL----EGGRTPLPE----VGE-EVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GA 245 (438)
T ss_dssp CEEEEECC----BTTBCCCCC----CCT-TEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HH
T ss_pred CEEEEEcC----cCCccCHHH----hCC-CeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-cc
Confidence 44555543 246778776 555 89999988336 89999999999999999999997644 444443211 00
Q ss_pred CCCCCCeEEEEcCCC-----cccCCCcceEEeecccc-ccc--ccCcchh------hhH-----HHHhhhcccCCCCCCc
Q 010058 274 SPFEYADVVTTTTHK-----SLRGPRGAMIFFRKGVK-EIN--KQGQEVM------YAY-----EDKINQAVFPGLQGGP 334 (519)
Q Consensus 274 ~p~~~~di~~~S~~K-----~l~GprgG~i~~~~~~~-~~~--~~g~~~~------~~~-----~~~i~~~~~~~~~g~~ 334 (519)
. ++|++++|+|| +++||++|+++++++.. ..+ ..|.... +.+ ...+... .+++
T Consensus 246 ~---g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~-----~~t~ 317 (438)
T 1wyu_A 246 Y---GADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRA-----KAKS 317 (438)
T ss_dssp H---TCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGG-----GSSC
T ss_pred C---CCCEEEECCcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchh-----cccC
Confidence 1 58999999777 78899779999988642 112 1121100 000 0000000 1233
Q ss_pred cH---HHHHHHHHH--HHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhhc
Q 010058 335 HN---HTISGLAVA--LKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE 408 (519)
Q Consensus 335 ~~---~~iaal~~a--l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~ 408 (519)
+. ..++++.++ +..+...++++..+++.++++++.+.|+++ |++++.+. ..+.++.+.. +.+..++.+.|.
T Consensus 318 ~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~~~~~~~~~~-~~~~~~~~~~L~ 394 (438)
T 1wyu_A 318 NITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK--PFFNEFALAL-PKDPEAVRRALA 394 (438)
T ss_dssp CCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS--SBCSEEEEEC-SSCHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC--CeEEEEEEeC-CCCHHHHHHHHH
Confidence 22 344444444 555555568889999999999999999998 99887642 2233333322 246778888888
Q ss_pred ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 409 SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 409 ~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+.||.++. .++... .++.+|+++...++ ++|++++++.|++++
T Consensus 395 ~~gi~v~~--~~~~~~--~~~~lRis~~~~~t----~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 395 ERGFHGAT--PVPREY--GENLALFAATELHE----EEDLLALREALKEVL 437 (438)
T ss_dssp HTTCCCCE--ECCTTS--CSSEEEEECCTTCC----HHHHHHHHHHHHHHC
T ss_pred HCCceecc--cccccc--CCCeEEEEecccCC----HHHHHHHHHHHHHHh
Confidence 88998821 022211 15789999998888 899999999998764
No 145
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.91 E-value=5.4e-24 Score=215.59 Aligned_cols=331 Identities=11% Similarity=0.044 Sum_probs=206.0
Q ss_pred hcccCeeecCCCCCC--cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 74 RQWKGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 74 ~~~~~i~L~a~en~~--~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
++...+.+..++|+. +|.|++++.+.+.. ..|+......+++ +++++++|.+. .+++++|
T Consensus 11 ~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~---------~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~g 72 (359)
T 3pj0_A 11 QKTPYKLGGNGPRNVGVLTEALQNIDDNLES---------DIYGNGAVIEDFE----TKIAKILGKQS-----AVFFPSG 72 (359)
T ss_dssp HTCSEESSSSSCCBHHHHHHHTTTSCTTCBC---------CBTTBSHHHHHHH----HHHHHHHTCSE-----EEEESCH
T ss_pred HhcchhhcCCCccccCCCHHHHHHHHhhccc---------CcccCCHHHHHHH----HHHHHHhCCCc-----EEEeCCH
Confidence 445667888899987 78898888774332 1233345555665 88889999875 3777888
Q ss_pred HHHHHHHHHhhcCCCCE--EEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEE
Q 010058 152 SPANFQVYTALLKPHER--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLI 229 (519)
Q Consensus 152 s~a~~~~~~all~pGD~--Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klI 229 (519)
+.|+..++.+++.+||+ |++....|........ .....|..+..++ . +++.+|+++++++ .+ ++++|
T Consensus 73 ~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~-----~~~~~g~~~~~v~--~--~~~~~d~~~l~~~-~~-~~~~v 141 (359)
T 3pj0_A 73 TMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDG-----LKELQQITPLLLG--T--ANQLLTIDDIKSL-RE-PVSSV 141 (359)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTH-----HHHHHCCEEEECS--C--TTSCCCHHHHHTC-SS-CCSEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEeccceeeehhcch-----HHHhcCceEEecC--C--cCCCcCHHHHHhc-cC-CceEE
Confidence 88988899999999997 4444333322211110 0012344444333 3 4578999999987 44 89999
Q ss_pred EEc-ccc-c-cccccHHHH---HHHHhhcCCEEEehhhhhhhccc-cCCCCCCC-CCCeEEEEcCCCcccCCCcceEEee
Q 010058 230 VAG-ASA-Y-ARLYDYARI---RKVCDKQKAVMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFR 301 (519)
Q Consensus 230 i~~-~sn-~-g~~~d~~~i---~~ia~~~~~~livD~ah~~g~~~-~~~~~~p~-~~~di~~~S~~K~l~GprgG~i~~~ 301 (519)
+++ ++| + |...+.+++ .++|++||++||+|++|..+... .+....++ .++|+++.|+||++.+|.||+++.+
T Consensus 142 ~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~ 221 (359)
T 3pj0_A 142 LIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGN 221 (359)
T ss_dssp EEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEEC
T ss_pred EEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEECC
Confidence 998 545 4 677775555 99999999999999987654321 11111011 2579999999999998877788877
Q ss_pred cccccccccCcchhhhHHHHhhhc--ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCE
Q 010058 302 KGVKEINKQGQEVMYAYEDKINQA--VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYD 378 (519)
Q Consensus 302 ~~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 378 (519)
+ ++.+.+... .+.+.....+....+++ .+++.. .+..+++.++++++.+.|+++ |+.
T Consensus 222 ~--------------~l~~~~~~~~~~~~~~~~~~~~~~~a~~-~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~ 281 (359)
T 3pj0_A 222 D--------------DFVQEAKIWKRRYGGDLISLYPYILSAD-YYFEKR-----IGKMAEYFEAAKGLAERFNSCSGVK 281 (359)
T ss_dssp H--------------HHHHHHHHHHHHTTCCCSCCHHHHHHHH-HHHHHH-----GGGHHHHHHHHHHHHHHHHTSTTEE
T ss_pred H--------------HHHHHHHHHHHHhCCCcchhHHHHHHHH-HHHHHH-----HHHhHHHHHHHHHHHHHHhhCCCce
Confidence 7 555544331 11111112222222222 344332 133456788899999999998 888
Q ss_pred EecCCCCcceeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 379 LVSGGTENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 379 ~~~~~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
+...++..+++++.+... +.+..++.+.|.++||.++ |+.. .....+.+|+++..... ....+++++.++.|.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~----~g~~~~~~~~~~~r~~i~~~~~-~~~~e~l~~~l~~l~ 356 (359)
T 3pj0_A 282 TVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGIS----GYLQEKSADVCAFEVSVGDAFA-EIPAKNLELVFRCLE 356 (359)
T ss_dssp EESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECC----SCCEEEETTEEEEEEECCTTGG-GSCHHHHHHHHHHHH
T ss_pred eeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEec----CCccccCCCceEEEEEecCccc-cCCHHHHHHHHHHHH
Confidence 753333456667766432 1235678888999999997 4432 11234578986643211 112677777776665
Q ss_pred HH
Q 010058 457 AA 458 (519)
Q Consensus 457 ~~ 458 (519)
++
T Consensus 357 ~~ 358 (359)
T 3pj0_A 357 KE 358 (359)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 146
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.91 E-value=4.5e-23 Score=212.20 Aligned_cols=339 Identities=10% Similarity=0.024 Sum_probs=216.8
Q ss_pred ccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCcHH-
Q 010058 76 WKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS-LSGSP- 153 (519)
Q Consensus 76 ~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~-~sGs~- 153 (519)
...+++.+++..+|+.|++++.+.... . .++ .++| ....++.+.+++++++++|++.. .+|.+ ++|++
T Consensus 39 ~~~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~--~~~~---~~~~~~~~~~~~~la~~~g~~~~---~~i~~~t~g~t~ 108 (398)
T 2fyf_A 39 PRDGRFGSGPSKVRLEQLQTLTTTAAA-L-FGT--SHRQ---APVKNLVGRVRSGLAELFSLPDG---YEVILGNGGATA 108 (398)
T ss_dssp CSSCBCCSSSCCCCHHHHHGGGTTTTT-T-TTS--CTTS---HHHHHHHHHHHHHHHHHTTCCTT---CEEEEEETCHHH
T ss_pred cCCccccCCCCCCCHHHHHHHhhcCCC-c-cCc--CcCC---HHHHHHHHHHHHHHHHHhCCCCC---ceEEEeCCchhH
Confidence 356788888888999999998763111 0 010 0111 22234556677999999999742 25777 88777
Q ss_pred HHHHHHHhhcCCC-CEEEEecCCCcccccccccccCCceeee--eeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 154 ANFQVYTALLKPH-ERIMALDLPHGGHLSHGYQTDTKKISAV--SIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 154 a~~~~~~all~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~--g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
++..++.++++|| |.| ....|+...... .... |..+..++. + ++...+. .+++ +|++|+
T Consensus 109 al~~~~~~l~~~gv~~v--~~~~~~~~~~~~-------~~~~~~g~~~~~v~~--~-~g~~~~~-----~i~~-~~~~v~ 170 (398)
T 2fyf_A 109 FWDAAAFGLIDKRSLHL--TYGEFSAKFASA-------VSKNPFVGEPIIITS--D-PGSAPEP-----QTDP-SVDVIA 170 (398)
T ss_dssp HHHHHHHHTCSSCEEEE--ECSHHHHHHHHH-------HHHCTTSCCCEEEEC--C-TTCCCCC-----CCCT-TCSEEE
T ss_pred HHHHHHHHhcCCCeEEE--eCCHHHHHHHHH-------HHHhCCCCceEEEec--C-CCCCCCc-----cccC-CCCEEE
Confidence 8888999999998 444 222221100000 0111 334444543 3 2233332 1444 899998
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCCc-ceEEeecccc--
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRG-AMIFFRKGVK-- 305 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~~~-- 305 (519)
++ ++| +|...|+++|.++ +|+++++|++|..|....++ ..+|++++|+||+++++.| |+++++++..
T Consensus 171 ~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~-----~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~ 242 (398)
T 2fyf_A 171 WAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDI-----AETDAYYFAPQKNFASDGGLWLAIMSPAALSR 242 (398)
T ss_dssp EESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCG-----GGCSEEEECTTSTTCSCSSEEEEEECHHHHHH
T ss_pred EeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCc-----ccCcEEEEecCcccCCCCceEEEEECHHHHHH
Confidence 88 666 8999999888876 89999999999876543322 2479999999999876633 8888887421
Q ss_pred cccc--cCcc--hhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHh-HHHHHHHHHHHHHHHHHHHHhc-CCEE
Q 010058 306 EINK--QGQE--VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPE-YKAYQEQVLSNSSKFARSLLER-GYDL 379 (519)
Q Consensus 306 ~~~~--~g~~--~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~ 379 (519)
+... .|.. .........+........++++...++++.++++.+...+ +++..+++.++++++.+.|++. |+++
T Consensus 243 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 322 (398)
T 2fyf_A 243 IEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTP 322 (398)
T ss_dssp HHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred hhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCcee
Confidence 1000 0000 0000000000000012336788888888888888765554 7889999999999999999998 8887
Q ss_pred ec--C-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHH
Q 010058 380 VS--G-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFD 456 (519)
Q Consensus 380 ~~--~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~ 456 (519)
+. + ...++++++.+. .+++..++.+.|.+.||.++ ++.. ....+.|||+++..++ ++|++++++.|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~----~g~~-~~~~~~iRis~~~~~t----~e~i~~~~~~l~ 392 (398)
T 2fyf_A 323 FVTDPGLRSQVVGTIDFV-DDVDAGTVAKILRANGIVDT----EPYR-KLGRNQLRVAMFPAVE----PDDVSALTECVD 392 (398)
T ss_dssp SCCSGGGBCSSEEEEEEC-TTSCHHHHHHHHHHTTCBCC----SCCT-TTCSSEEEEECCTTSC----HHHHHHHHHHHH
T ss_pred ccCChhhcCCcEEEEECC-CCCCHHHHHHHHHHCCcEEe----cCcc-cCCCCEEEEEecCCCC----HHHHHHHHHHHH
Confidence 64 2 112335566653 35678888888888899986 3321 1235789999998778 899999999999
Q ss_pred HHHH
Q 010058 457 AAVK 460 (519)
Q Consensus 457 ~~l~ 460 (519)
++++
T Consensus 393 ~~l~ 396 (398)
T 2fyf_A 393 WVVE 396 (398)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 147
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.91 E-value=5.5e-24 Score=222.28 Aligned_cols=285 Identities=14% Similarity=0.142 Sum_probs=194.0
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeee
Q 010058 126 LCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYR 204 (519)
Q Consensus 126 ~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~ 204 (519)
.+++++++ +|++. ++.+++|++ ++.+++.++++|||+|++.+..|.++... +...|..+..++..
T Consensus 61 ~~~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~--------~~~~G~~~~~v~~~ 126 (446)
T 2x3l_A 61 KSMKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHA--------LDISQQEGHFIETH 126 (446)
T ss_dssp HHHHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHH--------HHHHTCCEEECEEE
T ss_pred HHHHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHH--------HHHcCCeEEEEeCe
Confidence 34488899 99872 589999987 99999999999999999999888776542 22345555555543
Q ss_pred eCCCC---CCCCHHHHHHHhhhhCCcEEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CC
Q 010058 205 LDEST---GYIDYEQLEKSAALFRPKLIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YA 279 (519)
Q Consensus 205 ~d~~~---~~iD~d~l~~~i~~~k~klIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~ 279 (519)
.+++. +.+|++++ +.+ ++++|+++++| +|...|+++|.++|+++|+++++|++|...+...+...+... ++
T Consensus 127 ~~~~~~~~~~~d~~~l---~~~-~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~ 202 (446)
T 2x3l_A 127 QSPLTNHYNKVNLSRL---NND-GHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQA 202 (446)
T ss_dssp ECTTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTC
T ss_pred eccccCcCCCCCHHHH---cCC-CceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCC
Confidence 34321 46788877 344 78999988555 899999999999999999999999998762212121111111 57
Q ss_pred eEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHH
Q 010058 280 DVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQ 358 (519)
Q Consensus 280 di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~ 358 (519)
|++++|+||++.|+.+ |+++++++.. + ...+.........++++...++++.++++.+...+.+++.
T Consensus 203 Di~~~S~~K~l~~~~g~g~l~~~~~~i-----------~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~ 270 (446)
T 2x3l_A 203 DYVVQSFHKTLPALTMGSVLYIHKNAP-----------Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFF 270 (446)
T ss_dssp SEEEECHHHHSSSCTTCEEEEEETTCT-----------T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred CEEEECCccccccccccEEEEEcCCcC-----------C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHH
Confidence 9999999999887755 9999987521 1 1122211111123677888888888777766433334456
Q ss_pred HHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcc
Q 010058 359 EQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPAL 438 (519)
Q Consensus 359 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ 438 (519)
++..++++++.+. |+.++.+. +...+++.+. +.++.++.+.|.+.||.++. ++ .+.+|++++..
T Consensus 271 ~~~~~l~~~l~~~----g~~~~~~~-~~~~l~i~~~--~~~~~~l~~~L~~~GI~v~~---~g------~~~iRi~~~~~ 334 (446)
T 2x3l_A 271 AKRAQLIECLENK----GFEMLQVD-DPLKLLIKYE--GFTGHDIQNWFMNAHIYLEL---AD------DYQALAILPLW 334 (446)
T ss_dssp HHHHHHHHHHHHH----TCEEEECS-STTEEEEECT--TSCHHHHHHHHHHTTEEESE---EC------SSCEEEECCCC
T ss_pred HHHHHHHHHHHHc----CCEECcCC-CCeEEEEEeC--CcCHHHHHHHHHHCCCEEEe---cC------CCEEEEEeecC
Confidence 6666666666655 88887643 2334556554 66788899999888999962 22 25799999877
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHH
Q 010058 439 TSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 439 ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
++ ++|+ ++++.|.++++.
T Consensus 335 ~t----~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 335 HH----DDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp CT----TCCC-CHHHHHHHHHTC
T ss_pred CC----HHHH-HHHHHHHHHHHh
Confidence 77 7899 999999988753
No 148
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.91 E-value=4.5e-23 Score=214.93 Aligned_cols=335 Identities=16% Similarity=0.197 Sum_probs=213.4
Q ss_pred CCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh-
Q 010058 84 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL- 162 (519)
Q Consensus 84 ~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al- 162 (519)
+.+.+++.+.+++.+.+.+. .||.+ ....+++ +.+++++|.+. .|.+++|+.|+..++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~--------~~~~~-~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDG--------WLTTG-RFNDAFE----KKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHC--------CCBSC-HHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcC--------CcCCC-hHHHHHH----HHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 55667889999999888652 12332 4455555 88888999873 488888888888888888
Q ss_pred --------cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEccc
Q 010058 163 --------LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGAS 234 (519)
Q Consensus 163 --------l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~s 234 (519)
++|||+|++++++|.++..... ..|..+..+ +++++++.+|++++++++++ ++++|+++.
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~--------~~g~~~~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~- 166 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVNPTI--------QNGLIPVFV--DVDIPTYNVNASLIEAAVSD-KTKAIMIAH- 166 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHHHHH--------HTTCEEEEC--CEETTTTEECGGGHHHHCCT-TEEEEEEEC-
T ss_pred hcccccccCCCcCEEEECCCCcHHHHHHHH--------HcCCEEEEE--eccCccCCcCHHHHHHhcCC-CCeEEEEeC-
Confidence 8999999999988877765332 234444444 45544688999999999986 899998863
Q ss_pred cccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcC--CCcccCCCcceEEeeccc-c-ccc--
Q 010058 235 AYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTT--HKSLRGPRGAMIFFRKGV-K-EIN-- 308 (519)
Q Consensus 235 n~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~--~K~l~GprgG~i~~~~~~-~-~~~-- 308 (519)
++|...|+++|.++|+++|+++|+|++|+.|.... ..... ...|++++|+ .|.++|++||+++++++. . ...
T Consensus 167 ~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~-~~~~~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~ 244 (437)
T 3bb8_A 167 TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYD-GKMAG-TFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESF 244 (437)
T ss_dssp GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEET-TEETT-SSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHH
T ss_pred CCCChhcHHHHHHHHHHcCCEEEEECccccCceEC-Ceecc-cccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHH
Confidence 35666899999999999999999999998887652 21110 1367766653 556788899999998642 1 000
Q ss_pred -ccCcc------hhhhHHHHhh-----------hccc---CCC-CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 010058 309 -KQGQE------VMYAYEDKIN-----------QAVF---PGL-QGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSS 366 (519)
Q Consensus 309 -~~g~~------~~~~~~~~i~-----------~~~~---~~~-~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~ 366 (519)
..|.. ......+... .... .+. .+.......++++ +++ .+++..++.+++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~-~l~-----~~~~~~~~~~~~~~ 318 (437)
T 3bb8_A 245 RDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLA-QLE-----RIEEFVEKRKANFK 318 (437)
T ss_dssp HBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHH-HHH-----HHHHHHHHHHHHHH
T ss_pred HHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHH-HHH-----HHHHHHHHHHHHHH
Confidence 00100 0000000000 0000 000 0112222222322 232 23566677788999
Q ss_pred HHHHHHHhc-CCEEecCCC----Cc-ceeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCC-CCCC------------
Q 010058 367 KFARSLLER-GYDLVSGGT----EN-HLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGD-VSAM------------ 426 (519)
Q Consensus 367 ~l~~~L~~~-g~~~~~~~~----~~-~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~-~~~~------------ 426 (519)
++.+.|+++ |+.++.... .+ +.+.+.+... +.+..++.+.|.+.||.++..+-|.- ..+.
T Consensus 319 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~ 398 (437)
T 3bb8_A 319 YLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGEL 398 (437)
T ss_dssp HHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCC
T ss_pred HHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCC
Confidence 999999988 776553211 11 1223333322 45788899999999999985432210 0010
Q ss_pred ------CCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 427 ------VPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 427 ------~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..+.|||+++..+| ++|++++++.|++++.
T Consensus 399 ~~~~~~~~~~lrl~~~~~~t----~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 399 TNTDRIMNQTFWIGIYPGLT----HDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHHHHHHEEEECCSTTCC----HHHHHHHHHHHHHHTT
T ss_pred cHHHHHhcCEEEecCCCCCC----HHHHHHHHHHHHHHHc
Confidence 01249999988888 9999999999988764
No 149
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.84 E-value=6.3e-26 Score=233.00 Aligned_cols=338 Identities=13% Similarity=0.102 Sum_probs=222.5
Q ss_pred cCeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCCcH
Q 010058 77 KGLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLSGS 152 (519)
Q Consensus 77 ~~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~sGs 152 (519)
+.|+|..+++ .+++.+.+++.+.+.+.. .+| +.. ..++++.+.+++.+.+|. +++ +|++++|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y------~~~--~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~ 98 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLV-YGY------TYA--SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGV 98 (392)
Confidence 4567766655 357889999988775421 122 221 456777777888878884 443 58899988
Q ss_pred H-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEE
Q 010058 153 P-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVA 231 (519)
Q Consensus 153 ~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~ 231 (519)
+ ++..++.++++|||+|++.++.|.++.. .+...|..+..+++..+..++.+|++++++.+++.++++|++
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (392)
T 3b1d_A 99 VPAISIAIQAFTKEGEAVLINSPVYPPFAR--------SVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLL 170 (392)
Confidence 7 8888999999999999999877766543 233345544444432111135689999999987447898888
Q ss_pred c-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CC----CCCeEEEEcCCCcc--cCCCcceE
Q 010058 232 G-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PF----EYADVVTTTTHKSL--RGPRGAMI 298 (519)
Q Consensus 232 ~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~----~~~di~~~S~~K~l--~GprgG~i 298 (519)
+ ++| +|...+ +++|+++|+++|+++|+|++|............ .+ ...++++.|++|++ +|+|.|++
T Consensus 171 ~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (392)
T 3b1d_A 171 CNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYA 250 (392)
Confidence 7 555 676654 889999999999999999998653321111000 00 13458889999987 67788999
Q ss_pred EeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHh-c-C
Q 010058 299 FFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLE-R-G 376 (519)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g 376 (519)
+++++ ++.+.+.....+...++++....++..++++.. ...+++.++++.++++.+.+.|++ . |
T Consensus 251 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 316 (392)
T 3b1d_A 251 IIENP-------------TLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPR 316 (392)
Confidence 98753 344444333222212344444455555555532 234577888899999999999988 4 7
Q ss_pred CEEecCCCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHH
Q 010058 377 YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEF 454 (519)
Q Consensus 377 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~ 454 (519)
+.++.+ ..+.+.|+++...+.+..++.+.|. ++||.+. |+.. ++..++++||++.. + ++++++.++.
T Consensus 317 ~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~----~g~~f~~~~~~~iRi~~~~--~----~e~i~~~l~~ 385 (392)
T 3b1d_A 317 LKVMKP-QGTYLIWLDFSDYGLTDDALFTLLHDQAKVILN----RGSDYGSEGELHARLNIAA--P----KSLVEEICKR 385 (392)
Confidence 766543 2344455666433345667777774 7899997 4443 22345789999653 3 6889999888
Q ss_pred HHHHHH
Q 010058 455 FDAAVK 460 (519)
Q Consensus 455 l~~~l~ 460 (519)
|.++++
T Consensus 386 l~~~l~ 391 (392)
T 3b1d_A 386 IVCCLP 391 (392)
Confidence 887764
No 150
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.90 E-value=1.8e-22 Score=203.79 Aligned_cols=312 Identities=12% Similarity=0.111 Sum_probs=212.0
Q ss_pred ccCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH
Q 010058 76 WKGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP 153 (519)
Q Consensus 76 ~~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~ 153 (519)
++.|+|..++|+ +++.|++++.+.+.... +||.. .+ .+++ +++++++|++++ +|++++|++
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~--~y~~~------~~-~~lr----~~la~~~~~~~~----~i~~t~g~~ 77 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNCIR--HYPEP------DA-GTLR----QMLAKRNSVDNN----AILVTNGPT 77 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGGGG--SCCCT------TC-HHHH----HHHHHHTTCCGG----GEEEESHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhHHh--cCCCC------cH-HHHH----HHHHHHhCcCHH----HEEEcCCHH
Confidence 467899888775 47899999998874322 44433 22 3444 888899998774 599999988
Q ss_pred -HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc
Q 010058 154 -ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG 232 (519)
Q Consensus 154 -a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~ 232 (519)
++..++.++. ||+|++.++.|.++.. .+...|..+..++.. ++ ...+++ + ++++|+++
T Consensus 78 ~al~~~~~~l~--gd~Vi~~~p~~~~~~~--------~~~~~g~~~~~v~~~-~~-~~~~~~--------~-~~~~v~i~ 136 (350)
T 3fkd_A 78 AAFYQIAQAFR--GSRSLIAIPSFAEYED--------ACRMYEHEVCFYPSN-ED-IGEADF--------S-NMDFCWLC 136 (350)
T ss_dssp HHHHHHHHHTT--TCEEEEEESCCHHHHH--------HHHHTTCEEEEEETT-SC-GGGSCC--------T-TCSEEEEE
T ss_pred HHHHHHHHHHC--CCEEEEeCCCcHHHHH--------HHHHcCCeEEEEecC-Cc-cccCcc--------C-CCCEEEEe
Confidence 8887888877 9999999977766543 222335545455430 32 233443 3 79988887
Q ss_pred -ccc-ccccccHHHHHHHHhhcC-CEEEehhhhhhhccccCCCC-CCC--CCCeEEEEcCCCcc--cCCCcceEEeeccc
Q 010058 233 -ASA-YARLYDYARIRKVCDKQK-AVMLADMAHISGLVAAGVIP-SPF--EYADVVTTTTHKSL--RGPRGAMIFFRKGV 304 (519)
Q Consensus 233 -~sn-~g~~~d~~~i~~ia~~~~-~~livD~ah~~g~~~~~~~~-~p~--~~~di~~~S~~K~l--~GprgG~i~~~~~~ 304 (519)
++| +|...+.+++.++++.++ .++|+|++|... ...+... ..+ ...++++.|++|++ +|.|.|++++++
T Consensus 137 ~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~-- 213 (350)
T 3fkd_A 137 NPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSF-TTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK-- 213 (350)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTS-CSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--
T ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhh-ccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH--
Confidence 666 899999999999998876 799999998532 2211110 101 14568899999976 577889999976
Q ss_pred ccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCC
Q 010058 305 KEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGG 383 (519)
Q Consensus 305 ~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 383 (519)
++.+.+.....+ .+++....+++..+++... .+.+..++..++++.+.+.|++. |+.+..+
T Consensus 214 ------------~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~- 275 (350)
T 3fkd_A 214 ------------DFMKRVAAFSTP---WAVNALAIEAAKFILIHPA--QFTLPIRKWQRNTVDFITALNRLDGVEVHPS- 275 (350)
T ss_dssp ------------HHHHHHHTTCCT---TCSCHHHHHHHHHHHHCTT--TTCCCHHHHHHHHHHHHHHHHHSTTEEECCC-
T ss_pred ------------HHHHHHHHhCCC---CCCCHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHHhcCCCcEECCC-
Confidence 566655543322 3556666666666666432 13222334448899999999998 8887543
Q ss_pred CCcceeeeeccCCCCcHHHHHHhhcc-cCeEEcccccCCCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 384 TENHLVLVNLRNKGIDGSRVEKVLES-VHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 384 ~~~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
...++++.+.. + +..++.+.|.+ .||.++ ||.. +....+++||++. + ++|++++.++|++++.
T Consensus 276 -~~~~~~~~~~~-~-~~~~l~~~L~~~~gi~v~----~g~~f~~~~~~~iRis~~---~----~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 276 -GTTFFLLRLKK-G-TAAELKKYMLEEYNMLIR----DASNFRGLDESYVRITTQ---R----PAQNQLFIKALETFLE 340 (350)
T ss_dssp -SSSEEEEEESS-S-CHHHHHHHHHHTTCEECE----ECTTSTTCCTTEEEEECC---C----HHHHHHHHHHHHHHHT
T ss_pred -CCcEEEEECCC-C-CHHHHHHHHHHHCCEEEE----eCccCCCCCCCEEEEEcC---C----HHHHHHHHHHHHHHHH
Confidence 34455566543 2 67788888877 999997 4543 3344689999965 4 7899999999998875
No 151
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.90 E-value=2.7e-23 Score=214.52 Aligned_cols=280 Identities=16% Similarity=0.165 Sum_probs=190.3
Q ss_pred CHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhh--hcc--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC
Q 010058 61 DPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMT--NKY--SEGYPGARYYGGNEYIDMAESLCQKRALDAFQ 136 (519)
Q Consensus 61 ~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~--~~~--~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g 136 (519)
..++++.++++..++...++.++++|. +.|++|+.+... ..+ ++||. |+ ....+.+| +.+++++|
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~~~gy~----y~-~~~~~~Le----~~lA~l~g 87 (427)
T 3i16_A 19 VLKLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHFTNSSGYG----YG-DIGRDSLD----AVYARVFN 87 (427)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTC----TT-CHHHHHHH----HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhcCCCCCCC----CC-HHHHHHHH----HHHHHHhC
Confidence 456777778888888888999988885 779999876532 111 11221 22 23455666 88999999
Q ss_pred CCCCCCcceEE---eCCcHHHHHHHHHhhcCCCCEEEEec-CCCccccccc-cccc--CCceeeeeeeeEEEeeeeCCCC
Q 010058 137 LDPAKWGVNVQ---SLSGSPANFQVYTALLKPHERIMALD-LPHGGHLSHG-YQTD--TKKISAVSIFFETMPYRLDEST 209 (519)
Q Consensus 137 ~~~~~~~~~V~---~~sGs~a~~~~~~all~pGD~Vl~~~-~~~~~~~~~~-~~~~--~~~v~~~g~~~~~v~~~~d~~~ 209 (519)
++. + +. ++||+.|+..++.++++|||+|++.+ ..|+++.... .... .......|..+..++ .+ ++
T Consensus 88 ~e~----a-lv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~--~~-~~ 159 (427)
T 3i16_A 88 TES----A-LVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVD--LK-ED 159 (427)
T ss_dssp CSE----E-EEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECC--CC-TT
T ss_pred Ccc----e-EEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEec--Cc-cC
Confidence 986 3 55 78888899999999999999999998 7776654211 0000 001112244444443 44 35
Q ss_pred CCCCHHHHHHHhhh-hCCcEEEEcc----cc--ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCCCC-CC
Q 010058 210 GYIDYEQLEKSAAL-FRPKLIVAGA----SA--YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSPFE-YA 279 (519)
Q Consensus 210 ~~iD~d~l~~~i~~-~k~klIi~~~----sn--~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p~~-~~ 279 (519)
+.+|++++++++++ .+||+|+++. ++ +|...|+++|+++|++ +|+++++|++|..+.... .|+. ++
T Consensus 160 g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~----~p~~~ga 235 (427)
T 3i16_A 160 GKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTK----EPTDVGA 235 (427)
T ss_dssp SSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSS----CGGGGTC
T ss_pred CCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccC----CccccCC
Confidence 78999999999983 3899999875 33 5688999999999999 999999999987665221 2222 68
Q ss_pred eEEEEcCCCcccC---CCcceEEeecccccccccCcchhhhHHHHhhhcc-cCCCC--CCccHHHHHHHHHHHHHhcCHh
Q 010058 280 DVVTTTTHKSLRG---PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAV-FPGLQ--GGPHNHTISGLAVALKQVKTPE 353 (519)
Q Consensus 280 di~~~S~~K~l~G---prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-~~~~~--g~~~~~~iaal~~al~~~~~~~ 353 (519)
|++++|+||+++| ++||++++++ ++.+++.... .++.. .++... +...+++-+. .
T Consensus 236 Div~~S~sK~lgg~g~~~gG~i~~~~--------------~li~~l~~~~~~~~~g~~~~~~~~---~a~~~l~gl~--~ 296 (427)
T 3i16_A 236 DLIAGSLIKNIGGGIAPTGGYLAGTK--------------DCIEKTSYRLTVPGIGGECGSTFG---VVRSMYQGLF--L 296 (427)
T ss_dssp SEEEEETTSGGGTTTCCSCEEEEECH--------------HHHHHHHHHHSCTTTGGGCCCCTT---CHHHHHHHHH--H
T ss_pred eEEEecCcccCCCCCCceEEEEEECH--------------HHHHHHHHhcccCccCccCCccHH---HHHHHHHHHH--H
Confidence 9999999999987 8899999987 5666554422 22221 122111 0111222211 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 354 YKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 354 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
.....++..+++..+++.|+++|+++.++
T Consensus 297 ~~~r~~~~~~~a~~la~~L~~~g~~V~p~ 325 (427)
T 3i16_A 297 APHISMEALKGAILCSRIMELAGFEVMPK 325 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeecCC
Confidence 35678899999999999999999988543
No 152
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.90 E-value=5.6e-23 Score=213.03 Aligned_cols=352 Identities=15% Similarity=0.150 Sum_probs=219.6
Q ss_pred hhhhhhcCHH-HHHHHHHHHHh-cccCeeecCC---CC----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHH
Q 010058 54 NAPLEEIDPE-IADIIELEKAR-QWKGLELIPS---EN----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 124 (519)
Q Consensus 54 ~~~l~~~~~~-~~~~~~~e~~~-~~~~i~L~a~---en----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le 124 (519)
.+++...++. ++.+....... ..+.|+|..+ ++ ++++.|.+++.+.+.+....+| +...+..+++
T Consensus 25 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y------~~~~g~~~lr 98 (420)
T 4f4e_A 25 FSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGY------LPIDGIAAYD 98 (420)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCC------CCTTCCHHHH
T ss_pred hhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCC------CCCCCcHHHH
Confidence 4555666655 44444443322 2466899877 22 2348999999998875222233 3334456777
Q ss_pred HHHHHHHHHHcCC--CCCCCcceEEeCCcHH-HHHHH--HHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeE
Q 010058 125 SLCQKRALDAFQL--DPAKWGVNVQSLSGSP-ANFQV--YTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFE 199 (519)
Q Consensus 125 ~~~~~~~~~~~g~--~~~~~~~~V~~~sGs~-a~~~~--~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 199 (519)
+.+.+++....+. +++. .+|++|+|++ |+..+ +.++++|||+|+++++.|.++.. .+...|..+.
T Consensus 99 ~~ia~~l~~~~~~~~~~~~--~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~~ 168 (420)
T 4f4e_A 99 ASVQKLLLGDDSPLIAAGR--VVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRA--------LFDMAGFEVV 168 (420)
T ss_dssp HHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHTTCCEE
T ss_pred HHHHHHhcCCCccccccCc--eEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHH--------HHHHcCCeEE
Confidence 6666666544432 3321 1589999988 77767 45778999999999977766643 2333455555
Q ss_pred EEeeeeCCCCCCCCHHHHHHHhhh--hCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccC-C
Q 010058 200 TMPYRLDESTGYIDYEQLEKSAAL--FRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAG-V 271 (519)
Q Consensus 200 ~v~~~~d~~~~~iD~d~l~~~i~~--~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~-~ 271 (519)
.+++. +++++.+|++++++.+++ .++++|+++ ++| +|...+ +++|.++|+++|+++|+|++|. ++...+ .
T Consensus 169 ~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~-~~~~~~~~ 246 (420)
T 4f4e_A 169 AYPYY-DAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQ-GFGESIEA 246 (420)
T ss_dssp EEECE-ETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TSSSCTTG
T ss_pred Eeeee-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccc-cccCCcch
Confidence 66542 335688999999999973 267788887 666 786654 6688889999999999999963 222211 0
Q ss_pred CCCC------CCCCeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHH----HhhhcccCCCCCCccHHHH
Q 010058 272 IPSP------FEYADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYED----KINQAVFPGLQGGPHNHTI 339 (519)
Q Consensus 272 ~~~p------~~~~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~----~i~~~~~~~~~g~~~~~~i 339 (519)
...+ ....++++.|++|++ +|+|.|++++..... ++.. .+....... ..+++....
T Consensus 247 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~~~~~ 314 (420)
T 4f4e_A 247 DAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSK-----------DEAARVLSQLKRVIRTN-YSNPPTHGG 314 (420)
T ss_dssp GGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSH-----------HHHHHHHHHHHHHHHTT-TSSCCSHHH
T ss_pred hhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCH-----------HHHHHHHHHHHHHHhcc-cCCCCHHHH
Confidence 0000 114578899999987 488889987522100 2222 221111111 123333333
Q ss_pred HHHHHHHHHhc-----CHhHHHHHHHHHHHHHHHHHHHHhc----CCEEecCCCCcceeeeeccCCCCcHHHHHHhhccc
Q 010058 340 SGLAVALKQVK-----TPEYKAYQEQVLSNSSKFARSLLER----GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESV 410 (519)
Q Consensus 340 aal~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~ 410 (519)
.+++.++.... ....++.++++.++++.+.+.|++. |+.+..+. .+.+.|+. ++...+.+.|.++
T Consensus 315 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~-----~~~~~~~~~l~~~ 388 (420)
T 4f4e_A 315 AIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQ-RGMFSYSG-----LTSAQVDRLREEF 388 (420)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHS-CSSEEECC-----CCHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCC-ccEEEEeC-----CCHHHHHHHHHhC
Confidence 33343443211 2335778889999999999999987 55554432 23344443 3467788888899
Q ss_pred CeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 411 HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 411 gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
||.+. |+ .|+++...+ +++++++++.|.+++
T Consensus 389 gI~v~----~~---------~Ris~~~~~-----~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 389 GIYAV----ST---------GRICVAALN-----TRNLDVVANAIAAVL 419 (420)
T ss_dssp CEECC----TT---------SEEEGGGCC-----TTTHHHHHHHHHHHH
T ss_pred CEEec----CC---------CeEEEecCC-----HHHHHHHHHHHHHHh
Confidence 99986 31 388876444 478999999998875
No 153
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.90 E-value=1.8e-22 Score=214.26 Aligned_cols=319 Identities=13% Similarity=0.096 Sum_probs=202.7
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcC--------CC-----C-EEEEecCCCccc
Q 010058 115 GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLK--------PH-----E-RIMALDLPHGGH 179 (519)
Q Consensus 115 ~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~--------pG-----D-~Vl~~~~~~~~~ 179 (519)
.......++|+.+++++++++|++.+. .++.+++|++ ||..++.++.. +| + .|++++..|.++
T Consensus 125 ~~~~~~~~le~~~~~~la~~~g~~~~~--~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~ 202 (504)
T 2okj_A 125 EIAPVFVLMEQITLKKMREIVGWSSKD--GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI 202 (504)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCSSS--CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred hhChHHHHHHHHHHHHHHHHhCCCCCC--CCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHH
Confidence 333667889999999999999997311 3578887777 88877777642 67 6 788887777666
Q ss_pred ccccccccCCceeeeee-eeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CCcEEEEc-ccc-ccccccHHHHHHHHhh
Q 010058 180 LSHGYQTDTKKISAVSI-FFETMPYRLDESTGYIDYEQLEKSAALF-----RPKLIVAG-ASA-YARLYDYARIRKVCDK 251 (519)
Q Consensus 180 ~~~~~~~~~~~v~~~g~-~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~klIi~~-~sn-~g~~~d~~~i~~ia~~ 251 (519)
........ + |. .+..++ .+ +++.+|+++|++++++. +|++|+++ ++| +|...|+++|+++|++
T Consensus 203 ~~~~~~~g---~---g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~ 273 (504)
T 2okj_A 203 KKAGAALG---F---GTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEK 273 (504)
T ss_dssp HHHHHHTT---S---CGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHH
T ss_pred HHHHHHcC---C---CcccEEEEe--cC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHH
Confidence 44322111 0 22 344554 44 46899999999999763 58888888 555 8999999999999999
Q ss_pred cCCEEEehhhhhhhccccCCCC---CCCCCCeEEEEcCCCcccCCCc-ceEEeecc-c-c----cc-c-ccCcchhhhHH
Q 010058 252 QKAVMLADMAHISGLVAAGVIP---SPFEYADVVTTTTHKSLRGPRG-AMIFFRKG-V-K----EI-N-KQGQEVMYAYE 319 (519)
Q Consensus 252 ~~~~livD~ah~~g~~~~~~~~---~p~~~~di~~~S~~K~l~Gprg-G~i~~~~~-~-~----~~-~-~~g~~~~~~~~ 319 (519)
+|+++++|+++..+........ ..+.++|++++++||++.+|.+ |+++++++ . . .. + ..++...+..
T Consensus 274 ~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~- 352 (504)
T 2okj_A 274 YNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDV- 352 (504)
T ss_dssp HTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCG-
T ss_pred cCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccC-
Confidence 9999999999887765422111 1123689999999999987875 99999874 2 1 01 1 1111100000
Q ss_pred HHhhhcccCCCCCC--ccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecC--CCCcceeeeecc
Q 010058 320 DKINQAVFPGLQGG--PHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSG--GTENHLVLVNLR 394 (519)
Q Consensus 320 ~~i~~~~~~~~~g~--~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~ 394 (519)
..+...+. .+.+ .... ++.+++..+...++++..++..++++++.+.|++. |++++.+ ...+. +.+...
T Consensus 353 -~~~~~~~~-~~~~rr~~~l---~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~-v~f~~~ 426 (504)
T 2okj_A 353 -SYDTGDKA-IQCGRHVDIF---KFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTN-VCFWYI 426 (504)
T ss_dssp -GGCCGGGS-SCSSCBCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSC-EEEEEC
T ss_pred -cCCcccCC-CCCCCCccHH---HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEE-EEEEEe
Confidence 00000000 0111 1122 22233443444678889999999999999999997 8988762 22222 222222
Q ss_pred CCC---C------------cHHHHHHhhcccCeE-EcccccCCCCCCCCCCeEEeccC-ccccCCCCHHHHHHHHHHHHH
Q 010058 395 NKG---I------------DGSRVEKVLESVHIA-ANKNTVPGDVSAMVPGGIRMGTP-ALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 395 ~~~---~------------~~~~~~~~L~~~gI~-v~~~~~p~~~~~~~~~~iRi~~~-~~ttrg~~~~di~~l~~~l~~ 457 (519)
+.+ . ...++.+.|.+.|+. +...... ...+.+|+++. ..++ ++|++++++.|.+
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~-----~~~~~lRis~~~~~~t----~edi~~~~~~l~~ 497 (504)
T 2okj_A 427 PQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQG-----DKANFFRMVISNPAAT----QSDIDFLIEEIER 497 (504)
T ss_dssp CGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEET-----TEEEEEEECCCCTTCC----HHHHHHHHHHHHH
T ss_pred CccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEEC-----CceEEEEEEeCCCCCC----HHHHHHHHHHHHH
Confidence 211 0 024566777777853 3311011 11257999985 7777 8999999999988
Q ss_pred HHH
Q 010058 458 AVK 460 (519)
Q Consensus 458 ~l~ 460 (519)
+++
T Consensus 498 ~~~ 500 (504)
T 2okj_A 498 LGQ 500 (504)
T ss_dssp HHT
T ss_pred HHH
Confidence 764
No 154
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.90 E-value=2.3e-22 Score=213.06 Aligned_cols=343 Identities=13% Similarity=0.062 Sum_probs=217.8
Q ss_pred CCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhh--
Q 010058 86 NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTAL-- 162 (519)
Q Consensus 86 n~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~al-- 162 (519)
++.++.+++++.....|. + ...|.......++|+.+++++++++|++... .+.+++|++ ||..++.++
T Consensus 110 ~~~~~~v~~~~~~~~~n~----~--~~~~~~~~~~~~le~~~~~~la~~~g~~~~~---~~~~t~ggt~a~~~al~~ar~ 180 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQ----S--MDSWDQASSATYVEQKVVNWLCDKYDLSEKA---DGIFTSGGTQSNQMGLMLARD 180 (497)
T ss_dssp CCBHHHHHHHHHHHHHCC----C--TTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC---EEEEESSHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhcc----c--ccchhhChHHHHHHHHHHHHHHHHhCCCCCC---CeEEcCCchHHHHHHHHHHHH
Confidence 356788888876655442 1 1223444567889999999999999996532 477777766 888777763
Q ss_pred --c---------CC------CC-EEEEecCCCcccccccccccCCceeeeee---eeEEEeeeeCCCCCCCCHHHHHHHh
Q 010058 163 --L---------KP------HE-RIMALDLPHGGHLSHGYQTDTKKISAVSI---FFETMPYRLDESTGYIDYEQLEKSA 221 (519)
Q Consensus 163 --l---------~p------GD-~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~v~~~~d~~~~~iD~d~l~~~i 221 (519)
+ .+ || .|++.+..|.+...... ..|. .+..++ .+ +++.+|+++|++++
T Consensus 181 ~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~--------~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i 249 (497)
T 2qma_A 181 WIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSAS--------WMGLGEKAVMTVD--AN-ADGTMDITKLDEVI 249 (497)
T ss_dssp HHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHH--------HTTSCGGGEEEEC--BC-TTSSBCGGGHHHHH
T ss_pred HHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHH--------HcCCCcccEEEEe--cC-CCCcCCHHHHHHHH
Confidence 3 13 46 78888777766543222 2222 344454 44 46899999999998
Q ss_pred hhh---CCc--EEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCCCCeEEEEcCCCcccC
Q 010058 222 ALF---RPK--LIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFEYADVVTTTTHKSLRG 292 (519)
Q Consensus 222 ~~~---k~k--lIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~~~di~~~S~~K~l~G 292 (519)
++. .++ +|+++ ++| +|...|+++|+++|++||+++++|++|..+....... -..++.+|++++|+||++.+
T Consensus 250 ~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~ 329 (497)
T 2qma_A 250 AQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQ 329 (497)
T ss_dssp HHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCC
T ss_pred HHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCC
Confidence 763 233 66666 555 7999999999999999999999999988776544311 01123679999999999988
Q ss_pred CCc-ceEEeecccccccc-cCcchhhhHHH-HhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Q 010058 293 PRG-AMIFFRKGVKEINK-QGQEVMYAYED-KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFA 369 (519)
Q Consensus 293 prg-G~i~~~~~~~~~~~-~g~~~~~~~~~-~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~ 369 (519)
|.+ |+++++++..+.+. .+......-.. ..+.. .....++... ...++.++++.+...++++..++..++++++.
T Consensus 330 p~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~-~~~~~~~r~~-~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~ 407 (497)
T 2qma_A 330 TISCGALLVNDKSNFKFLLHHADYLNREHDELPNLV-DKSIATTKRF-DALKVFMTMQNVGPKALGDMYDHLLAQTLEVA 407 (497)
T ss_dssp CSSCEEEEESCGGGGGGGCC---------------------CCSCCC-THHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEeCHHHHHHhcCCchhcCCccccCCCcc-ccCCCCCCch-hHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 865 99988875221110 00000000000 00000 0000001000 11234556776666678899999999999999
Q ss_pred HHHHhc-CCEEecCCCCcceeeeeccCCCCcH----HHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc-CccccCCC
Q 010058 370 RSLLER-GYDLVSGGTENHLVLVNLRNKGIDG----SRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGF 443 (519)
Q Consensus 370 ~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~-~~~ttrg~ 443 (519)
+.|++. |++++.+.. ..++.+.+.+.+.+. .++.+.|.+.|+.+...... .+.+.+|+++ +..++
T Consensus 408 ~~L~~~~~~~~~~~~~-~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~-----~g~~~lRis~~~~~~t--- 478 (497)
T 2qma_A 408 DMIRTNDQFELLAEPS-LSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIV-----DGKTALKFTILNPCLT--- 478 (497)
T ss_dssp HHHHTCTTEEECSCCS-SSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEE-----TTEEEEEEECCCTTCC---
T ss_pred HHHhhCCCeEEEcCCC-ceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEE-----CCEEEEEEEecCCCCC---
Confidence 999997 888865432 335555554322121 34556677789887421111 1235799997 77777
Q ss_pred CHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~ 460 (519)
++|++++++.|.+++.
T Consensus 479 -~edi~~~~~~l~~~~~ 494 (497)
T 2qma_A 479 -TSDFESLLSKINMLAV 494 (497)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 8999999999998875
No 155
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.90 E-value=6.9e-22 Score=207.00 Aligned_cols=335 Identities=14% Similarity=0.145 Sum_probs=207.0
Q ss_pred CeeecCCCC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHH
Q 010058 78 GLELIPSEN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPAN 155 (519)
Q Consensus 78 ~i~L~a~en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~ 155 (519)
.+++.++.+ .+++.+.+++.. + ...|.......+++ +.+++++|.+. .+++++|+.|+
T Consensus 44 ylD~~~~~~~~~~~~~~~~a~~~--------~---~~~y~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~ 103 (456)
T 2ez2_A 44 YIDLLTDSGTNAMSDKQWAGMMM--------G---DEAYAGSENFYHLE----RTVQELFGFKH-----IVPTHQGRGAE 103 (456)
T ss_dssp SEECSCSSSCCCCCHHHHHHHTT--------C---CCCSSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHHHH
T ss_pred eeeeccccCCccCCHHHHHHhhc--------c---hhhcccChhHHHHH----HHHHHHhCCCc-----EEEeCCcHHHH
Confidence 467766554 456888887752 1 12244456666666 77788888753 35555566698
Q ss_pred HHHHHhhcCCCCEEEEecCCC-cccccccccccCCceeeeeeeeEEEeeeeC--CC-----CCCCCHHHHHHHhhhhCC-
Q 010058 156 FQVYTALLKPHERIMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYRLD--ES-----TGYIDYEQLEKSAALFRP- 226 (519)
Q Consensus 156 ~~~~~all~pGD~Vl~~~~~~-~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d--~~-----~~~iD~d~l~~~i~~~k~- 226 (519)
..++.++++||| +++++.| +.+.. .+...|..+..++++.+ ++ ++.+|+++|++++++ ++
T Consensus 104 ~~al~~l~~~gd--i~~~~~~~~~~~~--------~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~t~ 172 (456)
T 2ez2_A 104 NLLSQLAIKPGQ--YVAGNMYFTTTRY--------HQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDE-KGA 172 (456)
T ss_dssp HHHHHHHCCTTC--EEEESSCCHHHHH--------HHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHH-HCG
T ss_pred HHHHHHhCCCCC--EeccccccchhHH--------HHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHh-ccc
Confidence 889999999999 5666665 44322 22334544444443211 22 267899999999986 45
Q ss_pred ---cEEEEc-ccc--cccccc---HHHHHHHHhhcCCEEEehhhhhhh---------ccccCCCCC-----CCCCCeEEE
Q 010058 227 ---KLIVAG-ASA--YARLYD---YARIRKVCDKQKAVMLADMAHISG---------LVAAGVIPS-----PFEYADVVT 283 (519)
Q Consensus 227 ---klIi~~-~sn--~g~~~d---~~~i~~ia~~~~~~livD~ah~~g---------~~~~~~~~~-----p~~~~di~~ 283 (519)
++|+++ ++| +|...+ +++|+++|++||++||+|++|..| ....+.... .....|+++
T Consensus 173 ~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~ 252 (456)
T 2ez2_A 173 ENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCT 252 (456)
T ss_dssp GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEE
T ss_pred cceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEE
Confidence 888887 665 577676 899999999999999999999876 223332100 002468888
Q ss_pred EcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhhccc--CC--CCCCccHHHHHHHHHHHHHhcCHhHHHHHH
Q 010058 284 TTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVF--PG--LQGGPHNHTISGLAVALKQVKTPEYKAYQE 359 (519)
Q Consensus 284 ~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~--~~--~~g~~~~~~iaal~~al~~~~~~~~~~~~~ 359 (519)
+|+||++..++||+++++++ ++.+.+..... .+ ..++.+...+++++.++..... +.+.+
T Consensus 253 ~S~kk~~~~~~gG~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~ 316 (456)
T 2ez2_A 253 MSGKKDCLVNIGGFLCMNDD-------------EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIE 316 (456)
T ss_dssp EETTTTTCCSSCEEEEESCH-------------HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHH
T ss_pred EeCcccCCCCceeEEEECCH-------------HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHH
Confidence 88899766567899998432 34333322110 11 1122233344443333322111 45677
Q ss_pred HHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccC--CCCcHHHH-----HHhh-cccCeEEccc---ccCCCC-----
Q 010058 360 QVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRN--KGIDGSRV-----EKVL-ESVHIAANKN---TVPGDV----- 423 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~--~~~~~~~~-----~~~L-~~~gI~v~~~---~~p~~~----- 423 (519)
+..++.+++.+.|.+.|++++.+ ...+++++++.. .+.+..++ .+.| .++||.+... +.+...
T Consensus 317 ~~~~~~~~l~~~L~~~g~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~ 395 (456)
T 2ez2_A 317 HRVKQVRYLGDKLKAAGVPIVEP-VGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEH 395 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCCBCSS-CCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSB
T ss_pred HHHHHHHHHHHHHhcCCCccccC-CCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCcccccc
Confidence 77888889999998888876654 234566666531 23344444 5555 6889975321 111110
Q ss_pred CCCCCCeEEeccCcc-ccCCCCHHHHHHHHHHHHHHHHHHhh
Q 010058 424 SAMVPGGIRMGTPAL-TSRGFVEEDFEKVAEFFDAAVKLALK 464 (519)
Q Consensus 424 ~~~~~~~iRi~~~~~-ttrg~~~~di~~l~~~l~~~l~~~~~ 464 (519)
.....+.|||+++.. ++ ++|++++++.|.+++.....
T Consensus 396 ~~~~~~~iRis~~~~~~t----~e~i~~~~~~l~~~l~~~~~ 433 (456)
T 2ez2_A 396 HRPKLETVRLTIPRRVYT----YAHMDVVADGIIKLYQHKED 433 (456)
T ss_dssp CCCSCCEEEEECCTTTCC----HHHHHHHHHHHHHHHHTGGG
T ss_pred ccCCCCeEEEEeCCCCCC----HHHHHHHHHHHHHHHhhhhh
Confidence 112246899998865 55 89999999999999876443
No 156
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.90 E-value=1.5e-22 Score=215.36 Aligned_cols=318 Identities=13% Similarity=0.086 Sum_probs=203.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhc-------C-CCC------EEEEecCCCcc
Q 010058 114 YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALL-------K-PHE------RIMALDLPHGG 178 (519)
Q Consensus 114 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all-------~-pGD------~Vl~~~~~~~~ 178 (519)
|...+...++|+.+++++++++|++.+ ++.+++|++ ||..++.++. + +|| +|++++..|.+
T Consensus 140 ~~~s~~~~~le~~~~~~la~l~g~~~~----~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s 215 (515)
T 2jis_A 140 YEIAPVFVLMEEEVLRKLRALVGWSSG----DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS 215 (515)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTCSSC----EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred hhhchHHHHHHHHHHHHHHHHhCCCCC----CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence 344467788999999999999999853 577777776 8887777763 2 686 78888877766
Q ss_pred cccccccccCCceeeeee---eeEEEeeeeCCCCCCCCHHHHHHHhhhh-----CCcEEEEc-ccc-ccccccHHHHHHH
Q 010058 179 HLSHGYQTDTKKISAVSI---FFETMPYRLDESTGYIDYEQLEKSAALF-----RPKLIVAG-ASA-YARLYDYARIRKV 248 (519)
Q Consensus 179 ~~~~~~~~~~~~v~~~g~---~~~~v~~~~d~~~~~iD~d~l~~~i~~~-----k~klIi~~-~sn-~g~~~d~~~i~~i 248 (519)
...... ..|. .+..++ .+ +++.+|+++|++++.+. +|++|+++ ++| +|...|+++|+++
T Consensus 216 ~~~~~~--------~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~l 284 (515)
T 2jis_A 216 IQKGAA--------FLGLGTDSVRVVK--AD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADV 284 (515)
T ss_dssp HHHHHH--------HTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHH
T ss_pred HHHHHH--------HcCCCCCcEEEEe--cC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHH
Confidence 654322 2232 344554 44 46889999999999763 48888888 555 8999999999999
Q ss_pred HhhcCCEEEehhhhhhhccccCCCCC---CCCCCeEEEEcCCCcccCCCc-ceEEeecc--c-cc-----cc-ccCcchh
Q 010058 249 CDKQKAVMLADMAHISGLVAAGVIPS---PFEYADVVTTTTHKSLRGPRG-AMIFFRKG--V-KE-----IN-KQGQEVM 315 (519)
Q Consensus 249 a~~~~~~livD~ah~~g~~~~~~~~~---p~~~~di~~~S~~K~l~Gprg-G~i~~~~~--~-~~-----~~-~~g~~~~ 315 (519)
|+++|+++++|++|..+....+.... .+.++|++++++||++.+|.+ |+++++++ . .. .+ ..++...
