Query 010059
Match_columns 519
No_of_seqs 256 out of 1520
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 18:59:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u6z_A Exopolyphosphatase; alp 100.0 2E-102 8E-107 839.4 53.4 471 1-516 1-475 (513)
2 3hi0_A Putative exopolyphospha 100.0 1.5E-99 5E-104 816.2 42.1 460 12-516 14-480 (508)
3 3mdq_A Exopolyphosphatase; str 100.0 8.3E-70 2.8E-74 552.1 37.0 303 13-332 4-311 (315)
4 3cer_A Possible exopolyphospha 100.0 9.5E-68 3.3E-72 542.0 31.9 312 4-331 7-339 (343)
5 1t6c_A Exopolyphosphatase; alp 100.0 3.3E-66 1.1E-70 525.0 34.0 296 13-331 12-311 (315)
6 3rf0_A Exopolyphosphatase; str 100.0 6.3E-37 2.2E-41 292.7 17.7 160 340-516 3-166 (209)
7 3aap_A Ectonucleoside triphosp 100.0 8.4E-30 2.9E-34 261.4 13.4 154 13-177 3-178 (353)
8 3cj1_A Ectonucleoside triphosp 99.9 5.6E-25 1.9E-29 232.2 13.5 149 13-164 34-211 (456)
9 3zx3_A Ectonucleoside triphosp 99.8 1.6E-20 5.5E-25 196.7 14.5 148 14-164 34-202 (452)
10 3h1q_A Ethanolamine utilizatio 99.7 3E-17 1E-21 162.3 15.5 153 11-183 26-179 (272)
11 4a57_A Nucleoside-triphosphata 98.4 1.5E-06 5.2E-11 91.0 11.4 74 88-161 158-265 (611)
12 2ych_A Competence protein PILM 98.2 1.6E-05 5.4E-10 81.6 15.7 71 112-183 161-231 (377)
13 4a2a_A Cell division protein F 98.2 8.7E-06 3E-10 85.2 12.4 39 144-182 207-245 (419)
14 2pq7_A Predicted HD superfamil 97.8 0.00014 4.7E-09 69.1 11.1 99 359-490 34-136 (220)
15 4gni_A Putative heat shock pro 97.3 0.0023 7.7E-08 66.2 14.0 77 104-182 166-249 (409)
16 3tm8_A BD1817, uncharacterized 97.3 0.00085 2.9E-08 67.6 9.8 102 361-490 169-289 (328)
17 3b57_A LIN1889 protein; Q92AN1 97.1 0.002 6.8E-08 60.5 9.5 77 360-455 27-103 (209)
18 3ccg_A HD superfamily hydrolas 97.0 0.0032 1.1E-07 58.2 10.1 93 361-493 22-137 (190)
19 1k8k_A ARP3, actin-like protei 96.9 0.007 2.4E-07 62.7 12.9 99 82-182 101-204 (418)
20 3dto_A BH2835 protein; all alp 96.9 0.0038 1.3E-07 59.3 9.6 78 359-455 26-103 (223)
21 2qgs_A Protein Se1688; alpha-h 96.9 0.0046 1.6E-07 58.8 10.2 78 359-456 26-104 (225)
22 2o08_A BH1327 protein; putativ 96.9 0.004 1.4E-07 57.4 9.4 93 361-493 21-135 (188)
23 3qfu_A 78 kDa glucose-regulate 96.8 0.0075 2.6E-07 61.7 12.5 109 70-182 136-250 (394)
24 2d0o_A DIOL dehydratase-reacti 96.8 0.0037 1.3E-07 66.0 9.9 77 103-182 370-446 (610)
25 1nbw_A Glycerol dehydratase re 96.8 0.004 1.4E-07 65.9 9.7 76 104-182 373-448 (607)
26 2pjq_A Uncharacterized protein 96.8 0.0021 7.1E-08 61.5 7.0 78 359-455 31-108 (231)
27 2ogi_A Hypothetical protein SA 96.6 0.0054 1.8E-07 57.0 8.6 93 361-493 29-143 (196)
28 3djb_A Hydrolase, HD family; a 96.6 0.0043 1.5E-07 58.9 7.6 78 359-455 26-103 (223)
29 2fxu_A Alpha-actin-1, actin, a 96.5 0.017 5.8E-07 59.0 12.4 93 81-182 93-189 (375)
30 1jce_A ROD shape-determining p 96.1 0.048 1.6E-06 54.7 12.8 74 105-182 112-186 (344)
31 2v7y_A Chaperone protein DNAK; 96.0 0.11 3.6E-06 55.4 15.5 108 69-182 91-205 (509)
32 2zgy_A Plasmid segregation pro 95.9 0.14 4.7E-06 50.9 14.8 96 83-182 90-206 (320)
33 3gw7_A Uncharacterized protein 95.5 0.0039 1.3E-07 59.8 1.6 77 360-455 27-110 (239)
34 2qm1_A Glucokinase; alpha-beta 95.3 0.29 9.9E-06 48.4 14.9 141 4-168 2-159 (326)
35 2fsj_A Hypothetical protein TA 95.3 0.025 8.4E-07 57.2 6.8 62 117-181 165-232 (346)
36 3hc1_A Uncharacterized HDOD do 95.0 0.045 1.5E-06 54.2 7.5 95 361-493 121-245 (305)
37 2q14_A Phosphohydrolase; BT420 94.9 0.039 1.3E-06 57.0 7.1 60 361-430 58-127 (410)
38 4apw_A ALP12; actin-like prote 94.6 0.033 1.1E-06 55.9 5.6 41 142-182 171-213 (329)
39 3i33_A Heat shock-related 70 k 94.5 0.18 6.2E-06 51.5 11.0 110 70-182 141-258 (404)
40 1hux_A Activator of (R)-2-hydr 94.4 0.45 1.6E-05 46.0 13.1 115 14-166 4-119 (270)
41 3qb0_A Actin-related protein 4 94.4 0.19 6.5E-06 53.2 11.0 151 15-182 25-203 (498)
42 1yuw_A Heat shock cognate 71 k 94.1 0.29 1E-05 52.6 12.0 109 69-181 121-236 (554)
43 1dkg_D Molecular chaperone DNA 93.8 0.21 7.2E-06 50.7 9.7 109 69-182 117-236 (383)
44 3u1n_A SAM domain and HD domai 93.7 0.14 4.9E-06 54.0 8.3 46 361-414 68-113 (528)
45 3irh_A HD domain protein; phos 93.6 0.093 3.2E-06 54.9 6.4 67 361-430 89-163 (480)
46 2hek_A Hypothetical protein; p 93.5 0.13 4.6E-06 52.3 7.5 76 361-453 53-142 (371)
47 1zc6_A Probable N-acetylglucos 93.5 1.3 4.3E-05 43.4 14.4 129 13-166 11-145 (305)
48 3js6_A Uncharacterized PARM pr 93.4 0.07 2.4E-06 54.1 5.2 64 117-182 156-225 (355)
49 4b9q_A Chaperone protein DNAK; 93.2 0.48 1.7E-05 51.4 11.9 110 68-182 116-236 (605)
50 3sk9_A Putative uncharacterize 92.5 0.15 5.1E-06 49.5 5.8 89 361-459 28-149 (265)
51 3d2f_A Heat shock protein homo 92.4 1.1 3.6E-05 49.4 13.3 112 68-182 119-241 (675)
52 3i7a_A Putative metal-dependen 92.2 0.39 1.3E-05 46.7 8.5 98 361-491 120-238 (281)
53 4ehu_A Activator of 2-hydroxyi 91.7 1.9 6.6E-05 41.3 12.9 113 14-165 2-116 (276)
54 1k8k_B ARP2, actin-like protei 91.6 0.11 3.7E-06 53.4 3.9 92 83-182 99-193 (394)
55 2kho_A Heat shock protein 70; 91.4 0.82 2.8E-05 49.6 10.7 109 69-182 117-236 (605)
56 2ch5_A NAGK protein; transfera 91.2 2.2 7.4E-05 42.4 13.0 140 14-176 7-152 (347)
57 1vqr_A Hypothetical protein CJ 91.0 0.51 1.8E-05 46.2 7.9 38 361-415 127-164 (297)
58 2dqb_A Deoxyguanosinetriphosph 90.4 0.7 2.4E-05 47.0 8.4 75 361-454 78-172 (376)
59 3dwl_A Actin-related protein 3 90.1 1.1 3.6E-05 46.6 9.7 100 81-183 116-221 (427)
60 4fo0_A Actin-related protein 8 90.1 2.6 8.9E-05 45.2 13.3 110 65-182 170-287 (593)
61 2ews_A Pantothenate kinase; PA 89.9 8.1 0.00028 37.6 15.3 128 11-182 18-148 (287)
62 3zyy_X Iron-sulfur cluster bin 89.6 0.33 1.1E-05 52.6 5.6 158 16-176 209-402 (631)
63 2hoe_A N-acetylglucosamine kin 89.3 6.8 0.00023 39.5 15.0 134 13-167 87-236 (380)
64 3ezw_A Glycerol kinase; glycer 86.5 1.7 6E-05 46.1 8.8 77 12-97 3-82 (526)
65 4e1j_A Glycerol kinase; struct 86.1 2.6 9E-05 44.7 9.9 76 12-96 25-103 (520)
66 3r8e_A Hypothetical sugar kina 85.4 4.2 0.00014 39.9 10.4 135 13-168 19-169 (321)
67 1z05_A Transcriptional regulat 85.3 15 0.00051 37.6 15.0 135 13-167 108-258 (429)
68 3mem_A Putative signal transdu 83.8 4.2 0.00014 42.3 10.0 42 361-416 281-322 (457)
69 3bg2_A DGTP triphosphohydrolas 83.4 1.2 3.9E-05 46.4 5.4 92 361-455 67-196 (444)
70 1z6r_A MLC protein; transcript 83.2 14 0.00048 37.4 13.6 135 13-167 85-236 (406)
71 3vgl_A Glucokinase; ROK family 82.8 7.4 0.00025 38.1 11.0 131 14-168 3-147 (321)
72 1saz_A Probable butyrate kinas 82.8 3.5 0.00012 41.8 8.7 141 14-169 3-201 (381)
73 4am6_A Actin-like protein ARP8 82.5 4.7 0.00016 43.7 9.8 111 65-182 192-311 (655)
74 2pgs_A Putative deoxyguanosine 82.4 1.5 5E-05 45.7 5.7 47 361-414 65-114 (451)
75 3m1t_A Putative phosphohydrola 82.1 2.5 8.5E-05 40.8 6.9 38 361-416 108-145 (275)
76 4db3_A Glcnac kinase, N-acetyl 80.7 16 0.00055 35.8 12.6 135 14-168 25-171 (327)
77 4bc3_A Xylulose kinase; transf 80.3 3.8 0.00013 43.5 8.3 78 13-95 10-97 (538)
78 3ljx_A MMOQ response regulator 80.2 5 0.00017 39.0 8.4 38 361-415 111-148 (288)
79 2ivn_A O-sialoglycoprotein end 79.6 49 0.0017 32.5 18.0 149 15-181 3-160 (330)
80 1zbs_A Hypothetical protein PG 78.5 20 0.00068 34.4 12.2 128 15-166 2-132 (291)
81 3hz6_A Xylulokinase; xylulose, 77.8 5.9 0.0002 41.8 8.8 74 13-96 5-81 (511)
82 3ifr_A Carbohydrate kinase, FG 77.4 4.8 0.00017 42.4 7.9 76 13-97 7-85 (508)
83 2ap1_A Putative regulator prot 76.8 33 0.0011 33.3 13.5 135 12-168 23-171 (327)
84 2e2o_A Hexokinase; acetate and 76.7 24 0.0008 33.9 12.2 115 14-154 3-118 (299)
85 2p3r_A Glycerol kinase; glycer 75.9 8.1 0.00028 40.7 9.1 75 13-96 3-80 (510)
86 3g25_A Glycerol kinase; IDP007 75.4 7.8 0.00027 40.7 8.9 74 13-95 6-82 (501)
87 3h3n_X Glycerol kinase; ATP-bi 75.3 8.3 0.00028 40.6 9.0 74 13-95 5-81 (506)
88 2zf5_O Glycerol kinase; hypert 75.3 7.5 0.00026 40.8 8.6 76 13-97 3-81 (497)
89 2yhw_A Bifunctional UDP-N-acet 74.0 51 0.0017 32.2 14.1 135 13-168 30-182 (343)
90 3m5f_A Metal dependent phospho 72.4 3.7 0.00013 38.8 4.8 58 398-456 55-127 (244)
91 1woq_A Inorganic polyphosphate 72.1 65 0.0022 30.2 14.7 141 14-168 13-166 (267)
92 2aa4_A Mannac kinase, putative 71.4 22 0.00074 33.9 10.4 131 15-168 3-146 (289)
93 3epq_A Putative fructokinase; 71.3 55 0.0019 31.6 13.4 127 13-168 3-148 (302)
94 3djc_A Type III pantothenate k 71.0 20 0.00067 34.4 9.8 129 15-166 4-148 (266)
95 3htv_A D-allose kinase, alloki 70.7 34 0.0012 33.2 11.7 143 13-177 7-169 (310)
96 3vov_A Glucokinase, hexokinase 70.0 64 0.0022 30.9 13.5 133 14-168 2-149 (302)
97 3ll3_A Gluconate kinase; xylul 69.0 12 0.00042 39.2 8.5 71 13-95 4-77 (504)
98 3l0q_A Xylulose kinase; xlylul 67.4 10 0.00035 40.3 7.6 73 13-95 5-81 (554)
99 2gup_A ROK family protein; sug 67.1 43 0.0015 31.8 11.5 125 15-168 6-143 (292)
100 2d4w_A Glycerol kinase; alpha 66.9 18 0.00061 37.9 9.3 75 14-97 3-80 (504)
101 3kq5_A Hypothetical cytosolic 64.3 5.4 0.00018 40.3 4.2 41 361-415 78-119 (393)
102 2w40_A Glycerol kinase, putati 64.2 15 0.00053 38.4 8.1 77 13-96 4-83 (503)
103 2dpn_A Glycerol kinase; thermu 63.7 16 0.00055 38.1 8.1 73 14-95 3-78 (495)
104 1vhx_A Putative holliday junct 62.3 6.2 0.00021 34.5 3.9 86 14-122 4-97 (150)
105 3aql_A Poly(A) polymerase; tra 60.5 7.2 0.00025 40.1 4.6 54 400-453 287-351 (415)
106 1taz_A Calcium/calmodulin-depe 60.3 25 0.00085 35.4 8.4 42 361-413 85-126 (365)
107 3jvp_A Ribulokinase; PSI-II, N 60.3 12 0.00042 39.9 6.6 78 13-96 5-94 (572)
108 2cqz_A 177AA long hypothetical 59.7 10 0.00035 34.0 4.9 42 360-414 34-75 (177)
109 2r8q_A Class I phosphodiestera 57.9 24 0.00084 35.3 7.9 42 361-413 103-144 (359)
110 3h6e_A Carbohydrate kinase, FG 57.7 14 0.00047 38.7 6.2 25 13-39 6-30 (482)
111 2ibn_A Inositol oxygenase; red 57.3 3.6 0.00012 38.7 1.4 25 400-424 79-103 (250)
112 2h3g_X Biosynthetic protein; p 56.2 57 0.0019 31.1 9.9 129 15-166 2-146 (268)
113 1tbf_A CGMP-specific 3',5'-cyc 55.7 29 0.001 34.5 8.0 42 361-413 104-145 (347)
114 1f0j_A PDE4B, phosphodiesteras 55.2 23 0.0008 35.7 7.2 42 361-413 86-127 (377)
115 3mcp_A Glucokinase; structural 53.5 65 0.0022 32.2 10.2 133 13-167 9-171 (366)
116 1zxo_A Conserved hypothetical 52.3 67 0.0023 30.6 9.9 125 15-166 2-130 (291)
117 1nu0_A Hypothetical protein YQ 49.5 69 0.0023 27.3 8.3 86 14-123 4-96 (138)
118 1zkl_A HCP1, TM22, high-affini 49.3 16 0.00056 36.5 4.9 72 361-443 86-179 (353)
119 3v93_A Cyclic nucleotide speci 47.9 40 0.0014 33.6 7.4 43 361-413 102-144 (345)
120 4htl_A Beta-glucoside kinase; 46.2 2E+02 0.0068 27.3 12.4 127 15-168 6-148 (297)
121 2e5n_A RNA polymerase II elong 45.6 29 0.001 27.9 4.9 53 394-449 41-95 (100)
122 3o8m_A Hexokinase; rnaseh-like 45.3 1.6E+02 0.0054 30.6 11.9 60 14-78 81-140 (485)
123 1y2k_A DPDE3, PDE43, CAMP-spec 44.9 22 0.00077 35.4 5.1 42 361-413 99-140 (349)
124 3i8b_A Xylulose kinase; strain 44.3 52 0.0018 34.5 8.1 26 12-38 4-29 (515)
125 2paq_A 5'-deoxynucleotidase YF 43.9 21 0.00073 32.6 4.5 46 361-419 34-80 (201)
126 3bjc_A CGMP-specific 3',5'-cyc 42.8 44 0.0015 37.5 7.7 61 341-412 596-659 (878)
127 2our_A CAMP and CAMP-inhibited 40.2 2.7E+02 0.0093 27.2 12.2 40 361-413 83-122 (331)
128 2doa_A RNA polymerase II elong 38.9 25 0.00086 28.6 3.5 53 395-450 41-95 (104)
129 3itu_A CGMP-dependent 3',5'-cy 38.7 54 0.0019 32.6 6.8 42 361-413 85-126 (345)
130 3cet_A Conserved archaeal prot 37.8 25 0.00087 34.8 4.1 25 143-167 127-151 (334)
131 1miw_A TRNA CCA-adding enzyme; 36.2 24 0.00082 35.9 3.8 43 400-454 248-290 (404)
132 3mdq_A Exopolyphosphatase; str 34.2 1.1E+02 0.0039 29.6 8.3 59 13-74 131-190 (315)
133 2w6k_A COBE; biosynthetic prot 34.2 72 0.0025 27.4 6.0 59 60-127 22-80 (145)
134 3djc_A Type III pantothenate k 34.0 42 0.0014 32.1 4.9 30 145-174 4-33 (266)
135 2itm_A Xylulose kinase, xylulo 33.1 90 0.0031 32.2 7.8 70 15-95 2-74 (484)
136 1vfg_A A-adding enzyme, poly A 31.7 41 0.0014 33.9 4.7 43 399-453 256-298 (390)
137 2uyt_A Rhamnulokinase; rhamnos 30.9 33 0.0011 35.6 3.9 22 12-33 3-24 (489)
138 3dyn_A High affinity CGMP-spec 30.4 75 0.0026 31.3 6.2 42 361-413 78-119 (329)
139 3qi3_A High affinity CGMP-spec 27.7 99 0.0034 32.6 6.8 42 361-413 255-296 (533)
140 1t6c_A Exopolyphosphatase; alp 27.5 84 0.0029 30.6 6.0 58 12-74 137-197 (315)
141 1bdg_A Hexokinase; phosphotran 27.2 1.4E+02 0.0048 30.6 7.9 60 13-78 68-129 (451)
142 3eeq_A Putative cobalamin bios 26.0 99 0.0034 30.5 6.2 58 58-129 218-275 (336)
143 1iv0_A Hypothetical protein; r 26.0 1.3E+02 0.0044 23.9 5.8 83 15-123 3-93 (98)
144 4dzo_A Mitotic spindle assembl 25.9 55 0.0019 27.4 3.6 44 103-152 31-74 (123)
145 3sk3_A Acetate kinase, acetoki 25.6 45 0.0015 34.1 3.6 31 3-33 9-39 (415)
146 1ou5_A TRNA CCA-adding enzyme, 25.1 15 0.0005 38.1 -0.1 41 400-454 306-346 (448)
147 3ce9_A Glycerol dehydrogenase; 24.6 15 0.00052 36.5 -0.1 73 78-155 28-100 (354)
148 1u6z_A Exopolyphosphatase; alp 23.3 89 0.003 32.7 5.5 56 14-74 138-196 (513)
149 3ibj_A CGMP-dependent 3',5'-cy 22.8 1.4E+02 0.0048 32.2 7.3 58 345-413 428-487 (691)
150 1vlj_A NADH-dependent butanol 22.1 23 0.00078 36.0 0.6 73 78-155 37-113 (407)
151 3bex_A Type III pantothenate k 21.1 2.9E+02 0.01 25.6 8.3 134 11-172 1-150 (249)
152 3cer_A Possible exopolyphospha 20.6 1.3E+02 0.0046 29.5 6.0 61 13-75 146-212 (343)
153 2h3g_X Biosynthetic protein; p 20.4 1E+02 0.0035 29.3 4.9 28 145-172 2-29 (268)
154 3ecm_A High affinity CAMP-spec 20.4 67 0.0023 31.8 3.6 42 361-413 78-119 (338)
155 1xx7_A Oxetanocin-like protein 20.3 1.1E+02 0.0038 27.3 4.8 45 361-418 40-84 (184)
No 1
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=100.00 E-value=2.5e-102 Score=839.36 Aligned_cols=471 Identities=24% Similarity=0.387 Sum_probs=420.2
Q ss_pred CCcccccccCCCceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHH
Q 010059 1 MATNTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQ 80 (519)
Q Consensus 1 ~~~~~~~~~~~~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~ 80 (519)
|..+.|+| +++++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|+
T Consensus 1 ~~~~~~~~--~~~~~AaIDiGSNSirL~I~~~~-~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~ 77 (513)
T 1u6z_A 1 MPIHDKSP--RPQEFAAVDLGSNSFHMVIARVV-DGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQ 77 (513)
T ss_dssp -------------CEEEEEECSSCEEEEEEEEE-TTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTT
T ss_pred CCccccCc--cCCeEEEEEeccccEEEEEEEEc-CCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHH
Confidence 34334433 34569999999999999999997 5789999999999999999999999999999999999999999999
Q ss_pred HcCCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEe
Q 010059 81 SHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG 160 (519)
Q Consensus 81 ~~~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~ 160 (519)
+|+|+ +|++|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+ +++++||||||||++++
T Consensus 78 ~~~v~--~v~~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~-~~lviDIGGGStEl~~~ 154 (513)
T 1u6z_A 78 GFSPA--SVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKG-RKLVIDIGGGSTELVIG 154 (513)
T ss_dssp TCCGG--GEEEEECHHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCS-CEEEEEECSSCEEEEEE
T ss_pred hCCCC--EEEEEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCC-CEEEEEECCCcEEEEEE
Confidence 99995 7999999999999999999999999999999999999999999999999987543 68999999999999999
Q ss_pred eCCeEeeeeeeehhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCeEEEeehHHHHHHHHHHHc-CC
Q 010059 161 KRGKVVFCESVNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS-GY 238 (519)
Q Consensus 161 ~~~~~~~~~SlplG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~iG~gGt~~~l~~~~~~-~y 238 (519)
+++++...+|+|+|||+++++|+.++ ++..++.++++++++.+.+..+ .++..++..+||+|||+++++++... .|
T Consensus 155 ~~~~~~~~~Sl~lG~vrlte~f~~~~~~~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~lvg~gGt~~~la~i~~~~~~ 232 (513)
T 1u6z_A 155 ENFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTW--QFRIQGWNVAMGASGTIKAAHEVLMEMGE 232 (513)
T ss_dssp ETTEEEEEEEESCCHHHHHHHHSGGGBCCHHHHHHHHHHHHHHHTTTHH--HHHHHCCSEEEEESHHHHHHHHHHHHTTC
T ss_pred eCCeeeEEEEEeccHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHH--HhhhcCCCEEEEEChHHHHHHHHHHhCCC
Confidence 99999999999999999999998764 6888889999999999976532 23334666799999999999998643 45
Q ss_pred CCccccCCCCCCCCccccccCHHHHHHHHHHHHcCCCChHHHhhcCCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCc
Q 010059 239 DRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGY 318 (519)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~e~~~~~gl~~~Rad~i~~g~~il~~l~~~~~~~~i~vs~~ 318 (519)
+. + .++.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||+.
T Consensus 233 ~~--------------~-~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~ 295 (513)
T 1u6z_A 233 KD--------------G-IITPERLEKLVKEVLRHRNF--ASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDG 295 (513)
T ss_dssp SS--------------S-CBCHHHHHHHHHHHTTCSBG--GGCCCTTCCTTGGGTHHHHHHHHHHHHHHHTCSCBEECSC
T ss_pred CC--------------C-eecHHHHHHHHHHHHCCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 41 1 59999999999999999988 8999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhhcCCCCCcchhhHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcch
Q 010059 319 GLGEGVVADSLAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKD 398 (519)
Q Consensus 319 glreGll~~~l~~~~~~~~~~~~~~~~s~~~~~~ry~~~~~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~ 398 (519)
|||||++++++.+.. ..|++.+|+.++++||++|+ .|+++|+++|++|||+|++.|++. .++++
T Consensus 296 glreGll~~~~~~~~-----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~~l~~~~~l~---------~~~~~ 359 (513)
T 1u6z_A 296 ALREGVLYEMEGRFR-----HQDVRSRTASSLANQYHIDS--EQARRVLDTTMQMYEQWREQQPKL---------AHPQL 359 (513)
T ss_dssp CHHHHHHHHHHHHHT-----TCCHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHCGGG---------CCHHH
T ss_pred cHHHHHHHHHHHhcc-----cccHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHhhCcC---------CChhH
Confidence 999999999987632 23788899999999999986 999999999999999999998731 13456
Q ss_pred HHHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHH
Q 010059 399 LEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVL 478 (519)
Q Consensus 399 ~~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L 478 (519)
++||+|||+||||||+||+++||+||+|||+|++ ++||||+||.+||.+++||+++.|+..++.+..|++ +.+++|
T Consensus 360 ~~lL~~Aa~LhdiG~~I~~~~~~~Hs~yii~n~~-l~G~s~~e~~~lA~l~~~h~~~~~~~~~~~~~~l~~---~~v~~L 435 (513)
T 1u6z_A 360 EALLRWAAMLHEVGLNINHSGLHRHSAYILQNSD-LPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKK---KQFLPL 435 (513)
T ss_dssp HHHHHHHHHHTTTTTTTCSTTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCCTTCCCCSSCCH---HHHHHH
T ss_pred HHHHHHHHHHHHccCcCCccccchhHHHHHhcCC-CCCCCHHHHHHHHHHHHHhCCCCCcchhhhhhccCH---HHHHHH
Confidence 7999999999999999999999999999999998 999999999999999999999999866566688886 258999
Q ss_pred HHHHHhhHHhccccCCC-Ccc-eEEEEeCCEEEEEecCCC
Q 010059 479 CAIVRLSVILQQNDCVN-LRG-VDFFHSYEGFKLDGHPPF 516 (519)
Q Consensus 479 ~aiLRlA~~Ld~s~~~~-i~~-i~~~~~~~~~~l~~~~~~ 516 (519)
++|||||++||++|.+. +++ ++++.++++++|+++..|
T Consensus 436 ~~iLRlA~~Ld~~~~~~~i~~~~~~~~~~~~l~l~~~~~~ 475 (513)
T 1u6z_A 436 IQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDW 475 (513)
T ss_dssp HHHHHHHHHTTTTGGGCCCCSCCEEEEETTEEEEEECTTG
T ss_pred HHHHHHHHHhccccCCCCCCCeeEEEEECCEEEEEEcCcc
Confidence 99999999999999888 999 999999999999998775
No 2
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.5e-99 Score=816.21 Aligned_cols=460 Identities=20% Similarity=0.243 Sum_probs=407.8
Q ss_pred CceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE
Q 010059 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (519)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~ 91 (519)
.+++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+ +|++
T Consensus 14 ~~~~AaIDiGSNS~rL~I~~~~-~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~~~~~v~--~v~~ 90 (508)
T 3hi0_A 14 LAPVSVIDIGSNSVRLVVYEGL-SRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLSEQAQAQ--KLYV 90 (508)
T ss_dssp CCCEEEEEECSSEEEEEEESCS-SSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEEE
T ss_pred CCeEEEEEECCccEEEEEEEEc-CCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--eEEE
Confidence 4679999999999999999986 577899999999999999999999999999999999999999999999995 7999
Q ss_pred EEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeeeee
Q 010059 92 VATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESV 171 (519)
Q Consensus 92 vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~Sl 171 (519)
|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++. .+++|+||||||||+++++++++..++|+
T Consensus 91 vATsA~R~A~N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~--~~~lvvDIGGGStEl~~~~~~~~~~~~Sl 168 (508)
T 3hi0_A 91 LATAAAREAENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQ--PDGIAGDLGGGSLELIDIKDKSCGEGITL 168 (508)
T ss_dssp EECTHHHHSTTHHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSS--CEEEEEEECSSCEEEEEEETTEECCCEEE
T ss_pred EeeHHHHcCcCHHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCC--CCeEEEEeCCCceEEEEeeCCeeeeEEEe
Confidence 9999999999999999999999999999999999999999999998874 34799999999999999999999999999
Q ss_pred ehhHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHhcchhHHHHhcCCeEEEeehHHHHHHHHHHH--cCCCCccccCCCCC
Q 010059 172 NLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV--SGYDRDFVDNVGDF 249 (519)
Q Consensus 172 plG~vrl~e~f~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~iG~gGt~~~l~~~~~--~~y~~~~~~~~~~~ 249 (519)
|+||||+++.+.. ++..+++|+++.+..+ .+++...++..+||+|||+++++++.. .+||.+.+
T Consensus 169 ~lG~vrl~e~~~~------~~~~~~~~i~~~l~~~--~~~~~~~~~~~~ig~gGt~~~la~i~~~~~~y~~~~~------ 234 (508)
T 3hi0_A 169 PLGGLRLSEQSDG------SLEKAATIARKHVKSF--AKLLAAGEGRTFYAVGGTWRNIAKLHMEISGYPLHMM------ 234 (508)
T ss_dssp SCCHHHHHHHTTT------CHHHHHHHHHHHHHTT--HHHHHTTTTSEEEEESHHHHHHHHHHHHHHTCSCCCC------
T ss_pred cceEEehhhcChh------HHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEehHHHHHHHHHhhccCCCcccc------
Confidence 9999999998532 3667899999999862 233444456779999999999999763 46876544
Q ss_pred CCCccccccCHHHHHHHHHHHHcCCCChHHHhhcCCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHHH
Q 010059 250 GGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSL 329 (519)
Q Consensus 250 ~~~~~~~~i~~~~l~~l~~~l~~~~~~~~e~~~~~gl~~~Rad~i~~g~~il~~l~~~~~~~~i~vs~~glreGll~~~l 329 (519)
|+|.|+.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||++++++
T Consensus 235 ----~~~~i~~~~l~~~~~~l~~~~~~--~~~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~i~vs~~glREGll~~~l 308 (508)
T 3hi0_A 235 ----QGYELPLEEMLNFLEEVIVSRDS--KDPAWQAVSKNRRSLLPFGAIAMREVLRAMKPAKIAFSAQGVREGYLYSLL 308 (508)
T ss_dssp ----TTCEEEHHHHHHHHHHHHTCCC------CCHHHHHCTTCSHHHHHHHHHHHHHHHCCSEEEECSCCHHHHHHHTTS
T ss_pred ----cCcEEcHHHHHHHHHHHHcCCHH--HHHhccCCCHhHHHHHHHHHHHHHHHHHHcCcCEEEECCCcHHHHHHHHHh
Confidence 46899999999999999999998 899999999999999999999999999999999999999999999999998
Q ss_pred hhhcCCCCCcchhhHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhh
Q 010059 330 AKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLH 409 (519)
Q Consensus 330 ~~~~~~~~~~~~~~~~s~~~~~~ry~~~~~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~Lh 409 (519)
.+... ..|++.+|+++++.||++|. .||++|+++|+.||||++ +| +++++++||+|||+||
T Consensus 309 ~~~~~----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~ql~-~~------------~~~~~~~lL~~Aa~Lh 369 (508)
T 3hi0_A 309 TEAER----ESDPLLVAADELAILRARSP--EHARELADWSGRTFPVFG-ID------------ETEEESRYRQAACLLA 369 (508)
T ss_dssp CHHHH----HSCHHHHHHHHHHHHHCSCH--HHHHHHHHHHHHHGGGGT-CC------------CCHHHHHHHHHHHHHT
T ss_pred hhhcc----ccCHHHHHHHHHHHHhCcCH--HHHHHHHHHHHHHHHhhc-cC------------CChHHHHHHHHHHHHH
Confidence 75422 23778899999999999886 999999999999999997 43 2456899999999999
Q ss_pred hhccccCCCchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCC-CCCCc-chhhccCChHHHHHHHHHHHHHHhhHH
Q 010059 410 NIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKK-FPRSH-HAFLEEFPEQAKQKFRVLCAIVRLSVI 487 (519)
Q Consensus 410 diG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~-~~~~~-~~~~~~L~~~~~~~v~~L~aiLRlA~~ 487 (519)
||||+||+++||+||+|||+|++ ++||||+||.+||.+++|+++. .|+.. ++++..|+++++..+++|++|||||++
T Consensus 370 diG~~i~~~~~~~Hs~yii~n~~-l~Gfs~~e~~~lA~~~~~r~~~~~~~~~~~~~~~ll~~~~~~~~~~L~~iLRlA~~ 448 (508)
T 3hi0_A 370 DISWRAHPDYRGLQALNIIAHSS-FVAITHPGRAYIALANYYRFEGLNDNGTTEPLAAMAGERLQELGKLLGGLLRVVYL 448 (508)