T Consensus 285 a~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~ 364 (515)
T 2jis_A 285 CQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKF 364 (515)
T ss_dssp HHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CC
T ss_pred HHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCccc
Confidence 99999999999998877765432111 123689999999999988876 99999875 2 10 01 1111100
Q ss_pred hhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCcceeeeecc
Q 010058 316 YAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTENHLVLVNLR 394 (519)
Q Consensus 316 ~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~ 394 (519)
+. ...+... +..+.+.... ..++.+++..+...++++..++..++++++.+.|++. |++++.+...+ .+.+...
T Consensus 365 ~~--~~~~~~~-~~~~~~rr~~-al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~-~v~f~~~ 439 (515)
T 2jis_A 365 YD--VALDTGD-KVVQCGRRVD-CLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFV-NVCFWFV 439 (515)
T ss_dssp SC--GGGCCGG-GCSCSSCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSS-EEEEEEC
T ss_pred cc--ccCCCCC-CCCCCCCccc-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCee-EEEEEEe
Confidence 00 0000000 0011110000 1123333444445678889999999999999999998 89887653222 2222222
Q ss_pred CCCC----cH-----------HHHHHhhcccCeEEcc-cccCCCCCCCCCCeEEecc-CccccCCCCHHHHHHHHHHHHH
Q 010058 395 NKGI----DG-----------SRVEKVLESVHIAANK-NTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 395 ~~~~----~~-----------~~~~~~L~~~gI~v~~-~~~p~~~~~~~~~~iRi~~-~~~ttrg~~~~di~~l~~~l~~ 457 (519)
+.++ +. ..+.+.|.+.|+.+-. ...+ ...+.+|+++ +..++ ++|++++++.|.+
T Consensus 440 p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~-----~~~~~lRis~~~~~~t----~edid~~~~~l~~ 510 (515)
T 2jis_A 440 PPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHG-----TRGNFFRVVVANSALT----CADMDFLLNELER 510 (515)
T ss_dssp CGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEET-----TEEEEEEEECCCTTCC----HHHHHHHHHHHHH
T ss_pred CccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEEC-----CceEEEEEEeCCCCCC----HHHHHHHHHHHHH
Confidence 2111 11 1245556667765421 0001 1135799999 78888 8999999999988
Q ss_pred HHH
Q 010058 458 AVK 460 (519)
Q Consensus 458 ~l~ 460 (519)
+++
T Consensus 511 ~~~ 513 (515)
T 2jis_A 511 LGQ 513 (515)
T ss_dssp HHT
T ss_pred HHh
Confidence 764
No 157
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.90 E-value=7.2e-23 Score=216.36 Aligned_cols=341 Identities=11% Similarity=0.046 Sum_probs=213.6
Q ss_pred cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC-----cceEEeCCcHH-HHHHHHHhh
Q 010058 89 SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKW-----GVNVQSLSGSP-ANFQVYTAL 162 (519)
Q Consensus 89 ~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~-----~~~V~~~sGs~-a~~~~~~al 162 (519)
+..+.+++.+.++. + ...|.......++|+.+++++++++|++.+.. ...+.+++|++ ||+.++.++
T Consensus 87 ~~~~~~~~~~~~n~-~------~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~ 159 (486)
T 1js3_A 87 PAMLADMLCGAIGC-I------GFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAA 159 (486)
T ss_dssp HHHHHHHHHHHHCC-C------CSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-C------ccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHH
Confidence 44566777666532 2 12234446688999999999999999974200 01355666665 888777665
Q ss_pred cCC---------CC--------E--EEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh
Q 010058 163 LKP---------HE--------R--IMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL 223 (519)
Q Consensus 163 l~p---------GD--------~--Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~ 223 (519)
.++ || + |++++..|.++.. .+...|..++.++ ++ +++.+|+++|++++++
T Consensus 160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~--------~~~~~G~~v~~v~--~d-~~~~~d~~~L~~~i~~ 228 (486)
T 1js3_A 160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVER--------AGLIGGVKLKAIP--SD-GKFAMRASALQEALER 228 (486)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHH--------HHHHHTCEEEEEC--CC-TTSCCCHHHHHHHHHH
T ss_pred HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHH--------HHHhCCCceEEee--cC-CCCCCCHHHHHHHHHH
Confidence 321 43 3 6777877765433 2334466566665 44 5789999999999976
Q ss_pred hCC------cEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccC-CCC--CCCCCCeEEEEcCCCcccC
Q 010058 224 FRP------KLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAG-VIP--SPFEYADVVTTTTHKSLRG 292 (519)
Q Consensus 224 ~k~------klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~-~~~--~p~~~~di~~~S~~K~l~G 292 (519)
++ .+|+++ ++| +|...|+++|.++|++||+++++|+||..+..... ... ..+.++|++++++||++.+
T Consensus 229 -~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~ 307 (486)
T 1js3_A 229 -DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV 307 (486)
T ss_dssp -HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC
T ss_pred -HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC
Confidence 44 366666 655 89999999999999999999999999877655332 111 1223689999999999987
Q ss_pred CCc-ceEEeecccccc------c--ccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Q 010058 293 PRG-AMIFFRKGVKEI------N--KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLS 363 (519)
Q Consensus 293 prg-G~i~~~~~~~~~------~--~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~ 363 (519)
|.+ |+++++++..+. + ..++..... ...+...+ ..+++... ...++.+++..+...++++..++..+
T Consensus 308 p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~--~~~~~~~~-~~~~~rr~-~~~~~~~al~~~g~~g~~~~~~~~~~ 383 (486)
T 1js3_A 308 NFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSG--LITDYRHW-QLPLGRRF-RSLKMWFVFRMYGVKGLQAYIRKHVQ 383 (486)
T ss_dssp CSSCEEEEESCHHHHHGGGC------------CC--SCCCGGGS-SSCSCCCC-THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEeCHHHHHHHhcCCchhhCCCccccc--CCCCcccc-CCCCCCch-hHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 755 999998742100 0 000000000 00000000 00111111 23445556665555678999999999
Q ss_pred HHHHHHHHHHhc-CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc-CccccC
Q 010058 364 NSSKFARSLLER-GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSR 441 (519)
Q Consensus 364 ~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~-~~~ttr 441 (519)
+++++.+.|++. |++++.+. ...++.+.+.+.+....++.+.|.+.|+.+.. ++.. ...+.+|+++ ...++
T Consensus 384 ~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~~--~~~~~lRi~~~~~~~t- 456 (486)
T 1js3_A 384 LSHEFEAFVLQDPRFEVCAEV-TLGLVCFRLKGSDGLNEALLERINSARKIHLV---PCRL--RGQFVLRFAICSRKVE- 456 (486)
T ss_dssp HHHHHHHHHHHCTTEEECSCC-CSSEEEEEESSCHHHHHHHHHHHHHHTSCBCE---EEEE--TTEEEEEEECCCTTCC-
T ss_pred HHHHHHHHHhcCCCeEEeCCC-ceeEEEEEecChHHHHHHHHHHHHhcCCEEEE---EEEE--CCEEEEEEEeCCCCCC-
Confidence 999999999998 89887642 22333333322110135677777777765321 1110 1246899996 44566
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 010058 442 GFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 442 g~~~~di~~l~~~l~~~l~~~ 462 (519)
++|++++++.|.+++...
T Consensus 457 ---~~di~~~~~~l~~~~~~~ 474 (486)
T 1js3_A 457 ---SGHVRLAWEHIRGLAAEL 474 (486)
T ss_dssp ---HHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHH
Confidence 899999999999988653
No 158
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.90 E-value=2.1e-22 Score=202.27 Aligned_cols=304 Identities=13% Similarity=0.116 Sum_probs=208.1
Q ss_pred cCeeecCCCCC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC---CCCCCCcceEEeCCc
Q 010058 77 KGLELIPSENF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ---LDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g---~~~~~~~~~V~~~sG 151 (519)
+.|+|..+++. +++.+.+++.+.+......+|+.. ...+++ +.++++++ ++++ +|.+++|
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-------~~~~lr----~~la~~~~~~~~~~~----~v~~~~G 84 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS-------PDEELI----EKILSYLDTDFLSKN----NVSVGNG 84 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS-------SCHHHH----HHHHHHHTCSSCCGG----GEEEESS
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-------chHHHH----HHHHHHcCCCCCCHH----HEEEcCC
Confidence 46899888884 589999999987732111133321 234555 77777787 6653 5999999
Q ss_pred HH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEE
Q 010058 152 SP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIV 230 (519)
Q Consensus 152 s~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi 230 (519)
++ ++..++.++ ||+|++. +.|.++.. .+...|..+..++ .+ +++.+|++++ + ++++|+
T Consensus 85 ~~~al~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l-----~-~~~~v~ 143 (335)
T 1uu1_A 85 ADEIIYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGAKFLEVP--LT-KDLRIPEVNV-----G-EGDVVF 143 (335)
T ss_dssp HHHHHHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTCEEEECC--CC-TTSCCCCCCC-----C-TTEEEE
T ss_pred hHHHHHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCCeEEEec--cC-CCCCCCHHHc-----C-CCCEEE
Confidence 87 777777777 9999988 77766543 1222344444443 44 3467888776 3 789998
Q ss_pred Ec-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC-CCCCCCeEEEEcCCCcc--cCCCcceEEeecccc
Q 010058 231 AG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP-SPFEYADVVTTTTHKSL--RGPRGAMIFFRKGVK 305 (519)
Q Consensus 231 ~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~-~p~~~~di~~~S~~K~l--~GprgG~i~~~~~~~ 305 (519)
++ ++| +|...+.+++.++++.+| ++|+|++|..... ..... ......++++.|+||++ +|.|.|++++++
T Consensus 144 l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--- 218 (335)
T 1uu1_A 144 IPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHG-ESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--- 218 (335)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHC-CCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH---
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcc-hhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCH---
Confidence 76 766 899999999999999989 9999999874221 11000 00014578999999987 467789999977
Q ss_pred cccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCC
Q 010058 306 EINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTE 385 (519)
Q Consensus 306 ~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 385 (519)
++.+.+.....+ .+++....+++..+++. ...+++..+++.++++++.+.|++.|+.+..+ .
T Consensus 219 -----------~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~ 280 (335)
T 1uu1_A 219 -----------KFIDAYNRVRLP---FNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS--R 280 (335)
T ss_dssp -----------HHHHHHHHHSCT---TCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--C
T ss_pred -----------HHHHHHHHhcCC---CCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCcEEcCC--C
Confidence 555555443322 25566666666667764 23467888999999999999999888765432 2
Q ss_pred cceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 386 NHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 386 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
..++++.+.. .+..++.+.|.++||.++ | ..+++|+++. + ++|++++++.|+++
T Consensus 281 ~~~~~~~~~~--~~~~~~~~~l~~~gi~v~----~------~~~~iRis~~---~----~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 281 GNFVFVFMEK--EEKERLLEHLRTKNVAVR----S------FREGVRITIG---K----REENDMILRELEVF 334 (335)
T ss_dssp SSEEEEECCT--HHHHHHHHHHHHHTEEEE----E------ETTEEEEECC---C----HHHHHHHHHHHHCC
T ss_pred CeEEEEECCC--CCHHHHHHHHHHCCEEEE----E------CCCeEEEEeC---C----HHHHHHHHHHHHhh
Confidence 3456666532 356678888888999997 3 2468999974 3 57899998888653
No 159
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.90 E-value=1e-22 Score=206.15 Aligned_cols=330 Identities=12% Similarity=0.042 Sum_probs=202.9
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQV 158 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~ 158 (519)
-.|..+.++..+++++++.+.+. +..+...|+......+++ +++++++|.+. .+.+++|+.++..+
T Consensus 13 ~~l~~~~~p~~~~~~~~~~~~~~-----~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~a 78 (357)
T 3lws_A 13 TGQISGHGKRNVGVLKTAFAAVA-----DEMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVA 78 (357)
T ss_dssp SEESSBSSCCBHHHHHHHHTTSC-----TTCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHHHHhh-----cccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHH
Confidence 34666777777766666544221 112234455556667777 78888999864 48888888888889
Q ss_pred HHhhcCCCC--EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc
Q 010058 159 YTALLKPHE--RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA 235 (519)
Q Consensus 159 ~~all~pGD--~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn 235 (519)
+.++++||| .|++.+..|........ .....|..+..+ + .+++.+|+++++++. ++++|+++ ++|
T Consensus 79 l~~~~~~gd~~~vi~~~~~~~~~~~~~~-----~~~~~g~~~~~v--~--~~~~~~d~~~l~~~~---~~~~v~~~~p~n 146 (357)
T 3lws_A 79 LRIWSDETDNRTVAYHPLCHLEIHEQDG-----LKELHPIETILV--G--AADRLMTLDEIKALP---DIACLLLELPQR 146 (357)
T ss_dssp HHHHHHHHTCCEEEECTTCHHHHSSTTH-----HHHHSSCEEEEC--S--CTTSCCCHHHHHTCC---SCSEEEEESSBG
T ss_pred HHHHhhcCCCcEEEecccceeeeeccch-----hhhccCcEEEEe--c--CCCCCcCHHHHhcCc---CcceEEEEcccc
Confidence 999999999 66665544433322110 111224333333 3 245789999999872 48999888 555
Q ss_pred -c-ccccc---HHHHHHHHhhcCCEEEehhhhhhhccc-cCCCCCCC-CCCeEEEEcCCCcccCCCcceEEeeccccccc
Q 010058 236 -Y-ARLYD---YARIRKVCDKQKAVMLADMAHISGLVA-AGVIPSPF-EYADVVTTTTHKSLRGPRGAMIFFRKGVKEIN 308 (519)
Q Consensus 236 -~-g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~-~~~~~~p~-~~~di~~~S~~K~l~GprgG~i~~~~~~~~~~ 308 (519)
+ |...+ +++|.++|++||++||+|++|..+... .+....++ ...|+++.|+||+++||.||++++++
T Consensus 147 p~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~------ 220 (357)
T 3lws_A 147 EIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPA------ 220 (357)
T ss_dssp GGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECH------
T ss_pred cCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCH------
Confidence 4 76664 889999999999999999998632211 11110000 25788999999999899999998887
Q ss_pred ccCcchhhhHHHHhhhcc--cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCC
Q 010058 309 KQGQEVMYAYEDKINQAV--FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLVSGGTE 385 (519)
Q Consensus 309 ~~g~~~~~~~~~~i~~~~--~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 385 (519)
++.+.+.... +.+.....+....++ ..+++. +.+..+++.++++++.+.|+++ |+.+....+.
T Consensus 221 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 286 (357)
T 3lws_A 221 --------AFCQTARIWKRRYGGDLISLYPYIVSA-DYYYEL-----RKDRMGQYYEQAKQLAEQFNALPGVHTTPEVPV 286 (357)
T ss_dssp --------HHHHHHHHHHHHTTCCCSCCHHHHHHH-HHHHHH-----HTTCHHHHHHHHHHHHHHHHTSTTEEEESSSCS
T ss_pred --------HHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHH-----HHHHHHHHHHHHHHHHHHHHhCCCCeeccCCCc
Confidence 4444443211 111111122222222 234443 2223445678889999999998 8887433344
Q ss_pred cceeeeeccCCC-CcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 386 NHLVLVNLRNKG-IDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 386 ~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.+++++++...+ .+..++.+.|.++||.++ |+.......+.+|+++..... ...++++++.++.|.+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~----~g~~~~~~~~~~r~~i~~~~~-~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 287 SNMFHLHFDGQAADISPKLEQVQEETGLGFV----GYLVDKDGYCSTEISVGDAYG-ELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp SSEEEEEEESCHHHHHHHHHHHHHHHCEESC----SCCEECSSEEEEEEEBCTTGG-GSCHHHHHHHHHHHHHHC
T ss_pred ceEEEEEecCChHHHHHHHHHHHHhcCeEEe----cccccCCCceEEEEEecchhh-hcCHHHHHHHHHHHHHhc
Confidence 567787775321 125678888999999997 443211123479987654321 112677777777766543
No 160
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.89 E-value=3e-22 Score=206.04 Aligned_cols=345 Identities=13% Similarity=0.106 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHhcc-cCeeecCCCC-------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 010058 63 EIADIIELEKARQW-KGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA 134 (519)
Q Consensus 63 ~~~~~~~~e~~~~~-~~i~L~a~en-------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~ 134 (519)
.++........... +.|+|..+.. ++.+.+.+++...+.+....+| ....+..++++.+.+++.+.
T Consensus 14 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~~~~~ 87 (401)
T 7aat_A 14 PILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEY------LPIAGLADFTRASAELALGE 87 (401)
T ss_dssp HHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCC------CCTTCCHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCC------CCCCCCHHHHHHHHHHhcCC
Confidence 34555544333332 3588876652 1235788888876653222233 33344567776666777666
Q ss_pred cCC--CCCCCcceEEe--CCcHH-HHHHHHHhh---cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC
Q 010058 135 FQL--DPAKWGVNVQS--LSGSP-ANFQVYTAL---LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD 206 (519)
Q Consensus 135 ~g~--~~~~~~~~V~~--~sGs~-a~~~~~~al---l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d 206 (519)
+|. +++ +|.+ |+|++ ++..++.++ ++|||+|+++++.|.++... +...|..+..+++. +
T Consensus 88 ~~~~~~~~----~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~--------~~~~g~~~~~~~~~-~ 154 (401)
T 7aat_A 88 NSEAFKSG----RYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPI--------FRDAGLQLQAYRYY-D 154 (401)
T ss_dssp TCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHH--------HHHTTCEEEEEECE-E
T ss_pred CccccccC----ceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHH--------HHHcCCeeEeeeee-c
Confidence 664 243 4765 88887 777666655 49999999999888776542 23345555555543 2
Q ss_pred CCCCCCCHHHHHHHhhh--hCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCC--CCC---
Q 010058 207 ESTGYIDYEQLEKSAAL--FRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGV--IPS--- 274 (519)
Q Consensus 207 ~~~~~iD~d~l~~~i~~--~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~--- 274 (519)
++++.+|++++++.+.+ .++++|+++ ++| +|...+ +++|.++|++||+++|+|++|..... .+. ...
T Consensus 155 ~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~-~~~~~~~~~~~ 233 (401)
T 7aat_A 155 PKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFAS-GDINRDAWALR 233 (401)
T ss_dssp TTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTT-SCHHHHTHHHH
T ss_pred cccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccC-CCccccHHHHH
Confidence 24688999988877763 267888887 666 785554 77888999999999999999653221 110 000
Q ss_pred ---CCCCCeEEEEcCCCcc--cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh
Q 010058 275 ---PFEYADVVTTTTHKSL--RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV 349 (519)
Q Consensus 275 ---p~~~~di~~~S~~K~l--~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~ 349 (519)
......+++.|+||++ .|+|.|++++...... ....+...+........ .++......+.+.++...
T Consensus 234 ~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 305 (401)
T 7aat_A 234 HFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAE-------EAKRVESQLKILIRPMY-SNPPMNGARIASLILNTP 305 (401)
T ss_dssp HHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHH-------HHHHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHCH
T ss_pred HHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHH-------HHHHHHHHHHHHHHhcc-CCCChHHHHHHHHHhCCH
Confidence 0013468889999986 6788899887321000 00012222222111111 122333333333233211
Q ss_pred c-----CHhHHHHHHHHHHHHHHHHHHHHhcC----CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccC
Q 010058 350 K-----TPEYKAYQEQVLSNSSKFARSLLERG----YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVP 420 (519)
Q Consensus 350 ~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p 420 (519)
. ....++.++++.++++++.+.|.+.| +.+..+ ..+.+.|+. ++.+.+..+|+++||.+.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~ll~~~gi~v~----- 374 (401)
T 7aat_A 306 ELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITD-QIGMFCFTG-----LKPEQVERLTKEFSIYMT----- 374 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHH-CCSSEEECC-----CCHHHHHHHHHHHCEECC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecC-CcceEEecC-----CCHHHHHHHHHhCCEecc-----
Confidence 0 12356778889999999999999886 443332 223344443 346677777788999984
Q ss_pred CCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 421 GDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 421 ~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+++||++...++ +|++++++.|++++
T Consensus 375 --------~~~Ris~~~~~~-----~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 375 --------KDGRISVAGVAS-----SNVGYLAHAIHQVT 400 (401)
T ss_dssp --------TTCEEEGGGCCT-----TTHHHHHHHHHHHH
T ss_pred --------CCCeEEeccCCh-----hhHHHHHHHHHHHh
Confidence 237999876665 66999999998875
No 161
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.89 E-value=1.1e-22 Score=208.57 Aligned_cols=313 Identities=13% Similarity=0.106 Sum_probs=202.0
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCC-
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKP- 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~p- 165 (519)
.+|.|.+++.+.+.+ + ++... .| ..+...+++ +++++++|.+ .+.+++|++ |+..++.++..+
T Consensus 53 ~~p~v~~a~~~~~~~-~--~~~~~-~~-~~~~~~~l~----~~la~~~g~~------~v~~~~~gt~a~~~al~~~~~~~ 117 (392)
T 3ruy_A 53 RHPKIINALIDQANR-V--TLTSR-AF-HSDQLGPWY----EKVAKLTNKE------MVLPMNTGAEAVETAIKTARRWA 117 (392)
T ss_dssp TCHHHHHHHHHHHTT-C--SCCCT-TS-EETTHHHHH----HHHHHHHTCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-c--ccccc-cc-CCHHHHHHH----HHHHHhcCCC------EEEEeCcHHHHHHHHHHHHHHhh
Confidence 479999999988765 2 12111 12 123344444 8888888833 366665555 888888876544
Q ss_pred ---------CCEEEEecCCCcccccccccccCC-ce--eeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-
Q 010058 166 ---------HERIMALDLPHGGHLSHGYQTDTK-KI--SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG- 232 (519)
Q Consensus 166 ---------GD~Vl~~~~~~~~~~~~~~~~~~~-~v--~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~- 232 (519)
||+|++.++.|.+........... .. .+.........++ ..|++++++++++ ++++|+++
T Consensus 118 ~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~~~~ 190 (392)
T 3ruy_A 118 YDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIP------YGDLEALKAAITP-NTAAFILEP 190 (392)
T ss_dssp HHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEEC------TTCHHHHHHHCCT-TEEEEEECS
T ss_pred hhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeC------cccHHHHHHHhcc-CeEEEEEeC
Confidence 789999988775543211110000 00 0000000011111 1289999999985 89999998
Q ss_pred ccc-cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCcccC--CCcceEEeec
Q 010058 233 ASA-YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSLRG--PRGAMIFFRK 302 (519)
Q Consensus 233 ~sn-~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l~G--prgG~i~~~~ 302 (519)
++| +|...+ +++|+++|++||+++|+|++|. |+...+.. . ...+ ..|++++| |+|+| .|+|++++++
T Consensus 191 ~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~~~~ 267 (392)
T 3ruy_A 191 IQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQT-GLGRTGKVFACDWDNVTPDMYILG--KALGGGVFPISCAAANR 267 (392)
T ss_dssp SBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEECH
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCccccchhhhccCCCCCEEEEc--hhhhCChhhhEEEEECH
Confidence 555 788887 9999999999999999999985 33221110 0 0001 36888776 88987 7899999987
Q ss_pred ccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecC
Q 010058 303 GVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSG 382 (519)
Q Consensus 303 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 382 (519)
++.+.+....... ..+++...++++.++++... .++..+++.++++++.+.|++.+...+..
T Consensus 268 --------------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 329 (392)
T 3ruy_A 268 --------------DILGVFEPGSHGS-TFGGNPLACAVSIAALEVLE---EEKLTERSLQLGEKLVGQLKEIDNPMITE 329 (392)
T ss_dssp --------------HHHTTCCTTSSCC-SSTTCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTTCCCTTEEE
T ss_pred --------------HHHhhhccCCcCC-CCCCCHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 5555443322221 23456666666667777543 25678889999999999999875322111
Q ss_pred -CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 383 -GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 383 -~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
.....++++.+.. +..++.+.|.+.||.++ |+. .+.+|++++..++ ++|++++++.|++++
T Consensus 330 ~~~~g~~~~~~~~~---~~~~l~~~l~~~gi~v~----~~~-----~~~iRi~~~~~~~----~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 330 VRGKGLFIGIELNE---PARPYCEQLKAAGLLCK----ETH-----ENVIRIAPPLVIS----EEDLEWAFQKIKAVL 391 (392)
T ss_dssp EEEETTEEEEEESS---CSHHHHHHHHTTTEECC----CBT-----TTEEEECCCTTCC----HHHHHHHHHHHHHHH
T ss_pred EEeeeeEEEEEEcc---hHHHHHHHHHHCCcEEe----cCC-----CCEEEEECCCCCC----HHHHHHHHHHHHHHh
Confidence 1123455555533 56788888889999996 432 5789999888777 899999999998876
No 162
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.89 E-value=4.3e-22 Score=204.38 Aligned_cols=329 Identities=13% Similarity=0.113 Sum_probs=204.6
Q ss_pred cCeeecCCC---C----CCcHHHHHHHhh-HhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceE
Q 010058 77 KGLELIPSE---N----FTSVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNV 146 (519)
Q Consensus 77 ~~i~L~a~e---n----~~~~~V~ea~~~-~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V 146 (519)
+.|+|..+. + ++++.|++++.+ .+.+....+|+ ...+..++++.+.+++....+. +++. .+|
T Consensus 27 ~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~------~~~g~~~lr~~la~~~~~~~~~~~~~~~--~~i 98 (397)
T 3fsl_A 27 DKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYL------PMEGLNCYRHAIAPLLFGADHPVLKQQR--VAT 98 (397)
T ss_dssp CCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCC------CTTCCHHHHHHHHHHHHCTTCHHHHTTC--EEE
T ss_pred CeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCC------CCCchHHHHHHHHHHHhcCCcccccccc--eEE
Confidence 568887772 2 234899999998 77652222333 2234456765555555443332 3421 158
Q ss_pred EeCCcHH-HHHHH--HHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh
Q 010058 147 QSLSGSP-ANFQV--YTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL 223 (519)
Q Consensus 147 ~~~sGs~-a~~~~--~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~ 223 (519)
++++|++ ++..+ +.++++|||+|++.++.|.++.. .+...|..+..+++. +++++.+|++++++.+++
T Consensus 99 ~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~ 169 (397)
T 3fsl_A 99 IQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVA--------IFAGAGFEVSTYPWY-DEATNGVRFNDLLATLKT 169 (397)
T ss_dssp EEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHH--------HHHHTTCCEEEECCE-ETTTTEECHHHHHHHHTT
T ss_pred EEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHH--------HHHHcCCceEEEeee-eccCCcCcHHHHHHHHHh
Confidence 9999988 77766 45678999999999977766543 222345555555542 224688999999999984
Q ss_pred --hCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC------CCCCeEEEEcCCCcc
Q 010058 224 --FRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP------FEYADVVTTTTHKSL 290 (519)
Q Consensus 224 --~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p------~~~~di~~~S~~K~l 290 (519)
.++++++++ ++| +|...+ +++|.++|+++|+++|+|++|.......+....+ .....+++.|++|++
T Consensus 170 ~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 249 (397)
T 3fsl_A 170 LQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIF 249 (397)
T ss_dssp CCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT
T ss_pred CCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccc
Confidence 256778777 666 787654 5688999999999999999975322210000000 013468889999987
Q ss_pred --cCCCcceEEeecccccccccCcchhhhHHHH----hhhcccCCCCCCccHHHHHHHHHHHHHh-----cCHhHHHHHH
Q 010058 291 --RGPRGAMIFFRKGVKEINKQGQEVMYAYEDK----INQAVFPGLQGGPHNHTISGLAVALKQV-----KTPEYKAYQE 359 (519)
Q Consensus 291 --~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~----i~~~~~~~~~g~~~~~~iaal~~al~~~-----~~~~~~~~~~ 359 (519)
.|.|.|++++..... ++..+ +....... .++++.....+++.++... .....++.++
T Consensus 250 ~~~G~riG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 317 (397)
T 3fsl_A 250 SLYGERVGGLSVMCEDA-----------EAAGRVLGQLKATVRRN-YSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRT 317 (397)
T ss_dssp TCGGGCCEEEEEECSSH-----------HHHHHHHHHHHHHHHTT-TSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred cCcCCCeeEEEEecCCH-----------HHHHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 478889997632110 22221 11111111 2233333333333333321 0234577888
Q ss_pred HHHHHHHHHHHHHHhc----CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEecc
Q 010058 360 QVLSNSSKFARSLLER----GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGT 435 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~ 435 (519)
++.++++.+.+.|++. |+.+..+. .+.+.|+.+ +...+.+.|+++||.+. |+. ||++
T Consensus 318 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gi~v~----~g~---------Ris~ 378 (397)
T 3fsl_A 318 RILAMRQELVKVLSTEMPERNFDYLLNQ-RGMFSYTGL-----SAAQVDRLREEFGVYLI----ASG---------RMCV 378 (397)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHTTCEECC----TTC---------EEEG
T ss_pred HHHHHHHHHHHHHHhcCCCCCceeecCC-ceEEEecCC-----CHHHHHHHHHhCCEEEC----CCC---------eEEE
Confidence 8999999999999987 56554432 233444433 46678888899999996 331 8887
Q ss_pred CccccCCCCHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
...+ +++++++++.|+++
T Consensus 379 ~~~~-----~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 379 AGLN-----TANVQRVAKAFAAV 396 (397)
T ss_dssp GGCC-----TTTHHHHHHHHHHH
T ss_pred EecC-----HhhHHHHHHHHHhh
Confidence 6444 47799999999875
No 163
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.89 E-value=1.7e-21 Score=198.41 Aligned_cols=318 Identities=12% Similarity=0.123 Sum_probs=201.7
Q ss_pred CeeecCCC---CC--CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPSE---NF--TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~e---n~--~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.+++..+. +. +++.+.+++.+.+.+ + +.+..+ |. .....+++ +++++++|++ + +|.+++|+
T Consensus 30 ~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~-~--~~~~~~-y~-~~~~~~l~----~~la~~~g~~-~----~v~~~~g~ 95 (375)
T 2eh6_A 30 YLDFVSGIGVNSLGHAYPKLTEALKEQVEK-L--LHVSNL-YE-NPWQEELA----HKLVKHFWTE-G----KVFFANSG 95 (375)
T ss_dssp EEESSHHHHTCTTCBSCHHHHHHHHHHHHH-C--SCCCTT-BC-CHHHHHHH----HHHHHTSSSC-E----EEEEESSH
T ss_pred EEEcCCcccccccCCCCHHHHHHHHHHHHh-c--cccCcc-cC-CHHHHHHH----HHHHhhcCCC-C----eEEEeCch
Confidence 46665432 22 689999999998865 2 222222 32 23344444 8888899982 2 57788777
Q ss_pred H-HHHHHHHh---hc---CCC-CEEEEecCCCcccccccccccCCceeeeee-----eeEEEeeeeCCCCCCCCHHHHHH
Q 010058 153 P-ANFQVYTA---LL---KPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSI-----FFETMPYRLDESTGYIDYEQLEK 219 (519)
Q Consensus 153 ~-a~~~~~~a---ll---~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~-----~~~~v~~~~d~~~~~iD~d~l~~ 219 (519)
+ |+..++.+ +. +|| |+|+++++.+.++...........+...|. .+..++ ..|++++++
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~ 167 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAK--------LNDIDSVYK 167 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEEC--------TTCHHHHHT
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCC--------CchHHHHHH
Confidence 7 88777754 45 889 999999987655433221111000000000 011111 158999999
Q ss_pred HhhhhCCcEEEEcc-cc-cccccc----HHHHHHHHhhcCCEEEehhhhh-hhccccCCCCCCCC-CCeEEEEcCCCccc
Q 010058 220 SAALFRPKLIVAGA-SA-YARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKSLR 291 (519)
Q Consensus 220 ~i~~~k~klIi~~~-sn-~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~~~~~~p~~-~~di~~~S~~K~l~ 291 (519)
++++ ++++|++++ +| +|...+ +++|.++|+++|+++|+|++|. .|..........++ ..|++++| |+++
T Consensus 168 ~l~~-~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S--K~~~ 244 (375)
T 2eh6_A 168 LLDE-ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA--KGLG 244 (375)
T ss_dssp TCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGG
T ss_pred HhcC-CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc--cccc
Confidence 8886 899999984 33 577777 9999999999999999999987 32221111000011 37888776 8885
Q ss_pred C-CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Q 010058 292 G-PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAR 370 (519)
Q Consensus 292 G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~ 370 (519)
+ +|.|++++++ ++.+.+.........+++ ....++..++++... ++.++++++++++.+
T Consensus 245 ~g~~~G~~~~~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~-----~~~~~~~~~~~~l~~ 304 (375)
T 2eh6_A 245 GGVPIGAILARE--------------EVAQSFTPGSHGSTFGGN-PLACRAGTVVVDEVE-----KLLPHVREVGNYFKE 304 (375)
T ss_dssp TTSCCEEEEEEH--------------HHHTTCCTTSCCCSSTTC-HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcH--------------HHHhhhcCCCCCCCCCCC-HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
Confidence 4 4569999987 555544332122222333 333333344555432 677888999999999
Q ss_pred HHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 371 SLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 371 ~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
.|++.+...+.+ ...++++++.. +..++.+.|.+.||.+. |+ .++.+|++++..++ ++|+++
T Consensus 305 ~L~~~~~~~~~~--~g~~~~~~~~~---~~~~~~~~l~~~gi~~~----~~-----~~~~iRi~~~~~~~----~~~i~~ 366 (375)
T 2eh6_A 305 KLKELGKGKVKG--RGLMLGLELER---ECKDYVLKALEKGLLIN----CT-----AGKVLRFLPPLIIQ----KEHIDR 366 (375)
T ss_dssp HHHHTTSSEEEE--ETTEEEEECSS---CCHHHHHHHHHTTEECE----EE-----TTTEEEECCCTTCC----HHHHHH
T ss_pred HHHHHhcCCceE--EEEEEEEEEcC---cHHHHHHHHHHCCCEEe----cC-----CCCEEEEECCCCCC----HHHHHH
Confidence 999886533332 24566666642 35677788878999986 32 24689999887777 899999
Q ss_pred HHHHHHHH
Q 010058 451 VAEFFDAA 458 (519)
Q Consensus 451 l~~~l~~~ 458 (519)
+++.|+++
T Consensus 367 ~~~~l~~~ 374 (375)
T 2eh6_A 367 AISVLREI 374 (375)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999875
No 164
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.89 E-value=1.5e-21 Score=200.92 Aligned_cols=325 Identities=14% Similarity=0.167 Sum_probs=199.6
Q ss_pred eeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHH
Q 010058 79 LELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQV 158 (519)
Q Consensus 79 i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~ 158 (519)
..+.++.+++.+.+.+++.. +.+. ..+|...|+ +.+...+++ +++++++|.+. .++++||+.|+..+
T Consensus 30 ~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~r~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~~ 96 (398)
T 1gc0_A 30 PPVYQTATFTFPTVEYGAAC-FAGE-QAGHFYSRI--SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAITST 96 (398)
T ss_dssp CCBCCCSCBCCC-------------------------CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHH
T ss_pred CCccCCCccccCCHHHHHHh-hcCC-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHH
Confidence 34556777777777777652 2222 112322222 334455555 88889999863 59999998899989
Q ss_pred HHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-c
Q 010058 159 YTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-Y 236 (519)
Q Consensus 159 ~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~ 236 (519)
+.++++|||+|+++++.|+++....... ....|..+..++ . .|++++++++++ ++++|+++ ++| +
T Consensus 97 l~~~~~~gd~vl~~~~~~~~~~~~~~~~----~~~~g~~~~~~~--~------~d~~~l~~~i~~-~~~~v~~~~~~npt 163 (398)
T 1gc0_A 97 LWTLLRPGDEVLLGNTLYGCTFAFLHHG----IGEFGVKLRHVD--M------ADLQALEAAMTP-ATRVIYFESPANPN 163 (398)
T ss_dssp HHHHCCTTCEEEEESSCCSHHHHHHHHT----GGGGTCEEEEEC--T------TCHHHHHHHCCT-TEEEEEEESSCTTT
T ss_pred HHHHhcCCCEEEEeCCCchhHHHHHHHH----HHHcCCEEEEEC--C------CCHHHHHHhcCC-CCeEEEEECCCCCC
Confidence 9999999999999998888765433110 011233333332 1 389999999987 89999988 666 7
Q ss_pred cccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcccCCC---cceEEeecccccccccCcc
Q 010058 237 ARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQE 313 (519)
Q Consensus 237 g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~ 313 (519)
|...|+++|+++|+++|+++|+|++|..+.....+ .. ++|+++.|+||+++||. +|+++++++
T Consensus 164 G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~-~~---~~d~~~~S~sK~~~~~~~~~~G~l~~~~~---------- 229 (398)
T 1gc0_A 164 MHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPL-EL---GADLVVHSATKYLSGHGDITAGIVVGSQA---------- 229 (398)
T ss_dssp CCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGG-GG---TCSEEEEETTTTTTCSSSCCCEEEEECHH----------
T ss_pred cccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hh---CceEEEECCccccCCCCCCeEEEEEEChH----------
Confidence 89999999999999999999999999877643222 11 58999999999998765 589988873
Q ss_pred hhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC-CE--------------
Q 010058 314 VMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG-YD-------------- 378 (519)
Q Consensus 314 ~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-------------- 378 (519)
.+.+.+.........++.+....+++..+++ .+....++..++++.+.+.|.+.+ +.
T Consensus 230 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~ 301 (398)
T 1gc0_A 230 ---LVDRIRLQGLKDMTGAVLSPHDAALLMRGIK-----TLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYT 301 (398)
T ss_dssp ---HHHHHHHTHHHHHTCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC---------
T ss_pred ---HHHHHHHHHhhccCCCCCCHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHH
Confidence 2222232221110113344444443333433 245667788889999999998752 22
Q ss_pred EecC--CCCcceeeeeccCCCCcHHHHHHhhcccCeEEccccc---------CC--CC---C-------CCCCCeEEecc
Q 010058 379 LVSG--GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTV---------PG--DV---S-------AMVPGGIRMGT 435 (519)
Q Consensus 379 ~~~~--~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~---------p~--~~---~-------~~~~~~iRi~~ 435 (519)
++.+ .....++.+.+. + +...+.+.|.+.||.+..... |. .. . ...++.||+++
T Consensus 302 ~~~~~~~~~~~~~~~~l~--~-~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~ 378 (398)
T 1gc0_A 302 LARQQMSQPGGMIAFELK--G-GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSV 378 (398)
T ss_dssp -------CCTTEEEEEET--T-HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEEC
T ss_pred HHHhhCCCCceEEEEEEC--C-CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEe
Confidence 1111 012344444443 2 234577778877877653111 10 00 0 01257899999
Q ss_pred CccccCCCCHHHHHHHHHHHHHH
Q 010058 436 PALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 436 ~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
+..++ +++++.+.++|+++
T Consensus 379 g~~~~----~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 379 GLEDI----DDLLADVQQALKAS 397 (398)
T ss_dssp CSSCH----HHHHHHHHHHHHHH
T ss_pred CcCCH----HHHHHHHHHHHHhc
Confidence 98888 89999999888764
No 165
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.89 E-value=3.9e-22 Score=212.81 Aligned_cols=353 Identities=12% Similarity=0.068 Sum_probs=215.3
Q ss_pred eeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH-cC-CCCCCCcceEEeCCcHH-H
Q 010058 79 LELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDA-FQ-LDPAKWGVNVQSLSGSP-A 154 (519)
Q Consensus 79 i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~-~g-~~~~~~~~~V~~~sGs~-a 154 (519)
++|..+++ ..++.+++++.+.+.. . +| +....+..++++.+.+++.+. .+ ...+. ..+|++|+|++ +
T Consensus 106 i~l~~g~~~~~~~~~v~a~~~~~~~-~--~y-----~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-~~~i~~t~G~t~a 176 (533)
T 3f6t_A 106 VNYCHTELGLNRDKVVAEWVNGAVA-N--NY-----PVPDRCLVNTEKIINYFLQELSYKDANLAE-QTDLFPTEGGTAA 176 (533)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHT-C--SC-----CSSSSCCHHHHHHHHHHHHHHHTTTCCCGG-GEEEEEEEHHHHH
T ss_pred eeccCCCCCcCCcHHHHHHHHHHHh-C--CC-----CCCcccHHHHHHHHHHHHHHhcCCCCCCCC-cceEEEECCHHHH
Confidence 45544433 2356666666665543 1 22 223344567887777887666 23 33210 02699999988 8
Q ss_pred HHHHHHh-----hcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC-CCCCCCCHHHHHHHhhhhCCcE
Q 010058 155 NFQVYTA-----LLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD-ESTGYIDYEQLEKSAALFRPKL 228 (519)
Q Consensus 155 ~~~~~~a-----ll~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d-~~~~~iD~d~l~~~i~~~k~kl 228 (519)
+..++.+ +++|||+|+++++.|.++.. .+...|..+..+++..+ .+++.+|++++++++.+ ++++
T Consensus 177 l~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k~ 247 (533)
T 3f6t_A 177 IVYAFHSLAENHLLKKGDKIAINEPIFTPYLR--------IPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-SIKA 247 (533)
T ss_dssp HHHHHHHHHHTTSSCTTCEEEEESSCCHHHHT--------SGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT-TEEE
T ss_pred HHHHHHHhhhhhccCCcCEEEEcCCCcHHHHH--------HHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-CCeE
Confidence 8878887 78999999999988877654 22334555566665432 24678999999999886 8999
Q ss_pred EEEc-ccc-ccccccHH---HHHHHHh-hcCCEEEehhhhhhhccccCCCCCC-CCCCeEEEEcCCCcc--cCCCcceEE
Q 010058 229 IVAG-ASA-YARLYDYA---RIRKVCD-KQKAVMLADMAHISGLVAAGVIPSP-FEYADVVTTTTHKSL--RGPRGAMIF 299 (519)
Q Consensus 229 Ii~~-~sn-~g~~~d~~---~i~~ia~-~~~~~livD~ah~~g~~~~~~~~~p-~~~~di~~~S~~K~l--~GprgG~i~ 299 (519)
|+++ ++| +|...+.+ +|.++|+ ++|+++|+|++|. ++......... ..+.++++.|+||.+ .|+|.|+++
T Consensus 248 v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~ 326 (533)
T 3f6t_A 248 LIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYG-AFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIA 326 (533)
T ss_dssp EEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTG-GGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEE
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcc-ccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEE
Confidence 9887 777 88777765 7777888 6899999999976 32221100000 013569999999986 588889999
Q ss_pred eeccccccc-ccCc------c------------hhhh----HHHHhhhcccCCCCCCccHHHHHHHH----HHHH-----
Q 010058 300 FRKGVKEIN-KQGQ------E------------VMYA----YEDKINQAVFPGLQGGPHNHTISGLA----VALK----- 347 (519)
Q Consensus 300 ~~~~~~~~~-~~g~------~------------~~~~----~~~~i~~~~~~~~~g~~~~~~iaal~----~al~----- 347 (519)
++++....+ ..+. . .... +...+... .....++++.....+++ .++.
T Consensus 327 ~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~-~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~ 405 (533)
T 3f6t_A 327 LNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSI-GLYHTAGLSTPQQIMEALFSMTHLLTSTNG 405 (533)
T ss_dssp EESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTT-TTGGGCSCCHHHHHHHHHHHHHHHTTCBGG
T ss_pred ECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHH-HHhcccCCChHHHHHHHHHHHHHHhhhccc
Confidence 988511000 0000 0 0000 00111111 11112334444443322 2232
Q ss_pred HhcCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC-----C----------CcHHH-HHHhhcccC
Q 010058 348 QVKTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK-----G----------IDGSR-VEKVLESVH 411 (519)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~-----~----------~~~~~-~~~~L~~~g 411 (519)
.......++.++.++++++.|.+.|. .++.+..+ ....+.++++... + .+..+ +.++|++.|
T Consensus 406 ~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~-~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~G 483 (533)
T 3f6t_A 406 GSDDPYIDIARKLVSERYDQLHDAMQ-APKDETDT-NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNG 483 (533)
T ss_dssp GTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTT-BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcC-CCccccCC-CceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCC
Confidence 11234567888889999999999997 77654433 3345566665420 1 23333 455667899
Q ss_pred eEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 412 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 412 I~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
|.+. ||.......+++||++...+ +++++++++.|.++++..
T Consensus 484 V~v~----pg~~f~~~~~~iRls~a~~~-----~e~i~~~i~~L~~~l~~~ 525 (533)
T 3f6t_A 484 VVLV----DGVGFGAKPGELRVSQANLP-----TEDYALIGKQVLELLKEY 525 (533)
T ss_dssp SSSC----TTEEECSSTTEEEEESSSSC-----HHHHHHHHHHHHHHHHHH
T ss_pred EEEe----CCcccCCCCCEEEEEEeeCC-----HHHHHHHHHHHHHHHHHH
Confidence 9986 55431113578999986433 689999999999998754
No 166
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.89 E-value=7.5e-22 Score=207.31 Aligned_cols=329 Identities=14% Similarity=0.159 Sum_probs=202.4
Q ss_pred HHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcC----
Q 010058 90 VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLK---- 164 (519)
Q Consensus 90 ~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~---- 164 (519)
+.|.+++.+.+.. +. ..|+......+++ +++++++|.+ +|++++|++ |+..++.++++
T Consensus 55 ~~v~~a~~~~~~~----~~---~~y~~~~~~~~l~----~~la~~~~~~------~v~~t~ggt~A~~~al~~~~~~~~~ 117 (467)
T 1ax4_A 55 NAMSDHQWAAMIT----GD---EAYAGSRNYYDLK----DKAKELFNYD------YIIPAHQGRGAENILFPVLLKYKQK 117 (467)
T ss_dssp CCEEHHHHHHHHT----CC---CCSSSCHHHHHHH----HHHHHHHCCC------EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh----cc---cccccCccHHHHH----HHHHHHcCCC------cEEEcCCcHHHHHHHHHHHHHhhcc
Confidence 6777777666544 11 2344456666666 7778888864 366666554 99989999988
Q ss_pred CCCE---EEEecCCC-cccccccccccCCceeeeeeeeEEEeee--eCC-----CCCCCCHHHHHHHhhhh---CCcEEE
Q 010058 165 PHER---IMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYR--LDE-----STGYIDYEQLEKSAALF---RPKLIV 230 (519)
Q Consensus 165 pGD~---Vl~~~~~~-~~~~~~~~~~~~~~v~~~g~~~~~v~~~--~d~-----~~~~iD~d~l~~~i~~~---k~klIi 230 (519)
|||+ |++. ..| +.... .+...|..+..++.. ++. .++.+|+++|++++++. ++++|+
T Consensus 118 ~Gd~~~~viv~-~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi 188 (467)
T 1ax4_A 118 EGKAKNPVFIS-NFHFDTTAA--------HVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIV 188 (467)
T ss_dssp TTCCSSCEEEE-SSCCHHHHH--------HHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEE
T ss_pred CCCccceEEEe-ccccchhhH--------HHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEE
Confidence 9998 8887 333 22111 111223322222221 111 14578999999999853 688998
Q ss_pred Ec-ccc-c-cccc---cHHHHHHHHhhcCCEEEehhhhhh-hcc--------ccCCCCCCC-----CCCeEEEEcCCCcc
Q 010058 231 AG-ASA-Y-ARLY---DYARIRKVCDKQKAVMLADMAHIS-GLV--------AAGVIPSPF-----EYADVVTTTTHKSL 290 (519)
Q Consensus 231 ~~-~sn-~-g~~~---d~~~i~~ia~~~~~~livD~ah~~-g~~--------~~~~~~~p~-----~~~di~~~S~~K~l 290 (519)
++ ++| + |... ++++|+++|++||++||+|++|.. |.. ..+.....+ ..+|++++|+||++
T Consensus 189 ~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~ 268 (467)
T 1ax4_A 189 STVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDP 268 (467)
T ss_dssp EESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTT
T ss_pred EeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccC
Confidence 88 555 5 5544 468999999999999999998765 322 112110000 14789999999998
Q ss_pred cCCCcceEEee-c-ccccccccCcchhhhHHHHhhhcccCC--CCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHH
Q 010058 291 RGPRGAMIFFR-K-GVKEINKQGQEVMYAYEDKINQAVFPG--LQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSS 366 (519)
Q Consensus 291 ~GprgG~i~~~-~-~~~~~~~~g~~~~~~~~~~i~~~~~~~--~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~ 366 (519)
+.|.||+++++ + ++. +....+.... .+ ..++.+...+++++.+++.... ++..++..++++
T Consensus 269 g~~~Gg~~~~~d~~~l~-----------~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~ 333 (467)
T 1ax4_A 269 LLNIGGLVAIRDNEEIF-----------TLARQRCVPM-EGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVK 333 (467)
T ss_dssp CCSSCEEEEESSCHHHH-----------HHHHHHHHHH-TCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHH
T ss_pred CCCcceEEEeCCHHHHH-----------HHHHhhcccc-ccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHH
Confidence 66657888887 3 321 1111111111 11 1244455555556656765443 223444557788
Q ss_pred HHHHHHHhcCCEEecCCCCcceeeee-------ccCCCCcHHHHHHhh-cccCeEEcc-ccc-CCCC------CCCCCCe
Q 010058 367 KFARSLLERGYDLVSGGTENHLVLVN-------LRNKGIDGSRVEKVL-ESVHIAANK-NTV-PGDV------SAMVPGG 430 (519)
Q Consensus 367 ~l~~~L~~~g~~~~~~~~~~~~~~v~-------~~~~~~~~~~~~~~L-~~~gI~v~~-~~~-p~~~------~~~~~~~ 430 (519)
++.+.|.+.|++++.+ ...++++++ +...+.+..++.+.| .++||.++. ... .+.. .+...+.
T Consensus 334 ~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~ 412 (467)
T 1ax4_A 334 YLGDRLREAGIPIQYP-TGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEF 412 (467)
T ss_dssp HHHHHHHHTTCCBCSS-CCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCE
T ss_pred HHHHHHHhCCCCcccC-CCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccce
Confidence 9999998878876543 334566666 322234567788877 889999974 211 0110 1112478
Q ss_pred EEeccCcc-ccCCCCHHHHHHHHHHHHHHHHHHhh
Q 010058 431 IRMGTPAL-TSRGFVEEDFEKVAEFFDAAVKLALK 464 (519)
Q Consensus 431 iRi~~~~~-ttrg~~~~di~~l~~~l~~~l~~~~~ 464 (519)
|||+++.. ++ ++|++++++.|.++++....
T Consensus 413 iRls~~~~~~t----~e~i~~~~~~l~~~~~~~~~ 443 (467)
T 1ax4_A 413 MRLTIARRVYT----NDHMDYIADALIGLKEKFAT 443 (467)
T ss_dssp EEEECCTTSSC----HHHHHHHHHHHHTTHHHHTT
T ss_pred EEEecccccCC----HHHHHHHHHHHHHHHHhhhc
Confidence 99998843 55 89999999999999876543
No 167
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.89 E-value=2.2e-22 Score=207.08 Aligned_cols=284 Identities=15% Similarity=0.142 Sum_probs=185.4
Q ss_pred HHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeee
Q 010058 126 LCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 205 (519)
Q Consensus 126 ~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~ 205 (519)
.+++++++++|.+. .+.+++|+.|+..++.++++|||+|+++++.|+++....... ....|..+..++ .
T Consensus 68 ~l~~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~~~~v~--~ 136 (398)
T 2rfv_A 68 ALEKKLAVLERGEA-----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHS----MPKFGINVRFVD--A 136 (398)
T ss_dssp HHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTH----HHHTTCEEEEEC--T
T ss_pred HHHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHH----HHHcCCEEEEeC--C
Confidence 34488889999862 588999998988899999999999999998887765432100 012244444433 2
Q ss_pred CCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CCeEE
Q 010058 206 DESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YADVV 282 (519)
Q Consensus 206 d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~di~ 282 (519)
.|++++++.+++ ++++|+++ ++| +|...|+++|+++|+++|+++|+|++|..+.... ++. ++|++
T Consensus 137 ------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~-----~~~~~~di~ 204 (398)
T 2rfv_A 137 ------AKPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQ-----PLQLGADIV 204 (398)
T ss_dssp ------TSHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-----GGGGTCSEE
T ss_pred ------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-----chhhCCcEE
Confidence 189999999987 89999988 666 7899999999999999999999999988765422 111 58999
Q ss_pred EEcCCCcccCCC---cceEEeecccccccccCcchhhhHHH-HhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHH
Q 010058 283 TTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYED-KINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQ 358 (519)
Q Consensus 283 ~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~-~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~ 358 (519)
+.|+||+++||. +|++++++ ++.+ .+.........++.+....+++..+++. +....
T Consensus 205 ~~s~sK~~~~~g~~~~G~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~ 265 (398)
T 2rfv_A 205 VHSVTKYINGHGDVIGGIIVGKQ--------------EFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRM 265 (398)
T ss_dssp EEETTTTTTCSSCCCCEEEEECH--------------HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred EEeCcccccCCCCceEEEEEECH--------------HHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHH
Confidence 999999987654 39999987 3333 3332211110234455444444455532 34455
Q ss_pred HHHHHHHHHHHHHHHhcC-C--------------EEecC--CCCcceeeeeccCCCCcHHHHHHhhcc---cCeEEcccc
Q 010058 359 EQVLSNSSKFARSLLERG-Y--------------DLVSG--GTENHLVLVNLRNKGIDGSRVEKVLES---VHIAANKNT 418 (519)
Q Consensus 359 ~~~~~~~~~l~~~L~~~g-~--------------~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~L~~---~gI~v~~~~ 418 (519)
++..++++.+.+.|++.+ + .+..+ .....++++.+.. .......++++ .||.++...
T Consensus 266 ~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~l~~~~~~~~i~~~~G~ 342 (398)
T 2rfv_A 266 ERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG---GLEAGRRMINSVELCLLAVSLGD 342 (398)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT---HHHHHHHHHTTCSSSEECSCCSS
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC---CHHHHHHHHHhCCcceeccCCCC
Confidence 667788888888888753 1 11111 0124455666542 12234444443 477765321
Q ss_pred c------CC--C-C--C-------CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 419 V------PG--D-V--S-------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 419 ~------p~--~-~--~-------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
. |. . . + ...++.|||+++..++ +++++++.++|+++
T Consensus 343 ~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~----~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 343 TETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDP----EDIINDLEHAIRKA 396 (398)
T ss_dssp SSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCH----HHHHHHHHHHHHHH
T ss_pred cceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCH----HHHHHHHHHHHHhh
Confidence 1 00 0 0 0 0125789999998888 89999999888753
No 168
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.89 E-value=1.9e-22 Score=207.56 Aligned_cols=310 Identities=15% Similarity=0.146 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCC
Q 010058 63 EIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKW 142 (519)
Q Consensus 63 ~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~ 142 (519)
++++.++++.+++...++.++..| ...|++++..........+......|+. ...+.+| +.+++++|.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~n--~~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le----~~lA~l~g~e~--- 76 (409)
T 3jzl_A 7 AIRKKVETQIDDLQNKTDEIAEFN--QAKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLE----RVYATVFKTEA--- 76 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHH----HHHHHHHTCSE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHH----HHHHHHhCCCc---
Confidence 455556666666666667677766 4678888887542211001111112222 3345555 78899999976
Q ss_pred cceEE--eCCcHHHHHHHHHhhcCCCCEEEEec-CCCccccccccccc--CCceeeeeeeeEEEeeeeCCCCCCCCHHHH
Q 010058 143 GVNVQ--SLSGSPANFQVYTALLKPHERIMALD-LPHGGHLSHGYQTD--TKKISAVSIFFETMPYRLDESTGYIDYEQL 217 (519)
Q Consensus 143 ~~~V~--~~sGs~a~~~~~~all~pGD~Vl~~~-~~~~~~~~~~~~~~--~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l 217 (519)
+.++ ++||+.|+..++.++++|||+|++.+ ..|++......... .......|..+..++ .+ +++.+|++++
T Consensus 77 -alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~--~~-~~g~~d~e~l 152 (409)
T 3jzl_A 77 -ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVP--LL-ENGDVDFPRI 152 (409)
T ss_dssp -EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECC--CC-TTSCCCHHHH
T ss_pred -EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeC--CC-CCCCcCHHHH
Confidence 3233 67888899989999999999999987 66665542110000 001112344444443 44 3578999999
Q ss_pred HHHhhhhCCcEEEEcc----c-c-ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCCCC-CCeEEEEcCCC
Q 010058 218 EKSAALFRPKLIVAGA----S-A-YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHK 288 (519)
Q Consensus 218 ~~~i~~~k~klIi~~~----s-n-~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~S~~K 288 (519)
++++++ +||+|+++. + | +|...|+++|.++|++ +|+++++|++|..+.... .|.. ++|++++|+||
T Consensus 153 ~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~----~p~~~g~Div~~S~sK 227 (409)
T 3jzl_A 153 AKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQ----EPPEVGADIIAGSLIK 227 (409)
T ss_dssp HHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSC----CSGGGTCSEEEEETTS
T ss_pred HHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccC----CccccCCeEEEECccc
Confidence 999987 899999875 3 4 6788999999999999 999999999987654221 1222 68999999999
Q ss_pred cccC---CCcceEEeecccccccccCcchhhhHHHHhhhc-ccCCC--CCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH
Q 010058 289 SLRG---PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-VFPGL--QGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362 (519)
Q Consensus 289 ~l~G---prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~~~--~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~ 362 (519)
+++| +.||++++++ ++.+++... ..++. ..++......++..+++ ....+.++..