T ss_dssp TTTTTSCGGGHHHHHHHHHHHBC-CCSCCHHHHHHHHHHHHHHHHCSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHhCCCchHHHHHHHHHcCC-CCCCCHHHHHHHHHHHHHhcCCCCccchhhHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999999877544432 33332 345566889999999999999999999
Q ss_pred hccccCCCCcceEEEEeCC---EEEEEecCCC
Q 010059 488 LQQNDCVNLRGVDFFHSYE---GFKLDGHPPF 516 (519)
Q Consensus 488 Ld~s~~~~i~~i~~~~~~~---~~~l~~~~~~ 516 (519)
||+++.+.+++++++.+++ .++|+++.+|
T Consensus 449 L~~~~~~~i~~~~~~~~~~~~~~l~l~~~~~~ 480 (508)
T 3hi0_A 449 FSASMPGVVDHLKFRKSDNPDIDLEFVVPHDY 480 (508)
T ss_dssp HHTTCSSSGGGCEEEECSSTTCSEEEEECGGG
T ss_pred hcCCCcCCCCceEEEECCCCceEEEEEECCCc
Confidence 9999999999999999888 8999998776
No 3
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=100.00 E-value=8.3e-70 Score=552.08 Aligned_cols=303 Identities=26% Similarity=0.461 Sum_probs=280.0
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~v 92 (519)
+++|+|||||||+||+|+++.+ +.++++++.+++||||++++.+|.|++++|+|++++|++|+++|++|+|+ ++++|
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~-~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~v~~v 80 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVN-DRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVILDEHAVV--HVIAT 80 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEET-TEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHHHHTTCC--EEEEE
T ss_pred ceEEEEEecCCcEEEEEEEEcC-CceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHHHHcCCC--EEEEE
Confidence 3699999999999999999985 88999999999999999999999999999999999999999999999995 79999
Q ss_pred EehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeeeeee
Q 010059 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (519)
Q Consensus 93 ATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~Slp 172 (519)
||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+++++++||||||||+++++++++.+++|+|
T Consensus 81 ATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Sl~ 160 (315)
T 3mdq_A 81 GTSAVRSGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILWKQSFE 160 (315)
T ss_dssp ECHHHHHCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEEEEEES
T ss_pred eeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEeeeEEEe
Confidence 99999999999999999999999999999999999999999999988655679999999999999999999999999999
Q ss_pred hhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCeEEEeehHHHHHHHHHHH----cCCCCccccCCC
Q 010059 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV----SGYDRDFVDNVG 247 (519)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~iG~gGt~~~l~~~~~----~~y~~~~~~~~~ 247 (519)
+|+|||+++|..++ ++.++++.+++|+++.+... .++++..++..+||+|||+++++++.. ..|+.+.+
T Consensus 161 lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~~~~~~lig~gGt~~~la~~~~~~~~~~y~~~~~---- 234 (315)
T 3mdq_A 161 IGGQRLIDRFHVHDPMREDDRVMMHNYFDEVLVPL--EKAINTWRPTQLIGCSGTFDTLAEMNIQHHREKIALEKQ---- 234 (315)
T ss_dssp CCHHHHHHHSCCCSSCCHHHHHHHHHHHHHHTHHH--HHHHHHHCCCEEEEESHHHHHHHHHHHHHHTCCCCGGGC----
T ss_pred chhhHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEchHHHHHHHHHHhcccCCCCcccc----
Confidence 99999999998765 68888999999999999864 234444567789999999999999763 45776544
Q ss_pred CCCCCccccccCHHHHHHHHHHHHcCCCChHHHhhcCCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHH
Q 010059 248 DFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVAD 327 (519)
Q Consensus 248 ~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~e~~~~~gl~~~Rad~i~~g~~il~~l~~~~~~~~i~vs~~glreGll~~ 327 (519)
|++.++.+++.+++++|..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||++++
T Consensus 235 ------~~~~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreG~l~~ 306 (315)
T 3mdq_A 235 ------TSYLLSLPDFNRLRKQLVASTRR--ERLAIAGMIELRADMVVVAICLIEHVLKLVSTNAITVSTYSLKEGVLYT 306 (315)
T ss_dssp ------SEEEEEHHHHHHHHHHHHHCCHH--HHHTSTTCCHHHHHHHHHHHHHHHHHHHHSCCSEEEEESCCHHHHHHHH
T ss_pred ------cCcEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCccHHHHHHHH
Confidence 46899999999999999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHhhh
Q 010059 328 SLAKV 332 (519)
Q Consensus 328 ~l~~~ 332 (519)
++.+.
T Consensus 307 ~~~~~ 311 (315)
T 3mdq_A 307 MLDGV 311 (315)
T ss_dssp HHHTC
T ss_pred Hhhhh
Confidence 98764
No 4
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=100.00 E-value=9.5e-68 Score=542.03 Aligned_cols=312 Identities=27% Similarity=0.365 Sum_probs=275.4
Q ss_pred ccccccCCCceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 010059 4 NTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHN 83 (519)
Q Consensus 4 ~~~~~~~~~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~ 83 (519)
|.+-|...++++|+|||||||+||+|+++.+++.++++++.+++||||+|++.+|.|++++|+|++++|++|+++|++|+
T Consensus 7 ~~~~~~~~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~~~~~ 86 (343)
T 3cer_A 7 HHSHMSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHP 86 (343)
T ss_dssp -------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred cccccCCCCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34556767778999999999999999999866779999999999999999999999999999999999999999999999
Q ss_pred CCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCC--CCCceEEEEECCCceEEEEee
Q 010059 84 ISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGK 161 (519)
Q Consensus 84 v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~--~~~~~lv~DIGGGStEl~~~~ 161 (519)
++ +|++|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++. .+++++++||||||||+++++
T Consensus 87 v~--~v~~vATsA~R~A~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~ 164 (343)
T 3cer_A 87 ID--GLRFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGG 164 (343)
T ss_dssp CS--EEEEEECHHHHHCTTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECC
T ss_pred CC--eEEEEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEee
Confidence 95 79999999999999999999999999999999999999999999999998875 445699999999999999998
Q ss_pred C------CeEeeeeeeehhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCeEEEeehHHHHHHHHHH
Q 010059 162 R------GKVVFCESVNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAV 234 (519)
Q Consensus 162 ~------~~~~~~~SlplG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~iG~gGt~~~l~~~~ 234 (519)
+ +++.++.|+|+|+++++++|..++ ++..+++.+++|+++.+.+... .++..++..+||+|||+++++++.
T Consensus 165 ~~~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~lvg~gGt~~~la~l~ 242 (343)
T 3cer_A 165 DGVSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEHIDEAFR--TVDAGKARTIIGVSGTVTTMTALA 242 (343)
T ss_dssp CSSSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHHHHHHHHT--TSCGGGCSEEEEESHHHHHHHHHH
T ss_pred cCccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH--hhhhcCCcEEEEEchHHHHHHHHH
Confidence 8 555699999999999999998764 6788899999999999976421 111223457999999999999986
Q ss_pred Hc--CCCCccccCCCCCCCCccccccCHHHHHHHHHHHHcCCCChHHHhhcCCCCccchhhHHHHHHHHHHHHHHh----
Q 010059 235 VS--GYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELL---- 308 (519)
Q Consensus 235 ~~--~y~~~~~~~~~~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~e~~~~~gl~~~Rad~i~~g~~il~~l~~~~---- 308 (519)
.. .|+.+.+ |+|.++.+++.+++++|..++.+ ++.+++||+++|+|+|+||++|+.++|+.+
T Consensus 243 ~~~~~y~~~~v----------hg~~l~~~~l~~~~~~l~~~~~~--er~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~ 310 (343)
T 3cer_A 243 MGLKEYDHTVV----------DGHRLSFEDAYAVDDKFLRMTRA--ERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAA 310 (343)
T ss_dssp TTCSSCCHHHH----------TTCEEEHHHHHHHHHHHHSSCHH--HHHTCTTSCTTTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCcccc----------CCeEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 43 4654433 46899999999999999999988 999999999999999999999999999999
Q ss_pred ------CCCeEEECCcchHHHHHHHHHhh
Q 010059 309 ------GIEEMEVSGYGLGEGVVADSLAK 331 (519)
Q Consensus 309 ------~~~~i~vs~~glreGll~~~l~~ 331 (519)
++++|+||+.|||||++++++.+
T Consensus 311 ~~~~~~~~~~i~vs~~glreGll~~~~~~ 339 (343)
T 3cer_A 311 KADHGEAIDSFVASEHGLLDGIVLDYGRR 339 (343)
T ss_dssp HHHHSCCCCEEEEESCSHHHHHHHHHHHH
T ss_pred cccccCCCCEEEECCCcHHHHHHHHHHHH
Confidence 99999999999999999998854
No 5
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=100.00 E-value=3.3e-66 Score=525.03 Aligned_cols=296 Identities=31% Similarity=0.425 Sum_probs=271.9
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~v 92 (519)
.++|+|||||||+||+|++++ ++.++++++.+++||||++++.+|.|++++|++++++|++|++++++|+++ ++++|
T Consensus 12 m~~a~IDiGSns~rl~I~~~~-~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~i~~v 88 (315)
T 1t6c_A 12 MRVASIDIGSYSVRLTIAQIK-DGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVE--RVKAV 88 (315)
T ss_dssp EEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEEEE
T ss_pred cEEEEEEECcCcEEEEEEEEc-CCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCC--eEEEE
Confidence 479999999999999999997 678999999999999999999999999999999999999999999999995 79999
Q ss_pred EehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeeeeee
Q 010059 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (519)
Q Consensus 93 ATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~Slp 172 (519)
||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++ ..++++++||||||||+++++++++.+++|+|
T Consensus 89 ATsA~R~A~N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~-~~~~~lvvDIGGGStEl~~~~~~~~~~~~Sl~ 167 (315)
T 1t6c_A 89 ATEAIRRAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK-PEGEVCVVDQGGGSTEYVFGKGYKVREVISLP 167 (315)
T ss_dssp ECHHHHTSTTHHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC-CCSEEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred EcHHHHcCcCHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc-cCCCEEEEEeCCCcEEEEEEeCCceeeEEEEe
Confidence 99999999999999999999999999999999999999999999887 44568999999999999999999999999999
Q ss_pred hhHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHhcchhHHHHhcCCeEEEeehHHHHHHHHHHHc--CCCCccccCCCCC
Q 010059 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS--GYDRDFVDNVGDF 249 (519)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~iG~gGt~~~l~~~~~~--~y~~~~~~~~~~~ 249 (519)
+|+++++++|..++ |++++++.+++|+++.+.+. . +.. ..+||+|||+++++++... .|+.+.+
T Consensus 168 ~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~~l~~~--~---~~~--~~lig~gGt~~~la~~~~~~~~y~~~~v------ 234 (315)
T 1t6c_A 168 IGIVNLTETFFKQDPPTEEEVKRFFEFLEKELSKV--K---KPV--DTIVGLGGTITTLAALEYNVYPYDPQKV------ 234 (315)
T ss_dssp CCHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHTTT--C---CCC--SEEEEESHHHHHHHHHHTTCCSCCHHHH------
T ss_pred ccHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--H---hhc--CEEEEECcHHHHHHHHHhhccCCCcccc------
Confidence 99999999998754 68888999999999999753 1 111 4689999999999998643 5664433
Q ss_pred CCCccccccCHHHHHHHHHHHHcCCCChHHH-hhcCCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHH
Q 010059 250 GGCKRDWRLSRGELKGIVERLCCGGDGEVER-VRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (519)
Q Consensus 250 ~~~~~~~~i~~~~l~~l~~~l~~~~~~~~e~-~~~~gl~~~Rad~i~~g~~il~~l~~~~~~~~i~vs~~glreGll~~~ 328 (519)
|+|.++.+++++++++|..++.+ ++ .+++||+++|+|+|+||++|+.++|+.+++++|+||++|||||+++++
T Consensus 235 ----~g~~l~~~~l~~~~~~l~~~~~~--er~~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 308 (315)
T 1t6c_A 235 ----HGKVLTYGQIKKWFDTFKEIPSE--ERSKRFRQVEDRRAKVILAGIGIFLKTLEIFEKDCLIVSDWGLREGVLVSE 308 (315)
T ss_dssp ----TTCEEEHHHHHHHHHHHTTSCHH--HHHHHSTTSCGGGTTTHHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHH
T ss_pred ----CCeEEcHHHHHHHHHHHHcCCHH--HHHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCCchHHHHHHHH
Confidence 46899999999999999999988 99 999999999999999999999999999999999999999999999998
Q ss_pred Hhh
Q 010059 329 LAK 331 (519)
Q Consensus 329 l~~ 331 (519)
+.+
T Consensus 309 ~~~ 311 (315)
T 1t6c_A 309 VLK 311 (315)
T ss_dssp HHH
T ss_pred Hhh
Confidence 854
No 6
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis}
Probab=100.00 E-value=6.3e-37 Score=292.67 Aligned_cols=160 Identities=20% Similarity=0.308 Sum_probs=146.7
Q ss_pred chhhHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchH--HHHHHHHHhhhhccccCC
Q 010059 340 ANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDL--EYLEAACLLHNIGHFTSK 417 (519)
Q Consensus 340 ~~~~~~s~~~~~~ry~~~~~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~--~lL~~Aa~LhdiG~~I~~ 417 (519)
.|++.+|+.+++.||++|. .||++|+++|..|||++++.|++ +++++ +||+|||+|||||++||+