T Consensus 228 ~lgg~~~~~GG~v~~~~--------------~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~~~ 288 (409)
T 3jzl_A 228 NPGGGLAKTGGYIAGKE--------------ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQAI 288 (409)
T ss_dssp GGGTTTCSSCEEEEECH--------------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHH
T ss_pred cCCccCCceEEEEEeCH--------------HHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHHHH
Confidence 9976 5579999987 555555432 22222 11222211122222332 2456788899
Q ss_pred HHHHHHHHHHHhcCCEEecCCCC-cc--eeeeeccCCCCcHHHHHHhhcccC
Q 010058 363 SNSSKFARSLLERGYDLVSGGTE-NH--LVLVNLRNKGIDGSRVEKVLESVH 411 (519)
Q Consensus 363 ~~~~~l~~~L~~~g~~~~~~~~~-~~--~~~v~~~~~~~~~~~~~~~L~~~g 411 (519)
+++.++++.|+++|+++.+..+. .| +..+.+.. ......+.+.|.+..
T Consensus 289 ~~a~~la~~L~~~g~~v~p~~~~~~~~~i~~i~l~~-~~~~~~~~~~L~~~~ 339 (409)
T 3jzl_A 289 KGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHN-KEKMVAFAQAIQAAS 339 (409)
T ss_dssp HHHHHHHHHHHHTTCEEESCTTSCCSSSCCEEECSC-HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCCcccCCCCCCCccEEEEEEeCC-HHHHHHHHHHHHhcC
Confidence 99999999999999988543221 12 33333321 112334556666554
No 169
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.89 E-value=3.6e-22 Score=200.00 Aligned_cols=283 Identities=12% Similarity=0.123 Sum_probs=186.8
Q ss_pred HHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCC
Q 010058 128 QKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE 207 (519)
Q Consensus 128 ~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~ 207 (519)
++.+++++|.+. .|.++||+.|+..++.++++|||+|+++++.|.++....... ....|..+..++.
T Consensus 4 ~~~la~~~g~~~-----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~---- 70 (331)
T 1pff_A 4 EGKIAKLEHAEA-----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQ----LRKFGVEVDFIDM---- 70 (331)
T ss_dssp HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTH----HHHTTCEEEEECT----
T ss_pred HHHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHH----HHhcCCEEEEeCC----
Confidence 478889999862 599999977988899999999999999998887764432110 0112333333321
Q ss_pred CCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhh-cCCEEEehhhhhhhccccCCCCCCCCCCeEEEE
Q 010058 208 STGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDK-QKAVMLADMAHISGLVAAGVIPSPFEYADVVTT 284 (519)
Q Consensus 208 ~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~-~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~ 284 (519)
.|++++++.+++ ++++|+++ ++| +|...|+++|.++|++ +|+++|+|++|..|...... .. ++|++++
T Consensus 71 ----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~d~~~~ 141 (331)
T 1pff_A 71 ----AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DL---GVDIVVH 141 (331)
T ss_dssp ----TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GG---TCSEEEE
T ss_pred ----CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hc---CCcEEEE
Confidence 478899998886 89999988 666 8999999999999999 99999999999877653222 11 5899999
Q ss_pred cCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHH
Q 010058 285 TTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQV 361 (519)
Q Consensus 285 S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~ 361 (519)
|+||++++|. +|+++++++ ++.+.+......+..++++.....++..+++. .....++.
T Consensus 142 s~~K~~~~~~~r~~G~~~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 203 (331)
T 1pff_A 142 SATKYINGHTDVVAGLVCSRAD-------------IIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRA 203 (331)
T ss_dssp ETTTTTSSSSSCCCEEEEECHH-------------HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred ECccccCCCCCceEEEEEeCcH-------------HHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHH
Confidence 9999987664 689998872 34444444333201233444333333334432 33344556
Q ss_pred HHHHHHHHHHHHhc-C--------------CEEecC--CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCC---
Q 010058 362 LSNSSKFARSLLER-G--------------YDLVSG--GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPG--- 421 (519)
Q Consensus 362 ~~~~~~l~~~L~~~-g--------------~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~--- 421 (519)
.++.+.+.+.|++. . +.+..+ .....++.+.+. +..++.+.|.+.||.++..+..+
T Consensus 204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gI~~~~~s~g~~~s 279 (331)
T 1pff_A 204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD----GLEKAKKVLDNCHVVSLAVSLGGPES 279 (331)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHHHHHTCSSSEECSSCCSSSC
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----CHHHHHHHHHhCCCceeccCCCCcce
Confidence 66777777777654 1 111110 001233344332 46778889999999775321111
Q ss_pred ---------C---------CCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 422 ---------D---------VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 422 ---------~---------~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
. .....++.+|++++..++ ++|++.+.++|+++
T Consensus 280 l~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t----~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 280 LIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENV----QDIIDDLKQALDLV 330 (331)
T ss_dssp EEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCH----HHHHHHHHHHHHTC
T ss_pred eeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCH----HHHHHHHHHHHHHh
Confidence 0 000125789999998888 99999999988754
No 170
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.89 E-value=2.4e-21 Score=199.41 Aligned_cols=346 Identities=16% Similarity=0.141 Sum_probs=218.3
Q ss_pred hhhhcCHH-HHHHHHHHHHh-cccCeeecCCC-------CCCcHHHHHHHhhHh-hhccCCCCCCCCCCCCchhHHHHHH
Q 010058 56 PLEEIDPE-IADIIELEKAR-QWKGLELIPSE-------NFTSVSVMQAVGSVM-TNKYSEGYPGARYYGGNEYIDMAES 125 (519)
Q Consensus 56 ~l~~~~~~-~~~~~~~e~~~-~~~~i~L~a~e-------n~~~~~V~ea~~~~l-~~~~~~g~p~~~~y~~~~~~~~le~ 125 (519)
.++.+.|. ++.+.....+. ..+.|+|..++ .++++.|.+|+. .+ .+.. ...|+...+..++++
T Consensus 7 ~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~------~~~Y~~~~G~~~lr~ 79 (405)
T 3k7y_A 7 SLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYK------EKPYLLGNGTEDFST 79 (405)
T ss_dssp GCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCC------CCCCCTTSSCHHHHH
T ss_pred cCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCC------CCCCCCCCCcHHHHH
Confidence 34555554 55655554332 24568998774 135788999877 43 2211 123444566778888
Q ss_pred HHHHHHHHHcCCC--CCCCcceEEeCCcHH-HHHHHHHhhcC--CCCEEEEecCCCcccccccccccCCceeeeeeeeEE
Q 010058 126 LCQKRALDAFQLD--PAKWGVNVQSLSGSP-ANFQVYTALLK--PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFET 200 (519)
Q Consensus 126 ~~~~~~~~~~g~~--~~~~~~~V~~~sGs~-a~~~~~~all~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 200 (519)
++.+++.+..+.. ++. +++.+|+|++ |+..++.++++ | |+|+++++.+.++.. .+...|..+..
T Consensus 80 aia~~~~~~~~~~~~~~~--i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~--------~~~~~g~~~~~ 148 (405)
T 3k7y_A 80 LTQNLIFGNNSKYIEDKK--ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVN--------MIESRGFNLKY 148 (405)
T ss_dssp HHHHHHHCSSCTTTTTTC--EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHH--------HHHTTTCEEEE
T ss_pred HHHHHHcCCCCccccccc--eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHH--------HHHHcCCeEEE
Confidence 8888876655532 222 3468888888 88878888877 9 999999977766643 33445666666
Q ss_pred EeeeeCCCCCCCCHHHHHHHhhhh-CCcEEEEc-c-cc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccccCCCC
Q 010058 201 MPYRLDESTGYIDYEQLEKSAALF-RPKLIVAG-A-SA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVAAGVIP 273 (519)
Q Consensus 201 v~~~~d~~~~~iD~d~l~~~i~~~-k~klIi~~-~-sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~ 273 (519)
+++. +++++.+|++++++.+++. ++++|+++ + +| +|..++ +++|.++|++||+++|+|+++. ++...+...
T Consensus 149 v~~~-~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~-~l~~~~~~~ 226 (405)
T 3k7y_A 149 INFF-DYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQ-GFGHTNLEE 226 (405)
T ss_dssp ECCE-ETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCT-TTSSSSTTG
T ss_pred Eecc-ccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcc-cccCCCccc
Confidence 6652 3346889999999998752 46788887 4 46 787666 5677788999999999999854 333221100
Q ss_pred --C------CCCCCeEEEEcCCCcc--cCCCcceEEee--cccccccccCcchhhhHHHHh----hhcccCCCCCCccHH
Q 010058 274 --S------PFEYADVVTTTTHKSL--RGPRGAMIFFR--KGVKEINKQGQEVMYAYEDKI----NQAVFPGLQGGPHNH 337 (519)
Q Consensus 274 --~------p~~~~di~~~S~~K~l--~GprgG~i~~~--~~~~~~~~~g~~~~~~~~~~i----~~~~~~~~~g~~~~~ 337 (519)
. ....--+++.|++|++ +|+|.||+++. +. ++.+.+ ...... ...+++..
T Consensus 227 ~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~-------------~~~~~~~~~l~~~~~~-~~~~~~~~ 292 (405)
T 3k7y_A 227 DVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQ-------------EEKKIVFNNLCFIVRK-FYSSPVIH 292 (405)
T ss_dssp GGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSH-------------HHHHHHHHHHHHHHHT-TTSSCCHH
T ss_pred chHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCH-------------HHHHHHHHHHHHHHhc-ccCCCcHH
Confidence 0 0012357788999986 69999998652 21 222222 211111 12334444
Q ss_pred HHHHHHHHHHHh--c---CHhHHHHHHHHHHHHHHHHHHHH----hcC----CEEecCCCCcceeeeeccCCCCcHHHHH
Q 010058 338 TISGLAVALKQV--K---TPEYKAYQEQVLSNSSKFARSLL----ERG----YDLVSGGTENHLVLVNLRNKGIDGSRVE 404 (519)
Q Consensus 338 ~iaal~~al~~~--~---~~~~~~~~~~~~~~~~~l~~~L~----~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 404 (519)
...+++.++..- . ....+.+++++.++++.+.+.|+ +.| +.+..+ ..+.+.|+.+. ...+
T Consensus 293 ~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p-~gg~f~~~~l~-----~~~~- 365 (405)
T 3k7y_A 293 TNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKK-QRGLFSFVPLL-----AKIA- 365 (405)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSS-CCSSEEECGGG-----GGGT-
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccC-CceEEEecCCC-----HHHH-
Confidence 444444444421 0 12345667789999999999999 776 354433 33455565543 2333
Q ss_pred HhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 405 KVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 405 ~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+.|+++||.+. |+ + ||++...+ +++++++++.|+++++
T Consensus 366 ~~L~~~gV~v~----p~--------~-Ris~a~~~-----~~~i~~~~~~i~~~~~ 403 (405)
T 3k7y_A 366 EHLKTHHIYII----NN--------G-RINVSGIT-----KNNVDYIADKICLSLS 403 (405)
T ss_dssp TTTTTTTEECC----TT--------S-EEEGGGCC-----TTHHHHHHHHHHHHHH
T ss_pred HHHHHCCEeec----CC--------C-eEEEeccC-----HHHHHHHHHHHHHHHh
Confidence 44588999985 42 2 99876554 4899999999999886
No 171
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.89 E-value=5.6e-22 Score=204.84 Aligned_cols=329 Identities=14% Similarity=0.103 Sum_probs=209.7
Q ss_pred ccCeeecCCCC-------CCcHHHHHHHhh-HhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcce
Q 010058 76 WKGLELIPSEN-------FTSVSVMQAVGS-VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVN 145 (519)
Q Consensus 76 ~~~i~L~a~en-------~~~~~V~ea~~~-~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~ 145 (519)
.+.|+|..+.. ++++.|.+++.+ .+......+ |+...+..++++.+.+++...+|. +++ +
T Consensus 29 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~~~~----~ 98 (412)
T 1yaa_A 29 ATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHE------YLGITGLPSLTSNAAKIIFGTQSDALQED----R 98 (412)
T ss_dssp SSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCC------CCCTTCCHHHHHHHHHHHHCTTCHHHHTT----C
T ss_pred CCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccC------CCCCCCcHHHHHHHHHHHhcCCCCCCCcc----e
Confidence 45688876652 567999999998 775311112 333344567776666666555553 343 4
Q ss_pred EEe--CCcHH-HHHHH--HHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHH
Q 010058 146 VQS--LSGSP-ANFQV--YTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKS 220 (519)
Q Consensus 146 V~~--~sGs~-a~~~~--~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~ 220 (519)
|.+ ++|++ ++..+ +..+++|||+|+++++.|.++... +...|..+..++.. +++++.+|+++++++
T Consensus 99 i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~--------~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~ 169 (412)
T 1yaa_A 99 VISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAI--------FENQGLKTATYPYW-ANETKSLDLNGFLNA 169 (412)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHH--------HHTTTCCEEEEECE-ETTTTEECHHHHHHH
T ss_pred EEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHH--------HHHcCceEEEEeee-cCCCCccCHHHHHHH
Confidence 887 88877 77755 345568999999999887776432 22234444455431 334678999999999
Q ss_pred hhhhC--CcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccc--------c-CCCCCCCCC---CeE
Q 010058 221 AALFR--PKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVA--------A-GVIPSPFEY---ADV 281 (519)
Q Consensus 221 i~~~k--~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~--------~-~~~~~p~~~---~di 281 (519)
+++.+ +.+++++ ++| +|...+ +++|.++|+++|+++|+|++|...... . .+... .. .++
T Consensus 170 l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i 247 (412)
T 1yaa_A 170 IQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEK--LSTVSPVF 247 (412)
T ss_dssp HHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHH--TTTTCCEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhc--CCCCcceE
Confidence 97632 3444435 666 787765 667889999999999999997421110 0 10000 01 468
Q ss_pred EEEcCCCccc--CCCcceEE--e-----ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc--
Q 010058 282 VTTTTHKSLR--GPRGAMIF--F-----RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK-- 350 (519)
Q Consensus 282 ~~~S~~K~l~--GprgG~i~--~-----~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~-- 350 (519)
++.|+||+++ |.|.|+++ + +++.. ..+.+.+...... ..++++....+++..+++...
T Consensus 248 ~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~----------~~l~~~l~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 316 (412)
T 1yaa_A 248 VCQSFAKNAGMYGERVGCFHLALTKQAQNKTIK----------PAVTSQLAKIIRS-EVSNPPAYGAKIVAKLLETPELT 316 (412)
T ss_dssp EEEECTTTSCCGGGCEEEEEEECCSCTTHHHHH----------HHHHHHHHHHHHT-TTSSCCHHHHHHHHHHHHSHHHH
T ss_pred EEeccCCCCCCcCCcceEEEEEecCCCCCHHHH----------HHHHHHHHHHHhh-ccCCCChHHHHHHHHHhCCHHHH
Confidence 8899999874 56679998 6 33100 0144444432112 123445555555566665431
Q ss_pred ---CHhHHHHHHHHHHHHHHHHHHHHhcC----CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC
Q 010058 351 ---TPEYKAYQEQVLSNSSKFARSLLERG----YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV 423 (519)
Q Consensus 351 ---~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~ 423 (519)
...+++..+++.++++++.+.|++.+ +.+..+. .+.+.|+. ++...+...|+++||.+. |
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~l~~~gi~v~----~--- 383 (412)
T 1yaa_A 317 EQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQ-CGMFSFTG-----LTPQMVKRLEETHAVYLV----A--- 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHC-CSSEEECC-----CCHHHHHHHHHHHCEECC----T---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccC-ceEEEeeC-----CCHHHHHHHHHhCCEEec----c---
Confidence 12467888899999999999999876 6655432 23333432 345667777778999985 2
Q ss_pred CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 424 SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 424 ~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++||++... + ++|++++++.|+++++
T Consensus 384 ------~~Ris~~~~-~----~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 384 ------SGRASIAGL-N----QGNVEYVAKAIDEVVR 409 (412)
T ss_dssp ------TSEEEGGGC-C----TTTHHHHHHHHHHHHH
T ss_pred ------CcEEEEccC-C----HhHHHHHHHHHHHHHH
Confidence 489998743 4 7999999999998875
No 172
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.88 E-value=1.1e-21 Score=212.77 Aligned_cols=293 Identities=18% Similarity=0.114 Sum_probs=203.5
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeee
Q 010058 127 CQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRL 205 (519)
Q Consensus 127 ~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~ 205 (519)
++++++++||++. .+.+++|++ ||.++++++++|||+|++..+.|.++.. .+.+.|..+..++...
T Consensus 200 aE~~lA~~fGa~~-----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~--------~l~lsGa~pv~v~~~~ 266 (715)
T 3n75_A 200 AEQYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH--------LMMMSDVTPIYFRPTR 266 (715)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHSCCEEEEECCCB
T ss_pred HHHHHHHHhCCCC-----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEeccc
Confidence 3489999999986 488899976 9999999999999999999988877764 3445566655554332
Q ss_pred CCCCCC----C-----CHHHHHHHhhhh-CCc---EEEEcccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCC
Q 010058 206 DESTGY----I-----DYEQLEKSAALF-RPK---LIVAGASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGV 271 (519)
Q Consensus 206 d~~~~~----i-----D~d~l~~~i~~~-k~k---lIi~~~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~ 271 (519)
+ ++. + |+++|+++++++ ++| +|+++.+| +|...|+++|.++|++++ +++|+||..+....+.
T Consensus 267 ~--~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~ 342 (715)
T 3n75_A 267 N--AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (715)
T ss_dssp C--TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGG
T ss_pred c--ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCc
Confidence 2 232 3 899999999863 233 67776335 899999999999998764 7999999877633322
Q ss_pred CC--CCCC---CCeEE---EEcCCCcccCCC-cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHH
Q 010058 272 IP--SPFE---YADVV---TTTTHKSLRGPR-GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGL 342 (519)
Q Consensus 272 ~~--~p~~---~~di~---~~S~~K~l~Gpr-gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal 342 (519)
.+ +++. .+|++ ++|+||+|+|+. +|+|++++++ ...+++........++|+...++++
T Consensus 343 ~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i-------------~~~~~~~~~~~~~STSpsy~~~Asl 409 (715)
T 3n75_A 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV-------------NEETFNEAYMMHTTTSPHYGIVAST 409 (715)
T ss_dssp GTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCC-------------CHHHHHHHHHHTSCSSCCHHHHHHH
T ss_pred cccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchh-------------hHHHHHHHHHhhcCCCchHHHHHHH
Confidence 21 2232 25765 899999999984 5899988742 1223333333333478999999999
Q ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-C------CEEecCCC----------------------------Ccc
Q 010058 343 AVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-G------YDLVSGGT----------------------------ENH 387 (519)
Q Consensus 343 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~~----------------------------~~~ 387 (519)
.+|++++....-+++.++..++++++++.|+++ + +.++.+.. |..
T Consensus 410 daA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~ 489 (715)
T 3n75_A 410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPI 489 (715)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTT
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCe
Confidence 999988764344667899999999999999876 2 44443210 001
Q ss_pred eeeeeccC---------CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 388 LVLVNLRN---------KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 388 ~~~v~~~~---------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
-+++.... .|+++.++.+.|+++||.+.+.. ...|= .+.|.|.+++++++++++|.++
T Consensus 490 Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d---------~~~vl----~l~s~g~~~~~~~~L~~aL~~~ 556 (715)
T 3n75_A 490 KVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLL----FLFSIGIDKTKALSLLRALTDF 556 (715)
T ss_dssp EEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEE---------TTEEE----EECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecC---------CCcEE----EEeCCCCCHHHHHHHHHHHHHH
Confidence 12233222 15778899999998999986421 12232 2344455589999999999887
Q ss_pred HHHH
Q 010058 459 VKLA 462 (519)
Q Consensus 459 l~~~ 462 (519)
-+..
T Consensus 557 ~~~~ 560 (715)
T 3n75_A 557 KRAF 560 (715)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
No 173
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.88 E-value=9.3e-22 Score=203.10 Aligned_cols=351 Identities=12% Similarity=0.052 Sum_probs=215.2
Q ss_pred hhhcCHHHHHHHHHHHHh--cccCeeecCCCC-------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHH
Q 010058 57 LEEIDPEIADIIELEKAR--QWKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLC 127 (519)
Q Consensus 57 l~~~~~~~~~~~~~e~~~--~~~~i~L~a~en-------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~ 127 (519)
+..+.+.....+...... ..+.|+|..+.. ++++.|.+++.+.+.+. + ....|+...+..++++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~---~--~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 9 VPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNS---S--LNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp CCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCT---T--CCCCCCCTTCCHHHHHHH
T ss_pred CcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhCh---h--hccCCCCCCCCHHHHHHH
Confidence 444444444333333322 245688877762 45689999998876321 0 011233334456677555
Q ss_pred HHHHHHHcCC--CCCCCcceEEe--CCcHH-HHHHHH--HhhcCCC-----CEEEEecCCCcccccccccccCCceeeee
Q 010058 128 QKRALDAFQL--DPAKWGVNVQS--LSGSP-ANFQVY--TALLKPH-----ERIMALDLPHGGHLSHGYQTDTKKISAVS 195 (519)
Q Consensus 128 ~~~~~~~~g~--~~~~~~~~V~~--~sGs~-a~~~~~--~all~pG-----D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g 195 (519)
.+++...+|. +++ +|.+ ++|++ |+..++ .++++|| |+|+++++.|.++... +...|
T Consensus 84 a~~~~~~~~~~~~~~----~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~--------~~~~g 151 (412)
T 1ajs_A 84 SRLALGDDSPALQEK----RVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGV--------FTTAG 151 (412)
T ss_dssp HHHHHCTTCHHHHTT----CEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHH--------HHHTT
T ss_pred HHHHhcCCCCccCCC----cEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHH--------HHHcC
Confidence 5555433333 343 4777 88877 877664 3557899 9999999887765431 22334
Q ss_pred ee-eEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhcc
Q 010058 196 IF-FETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLV 267 (519)
Q Consensus 196 ~~-~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~ 267 (519)
.. +..+++.. ++++.+|++++++++.+. ++++|+++ ++| +|...+ +++|+++|+++|+++|+|++|... .
T Consensus 152 ~~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~-~ 229 (412)
T 1ajs_A 152 FKDIRSYRYWD-TEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGF-A 229 (412)
T ss_dssp CSCEEEEECEE-TTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTT-T
T ss_pred CceeEEEeeec-CCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccc-c
Confidence 44 55555432 245789999999998763 55677666 666 776654 668999999999999999996422 1
Q ss_pred ccC-------CCCC-CCCCCeEEEEcCCCccc--CCCcceEEe---ecccccccccCcchhhhHHHHhhhcccCCCCCCc
Q 010058 268 AAG-------VIPS-PFEYADVVTTTTHKSLR--GPRGAMIFF---RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGP 334 (519)
Q Consensus 268 ~~~-------~~~~-p~~~~di~~~S~~K~l~--GprgG~i~~---~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~ 334 (519)
..+ +... .....++++.|+||.++ |.|.|++++ +++.. ..+...+...... ..+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~ 298 (412)
T 1ajs_A 230 SGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSI----------LRVLSQMQKIVRV-TWSNP 298 (412)
T ss_dssp TSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHH----------HHHHHHHHHHHHT-TTSSC
T ss_pred CCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHH----------HHHHHHHHHHHhc-ccCCC
Confidence 111 0000 00123588999999874 666799998 54210 0133333321111 12333
Q ss_pred cHHHHHHHHHHHHHhc-----CHhHHHHHHHHHHHHHHHHHHHHhcC----CEEecCCCCcceeeeeccCCCCcHHHHHH
Q 010058 335 HNHTISGLAVALKQVK-----TPEYKAYQEQVLSNSSKFARSLLERG----YDLVSGGTENHLVLVNLRNKGIDGSRVEK 405 (519)
Q Consensus 335 ~~~~iaal~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 405 (519)
+....+++..+++... ...+++..+++.++++++.+.|++.| +.++.+. .+.+.|+.+ +...+..
T Consensus 299 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~ 372 (412)
T 1ajs_A 299 PAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQ-IGMFSFTGL-----NPKQVEY 372 (412)
T ss_dssp CSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHC-CSSEEECCC-----CHHHHHH
T ss_pred ChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCC-CceEEEeCC-----CHHHHHH
Confidence 4445555556665431 22457788899999999999999986 6554432 233444432 3556777
Q ss_pred hhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 406 VLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 406 ~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.|.++||.++ | ++|+++... + ++|++++++.|.++++.
T Consensus 373 ~l~~~gv~v~----~---------~~Ris~~~~-~----~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 373 LINQKHIYLL----P---------SGRINMCGL-T----TKNLDYVATSIHEAVTK 410 (412)
T ss_dssp HHHTTCEECC----T---------TSEEEGGGC-C----TTTHHHHHHHHHHHHHH
T ss_pred HHHhCCEEec----C---------CcEEEeeeC-C----HHHHHHHHHHHHHHHHh
Confidence 7888999996 2 279997743 4 69999999999988753
No 174
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.88 E-value=1e-21 Score=202.79 Aligned_cols=349 Identities=14% Similarity=0.103 Sum_probs=202.4
Q ss_pred hhhhhhhhhhhcCHH-HHHHHHHHHHhc-ccCeeecCCCC---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHH
Q 010058 49 WINQLNAPLEEIDPE-IADIIELEKARQ-WKGLELIPSEN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 123 (519)
Q Consensus 49 ~~~~~~~~l~~~~~~-~~~~~~~e~~~~-~~~i~L~a~en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~l 123 (519)
+...+..+++..+|+ ++..+....... .+.|+|..+.. ..++.+.+++.+.... . ...|+...+..++
T Consensus 12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~-~------~~~y~~~~g~~~l 84 (409)
T 4eu1_A 12 LEAQTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATLG-T------NMDYAPVTGIASF 84 (409)
T ss_dssp ---------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCCC-S------CCCCCCTTCCHHH
T ss_pred hhhhHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCcc-c------cccCCCCCCcHHH
Confidence 333444566777776 677766655433 35688876653 3456677777665221 1 1223333445667
Q ss_pred HHHHHHHHHHHcCCC-----CCCCcceEE--eCCcHH-HHHH---HHHhhcCCCCEEEEecCCCcccccccccccCCcee
Q 010058 124 ESLCQKRALDAFQLD-----PAKWGVNVQ--SLSGSP-ANFQ---VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKIS 192 (519)
Q Consensus 124 e~~~~~~~~~~~g~~-----~~~~~~~V~--~~sGs~-a~~~---~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~ 192 (519)
++.+.+++ +|.+ ++ +|. .++|++ ++.. ++.++++|||+|++.++.|.++.. .+.
T Consensus 85 r~~ia~~~---~~~~~~~~~~~----~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~ 149 (409)
T 4eu1_A 85 VEEAQKLC---FGPTCAALRDG----RIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES--------IFA 149 (409)
T ss_dssp HHHHHHHH---HCSSCHHHHTT----CEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH--------HHH
T ss_pred HHHHHHHH---cCCCchhhccC----ceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHH
Confidence 75544444 3554 33 353 355555 5553 345567899999999988776643 233
Q ss_pred eeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhh
Q 010058 193 AVSIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 193 ~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g 265 (519)
..|..+..+++. +++++.+|++++++.+++. ++++++++ ++| +|...+ +++|.++|+++|+++|+|++|...
T Consensus 150 ~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~ 228 (409)
T 4eu1_A 150 KAGMELTPYSYY-DPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGF 228 (409)
T ss_dssp HTTCEEEEECCE-ETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred HcCCeEEEEEee-cCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccccc
Confidence 445555555543 2356789999999999742 45666655 777 887776 556889999999999999996532
Q ss_pred ccccCC-------CC-CCCCCCeEEEEcCCCcc--cCCCcceE--EeecccccccccCcchhhh----HHHHhhhcccCC
Q 010058 266 LVAAGV-------IP-SPFEYADVVTTTTHKSL--RGPRGAMI--FFRKGVKEINKQGQEVMYA----YEDKINQAVFPG 329 (519)
Q Consensus 266 ~~~~~~-------~~-~p~~~~di~~~S~~K~l--~GprgG~i--~~~~~~~~~~~~g~~~~~~----~~~~i~~~~~~~ 329 (519)
. ..+. .. .......+++.|++|++ .|.|.|++ ++.++ + +.+.+.......
T Consensus 229 ~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~-------------~~~~~l~~~~~~~~~~~ 294 (409)
T 4eu1_A 229 A-TGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASA-------------EEAKRLVSQLALLIRPM 294 (409)
T ss_dssp T-TSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSH-------------HHHHHHHHHHHHHHHHH
T ss_pred c-cCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCH-------------HHHHHHHHHHHHHHhhh
Confidence 2 1110 00 00012347788999986 57888996 44442 3 333333221111
Q ss_pred CCCCccHHHHHHHHHHHHHhc-----CHhHHHHHHHHHHHHHHHHHHHHhcC----CEEecCCCCcceeeeeccCCCCcH
Q 010058 330 LQGGPHNHTISGLAVALKQVK-----TPEYKAYQEQVLSNSSKFARSLLERG----YDLVSGGTENHLVLVNLRNKGIDG 400 (519)
Q Consensus 330 ~~g~~~~~~iaal~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~ 400 (519)
..+++.....++..+++... ....++.++++.++++++.+.|++.| +.+..+ ..+.+.|+. ++.
T Consensus 295 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~~~~~~~-----~~~ 367 (409)
T 4eu1_A 295 -YNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIER-QVGMMAYTG-----LTR 367 (409)
T ss_dssp -HSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHH-SCSSEEECC-----CCH
T ss_pred -cCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecC-CceEEEEeC-----CCH
Confidence 12334444444455555311 12356778899999999999999987 554433 223344432 345
Q ss_pred HHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 401 SRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 401 ~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
..+..+|+++||.+. |+ .||++...+ ++|++++++.|.+++
T Consensus 368 ~~~~~ll~~~gv~v~----p~---------~Ri~~~~~~-----~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 368 EQVELLRSEYHIYMT----LN---------GRAAVSGLN-----STNVEYVSQAIHNVT 408 (409)
T ss_dssp HHHHHHHHHHCEECC----TT---------CEEEGGGCC-----TTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEc----CC---------CEEEEEecC-----HhhHHHHHHHHHHHh
Confidence 556677778899985 32 477776554 477999999998875
No 175
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.88 E-value=1.4e-21 Score=200.66 Aligned_cols=322 Identities=15% Similarity=0.111 Sum_probs=205.7
Q ss_pred CeeecCCC-----CCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPSE-----NFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~e-----n~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.|++..++ .++++.+.+++.+.+.. + ++.+ +.|. .+.. +.+++++++++|++++ +|++++|+
T Consensus 47 ~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~-~--~~~~-~~~~-~~~~----~~l~~~la~~~~~~~~----~v~~~~gg 113 (395)
T 1vef_A 47 YIDCVGGYGVANLGHGNPEVVEAVKRQAET-L--MAMP-QTLP-TPMR----GEFYRTLTAILPPELN----RVFPVNSG 113 (395)
T ss_dssp EEESSHHHHTCTTCBTCHHHHHHHHHHHHH-C--CCCC-TTSC-CHHH----HHHHHHHHHTSCTTEE----EEEEESSH
T ss_pred EEEccCccccccCCCCCHHHHHHHHHHHHh-C--CCCc-cccC-CHHH----HHHHHHHHHhcCCCcC----EEEEcCcH
Confidence 46665443 24789999999998865 2 1211 2232 2333 4445888899987653 57777776
Q ss_pred H-HHHHHHHhhc--CCCCEEEEecCCCcccccccccccCCceeeeeeeeE---EEeeeeCCCC---CCCCHHHHHHHhhh
Q 010058 153 P-ANFQVYTALL--KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFE---TMPYRLDEST---GYIDYEQLEKSAAL 223 (519)
Q Consensus 153 ~-a~~~~~~all--~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~---~v~~~~d~~~---~~iD~d~l~~~i~~ 223 (519)
+ |+..++.++. .+||+|++++..+.+...... ...|.... .+|+ ..+. ...|++++++++++
T Consensus 114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~-------~~~g~~~~~~~~~p~--~~~~~~~~~~d~~~l~~~i~~ 184 (395)
T 1vef_A 114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSL-------SVTWEPKYREPFLPL--VEPVEFIPYNDVEALKRAVDE 184 (395)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHH-------HTCCCHHHHGGGCSC--SSCEEEECTTCHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhh-------hhcCCcccccccCCC--CCCeeEeCCCcHHHHHHHhcc
Confidence 6 8887887764 689999998876544322111 11111100 0000 0000 02589999999986
Q ss_pred hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCcccC-C
Q 010058 224 FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSLRG-P 293 (519)
Q Consensus 224 ~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l~G-p 293 (519)
++++|++++.+ +|...+ +++|+++|++||++||+|++|. |+...+.. + ...+ ..|+++ +||++++ +
T Consensus 185 -~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~s--~sK~~~~g~ 260 (395)
T 1vef_A 185 -ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDILT--LAKALGGGV 260 (395)
T ss_dssp -TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEEE--ECGGGGTTS
T ss_pred -CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCchhHhhhcCCCCCEEE--EcccccCCC
Confidence 89999888433 687777 9999999999999999999987 43222211 0 0011 468774 4798864 5
Q ss_pred CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Q 010058 294 RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLL 373 (519)
Q Consensus 294 rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 373 (519)
|.|++++++ ++.+.+...... ...+++...++++.++++.+.. +.+.+++.++++++.+.|+
T Consensus 261 ~~G~~~~~~--------------~~~~~l~~~~~~-~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~ 322 (395)
T 1vef_A 261 PLGVAVMRE--------------EVARSMPKGGHG-TTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLR 322 (395)
T ss_dssp SCEEEEEEH--------------HHHHTSCTTSSC-CSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHH
T ss_pred ceEEEEehH--------------HHHhhhccCCcC-CCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHH
Confidence 669999987 555544332111 1223455566666667765432 3567888999999999998
Q ss_pred hcCCEEecC-CCCcceeeeeccCCCCcHHHHHHhhc-ccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHH
Q 010058 374 ERGYDLVSG-GTENHLVLVNLRNKGIDGSRVEKVLE-SVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKV 451 (519)
Q Consensus 374 ~~g~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l 451 (519)
+.+.+++.. .....++++.+.. +..++.+.|. +.||.++ |+ ..+.+||+++..++ ++|++++
T Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~---~~~~l~~~l~~~~gi~v~----~~-----~~~~iRi~~~~~~~----~~~i~~~ 386 (395)
T 1vef_A 323 AIPSPKIREVRGMGLMVGLELKE---KAAPYIARLEKEHRVLAL----QA-----GPTVIRFLPPLVIE----KEDLERV 386 (395)
T ss_dssp TSCCTTEEEEEEETTEEEEEESS---CSHHHHHHHHHHHCEECE----ES-----STTEEEECCCTTCC----HHHHHHH
T ss_pred HhhcCceEEEEEEEEEEEEEEcC---hHHHHHHHHHHHCCeEEe----cC-----CCCEEEEeCCCCCC----HHHHHHH
Confidence 876422111 1223466666642 2566778887 8999997 33 24689999887777 8999999
Q ss_pred HHHHHHHH
Q 010058 452 AEFFDAAV 459 (519)
Q Consensus 452 ~~~l~~~l 459 (519)
++.|++++
T Consensus 387 ~~~l~~~l 394 (395)
T 1vef_A 387 VEAVRAVL 394 (395)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998875
No 176
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.87 E-value=3.7e-20 Score=192.27 Aligned_cols=335 Identities=12% Similarity=0.040 Sum_probs=208.3
Q ss_pred CeeecCCC--CC---CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPSE--NF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~e--n~---~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.+++.++. ++ .+|.|.+++.+.+.... .++..+ |. .+... ..++.++++++++++ +|.+++|+
T Consensus 45 ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~--~~~~~~-~~-~~~~~----~l~~~la~~~~~~~~----~v~~~~gg 112 (429)
T 1s0a_A 45 LVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS--HVMFGG-IT-HAPAI----ELCRKLVAMTPQPLE----CVFLADSG 112 (429)
T ss_dssp EEESSTTTTTCTTCBSCHHHHHHHHHHHHHCS--CCCCSS-EE-CHHHH----HHHHHHHHHSCTTCC----EEEEESSH
T ss_pred EEEcCccHhhccCCCCCHHHHHHHHHHHHhcc--cccccc-cC-CHHHH----HHHHHHHHhCCCCCC----EEEEeCCH
Confidence 46666555 22 58999999999886522 121111 11 12222 333678899987664 58888877
Q ss_pred H-HHHHHHHhhc---C----CCCEEEEecCCCcccccccccc-c-----CCceeeeeeeeEEEeeeeC---CCCCCCCHH
Q 010058 153 P-ANFQVYTALL---K----PHERIMALDLPHGGHLSHGYQT-D-----TKKISAVSIFFETMPYRLD---ESTGYIDYE 215 (519)
Q Consensus 153 ~-a~~~~~~all---~----pGD~Vl~~~~~~~~~~~~~~~~-~-----~~~v~~~g~~~~~v~~~~d---~~~~~iD~d 215 (519)
+ |+..++.++. + |||+|+++++.+.+........ . .............++++.+ ...+.+|++
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 192 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence 6 8887777653 2 7999999987654432111000 0 0000000001233443321 112358999
Q ss_pred HHHHHhhh--hCCcEEEEccc--c-cccccc----HHHHHHHHhhcCCEEEehhhhh-hhccccCCCCCCCC-CCeEEEE
Q 010058 216 QLEKSAAL--FRPKLIVAGAS--A-YARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAAGVIPSPFE-YADVVTT 284 (519)
Q Consensus 216 ~l~~~i~~--~k~klIi~~~s--n-~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~~~~~~p~~-~~di~~~ 284 (519)
++++++++ .++++|++++. | +|...+ +++|+++|++||+++|+|++|. .|..........+. ..|++++
T Consensus 193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~ 272 (429)
T 1s0a_A 193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCL 272 (429)
T ss_dssp HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE
T ss_pred HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEe
Confidence 99999874 36678888765 4 676666 9999999999999999999986 32211100000001 4688876
Q ss_pred cCCCcccC--CCcceEEeecccccccccCcchhhhHHHHhhhcc----cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHH
Q 010058 285 TTHKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAV----FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQ 358 (519)
Q Consensus 285 S~~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~----~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~ 358 (519)
| |+|+| .|.|++++++ ++.+.+.... ......+++...+++..++++.+.+. .+.
T Consensus 273 s--K~l~~G~~~iG~~~~~~--------------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~---~~~ 333 (429)
T 1s0a_A 273 G--KALTGGTMTLSATLTTR--------------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESG---DWQ 333 (429)
T ss_dssp C--GGGGTSSSCCEEEEECH--------------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTC---HHH
T ss_pred c--ccccCCCccceEEEeCH--------------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhC---CHH
Confidence 5 88876 5779999987 5555444320 01112234566666767788765542 456
Q ss_pred HHHHHHHHHHHHHHHhc----CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEec
Q 010058 359 EQVLSNSSKFARSLLER----GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG 434 (519)
Q Consensus 359 ~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~ 434 (519)
+++.++++++.+.|+++ ++..+.+ ...++++++.. +.+..++.+.|.+.||.++ |. .+.|||+
T Consensus 334 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~--~g~~~~~~~~~-~~~~~~l~~~l~~~Gi~v~----~~------~~~iRis 400 (429)
T 1s0a_A 334 QQVADIEVQLREQLAPARDAEMVADVRV--LGAIGVVETTH-PVNMAALQKFFVEQGVWIR----PF------GKLIYLM 400 (429)
T ss_dssp HHHHHHHHHHHHHHGGGGGCTTEEEEEE--ETTEEEEEESS-CBCHHHHHHHHHHTTEECC----CB------TTEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEE--eeEEEEEEECC-cccHHHHHHHHHHCCCEEe----cc------CCEEEEE
Confidence 77888899999999875 3332222 23456666643 3457778888888999996 22 2689999
Q ss_pred cCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 435 TPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 435 ~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++..++ ++|++++++.|++++.
T Consensus 401 ~~~~~t----~e~i~~~~~~l~~~~~ 422 (429)
T 1s0a_A 401 PPYIIL----PQQLQRLTAAVNRAVQ 422 (429)
T ss_dssp CCTTCC----HHHHHHHHHHHHHHTS
T ss_pred CCCCCC----HHHHHHHHHHHHHHHH
Confidence 988888 8999999999998864
No 177
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.87 E-value=8.9e-21 Score=198.24 Aligned_cols=347 Identities=14% Similarity=0.121 Sum_probs=209.1
Q ss_pred hhhcCH-HHHHHHHHHHHhccc-CeeecCCCC-------CCcHHHHHHHhhHhh--hccCCCCCCCCCCCCchhHHHHHH
Q 010058 57 LEEIDP-EIADIIELEKARQWK-GLELIPSEN-------FTSVSVMQAVGSVMT--NKYSEGYPGARYYGGNEYIDMAES 125 (519)
Q Consensus 57 l~~~~~-~~~~~~~~e~~~~~~-~i~L~a~en-------~~~~~V~ea~~~~l~--~~~~~g~p~~~~y~~~~~~~~le~ 125 (519)
+...++ .++.+.......... .|+|..+.. ++.+.|.+++..... .....+ |....+..++++
T Consensus 28 ~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~------Y~~~~G~~~lr~ 101 (448)
T 3meb_A 28 FPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKE------YPPVAGFPLFLE 101 (448)
T ss_dssp CCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCS------CCCTTCCHHHHH
T ss_pred CCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCC------CCCCcchHHHHH
Confidence 444444 356666554444333 488865543 345777777665541 111112 233344556664
Q ss_pred HHHHHHHHHcCCC-----CCCCcceEEe--CCcHH-HHHH--HHHhhcCCCCEEEEecCCCcccccccccccCCcee---
Q 010058 126 LCQKRALDAFQLD-----PAKWGVNVQS--LSGSP-ANFQ--VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKIS--- 192 (519)
Q Consensus 126 ~~~~~~~~~~g~~-----~~~~~~~V~~--~sGs~-a~~~--~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~--- 192 (519)
.+.+++ +|.+ ++ +|.+ |+|++ |+.. .+.+++.|||+|+++++.|.++... +.
T Consensus 102 ~ia~~l---~g~~~~~~~~~----~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~--------~~~~~ 166 (448)
T 3meb_A 102 AAQFLM---FGKDSKAAQEG----RIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGI--------YDKVF 166 (448)
T ss_dssp HHHHHH---HCTTCHHHHTT----CEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHH--------HHHHH
T ss_pred HHHHHh---cCCCccccCcC----cEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHH--------HHhhH
Confidence 443433 3776 33 4887 88887 7754 5667789999999999888776542 22
Q ss_pred -eeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhh--hCCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhh
Q 010058 193 -AVSIFFETMPYRLDES-TGYIDYEQLEKSAAL--FRPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHI 263 (519)
Q Consensus 193 -~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~--~k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~ 263 (519)
..|..+..+++. +++ ++.+|++++++.+++ .++++++++ ++| +|...+ +++|.++|+++|+++|+|++|.
T Consensus 167 ~~~G~~v~~~~~~-~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~ 245 (448)
T 3meb_A 167 NKLKVPYKEYTYL-RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQ 245 (448)
T ss_dssp CTTTSCCEEECCB-CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT
T ss_pred HhCCCeEEEEecc-ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 335445555542 444 588999999999985 256777766 666 787666 5669999999999999999965
Q ss_pred hhccccCC--CCCC------CCCCeEEEEcCCCcc--cCCCcceE--Ee--------ecc-cccccccCcchhhhHHHHh
Q 010058 264 SGLVAAGV--IPSP------FEYADVVTTTTHKSL--RGPRGAMI--FF--------RKG-VKEINKQGQEVMYAYEDKI 322 (519)
Q Consensus 264 ~g~~~~~~--~~~p------~~~~di~~~S~~K~l--~GprgG~i--~~--------~~~-~~~~~~~g~~~~~~~~~~i 322 (519)
. +...+. ...+ .....+++.|+||.+ .|+|.|++ ++ .++ .. ..+...+
T Consensus 246 ~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~----------~~l~~~l 314 (448)
T 3meb_A 246 G-FATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALS----------AAMVSGM 314 (448)
T ss_dssp T-TSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHH----------HHHHHHH
T ss_pred c-ccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHH----------HHHHHHH
Confidence 2 221110 0000 012357789999976 57888997 55 321 00 0122222
Q ss_pred hhcccCCCCCCccHHHHHHHHHHHHHhc-----CHhHHHHHHHHHHHHHHHHHHHHhcCCE---------EecCCCCcce
Q 010058 323 NQAVFPGLQGGPHNHTISGLAVALKQVK-----TPEYKAYQEQVLSNSSKFARSLLERGYD---------LVSGGTENHL 388 (519)
Q Consensus 323 ~~~~~~~~~g~~~~~~iaal~~al~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~---------~~~~~~~~~~ 388 (519)
...... ...+++.....+++.++.... ....++.++++.+++++|.+.|++.|+. +..+ ....+
T Consensus 315 ~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~-~~g~~ 392 (448)
T 3meb_A 315 TLQIRK-TWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILT-AIGMF 392 (448)
T ss_dssp HHHHHT-TTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHH-CCSSE
T ss_pred HHHHhc-ccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCC-CceEE
Confidence 221111 223445555555444443210 0235777888999999999999987532 2222 12333
Q ss_pred eeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 389 VLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 389 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.|+.+ +.+.+..+|+++||.+. ||. .||++...++ ++++++++.|.++++
T Consensus 393 ~~~~~-----~~~~~~~ll~~~gV~v~----~G~--------gRis~a~~~~-----~~i~~~~~~l~~~l~ 442 (448)
T 3meb_A 393 TFTGL-----TPEHVDYLKEKWSIYLV----KAG--------GRMSMCGLTE-----SNCDYVAEAIHDAVT 442 (448)
T ss_dssp EECCC-----CHHHHHHHHHHHCEEEC----SGG--------GEEEGGGCCT-----TTHHHHHHHHHHHHH
T ss_pred EecCC-----CHHHHHHHHHhCCEEEe----CCC--------cEEEEecCCH-----HHHHHHHHHHHHHHH
Confidence 44333 45566667788999996 432 3998865444 779999999999987
No 178
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.87 E-value=1.9e-21 Score=199.61 Aligned_cols=327 Identities=13% Similarity=0.097 Sum_probs=203.3
Q ss_pred ccCeeecCCC---C----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC--CCCCCCcceE
Q 010058 76 WKGLELIPSE---N----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ--LDPAKWGVNV 146 (519)
Q Consensus 76 ~~~i~L~a~e---n----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g--~~~~~~~~~V 146 (519)
.+.|+|..+. + ++++.+.+++.+.+.+....+ |+...+..++++.+.+++....+ ++++ +|
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~lr~~la~~~~~~~~~~~~~~----~v 95 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKN------YLGIDGIPEFGRCTQELLFGKGSALINDK----RA 95 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCC------CCCTTCCHHHHHHHHHHHHCTTCHHHHTT----CE
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccC------CCCCCCCHHHHHHHHHHHhcCCCCccccc----cE
Confidence 3568887776 1 457999999988775421112 33334456677555555533222 2343 47
Q ss_pred Ee--CCcHH-HHHHHHHhh--cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHh
Q 010058 147 QS--LSGSP-ANFQVYTAL--LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSA 221 (519)
Q Consensus 147 ~~--~sGs~-a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i 221 (519)
.+ ++|++ |+..++.++ +.|||+|+++++.|.++... +...|..+..+++..+ +++.+|++++++.+
T Consensus 96 ~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l 166 (396)
T 2q7w_A 96 RTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSV--------FNSAGLEVREYAYYDA-ENHTLDFDALINSL 166 (396)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHH--------HHHTTCEEEEEECEET-TTTEECHHHHHHHH
T ss_pred EEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHH--------HHHcCCceEEEecccC-CCCCcCHHHHHHHH
Confidence 76 88777 888777655 57999999999877665432 2233544555554321 35789999999998
Q ss_pred hhh--CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccc-------cC-CCCCCCCCCeEEEEcC
Q 010058 222 ALF--RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVA-------AG-VIPSPFEYADVVTTTT 286 (519)
Q Consensus 222 ~~~--k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~-------~~-~~~~p~~~~di~~~S~ 286 (519)
.+. ++++++++ ++| +|...+ +++|+++|+++|+++|+|++|...... .. +... ...++++.|+
T Consensus 167 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~ 244 (396)
T 2q7w_A 167 NEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM--HKELIVASSY 244 (396)
T ss_dssp TTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHH--CSCEEEEEEC
T ss_pred HhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhc--CCcEEEEEec
Confidence 753 35677766 666 787664 568899999999999999997542111 00 1000 1246889999
Q ss_pred CCcc--cCCCcceEEe---ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh-----cCHhHHH
Q 010058 287 HKSL--RGPRGAMIFF---RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV-----KTPEYKA 356 (519)
Q Consensus 287 ~K~l--~GprgG~i~~---~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~-----~~~~~~~ 356 (519)
||++ +|.|.|++++ +++.. .++...+...... ..++++....+++..+++.. ....+++
T Consensus 245 sK~~~~~G~riG~~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~ 313 (396)
T 2q7w_A 245 SXNFGLYNERVGACTLVAADSETV----------DRAFSQMKAAIRA-NYSNPPAHGASVVATILSNDALRAIWEQELTD 313 (396)
T ss_dssp TTTTTCGGGCCEEEEEECSSHHHH----------HHHHHHHHHHHHT-TTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred cccccccccccceEEEEcCCHHHH----------HHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhcChhhHHHHHHHHHH
Confidence 9987 4777899987 33100 0233322221111 12344555555555555432 0124567
Q ss_pred HHHHHHHHHHHHHHHHHhcC----CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEE
Q 010058 357 YQEQVLSNSSKFARSLLERG----YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 432 (519)
..+++.++++.+.+.|++.| +.+..+. .+.+.++.+ +...+...|.++||.+. | ++|
T Consensus 314 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~l~~~gv~v~----~---------~~R 374 (396)
T 2q7w_A 314 MRQRIQRMRQLFVNTLQEKGANRDFSFIIKQ-NGMFSFSGL-----TKEQVLRLREEFGVYAV----A---------SGR 374 (396)
T ss_dssp C-CHHHHHHHHHHHHHHHTTCCSCCTHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECC----T---------TCE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcceecCC-CceEEEecC-----CHHHHHHHHHhcCeeec----C---------Cce
Confidence 77888999999999999986 5554432 233444433 34567788888999985 2 379
Q ss_pred eccCccccCCCCHHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
|+++.. + ++|++++++.|+++
T Consensus 375 is~~~~-~----~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 375 VNVAGM-T----PDNMAPLCEAIVAV 395 (396)
T ss_dssp EEGGGC-C----TTTHHHHHHHHHHH
T ss_pred EEEeec-C----HHHHHHHHHHHHhc
Confidence 998754 4 69999999999875
No 179
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.87 E-value=6.5e-22 Score=205.13 Aligned_cols=286 Identities=16% Similarity=0.158 Sum_probs=186.3
Q ss_pred cCHHHHHHHHHHHHhcccCeeecCCCCCCcHHHHHHHhhHhhh-ccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC
Q 010058 60 IDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTN-KYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD 138 (519)
Q Consensus 60 ~~~~~~~~~~~e~~~~~~~i~L~a~en~~~~~V~ea~~~~l~~-~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~ 138 (519)
..+++.+.+.++.+++...++.++.+| .+.|++++.+.... ....+..+. .|+ +..++.+++++++++|.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~n--~~~vl~A~~~~~~~~~~~~~~~g~-~y~-----~~~~~~l~~~la~~~g~~ 81 (431)
T 3ht4_A 10 KIAPIVKEVESQITEVHKRADEVIESN--QFRVLESFGKHKISDSHFIPTTGY-GYD-----DIGRDTLEKVYADVFGAE 81 (431)
T ss_dssp TSHHHHHHHHHHTHHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGSCCCCTT-CCS-----CHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhchhhhhcCCCCCC-CCC-----hhhHHHHHHHHHHHhCCC
Confidence 345666666677777777788877776 56888888764321 111111111 122 122444558999999997
Q ss_pred CCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEec-CCCccccccccccc--CCceeeeeeeeEEEeeeeCCCCCCCCHH
Q 010058 139 PAKWGVNVQSLSGSPANFQVYTALLKPHERIMALD-LPHGGHLSHGYQTD--TKKISAVSIFFETMPYRLDESTGYIDYE 215 (519)
Q Consensus 139 ~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~-~~~~~~~~~~~~~~--~~~v~~~g~~~~~v~~~~d~~~~~iD~d 215 (519)
.+. ++++++||+.|+..++.++++|||+|++++ +.|+++........ .......|..+..++ .+ +++.+|++
T Consensus 82 ~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~--~~-~~~~~d~e 156 (431)
T 3ht4_A 82 AGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVP--LT-EGGLVDFE 156 (431)
T ss_dssp EEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECC--BC-TTSSBCHH
T ss_pred ccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeC--CC-CCCCcCHH
Confidence 642 234578998899999999999999999988 77776543211000 001122344444444 44 34889999
Q ss_pred HHHHHhhhhCCcEEEEcc-c----c-ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCC
Q 010058 216 QLEKSAALFRPKLIVAGA-S----A-YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTH 287 (519)
Q Consensus 216 ~l~~~i~~~k~klIi~~~-s----n-~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~ 287 (519)
++++++++ +|++|+++. + + ++...|+++|+++|++ +|+++++|++|..+......... ++|++++|+|
T Consensus 157 ~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~---g~Di~~~S~s 232 (431)
T 3ht4_A 157 AVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHV---GADLMAGSLI 232 (431)
T ss_dssp HHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGT---TCSEEEEETT
T ss_pred HHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcccc---CCeEEEcCcc
Confidence 99999987 899999883 2 2 4567789999999999 99999999998766532211111 6899999999
Q ss_pred CcccC---CCcceEEeecccccccccCcchhhhHHHHhhhcc-cCCC--CCCccHHHHHHHHHHHHHhcCHhHHHHHHHH
Q 010058 288 KSLRG---PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAV-FPGL--QGGPHNHTISGLAVALKQVKTPEYKAYQEQV 361 (519)
Q Consensus 288 K~l~G---prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-~~~~--~g~~~~~~iaal~~al~~~~~~~~~~~~~~~ 361 (519)
|+|+| +.||++++++ ++.+.+.... .++. ..++.......+..++.. .....++.