T Consensus 3 ~Dir~~sv~~l~~ry~vd~--~ha~~V~~~A~~Lf~~l~~~~~l-----------~~~~~~~~lL~~Aa~LHdIG~~I~~ 69 (209)
T 3rf0_A 3 QDIRQRTAKSLADHYNIDR--EQARRVLETTEQLYTQWLAQNTK-----------LVQPQLEALLKWAAMLHEVGLSINH 69 (209)
T ss_dssp HHHHHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHHHHHHCGG-----------GCCHHHHHHHHHHHHHTTGGGGTCS
T ss_pred CCHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHHhCC-----------ChhHHHHHHHHHHHHHHHcccccCc
Confidence 4889999999999999986 89999999999999999999884 45678 999999999999999999
Q ss_pred CchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhccccCCC-C
Q 010059 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDCVN-L 496 (519)
Q Consensus 418 ~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld~s~~~~-i 496 (519)
++||+||+|||.|++ ++||||+||.+||.+++|||++.|+.. +..+++.++..+.+|+++||||++||+++.+. +
T Consensus 70 ~~~hkHs~Yii~n~~-l~Gfs~~e~~~lA~lv~~hr~~~~~~~---~~~l~~~~~~~~~~L~~iLRLA~~L~~~r~~~~l 145 (209)
T 3rf0_A 70 SGMHRHSAYILQNTN-LPGFNQEQQTLLATLVRMHRKAIKLDE---LPRLNLFKKKYYLPLIQLLRLSTLLNNQRQSTTT 145 (209)
T ss_dssp TTHHHHHHHHHHHSC-CTTCCHHHHHHHHHHHHTSSSCCCGGG---CCCCSSCCHHHHHHHHHHHHHHHHHTTTGGGCCC
T ss_pred ccchHHHHHHHhCCC-CCCCCHHHHHHHHHHHHHhcCCCChhh---hhhcCHHHHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 999999999999998 999999999999999999999987642 33467788899999999999999999999987 4
Q ss_pred c-ceEEEEeCCEEEEEecCCC
Q 010059 497 R-GVDFFHSYEGFKLDGHPPF 516 (519)
Q Consensus 497 ~-~i~~~~~~~~~~l~~~~~~ 516 (519)
+ +++++.+++.++|+++.+|
T Consensus 146 ~~~~~l~~~~~~l~L~~~~~w 166 (209)
T 3rf0_A 146 PESLRLITDDSHWTLRFPHGY 166 (209)
T ss_dssp CSCCEEEEETTEEEEEECTTH
T ss_pred CCceEEEEcCCEEEEEeCccc
Confidence 7 8999999999999998775
No 7
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=99.96 E-value=8.4e-30 Score=261.44 Aligned_cols=154 Identities=18% Similarity=0.150 Sum_probs=130.3
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEe-----eeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDT-----LKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD 87 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~-----~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~ 87 (519)
+++||||+||||+||.|+++.+++.++++++ .+..++|+++... +++++++++ +|++ ++.++++
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~-----~~~~~~~l~---~f~~-~~~~~~~-- 71 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPN-----SVTIDAYLT---MLLA-DAPIHNI-- 71 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCS-----HHHHHHHHH---HHHT-TCSCCSE--
T ss_pred CEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCC-----HHHHHHHHH---HHHH-HHhcCCC--
Confidence 4689999999999999999986555777776 6667788877653 899998876 8888 7878875
Q ss_pred cEEEEEehhhhhcCC--hHHHHHHHHHHh-------CCceEeeChHHHHHHHHhhhhccCCC----CCCceEEEEECCCc
Q 010059 88 HTRAVATAAVRAAEN--KDEFVECVREKV-------GFEVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGGGS 154 (519)
Q Consensus 88 ~i~~vATsA~R~A~N--~~~f~~~i~~~t-------G~~i~iIsg~eEA~l~~~gv~~~~~~----~~~~~lv~DIGGGS 154 (519)
.|+++||+|+|+|+| +++|+++|++++ |+.|+||||+|||+|+|+||...++. ..+..+++||||||
T Consensus 72 ~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGS 151 (353)
T 3aap_A 72 PVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLVEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGAS 151 (353)
T ss_dssp EEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEEEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSE
T ss_pred cEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCCeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCc
Confidence 699999999999999 999999999999 99999999999999999999987752 22358999999999
Q ss_pred eEEEEeeC--CeEeee--eeeehhHHH
Q 010059 155 TEFVIGKR--GKVVFC--ESVNLGHVS 177 (519)
Q Consensus 155 tEl~~~~~--~~~~~~--~SlplG~vr 177 (519)
|||+++.+ +++... .|+|+|++.
T Consensus 152 tei~~~~~~~~~~~~~~~~sl~lG~~~ 178 (353)
T 3aap_A 152 VQIVFPMPKNAEISKHNQVELNIYGQN 178 (353)
T ss_dssp EEEEEECCCCTTSCGGGEEEEEETTEE
T ss_pred eEEEEecCCccccCCCceEEEEECCcc
Confidence 99999854 455544 899999854
No 8
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=99.92 E-value=5.6e-25 Score=232.16 Aligned_cols=149 Identities=18% Similarity=0.187 Sum_probs=122.4
Q ss_pred ceEEEEEecccceeeeEEEEeCCC-CEEEEEeeeeeeec-cCCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHcCCCCc
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~-~~~~i~~~k~~vrL-g~~~~~~g~ls~e~i~~~~~~L~~f~~~~---~~~~v~~~ 87 (519)
+..+|||+||||+||.||++..+. ....+.+....+++ +.|+...+ ..++++.+.+.+|.+|+... +.++++
T Consensus 34 ~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~~~~~~~~Gls~~~-~~pe~~~~~l~~Ll~~a~~~iP~~~~~~t-- 110 (456)
T 3cj1_A 34 KYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYA-NDPSKAGQSLVRCLEQALRDVPRDRHAST-- 110 (456)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEEEEECSSSCGGGGT-TSTHHHHHHTHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeeeeeeeccccccccc-CCHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 456799999999999999997431 22223334455677 88887766 67999999999999998754 888886
Q ss_pred cEEEEEehhhhhcC-----ChHHHHHHHHHHhC------CceEeeChHHHHHHHHhhhhccCCCC-------------CC
Q 010059 88 HTRAVATAAVRAAE-----NKDEFVECVREKVG------FEVDVLTGEQEAKFVYMGVLQFLPVF-------------DR 143 (519)
Q Consensus 88 ~i~~vATsA~R~A~-----N~~~f~~~i~~~tG------~~i~iIsg~eEA~l~~~gv~~~~~~~-------------~~ 143 (519)
.|+++||||+|+|+ |+++|+++|++.+| ..|+||||+|||+|+|+||...+... .+
T Consensus 111 ~v~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~ 190 (456)
T 3cj1_A 111 PLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKG 190 (456)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCC
T ss_pred eEEEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCC
Confidence 59999999999998 79999999999995 68999999999999999998776521 34
Q ss_pred ceEEEEECCCceEEEEeeCCe
Q 010059 144 LVLSVDIGGGSTEFVIGKRGK 164 (519)
Q Consensus 144 ~~lv~DIGGGStEl~~~~~~~ 164 (519)
..+++|||||||||++..+++
T Consensus 191 t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 191 TLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCEEEEECSSEEEEEEECCSC
T ss_pred ceEEEEcCCCceEEEeccCCc
Confidence 579999999999999987765
No 9
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=99.83 E-value=1.6e-20 Score=196.74 Aligned_cols=148 Identities=18% Similarity=0.223 Sum_probs=118.6
Q ss_pred eEE-EEEecccceeeeEEEEeCCC-CEEEEEeeeeeeec-cCCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHcCCCCc
Q 010059 14 LFA-SIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (519)
Q Consensus 14 ~~A-vIDIGSNsirL~I~~~~~~~-~~~~i~~~k~~vrL-g~~~~~~g~ls~e~i~~~~~~L~~f~~~~---~~~~v~~~ 87 (519)
.|| |||+|||++|+.||+...+. ....+.+.....++ |.|+...+. .++++.+.++.|.+|.... +.++.+
T Consensus 34 ~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~~~~k~~gpGlSs~~~-~p~~~~~~l~~Ll~~a~~~vp~~~~~~t-- 110 (452)
T 3zx3_A 34 KYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQLEECQVKGPGISKYAQ-KTDEIAAYLAECMKMSTERIPASKQHQT-- 110 (452)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEEEEEECSSSCGGGGTT-CGGGHHHHHHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCcEEEEEEEeCCcCCCccccceeeeecccCCChhccCC-CHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 455 89999999999999997421 12223334556677 788877776 8888999999999998864 777876
Q ss_pred cEEEEEehhhhhcC-----ChHHHHHHHHHHhC---C---ceEeeChHHHHHHHHhhhhccCCC----CCCceEEEEECC
Q 010059 88 HTRAVATAAVRAAE-----NKDEFVECVREKVG---F---EVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGG 152 (519)
Q Consensus 88 ~i~~vATsA~R~A~-----N~~~f~~~i~~~tG---~---~i~iIsg~eEA~l~~~gv~~~~~~----~~~~~lv~DIGG 152 (519)
.|.++||++||.++ |+++|+++|++.++ + .|+||||+|||.|+|+||...+.. ..+...++||||
T Consensus 111 pi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGG 190 (452)
T 3zx3_A 111 PVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGG 190 (452)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECS
T ss_pred cEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCC
Confidence 59999999999997 57999999999984 4 899999999999999999765542 124578999999
Q ss_pred CceEEEEeeCCe
Q 010059 153 GSTEFVIGKRGK 164 (519)
Q Consensus 153 GStEl~~~~~~~ 164 (519)
|||||++..++.
T Consensus 191 gStQi~f~~~~~ 202 (452)
T 3zx3_A 191 ASTQITFVPLNS 202 (452)
T ss_dssp SEEEEEECCSSC
T ss_pred CceEEEeccCCC
Confidence 999999886653
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.73 E-value=3e-17 Score=162.32 Aligned_cols=153 Identities=18% Similarity=0.221 Sum_probs=116.6
Q ss_pred CCceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCCccE
Q 010059 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHT 89 (519)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~-~v~~~~i 89 (519)
+++++++|||||||+|++|+ +.++ .++.....+.+ ...+|.+.+ ++++.++|+.|.+.+..+ +.+ ..
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~--~~~~--~~l~~~~~~~~----~l~~g~i~d--~~~~~~~l~~~~~~~~~~~~~~--~~ 93 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVT--DQEG--IPVAGALKWAS----VVKDGLVVD--YIGAIQIVRELKAKVERLLGSE--LF 93 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEE--CTTC--CEEEEEEEECC----CCBTTBCTT--HHHHHHHHHHHHHHHHHHSSSC--CC
T ss_pred CCCEEEEEEcccceEEEEEE--CCCC--cEEEEEeeccc----ccCCCEEEc--HHHHHHHHHHHHHHHHHhcCCc--cC
Confidence 34579999999999999995 3333 34444444332 122344433 466678888887777665 554 34
Q ss_pred EEEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeee
Q 010059 90 RAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCE 169 (519)
Q Consensus 90 ~~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~ 169 (519)
.+++|...+.+.|+++++.++.+.+|+++..++++.||...+.|.. .++|+|||||||+++++.+|.+.+..
T Consensus 94 ~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~--------~~~viDiGggst~~~~~~~g~~~~~~ 165 (272)
T 3h1q_A 94 QAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN--------DGIVVDIGGGTTGIAVIEKGKITATF 165 (272)
T ss_dssp EEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS--------SEEEEEECSSCEEEEEEETTEEEEEC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC--------CEEEEEECCCcEEEEEEECCEEEEEe
Confidence 6688888888999999999999999999999999999998877642 26999999999999999999999999
Q ss_pred eeehhHHHHHHhhc
Q 010059 170 SVNLGHVSLSEKFG 183 (519)
Q Consensus 170 SlplG~vrl~e~f~ 183 (519)
++|+|..++++.+.
T Consensus 166 ~~~~Gg~~~~~~l~ 179 (272)
T 3h1q_A 166 DEPTGGTHLSLVLA 179 (272)
T ss_dssp CBSCCHHHHHHHHH
T ss_pred cCCCcHHHHHHHHH
Confidence 99999999999653
No 11
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=98.37 E-value=1.5e-06 Score=91.03 Aligned_cols=74 Identities=22% Similarity=0.329 Sum_probs=58.0
Q ss_pred cEEEEEehhhhhcC--ChHHHHHHHHHHhC-------C-------ceEeeChHHHHHHHHhhhhccCCC-----------
Q 010059 88 HTRAVATAAVRAAE--NKDEFVECVREKVG-------F-------EVDVLTGEQEAKFVYMGVLQFLPV----------- 140 (519)
Q Consensus 88 ~i~~vATsA~R~A~--N~~~f~~~i~~~tG-------~-------~i~iIsg~eEA~l~~~gv~~~~~~----------- 140 (519)
-|...||+.||.-. -++.+++.++..+- + .++||||+||+.|.|.++..-+..
T Consensus 158 PV~L~ATAGMRLLp~~kqd~IL~aVr~~L~~sp~~~gF~F~~~~~~vrIIsG~EEGvYgWITvNYLLG~f~~~~~~~~~~ 237 (611)
T 4a57_A 158 PVMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGYKFFTNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARCMID 237 (611)
T ss_dssp EEEEEECTTSTTCCTTHHHHHHHHHHHHHTSCCGGGCCCEECCTTTSEECCHHHHHHHHHHHHHHHTTCCSSSCSEEEEC
T ss_pred cEEEEeeeecccCCHHHHHHHHHHHHHHHhcCCcccCcccccCCCceeecCCccceeeEeeehhhhhccccccccccccc
Confidence 48889999999874 46788888877653 1 289999999999999999754321
Q ss_pred -------CCCceEEEEECCCceEEEEee
Q 010059 141 -------FDRLVLSVDIGGGSTEFVIGK 161 (519)
Q Consensus 141 -------~~~~~lv~DIGGGStEl~~~~ 161 (519)
.....-++|+|||||+|++.-
T Consensus 238 ~~~~~~~~~~TvG~LDLGGASTQIaF~p 265 (611)
T 4a57_A 238 EYGVKQCRNDLAGVVEVGGASAQIVFPL 265 (611)
T ss_dssp TTSCEEEECCCCEEEEECSSCEEEEEEC
T ss_pred cccccCCCCceeEEEeeCCceEEEEecc
Confidence 123478999999999999853
No 12
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.24 E-value=1.6e-05 Score=81.61 Aligned_cols=71 Identities=23% Similarity=0.206 Sum_probs=54.4
Q ss_pred HHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeeeeeehhHHHHHHhhc
Q 010059 112 EKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFG 183 (519)
Q Consensus 112 ~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f~ 183 (519)
+..|+++..|.-+--|-...+|..... ..+...+++|||||+|.++++++|.+.+..++|+|.-.+++...