T Consensus 233 K~lgg~~~~~GG~v~~~~--------------~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 293 (431)
T 3ht4_A 233 KNPGGGIVKTGGYIVGKE--------------QYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFL-----APHVAGQA 293 (431)
T ss_dssp SGGGTTTCSSCEEEEECH--------------HHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHH-----HHHHHHHH
T ss_pred ccCCCCCCCceEEEEecH--------------HHHHHHHHHhccCCcccccCccHHHHHHHHhHhhh-----HHHHHHHH
Confidence 99876 7889999987 5555544321 2221 112211111112223322 35667888
Q ss_pred HHHHHHHHHHHHhcCCEEec
Q 010058 362 LSNSSKFARSLLERGYDLVS 381 (519)
Q Consensus 362 ~~~~~~l~~~L~~~g~~~~~ 381 (519)
.++++++++.|+++|+++.+
T Consensus 294 ~~~a~~l~~~L~~~g~~v~p 313 (431)
T 3ht4_A 294 LKGAIFTAAFLEKLGMNTSP 313 (431)
T ss_dssp HHHHHHHHHHHHHHTCCEES
T ss_pred HHHHHHHHHHHHhCcCEecC
Confidence 99999999999999988744
No 180
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=7.8e-21 Score=197.57 Aligned_cols=288 Identities=16% Similarity=0.105 Sum_probs=186.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+...+++ +++++++|.+. .|.++||+.|+..++.++++|||+|++++..|++....... .....|..
T Consensus 114 ~~~~~l~----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~----~~~~~G~~ 180 (445)
T 1qgn_A 114 PTTVVLE----EKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIET----ILPKMGIT 180 (445)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHH----TGGGGTCE
T ss_pred hHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH----HHHHcCCE
Confidence 4444555 88889999863 59999999988889999999999999999888775432110 01122444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCC-cEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRP-KLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~-klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
+..++ .+ |++++++++++ ++ ++|+++ ++| +|...|+++|.++|+++|+++++|++|..+... .
T Consensus 181 v~~v~--~~------d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~-----~ 246 (445)
T 1qgn_A 181 ATVID--PA------DVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQ-----K 246 (445)
T ss_dssp EEEEC--SS------CHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----C
T ss_pred EEEeC--CC------CHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----C
Confidence 44443 21 89999999987 88 999988 666 789999999999999999999999998766432 2
Q ss_pred CCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 275 PFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
|+. ++|++++|+||+++|+. +|++++++ ++.+.+...... ..++++......+..+++
T Consensus 247 ~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~--------------~l~~~l~~~~~~-~g~~~~~~~a~~~~~~l~--- 308 (445)
T 1qgn_A 247 ALALGADLVLHSATKFLGGHNDVLAGCISGPL--------------KLVSEIRNLHHI-LGGALNPNAAYLIIRGMK--- 308 (445)
T ss_dssp TTTTTCSEEEECTTTTTTCSSSCCCEEEEECH--------------HHHHHHHHHHHH-HCCCCCHHHHHHHHHHGG---
T ss_pred ccccCCEEEEECCcccccccccceEEEEEECH--------------HHHHHHHHHHHH-hCCCCCHHHHHHHHHhHH---
Confidence 233 68999999999998875 79999987 444443321110 012223222222222222
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc-CC-EEecCCC---------------CcceeeeeccCCCCcHHHHHHhhcccCeE
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER-GY-DLVSGGT---------------ENHLVLVNLRNKGIDGSRVEKVLESVHIA 413 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~L~~~gI~ 413 (519)
.+....++..++++.+.+.|++. ++ .+..++. ...++.+.+.....+...+.+.|+..+|.
T Consensus 309 --~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~ 386 (445)
T 1qgn_A 309 --TLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIA 386 (445)
T ss_dssp --GHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEEC
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEe
Confidence 24556677788899999999987 55 3443321 12344444432000133444555445676
Q ss_pred Eccccc------C---------CC---CCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 414 ANKNTV------P---------GD---VSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 414 v~~~~~------p---------~~---~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++.... | .. .....++.||+|++ .||++.+++.|++++.
T Consensus 387 ~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--------~Edid~li~~L~~al~ 443 (445)
T 1qgn_A 387 PSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--------VEDFDDLKADILQALD 443 (445)
T ss_dssp SCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--------SSCHHHHHHHHHHHHH
T ss_pred ccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 653211 0 00 00112478999976 3689999999988875
No 181
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.87 E-value=2e-21 Score=204.01 Aligned_cols=342 Identities=15% Similarity=0.135 Sum_probs=204.1
Q ss_pred CeeecCCCCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHH
Q 010058 78 GLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANF 156 (519)
Q Consensus 78 ~i~L~a~en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~ 156 (519)
.|++.++.. + +.|.+++.+.+.. | ...|+......+++ +++++++|.+ ++++++|++ |+.
T Consensus 43 ylD~~~~~~-~-~~v~~a~~~~l~~----~---~~~y~~~~~~~~l~----~~la~~~~~~------~v~~t~~gt~A~~ 103 (467)
T 2oqx_A 43 FIDLLTDSG-T-GAVTQSMQAAMMR----G---DEAYSGSRSYYALA----ESVKNIFGYQ------YTIPTHQGRGAEQ 103 (467)
T ss_dssp SEECSCCSS-C-SCCCHHHHHHTTS----C---CCCSSSCHHHHHHH----HHHHHHHCCS------EEEEEC--CCSHH
T ss_pred eEecccCCC-c-HHHHHHHHHHhcc----C---cceeccCchhHHHH----HHHHHHhCcC------cEEEcCCcHHHHH
Confidence 355543332 2 7788888777643 2 12455556666666 7788888874 266665554 888
Q ss_pred HHHHhhcCC-----C----CEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC---CCCCCCCHHHHHHHhhh-
Q 010058 157 QVYTALLKP-----H----ERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD---ESTGYIDYEQLEKSAAL- 223 (519)
Q Consensus 157 ~~~~all~p-----G----D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d---~~~~~iD~d~l~~~i~~- 223 (519)
.++.++++| | |+|++. ..|+........... ...+.+... .+++.+ +.++.+|+++|++++++
T Consensus 104 ~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~d~~~Le~~i~~~ 179 (467)
T 2oqx_A 104 IYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQING-CTVRNVYIK--EAFDTGVRYDFKGNFDLEGLERGIEEV 179 (467)
T ss_dssp HHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHHHTT-CEEEECBCT--TTTCTTSCCTTTTCBCHHHHHHHHHHH
T ss_pred HHHHHHhccccccCCCCccceEEec-ccccccchhhhhccC-cceeecccc--ccccCCCCCCccCCcCHHHHHHHHHhc
Confidence 899998888 9 997765 344221100110000 011111100 011111 13467899999999985
Q ss_pred --hCCcEEEEc-ccc-c-cccc---cHHHHHHHHhhcCCEEEehhhhhh-hcc--------ccCCCCCCC-----CCCeE
Q 010058 224 --FRPKLIVAG-ASA-Y-ARLY---DYARIRKVCDKQKAVMLADMAHIS-GLV--------AAGVIPSPF-----EYADV 281 (519)
Q Consensus 224 --~k~klIi~~-~sn-~-g~~~---d~~~i~~ia~~~~~~livD~ah~~-g~~--------~~~~~~~p~-----~~~di 281 (519)
.++++|+++ ++| + |... ++++|+++|++||++||+|++|.. +.. ..+.....+ .++|+
T Consensus 180 ~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ 259 (467)
T 2oqx_A 180 GPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADM 259 (467)
T ss_dssp CGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSE
T ss_pred CCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCe
Confidence 378999988 455 3 5543 478999999999999999988776 332 222211011 24788
Q ss_pred EEEcCCCcccCCCcceEEeecc-cccccccCcchhhhHHHHhhhcc--cCC--CCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 282 VTTTTHKSLRGPRGAMIFFRKG-VKEINKQGQEVMYAYEDKINQAV--FPG--LQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 282 ~~~S~~K~l~GprgG~i~~~~~-~~~~~~~g~~~~~~~~~~i~~~~--~~~--~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
+++|+||+++.|.||+++++++ +. +...++.... ..+ ..++.....++++..++..... ++
T Consensus 260 ~~~s~sK~~g~~~Gg~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~ 325 (467)
T 2oqx_A 260 LAMSAKKDAMVPMGGLLCMKDDSFF-----------DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LD 325 (467)
T ss_dssp EEEESSSTTCCSSCEEEEECSGGGH-----------HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HH
T ss_pred EEEecccccCCCCceEEEecChhHH-----------HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HH
Confidence 8999999997776888888763 21 1222222211 111 1234444445455444443222 23
Q ss_pred HHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccC--CCCc-----HHHHHHhh-cccCeEEcccc-c-CCC----
Q 010058 357 YQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRN--KGID-----GSRVEKVL-ESVHIAANKNT-V-PGD---- 422 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~--~~~~-----~~~~~~~L-~~~gI~v~~~~-~-p~~---- 422 (519)
..++..++++++.+.|.+.|++++ + ...+++++++.. .+.+ +..+.+.| .+.||.+.... + .+.
T Consensus 326 ~~~~~~~~~~~l~~~L~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~ 403 (467)
T 2oqx_A 326 WLAYRIAQVQYLVDGLEEIGVVCQ-Q-AGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKT 403 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEE-E-ECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCeee-c-CCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccc
Confidence 345567888999999998888776 4 234566777632 1233 33456777 88999987421 0 010
Q ss_pred --CCCCCCCeEEeccCcc-ccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 423 --VSAMVPGGIRMGTPAL-TSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 423 --~~~~~~~~iRi~~~~~-ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
..+...+.||++++.. ++ ++|++++++.|.+++...
T Consensus 404 g~~~~~~~~~iRl~~~~~~~t----~e~i~~~~~~l~~~l~~~ 442 (467)
T 2oqx_A 404 GKQLPCPAELLRLTIPRATYT----QTHMDFIIEAFKHVKENA 442 (467)
T ss_dssp CSBCCCSCCEEEECCCTTTSC----HHHHHHHHHHHHHHHHSG
T ss_pred cccccCccCeEEEEecCCCCC----HHHHHHHHHHHHHHHhhh
Confidence 0111247899999877 77 899999999999998754
No 182
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.87 E-value=2.4e-21 Score=206.92 Aligned_cols=339 Identities=12% Similarity=0.096 Sum_probs=202.8
Q ss_pred CeeecCCCC-CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHH-HHHHHHHHHHcCC--CC-CCCcceEEeCCcH
Q 010058 78 GLELIPSEN-FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE-SLCQKRALDAFQL--DP-AKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~en-~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le-~~~~~~~~~~~g~--~~-~~~~~~V~~~sGs 152 (519)
.|+|..+++ ++++.+.+++.+.+.. .+||.. .+...++ +.++.++.+.++. +. +. .+|++++|+
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~~~~---~~Y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~~~~--~~I~~t~G~ 174 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDGILG---CNYPVP------PRMLNISEKIVRQYIIREMGADAIPSES--VNLFAVEGG 174 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHT---CSCCSS------SSCCHHHHHHHHHHHHHHTTCTTSCGGG--EEEEEEEHH
T ss_pred hhecccCCCCCCChHHHHHHHHhhhc---CCCCCC------cCCHHHHHHHHHHHHHHhccCCCCCCCc--ceEEEECCH
Confidence 355544544 3456777777766532 144433 2222333 4455555665543 11 11 379999999
Q ss_pred H-HHHHHHHh-----hcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-CCCCCHHHHHHHhhhhC
Q 010058 153 P-ANFQVYTA-----LLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-TGYIDYEQLEKSAALFR 225 (519)
Q Consensus 153 ~-a~~~~~~a-----ll~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~l~~~i~~~k 225 (519)
+ ++..++.+ +++|||+|+++++.|.++.... .+.+...+.++++.+++ ++.+|++++++.+.. +
T Consensus 175 ~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-~ 245 (546)
T 2zy4_A 175 TAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP--------ELAQYALEEVAINADPSLNWQYPDSELDKLKDP-A 245 (546)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH--------HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST-T
T ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH--------HHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC-C
Confidence 8 77767776 5799999999998776654311 11121222333444433 467999999987755 8
Q ss_pred CcEEEEc-ccc-cccccc---HHHHHHHH--hhcCCEEEehhhhhhhccccCCCCCCC---CCCeEEEEcCCCcc--cCC
Q 010058 226 PKLIVAG-ASA-YARLYD---YARIRKVC--DKQKAVMLADMAHISGLVAAGVIPSPF---EYADVVTTTTHKSL--RGP 293 (519)
Q Consensus 226 ~klIi~~-~sn-~g~~~d---~~~i~~ia--~~~~~~livD~ah~~g~~~~~~~~~p~---~~~di~~~S~~K~l--~Gp 293 (519)
+++|+++ ++| +|...+ +++|.++| +++|++||+|+++.... . + ..+.+ .+.++++.|++|++ +|+
T Consensus 246 ~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~-~-~-~~s~~~~~~~~~i~~~S~SK~~g~~Gl 322 (546)
T 2zy4_A 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFA-D-D-FQSLFAICPENTLLVYSFSKYFGATGW 322 (546)
T ss_dssp EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGS-T-T-CCCHHHHCGGGEEEEEESTTTTTCGGG
T ss_pred CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhc-c-c-CcCHHHhCCCCEEEEEeCccccCCCCc
Confidence 8998888 666 787776 56678888 78999999999976332 1 1 11100 14578899999987 588
Q ss_pred CcceEEeecccccccccCcchhhhHHHHhhhc-----------------------------------ccCCCCCCccHHH
Q 010058 294 RGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-----------------------------------VFPGLQGGPHNHT 338 (519)
Q Consensus 294 rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-----------------------------------~~~~~~g~~~~~~ 338 (519)
|.|+++++++ ++.+.+... .......+.+...
T Consensus 323 RiG~~~~~~~-------------~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 389 (546)
T 2zy4_A 323 RLGVVAAHQQ-------------NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQ 389 (546)
T ss_dssp CEEEEEEESS-------------CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHH
T ss_pred ceEEEEECCH-------------HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHH
Confidence 8899999874 122211000 0001111223333
Q ss_pred HHHHH--HHHHHhc--CHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCC---------------CC-
Q 010058 339 ISGLA--VALKQVK--TPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNK---------------GI- 398 (519)
Q Consensus 339 iaal~--~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~---------------~~- 398 (519)
..+++ +....+. ....+..++.+.++++.+.+.|. .++.+. ++..+.++|+++... +.
T Consensus 390 Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~ 467 (546)
T 2zy4_A 390 QVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-MPPLRD-ENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSS 467 (546)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-SSCCCC-TTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-CCcccC-CCCeeEEEEEEHHHhhcccccHHHHHHhhccCC
Confidence 33221 1111221 23346777788888888888875 444322 223345567765310 11
Q ss_pred cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHh
Q 010058 399 DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLAL 463 (519)
Q Consensus 399 ~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~ 463 (519)
+...+.+.|.+.||.+. ||.......+++||++.. .+ +++++++++.|++++....
T Consensus 468 ~~~~l~~ll~~~gV~v~----pG~~F~~~~~~iRis~~~-~~----~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 468 TGDMLFRIADETGIVLL----PGRGFGSNRPSGRASLAN-LN----EYEYAAIGRALRKMADELY 523 (546)
T ss_dssp HHHHHHHHHHHHSCCCE----ESSCTTCSSCEEEEESSS-SC----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCEEEe----CccccCCCCCeEEEEecc-CC----HHHHHHHHHHHHHHHHHHH
Confidence 23446778888999997 665411235789999863 24 6899999999999887553
No 183
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.87 E-value=1.8e-21 Score=199.70 Aligned_cols=326 Identities=14% Similarity=0.101 Sum_probs=202.0
Q ss_pred ccCeeecCCCC-------CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe
Q 010058 76 WKGLELIPSEN-------FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS 148 (519)
Q Consensus 76 ~~~i~L~a~en-------~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~ 148 (519)
.+.|+|..++. ++++.|.+++.+.+.+....+| +...+..++++.+.+++... +.+++ +|.+
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~lr~~la~~~~~~-~~~~~----~v~~ 94 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTY------AGLSGEPEFQKAMGELILGD-GLKSE----TTAT 94 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCC------CCSSCCHHHHHHHHHHHHGG-GCCGG----GEEE
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCC------CCCCCcHHHHHHHHHHHhCC-CCCcc----cEEE
Confidence 35688887762 4579999999887754211123 22234456664444444221 22443 5777
Q ss_pred --CCcHH-HHHHHHHhhc--CCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh
Q 010058 149 --LSGSP-ANFQVYTALL--KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL 223 (519)
Q Consensus 149 --~sGs~-a~~~~~~all--~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~ 223 (519)
++|++ |+..++.++. .|||+|+++++.|.++.. .+...|..+..+++..+ +++.+|++++++.+++
T Consensus 95 ~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~ 165 (394)
T 2ay1_A 95 LATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVS--------IMNFMGLPVQTYRYFDA-ETRGVDFEGMKADLAA 165 (394)
T ss_dssp EEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHHTCCEEEEECEET-TTTEECHHHHHHHHHT
T ss_pred EecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCceEEEecccc-cCCccCHHHHHHHHHh
Confidence 77777 8887777764 499999999977766543 22233544555554321 3578999999999876
Q ss_pred h--CCcEEEEc-ccc-cccccc---HHHHHHHHhhcCCEEEehhhhhhhccc-------cC-CCCCCCCCCeEEEEcCCC
Q 010058 224 F--RPKLIVAG-ASA-YARLYD---YARIRKVCDKQKAVMLADMAHISGLVA-------AG-VIPSPFEYADVVTTTTHK 288 (519)
Q Consensus 224 ~--k~klIi~~-~sn-~g~~~d---~~~i~~ia~~~~~~livD~ah~~g~~~-------~~-~~~~p~~~~di~~~S~~K 288 (519)
. ++++++++ ++| +|...+ +++|.++|+++|+++|+|++|...... .. +... ....+++.|+||
T Consensus 166 ~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK 243 (394)
T 2ay1_A 166 AKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASR--IPEVLIAASCSK 243 (394)
T ss_dssp CCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHH--CSSEEEEEECTT
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhc--CCCEEEEEeccC
Confidence 3 35666656 666 787665 567899999999999999997642211 10 1000 023577889999
Q ss_pred cc--cCCCcceEEe---ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh-----cCHhHHHHH
Q 010058 289 SL--RGPRGAMIFF---RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV-----KTPEYKAYQ 358 (519)
Q Consensus 289 ~l--~GprgG~i~~---~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~-----~~~~~~~~~ 358 (519)
++ +|.|.|++++ +++.. ..+...+....... .++++....+++..+++.. .....++..
T Consensus 244 ~~~~~G~riG~~~~~~~~~~~~----------~~l~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~ 312 (394)
T 2ay1_A 244 NFGIYRERTGCLLALCADAATR----------ELAQGAMAFLNRQT-YSFPPFHGAKIVSTVLTTPELRADWMAELEAVR 312 (394)
T ss_dssp TTTCGGGCEEEEEEECSSHHHH----------HHHHHHHHHHHHTT-TSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CCcCcCCccceEEEEeCCHHHH----------HHHHHHHHHHHhhh-cCCCChHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 87 4677799987 33210 01222222111111 2333444444445555432 012467788
Q ss_pred HHHHHHHHHHHHHHHhcC----CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEec
Q 010058 359 EQVLSNSSKFARSLLERG----YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMG 434 (519)
Q Consensus 359 ~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~ 434 (519)
+++.++++++.+.|++.| +.+..+. ...+.++.+ +...+.+.|.++||.+. | ++||+
T Consensus 313 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~-----~~~~~~~~l~~~gi~v~----~---------~~Ris 373 (394)
T 2ay1_A 313 SGMLRLREQLAGELRDLSGSDRFGFVAEH-RGMFSRLGA-----TPEQVKRIKEEFGIYMV----G---------DSRIN 373 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSTTTHHHHC-CSSEEECCC-----CHHHHHHHHHHHCEECC----T---------TCEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeeEEcCC-ceEEEeeCC-----CHHHHHHHHHhCCEEec----C---------CCeEE
Confidence 889999999999998875 5554432 234445443 34567788888999985 2 37999
Q ss_pred cCccccCCCCHHHHHHHHHHHHHH
Q 010058 435 TPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 435 ~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
++ .++ ++|++++++.|+++
T Consensus 374 ~~-~~~----~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 374 IA-GLN----DNTIPILARAIIEV 392 (394)
T ss_dssp GG-GCC----TTTHHHHHHHHHHH
T ss_pred ee-cCC----HhhHHHHHHHHHHc
Confidence 77 345 79999999998765
No 184
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.87 E-value=4e-20 Score=191.16 Aligned_cols=300 Identities=14% Similarity=0.134 Sum_probs=186.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+...+++ +++++++|.+. .+++.+|+.|+..++.++++|||+|+++++.|++........ +...|..
T Consensus 56 ~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~ 122 (412)
T 2cb1_A 56 PTAKALE----ERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQV----LSLMGVT 122 (412)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHT----TTTTTCE
T ss_pred hHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHH----HHHcCCE
Confidence 4455555 88889999762 255555555999899999999999999998887654432110 1112333
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ +|++++++++++ ++++|+++ ++| +|...|+++|+++|+++|+++|+|++|..+.... .+
T Consensus 123 ~~~~~---------~~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~ 188 (412)
T 2cb1_A 123 VRYVD---------PEPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALC----RP 188 (412)
T ss_dssp EEEEC---------SSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSC----CG
T ss_pred EEEEC---------CCHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccC----Cc
Confidence 33332 248999999987 89999988 666 8899999999999999999999999998762211 11
Q ss_pred CC-CCeEEEEcCCCcccCCCc--ceEEeec-ccc------cc-c-ccCcch-----hhhHHHHhhhcccCCCCCC-ccHH
Q 010058 276 FE-YADVVTTTTHKSLRGPRG--AMIFFRK-GVK------EI-N-KQGQEV-----MYAYEDKINQAVFPGLQGG-PHNH 337 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gprg--G~i~~~~-~~~------~~-~-~~g~~~-----~~~~~~~i~~~~~~~~~g~-~~~~ 337 (519)
+. ++|++++|+||++.||.+ |++++.+ ... +. | ..|... ..++.+.+....... .|. ....
T Consensus 189 ~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~-~g~~~~~~ 267 (412)
T 2cb1_A 189 LAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSL-CGMALSPF 267 (412)
T ss_dssp GGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTT-TCCCCCHH
T ss_pred cccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHh-cCCCCChH
Confidence 11 689999999999987654 6555544 321 11 1 112110 002223222221111 121 1111
Q ss_pred HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEe-cCCCC-------------cceeeeeccCCCCcHHH
Q 010058 338 TISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLV-SGGTE-------------NHLVLVNLRNKGIDGSR 402 (519)
Q Consensus 338 ~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~-------------~~~~~v~~~~~~~~~~~ 402 (519)
. + +.++..+ ..+....++..++++++.+.|.+. ++..+ .++.. ..-.++.+.. + +...
T Consensus 268 ~-a--~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-~~~~ 340 (412)
T 2cb1_A 268 N-A--YLLFQGL--ETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-DLER 340 (412)
T ss_dssp H-H--HHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-SHHH
T ss_pred H-h--HHHHcCC--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-CHHH
Confidence 1 1 1122222 235566777788999999999987 77755 23211 1122333333 4 6778
Q ss_pred HHHhhcccCeEEcccc---------cCCCCC------------CCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 403 VEKVLESVHIAANKNT---------VPGDVS------------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 403 ~~~~L~~~gI~v~~~~---------~p~~~~------------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
+.+.|++.||.+ ..+ .|.... ...++.||+|++..++ +++++.+.++|++
T Consensus 341 ~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~----~~~i~~l~~al~~ 411 (412)
T 2cb1_A 341 ASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDP----LDLLALFEEALEA 411 (412)
T ss_dssp HHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCH----HHHHHHHHHHHHC
T ss_pred HHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCH----HHHHHHHHHHHhh
Confidence 888998899988 542 121110 0116789999999998 8999999988864
No 185
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.87 E-value=1.2e-20 Score=196.76 Aligned_cols=327 Identities=15% Similarity=0.170 Sum_probs=202.1
Q ss_pred cCeeecCCCCC-----CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en~-----~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++.++.+. .+|.|.+|+.+.+.. + ++.. +.|. .+...+++ +++++++|.+ .|.+++|
T Consensus 77 ~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~-~--~~~~-~~~~-~~~~~~l~----~~la~~~g~~------~v~~~~s 141 (439)
T 2oat_A 77 KYFDFLSSYSAVNQGHCHPKIVNALKSQVDK-L--TLTS-RAFY-NNVLGEYE----EYITKLFNYH------KVLPMNT 141 (439)
T ss_dssp EEEESSGGGGTTTTCBTCHHHHHHHHHHHTT-C--SCCC-TTSE-ESSHHHHH----HHHHHHHTCS------EEEEESS
T ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHHh-c--Cccc-CccC-CHHHHHHH----HHHHHhcCCC------EEEEeCC
Confidence 34677664332 679999999998865 2 1111 1221 23344444 7777778743 3655555
Q ss_pred -HHHHHHHHHhhc---------CCC-CEEEEecCCCcccccccccccCCc-----eeeeeeeeEEEeeeeCCCCCCCCHH
Q 010058 152 -SPANFQVYTALL---------KPH-ERIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFFETMPYRLDESTGYIDYE 215 (519)
Q Consensus 152 -s~a~~~~~~all---------~pG-D~Vl~~~~~~~~~~~~~~~~~~~~-----v~~~g~~~~~v~~~~d~~~~~iD~d 215 (519)
+.|+..++.++. .|| |+|++++..+.+............ ..-....+..+++ .|++
T Consensus 142 GseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~--------~d~~ 213 (439)
T 2oat_A 142 GVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY--------NDLP 213 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS--------SCHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC--------CCHH
Confidence 459888887764 467 999998866544321111000000 0000011222221 3899
Q ss_pred HHHHHhhhhCCcEEEEcccc--ccccc----cHHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcC
Q 010058 216 QLEKSAALFRPKLIVAGASA--YARLY----DYARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTT 286 (519)
Q Consensus 216 ~l~~~i~~~k~klIi~~~sn--~g~~~----d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~ 286 (519)
+++++++..++++|++.+.+ +|... ++++|+++|++||++||+|++| .|+...+.. . ..++ ..|++++
T Consensus 214 ~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~g~~g~~~~~~~~~~~~Di~t~-- 290 (439)
T 2oat_A 214 ALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIVLL-- 290 (439)
T ss_dssp HHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEEEE--
T ss_pred HHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCcchhHHHhCCCCcEEEe--
Confidence 99999953378888887543 56555 7999999999999999999998 454322210 0 0011 4688755
Q ss_pred CCcccC--CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHH
Q 010058 287 HKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSN 364 (519)
Q Consensus 287 ~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~ 364 (519)
+|+++| .++|++++++ ++.+.+......... +.+....++..++++.+.. +.+.+++.++
T Consensus 291 sK~l~~G~~~~G~v~~~~--------------~~~~~l~~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~ 352 (439)
T 2oat_A 291 GKALSGGLYPVSAVLCDD--------------DIMLTIKPGEHGSTY-GGNPLGCRVAIAALEVLEE---ENLAENADKL 352 (439)
T ss_dssp CGGGGTTSSCCEEEEECH--------------HHHTTSCTTSSCCSS-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHH
T ss_pred cccccCCCCCeEEEEECH--------------HHHhccCCCCcccCC-CcCHHHHHHHHHHHHHHhh---hhHHHHHHHH
Confidence 598865 4789999987 555544332122222 2344455555566765532 2467888999
Q ss_pred HHHHHHHHHhcCCEEecC-CCCcceeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCC
Q 010058 365 SSKFARSLLERGYDLVSG-GTENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 442 (519)
Q Consensus 365 ~~~l~~~L~~~g~~~~~~-~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg 442 (519)
++++.+.|++++++++.. .....++++.+... +.+..++.+.|.+.||.++ |+ ..+.+|++++..++
T Consensus 353 ~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~----~~-----~~~~iRi~~~~~~t-- 421 (439)
T 2oat_A 353 GIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAK----PT-----HGDIIRFAPPLVIK-- 421 (439)
T ss_dssp HHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECC----BS-----SSSEEEECCCTTCC--
T ss_pred HHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEe----cC-----CCCEEEEECccCCC--
Confidence 999999998876543211 11234556665432 1356778888888999996 32 24689999887777
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 010058 443 FVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 443 ~~~~di~~l~~~l~~~l~ 460 (519)
++|++++++.|.+++.
T Consensus 422 --~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 422 --EDELRESIEIINKTIL 437 (439)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHH
Confidence 8999999999998875
No 186
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.86 E-value=4.7e-20 Score=189.77 Aligned_cols=317 Identities=15% Similarity=0.135 Sum_probs=203.0
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcC--
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLK-- 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~-- 164 (519)
.+|.+.+++.+.+.... .+ + ..|. .+... ..++++++++|.+ +|++++|++ |+..++.+++.
T Consensus 56 ~~p~v~~a~~~~~~~~~--~~-~-~~~~-~~~~~----~l~~~la~~~~~~------~v~~~~gg~~a~~~al~~~~~~~ 120 (406)
T 4adb_A 56 AHPELREALNEQASKFW--HT-G-NGYT-NEPVL----RLAKKLIDATFAD------RVFFCNSGAEANEAALKLARKFA 120 (406)
T ss_dssp TCHHHHHHHHHHHTTCS--CC-C-TTSC-CHHHH----HHHHHHHHHSSCS------EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--cc-c-CCcC-CHHHH----HHHHHHHhhCCCC------eEEEeCcHHHHHHHHHHHHHHHH
Confidence 48899999998876522 11 1 1222 23333 3448888999865 266666665 88888888765
Q ss_pred -----CC-CEEEEecCCCcccccccccccCCce-----eeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEcc
Q 010058 165 -----PH-ERIMALDLPHGGHLSHGYQTDTKKI-----SAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGA 233 (519)
Q Consensus 165 -----pG-D~Vl~~~~~~~~~~~~~~~~~~~~v-----~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~~ 233 (519)
+| |+|++.++.+.+............. .-.+..+..++ ..|++++++++++ ++++|+++|
T Consensus 121 ~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~~~v~~~p 191 (406)
T 4adb_A 121 HDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAA--------YNDINSASALIDD-STCAVIVEP 191 (406)
T ss_dssp HHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEEC--------TTCHHHHHTTCST-TEEEEEECS
T ss_pred HhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeC--------CCcHHHHHHHhcC-CeEEEEEeC
Confidence 66 9999998777655322111111000 00001111111 1489999998885 899999996
Q ss_pred cc-cccc-----ccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCCccc-CCCcceEEeecc
Q 010058 234 SA-YARL-----YDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSLR-GPRGAMIFFRKG 303 (519)
Q Consensus 234 sn-~g~~-----~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K~l~-GprgG~i~~~~~ 303 (519)
+| +|.. .++++|+++|++||++||+|++|. |+...+... ..++ ..|++++ ||+++ |.|+|++++++
T Consensus 192 ~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~~~- 267 (406)
T 4adb_A 192 IQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLTT--AKALGGGFPVGALLATE- 267 (406)
T ss_dssp EETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECH-
T ss_pred CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEEe--chhhcCCCCeEEEEEcH-
Confidence 66 5543 468999999999999999999986 442222110 0001 4578866 68874 56789999988
Q ss_pred cccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC--CEEec
Q 010058 304 VKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG--YDLVS 381 (519)
Q Consensus 304 ~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~ 381 (519)
++.+.+....... ..+.+....++..++++.+.. +++.++++++++++.+.|++.+ +..+.
T Consensus 268 -------------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 330 (406)
T 4adb_A 268 -------------ECARVMTVGTHGT-TYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFS 330 (406)
T ss_dssp -------------HHHHTCCTTSSCC-SSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred -------------HHHhhhccCCcCC-CCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 5655544332222 234455666666677776644 5678888999999999988763 11111
Q ss_pred C-CCCcceeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 382 G-GTENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 382 ~-~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
. .....++++.+... ..+..++.+.|.+.||.++ |+ ..+.+|++++..++ ++|++++++.|.+++
T Consensus 331 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~----~~-----~~~~iRi~~~~~~~----~e~i~~~~~~l~~~l 397 (406)
T 4adb_A 331 EVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVL----IA-----GGNVVRFAPALNVS----EEEVTTGLDRFAAAC 397 (406)
T ss_dssp EEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECE----ES-----STTEEEECCCTTCC----HHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEe----ec-----CCCeEEEECCCCCC----HHHHHHHHHHHHHHH
Confidence 1 11234555555331 1257788888888899997 32 25789999887777 899999999999998
Q ss_pred HHH
Q 010058 460 KLA 462 (519)
Q Consensus 460 ~~~ 462 (519)
+..
T Consensus 398 ~~~ 400 (406)
T 4adb_A 398 EHF 400 (406)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 187
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.86 E-value=3.8e-20 Score=192.56 Aligned_cols=323 Identities=15% Similarity=0.144 Sum_probs=197.0
Q ss_pred cCeeecCCC--CC---CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSE--NF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~e--n~---~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++.++. +. .+|.|.+|+.+.+.+ + ++.. +.| ..+...+++ +++++++|.+ +|++++|
T Consensus 66 ~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~-~--~~~~-~~~-~~~~~~~l~----~~la~~~g~~------~v~~~~s 130 (433)
T 1z7d_A 66 RYYDFLSAYSSVNQGHCHPNILNAMINQAKN-L--TICS-RAF-FSVPLGICE----RYLTNLLGYD------KVLMMNT 130 (433)
T ss_dssp EEEESSHHHHTTTTCBTCHHHHHHHHHHHTT-C--SCCC-TTS-EEHHHHHHH----HHHHHHHTCS------EEEEESS
T ss_pred EEEEcccchhhcccCCCCHHHHHHHHHHHHh-C--CCcc-CCc-CCHHHHHHH----HHHHhhcCCC------eEEEeCC
Confidence 346665532 22 679999999988865 2 1211 122 123333343 7777888753 3555555
Q ss_pred H-HHHHHHHHhhc---------CCC-CEEEEecCCCcccccccccccCCceeeeeee----------eEEEeeeeCCCCC
Q 010058 152 S-PANFQVYTALL---------KPH-ERIMALDLPHGGHLSHGYQTDTKKISAVSIF----------FETMPYRLDESTG 210 (519)
Q Consensus 152 s-~a~~~~~~all---------~pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~----------~~~v~~~~d~~~~ 210 (519)
+ .|+..++.++. .|| |+|++++..+.+..... +.+.|.. ...+.++
T Consensus 131 GseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~-------~~~~g~~~~~~~~~p~~~~v~~~~------ 197 (433)
T 1z7d_A 131 GAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGC-------ISASTTKKCTSNFGPFAPQFSKVP------ 197 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------------CEEEEC------
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhh-------hcccCCccccccCCCCCCCeEEeC------
Confidence 5 58888877653 578 99999986654432211 1111100 0111111
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcccc--ccccc----cHHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeE
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASA--YARLY----DYARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADV 281 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn--~g~~~----d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di 281 (519)
..|+++++++++..++++|++++.+ +|... ++++|+++|++||++||+|++|. |+...+.. . ..++ ..|+
T Consensus 198 ~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di 276 (433)
T 1z7d_A 198 YDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDV 276 (433)
T ss_dssp TTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSE
T ss_pred CCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCE
Confidence 1389999999943378888888543 56544 79999999999999999999985 54322210 0 0011 4688
Q ss_pred EEEcCCCcccC--CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHH
Q 010058 282 VTTTTHKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE 359 (519)
Q Consensus 282 ~~~S~~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~ 359 (519)
+++| |+++| .++|++++++ ++.+.+......... +.+....++..++++.+.+ +.+.+
T Consensus 277 ~t~s--K~l~~G~~~~G~v~~~~--------------~~~~~l~~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~ 336 (433)
T 1z7d_A 277 ILLG--KALSGGHYPISAVLAND--------------DIMLVIKPGEHGSTY-GGNPLAASICVEALNVLIN---EKLCE 336 (433)
T ss_dssp EEEC--GGGGTTSSCCEEEEECH--------------HHHTTCCTTCCCCTT-TTCHHHHHHHHHHHHHHHH---TTHHH
T ss_pred EEEC--ccccCCCCCeEEEEECH--------------HHHhhhccccccccC-CCCHHHHHHHHHHHHHHHh---ccHHH
Confidence 7554 98864 4789999987 555544332112222 3344555555566765532 24677
Q ss_pred HHHHHHHHHHHHHHhc--CCEEecC-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccC
Q 010058 360 QVLSNSSKFARSLLER--GYDLVSG-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTP 436 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~ 436 (519)
++.++++++.+.|+++ +++.+.. .....++++.+.....+..++.+.|.+.||.++ |+ ..+.+|++++
T Consensus 337 ~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~----~~-----~~~~iRi~~~ 407 (433)
T 1z7d_A 337 NAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITR----DV-----HDKTIRLTPP 407 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECC----EE-----TTTEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEe----cC-----CCCEEEEECC
Confidence 8888999999999876 5532211 112345666664321356778888888999986 32 2468999988
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 437 ALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 437 ~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
..++ ++|++++++.|.++++.
T Consensus 408 ~~~t----~e~i~~~l~~l~~~l~~ 428 (433)
T 1z7d_A 408 LCIT----KEQLDECTEIIVKTVKF 428 (433)
T ss_dssp TTCC----HHHHHHHHHHHHHHHHH
T ss_pred cCCC----HHHHHHHHHHHHHHHHH
Confidence 7777 89999999999998864
No 188
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.86 E-value=1.4e-20 Score=194.89 Aligned_cols=328 Identities=16% Similarity=0.085 Sum_probs=200.8
Q ss_pred cCeeecCCC--CCC----cHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCC-CCCCcceEEeC
Q 010058 77 KGLELIPSE--NFT----SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLD-PAKWGVNVQSL 149 (519)
Q Consensus 77 ~~i~L~a~e--n~~----~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~-~~~~~~~V~~~ 149 (519)
..|++.++. +++ +|.|.+|+.+.+.... .+... .|. .+ .....++++++++|++ ++ +|.++
T Consensus 43 ~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~-~~~-~~----~~~~l~~~la~~~~~~~~~----~v~~~ 110 (419)
T 2eo5_A 43 KYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAAN-DFY-NI----PQLELAKKLVTYSPGNFQK----KVFFS 110 (419)
T ss_dssp EEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCS-CSC-CH----HHHHHHHHHHHHSSCSSCE----EEEEE
T ss_pred EEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--ccccc-ccC-CH----HHHHHHHHHHHhCCCCcCC----EEEEe
Confidence 346776655 333 7999999999886521 11111 122 12 2233447888999987 43 58888
Q ss_pred CcHH-HHHHHHHhhcC-CCCEEEEecCCCcccccccccc------cCCceeeeeeeeEEEeeeeCCCCCC----------
Q 010058 150 SGSP-ANFQVYTALLK-PHERIMALDLPHGGHLSHGYQT------DTKKISAVSIFFETMPYRLDESTGY---------- 211 (519)
Q Consensus 150 sGs~-a~~~~~~all~-pGD~Vl~~~~~~~~~~~~~~~~------~~~~v~~~g~~~~~v~~~~d~~~~~---------- 211 (519)
+|++ |+..++.++.. +||+|+++++.+.+........ ...........+..++++ +.+.
T Consensus 111 ~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~g~~~~~~ 187 (419)
T 2eo5_A 111 NSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYP---NPYRNPWHINGYEN 187 (419)
T ss_dssp SSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCC---CSSSCTTCCCTTTC
T ss_pred CchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCC---cccccccccccccc
Confidence 8877 88888877644 4999999987654332111000 000010001123344432 1221
Q ss_pred ------CCHHHHH-HHhhh----hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C
Q 010058 212 ------IDYEQLE-KSAAL----FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P 273 (519)
Q Consensus 212 ------iD~d~l~-~~i~~----~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~ 273 (519)
+|+++++ +++++ .++++|++++.| +|...+ +++|+++|++||++||+|++|. ++...+.. .
T Consensus 188 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-~~g~~g~~~~ 266 (419)
T 2eo5_A 188 PSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQM-GLGRTGKLFA 266 (419)
T ss_dssp HHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSG
T ss_pred chhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCcchhh
Confidence 4789999 88874 366788887654 575555 9999999999999999999986 22111110 0
Q ss_pred CC-CC-CCeEEEEcCCCccc-C-CCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh
Q 010058 274 SP-FE-YADVVTTTTHKSLR-G-PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV 349 (519)
Q Consensus 274 ~p-~~-~~di~~~S~~K~l~-G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~ 349 (519)
.. +. ..|++++| |+++ | .|.|++++++ ++. .+ .....+ ..+.+...+++..++++..
T Consensus 267 ~~~~~~~~d~~t~s--K~~~~G~~riG~~~~~~--------------~~~-~~-~~~~~~-t~~~n~~~~~aa~aal~~~ 327 (419)
T 2eo5_A 267 IENFNTVPDVITLA--KALGGGIMPIGATIFRK--------------DLD-FK-PGMHSN-TFGGNALACAIGSKVIDIV 327 (419)
T ss_dssp GGGGTCCCSEEEEC--GGGGTTTSCCEEEEEEG--------------GGC-CC--------CCCCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEec--ccccCCccceEEEEEch--------------Hhh-cC-CcccCC-CCCCCHHHHHHHHHHHHHH
Confidence 00 01 45777655 8775 4 6779999988 333 33 111111 1233556666666677653
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCC
Q 010058 350 KTPEYKAYQEQVLSNSSKFARSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPG 429 (519)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 429 (519)
. +..+++.+++++|.+.|.++ +..+.+ ...+.++++.+...... +.+.|.+.||.++ |+. .+
T Consensus 328 ~-----~~~~~~~~~~~~l~~~L~~~-~~~~~~--~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~----~~~-----~~ 389 (419)
T 2eo5_A 328 K-----DLLPHVNEIGKIFAEELQGL-ADDVRG--IGLAWGLEYNEKKVRDR-IIGESFKRGLLLL----PAG-----RS 389 (419)
T ss_dssp H-----HHHHHHHHHHHHHHHHHTTS-SSEEEE--ETTEEEEECSCHHHHHH-HHHHHHHTTEECE----EET-----TT
T ss_pred H-----HHHHHHHHHHHHHHHHHHHh-hhheEe--eeEEEEEEEecCccHHH-HHHHHHHCCCEEe----cCC-----CC
Confidence 2 27788899999999999886 333322 23455666632111244 7777778999997 321 46
Q ss_pred eEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 430 GIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 430 ~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+||+++..++ ++|++++++.|++++..
T Consensus 390 ~lRis~~~~~t----~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 390 AIRVIPPLVIS----EEEAKQGLDILKKVIKV 417 (419)
T ss_dssp EEEECCCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCC----HHHHHHHHHHHHHHHHh
Confidence 89999887778 89999999999988753
No 189
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.86 E-value=1.5e-20 Score=194.81 Aligned_cols=331 Identities=12% Similarity=0.032 Sum_probs=203.8
Q ss_pred CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHH---hh
Q 010058 87 FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYT---AL 162 (519)
Q Consensus 87 ~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~---al 162 (519)
+.+|.|.+++.+.+.+ + ++.... |...+...+++ +.++++++.+.. .+|.+++|++ |+..++. ++
T Consensus 57 ~~~~~v~~a~~~~~~~-~--~~~~~~-~~~~~~~~~l~----~~la~~~~~~~~---~~v~~~~g~~~a~~~~~~~a~~~ 125 (426)
T 1sff_A 57 HLHPKVVAAVEAQLKK-L--SHTCFQ-VLAYEPYLELC----EIMNQKVPGDFA---KKTLLVTTGSEAVENAVKIARAA 125 (426)
T ss_dssp BTCHHHHHHHHHHTTT-C--SCCCTT-TEECHHHHHHH----HHHHHHSSCSSC---EEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-C--CCcccc-ccCCHHHHHHH----HHHHHhCCcccc---cEEEEeCchHHHHHHHHHHHHHh
Confidence 3688999999988765 2 222112 22334455555 778888832221 2588888877 8887777 67
Q ss_pred cCCCCEEEEecCCCccccccccc-ccC-----CceeeeeeeeEEEeeeeC--CCCCCCCHHHHHHHhhh----hCCcEEE
Q 010058 163 LKPHERIMALDLPHGGHLSHGYQ-TDT-----KKISAVSIFFETMPYRLD--ESTGYIDYEQLEKSAAL----FRPKLIV 230 (519)
Q Consensus 163 l~pGD~Vl~~~~~~~~~~~~~~~-~~~-----~~v~~~g~~~~~v~~~~d--~~~~~iD~d~l~~~i~~----~k~klIi 230 (519)
.++| +|++.++.+.+....... ... .........+..++++.+ .+++.+|++++++++++ .++++|+
T Consensus 126 ~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~ 204 (426)
T 1sff_A 126 TKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIV 204 (426)
T ss_dssp HTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred hCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEE
Confidence 7887 888888766443321110 000 000000001334444321 11345799999999874 3678888
Q ss_pred Ecc--cccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCccc-CCCcceEEe
Q 010058 231 AGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSLR-GPRGAMIFF 300 (519)
Q Consensus 231 ~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l~-GprgG~i~~ 300 (519)
+++ +|+|...+ +++|+++|++||++||+|++|. |+...+.. . ...+ .+|++++ +|+++ |.|.|++++
T Consensus 205 ~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~s~--sK~~~~GlriG~~~~ 281 (426)
T 1sff_A 205 IEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLTTF--AKSIAGGFPLAGVTG 281 (426)
T ss_dssp ECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEEEE--CGGGGTSSCCEEEEE
T ss_pred EecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEEEE--cccccCCCceEEEEE
Confidence 863 45786666 9999999999999999999987 54332210 0 0011 3677755 59875 456699999
Q ss_pred ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhcC--CE
Q 010058 301 RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLERG--YD 378 (519)
Q Consensus 301 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~ 378 (519)
++ ++.+.+....... ..+.+....+++.++++.+.. +.+.+++.++++.+.+.|.+++ +.
T Consensus 282 ~~--------------~~~~~l~~~~~~~-~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~ 343 (426)
T 1sff_A 282 RA--------------EVMDAVAPGGLGG-TYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHP 343 (426)
T ss_dssp EH--------------HHHTTSCTTSBCC-SSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cH--------------HHHhhhccCCcCc-CCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 88 5555443211111 223455566666677776543 2456778888888888887742 32
Q ss_pred EecC-CCCcceeeeeccC-------CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHH
Q 010058 379 LVSG-GTENHLVLVNLRN-------KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEK 450 (519)
Q Consensus 379 ~~~~-~~~~~~~~v~~~~-------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~ 450 (519)
.+.. .....++++.+.. .+.+..++.+.|.+.||.+. |+.. .++++||+++..++ ++|+++
T Consensus 344 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~----~~~~---~~~~iRi~~~~~~~----~~~i~~ 412 (426)
T 1sff_A 344 EIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILL----SCGP---YYNVLRILVPLTIE----DAQIRQ 412 (426)
T ss_dssp TEEEEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECE----EEST---TSCEEEECCCTTCC----HHHHHH
T ss_pred CeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEe----cCCC---CCCEEEEECCccCC----HHHHHH
Confidence 1110 0124566777642 12345667777878899997 4432 25789999887777 899999
Q ss_pred HHHHHHHHHHH
Q 010058 451 VAEFFDAAVKL 461 (519)
Q Consensus 451 l~~~l~~~l~~ 461 (519)
+++.|.+++..
T Consensus 413 ~~~~l~~~l~~ 423 (426)
T 1sff_A 413 GLEIISQCFDE 423 (426)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 190
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.86 E-value=2.6e-20 Score=190.70 Aligned_cols=289 Identities=17% Similarity=0.115 Sum_probs=188.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+...+++ +.+++++|.+. .|.++||+.|+..++.+++++||+|++.++.|.+........ ....|..
T Consensus 52 ~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~----~~~~g~~ 118 (386)
T 1cs1_A 52 PTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSL----AKRGCYR 118 (386)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHH----HTTTSCE
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHH----HHhcCCE
Confidence 3344454 88888898862 588999977998899999999999999998887644322100 0112333
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ . .|++++++.+++ ++++|+++ ++| +|...|+++|+++|+++|+++|+|++|..+...... ..
T Consensus 119 ~~~~~--~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~- 187 (386)
T 1cs1_A 119 VLFVD--Q------GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-AL- 187 (386)
T ss_dssp EEEEC--T------TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GG-
T ss_pred EEEeC--C------CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cc-
Confidence 33332 2 289999999987 89999998 555 788999999999999999999999998766543211 11
Q ss_pred CCCCeEEEEcCCCcccCCCc---ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCH
Q 010058 276 FEYADVVTTTTHKSLRGPRG---AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTP 352 (519)
Q Consensus 276 ~~~~di~~~S~~K~l~Gprg---G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~ 352 (519)
++|++++|+||+++||.+ |+++++++ ++.+.+....... .++.+....++...+++
T Consensus 188 --~~di~~~s~sK~~~~~~~~~~G~~~~~~~-------------~l~~~l~~~~~~~-~~~~~~~~~~~~~~~l~----- 246 (386)
T 1cs1_A 188 --GADLVLHSCTKYLNGHSDVVAGVVIAKDP-------------DVVTELAWWANNI-GVTGGAFDSYLLLRGLR----- 246 (386)
T ss_dssp --TCSEEEEETTTTTTCSSCCCCEEEEESSH-------------HHHHHHHHHHHHH-TCBCCHHHHHHHHHHHT-----
T ss_pred --CceEEEEcCcccccCCCCceeEEEEeCcH-------------HHHHHHHHHHHhc-CCCCCHHHHHHHHhccc-----
Confidence 589999999999876653 99999863 3334333222111 12233333222222332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC-CEEe-cCC---------------CCcceeeeeccCCCCcHHHHHHhhcccCeEEc
Q 010058 353 EYKAYQEQVLSNSSKFARSLLERG-YDLV-SGG---------------TENHLVLVNLRNKGIDGSRVEKVLESVHIAAN 415 (519)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~L~~~g-~~~~-~~~---------------~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~ 415 (519)
.+....++..++++.+.+.|++++ +.-+ .+. ....++.+.+. + ....+.+.|.+.||.++
T Consensus 247 ~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~l~~~gi~~~ 323 (386)
T 1cs1_A 247 TLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD--G-DEQTLRRFLGGLSLFTL 323 (386)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--S-CHHHHHHHHHTCSSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEEC--C-CHHHHHHHHHhCCcceE
Confidence 245566778888999999888763 3221 111 01234444443 2 25678888888999886
Q ss_pred cccc---------CC--CC--C--------CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 416 KNTV---------PG--DV--S--------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 416 ~~~~---------p~--~~--~--------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
.... |. .. . ...++.||++++..++ +++++.+.++|+++
T Consensus 324 ~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~----~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 324 AESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDG----EDLIADLENGFRAA 383 (386)
T ss_dssp BSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCH----HHHHHHHHHHHHHH
T ss_pred cccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCH----HHHHHHHHHHHHHh
Confidence 3110 00 00 0 0124789999998776 88888888887764
No 191
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.86 E-value=2.2e-20 Score=192.62 Aligned_cols=287 Identities=15% Similarity=0.131 Sum_probs=188.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
....+++ +++++++|.+. .|.+++|+.|+..++.++++|||+|+++++.|+++..++.. .+...|..
T Consensus 62 ~~~~~l~----~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~----~~~~~g~~ 128 (404)
T 1e5e_A 62 PTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEH----ALTKFGIQ 128 (404)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHT----HHHHTTCE
T ss_pred hHHHHHH----HHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHH----HHHHcCCE
Confidence 4444555 78888888862 47888887788889999999999999999888776543210 01223444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhh-cCCEEEehhhhhhhccccCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDK-QKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~-~~~~livD~ah~~g~~~~~~~~~ 274 (519)
+..++ .+ |++++++++++ +|++|+++ ++| +|...|+++|.++|++ +|+++|+|++|..+....
T Consensus 129 ~~~v~--~~------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~----- 194 (404)
T 1e5e_A 129 VDFIN--TA------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITN----- 194 (404)
T ss_dssp EEEEC--TT------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCC-----
T ss_pred EEEEC--CC------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCC-----
Confidence 44443 22 78899999987 89999998 667 8999999999999999 999999999988665321
Q ss_pred CCC-CCeEEEEcCCCcccCC--C-cceEEeecccccccccCcchhhhHHH-HhhhcccCCCCCCccHHHHHHHHHHHHHh
Q 010058 275 PFE-YADVVTTTTHKSLRGP--R-GAMIFFRKGVKEINKQGQEVMYAYED-KINQAVFPGLQGGPHNHTISGLAVALKQV 349 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gp--r-gG~i~~~~~~~~~~~~g~~~~~~~~~-~i~~~~~~~~~g~~~~~~iaal~~al~~~ 349 (519)
|+. ++|+++.|+||++++| | +|++++++ ++.+ .+.........++.+.....+...+++.
T Consensus 195 ~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~--------------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~- 259 (404)
T 1e5e_A 195 PVDFGVDVVVHSATKYINGHTDVVAGLICGKA--------------DLLQQIRMVGIKDITGSVISPHDAWLITRGLST- 259 (404)
T ss_dssp GGGGTCSEEEEETTTTTTCSSCCCCEEEEECH--------------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-
T ss_pred ccccCCEEEEEcCccccCCCCCCeEEEEEECH--------------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-
Confidence 222 6899999999998755 4 49999988 4444 5544322210123343333333334432
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHHhcC-CE-EecCC---------------CCcceeeeeccCCCCcHHHHHHhhcccCe
Q 010058 350 KTPEYKAYQEQVLSNSSKFARSLLERG-YD-LVSGG---------------TENHLVLVNLRNKGIDGSRVEKVLESVHI 412 (519)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-~~~~~---------------~~~~~~~v~~~~~~~~~~~~~~~L~~~gI 412 (519)
.....++..++++.+.+.|++.. +. +..++ ....++.+++.. ....+.+.|++.||
T Consensus 260 ----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~~i 332 (404)
T 1e5e_A 260 ----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS---GFEGAKKLLDNLKL 332 (404)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT---HHHHHHHHHHTCSS
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC---CHHHHHHHHHhCCC
Confidence 44556677888888888888763 21 11111 013344555532 13457778888898
Q ss_pred EEcccccCCC-------C-C------------CCC--CCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 413 AANKNTVPGD-------V-S------------AMV--PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 413 ~v~~~~~p~~-------~-~------------~~~--~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.+..... |. . . ..+ ++.|||+++. +|++.+++.|++++...
T Consensus 333 ~~~~~s~-G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~--------e~~~~li~~l~~al~~~ 395 (404)
T 1e5e_A 333 ITLAVSL-GGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--------EDADELIADFKQGLDAL 395 (404)
T ss_dssp SEESSCC-CSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--------SCHHHHHHHHHHHHHHH
T ss_pred ceeccCC-CCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC--------CCHHHHHHHHHHHHHHH
Confidence 5432111 11 0 0 011 5789999764 67888888888887654
No 192
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.86 E-value=1e-19 Score=189.09 Aligned_cols=342 Identities=14% Similarity=0.102 Sum_probs=191.1
Q ss_pred CeeecCC--CCC---CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPS--ENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~--en~---~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.|++.++ .++ .+|.|.+++.+.+.+ .. .+...+ | .+......++++++.++.+.+ +|++++|+
T Consensus 31 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~-~~~~~~-~-----~~~~~~~l~~~la~~~~~~~~----~v~~~~gg 98 (430)
T 3i4j_A 31 YLDGSSGALVANIGHGRAEVGERMAAQAAR-LP-FVHGSQ-F-----SSDVLEEYAGRLARFVGLPTF----RFWAVSGG 98 (430)
T ss_dssp EEETTHHHHTCTTCBCCHHHHHHHHHHHHH-CC-CCCTTT-C-----EEHHHHHHHHHHHHHTTCTTC----EEEEESSH
T ss_pred EEECCCchhccccCCCCHHHHHHHHHHHHh-cc-cccccc-c-----CCHHHHHHHHHHHHhCCCCCC----EEEEeCcH
Confidence 4566543 232 389999999988765 21 111111 1 123334445888899988764 47888776
Q ss_pred H-HHHHHHHhhc--------CCCCEEEEecCCCcccccccccccCCcee---eee--e--eeEEEeeeeCCCCCCCCHHH
Q 010058 153 P-ANFQVYTALL--------KPHERIMALDLPHGGHLSHGYQTDTKKIS---AVS--I--FFETMPYRLDESTGYIDYEQ 216 (519)
Q Consensus 153 ~-a~~~~~~all--------~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~---~~g--~--~~~~v~~~~d~~~~~iD~d~ 216 (519)
+ |+..++.+++ .+||+|++.+..+.+.............. ... . .+..++++.....+..|+++
T Consensus 99 ~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
T 3i4j_A 99 SEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEG 178 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHH
Confidence 6 9888888876 45889999887664433211100000000 000 0 11122211000002346789
Q ss_pred HHHHhhh---hCCcEEEEcccc---cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCC-C-CCeEE
Q 010058 217 LEKSAAL---FRPKLIVAGASA---YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPF-E-YADVV 282 (519)
Q Consensus 217 l~~~i~~---~k~klIi~~~sn---~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~-~-~~di~ 282 (519)
|++++++ .++++|++++.| .|...+ +++|+++|++||++||+|++|. |+...+... ..+ + ..|++
T Consensus 179 le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~~~~g~~~~~~~~~~~~~di~ 257 (430)
T 3i4j_A 179 LRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMS-GMGRCGSPLALSRWSGVTPDIA 257 (430)
T ss_dssp HHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTTCCCSEE
T ss_pred HHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhhhhcCCCCcEE
Confidence 9998874 356777777543 333444 8999999999999999999975 222211100 001 1 35788
Q ss_pred EEcCCCccc-C-CCcceEEeecccccccccCcchhhhHHHHhhhc---ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 283 TTTTHKSLR-G-PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA---VFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 283 ~~S~~K~l~-G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~---~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
++| |+++ | +|.|++++++ ++.+.+... ...+...+.+....++..++++.... +.+
T Consensus 258 t~s--K~l~~G~~r~G~~~~~~--------------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~ 318 (430)
T 3i4j_A 258 VLG--KGLAAGYAPLAGLLAAP--------------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER---EDL 318 (430)
T ss_dssp EEC--GGGTTTSSCCEEEEECH--------------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH---TTH
T ss_pred EEc--ccccCCccccEEEEECH--------------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc---ccH
Confidence 766 8775 5 7779999987 566655442 11112223445555555566765432 334
Q ss_pred HHHHHHHHHHHHHHHHhc-----CCEEecCCCCcceeeeeccCC--------CCcHHHHHHhhcccCeEEcccccCCCC-
Q 010058 358 QEQVLSNSSKFARSLLER-----GYDLVSGGTENHLVLVNLRNK--------GIDGSRVEKVLESVHIAANKNTVPGDV- 423 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~~v~~~~~--------~~~~~~~~~~L~~~gI~v~~~~~p~~~- 423 (519)
.++++++.+++.+.|.+. ++..+.+ ...+.++.+... .....++.+.|.+.||.++ |+..