T Consensus 161 ~~aGl~~~~i~~ep~Aaa~~~~~~~~~-~~~~~~~vvDiGggttdi~i~~~g~~~~~~~~~~GG~~i~~~i~ 231 (377)
T 2ych_A 161 RGAGLVPVVLDVKPFAGLYPLEARLAE-EPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIA 231 (377)
T ss_dssp HHTTCEEEEEEEHHHHTTGGGHHHHHT-STTCEEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHH
T ss_pred HHCCCceEEEecchHHHHHHHHhhccc-ccCCeEEEEEECCCcEEEEEEECCEEEEEEeeechHHHHHHHHH
Confidence 456888887777777765555543211 12334799999999999999999999999999999999988653
No 13
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.18 E-value=8.7e-06 Score=85.15 Aligned_cols=39 Identities=21% Similarity=0.203 Sum_probs=36.6
Q ss_pred ceEEEEECCCceEEEEeeCCeEeeeeeeehhHHHHHHhh
Q 010059 144 LVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (519)
Q Consensus 144 ~~lv~DIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (519)
..+++|||||+|.++++.+|.+.+..++|+|.-.+++..
T Consensus 207 gv~vvDiGggttdisi~~~g~~~~~~~i~~GG~~it~dI 245 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDV 245 (419)
T ss_dssp CEEEEEECSSSEEEEEEETTEEEEEEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEECCEEEEEEecccHHHHHHHHH
Confidence 589999999999999999999999999999999998864
No 14
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=97.76 E-value=0.00014 Score=69.07 Aligned_cols=99 Identities=15% Similarity=0.067 Sum_probs=69.8
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccC---CCchhhhhHHHHHc-CCCC
Q 010059 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS---KKGYHKQSCHIIMN-GDHL 434 (519)
Q Consensus 359 ~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~---~~~h~~Hs~yiI~n-s~~l 434 (519)
+..|+.+|+.+|..|..... .+..++.+||+|||||+..+ ...|...++.++.. -. -
T Consensus 34 ~~~H~~rV~~~a~~la~~~~------------------~d~~~l~~AaLLHDIg~~~~~~~~~~H~~~ga~~a~~~L~-~ 94 (220)
T 2pq7_A 34 DISHTFRVMENASEIASREK------------------CDLQKAIIAALLHDIKRPHEALTGVDHAESGAEYASGLLP-T 94 (220)
T ss_dssp SHHHHHHHHHHHHHHHHHHT------------------CCHHHHHHHHHHTTTTHHHHHHHCCCHHHHHHHHHHHHGG-G
T ss_pred hHHHHHHHHHHHHHHHHHcC------------------CCHHHHHHHHHHHcCCCcccCCCcCCHHHHHHHHHHHHHH-H
Confidence 44899999999998876431 13578999999999998654 34566678887654 22 3
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhcc
Q 010059 435 YGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490 (519)
Q Consensus 435 ~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld~ 490 (519)
.||+..+...++.++++|...... ... ...+.|++.||.||.
T Consensus 95 ~~~~~~~i~~v~~~I~~H~~~~~~------~~~--------~~~a~Iv~dAD~Lda 136 (220)
T 2pq7_A 95 MGFDISFVAEVSKAIRSHRYSGGL------TPT--------SLTGKILQDADRLDA 136 (220)
T ss_dssp GTCCHHHHHHHHHHHHHCC-----------CCC--------SHHHHHHHHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHHcCcccCC------CCC--------CHHHHHHHHhhHHhh
Confidence 689999999999999999853211 111 236778888888874
No 15
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=97.31 E-value=0.0023 Score=66.23 Aligned_cols=77 Identities=13% Similarity=0.268 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCCce-EeeChHHHHHHHHhhhhc-cCCCCCCceEEEEECCCceEEEEe--eCCeEe---eeeeeehhHH
Q 010059 104 DEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQ-FLPVFDRLVLSVDIGGGSTEFVIG--KRGKVV---FCESVNLGHV 176 (519)
Q Consensus 104 ~~f~~~i~~~tG~~i-~iIsg~eEA~l~~~gv~~-~~~~~~~~~lv~DIGGGStEl~~~--~~~~~~---~~~SlplG~v 176 (519)
...+..+-+..|+++ .+++..+-|-+.| +... ... .+...+|+|+|||+|.++++ .++.+. .....++|..
T Consensus 166 r~~~~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~-~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~ 243 (409)
T 4gni_A 166 KAALIAAAAAADLEVLQLISEPAAAVLAY-DARPEATI-SDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGI 243 (409)
T ss_dssp HHHHHHHHHHTTCEEEEEEEHHHHHHHHT-TC-------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHH
T ss_pred HHHHHHHHHHcCCCeEEEEcCHHHHHHHH-hcccccCC-CCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHH
Confidence 344555556679986 5666555555544 4332 122 24568999999999999985 455333 2235899998
Q ss_pred HHHHhh
Q 010059 177 SLSEKF 182 (519)
Q Consensus 177 rl~e~f 182 (519)
.+.+.+
T Consensus 244 ~~d~~i 249 (409)
T 4gni_A 244 ALDKVL 249 (409)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877754
No 16
>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A
Probab=97.27 E-value=0.00085 Score=67.65 Aligned_cols=102 Identities=15% Similarity=0.241 Sum_probs=68.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHH-HHHHHHhhhhccccCC------------------Cchh
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEY-LEAACLLHNIGHFTSK------------------KGYH 421 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~l-L~~Aa~LhdiG~~I~~------------------~~h~ 421 (519)
.|+.+|+.+|..|-..+ + +++.+... |.+||+|||||+..-+ ..|.
T Consensus 169 ~Hs~~Va~la~~la~~l----g-----------l~~~~~~~~l~~aaLLHDIGk~~ip~~il~k~~~L~~~E~~~~~~H~ 233 (328)
T 3tm8_A 169 HHGVTVSTLSIALAQKL----G-----------ITDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDSMSPEDLALWKKHP 233 (328)
T ss_dssp HHHHHHHHHHHHHHHHH----T-----------CCCHHHHHHHHHHHHHTTGGGTTCSCCCSSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc----C-----------cCHHHHHHHHHHHHHHhcCCcccCCHHHHhCCCCCCHHHHHHHHHHH
Confidence 79999999999776654 3 45556667 9999999999988433 2488
Q ss_pred hhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhcc
Q 010059 422 KQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490 (519)
Q Consensus 422 ~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld~ 490 (519)
..++.+++.. .|++ ..++.+++||.......- ...|..++ +-.++.|+.+|+.+|.
T Consensus 234 ~~G~~~ll~~---~~~~----~~v~~~i~~HHEr~dGsG---P~gl~g~~---I~~~arIv~vaD~~da 289 (328)
T 3tm8_A 234 IEGAQKVQDK---KHFD----QTVINIIGQHEETINGTG---PKGLREKD---MDPLAVLVSSANAMDR 289 (328)
T ss_dssp HHHHHHHTTC---TTSC----HHHHHHHHHTTCCTBSCS---TTCCBGGG---SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCc----HHHHHHHHHhcCCCCCCC---CCCCCccc---CCHHHHHHHHHHHHHH
Confidence 8899855444 2454 457778888875443321 12233222 3346778888887774
No 17
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=97.07 E-value=0.002 Score=60.54 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=49.5
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCCCH
Q 010059 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYST 439 (519)
Q Consensus 360 ~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~s~ 439 (519)
..|..+|.++|..|-... + .+..++.+||+|||||......+ +..++.++..--.=.|++.
T Consensus 27 ~~H~~rV~~~a~~ia~~~----~--------------~d~~~v~~AAlLHDig~~~~~~~-~~~~a~~a~~~L~~~g~~~ 87 (209)
T 3b57_A 27 WSHIKRVWKLSKEIQSKE----G--------------GDLFTIELAALFHDYSDIKLTTD-EQEATKTLINWMETKEIPS 87 (209)
T ss_dssp HHHHHHHHHHHHHHHHHH----C--------------SCHHHHHHHHHHTTCCC--------CHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhccCcccCCCc-hHHHHHHHHHHHHHCCCCH
Confidence 489999999999875432 2 14689999999999998764443 2234433322100158999
Q ss_pred HHHHHHHHHHHhccCC
Q 010059 440 DEIKLIALLTRFHRKK 455 (519)
Q Consensus 440 ~E~~~iA~iaryh~k~ 455 (519)
.+...|..++..|+.+
T Consensus 88 ~~~~~V~~~I~~Hs~~ 103 (209)
T 3b57_A 88 ELIKKIIRIIQSVSFK 103 (209)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHcCcc
Confidence 9999999999988644
No 18
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=97.00 E-value=0.0032 Score=58.15 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCC-----------------------
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~----------------------- 417 (519)
.|+..|+.+|..|-..+ + +++ ..+..|++|||||+...+
T Consensus 22 ~Hs~~Va~~A~~lA~~~----g-----------~d~---~~~~~AgLLHDiGk~~~~~~il~~~~~~~~~l~~~E~~~~~ 83 (190)
T 3ccg_A 22 KHSLGVMDTAVRLAGIY----N-----------EDT---EKARIAGLVHDCAKKLPGEKIIEICTNEGYELGDEDIRNSY 83 (190)
T ss_dssp HHHHHHHHHHHHHHHHH----T-----------CCH---HHHHHHHHHTTTTTTSCHHHHHHHHHHTTCCCCHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHH----C-----------cCH---HHHHHHHHHHHhcCCCCHHHHHHHHHHcCCCCCHHHHhHHH
Confidence 79999999999775433 3 232 348899999999987542
Q ss_pred CchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhccccC
Q 010059 418 KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDC 493 (519)
Q Consensus 418 ~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld~s~~ 493 (519)
..|...+++++.+. .|+++++ ++..++||....|. . ..++.|+.+||.++..|.
T Consensus 84 ~~H~~~Ga~il~~~---~~~~~~~---i~~aI~~Hh~g~~~--------~--------~~~~~Iv~vAD~i~~~R~ 137 (190)
T 3ccg_A 84 LLHGLAGRILAKKV---IGIDDED---VLNAIEFHTTGRPN--------M--------SLLEKIIYIADYIEPGRE 137 (190)
T ss_dssp C-CHHHHHHHHHHT---TCCCCHH---HHHHHHTTTTCCSS--------C--------CHHHHHHHHHHHHSTTCC
T ss_pred cchHHHHHHHHHHh---cCCCcHH---HHHHHHHhcCCCCC--------C--------CHHHHHHHHHHhCCCCCC
Confidence 24777788887663 4664433 55667777752221 1 137789999999876664
No 19
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=96.91 E-value=0.007 Score=62.73 Aligned_cols=99 Identities=12% Similarity=0.069 Sum_probs=62.5
Q ss_pred cCCCCccEEEEEehh-hhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhc--cCCCCCCceEEEEECCCceEEE
Q 010059 82 HNISRDHTRAVATAA-VRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQ--FLPVFDRLVLSVDIGGGSTEFV 158 (519)
Q Consensus 82 ~~v~~~~i~~vATsA-~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~--~~~~~~~~~lv~DIGGGStEl~ 158 (519)
.++++.+..++-|.. .-...+++...+.+.+..|++.-.+-- |+.++.+++.. .++..+..++|+|+|||.|.++
T Consensus 101 L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~--ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~ 178 (418)
T 1k8k_A 101 LRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAV--QAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVI 178 (418)
T ss_dssp TCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEE--HHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEE
T ss_pred cCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEec--hHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEE
Confidence 455544444555543 222234555666666778998554432 23333333211 2222223689999999999999
Q ss_pred EeeCCeEeee--eeeehhHHHHHHhh
Q 010059 159 IGKRGKVVFC--ESVNLGHVSLSEKF 182 (519)
Q Consensus 159 ~~~~~~~~~~--~SlplG~vrl~e~f 182 (519)
.+.+|.++.. ..+++|.-.+++.+
T Consensus 179 ~v~~G~~~~~~~~~~~lGG~~lt~~l 204 (418)
T 1k8k_A 179 PVAEGYVIGSCIKHIPIAGRDITYFI 204 (418)
T ss_dssp EEETTEECGGGCEEESCSHHHHHHHH
T ss_pred EeECCEEcccceEEEeCcHHHHHHHH
Confidence 9999988876 88999998888754
No 20
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=96.87 E-value=0.0038 Score=59.26 Aligned_cols=78 Identities=15% Similarity=0.028 Sum_probs=49.9
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCCC
Q 010059 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (519)
Q Consensus 359 ~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~s 438 (519)
+..|..+|.++|..|.... + .+..++.+||+|||||..- +.+|..-++.++..-=.=.||+
T Consensus 26 ~~~H~~rV~~~a~~ia~~~----~--------------~d~~~l~~AalLHDig~~k-~~~~~~~ga~~a~~~L~~~g~~ 86 (223)
T 3dto_A 26 DWYHIRRVTLMAKAIGEQE----K--------------VDVFVVQIAALFHDLIDDK-LVDDPETAKQQLIDWMEAAGVP 86 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHT----T--------------CCHHHHHHHHHHHSTTC--------CHHHHHHHHHHHTTTCC
T ss_pred cHHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhhccccc-cCCCHHHHHHHHHHHHHHcCCC
Confidence 4489999999999886431 2 2468999999999999753 3333333443332110026899
Q ss_pred HHHHHHHHHHHHhccCC
Q 010059 439 TDEIKLIALLTRFHRKK 455 (519)
Q Consensus 439 ~~E~~~iA~iaryh~k~ 455 (519)
..+...|..++..|+.+
T Consensus 87 ~~~i~~V~~~I~~Hs~~ 103 (223)
T 3dto_A 87 SQKIDHTMDIINTISFK 103 (223)
T ss_dssp HHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 99999999999988643
No 21
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1
Probab=96.86 E-value=0.0046 Score=58.78 Aligned_cols=78 Identities=10% Similarity=-0.021 Sum_probs=50.8
Q ss_pred cchhHHHHHHHHHHH-HHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCC
Q 010059 359 RVKAGAQCASIAKDI-FEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGY 437 (519)
Q Consensus 359 ~~~ha~~V~~~a~~l-fd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~ 437 (519)
+..|..+|.++|..| -.. .+ . +..++.+||+|||||..... +.+.+..+...--.=.|+
T Consensus 26 ~~~H~~rV~~~a~~i~a~~----~~-----------~---d~~~l~lAAlLHDigk~~~~--~~~~ga~~a~~~L~~~g~ 85 (225)
T 2qgs_A 26 DIAHVERVYNNACYIAKRE----NI-----------T---DTLVIELSSLLHDTVDSKLT--DEILAYDQLKQFLSTLDL 85 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHT----TC-----------S---CCHHHHHHHHHTTTTCCSSS--CHHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHHHHHHhhc----cC-----------C---CHHHHHHHHHHHcCCCCCCC--cHHHHHHHHHHHHHHCCC
Confidence 348999999999877 321 12 1 35789999999999984322 334444332211002589
Q ss_pred CHHHHHHHHHHHHhccCCC
Q 010059 438 STDEIKLIALLTRFHRKKF 456 (519)
Q Consensus 438 s~~E~~~iA~iaryh~k~~ 456 (519)
+..+...|..++++|+...