T Consensus 319 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~~ 392 (430)
T 3i4j_A 319 TGAAKERGAQLLAGLQALQARFPQMMQVRG--TGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITY----PGSGA 392 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTEEEEEE--ETTEEEEEEC------------CHHHHHHHHHHTTEECC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEE--EEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEE----ecccc
Confidence 555566666666665543 3333332 223555554321 0113567788888999997 3311
Q ss_pred -CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 424 -SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 424 -~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+..++.+||+++...+ ++|++++++.|+++++.
T Consensus 393 ~~~~~~~~iRi~~~~~~t----~e~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 393 EPNGRGDHLLLGPPLSIT----AAEVDGLLALLAGALED 427 (430)
T ss_dssp ------CEEEECCCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCCC----HHHHHHHHHHHHHHHHH
Confidence 12235789999988788 89999999999998864
No 193
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.6e-20 Score=193.90 Aligned_cols=288 Identities=18% Similarity=0.168 Sum_probs=183.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+....++ +++++++|.+. .+.++||+.|+..++.++++|||+|+++++.|++....... .....|..
T Consensus 81 p~~~~l~----~~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~----~~~~~g~~ 147 (414)
T 3ndn_A 81 PTVSVFE----ERLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSE----ILPRWGVQ 147 (414)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHT----HHHHTTCE
T ss_pred hHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHH----HHHHcCcE
Confidence 4455555 88889999753 47788887798889999999999999999888776432211 00112444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ .+ |++++++++++ ++++|+++ ++| +|...|+++|+++|+++|++||+|++|..|.....+ ..
T Consensus 148 ~~~v~--~~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~- 216 (414)
T 3ndn_A 148 TVFVD--GD------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-PL- 216 (414)
T ss_dssp EEEEC--TT------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-GG-
T ss_pred EEEeC--CC------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hc-
Confidence 44443 21 89999999987 89999998 666 889999999999999999999999998876543222 11
Q ss_pred CCCCeEEEEcCCCcccC---CCcceEEeecccccccccCcchhhhHHHHhhhc-ccCCCCCCccHHHHHHHHHHHHHhcC
Q 010058 276 FEYADVVTTTTHKSLRG---PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-VFPGLQGGPHNHTISGLAVALKQVKT 351 (519)
Q Consensus 276 ~~~~di~~~S~~K~l~G---prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~~~~g~~~~~~iaal~~al~~~~~ 351 (519)
++|+++.|++|+++| +++|+++++++ .+.+.+... ...+ ++.... . .+.++..+
T Consensus 217 --g~div~~S~sK~l~~~G~~~~G~vv~~~~-------------~~~~~l~~~~~~~g--~~~~~~--~-a~~~~~~l-- 274 (414)
T 3ndn_A 217 --GVDVVVYSGTKHIDGQGRVLGGAILGDRE-------------YIDGPVQKLMRHTG--PAMSAF--N-AWVLLKGL-- 274 (414)
T ss_dssp --TCSEEEEETTTTTTCSSCCCCEEEEECHH-------------HHTTHHHHHHHHHC--CCCCHH--H-HHHHHHHG--
T ss_pred --CCCeEeccCCccccCCCCceEEEEEECHH-------------HHHHHHHHHHHHcC--CCCCHH--H-HHHHHHHH--
Confidence 589999999999976 45799999873 111122211 0011 111211 1 12223322
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhc-CCEEe-cCCC---------------CcceeeeeccCC----CCcHHHHHHhhccc
Q 010058 352 PEYKAYQEQVLSNSSKFARSLLER-GYDLV-SGGT---------------ENHLVLVNLRNK----GIDGSRVEKVLESV 410 (519)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~---------------~~~~~~v~~~~~----~~~~~~~~~~L~~~ 410 (519)
..+....++..++++.+.+.|++. ++..+ .++- ...++.+.+... ......+.+.|...
T Consensus 275 ~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~ 354 (414)
T 3ndn_A 275 ETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLI 354 (414)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccc
Confidence 235667788899999999999887 44332 2221 123455555321 11244566667667
Q ss_pred CeEEccccc------CCCC------------CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 411 HIAANKNTV------PGDV------------SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 411 gI~v~~~~~------p~~~------------~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
++.++.... |... ....++.||||++. |+.+.+++.|++++
T Consensus 355 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--------e~~~dli~dl~~al 413 (414)
T 3ndn_A 355 DISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--------EDTDDLIADIDRAL 413 (414)
T ss_dssp EECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--------SCHHHHHHHHHHHH
T ss_pred eEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--------CCHHHHHHHHHHhh
Confidence 776653210 1100 01235789999763 66677777776654
No 194
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.85 E-value=1.9e-20 Score=192.95 Aligned_cols=288 Identities=16% Similarity=0.152 Sum_probs=186.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+...+++ +.+++++|.+. .|.++||+.|+..++. +++|||+|+++++.|+++....... ....|..
T Consensus 67 p~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~----~~~~G~~ 132 (403)
T 3cog_A 67 PTRNCLE----KAVAALDGAKY-----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQV----ASEFGLK 132 (403)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHT----GGGGTCE
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHH----HHHcCCE
Confidence 4455666 88888888862 5999999888887888 8999999999998887754322100 1122444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcC-CEEEehhhhhhhccccCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQK-AVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~-~~livD~ah~~g~~~~~~~~~ 274 (519)
+..++ .+ |++++++++++ ++++|+++ ++| +|...|+++|.++|+++| +++++|++|..+... .
T Consensus 133 v~~v~--~~------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~-----~ 198 (403)
T 3cog_A 133 ISFVD--CS------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQ-----R 198 (403)
T ss_dssp EEEEC--TT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTC-----C
T ss_pred EEEEC--CC------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccC-----C
Confidence 44433 21 89999999987 89999988 666 889999999999999999 999999998776432 1
Q ss_pred CCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 275 PFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
|+. ++|+++.|+||+++||. +|+++++++ ++.+.+....... .++++.....++..+++
T Consensus 199 ~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~-------------~l~~~l~~~~~~~-g~~~~~~~~~~~~~~l~--- 261 (403)
T 3cog_A 199 PLALGADISMYSATKYMNGHSDVVMGLVSVNCE-------------SLHNRLRFLQNSL-GAVPSPIDCYLCNRGLK--- 261 (403)
T ss_dssp TTTTTCSEEEEETTTTTTCSSCCCCEEEEECCH-------------HHHHHHHHHHHHH-CCCCCHHHHHHHHHHHT---
T ss_pred ccccCCeEEEEcChhhccCCCCCeEEEEEECcH-------------HHHHHHHHHHHhc-CCCCCHHHHHHHHhhhh---
Confidence 222 68999999999998875 599998643 4444443322211 12233333322223332
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhcC-C-EEecCC---------------CCcceeeeeccCCCCcHHHHHHhhcccCeE
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLERG-Y-DLVSGG---------------TENHLVLVNLRNKGIDGSRVEKVLESVHIA 413 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~~---------------~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~ 413 (519)
.+....++..+++..+.+.|++.. + .++.++ ....++.+.+. + ....+.+.|++.||.
T Consensus 262 --~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~--~-~~~~~~~~l~~~~i~ 336 (403)
T 3cog_A 262 --TLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIK--G-TLQHAEIFLKNLKLF 336 (403)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEES--S-CHHHHHHHHHHCSSS
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEec--C-CHHHHHHHHHhCCcc
Confidence 244456677778888888887652 1 111110 01234444443 2 235677788888886
Q ss_pred Ecccc---------cCCCCC------------CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 414 ANKNT---------VPGDVS------------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 414 v~~~~---------~p~~~~------------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+...+ .|.... ...++.|||+++..++ +++++.+.++|.+++
T Consensus 337 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~----~d~i~~l~~al~~~~ 399 (403)
T 3cog_A 337 TLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDE----EDLLEDLDQALKAAH 399 (403)
T ss_dssp EECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCH----HHHHHHHHHHHHHHC
T ss_pred eEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCH----HHHHHHHHHHHHHhh
Confidence 54221 122110 1125789999998777 788887777776544
No 195
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.85 E-value=4.8e-20 Score=189.31 Aligned_cols=316 Identities=15% Similarity=0.147 Sum_probs=201.1
Q ss_pred CeeecCC---CC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPS---EN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~---en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.+++..+ .+ +.+|.+.+++.+.+.+ + ++.+ +.|. .+... ..++++++++|.+ +|.+++|+
T Consensus 42 ~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~-~--~~~~-~~~~-~~~~~----~l~~~la~~~g~~------~v~~~~gg 106 (397)
T 2ord_A 42 YLDFTSGIAVNVLGHSHPRLVEAIKDQAEK-L--IHCS-NLFW-NRPQM----ELAELLSKNTFGG------KVFFANTG 106 (397)
T ss_dssp EEESSHHHHTCTTCBTCHHHHHHHHHHHHH-C--SCCC-TTSE-EHHHH----HHHHHHHHTTTSC------EEEEESSH
T ss_pred EEECCccccccccCCCCHHHHHHHHHHHHh-c--ccCc-cccC-CHHHH----HHHHHHHHhcCCC------eEEEeCCH
Confidence 4566543 22 2589999999998865 3 2222 1221 23333 4448888888843 36666655
Q ss_pred H-HHHHHHHhhcC------C-CCEEEEecCCCcccccccccccCCceeeeeee------------eEEEeeeeCCCCCCC
Q 010058 153 P-ANFQVYTALLK------P-HERIMALDLPHGGHLSHGYQTDTKKISAVSIF------------FETMPYRLDESTGYI 212 (519)
Q Consensus 153 ~-a~~~~~~all~------p-GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~------------~~~v~~~~d~~~~~i 212 (519)
+ |+..++.++.. | +|+|++++..+.+...... ...|.. +..++ . .
T Consensus 107 ~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~-------~~~g~~~~~~~~~p~~~~~~~~~--~------~ 171 (397)
T 2ord_A 107 TEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSL-------TATGQPKYQKPFEPLVPGFEYFE--F------N 171 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHH-------HHSBCHHHHGGGCSCCTTEEEEC--T------T
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhh-------hccCChhhccccCCCCCCeeEec--C------C
Confidence 5 88888887753 5 4788888766533322111 111211 22222 1 3
Q ss_pred CHHHHHHHhhhhCCcEEEEc-ccc-ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CCC-CCeEEE
Q 010058 213 DYEQLEKSAALFRPKLIVAG-ASA-YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PFE-YADVVT 283 (519)
Q Consensus 213 D~d~l~~~i~~~k~klIi~~-~sn-~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~~-~~di~~ 283 (519)
|++++++++++ ++++|+++ ++| +|. ..++++|+++|+++|+++|+|++|. |+...+.... .++ ..|+++
T Consensus 172 d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~s 249 (397)
T 2ord_A 172 NVEDLRRKMSE-DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVLT 249 (397)
T ss_dssp CHHHHHHHCCT-TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEE
T ss_pred CHHHHHHHhhc-CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCeee
Confidence 89999999986 89999998 445 676 3578999999999999999999985 5433221100 001 368775
Q ss_pred EcCCCccc-CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH
Q 010058 284 TTTHKSLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362 (519)
Q Consensus 284 ~S~~K~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~ 362 (519)
+ +|+++ |.|.|+++++++ +. .+..... ....+.+....+++.++++.... ++..++++
T Consensus 250 ~--sK~~~~G~r~G~~~~~~~--------------~~-~l~~~~~-~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~ 308 (397)
T 2ord_A 250 T--AKGLGGGVPIGAVIVNER--------------AN-VLEPGDH-GTTFGGNPLACRAGVTVIKELTK---EGFLEEVE 308 (397)
T ss_dssp E--CGGGGTTSCCEEEEECST--------------TC-CCCTTSS-CCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHH
T ss_pred e--ccccCCCcCeEEEEEchH--------------hc-ccCCCCc-CCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHH
Confidence 5 69886 567799999873 32 3321111 11123455566666677776654 45678888
Q ss_pred HHHHHHHHHHHhc--CCEEecC-CCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccc
Q 010058 363 SNSSKFARSLLER--GYDLVSG-GTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALT 439 (519)
Q Consensus 363 ~~~~~l~~~L~~~--g~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~t 439 (519)
++++++.+.|++. +++++.. .....++++.+.. +.+..++.+.|.+.||.+. |+. ++.+|++++..+
T Consensus 309 ~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~----~~~-----~~~iRis~~~~~ 378 (397)
T 2ord_A 309 EKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFRE-EVSNREVATKCFENKLLVV----PAG-----NNTIRFLPPLTV 378 (397)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECT-TSCHHHHHHHHHHTTEECE----EET-----TTEEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECC-hHHHHHHHHHHHHCCCEEc----cCC-----CCEEEEECCcCC
Confidence 9999999999876 3432210 1123455666543 2357778888888999986 332 468999988767
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 010058 440 SRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 440 trg~~~~di~~l~~~l~~~l~ 460 (519)
+ ++|++++++.|.++++
T Consensus 379 ~----~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 379 E----YGEIDLAVETLKKVLQ 395 (397)
T ss_dssp C----HHHHHHHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHHHHh
Confidence 7 8999999999998874
No 196
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.85 E-value=3.7e-20 Score=191.18 Aligned_cols=288 Identities=12% Similarity=0.067 Sum_probs=183.4
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
++..+++| +++++++|.+. .|.++||+.|+..++.++++|||+|++.+..|++........ ....|.
T Consensus 81 ~p~~~~le----~~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~----l~~~G~ 147 (415)
T 2fq6_A 81 TLTHFSLQ----QAMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKI----LSKLGV 147 (415)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHT----GGGGTC
T ss_pred CchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCc
Confidence 34555566 88889999863 478888877988899999999999999998887765432110 111243
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhh--cCCEEEehhhhhhhccccCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDK--QKAVMLADMAHISGLVAAGVI 272 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~--~~~~livD~ah~~g~~~~~~~ 272 (519)
.+..++ . .|++++++++++ +|++|+++ ++| +|...|+++|.++|++ +|+++++|++|..+...
T Consensus 148 ~v~~v~--~------~d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~---- 214 (415)
T 2fq6_A 148 TTSWFD--P------LIGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLF---- 214 (415)
T ss_dssp EEEEEC--T------TCGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSS----
T ss_pred EEEEEC--C------CCHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccC----
Confidence 333332 1 278999998887 89999988 666 7899999999999999 99999999998765321
Q ss_pred CCCCC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhccc-CCCCCCccHHHHHHHHHHHH
Q 010058 273 PSPFE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVF-PGLQGGPHNHTISGLAVALK 347 (519)
Q Consensus 273 ~~p~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~-~~~~g~~~~~~iaal~~al~ 347 (519)
.|+. ++|++++|+||+++|+. +|+++++++ +.+.+..... .+ +.........+..+++
T Consensus 215 -~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~--------------~~~~l~~~~~~~G--~~~~~~~a~~~~~~l~ 277 (415)
T 2fq6_A 215 -KALDFGIDVSIQAATKYLVGHSDAMIGTAVCNAR--------------CWEQLRENAYLMG--QMVDADTAYITSRGLR 277 (415)
T ss_dssp -CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTT--------------THHHHHHHHHHTT--CCCCHHHHHHHHHHHH
T ss_pred -CccccCCeEEEEeCccccCCCCCceEEEEEeCHH--------------HHHHHHHHHHhcC--CCCCHHHHHHHHhhhh
Confidence 1222 68999999999998765 689998873 3333322111 11 1222221121222232
Q ss_pred HhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCE-EecCCC---------------CcceeeeeccCCCCcHHHHHHhhc--
Q 010058 348 QVKTPEYKAYQEQVLSNSSKFARSLLER-GYD-LVSGGT---------------ENHLVLVNLRNKGIDGSRVEKVLE-- 408 (519)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~L~-- 408 (519)
.+....++..+|++.+.+.|.+. ++. +..++- ...++.+.+.. +.+..+...+|.
T Consensus 278 -----~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g-~~~~~~~~~~l~~l 351 (415)
T 2fq6_A 278 -----TLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKK-KLNNEELANYLDNF 351 (415)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS-CCCHHHHHHHHTTC
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-CCCHHHHHHHHHhC
Confidence 34556677788999999999887 333 222210 12334444431 111234444444
Q ss_pred -ccCeEEcccc------c--CCCC--------CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHH
Q 010058 409 -SVHIAANKNT------V--PGDV--------SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDA 457 (519)
Q Consensus 409 -~~gI~v~~~~------~--p~~~--------~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~ 457 (519)
..+|.++... . |+.. -....+.||+|++..++ +++++.+.++|++
T Consensus 352 ~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~----~d~i~~l~~al~~ 413 (415)
T 2fq6_A 352 SLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDV----DDLIADLDAGFAR 413 (415)
T ss_dssp SSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCH----HHHHHHHHHHHHT
T ss_pred CcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCH----HHHHHHHHHHHHh
Confidence 3456555321 1 2100 01124789999998888 8888888888764
No 197
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.85 E-value=6.2e-20 Score=188.42 Aligned_cols=287 Identities=16% Similarity=0.165 Sum_probs=183.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+...+++ +++++++|.+. .+.++||+.|+..++.+++++||+|++.+..|++........ ....|..
T Consensus 66 ~~~~~l~----~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~----~~~~g~~ 132 (392)
T 3qhx_A 66 PTRTALE----AALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKV----FTGWNVE 132 (392)
T ss_dssp HHHHHHH----HHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHT----GGGGTCE
T ss_pred hHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHH----HHhcCcE
Confidence 4444555 88899999873 477788877999899999999999999998887654332110 1112333
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++ .+ |++++++++.+ ++++|++. ++| +|...|+++|+++|+++|+++|+|++|..+... .|
T Consensus 133 ~~~v~--~~------d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-----~~ 198 (392)
T 3qhx_A 133 YTPVA--LA------DLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-----QP 198 (392)
T ss_dssp EEEEC--TT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-----CG
T ss_pred EEEeC--CC------CHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-----Ch
Confidence 33332 21 89999999987 89999988 666 789999999999999999999999998755321 12
Q ss_pred CC-CCeEEEEcCCCcccCC---CcceEEeecccccccccCcchhhhHHHHhhhccc-CCCCCCccHHHHHHHHHHHHHhc
Q 010058 276 FE-YADVVTTTTHKSLRGP---RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVF-PGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gp---rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~-~~~~g~~~~~~iaal~~al~~~~ 350 (519)
+. ++|+++.|+||+++|+ ++|+++++++ ++.+.+..... .+ .+++....+. ++..+.
T Consensus 199 ~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~-------------~~~~~l~~~~~~~g--~~~~~~~~~~---~~~~l~ 260 (392)
T 3qhx_A 199 LSLGADVVLHSTTKYIGGHSDVVGGALVTNDE-------------ELDQSFAFLQNGAG--AVPGPFDAYL---TMRGLK 260 (392)
T ss_dssp GGGTCSEEEEETTTTTTCSSCCCCEEEEESCH-------------HHHHHHHHHHHHHC--CCCCHHHHHH---HHHHHT
T ss_pred HHhCCcEEEEcCccccCCCCCceEEEEEECcH-------------HHHHHHHHHHHhcC--CCCCHHHHHH---HHhhhh
Confidence 22 6899999999999764 5799998853 34443332211 11 1122222222 222222
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc-CCEEe-cCCCC---------------cceeeeeccCCCCcHHHHHHhhcccCeE
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER-GYDLV-SGGTE---------------NHLVLVNLRNKGIDGSRVEKVLESVHIA 413 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~---------------~~~~~v~~~~~~~~~~~~~~~L~~~gI~ 413 (519)
. +....++..++++.+.+.|++. ++..+ .++-. ..++.+.+.........+...|+..+|.
T Consensus 261 ~--l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~ 338 (392)
T 3qhx_A 261 T--LVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILA 338 (392)
T ss_dssp T--HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEEC
T ss_pred H--HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceEC
Confidence 2 5566788889999999999887 44332 22211 2244455432112345566677777777
Q ss_pred Eccccc------CCCC---------CCCCCCeEEeccCccccCCCCHHHHHHHHHHH
Q 010058 414 ANKNTV------PGDV---------SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFF 455 (519)
Q Consensus 414 v~~~~~------p~~~---------~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l 455 (519)
++.... |... ....++.||||+...++ +++++.+.++|
T Consensus 339 ~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~----~~~i~~l~~al 391 (392)
T 3qhx_A 339 ESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDV----ADLLDDLKQAL 391 (392)
T ss_dssp SCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCH----HHHHHHHHHHH
T ss_pred CCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCH----HHHHHHHHHHh
Confidence 763221 1100 01246789999886655 56666665554
No 198
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.85 E-value=8.3e-20 Score=189.25 Aligned_cols=327 Identities=13% Similarity=0.140 Sum_probs=201.8
Q ss_pred cCeeecCC---CC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPS---EN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~---en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+ .+ +.+|.|.+++.+.+.. + ++... .| ..+.. ...++++++++|.+ +|++++|
T Consensus 58 ~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~-~--~~~~~-~~-~~~~~----~~l~~~la~~~g~~------~v~~~~g 122 (420)
T 2pb2_A 58 EYIDFAGGIAVTALGHCHPALVEALKSQGET-L--WHTSN-VF-TNEPA----LRLGRKLIDATFAE------RVLFMNS 122 (420)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTT-C--CCCCT-TS-CCHHH----HHHHHHHHHHSSCS------EEEEESS
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHh-c--ccccC-cc-CCHHH----HHHHHHHHhhCCCC------eEEEeCC
Confidence 34666544 22 3589999999988865 3 22221 22 12333 34448888888843 3666666
Q ss_pred HH-HHHHHHHhhcC-------CC-CEEEEecCCCcccccccccccCCceeeee-----eeeEEEeeeeCCCCCCCCHHHH
Q 010058 152 SP-ANFQVYTALLK-------PH-ERIMALDLPHGGHLSHGYQTDTKKISAVS-----IFFETMPYRLDESTGYIDYEQL 217 (519)
Q Consensus 152 s~-a~~~~~~all~-------pG-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g-----~~~~~v~~~~d~~~~~iD~d~l 217 (519)
++ |+..++.++.. || ++|+++++.+.+................+ ..+..++ ..|+++|
T Consensus 123 gteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~--------~~d~~~l 194 (420)
T 2pb2_A 123 GTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVP--------FNDLHAV 194 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEEC--------TTCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEec--------CCCHHHH
Confidence 55 99888888765 78 48999887664432211100000000000 0011222 1389999
Q ss_pred HHHhhhhCCcEEEEcccc-c-cc----cccHHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCC
Q 010058 218 EKSAALFRPKLIVAGASA-Y-AR----LYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHK 288 (519)
Q Consensus 218 ~~~i~~~k~klIi~~~sn-~-g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K 288 (519)
++++++ ++++|++++.+ . |. ..++++|+++|++||++||+|++| .|+...+... ..++ ..|++++ +|
T Consensus 195 e~~i~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~-~g~~~~g~~~~~~~~~~~~diit~--sK 270 (420)
T 2pb2_A 195 KAVMDD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQ-CGMGRTGDLFAYMHYGVTPDILTS--AK 270 (420)
T ss_dssp HHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSHHHHHTCCCSEEEE--CG
T ss_pred HHHhcc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCC-cCcccCCcHHHHHhcCCCCCeEEe--cc
Confidence 999986 89999998443 3 32 356899999999999999999998 4543322110 0011 4688865 59
Q ss_pred ccc-CCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHH
Q 010058 289 SLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSK 367 (519)
Q Consensus 289 ~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~ 367 (519)
+++ |.|.|++++++ ++.+.+....... ..+.+....++..++++.+.. +++.+++++++++
T Consensus 271 ~l~~G~~iG~~~~~~--------------~l~~~l~~~~~~~-t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~ 332 (420)
T 2pb2_A 271 ALGGGFPVSAMLTTQ--------------EIASAFHVGSHGS-TYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQ 332 (420)
T ss_dssp GGGTTSCCEEEEECH--------------HHHTTCC----CC-EECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHH
T ss_pred cccCCCceEEEEEhH--------------HHHHhhcCCCcCc-ccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHH
Confidence 885 45679999987 4444333211111 123355555666667777654 4567888889999
Q ss_pred HHHHHHhc--CCEEecC-CCCcceeeeeccCC-CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 368 FARSLLER--GYDLVSG-GTENHLVLVNLRNK-GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 368 l~~~L~~~--g~~~~~~-~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
|.+.|++. +++.+.. .....++++.+... +.+..++.+.|.+.||.++ |+. ++.+||+++..++
T Consensus 333 l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~----~~~-----~~~iRl~~~~~~t--- 400 (420)
T 2pb2_A 333 FVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVL----NAG-----ADVMRFAPSLVVE--- 400 (420)
T ss_dssp HHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGTTCHHHHHHHHHHTTEECE----ESS-----TTEEEECCCTTCC---
T ss_pred HHHHHHHHHhcCCCeEEEEecceEEEEEECCCchHHHHHHHHHHHHCCCEEE----eCC-----CCEEEEECCCCCC---
Confidence 99988775 3332211 11234556665431 1246778888888999986 332 4689999887777
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|+++++.
T Consensus 401 -~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 401 -EADIHEGMQRFAQAVGK 417 (420)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 89999999999998864
No 199
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.85 E-value=3.3e-20 Score=192.21 Aligned_cols=299 Identities=17% Similarity=0.127 Sum_probs=185.2
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
++...++| +++++++|.+. .+.++||+.|+..++.++++|||+|++.+..|++....... .+...|.
T Consensus 81 ~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~----~~~~~G~ 147 (430)
T 3ri6_A 81 NPTVEDLE----QRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQK----TLPSFGI 147 (430)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHT----HHHHTTC
T ss_pred CHHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHH----HHHHcCC
Confidence 35556666 88889999864 48899998899889999999999999999888776542210 1112244
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
.+..++ .+ |++++++++++ +|++|+++ ++| +|...|+++|+++|+++|+++|+|+++..+... .
T Consensus 148 ~~~~v~--~~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~-----~ 213 (430)
T 3ri6_A 148 EVRFVD--VM------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL-----E 213 (430)
T ss_dssp EEEEEC--TT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC-----C
T ss_pred EEEEeC--CC------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-----C
Confidence 444433 21 89999999987 89999988 667 889999999999999999999999998866542 1
Q ss_pred CCC-CCeEEEEcCCCcccCC---CcceEEeecccccc-c--------ccCcchhhhHHHHhhhcccCCCCCCccHHHHHH
Q 010058 275 PFE-YADVVTTTTHKSLRGP---RGAMIFFRKGVKEI-N--------KQGQEVMYAYEDKINQAVFPGLQGGPHNHTISG 341 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gp---rgG~i~~~~~~~~~-~--------~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaa 341 (519)
|.. ++|+++.|++|+++|+ .||+++.+...... + ..|.. .+..++....... .|+......+.
T Consensus 214 ~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~---~~i~~~~~~~~~~-~g~~~~~~~a~ 289 (430)
T 3ri6_A 214 AKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPM---AFLYKARKEVFQN-LGPSLSPHNAY 289 (430)
T ss_dssp GGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGG---HHHHHHHHTHHHH-HCCCCCHHHHH
T ss_pred hHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchh---hHHHHHHHHHHHh-cCCCCCHHHHH
Confidence 222 6899999999999886 56888865431110 0 00000 1111111100000 11111111111
Q ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc-CCEEe-cCCCC--------------cc-eeeeeccCCCCcHHHHH
Q 010058 342 LAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER-GYDLV-SGGTE--------------NH-LVLVNLRNKGIDGSRVE 404 (519)
Q Consensus 342 l~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~--------------~~-~~~v~~~~~~~~~~~~~ 404 (519)
.++..+ ..+....++..+|++.+.+.|++. ++..+ .++-. .. ++++.+.. ..+...+.
T Consensus 290 --l~l~~l--~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~-~~~~~~~~ 364 (430)
T 3ri6_A 290 --LQSLGL--ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES-KEASYRFM 364 (430)
T ss_dssp --HHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-HHHHHHHH
T ss_pred --HHHhhh--hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-HHHHHHHH
Confidence 122221 235566778899999999999887 56533 33311 12 55666541 12234455
Q ss_pred HhhcccCeEEccccc------CCC---C---------CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHH
Q 010058 405 KVLESVHIAANKNTV------PGD---V---------SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAV 459 (519)
Q Consensus 405 ~~L~~~gI~v~~~~~------p~~---~---------~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l 459 (519)
+.|...++.++...+ |.. . ....++.||||+. .|+.+.+++.|++++
T Consensus 365 ~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG--------~E~~~dl~~dl~~al 429 (430)
T 3ri6_A 365 DALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVG--------IEEIEDLKEDILQAL 429 (430)
T ss_dssp HHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECC--------SSCHHHHHHHHHHHH
T ss_pred HhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHhh
Confidence 555556666552110 100 0 0124678999976 367777777777665
No 200
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.85 E-value=4.3e-20 Score=189.63 Aligned_cols=285 Identities=12% Similarity=0.090 Sum_probs=180.4
Q ss_pred HHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeC
Q 010058 127 CQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLD 206 (519)
Q Consensus 127 ~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d 206 (519)
+++.+++++|.+. .|+++||+.|+..++. +++|||+|+++++.|++.+..... .....|..+..++. +
T Consensus 60 lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~----~~~~~G~~v~~v~~--~ 127 (393)
T 1n8p_A 60 LERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTK----VANAHGVETSFTND--L 127 (393)
T ss_dssp HHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHH----TSTTTCSCCEEESS--H
T ss_pred HHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHH----HHHHcCcEEEEeCC--C
Confidence 3488899999873 5999999778888888 999999999999888765432110 01112444444432 2
Q ss_pred CCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhc----CCEEEehhhhhhhccccCCCCCCCCCCe
Q 010058 207 ESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQ----KAVMLADMAHISGLVAAGVIPSPFEYAD 280 (519)
Q Consensus 207 ~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~----~~~livD~ah~~g~~~~~~~~~p~~~~d 280 (519)
| +++++++++ ++++|+++ ++| +|...|+++|.++|+++ |+++|+|++|..+... ..... ++|
T Consensus 128 ------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~---~~d 195 (393)
T 1n8p_A 128 ------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNF---GAD 195 (393)
T ss_dssp ------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGG---TCS
T ss_pred ------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHc---CCe
Confidence 7 889998886 89999988 666 89999999999999999 9999999999877542 21111 689
Q ss_pred EEEEcCCCcccCCC--c-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 281 VVTTTTHKSLRGPR--G-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 281 i~~~S~~K~l~Gpr--g-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
++++|+||+++++. . |+++++++ ++.+.+.....+. .+++.....+++..+++ .+...
T Consensus 196 i~~~S~sK~~g~~G~rigG~~~~~~~-------------~~~~~l~~~~~~~-g~~~~~~~~~~~~~~l~-----~~~~~ 256 (393)
T 1n8p_A 196 IVVHSATKYINGHSDVVLGVLATNNK-------------PLYERLQFLQNAI-GAIPSPFDAWLTHRGLK-----TLHLR 256 (393)
T ss_dssp EEEEETTTTTTCSSCCCCEEEEESCH-------------HHHHHHHHHHHHH-CCCCCHHHHHHHHHHHT-----THHHH
T ss_pred EEEEECcccccCCCCceeEEEEeCCH-------------HHHHHHHHHHHhc-CCCCCHHHHHHHHhccc-----hHHHH
Confidence 99999999986543 3 99988632 4444433221110 01222222222222322 24556
Q ss_pred HHHHHHHHHHHHHHHHhcC--CE-EecCCC----------------C-cceeeeeccCCCCcHHHHHHhhcccCeEEccc
Q 010058 358 QEQVLSNSSKFARSLLERG--YD-LVSGGT----------------E-NHLVLVNLRNKGIDGSRVEKVLESVHIAANKN 417 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~g--~~-~~~~~~----------------~-~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~ 417 (519)
.++..++++.+.+.|.+.+ +. +..++- . .+++.+.+.....+...+...|...+|.++..
T Consensus 257 ~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G 336 (393)
T 1n8p_A 257 VRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLG 336 (393)
T ss_dssp HHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCC
Confidence 6777888999999998763 32 212210 1 23444444321012334445555556655432
Q ss_pred c------cCCCCC----------C--CCCCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 418 T------VPGDVS----------A--MVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 418 ~------~p~~~~----------~--~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
. .|+... . ...+.||+|++..++ +++++.+.++|+++
T Consensus 337 ~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~----~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 337 GIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDT----DDLLEDIKQALKQA 391 (393)
T ss_dssp CSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCH----HHHHHHHHHHHHHH
T ss_pred CCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCH----HHHHHHHHHHHHHh
Confidence 1 122111 1 125789999999888 89999999988764
No 201
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.84 E-value=3.8e-20 Score=190.74 Aligned_cols=347 Identities=15% Similarity=0.088 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHhcccCeeecCC-------CCCCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHc
Q 010058 63 EIADIIELEKARQWKGLELIPS-------ENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAF 135 (519)
Q Consensus 63 ~~~~~~~~e~~~~~~~i~L~a~-------en~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~ 135 (519)
.++.+.+..++...+-|+|..+ ..++.|.|++|....+.+....+ |....+..++++++.+.+ |
T Consensus 31 ~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~------Y~p~~G~p~lr~aia~~~---~ 101 (420)
T 4h51_A 31 VIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYE------YLPISGYQPFIDEAVKII---Y 101 (420)
T ss_dssp HHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCC------CCCTTCCHHHHHHHHHHH---H
T ss_pred hHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCC------CCCcCChHHHHHHHHHHh---c
Confidence 5666666554444456899766 23567899999887776543222 455567778887666554 3
Q ss_pred CCCCCCCcc-eEEeCCcHHHHHH----HHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee-eEEEeeeeCCCC
Q 010058 136 QLDPAKWGV-NVQSLSGSPANFQ----VYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF-FETMPYRLDEST 209 (519)
Q Consensus 136 g~~~~~~~~-~V~~~sGs~a~~~----~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~-~~~v~~~~d~~~ 209 (519)
|-+...-.+ .++..+|+.|... +...+++|||+|+++++.++.|.. .+...|.. +...++ .++++
T Consensus 102 g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~--------i~~~aG~~~V~~~~~-~~~~~ 172 (420)
T 4h51_A 102 GNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYG--------VVKAAGWKNICTYAY-YDPKT 172 (420)
T ss_dssp C---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHH--------HHHHTTCCCEEEEEC-EEGGG
T ss_pred CCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHH--------HHHHcCCeEEEeecc-ccccc
Confidence 432111001 2334444444433 333456899999999988877754 23334443 223333 34466
Q ss_pred CCCCHHHHHHHhhhh--CCcEEEEc-ccc-ccccc---cHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC------
Q 010058 210 GYIDYEQLEKSAALF--RPKLIVAG-ASA-YARLY---DYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF------ 276 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~--k~klIi~~-~sn-~g~~~---d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~------ 276 (519)
+.+|.+.+.+.+... ++++|+.+ ++| +|... .+++|.++|+++++++++|+++ .++...+....++
T Consensus 173 ~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y-~~~~~~~~~~~~~~~~~~~ 251 (420)
T 4h51_A 173 VSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAY-QGYASGSLDTDAYAARLFA 251 (420)
T ss_dssp TEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-TTTTTSCHHHHTHHHHHHH
T ss_pred cCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhh-hhhccCCcccchHHHHhHH
Confidence 789999988877542 45666666 667 78555 4778889999999999999984 3443322111000
Q ss_pred --CCCeEEEEcCCCc--ccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHH----
Q 010058 277 --EYADVVTTTTHKS--LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ---- 348 (519)
Q Consensus 277 --~~~di~~~S~~K~--l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~---- 348 (519)
...-+++.|++|+ |.|+|.|++++..+..... ..+...+..... ...+.++.+.....+..+..
T Consensus 252 ~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~-------~~~~~~l~~~~r-~~~s~~p~~~a~~~~~~l~d~~l~ 323 (420)
T 4h51_A 252 RRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKR-------ADVKSVMDSLIR-EEYTCPPAHGARLAHLILSNNELR 323 (420)
T ss_dssp HTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHH-------HHHHHHHHHHHH-TTTSSCCHHHHHHHHHHHHSHHHH
T ss_pred hhCceEEEEeccccccccccCceEEEEecccCHHHH-------HHHHHHHHHhhh-cccCcchHHHHHHHHHHhcCHHHH
Confidence 0124777889996 5799999998876421000 011111111111 12234454444443333321
Q ss_pred -hcCHhHHHHHHHHHHHHHHHHHHHHhcCCE----EecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCC
Q 010058 349 -VKTPEYKAYQEQVLSNSSKFARSLLERGYD----LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV 423 (519)
Q Consensus 349 -~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~ 423 (519)
.-..+.+.+++++.++++.|.+.|++.|.. .+.+ ....+.++ +++.+++ ++|+++||.+. |+
T Consensus 324 ~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~-q~GmF~~~-----gls~e~v-~~L~e~~Vy~~----~~-- 390 (420)
T 4h51_A 324 KEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVIN-QIGMFSFL-----GLSKAQC-EYCQNHNIFIT----VS-- 390 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHH-CCSSEEEC-----CCCHHHH-HHHHHTTEECC----TT--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecC-CCceEEec-----CcCHHHH-HHHHhCCEEEc----CC--
Confidence 112245677888999999999999998632 2221 12233332 4455554 67888999873 32
Q ss_pred CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 424 SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 424 ~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.||++..++ ++.+++++++|.++++.
T Consensus 391 -------gRis~Agl~-----~~ni~~~a~aI~~vvr~ 416 (420)
T 4h51_A 391 -------GRANMAGLT-----HETALMLAQTINDAVRN 416 (420)
T ss_dssp -------CEEEGGGCC-----HHHHHHHHHHHHHHHC-
T ss_pred -------CEEEeccCC-----HHHHHHHHHHHHHHHHH
Confidence 299876554 58999999999999974
No 202
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.84 E-value=1.8e-19 Score=188.22 Aligned_cols=326 Identities=11% Similarity=0.073 Sum_probs=199.2
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcC-
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARY-YGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLK- 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~-y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~- 164 (519)
.+|.|.+|+.+.+.+ + ++ .++ ....+.. ...+++++++++.+.+ +|++++|++ |+..++.++..
T Consensus 67 ~~~~v~~a~~~~~~~-~--~~--~~~~~~~~~~~----~~l~~~la~~~~~~~~----~v~~~~ggsea~~~al~~~~~~ 133 (449)
T 3a8u_X 67 TRKEIQEAVAKQLST-L--DY--SPGFQYGHPLS----FQLAEKITDLTPGNLN----HVFFTDSGSECALTAVKMVRAY 133 (449)
T ss_dssp SCHHHHHHHHHHTTT-C--SC--CCSSSCCCHHH----HHHHHHHHTTSSTTEE----EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-C--CC--ccccccCCHHH----HHHHHHHHHhCCCCCC----EEEEcCcHHHHHHHHHHHHHHH
Confidence 479999999988765 2 11 111 1112223 3444888888877653 477777666 88888887753
Q ss_pred -------CCCEEEEecCCCcccccccccccCC-------ceeeeeeeeEEEeeee--CCCCCCCC--------HHHHHHH
Q 010058 165 -------PHERIMALDLPHGGHLSHGYQTDTK-------KISAVSIFFETMPYRL--DESTGYID--------YEQLEKS 220 (519)
Q Consensus 165 -------pGD~Vl~~~~~~~~~~~~~~~~~~~-------~v~~~g~~~~~v~~~~--d~~~~~iD--------~d~l~~~ 220 (519)
+||+|++.+..+.+........... .....+ +..++++. +.....+| +++|+++
T Consensus 134 ~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~ 211 (449)
T 3a8u_X 134 WRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQD--VDHLPHTLLASNAYSRGMPKEGGIALADELLKL 211 (449)
T ss_dssp HHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCS--EEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCC--CeEecCCccccCccccCChHHHHHHHHHHHHHH
Confidence 7899999887665443211100000 000011 22333221 10001245 9999999
Q ss_pred hhh---hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhh-hhccccCCCCCCCC-CCeEEEEcCCCc
Q 010058 221 AAL---FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHI-SGLVAAGVIPSPFE-YADVVTTTTHKS 289 (519)
Q Consensus 221 i~~---~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~-~g~~~~~~~~~p~~-~~di~~~S~~K~ 289 (519)
+++ .++++|++++.+ +|...+ +++|+++|++||++||+|++|. .|..........+. ..|++++| |+
T Consensus 212 l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~s--K~ 289 (449)
T 3a8u_X 212 IELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIA--KQ 289 (449)
T ss_dssp HHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEEC--GG
T ss_pred HHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEc--cc
Confidence 874 256788887543 677777 9999999999999999999984 43221000000000 35877554 99
Q ss_pred ccC--CCcceEEeecccccccccCcchhhhHHHHhhhcc--------cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHH
Q 010058 290 LRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAV--------FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE 359 (519)
Q Consensus 290 l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~--------~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~ 359 (519)
+++ .|.|++++++ ++.+.+.... ..+...+.+...+++..++++.+.. +.+.+
T Consensus 290 l~~G~~~~G~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~ 352 (449)
T 3a8u_X 290 VTNGAIPMGAVIAST--------------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK---ENLVQ 352 (449)
T ss_dssp GGTTSSCCEEEEEEH--------------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHH
T ss_pred ccCCCCceEEEEECH--------------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh---cCHHH
Confidence 875 6789998887 5555444321 1111223355556666667775542 24677
Q ss_pred HHHHHHHHHHHHHHhcC-CEEecC-CCCcceeeeeccCCC--C--cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEe
Q 010058 360 QVLSNSSKFARSLLERG-YDLVSG-GTENHLVLVNLRNKG--I--DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRM 433 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~~v~~~~~~--~--~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 433 (519)
+++++++++.+.|++++ +..+.. .....++++.+.... . +..++.+.|.+.||.++ |+ .+.+||
T Consensus 353 ~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~------g~~iRi 422 (449)
T 3a8u_X 353 SVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVR----FG------GDTLQF 422 (449)
T ss_dssp HHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECE----EE------TTEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEe----cC------CCEEEE
Confidence 88888999999998753 332211 112346667664321 1 22357777878899997 32 168999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+++..++ ++|++++++.|.++++.
T Consensus 423 s~~~~~t----~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 423 GPTFNSK----PQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp CCCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred ECCCcCC----HHHHHHHHHHHHHHHHH
Confidence 9887777 89999999999998863
No 203
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.84 E-value=6.9e-19 Score=184.53 Aligned_cols=341 Identities=13% Similarity=0.048 Sum_probs=194.9
Q ss_pred cCeeecCC--CC---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~--en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++.++ .+ ..+|.|.+|+.+.+.+.. ..++.. . +..+.....+++++++++.+.+ +|++++|
T Consensus 52 ~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~~~~~~---~---~~~~~~~~la~~l~~~~~~~~~----~v~~~~g 120 (460)
T 3gju_A 52 KSIDAFAGLYCVNVGYGRQKIADAIATQAKNLA-YYHAYV---G---HGTEASITLAKMIIDRAPKGMS----RVYFGLS 120 (460)
T ss_dssp EEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHS-CCCCCT---T---CCCHHHHHHHHHHHHHSCTTEE----EEEEESS
T ss_pred EEEECCcchhhccCCCCCHHHHHHHHHHHHhcc-cccccc---c---cCCHHHHHHHHHHHhhCCCCcC----EEEEeCc
Confidence 34666544 22 247999999998876521 112111 1 1122334445888888876653 4777776
Q ss_pred HH-HHHHHHHhhcC--------CCCEEEEecCCCcccccccccc-----cCCceeeeeeeeEEEeeee--CCCCCCCC--
Q 010058 152 SP-ANFQVYTALLK--------PHERIMALDLPHGGHLSHGYQT-----DTKKISAVSIFFETMPYRL--DESTGYID-- 213 (519)
Q Consensus 152 s~-a~~~~~~all~--------pGD~Vl~~~~~~~~~~~~~~~~-----~~~~v~~~g~~~~~v~~~~--d~~~~~iD-- 213 (519)
++ |+.+++.++.. ++|+|++.+..+.+........ +..........+..++++. ..++...|
T Consensus 121 GseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 200 (460)
T 3gju_A 121 GSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEE 200 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHH
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChh
Confidence 65 99988888763 5699999887664432110000 0000000111223333222 11111223
Q ss_pred ------HHHHHHHhhh---hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCC
Q 010058 214 ------YEQLEKSAAL---FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPF 276 (519)
Q Consensus 214 ------~d~l~~~i~~---~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~ 276 (519)
+++|++++++ .++++|++.+.+ .|...+ +++|+++|++||++||+|++|. |+...+... .-+
T Consensus 201 ~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~ 279 (460)
T 3gju_A 201 QFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVT-GFGRLGTMFGSDHY 279 (460)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhc
Confidence 6889988873 367788888544 344344 8999999999999999999976 221111100 000
Q ss_pred C-CCeEEEEcCCCcccC--CCcceEEeecccccccccCcchhhhHHHHhhh------cccCCCCCCccHHHHHHHHHHHH
Q 010058 277 E-YADVVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ------AVFPGLQGGPHNHTISGLAVALK 347 (519)
Q Consensus 277 ~-~~di~~~S~~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~------~~~~~~~g~~~~~~iaal~~al~ 347 (519)
+ ..|++++| |+|+| +|.|++++++ ++.+.+.. ....+...+.+....++..++++
T Consensus 280 ~~~pdi~t~s--K~l~gG~~~lg~v~~~~--------------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 343 (460)
T 3gju_A 280 GIKPDLITIA--KGLTSAYAPLSGVIVAD--------------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLE 343 (460)
T ss_dssp TCCCSEEEEC--GGGTTTSSCCEEEEEEH--------------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred CCCCCeeeee--hhhcCCCCCeEEEEECH--------------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 0 35788766 99976 6889999988 55555532 11112222334455555566777
Q ss_pred HhcCHhHHHHHHHHHHHHHHHHHHH----HhcC-CEEecCCCCcceeeeeccCCC----------CcHHHHHHhhcccCe
Q 010058 348 QVKTPEYKAYQEQVLSNSSKFARSL----LERG-YDLVSGGTENHLVLVNLRNKG----------IDGSRVEKVLESVHI 412 (519)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~L----~~~g-~~~~~~~~~~~~~~v~~~~~~----------~~~~~~~~~L~~~gI 412 (519)
.+...+ +.++++++.+++++.| .+.+ +..+.+ ...+..+.+.... ....++.+.|.+.||
T Consensus 344 ~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 418 (460)
T 3gju_A 344 LIDEMD---LVTNAGETGAYFRAELAKAVGGHKNVGEVRG--DGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGV 418 (460)
T ss_dssp HHHHTT---HHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE--ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTE
T ss_pred HHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEee--eeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCe
Confidence 543322 3444444444444444 4443 223322 1234445443211 014467778888899
Q ss_pred EEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 413 AANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 413 ~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.++ |+. ..+.|||+++...+ ++|++++++.|++++...
T Consensus 419 ~v~----~~~----~~~~iRi~~~~~~t----~e~i~~~l~~l~~~l~~~ 456 (460)
T 3gju_A 419 IGR----AMP----QGDILGFAPPLCLT----REQADIVVSKTADAVKSV 456 (460)
T ss_dssp ECE----ECS----SSCEEEECCCTTCC----HHHHHHHHHHHHHHHHHH
T ss_pred EEe----cCC----CCCEEEEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 986 332 24789999888888 899999999999998743
No 204
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.84 E-value=5.7e-19 Score=181.20 Aligned_cols=323 Identities=15% Similarity=0.143 Sum_probs=194.9
Q ss_pred cCeeecCC--CCC---CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPS--ENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~--en~---~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++.++ .++ .+|.|.+++.+.+.+ . ++... .|. .+.. +..++++++++|.+ .|.+++|
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~--~~~~~-~~~-~~~~----~~l~~~la~~~~~~------~v~~~~g 101 (395)
T 3nx3_A 37 KYLDFSSGIGVCALGYNHAKFNAKIKAQVDK-L--LHTSN-LYY-NENI----AAAAKNLAKASALE------RVFFTNS 101 (395)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHTT-C--SCCCT-TSB-CHHH----HHHHHHHHHHHTCS------EEEEESS
T ss_pred EEEECCCcHHhccCCCCCHHHHHHHHHHHHh-c--ccccc-ccC-CHHH----HHHHHHHHHhcCCC------eEEEeCC
Confidence 35666554 333 479999999988765 2 11111 121 2333 34448888888843 3666666
Q ss_pred HH-HHHHHHHhhc-------CCCCEEEEecCCCcccccccccccCC-----ceeeeeeeeEEEeeeeCCCCCCCCHHHHH
Q 010058 152 SP-ANFQVYTALL-------KPHERIMALDLPHGGHLSHGYQTDTK-----KISAVSIFFETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 152 s~-a~~~~~~all-------~pGD~Vl~~~~~~~~~~~~~~~~~~~-----~v~~~g~~~~~v~~~~d~~~~~iD~d~l~ 218 (519)
++ |+..++.++. .+||+|++++..+.+........... .....+..+..++ ..|+++++
T Consensus 102 g~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~ 173 (395)
T 3nx3_A 102 GTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAK--------YNDISSVE 173 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEEC--------TTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeC--------CCCHHHHH
Confidence 65 8888887764 56899999987765443111100000 0000011111221 12799999
Q ss_pred HHhhhhCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC--CCCCCC-CCeEEEEcCCCc
Q 010058 219 KSAALFRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV--IPSPFE-YADVVTTTTHKS 289 (519)
Q Consensus 219 ~~i~~~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~--~~~p~~-~~di~~~S~~K~ 289 (519)
+++++ ++++|++.+.+ .|...+ +++|+++|++||++||+|++|. |+...+. .....+ ..|++++| |+
T Consensus 174 ~~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-~~g~~g~~~~~~~~~~~~d~~t~s--K~ 249 (395)
T 3nx3_A 174 KLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQC-GMGRSGKFFAYEHAQILPDIMTSA--KA 249 (395)
T ss_dssp TTCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GG
T ss_pred HhccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCcCCcchhHHhcCCCCCEEEec--cc
Confidence 99875 78888887333 555555 8999999999999999999975 2211111 000001 35788776 76
Q ss_pred cc-CCCcceEEeecccccccccCcchhhhH-HHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHH
Q 010058 290 LR-GPRGAMIFFRKGVKEINKQGQEVMYAY-EDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSK 367 (519)
Q Consensus 290 l~-GprgG~i~~~~~~~~~~~~g~~~~~~~-~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~ 367 (519)
++ |++.|++++++ ++ .+.+......+. .+.+....++..++++.+.. +++.++.+++.++
T Consensus 250 ~~~G~~~G~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~ 311 (395)
T 3nx3_A 250 LGCGLSVGAFVINQ--------------KVASNSLEAGDHGST-YGGNPLVCAGVNAVFEIFKE---EKILENVNKLTPY 311 (395)
T ss_dssp GTTTSCCEEEEECH--------------HHHHHHSCTTCCSSC-BSCCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHH
T ss_pred ccCCCceEEEEEch--------------hhhhhhcCCcccCCC-CCCCHHHHHHHHHHHHHHHh---hHHHHHHHHHHHH
Confidence 63 66779999988 55 555543222222 23345555555566665432 2344555556666
Q ss_pred HHHHHHhc----C-CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCC
Q 010058 368 FARSLLER----G-YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 442 (519)
Q Consensus 368 l~~~L~~~----g-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg 442 (519)
+.+.|.+. + +..+. ....+.++.+.. ..+..++.+.|.+.||.++ |+ ..+.+||+++..++
T Consensus 312 ~~~~l~~~~~~~~~~~~~~--~~g~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~----~~-----~~~~iRi~~~~~~t-- 377 (395)
T 3nx3_A 312 LEQSLDELINEFDFCKKRK--GLGFMQGLSLDK-SVKVAKVIQKCQENALLLI----SC-----GENDLRFLPPLILQ-- 377 (395)
T ss_dssp HHHHHHHHHHHCTTEEEEE--EETTEEEEEECT-TSCHHHHHHHHHHTTEECE----EE-----TTTEEEECCCTTCC--
T ss_pred HHHHHHHHHHhCCCeEEEE--eEEEEEEEEeCC-cchHHHHHHHHHHCCCEEe----cC-----CCCEEEEECCCCCC--
Confidence 66555543 2 22222 123455666543 2357778888888999987 32 25789999888888
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 010058 443 FVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 443 ~~~~di~~l~~~l~~~l~ 460 (519)
++|++++++.|+++++
T Consensus 378 --~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 378 --KEHIDEMSEKLRKALK 393 (395)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHH
Confidence 8999999999998875
No 205
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.83 E-value=8.3e-19 Score=182.65 Aligned_cols=337 Identities=12% Similarity=0.088 Sum_probs=196.7
Q ss_pred cCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+.+ ..+|.|.+++.+.+.... .|... .+.+.+...++++++++++...++ +|++++|
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~------~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g 112 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANPA--GATIL------SASNAPAVTLAERLLASFPGEGTH---KIWFGHS 112 (439)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCS--CSCSS------SSEEHHHHHHHHHHHHTTTCTTTE---EEEEESS
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHHhcc--Ccccc------ccCCHHHHHHHHHHHHhCCCCCCC---EEEEeCC
Confidence 3567765554 258999999998876521 12111 112234445558888988654411 3666665
Q ss_pred HH-HHHHHHHhh--cCCCCEEEEecCCCcccccccccccCCce-----eee--eeeeEEEeeeeCCCCCCC-----CHHH
Q 010058 152 SP-ANFQVYTAL--LKPHERIMALDLPHGGHLSHGYQTDTKKI-----SAV--SIFFETMPYRLDESTGYI-----DYEQ 216 (519)
Q Consensus 152 s~-a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v-----~~~--g~~~~~v~~~~d~~~~~i-----D~d~ 216 (519)
++ |+..++.++ +.+++.|++++..+.+............. .+. ...+..++++ ..+.. |+++
T Consensus 113 gsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~ 189 (439)
T 3dxv_A 113 GSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR---PYRNDPTGDAILTL 189 (439)
T ss_dssp HHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS---CBTTBTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC---cccccccHHHHHHH
Confidence 55 888888875 44677888877655333221111000000 000 0001112221 11111 7999
Q ss_pred HHHHhh---hhCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC-CC-CCCC-CCeEEEE
Q 010058 217 LEKSAA---LFRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV-IP-SPFE-YADVVTT 284 (519)
Q Consensus 217 l~~~i~---~~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~-~p~~-~~di~~~ 284 (519)
|++++. ..++++|++++++ .|...+ +++|+++|++||++||+|++|. |+...+. .. ..+. ..|++++
T Consensus 190 le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~di~s~ 268 (439)
T 3dxv_A 190 LTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPDILVL 268 (439)
T ss_dssp HHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCSEEEE
T ss_pred HHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCCEEEE
Confidence 999984 3367888888444 566666 9999999999999999999986 4322221 00 0011 3678765
Q ss_pred cCCCcc-cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Q 010058 285 TTHKSL-RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLS 363 (519)
Q Consensus 285 S~~K~l-~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~ 363 (519)
| |++ +|+|.|++++++ ++.+.+......... .+...+++..++++.... +.+.+++++
T Consensus 269 s--K~~~~G~riG~~~~~~--------------~~~~~~~~~~~~~t~--~~~~~~~aa~aal~~~~~---~~~~~~~~~ 327 (439)
T 3dxv_A 269 G--KGLGGGLPLSAVIAPA--------------EILDCASAFAMQTLH--GNPISAAAGLAVLETIDR---DDLPAMAER 327 (439)
T ss_dssp C--GGGGTTSCCEEEEEEH--------------HHHTSCSSSSCCTTT--TCHHHHHHHHHHHHHHHH---TTHHHHHHH
T ss_pred c--chhcCCcceEEEEECH--------------HHHhhhcCCCcCCCc--ccHHHHHHHHHHHHHHHh---cCHHHHHHH
Confidence 5 776 466789999988 555544332222222 344455555556665432 345566677
Q ss_pred HHHHHHHHHHhc----C-CEEecCCCCcceeeeecc-------CCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeE
Q 010058 364 NSSKFARSLLER----G-YDLVSGGTENHLVLVNLR-------NKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGI 431 (519)
Q Consensus 364 ~~~~l~~~L~~~----g-~~~~~~~~~~~~~~v~~~-------~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~i 431 (519)
+++++.+.|.+. + +..+.+ ...++++.+. +.+.+..++.+.|.+.||.+. |+.. .++.+
T Consensus 328 ~~~~~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~---~~~~i 398 (439)
T 3dxv_A 328 KGRLLRDGLSELAKRHPLIGDIRG--RGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVY----YVGM---NGNVL 398 (439)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEE--ETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECE----EEST---TSCEE
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEE--EEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEe----ecCC---CCCEE
Confidence 777777776654 2 222222 2334555542 112234567777878899986 3321 24789
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
||+++...+ ++|++++++.|.++++..
T Consensus 399 Ri~~~~~~t----~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 399 EFTPPLTIT----ETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp EECCCTTCC----HHHHHHHHHHHHHHHHTG
T ss_pred EEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 999888777 899999999999998754
No 206
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.83 E-value=2.7e-19 Score=185.96 Aligned_cols=328 Identities=13% Similarity=0.094 Sum_probs=195.4
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhc--C
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALL--K 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all--~ 164 (519)
.+|.|.+++.+.+.+ + ++... .|. .+ .....+++++++++.+.+ +|.+++|++ |+..++.++. .
T Consensus 60 ~~p~v~~a~~~~~~~-~--~~~~~-~~~-~~----~~~~l~~~la~~~~~~~~----~v~~~~gg~ea~~~a~~~~~~~~ 126 (433)
T 1zod_A 60 CHPEIVSVIGEYAGK-L--DHLFS-EML-SR----PVVDLATRLANITPPGLD----RALLLSTGAESNEAAIRMAKLVT 126 (433)
T ss_dssp TCHHHHHHHHHHHHH-C--CCCCT-TCC-CH----HHHHHHHHHHHHSCTTCC----EEEEESCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-C--ccccc-ccC-CH----HHHHHHHHHHHhCCCCcC----EEEEeCchHHHHHHHHHHHHHhh
Confidence 489999999988865 2 11111 111 12 223344778889987664 577777666 8888877653 3
Q ss_pred CCCEEEEecCCCcccccccccc----cCCc--eeeeeeeeEEEeeeeCC---------CCCCCCHHHHHHHhhh---hCC
Q 010058 165 PHERIMALDLPHGGHLSHGYQT----DTKK--ISAVSIFFETMPYRLDE---------STGYIDYEQLEKSAAL---FRP 226 (519)
Q Consensus 165 pGD~Vl~~~~~~~~~~~~~~~~----~~~~--v~~~g~~~~~v~~~~d~---------~~~~iD~d~l~~~i~~---~k~ 226 (519)
.+|+|+++++.+.+........ .... ....| +..++++... +.+.+|++++++++++ .++
T Consensus 127 ~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 204 (433)
T 1zod_A 127 GKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNL 204 (433)
T ss_dssp TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCE
T ss_pred CCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCC--ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCe
Confidence 4689999886654322100000 0000 00112 2233322100 0123579999999874 367
Q ss_pred cEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC-CCCC-CC-CCeEEEEcCCCccc-CCCcc
Q 010058 227 KLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV-IPSP-FE-YADVVTTTTHKSLR-GPRGA 296 (519)
Q Consensus 227 klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~-~~~p-~~-~~di~~~S~~K~l~-GprgG 296 (519)
++|++++++ +|...+ +++|+++|++||++||+|++|. |+...+. .... ++ ..|++++| |+++ |.|.|
T Consensus 205 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~g~~g~~~~~~~~~~~~di~s~s--K~~~~G~~ig 281 (433)
T 1zod_A 205 AAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQT-GVGRTGTMFACQRDGVTPDILTLS--KTLGAGLPLA 281 (433)
T ss_dssp EEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEEEEC--HHHHTTSSCE
T ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCchHhHHhhcCCCCCEEEec--ccccCCCCee
Confidence 788887543 575555 9999999999999999999987 2211111 0000 01 35777655 8874 56679
Q ss_pred eEEeecccccccccCcchhhhHHHHhhhcccC-CCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 297 MIFFRKGVKEINKQGQEVMYAYEDKINQAVFP-GLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 297 ~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~-~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
++++++ ++.+.+....+. +...+.+....++..++++.+.+. .+.+++.++++++.+.|+++
T Consensus 282 ~~~~~~--------------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l 344 (433)
T 1zod_A 282 AIVTSA--------------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDL 344 (433)
T ss_dssp EEEECH--------------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHH
T ss_pred EEEEhH--------------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHH
Confidence 999988 555555442111 111233455555556677655332 35677778888888888764
Q ss_pred ----CC-EEecCCCCcceeeeeccCC-------CCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCC
Q 010058 376 ----GY-DLVSGGTENHLVLVNLRNK-------GIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 443 (519)
Q Consensus 376 ----g~-~~~~~~~~~~~~~v~~~~~-------~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~ 443 (519)
+. ..+.+ ...++++++... ..+..++.+.|.+.||.+. |+.... .++.+||+++..++
T Consensus 345 ~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~~~-~~~~lRi~~~~~~t--- 414 (433)
T 1zod_A 345 MERFDCIGDVRG--RGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMN----IVQLPG-MGGVFRIAPPLTVS--- 414 (433)
T ss_dssp HHHCTTEEEEEE--ETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECC----EECCTT-SCCEEEECCCTTCC---
T ss_pred HHhCCCeEEEEE--EEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEe----ccCCCC-CCCEEEEECCcCCC---
Confidence 22 22221 234556665421 1235667777878999986 433211 24789999887788
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 010058 444 VEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 444 ~~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|.++++.
T Consensus 415 -~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 415 -EDEIDLGLSLLGQAIER 431 (433)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 89999999999988753
No 207
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.83 E-value=2.4e-19 Score=187.61 Aligned_cols=285 Identities=17% Similarity=0.133 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEee
Q 010058 124 ESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPY 203 (519)
Q Consensus 124 e~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~ 203 (519)
.+.+++++++++|.+. .+.+++|+.|+.+++ .+++|||+|+++++.|+++...... .+...|..+..++
T Consensus 135 ~~~l~~~la~~~g~~~-----~i~~~sGt~al~~~l-~~~~~Gd~Vi~~~~~y~~~~~~~~~----~~~~~G~~v~~v~- 203 (464)
T 1ibj_A 135 RDALESLLAKLDKADR-----AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQ----VVPRSGVVVKRVN- 203 (464)
T ss_dssp HHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHH-TTSCTTCEEEEESSCCHHHHHHHHH----TSGGGTCEEEEEC-
T ss_pred HHHHHHHHHHHhCCCe-----EEEECCHHHHHHHHH-HHhCCCCEEEEECCCchhHHHHHHH----HHHHcCCEEEEeC-
Confidence 4455589999999862 478888877877565 4889999999999888776432100 0122344444443
Q ss_pred eeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeE
Q 010058 204 RLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADV 281 (519)
Q Consensus 204 ~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di 281 (519)
. .|++++++++++ ++++|+++ ++| +|...|+++|+++|+++|+++|+|++|..|....... . ++|+
T Consensus 204 -~------~d~~~l~~~i~~-~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~-~---~~di 271 (464)
T 1ibj_A 204 -T------TKLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE-L---GADI 271 (464)
T ss_dssp -T------TSHHHHHHHCCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG-T---TCSE
T ss_pred -C------CCHHHHHHHhcc-CceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-c---CCEE
Confidence 2 289999999986 89999998 666 8999999999999999999999999998764321111 1 5899
Q ss_pred EEEcCCCcccCC---CcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHH
Q 010058 282 VTTTTHKSLRGP---RGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQ 358 (519)
Q Consensus 282 ~~~S~~K~l~Gp---rgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~ 358 (519)
+++|+||+++|| ++|+++++++ ++.+.+...... ..++.+.....+...+++ . .....
T Consensus 272 v~~S~sK~~~g~~Gl~~G~l~~~~~-------------~l~~~l~~~~~~-~g~~~~~~~~~a~~~al~---~--~~~r~ 332 (464)
T 1ibj_A 272 VMHSATKFIAGHSDVMAGVLAVKGE-------------KLAKEVYFLQNS-EGSGLAPFDCWLCLRGIK---T--MALRI 332 (464)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECSH-------------HHHHHHHHHHHH-TTCBCCHHHHHHHHHHHT---T--HHHHH
T ss_pred EEECCcccccCCCCCcEEEEEEChH-------------HHHHHHHHHHHh-cCCCCCHHHHHHHHhchh---h--HHHHH
Confidence 999999999865 5599999863 344444322110 012223322222223332 1 22233
Q ss_pred HHHHHHHHHHHHHHHhc---------------CCEEecCCC--CcceeeeeccCCCCc-HHHHHHhhcccCeEEcccc--
Q 010058 359 EQVLSNSSKFARSLLER---------------GYDLVSGGT--ENHLVLVNLRNKGID-GSRVEKVLESVHIAANKNT-- 418 (519)
Q Consensus 359 ~~~~~~~~~l~~~L~~~---------------g~~~~~~~~--~~~~~~v~~~~~~~~-~~~~~~~L~~~gI~v~~~~-- 418 (519)
++..++...+.+.|++. |+.+..+.. ...++++.+. +.+ ...+.+.|...||.++.+.
T Consensus 333 ~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~--~~~~~~~~~~~L~~~gi~v~~G~~~ 410 (464)
T 1ibj_A 333 EKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG--SVALSKHLVETTKYFSIAVSFGSVK 410 (464)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS--CHHHHHHHHHHCSSSEECSCCCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC--CHHHHHHHHHhcCcceEeecCCCCc
Confidence 44445555566666553 222222211 1235566652 222 2346667777888887432
Q ss_pred ----cCCC---CC---------CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 419 ----VPGD---VS---------AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 419 ----~p~~---~~---------~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.|+. .. ...++.||++++. +|++++++.|++++.
T Consensus 411 sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~--------edi~~li~~L~~al~ 460 (464)
T 1ibj_A 411 SLISMPCFMSHASIPAEVREARGLTEDLVRISAGI--------EDVDDLISDLDIAFK 460 (464)
T ss_dssp CEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS--------SCHHHHHHHHHHHHH
T ss_pred eeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--------CCHHHHHHHHHHHHh
Confidence 1110 00 0125689999764 689999999998875
No 208
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.83 E-value=4.1e-18 Score=178.12 Aligned_cols=340 Identities=12% Similarity=0.068 Sum_probs=196.9
Q ss_pred CeeecCC---CC--CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPS---EN--FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~---en--~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.|++.++ .+ ..+|.|.+|+.+.+.. . ++ .... .. .......+++++++++.+. . |++++|+
T Consensus 51 ~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~-~--~~-~~~~-~~----~~~~~~la~~l~~~~~~~~----~-v~~~~gg 116 (452)
T 3n5m_A 51 YLDGMSGLWCVNSGYGRKELAEAAYKQLQT-L--SY-FPMS-QS----HEPAIKLAEKLNEWLGGEY----V-IFFSNSG 116 (452)
T ss_dssp EEETTHHHHTCTTCBCCHHHHHHHHHHHTT-C--CC-CCTT-SE----EHHHHHHHHHHHHHHTSCE----E-EEEESSH
T ss_pred EEECCcchhhccCCCCCHHHHHHHHHHHHh-c--CC-cccc-cC----CHHHHHHHHHHHHhCCCCc----e-EEEeCch
Confidence 4666544 22 2479999999988865 2 12 1111 11 2333444588888888664 2 6666666
Q ss_pred H-HHHHHHHhhc-----C---CCCEEEEecCCCcccccccccccCCce-----eeeeeeeEEEeeeeCCCC---------
Q 010058 153 P-ANFQVYTALL-----K---PHERIMALDLPHGGHLSHGYQTDTKKI-----SAVSIFFETMPYRLDEST--------- 209 (519)
Q Consensus 153 ~-a~~~~~~all-----~---pGD~Vl~~~~~~~~~~~~~~~~~~~~v-----~~~g~~~~~v~~~~d~~~--------- 209 (519)
+ |+..++..+. . ++|+|++.+..+.+............. .-....+..++.+.....
T Consensus 117 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (452)
T 3n5m_A 117 SEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIY 196 (452)
T ss_dssp HHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGG
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhH
Confidence 5 9998888876 5 889999998776443211000000000 000001222222110000
Q ss_pred CCCCHHHHHHHhh---hhCCcEEEEccc--ccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-
Q 010058 210 GYIDYEQLEKSAA---LFRPKLIVAGAS--AYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE- 277 (519)
Q Consensus 210 ~~iD~d~l~~~i~---~~k~klIi~~~s--n~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~- 277 (519)
...++++|+++++ ..++++|++++. |+|...+ +++|+++|++||++||+|++|. |+...+.. ....+
T Consensus 197 ~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~~~~~~~~~ 275 (452)
T 3n5m_A 197 DVECVKEVDRVMTWELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVIC-GFGRTGKAFGFMNYDV 275 (452)
T ss_dssp GCHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcccccchhhhcCC
Confidence 0112899999987 236788888853 5665555 9999999999999999999976 22111110 00001
Q ss_pred CCeEEEEcCCCccc-C-CCcceEEeecccccccccCcchhhhHHHHhhh----c-ccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 278 YADVVTTTTHKSLR-G-PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ----A-VFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 278 ~~di~~~S~~K~l~-G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~----~-~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
..|++++| |+++ | +|.|++++++ ++.+.+.. . ...+...+.+....++..++++.+.
T Consensus 276 ~~di~t~s--K~l~~G~~~ig~~~~~~--------------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 339 (452)
T 3n5m_A 276 KPDIITMA--KGITSAYLPLSATAVKR--------------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIE 339 (452)
T ss_dssp CCSEEEEC--GGGGTTSSCCEEEEEEH--------------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEeec--ccccCCCcceEEEEECH--------------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 35788776 6653 6 6779999988 56665532 1 1111222334455555556676543
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc--C---CEEecCCCCcceeeeeccCCCC-----c---HHHHHHhhcccCeEEccc
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER--G---YDLVSGGTENHLVLVNLRNKGI-----D---GSRVEKVLESVHIAANKN 417 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~--g---~~~~~~~~~~~~~~v~~~~~~~-----~---~~~~~~~L~~~gI~v~~~ 417 (519)
. +.+.++++++.+++.+.|.+. + +..+.+ . ..+..+.+..... + ..++.+.|.+.||.+...
T Consensus 340 ~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 414 (452)
T 3n5m_A 340 N---ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRG-K-GLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRN 414 (452)
T ss_dssp H---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEE-S-SSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEEC
T ss_pred h---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEE-E-EEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeec
Confidence 2 344666777777777777654 2 222222 2 2344454422110 1 235677787899999743
Q ss_pred ccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 418 TVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 418 ~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
..+ .+..++.|||+++...+ ++|++++++.|++++.
T Consensus 415 ~~~---~~~~~~~iRi~~~~~~t----~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 415 GMT---TAGYNNILTLAPPLVIS----SEEIAFVIGTLKTAME 450 (452)
T ss_dssp TTS---STTCCCEEEECCCTTCC----HHHHHHHHHHHHHHHT
T ss_pred Ccc---cCCCCCEEEEECCCCCC----HHHHHHHHHHHHHHHH
Confidence 211 22336789999888888 8999999999998874
No 209
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.82 E-value=3.2e-19 Score=182.88 Aligned_cols=248 Identities=16% Similarity=0.113 Sum_probs=162.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+...+++ +++++++|.+. .+.++||+.|+..++.++++|||+|+++++.|++........ ....|..
T Consensus 59 ~~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~----~~~~g~~ 125 (389)
T 3acz_A 59 PTVEQFE----EMVCSIEGAAG-----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHW----LPRFGIE 125 (389)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHH----HHHTTCE
T ss_pred hHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCCE
Confidence 4455555 88889999873 488899988998899899999999999998887754432100 1122444
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSP 275 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p 275 (519)
+..++. .|++++++++++ ++++|+++ ++| +|...|+++|+++|+++|+++|+|++|..+.... |
T Consensus 126 ~~~v~~--------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~-----~ 191 (389)
T 3acz_A 126 VDLIDT--------SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLK-----P 191 (389)
T ss_dssp EEEECT--------TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-----G
T ss_pred EEEECC--------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccC-----c
Confidence 444331 489999999987 89999988 666 7899999999999999999999999987664311 1
Q ss_pred CC-CCeEEEEcCCCcccCCC---cceEEeecccccccccCcchhhhHHHHhhhccc-CCCCCCccHHHHHHHHHHHHHhc
Q 010058 276 FE-YADVVTTTTHKSLRGPR---GAMIFFRKGVKEINKQGQEVMYAYEDKINQAVF-PGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 276 ~~-~~di~~~S~~K~l~Gpr---gG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~-~~~~g~~~~~~iaal~~al~~~~ 350 (519)
+. ++|+++.|+||+++||. +|++++++. ++.+++..... .+ ++.+.....+ ++..+.
T Consensus 192 ~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~-------------~~~~~l~~~~~~~g--~~~~~~~~~~---~~~~l~ 253 (389)
T 3acz_A 192 LELGADIALHSVSKYINGHGDVIGGVSSAKTA-------------EDIATIKFYRKDAG--SLMAPMDAFL---CARGMK 253 (389)
T ss_dssp GGTTCSEEEEETTTTTTCSSCCCCEEEEESSH-------------HHHHHHHHHHHHHC--CCCCHHHHHH---HHHHHT
T ss_pred cccCCeEEEECChhhccCCCCceeEEEEECcH-------------HHHHHHHHHHHhcC--CCCCHHHHHH---HHcCcc
Confidence 22 68999999999998764 389998872 22333322211 11 1222222222 222222
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhcC-CE-EecCCC---------------CcceeeeeccCCCCcHHHHHHhhcccCeE
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLERG-YD-LVSGGT---------------ENHLVLVNLRNKGIDGSRVEKVLESVHIA 413 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-~~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~L~~~gI~ 413 (519)
.+....++..++++.+.+.|++.+ +. +..++- ...++.+.+. + ..++.+.|.+.||.
T Consensus 254 --~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--~--~~~~~~~l~~~~i~ 327 (389)
T 3acz_A 254 --TLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--S--FEAAKKLMEHLKVC 327 (389)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--S--HHHHHHHHTTCSSS
T ss_pred --HHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--C--HHHHHHHHHhCCCc
Confidence 244556777888999999998863 21 111110 0223333332 2 56678888888887
Q ss_pred Ecc
Q 010058 414 ANK 416 (519)
Q Consensus 414 v~~ 416 (519)
+..
T Consensus 328 ~~~ 330 (389)
T 3acz_A 328 TLA 330 (389)
T ss_dssp EEB
T ss_pred EEC
Confidence 754
No 210
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.82 E-value=4.4e-19 Score=185.97 Aligned_cols=337 Identities=10% Similarity=0.029 Sum_probs=193.6
Q ss_pred CeeecCC--CCC---CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPS--ENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~--en~---~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.|++.++ .+. .+|.|.+|+.+.+.+ ...+++..++ . +......+++++++++.+.+ .|++++|+
T Consensus 52 ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~-~~~~~~~~~~--~----~~~~~~la~~l~~~~~~~~~----~v~~~~gg 120 (459)
T 4a6r_A 52 IIDGMAGLWCVNVGYGRKDFAEAARRQMEE-LPFYNTFFKT--T----HPAVVELSSLLAEVTPAGFD----RVFYTNSG 120 (459)
T ss_dssp EEETTHHHHTCTTCBCCHHHHHHHHHHHHH-CSCCCTTSSS--C----CHHHHHHHHHHHHHSCTTCC----EEEEESSH
T ss_pred EEECCCchhcccCCCCCHHHHHHHHHHHHh-cccccccccc--C----CHHHHHHHHHHHHhCCCCCC----EEEEeCch
Confidence 4666544 222 479999999998865 2111221111 1 23334455888899987664 47777766
Q ss_pred H-HHHHHHHhhcC--------CCCEEEEecCCCcccccccccccC-----CceeeeeeeeEEEeeee--CCCCCCCC---
Q 010058 153 P-ANFQVYTALLK--------PHERIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETMPYRL--DESTGYID--- 213 (519)
Q Consensus 153 ~-a~~~~~~all~--------pGD~Vl~~~~~~~~~~~~~~~~~~-----~~v~~~g~~~~~v~~~~--d~~~~~iD--- 213 (519)
+ |+..++..+.+ ++|+|++.+..+.+.......... .........+..++++. ....+ +|
T Consensus 121 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~ 199 (459)
T 4a6r_A 121 SESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDE 199 (459)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHH
Confidence 5 99988888865 579999988766543211000000 00000011122333221 10112 45
Q ss_pred -----HHHHHHHhhh---hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC-C-CCC
Q 010058 214 -----YEQLEKSAAL---FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP-S-PFE 277 (519)
Q Consensus 214 -----~d~l~~~i~~---~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~-~-p~~ 277 (519)
+++|++.+.+ .++++|++.+.+ .|...+ +++|+++|++||++||+|++|. |+...+... . .++
T Consensus 200 ~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~G~~~~~~~~~ 278 (459)
T 4a6r_A 200 FGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVIC-GFGRTGEWFGHQHFG 278 (459)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcC
Confidence 7889988874 356778777544 344454 8999999999999999999975 222222100 0 000
Q ss_pred -CCeEEEEcCCCcccC--CCcceEEeecccccccccCcchhhhHHHHhhhc--ccCCCCCCccHHHHHHHHHHHHHhcCH
Q 010058 278 -YADVVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--VFPGLQGGPHNHTISGLAVALKQVKTP 352 (519)
Q Consensus 278 -~~di~~~S~~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~g~~~~~~iaal~~al~~~~~~ 352 (519)
..|++++| |+|+| +|.|++++++ ++.+.+... ...+...+.+....++..++++.+...
T Consensus 279 ~~pdi~t~s--K~l~gg~~~lg~v~~~~--------------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 342 (459)
T 4a6r_A 279 FQPDLFTAA--KGLSSGYLPIGAVFVGK--------------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDE 342 (459)
T ss_dssp CCCSEEEEC--GGGGTTSSCCEEEEECH--------------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCeeehh--hhhcCCCCCccceeeCH--------------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 35788776 88865 6889999988 555544311 000001122344445555567654322
Q ss_pred hHHHHHHHHH-HHHHHHHHHH----HhcC-CEEecCCCCcceeeeeccCCCC----------cHHHHHHhhcccCeEEcc
Q 010058 353 EYKAYQEQVL-SNSSKFARSL----LERG-YDLVSGGTENHLVLVNLRNKGI----------DGSRVEKVLESVHIAANK 416 (519)
Q Consensus 353 ~~~~~~~~~~-~~~~~l~~~L----~~~g-~~~~~~~~~~~~~~v~~~~~~~----------~~~~~~~~L~~~gI~v~~ 416 (519)
.+.++++ ++.+++.+.| .+.+ +..+.+ ...+..+.+..... ...++.+.|.+.||.++
T Consensus 343 ---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~- 416 (459)
T 4a6r_A 343 ---GIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRG--VGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMR- 416 (459)
T ss_dssp ---CHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEE--ETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECE-
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEE--EEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEe-
Confidence 3344555 5555555555 3332 223322 12344454432110 14567777888899997
Q ss_pred cccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 417 NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 417 ~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
|+ .+.|||+++...+ ++|++++++.|++++...
T Consensus 417 ---~~------g~~iRi~~~~~~t----~e~i~~~l~~l~~~l~~~ 449 (459)
T 4a6r_A 417 ---AC------GDHIVSAPPLVMT----RAEVDEMLAVAERCLEEF 449 (459)
T ss_dssp ---EE------TTEEEECCCTTCC----HHHHHHHHHHHHHHHHHH
T ss_pred ---cC------CCEEEEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 32 1689999988888 899999999999998754
No 211
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.82 E-value=3.9e-18 Score=178.47 Aligned_cols=334 Identities=11% Similarity=0.045 Sum_probs=202.5
Q ss_pred cCeeecCC--CC---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~--en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++.++ .+ ..+|.|.+|+.+.+.. . ++.....|. .+.. ...+++++++++.+.+ .|++++|
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~-~--~~~~~~~~~-~~~~----~~L~e~la~~~~~~~~----~v~~~~s 143 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRV-M--NHVMFGGLT-HEPA----ARLAKLLVDITPAGLD----TVFFSDS 143 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHH-C--SCCCSSSEE-CHHH----HHHHHHHHHHSSTTEE----EEEEESS
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHh-c--cCccccccC-CHHH----HHHHHHHHHhCCCCcC----EEEEeCc
Confidence 45666544 22 2489999999988865 2 111101111 1223 3444888899976653 4666665
Q ss_pred HH-HHHHHHHhhcC-------CCC-EEEEecCCCcccccccccc-c-----CCceeeeeeeeEEEeeeeCCCCCCCCHHH
Q 010058 152 SP-ANFQVYTALLK-------PHE-RIMALDLPHGGHLSHGYQT-D-----TKKISAVSIFFETMPYRLDESTGYIDYEQ 216 (519)
Q Consensus 152 s~-a~~~~~~all~-------pGD-~Vl~~~~~~~~~~~~~~~~-~-----~~~v~~~g~~~~~v~~~~d~~~~~iD~d~ 216 (519)
++ |+..++..+.. +|+ +|++++..+.+........ . ..........+..++++.+ .....|+++
T Consensus 144 GseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~ 222 (457)
T 3tfu_A 144 GSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAA 222 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS-SCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHH
Confidence 55 99988887764 555 7888776553332110000 0 0000000111233333322 112358899
Q ss_pred HHHHhhh--hCCcEEEEcc-cc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C-CCeEEE
Q 010058 217 LEKSAAL--FRPKLIVAGA-SA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E-YADVVT 283 (519)
Q Consensus 217 l~~~i~~--~k~klIi~~~-sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~-~~di~~ 283 (519)
|++++++ .++++|++.+ .+ .|...+ +++|+++|++||++||+|+++. |+...+.. ..+ + ..|+++
T Consensus 223 le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g~gr~G~~-~a~~~~~~~pdiit 300 (457)
T 3tfu_A 223 FEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIAT-GFGRTGAL-FAADHAGVSPDIMC 300 (457)
T ss_dssp HHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEEE
T ss_pred HHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCcc-CCccccch-hHhHhcCCCceEEE
Confidence 9999873 3678888876 33 454443 8999999999999999999965 32221110 000 0 358886
Q ss_pred EcCCCcccC--CCcceEEeecccccccccCcchhhhHHHHhhh---c-ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHH
Q 010058 284 TTTHKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ---A-VFPGLQGGPHNHTISGLAVALKQVKTPEYKAY 357 (519)
Q Consensus 284 ~S~~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~---~-~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~ 357 (519)
+| |+|+| +|.|++++++ ++.+.+.. . ...+...+.+....++..++++.+.+. .+
T Consensus 301 ~s--K~l~gG~~~lG~v~~~~--------------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~---~~ 361 (457)
T 3tfu_A 301 VG--KALTGGYLSLAATLCTA--------------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQ---DW 361 (457)
T ss_dssp EC--GGGGTTSSCCEEEEEEH--------------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTS---CH
T ss_pred EC--hhhhCCCcceEEEEEcH--------------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhh---HH
Confidence 65 89977 6889999988 56555531 1 111112233455555555667765443 45
Q ss_pred HHHHHHHHHHHHHHHHhc----CCEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEe
Q 010058 358 QEQVLSNSSKFARSLLER----GYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRM 433 (519)
Q Consensus 358 ~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 433 (519)
.+++.++.+++.+.|+++ ++..+.+ ...+.++.+.. +.+..++.+.|.+.||.++ |. .+.+||
T Consensus 362 ~~~~~~~~~~l~~~L~~l~~~~~v~~vr~--~G~~~~i~l~~-~~~~~~~~~~l~~~Gv~v~----~~------~~~lRi 428 (457)
T 3tfu_A 362 RTRITELAAGLTAGLDTARALPAVTDVRV--CGAIGVIECDR-PVDLAVATPAALDRGVWLR----PF------RNLVYA 428 (457)
T ss_dssp HHHHHHHHHHHHHHHGGGGGSTTEEEEEE--CSSCEEEEESS-CCCHHHHHHHHHHTTEECC----CB------TTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeeeeec--CCeEEEEEECC-cccHHHHHHHHHHCCeEEE----ec------CCEEEE
Confidence 677788888888888875 2222221 23355566543 3457788888888899996 32 258999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+++...+ ++|++++++.|++++..
T Consensus 429 ~p~~~~t----~eei~~~l~~L~~~l~~ 452 (457)
T 3tfu_A 429 MPPYICT----PAEITQITSAMVEVARL 452 (457)
T ss_dssp CCCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred ECCCCCC----HHHHHHHHHHHHHHHHH
Confidence 9888778 89999999999999864
No 212
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.82 E-value=1e-19 Score=186.67 Aligned_cols=322 Identities=12% Similarity=0.036 Sum_probs=197.6
Q ss_pred ccCeeecCCCCCC--cHHHHHHHhhHhhhccCCCCCCCCCCCCchhH-----HHHHHHHHHHHHHHcCCCCCCCcceEEe
Q 010058 76 WKGLELIPSENFT--SVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI-----DMAESLCQKRALDAFQLDPAKWGVNVQS 148 (519)
Q Consensus 76 ~~~i~L~a~en~~--~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~-----~~le~~~~~~~~~~~g~~~~~~~~~V~~ 148 (519)
.+.|+|..+++.. ++.+.+++.+.... ....+...|+...+. .++++.+.+++. ..|.+.+. ..+|++
T Consensus 22 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~---~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~-~~~i~~ 96 (391)
T 3bwn_A 22 DFVVNLDHGDPTAYEEYWRKMGDRCTVTI---RGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE-DRYIVV 96 (391)
T ss_dssp TSCEECSSCCCGGGHHHHHHTGGGSCEEE---CTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS-SSEEEE
T ss_pred CCeeEcCCCCCCCCCCHHHHHhHHHHhhc---CccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC-CCeEEE
Confidence 4568887776632 33455554332211 111222335555555 778877766665 45653211 026999
Q ss_pred CCcHH-HHHHHHHhhcCCCC----EEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh
Q 010058 149 LSGSP-ANFQVYTALLKPHE----RIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL 223 (519)
Q Consensus 149 ~sGs~-a~~~~~~all~pGD----~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~ 223 (519)
|+|++ ++..++.++++||| +|++.++.|.++... +...|..+..++ +|.++. + .
T Consensus 97 t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~--------~~~~g~~~~~~~--~d~~~l--~--------~- 155 (391)
T 3bwn_A 97 GTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEE--------TTYVRSGMYKWE--GDAWGF--D--------K- 155 (391)
T ss_dssp EEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHH--------HHTTCBTTEEEE--EESTTC--C--------C-
T ss_pred eCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHH--------HHHcCCeEEEec--CCHHHc--C--------C-
Confidence 99998 88889999999999 999999887766432 223344444443 443222 2 1
Q ss_pred hCCcEEEEc-ccc-ccccccHHHHHHHHhh-cC--CEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcc--cCCCcc
Q 010058 224 FRPKLIVAG-ASA-YARLYDYARIRKVCDK-QK--AVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL--RGPRGA 296 (519)
Q Consensus 224 ~k~klIi~~-~sn-~g~~~d~~~i~~ia~~-~~--~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l--~GprgG 296 (519)
.++|+|+++ ++| +|...+ +| |++ ++ +++|+|++|..+... .+. . ....++++.|+||++ +|+|.|
T Consensus 156 ~~~k~v~l~~p~NPtG~~~~--~l---~~~~~~~~~~ii~De~y~~~~~~-~l~-~-~~~~~i~~~S~SK~~g~~GlRiG 227 (391)
T 3bwn_A 156 KGPYIELVTSPNNPDGTIRE--TV---VNRPDDDEAKVIHDFAYYWPHYT-PIT-R-RQDHDIMLFTFSKITGHAGSRIG 227 (391)
T ss_dssp CSCEEEEEESSCTTTCCCCC--CC---C-----CCCEEEEECTTCSTTTS-CCC-C-CBCCSEEEEEHHHHHSCGGGCEE
T ss_pred CCCEEEEECCCCCCCchhHH--HH---HHHhhcCCCEEEEeCCCCCCCCC-ccc-c-CCCCeEEEEechhhcCCCccceE
Confidence 378999877 777 887775 34 444 55 999999998632110 000 0 114689999999976 588889
Q ss_pred eEEe-ecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc---------CHhHHHHHHHHHHHHH
Q 010058 297 MIFF-RKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK---------TPEYKAYQEQVLSNSS 366 (519)
Q Consensus 297 ~i~~-~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~---------~~~~~~~~~~~~~~~~ 366 (519)
|+++ ++ ++.+.+...... ...+++.....++..+++... ...+++.++++.++++
T Consensus 228 ~~~~~~~--------------~l~~~l~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
T 3bwn_A 228 WALVKDK--------------EVAKKMVEYIIV-NSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWE 292 (391)
T ss_dssp EEEECCH--------------HHHHHHHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHH
T ss_pred EEEecCH--------------HHHHHHHHHhcc-cccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHH
Confidence 9998 55 444444332110 012445555555666676432 3356888999999999
Q ss_pred HHHHHHHhc-CCEEecC-CC-----------CcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEe
Q 010058 367 KFARSLLER-GYDLVSG-GT-----------ENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRM 433 (519)
Q Consensus 367 ~l~~~L~~~-g~~~~~~-~~-----------~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 433 (519)
.+.+.|++. |+.+..+ ++ ...++|+.+.. ...+.+.|+++||.++ ||.......+++||
T Consensus 293 ~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~----~~~~~~~l~~~gV~v~----pg~~fg~~~~~iRi 364 (391)
T 3bwn_A 293 KLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKE----ETDLVSELRRHKVMSR----AGERCGSDKKHVRV 364 (391)
T ss_dssp HHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESS----SCCHHHHHHHTTEECE----EGGGGTCCTTEEEE
T ss_pred HHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCc----HHHHHHHHHHCCEEEc----cCCCCCCCCCEEEE
Confidence 999999988 6665432 11 11245666542 2457778888999997 44331113578999
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 434 GTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 434 ~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
++.. + +++++++++.|.++++
T Consensus 365 s~~~--~----~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 365 SMLS--R----EDVFNVFLERLANMKL 385 (391)
T ss_dssp ESCS--C----HHHHHHHHHHHHSCC-
T ss_pred EecC--C----HHHHHHHHHHHHHHHH
Confidence 9873 4 7899999999987764
No 213
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.81 E-value=1.1e-18 Score=180.93 Aligned_cols=158 Identities=17% Similarity=0.176 Sum_probs=117.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeeee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
+...+++ +++++++|.+. .|.++||+.|+..++.+++++||+|++.+..|++....+... ....|..
T Consensus 58 ~~~~~l~----~~la~~~g~~~-----~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~----~~~~g~~ 124 (421)
T 2ctz_A 58 PTVDVLE----KRLAALEGGKA-----ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVT----LKRLGIE 124 (421)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTH----HHHTTCE
T ss_pred hHHHHHH----HHHHHHhCCCc-----eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHH----HHHcCCE
Confidence 3445555 88889999863 489999977998899999999999999998888765543110 0112433
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhh-hhhccccCCCCC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAH-ISGLVAAGVIPS 274 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah-~~g~~~~~~~~~ 274 (519)
+..++ +. .|++++++++++ ++++|+++ ++| +|...|+++|+++|+++|+++|+|++| ..|... .
T Consensus 125 ~~~~~-~~------~d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~-----~ 191 (421)
T 2ctz_A 125 VRFTS-RE------ERPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL-----R 191 (421)
T ss_dssp EEECC-TT------CCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC-----C
T ss_pred EEEEC-CC------CCHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC-----C
Confidence 33330 22 189999999987 89999988 666 789999999999999999999999999 766421 1
Q ss_pred CCC-CCeEEEEcCCCcccCCCc--ceEEee
Q 010058 275 PFE-YADVVTTTTHKSLRGPRG--AMIFFR 301 (519)
Q Consensus 275 p~~-~~di~~~S~~K~l~Gprg--G~i~~~ 301 (519)
++. ++|++++|+||+++||.+ |++++.
T Consensus 192 ~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 192 PLAWGAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp GGGGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred ccccCCeEEEECCcccccCCCCcEEEEEEe
Confidence 222 589999999999987653 545443
No 214
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.81 E-value=9.6e-18 Score=176.44 Aligned_cols=328 Identities=10% Similarity=0.050 Sum_probs=194.1
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH-HHHHHHHHhhc---
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS-PANFQVYTALL--- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs-~a~~~~~~all--- 163 (519)
.+|.|.+|+.+.+.. ...+++. ....+ ......++++++++.+.+ .|++++|+ .|+..++..+.
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~---~~~~~----~~~~la~~l~~~~~~~~~----~v~~~~sGseA~~~Aik~a~~~~ 138 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPW---YMATS----PAARLAEKIATLTPGDLN----RIFFTTGGSTAVDSALRFSEFYN 138 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTT---TCBCH----HHHHHHHHHHTTSSTTCC----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccC---ccCCH----HHHHHHHHHHhcCCCCcC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 489999999998865 3112221 11222 333444888898876554 36666555 49998888875
Q ss_pred -----CCCCEEEEecCCCcccccccccccC-----CceeeeeeeeEEEeeeeCCCCCCCC--------HHHHHHHhhh--
Q 010058 164 -----KPHERIMALDLPHGGHLSHGYQTDT-----KKISAVSIFFETMPYRLDESTGYID--------YEQLEKSAAL-- 223 (519)
Q Consensus 164 -----~pGD~Vl~~~~~~~~~~~~~~~~~~-----~~v~~~g~~~~~v~~~~d~~~~~iD--------~d~l~~~i~~-- 223 (519)
..+++|++++..+.+.......... .........+..++++........| +++|++.+.+
T Consensus 139 ~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~ 218 (476)
T 3i5t_A 139 NVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG 218 (476)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC
Confidence 3367899888766443211000000 0000001112233322211111122 7889988874
Q ss_pred -hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC---CCCCC-CCeEEEEcCCCcccC
Q 010058 224 -FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI---PSPFE-YADVVTTTTHKSLRG 292 (519)
Q Consensus 224 -~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~---~~p~~-~~di~~~S~~K~l~G 292 (519)
.++++|++.+.+ .|...+ +++|+++|++||++||+|++|. |+...+.. ..-++ ..|++++| |+|+|
T Consensus 219 ~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~-g~gr~G~~~~~~~~~~v~pdi~t~s--K~l~~ 295 (476)
T 3i5t_A 219 PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVT-GFGRCGEWFASEKVFGVVPDIITFA--KGVTS 295 (476)
T ss_dssp GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHTTCCCCSEEEEC--GGGGT
T ss_pred CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccCceeeecccCCCcchhhhh--hhhcC
Confidence 356788888444 443333 8999999999999999999976 32221110 00011 35888776 88864
Q ss_pred --CCcceEEeecccccccccCcchhhhHHHHhhhc------ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHH
Q 010058 293 --PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSN 364 (519)
Q Consensus 293 --prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~ 364 (519)
++.|++++++ ++.+.+... ...+...+.+....+|..++++.+.+ +.+.+++.++
T Consensus 296 G~~plg~v~~~~--------------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~ 358 (476)
T 3i5t_A 296 GYVPLGGLAISE--------------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---EGIVDQAREM 358 (476)
T ss_dssp TSSCCEEEEECH--------------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHH
T ss_pred CCcCeEEEEECH--------------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---HHHHHHHHHH
Confidence 6779999988 566655432 11122223344555555567765532 3467788888
Q ss_pred HHHHHHHHHhcC-C---EEecCCCCcceeeeeccCCCC----------cHHHHHHhhcccCeEEcccccCCCCCCCCCCe
Q 010058 365 SSKFARSLLERG-Y---DLVSGGTENHLVLVNLRNKGI----------DGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430 (519)
Q Consensus 365 ~~~l~~~L~~~g-~---~~~~~~~~~~~~~v~~~~~~~----------~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 430 (519)
.+++.+.|++++ + ..+.+ ...+..+++..... ....+.+.|.+.||.++. . .+.
T Consensus 359 ~~~l~~~L~~l~~~~~v~~v~~--~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~------g~~ 426 (476)
T 3i5t_A 359 ADYFAAALASLRDLPGVAETRS--VGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRP----L------GDL 426 (476)
T ss_dssp HHHHHHHHHTTTTSTTEEEEEE--ETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEE----E------TTE
T ss_pred HHHHHHHHHHHhcCCCeEEEEe--cCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEe----c------CCE
Confidence 888888888652 2 22221 12344555533210 134566777788999962 1 268
Q ss_pred EEeccCccccCCCCHHHHHHHHHHHHHHHHHHh
Q 010058 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLAL 463 (519)
Q Consensus 431 iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~ 463 (519)
|||+++...+ ++|++++++.|++++....
T Consensus 427 iRi~p~l~~t----~e~i~~~l~~l~~~l~~~~ 455 (476)
T 3i5t_A 427 CVISPPLIIS----RAQIDEMVAIMRQAITEVS 455 (476)
T ss_dssp EEECCCTTCC----HHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCC----HHHHHHHHHHHHHHHHHHH
Confidence 9999888888 8999999999999987553
No 215
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.80 E-value=1.6e-18 Score=182.11 Aligned_cols=326 Identities=10% Similarity=0.038 Sum_probs=192.9
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcC--
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLK-- 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~-- 164 (519)
.+|.|.+|+.+.+.. ....+...++ .........++++++++.+.+ .|++++|++ |+..++..+..
T Consensus 72 ~~p~v~~A~~~~~~~-~~~~~~~~~~------~~~~~~~lae~l~~~~~~~~~----~v~~~~sGseA~~~aik~a~~~~ 140 (472)
T 3hmu_A 72 GRDELAEVAARQMRE-LPYYNTFFKT------THVPAIALAQKLAELAPGDLN----HVFFAGGGSEANDTNIRMVRTYW 140 (472)
T ss_dssp CCHHHHHHHHHHHHH-CSCCCSSSSE------ECHHHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccccccccc------CCHHHHHHHHHHHHhCCCCCC----EEEEeCCHHHHHHHHHHHHHHHH
Confidence 479999999998865 2111211111 122333444888888876553 466666555 99988888764
Q ss_pred ------CCCEEEEecCCCcccccccccccCCc-----eeeeeeeeEEEeeee--CCCCCCCC--------HHHHHHHhhh
Q 010058 165 ------PHERIMALDLPHGGHLSHGYQTDTKK-----ISAVSIFFETMPYRL--DESTGYID--------YEQLEKSAAL 223 (519)
Q Consensus 165 ------pGD~Vl~~~~~~~~~~~~~~~~~~~~-----v~~~g~~~~~v~~~~--d~~~~~iD--------~d~l~~~i~~ 223 (519)
++++|++++..+.+............ .. ....+..++++. ....+ .| +++|++.+++
T Consensus 141 ~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~-~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~ 218 (472)
T 3hmu_A 141 QNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSG-LIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILE 218 (472)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTC-CCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccC-CCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHh
Confidence 57889988866543321100000000 00 000123333221 10111 34 7888888863
Q ss_pred ---hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCCccc
Q 010058 224 ---FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKSLR 291 (519)
Q Consensus 224 ---~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K~l~ 291 (519)
.++++|++.+.+ .|...+ +++|+++|++||++||+|++|. |+...+..- ..++ ..|++++| |+|+
T Consensus 219 ~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~-gfgr~G~~~a~~~~~v~pdi~t~s--K~l~ 295 (472)
T 3hmu_A 219 LGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVIC-GFGRTGNWFGTQTMGIRPHIMTIA--KGLS 295 (472)
T ss_dssp HCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHHTCCCSEEEEC--GGGT
T ss_pred cCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-CCcccCccchhHHhCCCCceeeec--hhhh
Confidence 356788887544 455555 8999999999999999999975 221211100 0000 35888876 9887
Q ss_pred C--CCcceEEeecccccccccCcchhhhHHHHhhhcc-cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH-HHHHH
Q 010058 292 G--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAV-FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL-SNSSK 367 (519)
Q Consensus 292 G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~-~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~-~~~~~ 367 (519)
| ++.|++++++ ++.+.++... ..+...+.+....+|..++++.+.+ +.+.+++. ++.++
T Consensus 296 gg~~plG~v~~~~--------------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~~~~~~~ 358 (472)
T 3hmu_A 296 SGYAPIGGSIVCD--------------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVRNVAAPY 358 (472)
T ss_dssp TTSSCCEEEEEEH--------------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHTHHHH
T ss_pred cCCcceEEEEECH--------------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHH
Confidence 6 6789999988 6666553221 1111223344455555566765532 34567777 77888
Q ss_pred HHHHHHhc-C---CEEecCCCCcceeeeeccCCCC-----------cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEE
Q 010058 368 FARSLLER-G---YDLVSGGTENHLVLVNLRNKGI-----------DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432 (519)
Q Consensus 368 l~~~L~~~-g---~~~~~~~~~~~~~~v~~~~~~~-----------~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 432 (519)
+.+.|+++ . +..+.+ ...++.+.+..... ....+.+.|.+.||.++ |+ .+.||
T Consensus 359 l~~~L~~l~~~~~v~~vr~--~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~------g~~iR 426 (472)
T 3hmu_A 359 LKEKWEALTDHPLVGEAKI--VGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMR----HV------GDRMI 426 (472)
T ss_dssp HHHHHHGGGGSTTEEEEEE--ETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCE----EE------TTEEE
T ss_pred HHHHHHHHhcCCCeEEEEe--cCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEE----ec------CCEEE
Confidence 88888665 2 222221 12344455432100 14567777888899986 22 16899
Q ss_pred eccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
|+++...+ ++|++++++.|++++...
T Consensus 427 i~p~~~~t----~e~i~~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 427 ISPPLVIT----PAEIDEMFVRIRKSLDEA 452 (472)
T ss_dssp ECCCTTCC----HHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 99988888 899999999999988654
No 216
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.80 E-value=1.9e-17 Score=172.97 Aligned_cols=326 Identities=12% Similarity=0.066 Sum_probs=184.2
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcC--
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLK-- 164 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~-- 164 (519)
.+|.|.+|+.+.+... . .+... ....+ .....+++++++++.+.+ .|++++|++ |+..++.++..
T Consensus 61 ~~p~v~~A~~~~~~~~-~-~~~~~--~~~~~----~~~~la~~l~~~~~~~~~----~v~~~~sGseA~~~al~~~~~~~ 128 (448)
T 3dod_A 61 RKKELDDAIKKQLGKI-A-HSTLL--GMTNV----PATQLAETLIDISPKKLT----RVFYSDSGAEAMEIALKMAFQYW 128 (448)
T ss_dssp SCHHHHHHHHHHHTTC-S-CCCCS--SSEEH----HHHHHHHHHHHHSCTTEE----EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-c-Ccccc--ccCCH----HHHHHHHHHHHhCCCCCC----EEEEeCchHHHHHHHHHHHHHHH
Confidence 4799999999888652 1 11111 11122 333444888888876543 466666555 99988888765
Q ss_pred --CC----CEEEEecCCCcccccccccccCCceeee-----eeeeEEEeeeeCCCCCC-----------CCHHHHHHHhh
Q 010058 165 --PH----ERIMALDLPHGGHLSHGYQTDTKKISAV-----SIFFETMPYRLDESTGY-----------IDYEQLEKSAA 222 (519)
Q Consensus 165 --pG----D~Vl~~~~~~~~~~~~~~~~~~~~v~~~-----g~~~~~v~~~~d~~~~~-----------iD~d~l~~~i~ 222 (519)
+| |+|++++..+.+................ ...+..++++ +.+. .|+++|+++++
T Consensus 129 ~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~le~~l~ 205 (448)
T 3dod_A 129 KNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP---YVYRSESGDPDECRDQCLRELAQLLE 205 (448)
T ss_dssp HHTTCTTCCEEEEEC-----------------------------CEEECCC---CCTTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC---ccccCCccchhhhhHHHHHHHHHHHH
Confidence 55 9999998765443211110000000000 0012222221 1122 25889999887
Q ss_pred --hhCCcEEEEccc--c-cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCCCcc
Q 010058 223 --LFRPKLIVAGAS--A-YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTHKSL 290 (519)
Q Consensus 223 --~~k~klIi~~~s--n-~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~K~l 290 (519)
..++++|++.+. + .|...+ +++|+++|++||++||+|++|. |+...+.. . .-++ ..|++++| |++
T Consensus 206 ~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~a~~~~~~~~di~t~s--K~l 282 (448)
T 3dod_A 206 EHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVAT-GFGRTGKMFACEHENVQPDLMAAG--KGI 282 (448)
T ss_dssp HHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGG
T ss_pred hCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcccchhhhhhcCCCCCEEEec--ccc
Confidence 235677877743 3 454444 8999999999999999999976 22211110 0 0001 35788766 888
Q ss_pred c-C-CCcceEEeecccccccccCcchhhhHHHHhhhc------ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH
Q 010058 291 R-G-PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362 (519)
Q Consensus 291 ~-G-prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~ 362 (519)
+ | .+.|++++++ ++.+.+... ...+...+.+....++..++++.+.. +.+.++++
T Consensus 283 ~~G~~~ig~v~~~~--------------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~ 345 (448)
T 3dod_A 283 TGGYLPIAVTFATE--------------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES---ENIVEQVA 345 (448)
T ss_dssp GTTSSCCEEEEEEH--------------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHH
T ss_pred cCCcCceEEEEECH--------------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc---ccHHHHHH
Confidence 5 4 3779999988 566655430 11112223345555555667765432 23455666
Q ss_pred HHHHHHHHHHHhc-CCEEecC-CCCcceeeeeccCCCCc----------HHHHHHhhcccCeEEcccccCCCCCCCCCCe
Q 010058 363 SNSSKFARSLLER-GYDLVSG-GTENHLVLVNLRNKGID----------GSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430 (519)
Q Consensus 363 ~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~v~~~~~~~~----------~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 430 (519)
++.+++.+.|.++ ++..+.. .....+.++.+.....+ ..++.+.|.+.||.+. |+ .+.
T Consensus 346 ~~~~~~~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~------~~~ 415 (448)
T 3dod_A 346 EKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTR----PL------GDV 415 (448)
T ss_dssp HHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECC----EE------TTE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEe----cc------CCE
Confidence 6666666666553 2211111 01223555555331110 3567777878899986 33 268
Q ss_pred EEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 431 iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
|||+++...+ ++|++++++.|++++...
T Consensus 416 iRi~~~~~~t----~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 416 IAFLPPLAST----AEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp EEECCCTTCC----HHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 9999887777 899999999999998754
No 217
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.80 E-value=4.4e-17 Score=169.31 Aligned_cols=327 Identities=11% Similarity=0.058 Sum_probs=190.2
Q ss_pred ccCeeecCCC--C---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 010058 76 WKGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~e--n---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s 150 (519)
+..|++.++- + ..+|.|.+|+.+.+.+....+| . .+...++ +++++++++ +.+ .|++++
T Consensus 55 ~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~------~-~~~~~~l----~~~la~~~~-~~~----~v~~~~ 118 (434)
T 3l44_A 55 NKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGT------P-TALEVKF----AKMLKEAMP-ALD----KVRFVN 118 (434)
T ss_dssp CEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSS------C-CHHHHHH----HHHHHHHCT-TCS----EEEEES
T ss_pred CEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCC------C-CHHHHHH----HHHHHHhCC-CCC----EEEEeC
Confidence 3456665543 2 2489999999988876221111 1 2233333 377888886 443 466666
Q ss_pred cHH-HHHHHHHhhcC--CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCC-------CC----CCCHHH
Q 010058 151 GSP-ANFQVYTALLK--PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDES-------TG----YIDYEQ 216 (519)
Q Consensus 151 Gs~-a~~~~~~all~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~-------~~----~iD~d~ 216 (519)
|++ |+..++..+.. ++|+|++++..+.+...... ...|........+.... +. .-|+++
T Consensus 119 sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 191 (434)
T 3l44_A 119 SGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVL-------VAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVET 191 (434)
T ss_dssp SHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGG-------BC-------CCCBSSTTCCHHHHTTEEEECTTCHHH
T ss_pred chHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHH-------hhcCCcccccCCCCcCCCCCcCCCceEecCcccHHH
Confidence 555 88888877654 78999998866544322111 11111111000000000 00 018999
Q ss_pred HHHHhhh--hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEc
Q 010058 217 LEKSAAL--FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTT 285 (519)
Q Consensus 217 l~~~i~~--~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S 285 (519)
+++++++ .++++|++++.+ .|...+ +++|+++|++||++||+|++|. |+ ..+... ..++ ..|++++|
T Consensus 192 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g~-~~g~~~~~~~~~~~~di~t~s 269 (434)
T 3l44_A 192 LKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-AF-RFMYGGAQDLLGVTPDLTALG 269 (434)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TT-TSSSSCHHHHHTCCCSEEEEE
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-ce-eccccHHHHHcCCCCCeeehh
Confidence 9998874 256778887554 455565 9999999999999999999985 33 221100 0000 35788776
Q ss_pred CCCcc-cCCCcceEEeecccccccccCcchhhhHHHHhhhc--ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH
Q 010058 286 THKSL-RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362 (519)
Q Consensus 286 ~~K~l-~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~ 362 (519)
|++ +|+|.|++++++ ++.+.+... ...+...+.+....++..++++.+.. +++.+++.
T Consensus 270 --K~~~~G~~iG~~~~~~--------------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~ 330 (434)
T 3l44_A 270 --KVIGGGLPIGAYGGKK--------------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLD 330 (434)
T ss_dssp --GGGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHH
T ss_pred --hhhcCCcCeeeEEEcH--------------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHH
Confidence 766 567779998887 555544331 11222234455556666667776654 34456666
Q ss_pred HHHHHHHHHHHhc----CCEEecCCCCcceeeeeccCCCC------------cHHHHHHhhcccCeEEcccccCCCCCCC
Q 010058 363 SNSSKFARSLLER----GYDLVSGGTENHLVLVNLRNKGI------------DGSRVEKVLESVHIAANKNTVPGDVSAM 426 (519)
Q Consensus 363 ~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~~------------~~~~~~~~L~~~gI~v~~~~~p~~~~~~ 426 (519)
++++++.+.|.+. ++..... ....++++.+..... ...++.+.|.+.||.++ |+.
T Consensus 331 ~~~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~---- 401 (434)
T 3l44_A 331 ELGATLEKGILEQAAKHNIDITLN-RLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLA----PSK---- 401 (434)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEE-EETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECC----SST----
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEE-eeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEe----ecC----
Confidence 6777777766653 4321111 123455555432211 12557777888899986 332
Q ss_pred CCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 427 VPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 427 ~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
.+.+|++ ...+ ++|++++++.|++++...