T Consensus 86 ~~~~i~~V~~~I~~Hs~~~ 104 (225)
T 2qgs_A 86 SSEISQQVLYIIKHMSYRA 104 (225)
T ss_dssp CHHHHHHHHHHHHTTC---
T ss_pred CHHHHHHHHHHHHHcCccc
Confidence 9999999999999987543
No 22
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=96.85 E-value=0.004 Score=57.35 Aligned_cols=93 Identities=16% Similarity=0.206 Sum_probs=62.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccC----------------------CC
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS----------------------KK 418 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~----------------------~~ 418 (519)
.|+..|+.+|..|-..+ + +++ ..+.+|++|||||+... ..
T Consensus 21 ~Hs~~Va~~A~~lA~~~----g-----------~~~---~~~~~agLLHDIGk~~~~~~il~~~~~~~~~l~~~e~~~~~ 82 (188)
T 2o08_A 21 QHTIGVMETAIDLAKLY----G-----------ADQ---QKAELAAIFHDYAKFRDKNEMRTLIREKLSQQDILFYGDEL 82 (188)
T ss_dssp HHHHHHHHHHHHHHHHH----T-----------CCH---HHHHHHHHHTTTTTTSCHHHHHHHHHHHCSCCGGGGSCGGG
T ss_pred HHHHHHHHHHHHHHHHH----C-----------cCH---HHHHHHHHHHHHcCCCCHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 79999999999774433 3 222 34889999999999842 13
Q ss_pred chhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhccccC
Q 010059 419 GYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDC 493 (519)
Q Consensus 419 ~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld~s~~ 493 (519)
.|...+++++... .|+++++ +...++||....| .. ..++.|+.+||.++..|.
T Consensus 83 ~H~~~G~~il~~~---~~~~~~~---i~~aI~~Hh~g~~--------~~--------~~~~~Iv~vAD~i~~~r~ 135 (188)
T 2o08_A 83 LHAPCGAYYVREE---VGIEDED---VLQAIRFHTTGRP--------NM--------SLLEKIIFLADYIEPNRQ 135 (188)
T ss_dssp SHHHHHHHHHHHH---HCCCCHH---HHHHHHTTTTCCT--------TC--------CHHHHHHHHHHHHSTTCC
T ss_pred hHHHHHHHHHHHc---cCCChHH---HHHHHHHhccCCC--------CC--------CHHHHhhhhhccCCCCCC
Confidence 5777888888662 3554333 5566677774222 11 137789999999876654
No 23
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.85 E-value=0.0075 Score=61.69 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEE
Q 010059 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSV 148 (519)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~ 148 (519)
..|+..++.++.+ +.+..++ +++.-+.=.. ...+.+..+-+..|+++..+--|=+|-..+.|.... ..+...+|+
T Consensus 136 ~~l~~l~~~a~~~~~~~~~~~-vitvP~~~~~-~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~vlV~ 211 (394)
T 3qfu_A 136 MILGKMKQIAEDYLGTKVTHA-VVTVPAYFND-AQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKS--DKEHQIIVY 211 (394)
T ss_dssp HHHHHHHHHHHHHHTSCCCEE-EEEECTTCCH-HHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSC--SSCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcceE-EEEECCCCCH-HHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccC--CCCceEEEE
Confidence 3456666666554 4332222 2322222111 222334444467899965444444444434443322 124557999
Q ss_pred EECCCceEEEEeeCCeEee-----eeeeehhHHHHHHhh
Q 010059 149 DIGGGSTEFVIGKRGKVVF-----CESVNLGHVSLSEKF 182 (519)
Q Consensus 149 DIGGGStEl~~~~~~~~~~-----~~SlplG~vrl~e~f 182 (519)
|+|||+|.+++++.+...+ ..+.++|.-.+.+.+
T Consensus 212 D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l 250 (394)
T 3qfu_A 212 DLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKI 250 (394)
T ss_dssp EECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHH
Confidence 9999999999886332222 455789988887754
No 24
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=96.83 E-value=0.0037 Score=65.97 Aligned_cols=77 Identities=17% Similarity=0.172 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeeeeeehhHHHHHHhh
Q 010059 103 KDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (519)
Q Consensus 103 ~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (519)
-+.+.+.+++.+|++|+|=. -|++-+-+|++..-. .+-...++|+|||||.+++|.+|.+.++.++|+|.--+|...
T Consensus 370 m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-~eLGvaiIDmGGGTTd~sVf~~G~lv~a~~ip~gG~~VT~DI 446 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-TTRPLAILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMII 446 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECTTCCEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 45688888888899888766 888888888886432 344589999999999999999999999999999999988854
No 25
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=96.78 E-value=0.004 Score=65.91 Aligned_cols=76 Identities=18% Similarity=0.112 Sum_probs=64.3
Q ss_pred HHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeeeeeehhHHHHHHhh
Q 010059 104 DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (519)
Q Consensus 104 ~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (519)
+.+.+.+++.+|++|+|=. -|++-+-+|++..-. .+-...++|+|||||.+++|.+|.+.++.++|+|.--+|...
T Consensus 373 ~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-~elGvaiIDmGgGTTd~sVf~~g~lv~a~~ip~gG~~VT~DI 448 (607)
T 1nbw_A 373 QVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-CAAPLAILDLGAGSTDAAIVNAEGQITAVHLAGAGNMVSLLI 448 (607)
T ss_dssp CCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECSSSCEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 4478888888899888866 888888888886432 344589999999999999999999999999999999988854
No 26
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=96.78 E-value=0.0021 Score=61.46 Aligned_cols=78 Identities=10% Similarity=0.025 Sum_probs=50.0
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCCC
Q 010059 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (519)
Q Consensus 359 ~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~s 438 (519)
+..|..+|.++|..|-... + .+..++.+||+|||||..- +..+...++.+...-=.=.||+
T Consensus 31 ~~~H~~rV~~~a~~ia~~~----~--------------~d~~ll~lAAlLHDigk~k-~~~~~~~ga~~a~~~L~~~g~~ 91 (231)
T 2pjq_A 31 GRDHLQRVNRLARRLAKDE----G--------------ANLNLTLAAAWLHDVIDDK-LMANPAKAHQDLIVQLNAQNVT 91 (231)
T ss_dssp SHHHHHHHHHHHHHHHHHH----T--------------CCHHHHHHHHHHHHHHC----------CHHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHHcCCccc-CCChHHHHHHHHHHHHHHCCCC
Confidence 3489999999999875432 2 1468999999999999842 3333233333322110015899
Q ss_pred HHHHHHHHHHHHhccCC
Q 010059 439 TDEIKLIALLTRFHRKK 455 (519)
Q Consensus 439 ~~E~~~iA~iaryh~k~ 455 (519)
..+...|..++..|+.+
T Consensus 92 ~~~~~~V~~~I~~Hs~~ 108 (231)
T 2pjq_A 92 ADDQTAIFAIIDHMSFS 108 (231)
T ss_dssp HHHHHHHHHHHTSCCTG
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 99999999999988643
No 27
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=96.65 E-value=0.0054 Score=56.96 Aligned_cols=93 Identities=16% Similarity=0.084 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCC----------------------C
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------K 418 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~----------------------~ 418 (519)
.|+..|+.+|..|-..+ + +++ ..+..|++|||||+...+ .
T Consensus 29 ~Hs~~Va~~A~~lA~~~----g-----------~d~---~~~~~AgLLHDIGK~~~~~~il~~~~~~~~~l~~~E~~~~~ 90 (196)
T 2ogi_A 29 NHVLGVERAAIELAERY----G-----------YDK---EKAGLAALLHDYAKELSDDEFLRLIDKYQPDPDLKKWGNNI 90 (196)
T ss_dssp HHHHHHHHHHHHHHHHH----T-----------CCH---HHHHHHHHHTTTTTTCCHHHHHHHHHHHCCCTGGGGSCHHH
T ss_pred HHHHHHHHHHHHHHHHH----C-----------cCH---HHHHHHHHHHHcCCcCCHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 79999999999775433 3 222 348899999999998432 2
Q ss_pred chhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhccccC
Q 010059 419 GYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQNDC 493 (519)
Q Consensus 419 ~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld~s~~ 493 (519)
.|...+++++... .|+++++ ++..++||....| ..+ .++.|+.+||.++..|.
T Consensus 91 ~H~~~G~~ll~~~---~~~~~~~---i~~aI~~Hh~g~~--------~~~--------~~~~Iv~vAD~i~~~R~ 143 (196)
T 2ogi_A 91 WHGLVGIYKIQED---LAIKDQD---ILAAIAKHTVGSA--------QMS--------TLDKIVYVADYIEHNRD 143 (196)
T ss_dssp HHHHTHHHHHHHH---SCCCCHH---HHHHHHTTTTCCS--------SCC--------HHHHHHHHHHHHCTTCC
T ss_pred ccHHHHHHHHHHc---cCCCcHH---HHHHHHHhcCCCC--------CCC--------HHHHhhhhheecCCCCC
Confidence 3777778877662 4564433 5566677775222 111 37789999999876654
No 28
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=96.57 E-value=0.0043 Score=58.92 Aligned_cols=78 Identities=13% Similarity=0.033 Sum_probs=53.0
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCCC
Q 010059 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (519)
Q Consensus 359 ~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~s 438 (519)
+..|..+|.++|..|-.. .+ .+..++.+||+|||||.. -+.+|..-++.++..-=.=.||+
T Consensus 26 ~~~H~~rV~~~a~~ia~~----~~--------------~d~~~l~~AAlLHDig~~-k~~~h~~~ga~~a~~~L~~~g~~ 86 (223)
T 3djb_A 26 DWYHIRRVHKMAISLSEQ----EG--------------GNRFIIEMAALLHDVADE-KLNESEEAGMKKVSDWLEELHVE 86 (223)
T ss_dssp THHHHHHHHHHHHHHHTT----TC--------------SCHHHHHHHHTTHHHHC---CCSSSTTTHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHHHHHHH----cC--------------CCHHHHHHHHHHhhcccc-ccCCcHHHHHHHHHHHHHHCCCC
Confidence 458999999999977532 12 247899999999999984 33444454543332110016899
Q ss_pred HHHHHHHHHHHHhccCC
Q 010059 439 TDEIKLIALLTRFHRKK 455 (519)
Q Consensus 439 ~~E~~~iA~iaryh~k~ 455 (519)
..+...|..+++.|+.+
T Consensus 87 ~~~i~~V~~~I~~Hs~~ 103 (223)
T 3djb_A 87 EEESKHVLHIIANMSYK 103 (223)
T ss_dssp HHHHHHHHHHTTCCC--
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 99999999999988643
No 29
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=96.53 E-value=0.017 Score=58.97 Aligned_cols=93 Identities=15% Similarity=0.157 Sum_probs=61.3
Q ss_pred HcCCCCccEEEEEehh-hhhcCChHHHHHHHHHHhCCce-EeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEE
Q 010059 81 SHNISRDHTRAVATAA-VRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (519)
Q Consensus 81 ~~~v~~~~i~~vATsA-~R~A~N~~~f~~~i~~~tG~~i-~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~ 158 (519)
..++++.+..++-|.. .-...+++.+.+.+.+..|++. .++. |+-++.+|.- . ..++|+|+|||.|.++
T Consensus 93 ~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~---e~~aaa~a~g--~----~~~lVvDiG~gtt~v~ 163 (375)
T 2fxu_A 93 ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI---QAVLSLYASG--R----TTGIVLDSGDGVTHNV 163 (375)
T ss_dssp TSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEE---HHHHHHHHTT--C----SSEEEEEECSSCEEEE
T ss_pred hcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEcc---chheeeeecC--C----CeEEEEEcCCCceEEe
Confidence 3466554444455543 2223345557777777788874 4443 4444444422 1 3489999999999999
Q ss_pred EeeCCeEee--eeeeehhHHHHHHhh
Q 010059 159 IGKRGKVVF--CESVNLGHVSLSEKF 182 (519)
Q Consensus 159 ~~~~~~~~~--~~SlplG~vrl~e~f 182 (519)
.+.+|.+.. ..++|+|.-.+++.+
T Consensus 164 ~v~~G~~~~~~~~~~~~GG~~lt~~l 189 (375)
T 2fxu_A 164 PIYEGYALPHAIMRLDLAGRDLTDYL 189 (375)
T ss_dssp EEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EeECCEEeccceEEeccCHHHHHHHH
Confidence 999998776 468999998888754
No 30
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=96.12 E-value=0.048 Score=54.69 Aligned_cols=74 Identities=20% Similarity=0.208 Sum_probs=53.1
Q ss_pred HHHHHHHHHhCCceE-eeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeeeeeehhHHHHHHhh
Q 010059 105 EFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (519)
Q Consensus 105 ~f~~~i~~~tG~~i~-iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (519)
+.+.++-+..|+++- +++...=|-+.| |.. .. .+..++|+|+|||+|.++.+..+.+....++++|.-.+++.+
T Consensus 112 ~~~~~a~~~aG~~~~~li~ep~Aaa~~~-~~~--~~-~~~~~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id~~l 186 (344)
T 1jce_A 112 RAILDAGLEAGASKVFLIEEPMAAAIGS-NLN--VE-EPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAI 186 (344)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHHHHHT-TCC--TT-SSSCEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEeccCCHHHHHHhc-CCC--CC-CCceEEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHHHHH
Confidence 344445567899864 555444444433 322 11 234689999999999999999999999999999998888765
No 31
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=96.01 E-value=0.11 Score=55.41 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceE-eeChHHHHHHHHhhhhccCCCCCCceE
Q 010059 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (519)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~-iIsg~eEA~l~~~gv~~~~~~~~~~~l 146 (519)
...|+..++.++++ +-+..+ +|-|--.---......+..+-+..|+++- +++...=|-+.| |.... .+...+
T Consensus 91 a~~L~~l~~~ae~~l~~~~~~--~VitvPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay-~~~~~---~~~~vl 164 (509)
T 2v7y_A 91 AIILQYLKSYAEDYLGEPVTR--AVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAY-GLDKE---EDQTIL 164 (509)
T ss_dssp HHHHHHHHHHHHHHHTSCCCE--EEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHT-TGGGS---CSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCe--EEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHH-hhccC---CCCEEE
Confidence 34456666655553 433222 23332211111122334444567899864 555554444443 44321 245689
Q ss_pred EEEECCCceEEEEee--CCeEe---eeeeeehhHHHHHHhh
Q 010059 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (519)
Q Consensus 147 v~DIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (519)
|+|+|||+|.+++++ +|.+. ...+.++|.-.+.+.+
T Consensus 165 V~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l 205 (509)
T 2v7y_A 165 VYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVI 205 (509)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHH
Confidence 999999999999887 45432 2345689988777654
No 32
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=95.87 E-value=0.14 Score=50.89 Aligned_cols=96 Identities=16% Similarity=0.149 Sum_probs=59.6
Q ss_pred CCCCccEEEEEehhhhh------cCChHHHHHHHHHHh-------C-----CceEeeChHHHHHHHHhhhhccCCCCCCc
Q 010059 83 NISRDHTRAVATAAVRA------AENKDEFVECVREKV-------G-----FEVDVLTGEQEAKFVYMGVLQFLPVFDRL 144 (519)
Q Consensus 83 ~v~~~~i~~vATsA~R~------A~N~~~f~~~i~~~t-------G-----~~i~iIsg~eEA~l~~~gv~~~~~~~~~~ 144 (519)
+.++.++.+|.+--+.+ .+|.+.+-++.+... | -+++++...-=|.+.+. .... .+..