T Consensus 402 -~~~~rl~--~~~t----~e~i~~~l~~l~~~l~~~ 430 (434)
T 3l44_A 402 -YEAWFLT--TEHT----KEDIEYTIEAVGRAFAAL 430 (434)
T ss_dssp -TCCEECC--TTCC----HHHHHHHHHHHHHHHHHH
T ss_pred -CCcEEEe--cccC----HHHHHHHHHHHHHHHHHH
Confidence 2468985 3455 899999999999998753
No 218
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.80 E-value=1.7e-19 Score=185.04 Aligned_cols=312 Identities=10% Similarity=0.085 Sum_probs=187.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCC----CCEEEEecCCCcccccccccccCCcee
Q 010058 118 EYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKP----HERIMALDLPHGGHLSHGYQTDTKKIS 192 (519)
Q Consensus 118 ~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~p----GD~Vl~~~~~~~~~~~~~~~~~~~~v~ 192 (519)
.....+++.+..++.+++|+.... ...+++|++ ++.+++++.+++ |+.|+++...|.+... .+.
T Consensus 94 ~~~~~~e~~~~~~~~~~lGlp~~~---~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~k--------Al~ 162 (450)
T 3bc8_A 94 SLLNKITNSLVLNVIKLAGVHSVA---SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMV 162 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCc---eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHH--------HHH
Confidence 345678888889999999997542 345566655 444444444443 8999988766655543 555
Q ss_pred eeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhhC--CcE-EEEcccccc--ccccHHHHHHHHhhcCCEEEehhhhhhhcc
Q 010058 193 AVSIFFETMPYRLDESTGYIDYEQLEKSAALFR--PKL-IVAGASAYA--RLYDYARIRKVCDKQKAVMLADMAHISGLV 267 (519)
Q Consensus 193 ~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~k--~kl-Ii~~~sn~g--~~~d~~~i~~ia~~~~~~livD~ah~~g~~ 267 (519)
+.|...+.++...+++.+.+|+++|++++.++. .++ |+.++++|| ...|+++|+++|++||++++||+||.....
T Consensus 163 l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~ 242 (450)
T 3bc8_A 163 TAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSS 242 (450)
T ss_dssp HTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH
T ss_pred HcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhh
Confidence 677777777554444567899999999998743 234 444466676 689999999999999999999999875322
Q ss_pred cc-CCCCCCC--CCCeEEEEcCCCcccCCCc-ceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHH
Q 010058 268 AA-GVIPSPF--EYADVVTTTTHKSLRGPRG-AMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLA 343 (519)
Q Consensus 268 ~~-~~~~~p~--~~~di~~~S~~K~l~Gprg-G~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~ 343 (519)
.. .+....+ +++|+++.|+|||+..|-+ +++++++. +..+.+.. .+++.+.+.+ . ..++
T Consensus 243 ~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~-------------~~~~~~~~-~~~g~~s~Sp--s-L~l~ 305 (450)
T 3bc8_A 243 KCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE-------------PFIQDISK-MYPGRASASP--S-LDVL 305 (450)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH-------------HHHHHHHH-HSCSCBCSHH--H-HHHH
T ss_pred hhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH-------------HHHHHHHH-HhhcCCcccH--H-HHHH
Confidence 11 1111112 3799999999999999977 56666653 44444433 2444332221 1 2233
Q ss_pred HHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----CCEEecCCCCcceeeeeccC----CCCcHHHHHHhhccc---Ce
Q 010058 344 VALKQVKTPEYKAYQEQVLSNSSKFARSLLER----GYDLVSGGTENHLVLVNLRN----KGIDGSRVEKVLESV---HI 412 (519)
Q Consensus 344 ~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~L~~~---gI 412 (519)
..+......++.+..++..++++++++.|+++ |+.++.......-..+.+.. .+.+...+.-.+... |.
T Consensus 306 ~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~ 385 (450)
T 3bc8_A 306 ITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGA 385 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccc
Confidence 34333344567778888888999999988664 66665421110011121111 122333443333322 33
Q ss_pred EEccc----ccC-------CCC-CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 413 AANKN----TVP-------GDV-SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 413 ~v~~~----~~p-------~~~-~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+-.. .+. +.. .-....+|=+. .+.|.+++|++++++.|+++...
T Consensus 386 ~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~----~sig~~~~di~~l~~~L~~~~~~ 442 (450)
T 3bc8_A 386 RAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAA----AAIGMKMQDVDLFIKRLDKCLNI 442 (450)
T ss_dssp EEECSCCEEEETTEEEETTTTTSSCCSSCEEEEE----CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eeeecccccchhHHHHHHcCCeeecCCCCcEEEE----ecCCCCHHHHHHHHHHHHHHHHH
Confidence 32200 000 000 11112344333 34566699999999999998754
No 219
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.79 E-value=4.9e-18 Score=174.51 Aligned_cols=214 Identities=17% Similarity=0.116 Sum_probs=144.2
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEecCCCcccccccccccCCceeeeee
Q 010058 117 NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSI 196 (519)
Q Consensus 117 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~ 196 (519)
++...+++ +++++++|.+. .+.++||+.|+.+ +.++++|||+|++.+..|++........ .....|.
T Consensus 66 ~p~~~~l~----~~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~---~~~~~g~ 132 (400)
T 3nmy_A 66 NPTRFAYE----RCVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERV---RRRTAGL 132 (400)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHT---HHHHHCC
T ss_pred CHHHHHHH----HHHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHh---hHhhcCe
Confidence 35556666 78888999763 4888999778885 6788999999999998887654322110 0111244
Q ss_pred eeEEEeeeeCCCCCCCCHHHHHHHhhhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCC
Q 010058 197 FFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPS 274 (519)
Q Consensus 197 ~~~~v~~~~d~~~~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~ 274 (519)
.+..++ . -|++++++++++ ++++|+++ ++| +|...|+++|+++|+++|+++|+|+++..+....... .
T Consensus 133 ~~~~v~--~------~d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~-~ 202 (400)
T 3nmy_A 133 DFSFVD--L------TDPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLS-L 202 (400)
T ss_dssp EEEEEC--T------TSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGG-G
T ss_pred EEEEEC--C------CCHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhh-c
Confidence 343332 2 189999999987 89999988 666 7899999999999999999999999987654432111 1
Q ss_pred CCCCCeEEEEcCCCcccCC---Ccc-eEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 275 PFEYADVVTTTTHKSLRGP---RGA-MIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 275 p~~~~di~~~S~~K~l~Gp---rgG-~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
++|+++.|++|+++|+ .+| +++++++ ++.+++....... ..+.+... .+.++..+.
T Consensus 203 ---g~div~~S~sK~l~g~g~~~gG~~vv~~~~-------------~~~~~l~~~~~~~-g~~~~~~~---a~~~l~~l~ 262 (400)
T 3nmy_A 203 ---GADLVVHSATKYLNGHSDMVGGIAVVGDNA-------------ELAEQMAFLQNSI-GGVQGPFD---SFLALRGLK 262 (400)
T ss_dssp ---TCSEEEEETTTTTTCSSSCCCEEEEECSCH-------------HHHHHHHHHHHHH-CCBCCHHH---HHHHHHHHT
T ss_pred ---CCcEEEecCccccCCCCCcceeEEEEeCCH-------------HHHHHHHHHHHhc-CCCCCHHH---HHHHHHhHh
Confidence 6899999999999877 457 5665543 4444333211110 11222211 122233332
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 351 TPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
.+....++..++++.+.+.|++.
T Consensus 263 --~l~~r~~~~~~~a~~l~~~L~~~ 285 (400)
T 3nmy_A 263 --TLPLRMRAHCENALALAQWLETH 285 (400)
T ss_dssp --THHHHHHHHHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHHHHHHHHHHHHHcC
Confidence 25667788899999999999887
No 220
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.79 E-value=4.3e-17 Score=169.03 Aligned_cols=323 Identities=13% Similarity=0.080 Sum_probs=187.9
Q ss_pred cCeeecCCC--CC---CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSE--NF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~e--n~---~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++.++- ++ .+|.|.+|+.+.+.... .| . | . +......+++++++++ +.+ +|.+++|
T Consensus 53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~---~-~-~----~~~~~~la~~l~~~~~-~~~----~v~~~~g 116 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT--SF---G-A-P----CALENVLAEMVNDAVP-SIE----MVRFVNS 116 (427)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS--CC---S-S-C----CHHHHHHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCchhhhccCCCCHHHHHHHHHHHHhCC--Cc---C-C-C----CHHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 356766553 22 48999999998876521 11 0 1 1 2233444588888887 443 4777766
Q ss_pred HH-HHHHHHHhh--cCCCCEEEEecCCCcccccccccccCCceee------ee------eeeEEEeeeeCCCCCCCCHHH
Q 010058 152 SP-ANFQVYTAL--LKPHERIMALDLPHGGHLSHGYQTDTKKISA------VS------IFFETMPYRLDESTGYIDYEQ 216 (519)
Q Consensus 152 s~-a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~------~g------~~~~~v~~~~d~~~~~iD~d~ 216 (519)
++ |+..++... ...+++|++++..+.+............+.. .| ..+..+ +. -|+++
T Consensus 117 gsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~d~~~ 188 (427)
T 3fq8_A 117 GTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTT--PY------NDLEA 188 (427)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEE--ET------TCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeec--CC------CCHHH
Confidence 65 888777432 2345788887766544322111000000000 00 001111 11 18999
Q ss_pred HHHHhhhh--CCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEc
Q 010058 217 LEKSAALF--RPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTT 285 (519)
Q Consensus 217 l~~~i~~~--k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S 285 (519)
++++++++ ++++|++++.+ .|...+ +++|+++|++||++||+|++|. |+ ..+... ..+. ..|++++|
T Consensus 189 le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~t~s 266 (427)
T 3fq8_A 189 VKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFGVTPDLTTLG 266 (427)
T ss_dssp HHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTTCCCSEEEEC
T ss_pred HHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcCCCCChhhhh
Confidence 99999763 67788888544 566777 9999999999999999999986 44 221100 0001 35777766
Q ss_pred CCCccc-CCCcceEEeecccccccccCcchhhhHHHHhhhc--ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHH
Q 010058 286 THKSLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVL 362 (519)
Q Consensus 286 ~~K~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~ 362 (519)
|+++ |.|.|++++++ ++.+.+... ...+...+.+....++..++++.+..+ .+.++++
T Consensus 267 --K~~~~G~~~G~~~~~~--------------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~---~~~~~~~ 327 (427)
T 3fq8_A 267 --KIIGGGLPVGAYGGKR--------------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQP---GTYEYLD 327 (427)
T ss_dssp --GGGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTST---THHHHHH
T ss_pred --hhhhCCcceEEEEEcH--------------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHH
Confidence 8874 66789999887 555544321 111111233556666666777766543 3456666
Q ss_pred HHHHHHHHHHHhc----CCEEecCCCCcceeeeeccCCCCc------------HHHHHHhhcccCeEEcccccCCCCCCC
Q 010058 363 SNSSKFARSLLER----GYDLVSGGTENHLVLVNLRNKGID------------GSRVEKVLESVHIAANKNTVPGDVSAM 426 (519)
Q Consensus 363 ~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~L~~~gI~v~~~~~p~~~~~~ 426 (519)
++++++.+.|.+. ++.....+ ...+.++.+...... ..++.+.|.+.||.++ |+.
T Consensus 328 ~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~----~~~---- 398 (427)
T 3fq8_A 328 QITKRLSDGLLAIAQETGHAACGGQ-VSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLA----PSQ---- 398 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEE-ETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECC----SST----
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEE-eeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEe----cCC----
Confidence 6777777666653 33221111 233455554332211 3467777888999986 332
Q ss_pred CCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 427 VPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 427 ~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
.. |+..+...+ ++|++++++.|++++.
T Consensus 399 -~~--r~~~~~~~t----~e~i~~~l~~l~~~l~ 425 (427)
T 3fq8_A 399 -FE--AGFTSLAHT----EEDIDATLAAARTVMS 425 (427)
T ss_dssp -TS--CEECCTTCC----HHHHHHHHHHHHHHHH
T ss_pred -CC--CEEeeCcCC----HHHHHHHHHHHHHHHH
Confidence 12 444445566 8999999999998875
No 221
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.79 E-value=2.4e-18 Score=174.10 Aligned_cols=307 Identities=12% Similarity=0.130 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceEEeCCcHH-HHHHHHHhhcCC---C-CEEEEecCCCcccccccccccCCceeeeeee
Q 010058 123 AESLCQKRALDAFQLDPAKWGVNVQSLSGSP-ANFQVYTALLKP---H-ERIMALDLPHGGHLSHGYQTDTKKISAVSIF 197 (519)
Q Consensus 123 le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~-a~~~~~~all~p---G-D~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~ 197 (519)
-+..+.+|++.+ |+.... ..++++|++ ++++++++.+++ | |+|+++...|-+.+. .+.+.|..
T Consensus 118 tn~l~ld~L~~~-G~~~~~---~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~k--------AliL~Gl~ 185 (501)
T 3hl2_A 118 TNSLVLDIIKLA-GVHTVA---NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFK--------SMITAGFE 185 (501)
T ss_dssp HHHHHHHHHHHT-TCTTCC---EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHH--------HHHHTTCE
T ss_pred HHHHHHHHHHHc-CCCCCC---cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHH--------HHHHcCCe
Confidence 345567788766 997542 578888888 777777777764 4 999998866666554 56677888
Q ss_pred eEEEeeeeCCCCCCCCHHHHHHHhhhhCCc--EEEEc-ccccc--ccccHHHHHHHHhhcCCEEEehhhhhhhcccc-CC
Q 010058 198 FETMPYRLDESTGYIDYEQLEKSAALFRPK--LIVAG-ASAYA--RLYDYARIRKVCDKQKAVMLADMAHISGLVAA-GV 271 (519)
Q Consensus 198 ~~~v~~~~d~~~~~iD~d~l~~~i~~~k~k--lIi~~-~sn~g--~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~-~~ 271 (519)
+..++..++++...+|+++++++++++.++ ++++. ++.|+ ...|+++|+++|++||++++||+||..-.... .+
T Consensus 186 Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~l 265 (501)
T 3hl2_A 186 PVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHL 265 (501)
T ss_dssp EEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHH
T ss_pred EEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhh
Confidence 777776666566789999999999886433 33333 55554 45899999999999999999999986543221 11
Q ss_pred CCCCCC-C-CeEEEEcCCCcccCCCcceE-EeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHH
Q 010058 272 IPSPFE-Y-ADVVTTTTHKSLRGPRGAMI-FFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQ 348 (519)
Q Consensus 272 ~~~p~~-~-~di~~~S~~K~l~GprgG~i-~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~ 348 (519)
..+.+. + +|+++.|+||++..|-||.+ +++++ ++.+++.. .+|+.++ ....+.+..++..
T Consensus 266 p~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~-------------e~l~~~~~-~yPGr~S---~Spsldl~~tLL~ 328 (501)
T 3hl2_A 266 IQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND-------------SFIQEISK-MYPGRAS---ASPSLDVLITLLS 328 (501)
T ss_dssp HHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH-------------HHHHHHHH-TSCSCBC---SHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcEEEecccccceeecCceEEEeCCH-------------HHHHHHHH-hCCCCCC---CcHHHHHHHHHHH
Confidence 111111 3 99999999999988877644 46654 55555533 4566552 2223334455666
Q ss_pred hcCHhHHHHHHHHHHHHHHHHHHHHhc----CCEEecCCCCcce-eeeeccCC----CCcHHHHHHhhcccCeEEccccc
Q 010058 349 VKTPEYKAYQEQVLSNSSKFARSLLER----GYDLVSGGTENHL-VLVNLRNK----GIDGSRVEKVLESVHIAANKNTV 419 (519)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~-~~v~~~~~----~~~~~~~~~~L~~~gI~v~~~~~ 419 (519)
+...+|+++.++..+++++|.+.|+++ |-+++.. ..|.. .-+.+... +.+..++-..|-..+|.-.....
T Consensus 329 lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~-~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~ 407 (501)
T 3hl2_A 329 LGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHT-PHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVP 407 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCC-TTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCC-CCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeec
Confidence 667789999999999999999999886 5455432 11222 22333322 11233455556544432111001
Q ss_pred CCCC---------------CCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHHh
Q 010058 420 PGDV---------------SAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLAL 463 (519)
Q Consensus 420 p~~~---------------~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~~ 463 (519)
+++. ......++-+. ...|++.+|++.+++.|++++....
T Consensus 408 ~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a----~aiG~~~~~v~~~~~~l~~~~~~~~ 462 (501)
T 3hl2_A 408 LGSMQTVSGYTFRGFMSHTNNYPCAYLNAA----SAIGMKMQDVDLFIKRLDRCLKAVR 462 (501)
T ss_dssp TTCCEEETTEEESSTTTTSSCCSSCEEEEE----CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEECCeeecCcccCCCCCCchHHHHH----HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 2221 11112233332 2368889999999999999998654
No 222
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.78 E-value=3.3e-19 Score=185.02 Aligned_cols=322 Identities=11% Similarity=-0.015 Sum_probs=200.0
Q ss_pred cCeeecCCCCCC--cHHHHHHHhhHhhhccCC--CCCCCCCCCCchhHHHHHHHHHHHHHHHcCC--CCCCCcceEEeCC
Q 010058 77 KGLELIPSENFT--SVSVMQAVGSVMTNKYSE--GYPGARYYGGNEYIDMAESLCQKRALDAFQL--DPAKWGVNVQSLS 150 (519)
Q Consensus 77 ~~i~L~a~en~~--~~~V~ea~~~~l~~~~~~--g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~V~~~s 150 (519)
..|+|..+++.. ++.+.+++.+.+...-.. +|+... + |.....++++.+.+++.+..+. ++ .+|++++
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~-~-G~~~~~~lr~aia~~~~~~~~~~~~~----~~iv~t~ 130 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNP-V-SNFISFELEKTIKELHEVVGNAAAKD----RYIVFGV 130 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSS-C-CTTCCHHHHHHHHHHHHHHTCBCCTT----CEEEEES
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCC-C-CccchHHHHHHHHHHHHHhCCcCCCC----CEEEEeC
Confidence 357888777753 457777777666321001 133221 0 1111567887777777665543 44 3699999
Q ss_pred cHH-HHHHHHHhh--------cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHh
Q 010058 151 GSP-ANFQVYTAL--------LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSA 221 (519)
Q Consensus 151 Gs~-a~~~~~~al--------l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i 221 (519)
|++ ++..++.++ ++|||+|+++++.|.++... +...|..+. . +.+|+++|++++
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~--------~~~~g~~~~--~-------~~~d~~~l~~~~ 193 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQ--------TKYFDKKGY--V-------WAGNAANYVNVS 193 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHH--------HHHSCBTTE--E-------EEEEGGGGTTCS
T ss_pred CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHH--------HHHcCCeee--e-------ecCCHHHHHHhh
Confidence 998 888899999 99999999999877665432 222232221 1 235667777777
Q ss_pred hhhCCcEEEEc-ccc-ccccccHHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCCCCeEEEEcCCCcc--cCCCcce
Q 010058 222 ALFRPKLIVAG-ASA-YARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSL--RGPRGAM 297 (519)
Q Consensus 222 ~~~k~klIi~~-~sn-~g~~~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~~~di~~~S~~K~l--~GprgG~ 297 (519)
++ ++|+|+++ ++| +|...+ + +++ ++..+.|++++..... ....+ ...+++++|+||.+ +|.|.|+
T Consensus 194 ~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s--~~~~~-~~~~i~~~S~SK~~g~~G~RiG~ 262 (427)
T 2hox_A 194 NP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYT--PIKYK-ADEDILLFTMSKFTGHSGSRFGW 262 (427)
T ss_dssp CG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTS--CCCSC-BCCSEEEEEHHHHTSCGGGCCEE
T ss_pred cC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCC--ccccC-CCceEEEEeChhcCCCCCceEEE
Confidence 65 78988887 777 888888 3 333 5678888876421111 00000 25789999999976 6788899
Q ss_pred EEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHh----------cCHhHHHHHHHHHHHHHH
Q 010058 298 IFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQV----------KTPEYKAYQEQVLSNSSK 367 (519)
Q Consensus 298 i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~----------~~~~~~~~~~~~~~~~~~ 367 (519)
++++++ ++.+.+.........+. +.....++..+|+.. ....+++.+++++++++.
T Consensus 263 ~~~~~~-------------~l~~~l~~~~~~~~~~~-~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
T 2hox_A 263 ALIKDE-------------SVYNNLLNYMTKNTEGT-PRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVN 328 (427)
T ss_dssp EEECCH-------------HHHHHHHHHHHHHTSSC-CHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHH
T ss_pred EEECCH-------------HHHHHHHHHHHhcCCCC-CHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHH
Confidence 999532 45554443322211233 333333344455532 122346677888999999
Q ss_pred HHHHHHhc-CCEE--ec-C----------CCCcceeeeeccCCCCcHHHHH-HhhcccCeEEcccccCCCC-CCCCCCeE
Q 010058 368 FARSLLER-GYDL--VS-G----------GTENHLVLVNLRNKGIDGSRVE-KVLESVHIAANKNTVPGDV-SAMVPGGI 431 (519)
Q Consensus 368 l~~~L~~~-g~~~--~~-~----------~~~~~~~~v~~~~~~~~~~~~~-~~L~~~gI~v~~~~~p~~~-~~~~~~~i 431 (519)
+.+.|++. |+.+ +. + +....++|+++.. +..++. .+|++.||.++ ||.. +. .++++
T Consensus 329 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~---~~~~~~~~ll~~~gI~v~----pg~~f~~-~~~~~ 400 (427)
T 2hox_A 329 ITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW---EEDKDCYQTFQNGRINTQ----NGVGFEA-SSRYV 400 (427)
T ss_dssp HHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS---GGGCSHHHHHHHTTEECE----EGGGGTS-CTTEE
T ss_pred HHHHHHhCcCccccccccccccccccccCCCCceEEEEECCC---cHHHHHHHHHHHCCEEEc----CCCccCC-CCCEE
Confidence 99999988 7765 21 1 1124566777643 333444 44568999997 4433 22 46789
Q ss_pred EeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 432 RMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 432 Ri~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
||++.. + ++++++.++.|.+++.
T Consensus 401 Ris~~~--~----~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 401 RLSLIK--T----QDDFDQLMYYLKDMVK 423 (427)
T ss_dssp EEECSS--C----HHHHHHHHHHHHHHHT
T ss_pred EEEecC--C----HHHHHHHHHHHHHHHh
Confidence 999873 4 7889999999888764
No 223
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.78 E-value=6.4e-18 Score=176.59 Aligned_cols=320 Identities=11% Similarity=0.074 Sum_probs=189.6
Q ss_pred CcHHHH-H-HHhh---HhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcC-CCCCCCcceEEeCCcHH-HHHHHHH
Q 010058 88 TSVSVM-Q-AVGS---VMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQ-LDPAKWGVNVQSLSGSP-ANFQVYT 160 (519)
Q Consensus 88 ~~~~V~-e-a~~~---~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g-~~~~~~~~~V~~~sGs~-a~~~~~~ 160 (519)
.+|.|. + |+.+ .+... .+.+.+ |. .+... ..+++++++++ .+.+ +|.+++|++ |+..++.
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~---~~~~~~-~~-~~~~~----~la~~la~~~~~~~~~----~v~~~~~gseA~~~aik 137 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALN---KPSNSD-VY-SVAMA----RFVETFARVLGDPALP----HLFFVEGGALAVENALK 137 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTC---CCCTTT-CC-CHHHH----HHHHHHHHHHCCTTCC----EEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhc---CCCCcc-cC-CHHHH----HHHHHHHHhcCCCCCC----EEEEeCchHHHHHHHHH
Confidence 478999 8 9988 55441 111111 21 12233 33367888886 3443 477777665 8887776
Q ss_pred hhc---C----------C-CCEEEEecCCCcccccccccccCC------ceeeeeeeeEEEeeeeCC--CC-------CC
Q 010058 161 ALL---K----------P-HERIMALDLPHGGHLSHGYQTDTK------KISAVSIFFETMPYRLDE--ST-------GY 211 (519)
Q Consensus 161 all---~----------p-GD~Vl~~~~~~~~~~~~~~~~~~~------~v~~~g~~~~~v~~~~d~--~~-------~~ 211 (519)
.+. . | ||+|++++..+.+........... ...-....+..++ .+. .. +.
T Consensus 138 ~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~ 215 (449)
T 2cjg_A 138 AAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAP--YMRPGLDEPAMAALEA 215 (449)
T ss_dssp HHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCC--CCCTTCCHHHHHHHHH
T ss_pred HHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEc--CCCchhhccccchhhH
Confidence 542 2 2 999999987665443221111000 0000001122232 221 01 12
Q ss_pred CCHHHHHHHhhh--hCCcEEEEccc-c-cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCe
Q 010058 212 IDYEQLEKSAAL--FRPKLIVAGAS-A-YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YAD 280 (519)
Q Consensus 212 iD~d~l~~~i~~--~k~klIi~~~s-n-~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~d 280 (519)
.|+++|++.+.+ .++++|++++. | +|...+ +++|+++|++||++||+|++|. |+...+.. . ..++ ..|
T Consensus 216 ~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~~d 294 (449)
T 2cjg_A 216 EALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT-GCGLTGTAWAYQQLDVAPD 294 (449)
T ss_dssp HHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSTHHHHTCCCS
T ss_pred HHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc-CCCccCcceeecccCCCce
Confidence 567779988863 36788888854 3 575555 9999999999999999999987 33222210 0 0001 458
Q ss_pred EEEEcCCCcccCCCcceEEeecccccccccCcchhhhHHHHhhh----cccCCCCCCccHHHHHHHHHHHHHhcCHhHHH
Q 010058 281 VVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ----AVFPGLQGGPHNHTISGLAVALKQVKTPEYKA 356 (519)
Q Consensus 281 i~~~S~~K~l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~----~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~ 356 (519)
++++| |++ +.|+++++++ +.+.+.. ....+...+.+....++..++++.+.+ +.
T Consensus 295 i~t~s--K~l---~iG~~~~~~~--------------~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~---~~ 352 (449)
T 2cjg_A 295 IVAFG--KKT---QVCGVMAGRR--------------VDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA---EG 352 (449)
T ss_dssp EEEEC--GGG---SSEEEEECGG--------------GGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH---HT
T ss_pred EEEec--Ccc---cEEEEEECHH--------------HhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh---cc
Confidence 87765 988 5788888873 3332110 011111223345555666677776543 34
Q ss_pred HHHHHHHHHHHHHHHHHhc----C--CEEecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCe
Q 010058 357 YQEQVLSNSSKFARSLLER----G--YDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGG 430 (519)
Q Consensus 357 ~~~~~~~~~~~l~~~L~~~----g--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 430 (519)
+.+++.++++++.+.|+++ . +..+.+ ...++.+++... .+..++.+.|.+.||.++ |+ +.+.
T Consensus 353 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~--~g~~~~~~~~~~-~~~~~~~~~l~~~Gv~v~----~~-----g~~~ 420 (449)
T 2cjg_A 353 LFERAVQHGKYLRARLDELAADFPAVVLDPRG--RGLMCAFSLPTT-ADRDELIRQLWQRAVIVL----PA-----GADT 420 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEE--ETTEEEEECSSH-HHHHHHHHHHHHTTEECE----EE-----TTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEee--ccEEEEEEECCh-HHHHHHHHHHHHCCeEEe----cC-----CCCE
Confidence 5678888889999888764 2 333332 233555665421 134567777778999986 32 2478
Q ss_pred EEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 431 IRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 431 iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
||++++..++ ++|++++++.|.+++..
T Consensus 421 iRi~~~~~~t----~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 421 VRFRPPLTVS----TAEIDAAIAAVRSALPV 447 (449)
T ss_dssp EEECCCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCC----HHHHHHHHHHHHHHHHH
Confidence 9999888788 89999999999998763
No 224
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.78 E-value=1.8e-17 Score=172.26 Aligned_cols=326 Identities=13% Similarity=0.111 Sum_probs=192.1
Q ss_pred cCeeecCCC--C---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~e--n---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+. + ..+|.|.+++.+.+.+.. .+ . | ..+ +....+++++++++ ..+ +|.+++|
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~--~~---~-~-~~~----~~~~l~~~la~~~~-~~~----~v~~~~s 120 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARGW--LY---G-A-PGE----AEVLLAEKILGYVK-RGG----MIRFVNS 120 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CC---S-S-CCH----HHHHHHHHHHHHHC-TTC----EEEEESS
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhCC--CC---C-C-CCH----HHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 346776553 2 258999999999887621 11 1 1 112 23334478888884 332 4666665
Q ss_pred HH-HHHHHHHhh--cCCCCEEEEecCCCcccccccccccCCc------eeeeeee----eEEEeeeeCCCCCCCCHHHHH
Q 010058 152 SP-ANFQVYTAL--LKPHERIMALDLPHGGHLSHGYQTDTKK------ISAVSIF----FETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 152 s~-a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~~~~~~------v~~~g~~----~~~v~~~~d~~~~~iD~d~l~ 218 (519)
++ |+.+++.+. +.++|+|++++..+.+............ ....|.. ...++++. .|+++++
T Consensus 121 gseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le 194 (434)
T 2epj_A 121 GTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY------NDVEALE 194 (434)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET------TCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC------CCHHHHH
Confidence 55 988888762 3456788888766544322110000000 0001110 01111211 3899999
Q ss_pred HHhhh--hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCC-C-CCCC-CCeEEEEcCC
Q 010058 219 KSAAL--FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVI-P-SPFE-YADVVTTTTH 287 (519)
Q Consensus 219 ~~i~~--~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~-~-~p~~-~~di~~~S~~ 287 (519)
+++++ .++++|++++.+ +|...+ +++|+++|++||++||+|++|. |+ ..+.. . ..++ ..|++++|
T Consensus 195 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~s~s-- 270 (434)
T 2epj_A 195 RVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GF-RLGLEGAQGYFNIEGDIIVLG-- 270 (434)
T ss_dssp HHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TT-TSSTTHHHHHHTCCCSEEEEE--
T ss_pred HHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ce-eCCcchhhHHhCCCCCeeeec--
Confidence 99875 267888887543 677777 9999999999999999999987 54 21110 0 0000 35777655
Q ss_pred Cccc-CCCcceEEeecccccccccCcchhhhHHHHhhh-c-ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHH
Q 010058 288 KSLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ-A-VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSN 364 (519)
Q Consensus 288 K~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~-~-~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~ 364 (519)
|+++ |.++|++++++ ++.+.+.. . .+.+...+.+...+++..++++.+.+ +++.+++.++
T Consensus 271 K~l~~G~~~G~v~~~~--------------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~ 333 (434)
T 2epj_A 271 KIIGGGFPVGAVAGSR--------------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREA 333 (434)
T ss_dssp GGGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHH
T ss_pred chhcCCcceeeeeecH--------------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHH
Confidence 9885 45789999987 55554433 1 01111123455555666667765532 3456778888
Q ss_pred HHHHHHHHHhc----CCEEecCCCCcceeeeeccCCC------------CcHHHHHHhhcccCeEEcccccCCCCCCCCC
Q 010058 365 SSKFARSLLER----GYDLVSGGTENHLVLVNLRNKG------------IDGSRVEKVLESVHIAANKNTVPGDVSAMVP 428 (519)
Q Consensus 365 ~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~------------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~ 428 (519)
++++.+.|+++ ++.....+ ...++++.+.... .+..++.+.|.+.||.++ |+. .
T Consensus 334 ~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~-----~ 403 (434)
T 2epj_A 334 AKALEEAASEVLDRTGLPYTINR-VESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIA----PSN-----L 403 (434)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEE-ETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECC----SST-----T
T ss_pred HHHHHHHHHHHHhhCCCcEEEEE-eeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEe----ccC-----C
Confidence 88888888764 55321111 2345666654311 124567777878999996 432 1
Q ss_pred CeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 429 GGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 429 ~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
..+|++ ...+ ++|++++++.|+++++.
T Consensus 404 ~~~~~~--~~~t----~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 404 EAVFTG--LPHQ----GEALEIAVEGLRSSLKT 430 (434)
T ss_dssp SCEECC--TTCS----HHHHHHHHHHHHHHHHH
T ss_pred CcEEEe--ccCC----HHHHHHHHHHHHHHHHH
Confidence 246654 3455 89999999999998864
No 225
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.78 E-value=1.3e-16 Score=165.66 Aligned_cols=323 Identities=11% Similarity=0.059 Sum_probs=189.9
Q ss_pred ccCeeecCCC--C---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 010058 76 WKGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS 150 (519)
Q Consensus 76 ~~~i~L~a~e--n---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s 150 (519)
+..|++.++- + ..+|.|.+|+.+.+.+... ++...+...+++ ++++++++ ..+ .|++++
T Consensus 53 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-------~~~~~~~~~~l~----~~la~~~~-~~~----~v~~~~ 116 (429)
T 3k28_A 53 NEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTS-------FGAPTEIENKLA----KLVIERVP-SIE----IVRMVN 116 (429)
T ss_dssp CEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSC-------CSSCCHHHHHHH----HHHHHHST-TCS----EEEEES
T ss_pred CEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcC-------cCCCCHHHHHHH----HHHHHhCC-CCC----EEEEeC
Confidence 3456766543 2 2589999999998876221 111123333343 77778876 333 466666
Q ss_pred cHH-HHHHHHHhhcC--CCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCC------------CCCHH
Q 010058 151 GSP-ANFQVYTALLK--PHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTG------------YIDYE 215 (519)
Q Consensus 151 Gs~-a~~~~~~all~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~------------~iD~d 215 (519)
|++ |+..++..+.. ++++|++++..+.+...... ...|.....+.++.. ... .-|++
T Consensus 117 ~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~-------~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 188 (429)
T 3k28_A 117 SGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLL-------IKAGSGVATLGLPDS-PGVPEGVAKNTITVAYNDLE 188 (429)
T ss_dssp SHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGC-------SSCCTTC-----CCC-TTCCHHHHTTEEEEETTCHH
T ss_pred ChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHH-------HhcCCcccccCCCCc-CCCCCcccCceeecCCCCHH
Confidence 555 99888877643 67889988765533321111 011110001111000 000 01899
Q ss_pred HHHHHhhh--hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEE
Q 010058 216 QLEKSAAL--FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTT 284 (519)
Q Consensus 216 ~l~~~i~~--~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~ 284 (519)
++++++++ .++++|++.+.+ .|...+ +++|+++|++||++||+|++|. |+ ..+... ..++ ..|++++
T Consensus 189 ~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~t~ 266 (429)
T 3k28_A 189 SVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GF-RVAYNCGQGYYGVTPDLTCL 266 (429)
T ss_dssp HHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TT-TSSTTHHHHHHTCCCSEEEE
T ss_pred HHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchHHHHhCCCCceehh
Confidence 99998874 256778777544 455666 9999999999999999999984 43 221100 0000 3578776
Q ss_pred cCCCccc-CCCcceEEeecccccccccCcchhhhHHHHhhhc--ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHH
Q 010058 285 TTHKSLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA--VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQV 361 (519)
Q Consensus 285 S~~K~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~--~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~ 361 (519)
| |+++ |+|.|++++++ ++.+.+... .+.+...+.+....++..++++... ++..+++
T Consensus 267 s--K~~~~G~~iG~~~~~~--------------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~ 326 (429)
T 3k28_A 267 G--KVIGGGLPVGAYGGKA--------------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEF 326 (429)
T ss_dssp C--GGGGTTSCCEEEEECH--------------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHH
T ss_pred h--hhhcCCCCeEEEEEcH--------------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHH
Confidence 6 8774 57789999987 555544321 1122223445555555566776543 5677888
Q ss_pred HHHHHHHHHHHHhc----CC-EEecCCCCcceeeeeccCCC------------CcHHHHHHhhcccCeEEcccccCCCCC
Q 010058 362 LSNSSKFARSLLER----GY-DLVSGGTENHLVLVNLRNKG------------IDGSRVEKVLESVHIAANKNTVPGDVS 424 (519)
Q Consensus 362 ~~~~~~l~~~L~~~----g~-~~~~~~~~~~~~~v~~~~~~------------~~~~~~~~~L~~~gI~v~~~~~p~~~~ 424 (519)
+++++++.+.|++. ++ ..+.+ ...+..+.+.... ....++.+.|.+.||.++ |+.
T Consensus 327 ~~~~~~l~~~L~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~-- 398 (429)
T 3k28_A 327 ERKAEMLEAGLRKAAEKHGIPHHINR--AGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLP----PSQ-- 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEE--ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECC----SST--
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEe--eccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEe----cCC--
Confidence 88888888888764 22 11211 1234444442211 113557777888999986 332
Q ss_pred CCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 425 AMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 425 ~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
.+.+|+++ .++ ++|++++++.|++++..
T Consensus 399 ---~~~~r~~~--~~t----~e~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 399 ---FEGLFLST--VHS----DADIEATIAAAEIAMSK 426 (429)
T ss_dssp ---TSCBCCCT--TCC----HHHHHHHHHHHHHHHHT
T ss_pred ---CCCEEEEC--CCC----HHHHHHHHHHHHHHHHH
Confidence 34688853 455 89999999999998863
No 226
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.77 E-value=5e-17 Score=168.40 Aligned_cols=322 Identities=16% Similarity=0.096 Sum_probs=189.5
Q ss_pred cCeeecCCC--C---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~e--n---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+. + +.+|.|.+|+.+.+.+.. .+ ++. ..++...+++++++++ +.+ +|++++|
T Consensus 53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~------~~~---~~~~~~l~~~l~~~~~-~~~----~v~~~~~ 116 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGHAHPKVLARVRETLERGL--TF------GAP---SPLEVALAKKVKRAYP-FVD----LVRFVNS 116 (424)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CC------SSC---CHHHHHHHHHHHHHCT-TCC----EEEEESS
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC--CC------CCC---CHHHHHHHHHHHHhCC-CCC----EEEEeCC
Confidence 347776554 2 358999999999886521 11 111 1233444488888885 443 4666665
Q ss_pred HH-HHHHHHHh--hcCCCCEEEEecCCCcccccccccc-cC--Cc---eeeeeee----eEEEeeeeCCCCCCCCHHHHH
Q 010058 152 SP-ANFQVYTA--LLKPHERIMALDLPHGGHLSHGYQT-DT--KK---ISAVSIF----FETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 152 s~-a~~~~~~a--ll~pGD~Vl~~~~~~~~~~~~~~~~-~~--~~---v~~~g~~----~~~v~~~~d~~~~~iD~d~l~ 218 (519)
++ |+..++.. .+.++|.|++++..+.++....... .. .. ....|.. ...+.++ ..|+++++
T Consensus 117 g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le 190 (424)
T 2e7u_A 117 GTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLE------YNDPEGLR 190 (424)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEEC------TTCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCC------CCCHHHHH
Confidence 55 88877775 2334578888876654432211100 00 00 0001110 0111111 13899999
Q ss_pred HHhhh--hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCC
Q 010058 219 KSAAL--FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTH 287 (519)
Q Consensus 219 ~~i~~--~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~ 287 (519)
+.+++ .++++|++++.+ +|...+ +++|+++ ++||++||+|++|. |+ ..+... ..++ ..|++++ +
T Consensus 191 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~s~--s 265 (424)
T 2e7u_A 191 EVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GF-RLAFGGATELLGLKPDLVTL--G 265 (424)
T ss_dssp HHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TT-TSSTTHHHHHHTCCCSEEEE--C
T ss_pred HHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-cc-ccchhHHHHHhCCCcchhhh--h
Confidence 98874 267788887544 577776 9999999 99999999999987 54 222100 0000 3577755 5
Q ss_pred Cccc-CCCcceEEeecccccccccCcchhhhHHHHhhh-c-ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHH
Q 010058 288 KSLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ-A-VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSN 364 (519)
Q Consensus 288 K~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~-~-~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~ 364 (519)
|+++ |.+.|++++++ ++.+.+.. . .+.+...+.+....++..++++.+.+ .+++.+++.++
T Consensus 266 K~l~~G~~~G~~~~~~--------------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~ 329 (424)
T 2e7u_A 266 KILGGGLPAAAYAGRR--------------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDL 329 (424)
T ss_dssp GGGGTTSSCEEEEECH--------------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHH
T ss_pred hhhhCCcceEEEEEcH--------------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHH
Confidence 9885 45789999987 55554443 1 11111123445555565667765432 24567888888
Q ss_pred HHHHHHHHHhc----CCEE-ecCCCCcceeeeeccCCC------------CcHHHHHHhhcccCeEEcccccCCCCCCCC
Q 010058 365 SSKFARSLLER----GYDL-VSGGTENHLVLVNLRNKG------------IDGSRVEKVLESVHIAANKNTVPGDVSAMV 427 (519)
Q Consensus 365 ~~~l~~~L~~~----g~~~-~~~~~~~~~~~v~~~~~~------------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~ 427 (519)
++++.+.|++. ++.. +.+ ...++++.+...+ .+..++.+.|.++||.++ |+.
T Consensus 330 ~~~l~~~L~~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~----- 398 (424)
T 2e7u_A 330 GARLEAGLKEVLKEKGLPHTVNR--VGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWP----PSN----- 398 (424)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEE--ETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECC----SSS-----
T ss_pred HHHHHHHHHHHHHhCCCceEEEe--eceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEe----ccC-----
Confidence 88888888774 5432 222 2346677764311 124457777778999996 432
Q ss_pred CCeEEeccCccccCCCCHHHHHHHHHHHHHH
Q 010058 428 PGGIRMGTPALTSRGFVEEDFEKVAEFFDAA 458 (519)
Q Consensus 428 ~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~ 458 (519)
...+|++ ...+ ++|++++++.|+++
T Consensus 399 ~~~~~~~--~~~t----~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 399 FEAAFLS--VAHR----EEDVEKTLEALRKA 423 (424)
T ss_dssp SSCEECC--TTCC----HHHHHHHHHHHHHH
T ss_pred CCceEee--ccCC----HHHHHHHHHHHHHh
Confidence 1246665 3455 89999999999875
No 227
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.76 E-value=1.4e-16 Score=166.52 Aligned_cols=338 Identities=10% Similarity=0.042 Sum_probs=189.5
Q ss_pred CeeecCC--CC---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPS--EN---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~--en---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.|++.++ .+ ..+|.|.+|+.+.+.... .+.... +..+.....+++++++++.+.. ..|++++|+
T Consensus 63 ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~------~~~~~~~~la~~l~~~~~~~~~---~~v~~~~sG 131 (451)
T 3oks_A 63 LIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFT--HTCFMV------TPYEGYVAVCEQLNRLTPVRGD---KRSALFNSG 131 (451)
T ss_dssp EEESSHHHHTCTTCTTCHHHHHHHHHHHTTCS--CCTTTT------SCCHHHHHHHHHHHHHSSCCSS---EEEEEESSH
T ss_pred EEEcCCCccccccCCCCHHHHHHHHHHHHhcc--cccCCc------cCCHHHHHHHHHHHHhCCcCCC---CEEEEeCcH
Confidence 4565543 22 248999999998876521 111111 1123334445888888875421 246666665
Q ss_pred H-HHHHHHHhhcC--CCCEEEEecCCCccccccccc------ccCCceeeeeeeeEEEeeee---------CCCC-CCCC
Q 010058 153 P-ANFQVYTALLK--PHERIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRL---------DEST-GYID 213 (519)
Q Consensus 153 ~-a~~~~~~all~--pGD~Vl~~~~~~~~~~~~~~~------~~~~~v~~~g~~~~~v~~~~---------d~~~-~~iD 213 (519)
+ |+.+++..+.. .+++|++++..+.++...... .+..........+..++++. +.++ ...+
T Consensus 132 seA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 211 (451)
T 3oks_A 132 SEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELA 211 (451)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHH
Confidence 5 99988876643 458898888665443211100 00001101111233444331 1000 0113
Q ss_pred HHHHHHHhh----hhCCcEEEEcccc-c-ccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCe
Q 010058 214 YEQLEKSAA----LFRPKLIVAGASA-Y-ARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YAD 280 (519)
Q Consensus 214 ~d~l~~~i~----~~k~klIi~~~sn-~-g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~d 280 (519)
++.+++.+. ..++++|++.+.+ . |...+ +++|+++|++||++||+|++|. |+...+... ..++ ..|
T Consensus 212 ~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pd 290 (451)
T 3oks_A 212 AKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-GFARTGAMFACEHEGIDPD 290 (451)
T ss_dssp HHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCS
T ss_pred HHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCccccchhhhhcCCCCC
Confidence 454545444 2356677777544 3 44444 8999999999999999999975 332222100 0001 357
Q ss_pred EEEEcCCCcc-cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHH
Q 010058 281 VVTTTTHKSL-RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQE 359 (519)
Q Consensus 281 i~~~S~~K~l-~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~ 359 (519)
++++| |++ .|+|.|++++++ ++.+.+......+.. +.+....++..++++.+.. +.+.+
T Consensus 291 i~t~s--K~l~~G~~iG~v~~~~--------------~~~~~~~~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~ 350 (451)
T 3oks_A 291 LIVTA--KGIAGGLPLSAVTGRA--------------EIMDSPHVSGLGGTY-GGNPIACAAALATIETIES---EGLVA 350 (451)
T ss_dssp EEEEC--GGGGTTSSCEEEEEEH--------------HHHTCSCTTSBCCSS-SSCHHHHHHHHHHHHHHHH---TTHHH
T ss_pred eeeeh--hhhhCCcceEEEEECH--------------HHHhhhcCCCcCCCC-CCCHHHHHHHHHHHHHHhh---hhHHH
Confidence 88666 877 366779999987 555544432222222 3344445555556765432 24455
Q ss_pred HHHHHHHHHHHHHHhc----C-CEEecCCCCcceeeeeccC------CCCcHHHHHHhhcccCeEEcccccCCCCCCCCC
Q 010058 360 QVLSNSSKFARSLLER----G-YDLVSGGTENHLVLVNLRN------KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVP 428 (519)
Q Consensus 360 ~~~~~~~~l~~~L~~~----g-~~~~~~~~~~~~~~v~~~~------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~ 428 (519)
+++++.+++.+.|.+. + +..+.+ ...+.++.+.. .......+.+.|.+.||.+. |+.. ..
T Consensus 351 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~---~~ 421 (451)
T 3oks_A 351 RAQQIEKIMKDRLGRLQAEDDRIGDVRG--RGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVL----SCGT---YG 421 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEEEEE--ETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECE----EECT---TS
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEEE--eeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEe----cCCC---CC
Confidence 6666666666666553 2 222222 12355555532 11134567778888999986 3321 23
Q ss_pred CeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 429 GGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 429 ~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+.+||+++...+ ++|++++++.|.+++.
T Consensus 422 ~~iRi~~~~~~t----~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 422 NVVRFLPPLSIG----DDLLNEGLDVLEEVLR 449 (451)
T ss_dssp CEEEECCCTTCC----HHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCC----HHHHHHHHHHHHHHHh
Confidence 689999888878 8999999999998875
No 228
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.76 E-value=1.5e-16 Score=166.38 Aligned_cols=322 Identities=12% Similarity=0.061 Sum_probs=188.3
Q ss_pred cCeeecCCC--C---CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSE--N---FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~e--n---~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+. + +.+|.|.+++.+.+.+.. .+ + +..+++...++++++.++ +.+ +|.+++|
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~------~---~~~~~~~~la~~l~~~~~-~~~----~v~~~~g 121 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QY------A---ASHPLEVRWAERIVAAFP-SIR----KLRFTGS 121 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SS------C---SSCHHHHHHHHHHHHHCT-TCS----EEEEESC
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CC------C---CCCHHHHHHHHHHHhhCC-CCC----EEEEeCC
Confidence 357776553 2 358999999998876521 11 1 123566666788888886 443 4767666
Q ss_pred HH-HHHHHHHh---hcCCCCEEEEecCCCcccccccccccCCc---eeeeeeee----EEEeeeeCCCCCCCCHHHHHHH
Q 010058 152 SP-ANFQVYTA---LLKPHERIMALDLPHGGHLSHGYQTDTKK---ISAVSIFF----ETMPYRLDESTGYIDYEQLEKS 220 (519)
Q Consensus 152 s~-a~~~~~~a---ll~pGD~Vl~~~~~~~~~~~~~~~~~~~~---v~~~g~~~----~~v~~~~d~~~~~iD~d~l~~~ 220 (519)
++ |+..++.+ +.+ +|+|++++..+.+............ ....|... ..+.++ ..|+++++++
T Consensus 122 g~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~d~~~le~~ 194 (453)
T 2cy8_A 122 GTETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR------PDDIEGMREV 194 (453)
T ss_dssp HHHHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEEC------TTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecC------CCCHHHHHHH
Confidence 65 88888887 555 4678887765543322110000000 00012110 011111 1389999999
Q ss_pred hhh--hCCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCCCc
Q 010058 221 AAL--FRPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTHKS 289 (519)
Q Consensus 221 i~~--~k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~K~ 289 (519)
+++ .++++|++++.+ +|...+ +++|+++|++||++||+|++|. |+ ..+... ..++ ..|++++| |+
T Consensus 195 l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~s~s--K~ 270 (453)
T 2cy8_A 195 FANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLDVQPDLTCLA--KA 270 (453)
T ss_dssp HHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHTCCCSEEEEE--GG
T ss_pred HHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhCCCCcEEEEC--hh
Confidence 874 267888887543 576666 9999999999999999999986 55 222100 0001 35777555 98
Q ss_pred cc-CCCcceEEeecccccccccCcchhhhHHHHhhh---c-ccCCCCCCccHHHHHHHHHHHHH-hcCHhHHHHHHHHHH
Q 010058 290 LR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQ---A-VFPGLQGGPHNHTISGLAVALKQ-VKTPEYKAYQEQVLS 363 (519)
Q Consensus 290 l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~---~-~~~~~~g~~~~~~iaal~~al~~-~~~~~~~~~~~~~~~ 363 (519)
++ |+++|++++++ ++.+.+.. . ...+...+.+....++..++++. + . +.+.+++.+
T Consensus 271 l~~G~~~G~v~~~~--------------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~ 332 (453)
T 2cy8_A 271 SAGGLPGGILGGRE--------------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKIND 332 (453)
T ss_dssp GGTTSSCEEEEECH--------------HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHH
T ss_pred hhCCcceEEEechH--------------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHH
Confidence 86 56889999987 44444332 1 01111123445555666667765 4 2 335677788
Q ss_pred HHHHHHHHHHhc----CCEE-ecCCCCcceeeeeccC-----C-------------CCcHHHHHHhhcccCeEEcccccC
Q 010058 364 NSSKFARSLLER----GYDL-VSGGTENHLVLVNLRN-----K-------------GIDGSRVEKVLESVHIAANKNTVP 420 (519)
Q Consensus 364 ~~~~l~~~L~~~----g~~~-~~~~~~~~~~~v~~~~-----~-------------~~~~~~~~~~L~~~gI~v~~~~~p 420 (519)
+++++.+.|+++ ++.. +.+ ...++++.+.. . ..+..++.+.|.+.||.+. |
T Consensus 333 ~~~~l~~~L~~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~----~ 406 (453)
T 2cy8_A 333 LGQFAREAMNHLFARKGLNWLAYG--RFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIG----G 406 (453)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEC--CTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECB----T
T ss_pred HHHHHHHHHHHHHhhCCCcEEEEE--eeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEe----C
Confidence 888888888764 4422 222 23466666642 1 0124567777778899984 3
Q ss_pred CCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 421 GDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 421 ~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
+ +.+|++ ...+ ++|++++++.|++++...
T Consensus 407 ~-------~~~~l~--~~~t----~~~i~~~l~~l~~~l~~~ 435 (453)
T 2cy8_A 407 R-------GSVFLS--AQHE----REHVEHLVTTFDRVLDRL 435 (453)
T ss_dssp T-------TEEECC--TTCC----HHHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEee--ccCC----HHHHHHHHHHHHHHHHHH
Confidence 2 236764 4455 899999999999998754
No 229
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.76 E-value=8.7e-17 Score=168.14 Aligned_cols=339 Identities=11% Similarity=0.040 Sum_probs=191.7
Q ss_pred CeeecCC--CCC---CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcH
Q 010058 78 GLELIPS--ENF---TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGS 152 (519)
Q Consensus 78 ~i~L~a~--en~---~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs 152 (519)
.|++.++ .++ .+|.|.+|+.+.+.... .+.... +..+.....+++++++++.+.. ..|++++|+
T Consensus 66 ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~--~~~~~~------~~~~~~~~la~~l~~~~~~~~~---~~v~~~~sG 134 (453)
T 4ffc_A 66 FIDLGAGIAVTTVGASHPAVAAAIADQATHFT--HTCFMV------TPYEQYVQVAELLNALTPGDHD---KRTALFNSG 134 (453)
T ss_dssp EEESSHHHHTCTTCTTCHHHHHHHHHHHHHCS--CCTTTT------SCCHHHHHHHHHHHHHSSCSSC---EEEEEESSH
T ss_pred EEEcCCCcccCcCCCCCHHHHHHHHHHHHhcc--ccccCc------CCCHHHHHHHHHHHHhCCCCCC---cEEEEeCcH
Confidence 4666544 222 48999999999886521 121111 1123334445888899875421 246666665
Q ss_pred H-HHHHHHHhhc--CCCCEEEEecCCCccccccccc------ccCCceeeeeeeeEEEeeeeCC-CCCCCC--------H
Q 010058 153 P-ANFQVYTALL--KPHERIMALDLPHGGHLSHGYQ------TDTKKISAVSIFFETMPYRLDE-STGYID--------Y 214 (519)
Q Consensus 153 ~-a~~~~~~all--~pGD~Vl~~~~~~~~~~~~~~~------~~~~~v~~~g~~~~~v~~~~d~-~~~~iD--------~ 214 (519)
+ |+..++..+. ..+++|++++..+.++...... .+..........+..++++... +.+..+ .
T Consensus 135 seA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 214 (453)
T 4ffc_A 135 AEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAI 214 (453)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHH
Confidence 5 9998886654 3568899888766443211000 0000110011123334433210 111122 4
Q ss_pred HHHHHHhhhhCCcEEEEcccc-c-ccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCC---C-CCeEEEE
Q 010058 215 EQLEKSAALFRPKLIVAGASA-Y-ARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPF---E-YADVVTT 284 (519)
Q Consensus 215 d~l~~~i~~~k~klIi~~~sn-~-g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~---~-~~di~~~ 284 (519)
+.+++.+...++.+|++.+.+ . |...+ +++|+++|++||++||+|++|. |+...+.. ..+ + ..|++++
T Consensus 215 ~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~-~a~~~~~~~pdi~t~ 292 (453)
T 4ffc_A 215 SRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQT-GFARTGAW-FASEHEGIVPDIVTM 292 (453)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEEEE
T ss_pred HHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCccccc-chhhhcCCCcchHhh
Confidence 566666654355666666555 3 34444 8999999999999999999975 33221110 000 0 3578877
Q ss_pred cCCCcc-cCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Q 010058 285 TTHKSL-RGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLS 363 (519)
Q Consensus 285 S~~K~l-~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~ 363 (519)
| |++ .|+|.|++++++ ++.+.+......+.. +.+....++..++++.+.. +.+.+++++
T Consensus 293 s--K~~~~G~~~G~~~~~~--------------~i~~~~~~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~ 352 (453)
T 4ffc_A 293 A--KGIAGGMPLSAVTGRA--------------ELMDAVYAGGLGGTY-GGNPVTCAAAVAALGVMRE---LDLPARARA 352 (453)
T ss_dssp C--GGGGTTSSCEEEEEEH--------------HHHTTSCTTSSCCSS-SSCHHHHHHHHHHHHHHHH---TTHHHHHHH
T ss_pred h--hhhcCCcCeEEEEECH--------------HHHhhhcccCcCCCC-CcCHHHHHHHHHHHHHhhh---hhHHHHHHH
Confidence 6 776 367779999987 555544432222222 3344445555556665432 234555666
Q ss_pred HHHHHHHHHHhc----C-CEEecCCCCcceeeeeccC------CCCcHHHHHHhhcccCeEEcccccCCCCCCCCCCeEE
Q 010058 364 NSSKFARSLLER----G-YDLVSGGTENHLVLVNLRN------KGIDGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIR 432 (519)
Q Consensus 364 ~~~~l~~~L~~~----g-~~~~~~~~~~~~~~v~~~~------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 432 (519)
+.+++.+.|.+. + +..+.+ ...+.++.+.. ......++.+.|.+.||.+. |+.. ..+.+|
T Consensus 353 ~~~~l~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~----~~~~---~~~~iR 423 (453)
T 4ffc_A 353 IEASVTSRLSALAEEVDIIGEVRG--RGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLIL----TCGT---FGNVIR 423 (453)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEE--ETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECC----EECT---TSCEEE
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEe--eceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEe----cCCC---CCCEEE
Confidence 666666666543 2 222222 12355555532 11124567777888999986 3321 236899
Q ss_pred eccCccccCCCCHHHHHHHHHHHHHHHHHH
Q 010058 433 MGTPALTSRGFVEEDFEKVAEFFDAAVKLA 462 (519)
Q Consensus 433 i~~~~~ttrg~~~~di~~l~~~l~~~l~~~ 462 (519)
++++...+ ++|++++++.|.+++...
T Consensus 424 i~~~~~~t----~e~i~~~l~~l~~~l~~~ 449 (453)
T 4ffc_A 424 LLPPLVIG----DDLLDEGITALSDIIRAK 449 (453)
T ss_dssp ECCCTTCC----HHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 99888878 899999999999998753
No 230
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.75 E-value=4.1e-16 Score=161.75 Aligned_cols=325 Identities=13% Similarity=0.105 Sum_probs=184.0
Q ss_pred cCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++.++-. ..+|.|.+|+.+.+.+....+ |. .+... ..+++++++++ ..+ .|++++|
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~------~~-~~~~~----~la~~l~~~~~-~~~----~v~~~~s 117 (429)
T 4e77_A 54 AYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFG------AP-TEMEV----KMAQLVTDLVP-TMD----MVRMVNS 117 (429)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCS------SC-CHHHH----HHHHHHHHHST-TCS----EEEEESS
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcccC------CC-CHHHH----HHHHHHHhhCC-CCC----EEEEeCc
Confidence 4567665532 248999999999886622111 11 12233 33478888886 343 4666665
Q ss_pred HH-HHHHHHHhh--cCCCCEEEEecCCCcccccc-cccccCCcee-----eeeee----eEEEeeeeCCCCCCCCHHHHH
Q 010058 152 SP-ANFQVYTAL--LKPHERIMALDLPHGGHLSH-GYQTDTKKIS-----AVSIF----FETMPYRLDESTGYIDYEQLE 218 (519)
Q Consensus 152 s~-a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~-~~~~~~~~v~-----~~g~~----~~~v~~~~d~~~~~iD~d~l~ 218 (519)
++ |+..++... ..+++.|++.+..+.+.... .......... ..+.. .....++ ..|+++++
T Consensus 118 Gsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le 191 (429)
T 4e77_A 118 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCT------YNDLASVR 191 (429)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEEC------TTCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecC------CCCHHHHH
Confidence 55 888777754 24677888877554333210 0000000000 00000 0000000 12899999
Q ss_pred HHhhhh--CCcEEEEcccc--cccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCC--CCCC-CCeEEEEcCC
Q 010058 219 KSAALF--RPKLIVAGASA--YARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIP--SPFE-YADVVTTTTH 287 (519)
Q Consensus 219 ~~i~~~--k~klIi~~~sn--~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~--~p~~-~~di~~~S~~ 287 (519)
++++++ ++++|++.+.+ .|...+ +++|+++|++||++||+|++|. |+ ..+... ..++ ..|++++|
T Consensus 192 ~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~~~pdi~t~s-- 267 (429)
T 4e77_A 192 QAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYHVIPDLTCLG-- 267 (429)
T ss_dssp HHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTTCCCSEEEEE--
T ss_pred HHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcCCCCCeeeec--
Confidence 998752 56777777554 355556 8999999999999999999987 33 211100 0001 35787666
Q ss_pred Cccc-CCCcceEEeecccccccccCcchhhhHHHHhhhcc--cCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHH
Q 010058 288 KSLR-GPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAV--FPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSN 364 (519)
Q Consensus 288 K~l~-GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~--~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~ 364 (519)
|+++ |++.|++++++ ++.+.+.... +.+...+.+...+++..++++.+..+ ++.++++++
T Consensus 268 K~~~~G~~~G~~~~~~--------------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~ 330 (429)
T 4e77_A 268 KIIGGGMPVGAFGGRR--------------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQV---GVYETLTEL 330 (429)
T ss_dssp GGGGTTSCCEEEEECH--------------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTST---THHHHHHHH
T ss_pred ccccCCCCeEEEEECH--------------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 7774 66789999987 5555443210 11111245666666667778766443 345566666
Q ss_pred HHHHHHHHHhc----CCEEecCCCCcceeeeeccCCC-------------CcHHHHHHhhcccCeEEcccccCCCCCCCC
Q 010058 365 SSKFARSLLER----GYDLVSGGTENHLVLVNLRNKG-------------IDGSRVEKVLESVHIAANKNTVPGDVSAMV 427 (519)
Q Consensus 365 ~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~~~-------------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~ 427 (519)
.+++.+.|.+. ++.....+ ...++++.+.... ....++.+.|.+.||.++ |+.
T Consensus 331 ~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~----~~~----- 400 (429)
T 4e77_A 331 TDSLATGLRHAAKEENIPLVVNH-VGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLA----PSA----- 400 (429)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEE-ETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECC----SST-----
T ss_pred HHHHHHHHHHHHHhCCCceEEEE-eeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEe----ecC-----
Confidence 66666666553 43322211 2345555554320 012567777878899986 332
Q ss_pred CCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 428 PGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 428 ~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
...+|++ ..++ ++|++++++.|++++.
T Consensus 401 ~~~~~~~--~~~t----~e~i~~~l~~l~~~l~ 427 (429)
T 4e77_A 401 FEAGFMS--LAHS----NEDIQKTVNAARRCFA 427 (429)
T ss_dssp TSCEECC--TTCC----HHHHHHHHHHHHHHHT
T ss_pred CCCEEEe--ccCC----HHHHHHHHHHHHHHHH
Confidence 2346664 4455 8999999999998874
No 231
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.68 E-value=4.5e-16 Score=163.52 Aligned_cols=322 Identities=13% Similarity=0.105 Sum_probs=184.4
Q ss_pred CcHHHHHHHhhHhhhc-cCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEe-CCcHHHHHHHHHhhc--
Q 010058 88 TSVSVMQAVGSVMTNK-YSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQS-LSGSPANFQVYTALL-- 163 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~-~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~-~sGs~a~~~~~~all-- 163 (519)
.+|.|.+|+.+.+... + ++.. .|+. ....++++.+.++++++++...+ .|.+ .||+.||.+++..+.
T Consensus 80 ~~p~v~~A~~~~~~~~~~--~~~~--~~~~-~~~~~l~~~la~~l~~~~~~~~~----~v~f~~sGseA~~~Aik~a~~~ 150 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTF--INRP--ALGI-LPPENFVEKLRESLLSVAPKGMS----QLITMACGSCSNENAFKTIFMW 150 (472)
T ss_dssp TCHHHHHHHHCGGGHHHH--HCCC--CTTT-SCBTTHHHHHHHTGGGGCCTTCC----EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhccc--cccc--cccc-ccHHHHHHHHHHHHHHhCCCCcC----EEEEeCCchhHHHHHHHHHHHH
Confidence 4899999998876421 1 1111 1121 11234555555666666654443 3555 555559998887663
Q ss_pred -----------------------CCC---CEEEEecCCCccccccccc-ccCCceeeeee---eeEEEeeeeC--C--CC
Q 010058 164 -----------------------KPH---ERIMALDLPHGGHLSHGYQ-TDTKKISAVSI---FFETMPYRLD--E--ST 209 (519)
Q Consensus 164 -----------------------~pG---D~Vl~~~~~~~~~~~~~~~-~~~~~v~~~g~---~~~~v~~~~d--~--~~ 209 (519)
+|| ++|++++..+.++...... .......-.|. .+..++++.. + ..
T Consensus 151 ~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 230 (472)
T 1ohv_A 151 YRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEF 230 (472)
T ss_dssp HHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGC
T ss_pred hhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccc
Confidence 156 8999988655443221110 00000000000 0011222110 0 00
Q ss_pred -------CCCCHHHHHHHhhhh-----CCcEEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCC
Q 010058 210 -------GYIDYEQLEKSAALF-----RPKLIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGV 271 (519)
Q Consensus 210 -------~~iD~d~l~~~i~~~-----k~klIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~ 271 (519)
...|+++|+++++++ ++++|++.+ +++|...+ +++|+++|++||++||+|++|. |+...+.
T Consensus 231 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~ 309 (472)
T 1ohv_A 231 VKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQT-GGGSTGK 309 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSS
T ss_pred cccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCccc-CCCCCCC
Confidence 023688999988763 688898873 33776666 9999999999999999999986 3222211
Q ss_pred ----CCCCCC-CCeEEEEcCCCc-ccCCCcceEEeecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHH
Q 010058 272 ----IPSPFE-YADVVTTTTHKS-LRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVA 345 (519)
Q Consensus 272 ----~~~p~~-~~di~~~S~~K~-l~GprgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~a 345 (519)
....+. ..|++++| |+ ++ ||+++ ++ ++. .+......+. .+.+...+++..++
T Consensus 310 ~~~~~~~gv~~~~Di~t~s--K~~l~---GG~~~-~~--------------~~~-~~~~~~~~~T-~~~~~~~~aaa~aa 367 (472)
T 1ohv_A 310 FWAHEHWGLDDPADVMTFS--KKMMT---GGFFH-KE--------------EFR-PNAPYRIFNT-WLGDPSKNLLLAEV 367 (472)
T ss_dssp SSGGGGGCCSSCCSEEEEC--GGGSS---EEEEE-CG--------------GGS-CSSSSSSCCS-SSSCHHHHHHHHHH
T ss_pred chhccccCCCCCCCEEEEc--ccccc---CCccC-ch--------------hhc-ccccccccCc-cCccHHHHHHHHHH
Confidence 001110 16888776 98 44 47776 44 321 1111111111 22345555565677
Q ss_pred HHHhcCHhHHHHHHHHHHHHHHHHHHHHhc--CCE----EecCCCCcceeeeeccCCCCcHHHHHHhhcccCeEEccccc
Q 010058 346 LKQVKTPEYKAYQEQVLSNSSKFARSLLER--GYD----LVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTV 419 (519)
Q Consensus 346 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~ 419 (519)
++.+.+ +.+.+++.+++++|.+.|+++ +++ .+.+ ...++.+++.. ..+...+.+.|.+.||.+.
T Consensus 368 l~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~--~g~~~~~~~~~-~~~~~~~~~~l~~~Gv~~~---- 437 (472)
T 1ohv_A 368 INIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRG--RGTFCSFDTPD-ESIRNKLISIARNKGVMLG---- 437 (472)
T ss_dssp HHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEE--ETTEEEEECSS-HHHHHHHHHHHHHTTEECE----
T ss_pred HHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecC--CceEEEEEeCC-hhHHHHHHHHHHHCCeEEe----
Confidence 776543 235678888888888888775 222 1222 23344555432 1124567777778899986
Q ss_pred CCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 420 PGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 420 p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
|+ +.+.||++++..++ ++|++++++.|.+++.
T Consensus 438 ~~-----g~~~iRi~~~~~~t----~e~i~~~~~~l~~~l~ 469 (472)
T 1ohv_A 438 GC-----GDKSIRFRPTLVFR----DHHAHLFLNIFSDILA 469 (472)
T ss_dssp EE-----TTTEEEECCCTTCC----HHHHHHHHHHHHHHHH
T ss_pred cC-----CCCEEEEECCCCCC----HHHHHHHHHHHHHHHH
Confidence 32 24689999998888 9999999999999876
No 232
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.36 E-value=1.4e-16 Score=166.08 Aligned_cols=323 Identities=13% Similarity=0.044 Sum_probs=181.5
Q ss_pred cCeeecCCCCC-----CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCc
Q 010058 77 KGLELIPSENF-----TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSG 151 (519)
Q Consensus 77 ~~i~L~a~en~-----~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sG 151 (519)
..|++..+... .+|.|.+|+.+.+......+|+ ...+....++++++++ ..+. -+++.||
T Consensus 101 ~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~-----------~~~~~~Lae~L~~~~p-~~~~---v~~~nSG 165 (465)
T 2yky_A 101 AYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQ-----------TENEALFAEAVCDRFP-SIDL---VRFTNSG 165 (465)
Confidence 45777665542 3789999998877652211111 1222333377778884 2222 2555667
Q ss_pred HHHHHHHHHhh--cCCCCEEEEecCCCcccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhh--hCCc
Q 010058 152 SPANFQVYTAL--LKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAAL--FRPK 227 (519)
Q Consensus 152 s~a~~~~~~al--l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~--~k~k 227 (519)
+.|+.+++..+ ...+|+|+.++..+.++..... . +....|.....+.++ .-|++++++++++ .+++
T Consensus 166 seA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~-s---g~~~~g~~~~~~~~~------~~d~~~l~~~l~~~~~~~a 235 (465)
T 2yky_A 166 TEANLMALATATAITGRKTVLAFDGGYHGGLLNFA-S---GHAPTNAPYHVVLGV------YNDVEGTADLLKRHGHDCA 235 (465)
Confidence 77999887764 3456999988755533321100 0 000112111112222 1378899988873 3788
Q ss_pred EEEEcc--cccccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCCCCCC-CCeEEEEcCCCccc-CCCcceEE
Q 010058 228 LIVAGA--SAYARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFE-YADVVTTTTHKSLR-GPRGAMIF 299 (519)
Q Consensus 228 lIi~~~--sn~g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~p~~-~~di~~~S~~K~l~-GprgG~i~ 299 (519)
+|++.+ +|+|...+ +++|+++|++||++||+|++|. +-.........++ ..|+++ ++|+++ |.+.|+++
T Consensus 236 avi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t--~sK~lg~G~piG~v~ 312 (465)
T 2yky_A 236 AILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTT--LGKYIGGGMSFGAFG 312 (465)
Confidence 988874 34675555 8999999999999999999988 4211000000001 357665 559885 45679999
Q ss_pred eecccccccccCcchhhhHHHHhhh---c-ccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQ---A-VFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER 375 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~---~-~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 375 (519)
+++ ++.+.+.. . .+.+...+.+....++..++++.+.+ +.+.+++.++.++|.+.|++.
T Consensus 313 ~~~--------------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 2yky_A 313 GRR--------------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRI 375 (465)
Confidence 988 44444332 1 11111112233344444456666544 245677778888888887765
Q ss_pred --CCEEecC-CCCcceeeeeccCCCC------------cHHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCcccc
Q 010058 376 --GYDLVSG-GTENHLVLVNLRNKGI------------DGSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTS 440 (519)
Q Consensus 376 --g~~~~~~-~~~~~~~~v~~~~~~~------------~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~tt 440 (519)
.+.++.. .....++++.+....+ ....+.+.|.+.||.+. |+.. . . ++...+
T Consensus 376 ~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~----p~~~-----~-~---~s~~~t 442 (465)
T 2yky_A 376 AVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLA----PRGM-----Y-A---LSLEIA 442 (465)
Confidence 2222111 1123344554432010 13346667778999986 3321 0 1 233445
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 010058 441 RGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 441 rg~~~~di~~l~~~l~~~l~~ 461 (519)
++|+++++++|.++++.
T Consensus 443 ----~edid~~l~~l~~~l~~ 459 (465)
T 2yky_A 443 ----DAGRDAFAEALADFIGE 459 (465)
Confidence 89999999999988864
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.52 E-value=4.6e-12 Score=131.08 Aligned_cols=303 Identities=17% Similarity=0.172 Sum_probs=171.5
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhc--CC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALL--KP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all--~p 165 (519)
-.|.|.+|+.+.+.....-+ ..+....++ .+++++.+..- +. -.++.||+.||..++.... ..
T Consensus 104 ~hp~v~~Av~~q~~~~~~~~-------~~~~~~~~l----ae~l~~~~p~~-~~---v~f~~SGsEA~e~AiklAr~~tg 168 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGINLT-------GHNLLEGRL----ARLICERFPQI-EQ---LRFTNSGTEANLMALTAALHFTG 168 (454)
T ss_dssp CCHHHHHHHHHHHHTCSCCC-------SEESSHHHH----HHHHHHHSTTC-SE---EEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhcCCCcc-------CCcHHHHHH----HHHHHHhCCCC-CE---EEEeCchHHHHHHHHHHHHhccc
Confidence 37899999998886532111 112222333 36777777432 11 2445678889998777652 34
Q ss_pred CCEEEEecCCC-cccccccccccCCceeeeeeeeEEEeeeeCCCCCCCCHHHHHHHhhhh--CCcEEEEcc--ccccccc
Q 010058 166 HERIMALDLPH-GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALF--RPKLIVAGA--SAYARLY 240 (519)
Q Consensus 166 GD~Vl~~~~~~-~~~~~~~~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l~~~i~~~--k~klIi~~~--sn~g~~~ 240 (519)
.++|+.++-.+ |.....+....... ..+....++ .-|.+.+++.+.++ +..+|++.| .+.|...
T Consensus 169 r~~ii~~~~~yHG~t~~~~~~~~~~~-----~~~~~~~~p------~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~ 237 (454)
T 4ao9_A 169 RRKIVVFSGGYHGGVLGFGARPSPTT-----VPFDFLVLP------YNDAQTARAQIERHGPEIAVVLVEPMQGASGCIP 237 (454)
T ss_dssp CCEEEEETTCBCSTTCBBSSSBCTTS-----CCSEEEEEC------TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEE
T ss_pred CCeEEEEeCCcCCccccccccccCcc-----CCCCcccCC------CchHHHHHHHHhhcCCceEEEEeccccCCCCccC
Confidence 56788776543 33222211111111 111122222 23788999888764 345677763 3355444
Q ss_pred c----HHHHHHHHhhcCCEEEehhhhhhhcccc-------CCCCCCCCCCeEEEEcCCCcccC-CCcceEEeeccccccc
Q 010058 241 D----YARIRKVCDKQKAVMLADMAHISGLVAA-------GVIPSPFEYADVVTTTTHKSLRG-PRGAMIFFRKGVKEIN 308 (519)
Q Consensus 241 d----~~~i~~ia~~~~~~livD~ah~~g~~~~-------~~~~~p~~~~di~~~S~~K~l~G-prgG~i~~~~~~~~~~ 308 (519)
+ +++|+++|++||++||+|+++. |-... ++ ..|+++++ |.++| ...|.+.+++
T Consensus 238 p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv------~PDi~t~g--K~lggG~Piga~~~~~------ 302 (454)
T 4ao9_A 238 GQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGI------RSDLTTLG--KYIGGGMSFGAFGGRA------ 302 (454)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTC------CCSEEEEE--GGGGTTSSCEEEEECH------
T ss_pred CchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCC------CCcEEEec--cccCCCCcceeeeeHH------
Confidence 4 8999999999999999999986 42211 22 34899887 87754 3458888887
Q ss_pred ccCcchhhhHHHHhhhcccCCCC-C--CccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----CCE--E
Q 010058 309 KQGQEVMYAYEDKINQAVFPGLQ-G--GPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER----GYD--L 379 (519)
Q Consensus 309 ~~g~~~~~~~~~~i~~~~~~~~~-g--~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~--~ 379 (519)
++.+.+....-+..+ + +.+....++..++|+.+.+++ ..+++.++.++|.+.|+++ ++. +
T Consensus 303 --------ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~~~~~v 371 (454)
T 4ao9_A 303 --------DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPE---AAGALAERGEALRARLNALCANEGVAMQF 371 (454)
T ss_dssp --------HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHH---HHHHHHHHHHHHHHHHHHHHHHHTBSCEE
T ss_pred --------HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccC---hhHHHHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 555554332111111 1 223445555556788777644 4566677777777777654 321 1
Q ss_pred ecCCCCcceeeeeccCC---------CCcH---HHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHH
Q 010058 380 VSGGTENHLVLVNLRNK---------GIDG---SRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEED 447 (519)
Q Consensus 380 ~~~~~~~~~~~v~~~~~---------~~~~---~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~d 447 (519)
-.-| .+.-+.+... ..+. ..+...|.+.||.+. |. +.+.++++ .| ++|
T Consensus 372 rg~G---~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~----p~-------~~~~~s~~--~T----~~d 431 (454)
T 4ao9_A 372 TGIG---SLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSS----PR-------GFVVLSLP--LT----DAD 431 (454)
T ss_dssp EEET---TEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECC----TT-------CEEECCTT--CC----HHH
T ss_pred eeec---eEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEc----CC-------CCEEEeCC--CC----HHH
Confidence 1111 1222222211 1121 224455667899985 21 23444433 45 899
Q ss_pred HHHHHHHHHHHHHHH
Q 010058 448 FEKVAEFFDAAVKLA 462 (519)
Q Consensus 448 i~~l~~~l~~~l~~~ 462 (519)
+++++++|++++...
T Consensus 432 Id~~l~al~~~l~~~ 446 (454)
T 4ao9_A 432 IDRYVAAIGSFIGGH 446 (454)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999754
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.46 E-value=5.5e-11 Score=123.47 Aligned_cols=331 Identities=16% Similarity=0.098 Sum_probs=173.7
Q ss_pred CcHHHHHHHhhHhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhh--cCC
Q 010058 88 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTAL--LKP 165 (519)
Q Consensus 88 ~~~~V~ea~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~al--l~p 165 (519)
-.|.|.+|+.+.+.. + .+. ..++...+...+ ..+++.+++..+... ..+.++||+.|+..++... ...
T Consensus 81 ~~p~v~~Ai~~q~~~-~--~~~-~~~~~~~~~~~~----lae~L~~~~p~~~~~--~v~f~~sGsEA~e~AlklAr~~t~ 150 (456)
T 4atq_A 81 SDPAVVAAVQEAAAH-F--THT-CFMVTPYEGYVA----VTEQLNRLTPGDHAK--RTVLFNSGAEAVENAVKVARLATG 150 (456)
T ss_dssp TCHHHHHHHHHHHHH-C--SCC-TTTTSCCHHHHH----HHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhh-c--cCc-ccCccCcHHHHH----HHHHHHHhCCCCCCc--EEEEeCChHHHHHHHHHHHhhhhc
Confidence 478999999887765 2 111 111111222222 236777777644221 1245578888998877643 334
Q ss_pred CCEEEEecCCCcccc-cccccc-----cCCceeeeeeeeEEEeeee--CCCC-CCCCHHHHHHHh-------hhhCCcEE
Q 010058 166 HERIMALDLPHGGHL-SHGYQT-----DTKKISAVSIFFETMPYRL--DEST-GYIDYEQLEKSA-------ALFRPKLI 229 (519)
Q Consensus 166 GD~Vl~~~~~~~~~~-~~~~~~-----~~~~v~~~g~~~~~v~~~~--d~~~-~~iD~d~l~~~i-------~~~k~klI 229 (519)
..+|+.....|-|.. ...... +.....-....+..+|++. .... ..-+.+.+++.+ ...++.+|
T Consensus 151 r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAv 230 (456)
T 4atq_A 151 RDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAI 230 (456)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEE
Confidence 577887765443321 100000 0000000011123333321 1111 122333333332 22356777
Q ss_pred EEcccc--cccc----ccHHHHHHHHhhcCCEEEehhhhhhhccccCCC--CCCCC-CCeEEEEcCCCcccC-CCcceEE
Q 010058 230 VAGASA--YARL----YDYARIRKVCDKQKAVMLADMAHISGLVAAGVI--PSPFE-YADVVTTTTHKSLRG-PRGAMIF 299 (519)
Q Consensus 230 i~~~sn--~g~~----~d~~~i~~ia~~~~~~livD~ah~~g~~~~~~~--~~p~~-~~di~~~S~~K~l~G-prgG~i~ 299 (519)
++.|-. -|.. .-+++++++|++||+++|+|+.+.. +-..|.. ..-++ ..|+++++ |.++| ...|.++
T Consensus 231 ivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG-~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P~~av~ 307 (456)
T 4atq_A 231 IIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSG-FCRTGEWFAVDHEGVVPDIITMA--KGIAGGLPLSAIT 307 (456)
T ss_dssp EECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTT-TTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCEEEE
T ss_pred EeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccc-cCCccccccccccCCCCchhhhh--hcccCcCCceeeE
Confidence 776422 3322 3389999999999999999999753 2111110 00000 35999998 77743 3447888
Q ss_pred eecccccccccCcchhhhHHHHhhhcccCCCCCCccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----
Q 010058 300 FRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER---- 375 (519)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~g~~~~~~iaal~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 375 (519)
+++ ++.+.+......+..++ +....++..+.|+.+.+++ +.+++.+..++|.+.|+++
T Consensus 308 ~~~--------------~i~~~~~~~~~~~Tf~g-npla~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~ 369 (456)
T 4atq_A 308 GRA--------------DLLDAVHPGGLGGTYGG-NPVACAAALAAIDTMEQHD---LNGRARHIEELALGKLRELAAEL 369 (456)
T ss_dssp EEH--------------HHHTTSCTTSSCCSSSS-CHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ecH--------------HHHhcccccCCCCCCCC-ChHHHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhc
Confidence 887 55554433322333333 3444444455676665433 4556666666666666554
Q ss_pred C---CEEecC--CCCcceeeeeccCCC---Cc---HHHHHHhhcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCC
Q 010058 376 G---YDLVSG--GTENHLVLVNLRNKG---ID---GSRVEKVLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFV 444 (519)
Q Consensus 376 g---~~~~~~--~~~~~~~~v~~~~~~---~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~ 444 (519)
. ..++.. +. ..+.-+++.... .+ ...+.+.|.+.|+.+..+ | ...+.|||.++...|
T Consensus 370 ~~~~~~~v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~---g----~~~~~irl~PpL~it---- 437 (456)
T 4atq_A 370 SAGGGSVVGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTC---G----TYGNVIRLLPPLVIS---- 437 (456)
T ss_dssp C-----CEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEE---C----TTSCEEEECCCTTCC----
T ss_pred ccccCCceEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEec---C----CCCCEEEEECCCCCC----
Confidence 1 122221 11 123334442211 11 234667777899988632 1 123579999888777
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010058 445 EEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~~ 461 (519)
++|++++++.|.++++.
T Consensus 438 ~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 438 DELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 89999999999999863
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.33 E-value=1.2e-10 Score=121.38 Aligned_cols=330 Identities=14% Similarity=0.142 Sum_probs=175.8
Q ss_pred cCeeecCCCC-----CCcHHHHHHHhhHhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCC
Q 010058 77 KGLELIPSEN-----FTSVSVMQAVGSVMTNKYSEGYPGARYYGG-NEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLS 150 (519)
Q Consensus 77 ~~i~L~a~en-----~~~~~V~ea~~~~l~~~~~~g~p~~~~y~~-~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~s 150 (519)
..|++.++-. .-.|.|.+|+.+.+..-. .+ ..+++. ++.. ....+++.++...+.+. .....|
T Consensus 68 ~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~--~~--~~~~~~~~~~~----~~lAe~L~~~~p~~~~~---v~f~~s 136 (473)
T 4e3q_A 68 RYLDANSGLWNMVAGFDHKGLIDAAKAQYERFP--GY--HAFFGRMSDQT----VMLSEKLVEVSPFDSGR---VFYTNS 136 (473)
T ss_dssp EEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCC--CC--CCCTTEEEHHH----HHHHHHHHHHSSCSSCE---EEEESS
T ss_pred EEEEcccCHHHhhccCCCHHHHHHHHHHHHhcc--cc--cccccccCHHH----HHHHHHHHhhCCCCccE---EEEeCc
Confidence 3466654422 237899999988776521 01 112221 1211 22337777887655432 245567
Q ss_pred cHHHHHHHHHhhc-------CCC-CEEEEecCCCcc-ccccccccc---CC--ceeeeeeeeEEEeeee--C-CCCCCC-
Q 010058 151 GSPANFQVYTALL-------KPH-ERIMALDLPHGG-HLSHGYQTD---TK--KISAVSIFFETMPYRL--D-ESTGYI- 212 (519)
Q Consensus 151 Gs~a~~~~~~all-------~pG-D~Vl~~~~~~~~-~~~~~~~~~---~~--~v~~~g~~~~~v~~~~--d-~~~~~i- 212 (519)
|+.|+..++.... +++ .+|+...-.|-| ......... .+ ...+.+ +..++++. . .+.+..
T Consensus 137 GsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~ 214 (473)
T 4e3q_A 137 GSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPG--FVHLTCPHYWRYGEEGETE 214 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTT--EEEECCCCHHHHSCTTCCH
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCc--ccccCCCcccccccccchh
Confidence 7779888776532 233 467766544322 111000000 00 000111 11222210 0 011111
Q ss_pred ------CHHHHHHHhhhh---CCcEEEEcccc--ccc----cccHHHHHHHHhhcCCEEEehhhhhhhccc---------
Q 010058 213 ------DYEQLEKSAALF---RPKLIVAGASA--YAR----LYDYARIRKVCDKQKAVMLADMAHISGLVA--------- 268 (519)
Q Consensus 213 ------D~d~l~~~i~~~---k~klIi~~~sn--~g~----~~d~~~i~~ia~~~~~~livD~ah~~g~~~--------- 268 (519)
..+++++.+.+. +..+|++.|-. -|. ..-+++|+++|++||++||+|+.+. |+-.
T Consensus 215 ~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~t-GfGRtG~~fa~e~ 293 (473)
T 4e3q_A 215 EQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVIC-GFGRTGNTWGCVT 293 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTT-SSSTTSSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccc-cCCcccchhHHHh
Confidence 124455555432 34566666322 332 2238999999999999999999865 3211
Q ss_pred cCCCCCCCCCCeEEEEcCCCcccC--CCcceEEeecccccccccCcchhhhHHHHhhhc------ccCCCCCCccHHHHH
Q 010058 269 AGVIPSPFEYADVVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA------VFPGLQGGPHNHTIS 340 (519)
Q Consensus 269 ~~~~~~p~~~~di~~~S~~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~------~~~~~~g~~~~~~ia 340 (519)
.++ ..|+++++ |.|+| ...|.+++++ ++.+.+... ...+...+-+....+
T Consensus 294 ~gv------~PDi~t~~--K~l~gG~~Pl~av~~~~--------------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~A 351 (473)
T 4e3q_A 294 YDF------TPDAIISS--KNLTAGFFPMGAVILGP--------------ELSKRLETAIEAIEEFPHGFTASGHPVGCA 351 (473)
T ss_dssp TTC------CCSEEEEC--GGGGTTSSCCEEEEECH--------------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHH
T ss_pred cCC------CCChHHhc--ccccCCCCCcccccccH--------------HHHHHhccccccccccccCCCCCCCcchhh
Confidence 122 35999887 88854 3558888887 444443221 111222222344444
Q ss_pred HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHhc----CCEEecCCCCcceeeeeccC-C----CC-----cHHHHHHh
Q 010058 341 GLAVALKQVKTPEYKAYQEQVLSNSSKFARSLLER----GYDLVSGGTENHLVLVNLRN-K----GI-----DGSRVEKV 406 (519)
Q Consensus 341 al~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~v~~~~-~----~~-----~~~~~~~~ 406 (519)
+..+.|+.+.++ ...+++.+..++|.+.|+++ .+.-+.+ . ..+.-+++.. . .. -...+.+.
T Consensus 352 aala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG-~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~ 426 (473)
T 4e3q_A 352 IALKAIDVVMNE---GLAENVRRLAPRFEERLKHIAERPNIGEYRG-I-GFMWALEAVKDKASKTPFDGNLSVSERIANT 426 (473)
T ss_dssp HHHHHHHHHHHS---SHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE-E-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHH
T ss_pred hhhhhhhhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCeeEEee-c-ceEEEEEEecCccccccccccHHHHHHHHHH
Confidence 444566665443 34666777778888888765 2211111 1 1122233311 1 01 13457778
Q ss_pred hcccCeEEcccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHHH
Q 010058 407 LESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 407 L~~~gI~v~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~~ 461 (519)
+.+.|+.++. . .+.||+.++...| ++|++++++.|.++++.
T Consensus 427 ~~~~Gll~~~----~------g~~i~l~PPL~it----~~eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 427 CTDLGLICRP----L------GQSVVLCPPFILT----EAQMDEMFDKLEKALDK 467 (473)
T ss_dssp HHHTTEECEE----E------TTEEEECCCTTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHCCcEEEe----c------CCEEEEeCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 8889999862 1 2579999888777 89999999999998864
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.16 E-value=4.1e-10 Score=125.17 Aligned_cols=210 Identities=16% Similarity=0.127 Sum_probs=120.3
Q ss_pred HHHHHHhhh-------hCCcEEEEccc--cc-ccccc----HHHHHHHHhhcCCEEEehhhhhhhccccCCCCC--CCC-
Q 010058 215 EQLEKSAAL-------FRPKLIVAGAS--AY-ARLYD----YARIRKVCDKQKAVMLADMAHISGLVAAGVIPS--PFE- 277 (519)
Q Consensus 215 d~l~~~i~~-------~k~klIi~~~s--n~-g~~~d----~~~i~~ia~~~~~~livD~ah~~g~~~~~~~~~--p~~- 277 (519)
++|++.+.+ .++.+|++.+. +. |...+ +++|+++|++||+++|+|+++. |+-..|..-. -++
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~t-GfGRtG~~fa~e~~gv 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFT-GFWRLGVETTTELLGC 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTT-TTTTTSBSSTHHHHSS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCcc-ccccCCCchhhHhcCC
Confidence 567776652 24567777653 33 43332 8999999999999999999865 2211111000 000
Q ss_pred CCeEEEEcCCCcccC--CCcceEEeecccccccccCcchhhhHHHHhhhc-----ccCCCCCCccHHHHHHHHHHHHHhc
Q 010058 278 YADVVTTTTHKSLRG--PRGAMIFFRKGVKEINKQGQEVMYAYEDKINQA-----VFPGLQGGPHNHTISGLAVALKQVK 350 (519)
Q Consensus 278 ~~di~~~S~~K~l~G--prgG~i~~~~~~~~~~~~g~~~~~~~~~~i~~~-----~~~~~~g~~~~~~iaal~~al~~~~ 350 (519)
..|++|++ |.|+| .+.|++++++ ++.+.+... .+.+...+.+....++..++|+.+.
T Consensus 656 ~PDiitls--K~L~gG~~Plgav~~~~--------------~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~ 719 (831)
T 4a0g_A 656 KPDIACFA--KLLTGGMVPLAVTLATD--------------AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFK 719 (831)
T ss_dssp CCSEEEEC--GGGGTTSSCCEEEEECH--------------HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe--cccccCccCcEEEEECH--------------HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHH
Confidence 24888766 99976 3558899988 555544321 1122222334445555556677665
Q ss_pred CHhHHHHHHHHHHH--------HHHHHHHHHhcC-CEEecCCCCcceeeeeccCC-------CCcHHHHHHhhcccCeEE
Q 010058 351 TPEYKAYQEQVLSN--------SSKFARSLLERG-YDLVSGGTENHLVLVNLRNK-------GIDGSRVEKVLESVHIAA 414 (519)
Q Consensus 351 ~~~~~~~~~~~~~~--------~~~l~~~L~~~g-~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~~~L~~~gI~v 414 (519)
++.+ .+++.++ .+.+.+.+.+.. +..+.+ . ..+..+.+... ......+.+.|.+.||.+
T Consensus 720 ~~~l---~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg-~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v 794 (831)
T 4a0g_A 720 DPET---NHNITSQGKTLRELWDEELVQQISSHSAVQRVVV-I-GTLFALELKADASNSGYASLYAKSLLIMLREDGIFT 794 (831)
T ss_dssp CTTT---CTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEE-E-TTEEEEEEC---------CHHHHHHHHHHHHTTEEC
T ss_pred hhHH---HHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEee-c-ccEEEEEEecCccccccchHHHHHHHHHHHHCCcEE
Confidence 4332 1222111 123445555552 322222 1 22444444221 112445777888899999
Q ss_pred cccccCCCCCCCCCCeEEeccCccccCCCCHHHHHHHHHHHHHHHH
Q 010058 415 NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFEKVAEFFDAAVK 460 (519)
Q Consensus 415 ~~~~~p~~~~~~~~~~iRi~~~~~ttrg~~~~di~~l~~~l~~~l~ 460 (519)
+ |. .+.|||.++..++ ++|++++++.|.++++
T Consensus 795 ~----p~------g~~lrl~pp~~~t----~e~id~~~~~l~~~l~ 826 (831)
T 4a0g_A 795 R----PL------GNVIYLMCGPCTS----PEICRRLLTKLYKRLG 826 (831)
T ss_dssp C----CB------TTEEEEECCTTCC----HHHHHHHHHHHHHHHT
T ss_pred E----ec------CCEEEEECCCCCC----HHHHHHHHHHHHHHHH
Confidence 6 32 3689999888888 9999999999998875
No 237
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=48.69 E-value=1.4e+02 Score=26.25 Aligned_cols=50 Identities=22% Similarity=0.213 Sum_probs=34.2
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEec
Q 010058 115 GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALD 173 (519)
Q Consensus 115 ~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~ 173 (519)
.|.+..+..-+++.++++++ |.+. +-|..++|.+|.. ++..+ .| +|++..
T Consensus 31 ~G~eNT~~tl~la~era~e~-~Ik~----iVVASssG~TA~k-~~e~~--~~-~lVvVT 80 (206)
T 1t57_A 31 PGKENTERVLELVGERADQL-GIRN----FVVASVSGETALR-LSEMV--EG-NIVSVT 80 (206)
T ss_dssp CSGGGHHHHHHHHHHHHHHH-TCCE----EEEECSSSHHHHH-HHTTC--CS-EEEEEC
T ss_pred CCcccHHHHHHHHHHHHHHc-CCCE----EEEEeCCCHHHHH-HHHHc--cC-CEEEEe
Confidence 45577788878888888876 6665 4566678888766 44444 45 777665
No 238
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=45.53 E-value=12 Score=28.89 Aligned_cols=15 Identities=13% Similarity=0.392 Sum_probs=11.2
Q ss_pred hhhhCCcEEEEcccc
Q 010058 221 AALFRPKLIVAGASA 235 (519)
Q Consensus 221 i~~~k~klIi~~~sn 235 (519)
+..++|++|++...|
T Consensus 74 ~~~~~P~vV~vd~~N 88 (96)
T 1vc3_B 74 ARNLKPTVVLVDERN 88 (96)
T ss_dssp HTTCCCEEEEECTTC
T ss_pred HhcCCCEEEEECCCC
Confidence 345799999998655
No 239
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=45.52 E-value=7.4 Score=30.28 Aligned_cols=14 Identities=21% Similarity=0.586 Sum_probs=10.6
Q ss_pred hhhCCcEEEEcccc
Q 010058 222 ALFRPKLIVAGASA 235 (519)
Q Consensus 222 ~~~k~klIi~~~sn 235 (519)
..++|++|++...|
T Consensus 74 ~~~~P~vv~vd~~N 87 (102)
T 3plx_B 74 KTFKPKVVFVDENN 87 (102)
T ss_dssp HHCCCEEEEECTTS
T ss_pred hcCCCEEEEECCCC
Confidence 34799999998655
No 240
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=41.89 E-value=42 Score=28.50 Aligned_cols=42 Identities=17% Similarity=-0.046 Sum_probs=33.1
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ 252 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~ 252 (519)
.+.++++.+.+.+.+|.+|.++..++.....++++.+.+++.
T Consensus 55 ~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 55 RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLREL 96 (161)
T ss_dssp BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhc
Confidence 467899999988889999999876666666677777777764
No 241
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=39.53 E-value=28 Score=28.71 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=11.3
Q ss_pred hhhhCCcEEEEcccc
Q 010058 221 AALFRPKLIVAGASA 235 (519)
Q Consensus 221 i~~~k~klIi~~~sn 235 (519)
+..++|++|+++..|
T Consensus 115 ~~~~~P~VV~vd~~N 129 (143)
T 1pqh_A 115 ARTWRPNVAYFEGDN 129 (143)
T ss_dssp HTTCCCEEEEEETTT
T ss_pred hccCCCeEEEECCCC
Confidence 345789999998666
No 242
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=39.28 E-value=26 Score=26.94 Aligned_cols=14 Identities=7% Similarity=0.394 Sum_probs=10.6
Q ss_pred hhhCCcEEEEcccc
Q 010058 222 ALFRPKLIVAGASA 235 (519)
Q Consensus 222 ~~~k~klIi~~~sn 235 (519)
..++|++|++...|
T Consensus 73 ~~~~P~vV~vd~~N 86 (97)
T 1uhe_A 73 NAHKPSIVLVDEKN 86 (97)
T ss_dssp HHCCCEEEEECTTS
T ss_pred hcCCCEEEEECCCC
Confidence 34799999998655
No 243
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=38.97 E-value=2e+02 Score=25.21 Aligned_cols=51 Identities=18% Similarity=0.150 Sum_probs=34.8
Q ss_pred CCchhHHHHHHHHHHHHHHHcCCCCCCCcceEEeCCcHHHHHHHHHhhcCCCCEEEEec
Q 010058 115 GGNEYIDMAESLCQKRALDAFQLDPAKWGVNVQSLSGSPANFQVYTALLKPHERIMALD 173 (519)
Q Consensus 115 ~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~V~~~sGs~a~~~~~~all~pGD~Vl~~~ 173 (519)
+|.+..+..-+++.+++.++ |.+. +-|..++|.+|.. ++..+ .|=+|++..
T Consensus 23 ~G~eNT~~tl~la~era~e~-~Ik~----iVVAS~sG~TA~k-~~e~~--~~i~lVvVT 73 (201)
T 1vp8_A 23 PGRENTEETLRLAVERAKEL-GIKH----LVVASSYGDTAMK-ALEMA--EGLEVVVVT 73 (201)
T ss_dssp CSGGGHHHHHHHHHHHHHHH-TCCE----EEEECSSSHHHHH-HHHHC--TTCEEEEEE
T ss_pred CCcccHHHHHHHHHHHHHHc-CCCE----EEEEeCCChHHHH-HHHHh--cCCeEEEEe
Confidence 45577788878888888876 6665 4566778888766 44544 565666654
No 244
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=38.06 E-value=1.7e+02 Score=28.77 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=52.1
Q ss_pred CCHHHHHHHhh----hhCCcEEEE-cccccc---ccccHHHHHHHHhhc-CCEEEehhhhhhh-cccc-CCCCCCCCCCe
Q 010058 212 IDYEQLEKSAA----LFRPKLIVA-GASAYA---RLYDYARIRKVCDKQ-KAVMLADMAHISG-LVAA-GVIPSPFEYAD 280 (519)
Q Consensus 212 iD~d~l~~~i~----~~k~klIi~-~~sn~g---~~~d~~~i~~ia~~~-~~~livD~ah~~g-~~~~-~~~~~p~~~~d 280 (519)
-++++++.++. ..+..++++ |.+.|+ ...|+..|..+.+.+ ++.| .|..|..| .... .-... ++|
T Consensus 168 aTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~~~~~~AAvAl---GA~ 243 (385)
T 1vli_A 168 AEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHPTEAPCAAVRL---GAK 243 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSSSSHHHHHHHHT---TCS
T ss_pred CCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCchHHHHHHHHc---CCC
Confidence 36777776653 223466665 355576 456788999998888 8887 67778877 2211 00011 567
Q ss_pred EEE--EcCCCcccCCCcceEEeec
Q 010058 281 VVT--TTTHKSLRGPRGAMIFFRK 302 (519)
Q Consensus 281 i~~--~S~~K~l~GprgG~i~~~~ 302 (519)
++= ++..|++.|+-+..-+.++
T Consensus 244 iIEkHftldra~~G~D~~~SL~P~ 267 (385)
T 1vli_A 244 LIEKHFTIDKNLPGADHSFALNPD 267 (385)
T ss_dssp EEEEEBCSCTTSSCSSCTTSBCHH
T ss_pred EEEeCCCccccCCCCchhhhCCHH
Confidence 653 4567877777654433333
No 245
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=31.43 E-value=76 Score=26.40 Aligned_cols=42 Identities=19% Similarity=0.264 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCchhhHHhhhccccchHHHHHHHHHHHHHHHhcCCC-CCC
Q 010058 445 EEDFEKVAEFFDAAVKLALKIKGDTKGTKLKDFVATLMSDESIQSEISNLRDKVEEYAKRFPT-VGF 510 (519)
Q Consensus 445 ~~di~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~-~~~ 510 (519)
++|.+.+-+.|..+++.+.+ ..-+..+++..+++.-+++ |||
T Consensus 100 peD~E~LeDLI~aAvNdA~~------------------------ka~e~~~e~M~~ltgGl~lpPG~ 142 (143)
T 1ybx_A 100 PDDVEMLQDLILAAVNEALR------------------------KADEMVTAEISKITGGLGGIPGL 142 (143)
T ss_dssp TTCHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHC---------
T ss_pred CcCHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHhCCCCCCCCC
Confidence 48899999999988886532 2234567778888888887 775
No 246
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=30.77 E-value=86 Score=24.10 Aligned_cols=52 Identities=13% Similarity=-0.106 Sum_probs=33.6
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc----HHHHHHHHhhcCCE-EEehhh
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD----YARIRKVCDKQKAV-MLADMA 261 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d----~~~i~~ia~~~~~~-livD~a 261 (519)
..-+++.|.+.+.++++..||++ |-| .|...+ ..++++..++.++. .++|+-
T Consensus 36 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DER 94 (98)
T 1iv0_A 36 LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDER 94 (98)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 44578999999999999999999 655 453333 34444333222654 557774
No 247
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=30.75 E-value=90 Score=27.50 Aligned_cols=50 Identities=6% Similarity=0.070 Sum_probs=36.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcC----CEEEehh
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQK----AVMLADM 260 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~----~~livD~ 260 (519)
.+..+++.+.+.+.+|++|.++..++.....++++.+.+++.+ +.+++=+
T Consensus 125 ~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG 178 (210)
T 1y80_A 125 DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGG 178 (210)
T ss_dssp SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEES
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEC
Confidence 4678999999988899999998666555556777777776644 5555543
No 248
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=30.70 E-value=70 Score=26.17 Aligned_cols=42 Identities=19% Similarity=0.177 Sum_probs=30.0
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhc
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQ 252 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~ 252 (519)
...++++.+++.+.++++|.++.+.......++++.+..++.
T Consensus 40 ~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~ 81 (137)
T 1ccw_A 40 LSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEA 81 (137)
T ss_dssp EECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHT
T ss_pred CCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhc
Confidence 356889888888889999999866655444566666666553
No 249
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=28.40 E-value=1.2e+02 Score=28.04 Aligned_cols=50 Identities=10% Similarity=0.206 Sum_probs=36.7
Q ss_pred CCCHHHHHHHhhhhCCcEEEEcccccc---ccccHHHHHHHHhhcC----CEEEehh
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYA---RLYDYARIRKVCDKQK----AVMLADM 260 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g---~~~d~~~i~~ia~~~~----~~livD~ 260 (519)
.+..+++.+++.++++.+|.++...+. ....+.++.+.+++.+ +.+++=+
T Consensus 166 ~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG 222 (262)
T 1xrs_B 166 QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGG 222 (262)
T ss_dssp SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEEC
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 478999999998889999999866655 5556677777777654 5565543
No 250
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=26.05 E-value=29 Score=35.08 Aligned_cols=28 Identities=7% Similarity=0.204 Sum_probs=25.2
Q ss_pred ccccccccHHHHHHHHhhcCCEEEehhh
Q 010058 234 SAYARLYDYARIRKVCDKQKAVMLADMA 261 (519)
Q Consensus 234 sn~g~~~d~~~i~~ia~~~~~~livD~a 261 (519)
+.+|...+++++++-|++.|+.||+|..
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4478888999999999999999999975
No 251
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=24.61 E-value=73 Score=23.50 Aligned_cols=43 Identities=14% Similarity=-0.004 Sum_probs=30.9
Q ss_pred HHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEe
Q 010058 214 YEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLA 258 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~liv 258 (519)
..+..++++..+.++|++.....+ .-.+.|..+|+++++.++.
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~lc~~~~Ip~~~ 58 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKDADP--ILTSSVVSLAEDQGISVSM 58 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETTSCH--HHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCH--HHHHHHHHHHHHcCCCEEE
Confidence 567778888767888887533233 3467888999999987664
No 252
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=24.06 E-value=1.4e+02 Score=23.81 Aligned_cols=46 Identities=9% Similarity=0.187 Sum_probs=30.5
Q ss_pred CCHHHHHHHhhh--------hCCcEEEEccccccccccHHHHHHHHhhcCCEEE
Q 010058 212 IDYEQLEKSAAL--------FRPKLIVAGASAYARLYDYARIRKVCDKQKAVML 257 (519)
Q Consensus 212 iD~d~l~~~i~~--------~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~li 257 (519)
.|++.+.+.+.+ ++-.-|++..+......|+.++.++++++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 466666655542 1334566664443345789999999999998875
No 253
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=23.72 E-value=67 Score=22.00 Aligned_cols=21 Identities=14% Similarity=0.366 Sum_probs=15.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 010058 441 RGFVEEDFEKVAEFFDAAVKL 461 (519)
Q Consensus 441 rg~~~~di~~l~~~l~~~l~~ 461 (519)
||..+++++.+.+.+.+-+..
T Consensus 18 rGY~~~EVD~FLd~v~~~~~~ 38 (57)
T 2wuj_A 18 RGYDEDEVNEFLAQVRKDYEI 38 (57)
T ss_dssp TEEEHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHH
Confidence 466679999888888776654
No 254
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=23.19 E-value=90 Score=26.09 Aligned_cols=53 Identities=15% Similarity=0.069 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHhhhhCCcEEEEc-ccc-cccccc-H---HHHH-HHHhhcCC-EEEehhhh
Q 010058 210 GYIDYEQLEKSAALFRPKLIVAG-ASA-YARLYD-Y---ARIR-KVCDKQKA-VMLADMAH 262 (519)
Q Consensus 210 ~~iD~d~l~~~i~~~k~klIi~~-~sn-~g~~~d-~---~~i~-~ia~~~~~-~livD~ah 262 (519)
..-+++.|.+.+.+++|..|+++ |-+ +|.... . +.+. .++++.++ +.++|+..
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~ 100 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERL 100 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSS
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCC
Confidence 45689999999999999999999 544 554332 2 3333 34444565 46688863
No 255
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=23.02 E-value=1.6e+02 Score=23.59 Aligned_cols=48 Identities=8% Similarity=-0.043 Sum_probs=35.2
Q ss_pred CCCHHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEEeh
Q 010058 211 YIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLAD 259 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~livD 259 (519)
.++.++++..+.. +|.+|+++.-..+....-+++++..++.|+-+-+-
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m 95 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVL 95 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEE
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEe
Confidence 4888999988886 89999998444454424467788888888765543
No 256
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=22.44 E-value=1.4e+02 Score=23.78 Aligned_cols=45 Identities=13% Similarity=0.232 Sum_probs=31.4
Q ss_pred HHHHHHHhhhhCCcEEEEcccccccccc-HHHHHHHHhhcCCEEE-ehh
Q 010058 214 YEQLEKSAALFRPKLIVAGASAYARLYD-YARIRKVCDKQKAVML-ADM 260 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d-~~~i~~ia~~~~~~li-vD~ 260 (519)
..+..+++...+.++|++.....+ .+ ...|..+|++++++++ ++.
T Consensus 25 ~~~v~kai~~gkakLViiA~D~~~--~~~~~~l~~lc~~~~VP~~~v~s 71 (121)
T 2lbw_A 25 VKEVVKALRKGEKGLVVIAGDIWP--ADVISHIPVLCEDHSVPYIFIPS 71 (121)
T ss_dssp HHHHHHHHHHSCCCEEEECTTCSC--TTHHHHHHHHHHHTCCCEEECCC
T ss_pred HHHHHHHHHcCCceEEEEeCCCCH--HHHHHHHHHHHHhcCCcEEEECC
Confidence 566777787778888888532222 33 6778899999999864 443
No 257
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=22.05 E-value=1e+02 Score=29.89 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=38.6
Q ss_pred CCHHHHHHHhh----hhCCcEEEEc-----cccc-cccccHHHHHHHHhhcCCEEEehhhhhhh
Q 010058 212 IDYEQLEKSAA----LFRPKLIVAG-----ASAY-ARLYDYARIRKVCDKQKAVMLADMAHISG 265 (519)
Q Consensus 212 iD~d~l~~~i~----~~k~klIi~~-----~sn~-g~~~d~~~i~~ia~~~~~~livD~ah~~g 265 (519)
.+++++..++. ..++.+++|- +++| ....|+..|..+.+..++.+++|..|..|
T Consensus 224 ~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 224 NTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 47777776654 3467787762 2233 35567888888888779999999999877
No 258
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.18 E-value=1.3e+02 Score=22.87 Aligned_cols=42 Identities=12% Similarity=-0.062 Sum_probs=30.5
Q ss_pred HHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEE
Q 010058 214 YEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVML 257 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~li 257 (519)
++++.+++...+.++|++... .+ ..-.+.|..+|+++++.++
T Consensus 20 ~~~v~kai~~gka~lViiA~D-~~-~~~~~~i~~~c~~~~ip~~ 61 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAKN-AP-KEIKDDIYYYAKLSDIPVY 61 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEECC-CC-HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCccEEEEeCC-CC-HHHHHHHHHHHHHcCCCEE
Confidence 567788888778898888533 22 3346788889999998864
No 259
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=21.11 E-value=46 Score=24.88 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=18.5
Q ss_pred cHHHHHHHHhhcCCEEEehhh
Q 010058 241 DYARIRKVCDKQKAVMLADMA 261 (519)
Q Consensus 241 d~~~i~~ia~~~~~~livD~a 261 (519)
--.+|+++|+++|+.++.|..
T Consensus 28 ~A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 28 KALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHHcCCCEEeCHH
Confidence 357999999999999999964
No 260
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=20.86 E-value=1.2e+02 Score=26.93 Aligned_cols=49 Identities=10% Similarity=0.074 Sum_probs=35.5
Q ss_pred CCCHHHHHHHhhhhCCcEEEE--ccccccccccHHHHHHHHhhcC----CEEEeh
Q 010058 211 YIDYEQLEKSAALFRPKLIVA--GASAYARLYDYARIRKVCDKQK----AVMLAD 259 (519)
Q Consensus 211 ~iD~d~l~~~i~~~k~klIi~--~~sn~g~~~d~~~i~~ia~~~~----~~livD 259 (519)
.+.++++.+.+.+++|++|.+ +...++....++++.+.+++.+ +.+++=
T Consensus 129 ~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vG 183 (215)
T 3ezx_A 129 DVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFG 183 (215)
T ss_dssp SCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 467899988888889999999 5544555566788877777654 455543
No 261
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=20.54 E-value=48 Score=32.79 Aligned_cols=28 Identities=14% Similarity=0.205 Sum_probs=25.3
Q ss_pred ccccccccHHHHHHHHhhcCCEEEehhh
Q 010058 234 SAYARLYDYARIRKVCDKQKAVMLADMA 261 (519)
Q Consensus 234 sn~g~~~d~~~i~~ia~~~~~~livD~a 261 (519)
+.+|...+++++++-|+++|+-||.|..
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5578888999999999999999999975
No 262
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=20.51 E-value=59 Score=26.67 Aligned_cols=14 Identities=14% Similarity=0.510 Sum_probs=10.4
Q ss_pred hhhCCcEEEEcccc
Q 010058 222 ALFRPKLIVAGASA 235 (519)
Q Consensus 222 ~~~k~klIi~~~sn 235 (519)
..++|++|+++..|
T Consensus 99 ~~~~P~vV~vd~~N 112 (139)
T 2c45_A 99 RTYQPRIVFVDAYN 112 (139)
T ss_dssp HSCCCEEEECCTTC
T ss_pred ccCCCeEEEECCCC
Confidence 44789998888655
No 263
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=20.21 E-value=1.7e+02 Score=23.64 Aligned_cols=46 Identities=4% Similarity=0.104 Sum_probs=30.9
Q ss_pred HHHHHHHhhhhCCcEEEEccccccccccHHHHHHHHhhcCCEEE-ehh
Q 010058 214 YEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVML-ADM 260 (519)
Q Consensus 214 ~d~l~~~i~~~k~klIi~~~sn~g~~~d~~~i~~ia~~~~~~li-vD~ 260 (519)
..+..+++...+.+++++.. +.....-...|..+|.++++.++ ++.
T Consensus 29 ~~~v~Kai~~gka~LViiA~-D~~p~~~~~~i~~lc~~~~Ip~~~v~s 75 (126)
T 2xzm_U 29 LHEVLRTIEAKQALFVCVAE-DCDQGNYVKLVKALCAKNEIKYVSVPK 75 (126)
T ss_dssp HHHHHHHHHHTCCSEEEEES-SCCSTTHHHHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHcCCceEEEEeC-CCChHHHHHHHHHHHHHhCCCEEEECC
Confidence 45666777777888888853 22222335788899999998765 443
Done!