T Consensus 90 ~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~---~~~~-~~~~ 165 (320)
T 2zgy_A 90 GLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVL---QELD-ELDS 165 (320)
T ss_dssp SCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHH---HHSC-TTCE
T ss_pred CCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhh---cccc-CCCC
Confidence 44433466666654442 235566666543211 1 14556665555555443 2222 2345
Q ss_pred eEEEEECCCceEEEEeeCCeE-ee--eeeeehhHHHHHHhh
Q 010059 145 VLSVDIGGGSTEFVIGKRGKV-VF--CESVNLGHVSLSEKF 182 (519)
Q Consensus 145 ~lv~DIGGGStEl~~~~~~~~-~~--~~SlplG~vrl~e~f 182 (519)
.+++|||||.|+++++++|.+ .. +.+.++|.-.+++..
T Consensus 166 ~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I 206 (320)
T 2zgy_A 166 LLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAV 206 (320)
T ss_dssp EEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHH
T ss_pred EEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHH
Confidence 899999999999999998865 33 578999998888753
No 33
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=95.51 E-value=0.0039 Score=59.78 Aligned_cols=77 Identities=13% Similarity=0.176 Sum_probs=51.7
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCC----CchhhhhHHHH---HcCC
Q 010059 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----KGYHKQSCHII---MNGD 432 (519)
Q Consensus 360 ~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~----~~h~~Hs~yiI---~ns~ 432 (519)
..|..+|.++|..|-. ..+ .+..++.+||+|||||..-.+ ..|..-++.++ +...
T Consensus 27 ~~H~~rV~~~a~~ia~----~~~--------------~d~~~~~~AalLHDig~~~~~~~~~~~H~~~ga~~A~~~L~~~ 88 (239)
T 3gw7_A 27 VCHFRRVWATAQKLAA----DDD--------------VDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREE 88 (239)
T ss_dssp CCHHHHHHHHHHHHTT----TSC--------------SCTTHHHHHHHHTTTTC--------CCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HcC--------------CCHHHHHHHHHHhhcccccccCCccccHHHHHHHHHHHHHHhc
Confidence 3799999999986632 112 245789999999999986322 12334444332 3332
Q ss_pred CCCCCCHHHHHHHHHHHHhccCC
Q 010059 433 HLYGYSTDEIKLIALLTRFHRKK 455 (519)
Q Consensus 433 ~l~G~s~~E~~~iA~iaryh~k~ 455 (519)
+.||+..+...|..+++.|+.+
T Consensus 89 -~~g~~~e~i~~V~~~I~~Hs~~ 110 (239)
T 3gw7_A 89 -FEQFPAEKIEAVCHAIAAHSFS 110 (239)
T ss_dssp -TTSSCTTTTTSTTTGGGSSCTT
T ss_pred -cCCcCHHHHHHHHHHHHHcCCC
Confidence 4799999999999999888754
No 34
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.33 E-value=0.29 Score=48.35 Aligned_cols=141 Identities=16% Similarity=0.151 Sum_probs=87.7
Q ss_pred ccccccCCCceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 010059 4 NTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHN 83 (519)
Q Consensus 4 ~~~~~~~~~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~ 83 (519)
|||+ ..+..||+|..++++.+++. +|. ++.+.+.++... . =.++.++.+.++++++. ++.+
T Consensus 2 ~~m~-----~~~lgiDiggt~~~~~l~d~--~g~--il~~~~~~~~~~----~---~~~~~~~~l~~~i~~~~---~~~~ 62 (326)
T 2qm1_A 2 NAMD-----KKIIGIDLGGTTIKFAILTT--DGV--VQQKWSIETNIL----E---DGKHIVPSIIESIRHRI---DLYN 62 (326)
T ss_dssp CGGG-----CEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCCT----T---TTTTHHHHHHHHHHHHH---HHTT
T ss_pred CCcc-----cEEEEEEECCCEEEEEEECC--CCC--EEEEEEEcCCCC----C---CHHHHHHHHHHHHHHHH---HHcC
Confidence 6775 46789999999999999975 354 344444433211 0 12455676777776664 3455
Q ss_pred CCCccEEE--EEehhhhhc--------CC----hH-HHHHHHHHHhCCceEeeChHHHHHHH--HhhhhccCCCCCCceE
Q 010059 84 ISRDHTRA--VATAAVRAA--------EN----KD-EFVECVREKVGFEVDVLTGEQEAKFV--YMGVLQFLPVFDRLVL 146 (519)
Q Consensus 84 v~~~~i~~--vATsA~R~A--------~N----~~-~f~~~i~~~tG~~i~iIsg~eEA~l~--~~gv~~~~~~~~~~~l 146 (519)
++..++.+ ++....-+. .| .. .+.+.+++++|++|.+.+.-.=+-+. +.|... ..++.+
T Consensus 63 ~~~~~i~~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g~~~----~~~~~~ 138 (326)
T 2qm1_A 63 MKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGE----NNPDVI 138 (326)
T ss_dssp CCGGGEEEEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEE
T ss_pred CCccceeEEEEecccceeCCCCEEEecCCCCccCCchHHHHHHHHhCCCEEEecHHHHHHHHHHHhCCCC----CCCcEE
Confidence 54444543 445553222 12 12 67888899999999998766555444 223221 224589
Q ss_pred EEEECCCceEEEEeeCCeEeee
Q 010059 147 SVDIGGGSTEFVIGKRGKVVFC 168 (519)
Q Consensus 147 v~DIGGGStEl~~~~~~~~~~~ 168 (519)
++-+|.| +-..+..+|++...
T Consensus 139 ~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 139 FITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp EEEESSS-EEEEEEETTEECCC
T ss_pred EEEECCc-eEEEEEECCEEeec
Confidence 9999999 66777778887653
No 35
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=95.27 E-value=0.025 Score=57.21 Aligned_cols=62 Identities=11% Similarity=0.053 Sum_probs=44.1
Q ss_pred ceEeeChHHHHHHHHhhhhccCCC--CCCceEEEEECCCceEEEEee--CCeEee--eeeeehhHHHHHHh
Q 010059 117 EVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGK--RGKVVF--CESVNLGHVSLSEK 181 (519)
Q Consensus 117 ~i~iIsg~eEA~l~~~gv~~~~~~--~~~~~lv~DIGGGStEl~~~~--~~~~~~--~~SlplG~vrl~e~ 181 (519)
++++++..-=|.+.|+ ...+. ++...+|+|||||+|+++++. +|.++. +.++++|.-.+++.
T Consensus 165 ~v~li~Ep~AAa~~~l---~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~ 232 (346)
T 2fsj_A 165 RLIMRPQGVGAALYLL---NQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISA 232 (346)
T ss_dssp EEEEEETTHHHHHHHH---HHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHH
T ss_pred EEEEEccHHHHHHHhh---ccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHH
Confidence 3667777776666662 22212 224469999999999999999 776666 58999998766553
No 36
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=94.96 E-value=0.045 Score=54.24 Aligned_cols=95 Identities=19% Similarity=0.100 Sum_probs=64.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCC-----------------------
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~----------------------- 417 (519)
.|+.+|+.+|..|-..+ + ++ +...+..|++|||||+..=+
T Consensus 121 ~hs~~va~~a~~la~~~----~-----------~~--~~~~~~~agllHDIGkl~l~~~~p~~~~~il~~~~~~~~~l~~ 183 (305)
T 3hc1_A 121 AHSLGVARIAKLIAERT----G-----------FL--NPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQ 183 (305)
T ss_dssp HHHHHHHHHHHHHHHHT----T-----------CS--CHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHHHHc----C-----------CC--CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 79999999998775432 3 11 24668899999999986521
Q ss_pred -------CchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhcc
Q 010059 418 -------KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 490 (519)
Q Consensus 418 -------~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld~ 490 (519)
..|..-+++++.+.+ ++ ..++.+++||....... . ....++.|+.+|+.++.
T Consensus 184 ~E~~~~~~~H~~iG~~ll~~w~-lp-------~~i~~~I~~HHe~~~~~---------~----~~~~~a~Iv~lAD~~~~ 242 (305)
T 3hc1_A 184 AEERLFGTSHCEVGFALAKRWS-LN-------EFICDTILYHHDIEAVP---------Y----KQAAIVAMVAFADEYCT 242 (305)
T ss_dssp HHHHHHSSCHHHHHHHHHHHTT-CC-------HHHHHHHHHTTCGGGCS---------S----SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHcC-CC-------HHHHHHHHHhCChhhcc---------c----cccHHHHHHHHHHHHHH
Confidence 368888888888775 54 35666777877421110 0 12247889999999987
Q ss_pred ccC
Q 010059 491 NDC 493 (519)
Q Consensus 491 s~~ 493 (519)
-..
T Consensus 243 ~~~ 245 (305)
T 3hc1_A 243 LRR 245 (305)
T ss_dssp HTT
T ss_pred HhC
Confidence 543
No 37
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.94 E-value=0.039 Score=56.98 Aligned_cols=60 Identities=20% Similarity=0.200 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccc---------c-CCCchhhhhHHHHHc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF---------T-SKKGYHKQSCHIIMN 430 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~---------I-~~~~h~~Hs~yiI~n 430 (519)
+|+--|+.+|..+...+..... .+++.+..++++||+|||||.. + ....|...|..++.+
T Consensus 58 ~HSLgV~~la~~l~~~l~~~~~----------~~~~~d~~~~~~AaLlHDiGh~PfsH~~E~~~~~~~~He~~s~~ii~~ 127 (410)
T 2q14_A 58 QHSLGAFYLMSEAITQLTSKGN----------FIFDSEAEAVQAAILLHDIGHGPFSHVLEDTIVQGVSHEEISLMLMER 127 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHTTTTCCTTHHHHHTTTSTTCCHHHHHHHHHHH
T ss_pred ehHHHHHHHHHHHHHHHHhcCC----------CCCHHHHHHHHHHHHHhccCCCccccccHHhhcCCCCHHHHHHHHHHH
Confidence 7999999999999988764321 2555678999999999999982 2 246777778777764
No 38
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=94.63 E-value=0.033 Score=55.88 Aligned_cols=41 Identities=20% Similarity=0.136 Sum_probs=35.9
Q ss_pred CCceEEEEECCCceEEEEeeCCeEe--eeeeeehhHHHHHHhh
Q 010059 142 DRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (519)
Q Consensus 142 ~~~~lv~DIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (519)
+...+++|||||+|+++++.++.+. .+.|+|+|.-.+++..
T Consensus 171 ~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i 213 (329)
T 4apw_A 171 NKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRV 213 (329)
T ss_dssp TCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred cCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHH
Confidence 4568999999999999999999998 4579999999988854
No 39
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=94.51 E-value=0.18 Score=51.52 Aligned_cols=110 Identities=18% Similarity=0.238 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCce-EeeChHHHHHHHHhhhhccCCC-CCCceE
Q 010059 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPV-FDRLVL 146 (519)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i-~iIsg~eEA~l~~~gv~~~~~~-~~~~~l 146 (519)
..|+..++.++.+ +.+.. .+|-|--.---....+.+.++-+..|+++ .+++..+-|-+.| +.....+. .+...+
T Consensus 141 ~~L~~l~~~a~~~~~~~~~--~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~~~~~~vl 217 (404)
T 3i33_A 141 MVLTKMKEIAEAYLGGKVH--SAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY-GLDKKGCAGGEKNVL 217 (404)
T ss_dssp HHHHHHHHHHHHHHSSCCC--EEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHT-TTTSSCSSSSCCEEE
T ss_pred HHHHHHHHHHHHHhccCCC--cEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHH-HhhcccccCCCceEE
Confidence 3455555555543 44322 23433221111222344455556789985 5566555555544 44332211 235589
Q ss_pred EEEECCCceEEEEee--CCeEe---eeeeeehhHHHHHHhh
Q 010059 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (519)
Q Consensus 147 v~DIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (519)
|+|+|||+|.+++++ ++.+. ...+.++|.-.+.+.+
T Consensus 218 V~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 258 (404)
T 3i33_A 218 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 258 (404)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 999999999999885 44332 2445789988777654
No 40
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=94.44 E-value=0.45 Score=46.03 Aligned_cols=115 Identities=16% Similarity=0.218 Sum_probs=63.0
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE-
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV- 92 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~v- 92 (519)
++..||+||.+++.++++ ++| +++.....+.. + . ..+++.++ +++..+ .+++..++..+
T Consensus 4 ~~lGiD~Gst~~k~~l~d--~~g--~i~~~~~~~~~-~-------~-~~~~~~~~---l~~l~~----~~~~~~~i~~i~ 63 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILK--DGK--EIVAKSLVAVG-T-------G-TSGPARSI---SEVLEN----AHMKKEDMAFTL 63 (270)
T ss_dssp EEEEEEECSSEEEEEEEE--TTT--EEEEEEEEECC-S-------S-CCHHHHHH---HHHHHH----HTCCGGGCSEEE
T ss_pred EEEEEEeccceEEEEEEe--CCC--CEEEEEEecCC-C-------C-HHHHHHHH---HHHHHH----cCCChhHEEEEE
Confidence 578999999999999985 345 34554433331 1 1 11444433 333322 13333344434
Q ss_pred EehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEe
Q 010059 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (519)
Q Consensus 93 ATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~ 166 (519)
+|-.-|..-.. +...+++ |-+|. +.|+....+ +. ..++||||+.+.++.+++|++.
T Consensus 64 ~TG~g~~~~~~------------~~~~~v~-Ei~ah--~~ga~~~~~--~~-~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 64 ATGYGRNSLEG------------IADKQMS-ELSCH--AMGASFIWP--NV-HTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp EESTTTTTTTT------------TCSEEEC-HHHHH--HHHHHHHCT--TC-CEEEEEETTEEEEEEEETTEEE
T ss_pred EeCccccchhh------------cCCCCcc-cHHHH--HHHHHHhCC--CC-CEEEEECCCceEEEEEeCCcee
Confidence 45544432111 1223343 33333 345544343 22 3789999999999999999865
No 41
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=94.40 E-value=0.19 Score=53.23 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=87.8
Q ss_pred EEEEEecccceeeeEEEEeCCCCEE-----EEEeee----eeeeccCC-C------------CcCCCCC-HHHHHHHHHH
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFL-----TIDTLK----QPVILGRD-L------------SSSCSIS-TQSQARSVES 71 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~-----~i~~~k----~~vrLg~~-~------------~~~g~ls-~e~i~~~~~~ 71 (519)
.-|||+||.++|.-.+. ++.++ ++-+.+ ...-+|.. . .++|.+. -+.+++..+-
T Consensus 25 ~iVID~GS~~~kaG~ag---~~~P~~v~PSvVg~~~~~~~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~~ 101 (498)
T 3qb0_A 25 AVVIDPGSYTTNIGYSG---SDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQW 101 (498)
T ss_dssp CEEEECCSSEEEEEETT---CSSCSEEEESEEEEESSCSSCCEECCTTGGGSCCTTEEEEESEETTEESCHHHHHHHHHH
T ss_pred eEEEECCCcEEEEEECC---CCCeeeecCceeEEeccCCCccEEEecHHHhcCcCceEEeccCcCCEEccHHHHHHHHHH
Confidence 36899999999876542 12211 222211 12234442 1 1345544 3555544443
Q ss_pred HHHHHHHHHHcCCCCccE-EEEEehhhhh-cCChHHHHHHHHHHhCCce-EeeChHHHHHHHHhhhhccCCCCCCceEEE
Q 010059 72 LLMFRDIIQSHNISRDHT-RAVATAAVRA-AENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSV 148 (519)
Q Consensus 72 L~~f~~~~~~~~v~~~~i-~~vATsA~R~-A~N~~~f~~~i~~~tG~~i-~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~ 148 (519)
+ |. +..++.+.+- .++-|.+.-. ..|++.+.+.+.+..|.+- -++. ++-++.+|.- . ..++|+
T Consensus 102 ~--f~---~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~---~~vlalya~G--~----~tglVV 167 (498)
T 3qb0_A 102 A--LQ---NELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAP---TSTCVSFAAG--R----PNCLVV 167 (498)
T ss_dssp H--HH---HTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEE---HHHHHHHHHT--C----SSEEEE
T ss_pred H--HH---hhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecc---hHHHHHHHcC--C----CeEEEE
Confidence 2 21 2345643322 3456654432 2366677777777778763 3333 4445544432 2 237999
Q ss_pred EECCCceEEEEeeCCeEee--eeeeehhHHHHHHhh
Q 010059 149 DIGGGSTEFVIGKRGKVVF--CESVNLGHVSLSEKF 182 (519)
Q Consensus 149 DIGGGStEl~~~~~~~~~~--~~SlplG~vrl~e~f 182 (519)
|+|+|.|+++.+-+|.++. ..++++|.-.+++.+
T Consensus 168 DiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L 203 (498)
T 3qb0_A 168 DIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLI 203 (498)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHH
T ss_pred EcCCCcEEEEEEeCCEEccccceeccccHHHHHHHH
Confidence 9999999999999998873 567999998888753
No 42
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=94.12 E-value=0.29 Score=52.55 Aligned_cols=109 Identities=19% Similarity=0.284 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCce-EeeChHHHHHHHHhhhhccCCCCCCceE
Q 010059 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (519)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i-~iIsg~eEA~l~~~gv~~~~~~~~~~~l 146 (519)
...|+..++.++.+ |-+.. .+|-|--.---......+..+-+..|+++ ++++...-|-+.| |.....+ .+...+
T Consensus 121 a~~L~~lk~~ae~~lg~~v~--~~VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay-~~~~~~~-~~~~vl 196 (554)
T 1yuw_A 121 SMVLTKMKEIAEAYLGKTVT--NAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY-GLDKKVG-AERNVL 196 (554)
T ss_dssp HHHHHHHHHHHHHHHSSCCC--EEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHT-TCSTTCS-SCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCC--eEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHH-HhhccCC-CCcEEE
Confidence 34566666655554 43322 33433211111122333444556679986 4566555554444 4332211 235689
Q ss_pred EEEECCCceEEEEee--CCeEe---eeeeeehhHHHHHHh
Q 010059 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEK 181 (519)
Q Consensus 147 v~DIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~ 181 (519)
|+|+|||+|.+++++ +|.+. ...+.++|.-.+.+.
T Consensus 197 V~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~ 236 (554)
T 1yuw_A 197 IFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNR 236 (554)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred EEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHH
Confidence 999999999999987 67553 455678888777654
No 43
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=93.80 E-value=0.21 Score=50.67 Aligned_cols=109 Identities=17% Similarity=0.238 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceE-eeChHHHHHHHHhhhhccCCCCCCceE
Q 010059 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (519)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~-iIsg~eEA~l~~~gv~~~~~~~~~~~l 146 (519)
...|+..++.++.+ +.+..+ +|-|--.---....+.+.++-+..|+++. +++...=|-+.| +.... ..+...+
T Consensus 117 ~~~L~~l~~~a~~~~~~~~~~--~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~-~~~~~--~~~~~~l 191 (383)
T 1dkg_D 117 AEVLKKMKKTAEDYLGEPVTE--AVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTIA 191 (383)
T ss_dssp HHHHHHHHHHHHHHHSSCCCE--EEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHH-TCCC---CCEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCe--EEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHH-HhccC--CCCcEEE
Confidence 34455555555443 433222 33332221111223344444566899865 444444444433 32211 1234689
Q ss_pred EEEECCCceEEEEeeCC------eEe---eeeeeehhHHHHHHhh
Q 010059 147 SVDIGGGSTEFVIGKRG------KVV---FCESVNLGHVSLSEKF 182 (519)
Q Consensus 147 v~DIGGGStEl~~~~~~------~~~---~~~SlplG~vrl~e~f 182 (519)
|+|+|||+|.+++++.+ .+. ...+.++|.-.+.+.+
T Consensus 192 VvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l 236 (383)
T 1dkg_D 192 VYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (383)
T ss_dssp EEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHH
T ss_pred EEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 99999999999988743 222 2456799998887765
No 44
>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens}
Probab=93.71 E-value=0.14 Score=54.03 Aligned_cols=46 Identities=17% Similarity=0.272 Sum_probs=35.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF 414 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~ 414 (519)
+|+--|+.+|..+...|..... . ..+++++..++++||+|||||..
T Consensus 68 ~HSLgV~~la~~i~~~l~~~~~--~------~~~~~~d~~~v~~AaLlHDiGH~ 113 (528)
T 3u1n_A 68 EHSLGVGYLAGCLVHALGEKQP--E------LQISERDVLCVQIAGLCHDLGHG 113 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCG--G------GCCCHHHHHHHHHHHHHTTTTCB
T ss_pred HHHHHHHHHHHHHHHHHHhhCc--c------cCCCHHHHHHHHHHHHHhccCCC
Confidence 7999999999999988864321 0 01355677899999999999965
No 45
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A*
Probab=93.56 E-value=0.093 Score=54.88 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcccc--------CCCchhhhhHHHHHc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT--------SKKGYHKQSCHIIMN 430 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I--------~~~~h~~Hs~yiI~n 430 (519)
+|+--|+.+|..+.+.+...+. .. .+....+++.++.++++||+|||||..- -..+|-+.|..+|.+
T Consensus 89 ~HSLgV~~la~~i~~~l~~~~~--~~-~~~~~~~~~~~~~~v~~AaLlHDIGH~PFsH~~E~~~~~~HE~~s~~ii~~ 163 (480)
T 3irh_A 89 SHSLGVYEITRRICEIFQRNYS--VE-RLGENGWNDDERLITLCAALLHDVGHGPYSHTFEHIFDTNHEAITVQIITS 163 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSB--HH-HHGGGSBCGGGHHHHHHHHHHTTTTCCTTHHHHHHHHCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhCc--cc-cccccCCCHHHHHHHHHHHHHhccCCCCccchhhhccCCCHHHHHHHHHHc
Confidence 7999999999999998864321 00 0000025667788999999999999751 134677777777765
No 46
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=93.51 E-value=0.13 Score=52.32 Aligned_cols=76 Identities=24% Similarity=0.348 Sum_probs=54.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcccc----------CCCchhhhhHHHHHc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----------SKKGYHKQSCHIIMN 430 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I----------~~~~h~~Hs~yiI~n 430 (519)
.|+..|+.+|..|...+. ++++ .++.+||+|||||... .-.+|.+-|..++.+
T Consensus 53 ~Hsl~V~~~a~~ia~~~~---------------~~~~--~~~~~AaLLHDiG~~pfsh~~e~~~~~g~~He~~g~~i~~~ 115 (371)
T 2hek_A 53 EHSLGVYHITERICESLK---------------VKEK--ELVKLAGLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKE 115 (371)
T ss_dssp HHHHHHHHHHHHHHHHHT---------------CTTH--HHHHHHHHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC---------------CCHH--HHHHHHHHHHhcCccccccchHHHhccCCCHHHHHHHHHhc
Confidence 799999999998876542 2322 7899999999999976 346777778887653
Q ss_pred CC---CCCC-CCHHHHHHHHHHHHhcc
Q 010059 431 GD---HLYG-YSTDEIKLIALLTRFHR 453 (519)
Q Consensus 431 s~---~l~G-~s~~E~~~iA~iaryh~ 453 (519)
.+ -|-. +++++...|+.++..++
T Consensus 116 ~~i~~iL~~~~~~~~i~~I~~~I~~~~ 142 (371)
T 2hek_A 116 TEIYEILKQDYSHEDIERLVRITLGKP 142 (371)
T ss_dssp SHHHHHHHTTSCHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 10 0111 78888888888777543
No 47
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=93.46 E-value=1.3 Score=43.44 Aligned_cols=129 Identities=12% Similarity=0.094 Sum_probs=78.8
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccE---
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHT--- 89 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i--- 89 (519)
+++..||+|..++|..+++. +|. ++.+.+.+. ... .. =.++.++.+.++++++. ++.+++..++
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~--~G~--il~~~~~~~---~~~-~~--~~~~~~~~l~~~i~~~l---~~~~~~~~~i~~~ 77 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHAS--DGT--PLAMAEGGA---SAL-SQ--GIAKSWQAVLSTLEAAF---QQAGLPAAPASAC 77 (305)
T ss_dssp CEEEEEEECSSCEEEEEEET--TCC--EEEEEEESC---CCG-GG--CHHHHHHHHHHHHHHHH---HHTTCCCCCGGGE
T ss_pred CEEEEEEcCccceEEEEEcC--CCC--EEEEEeCCC---CCc-cc--CHHHHHHHHHHHHHHHH---HhcCCChhhhccc
Confidence 46889999999999999864 354 343332210 010 01 13456777777777664 3445544444
Q ss_pred -EEEEehhhhhcCChHHHHHHHHHHh--CCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEe
Q 010059 90 -RAVATAAVRAAENKDEFVECVREKV--GFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (519)
Q Consensus 90 -~~vATsA~R~A~N~~~f~~~i~~~t--G~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~ 166 (519)
.+++....-+..+... ++..+ +.+|.|.+.-.=|.+. .. . .++.+++=+|.|+.-..+..+|++.
T Consensus 78 ~igig~pG~v~~~~~~~----l~~~~~~~~pv~v~NDa~aaa~g---e~---~--~~~~v~v~~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 78 AIGLGLSGVHNRQWAGE----FESQAPGFARLSLATDGYTTLLG---AH---G--GQPGIIVALGTGSIGEALYPDGSHR 145 (305)
T ss_dssp EEEEEESCCCTTSHHHH----HHHTCCCCSEEEEECHHHHHHHH---HT---T--TSSEEEEEESSSEEEEEECTTSCEE
T ss_pred eEEEEecCCCchHHHHH----HHHhCCCCceEEEECCHHHHHHh---hc---C--CCCeEEEEecCCeEEEEEeCCCcEE
Confidence 5778887765554432 55567 7899998866655443 21 1 2357888899998655544466654
No 48
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=93.42 E-value=0.07 Score=54.11 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=45.1
Q ss_pred ceEeeChHHHHHHHHhhhhccCC----CCCCceEEEEECCCceEEEEeeCCeEe--eeeeeehhHHHHHHhh
Q 010059 117 EVDVLTGEQEAKFVYMGVLQFLP----VFDRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (519)
Q Consensus 117 ~i~iIsg~eEA~l~~~gv~~~~~----~~~~~~lv~DIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (519)
+|.|+...-=|.+.+. . ...+ ......+|+|||||+|+++++.++.+. .+.|+++|.-.+.+..
T Consensus 156 ~V~v~pE~~~a~~~~~-~-~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i 225 (355)
T 3js6_A 156 GVKIVAQPMGTLLDLN-M-ENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRI 225 (355)
T ss_dssp EEEEEEHHHHHHHHTT-E-ETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EEEEEeCcHHHHHHHH-H-ccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHH
Confidence 5667765555555432 1 1111 024568999999999999999999887 5678999999888754
No 49
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=93.25 E-value=0.48 Score=51.42 Aligned_cols=110 Identities=18% Similarity=0.253 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCce-EeeChHHHHHHHHhhhhccCCCCCCce
Q 010059 68 SVESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLV 145 (519)
Q Consensus 68 ~~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i-~iIsg~eEA~l~~~gv~~~~~~~~~~~ 145 (519)
....|+.+++.++.+ |.+.. .+|-|--.---......+..+-+..|+++ ++|+...-|-+.| |.... ..+...
T Consensus 116 ~a~iL~~lk~~ae~~lg~~v~--~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlay-gl~~~--~~~~~v 190 (605)
T 4b9q_A 116 SAEVLKKMKKTAEDYLGEPVT--EAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTI 190 (605)
T ss_dssp HHHHHHHHHHHHHHHHTSCCC--EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHH-HTTSC--CSSEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCC--eEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHh-hhhcc--CCCCEE
Confidence 345567777777666 55432 23333111111122334555556689986 5677666665554 44322 124568
Q ss_pred EEEEECCCceEEEEeeCCe---------EeeeeeeehhHHHHHHhh
Q 010059 146 LSVDIGGGSTEFVIGKRGK---------VVFCESVNLGHVSLSEKF 182 (519)
Q Consensus 146 lv~DIGGGStEl~~~~~~~---------~~~~~SlplG~vrl~e~f 182 (519)
+|+|+|||++.+++++-+. +-.....++|.-.+.+.+
T Consensus 191 lV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l 236 (605)
T 4b9q_A 191 AVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp EEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHH
Confidence 9999999999999876433 112334678887776643
No 50
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A
Probab=92.49 E-value=0.15 Score=49.49 Aligned_cols=89 Identities=13% Similarity=0.004 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHH--------HhcccccchhhhhhcccCcchHHHHHHHHHhhhhcccc----CC-----------
Q 010059 361 KAGAQCASIAKDIFEGL--------RKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----SK----------- 417 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l--------~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I----~~----------- 417 (519)
.|..-|+..|..|++.. ....+++ ++..+.++.++|.|||||++- .+
T Consensus 28 ~HllDvAava~~L~~~~~~~~r~~la~~~g~~----------~~~~~~~~~~~~~lHDiGK~~~~fq~~~~~~~~~l~~~ 97 (265)
T 3sk9_A 28 AHMLDTAAVALAVLRMEPPRTRALYAEDWGLP----------EEGALAWAAALVGLHDLGKASPVFQAGWEEGKERVQRA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHTSC----------HHHHHHHHHHHHTTTTGGGCSGGGCC------------
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCC----------HHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhc
Confidence 68888888888887763 2222321 112467888999999999971 11
Q ss_pred ----------CchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCC
Q 010059 418 ----------KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRS 459 (519)
Q Consensus 418 ----------~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~ 459 (519)
..|..-|++++.+--.=.|++.+....++.++..|.+..|+.
T Consensus 98 g~~~~~~~~~~~Ha~aGa~ll~~~L~~~g~~~~~~~~ia~~I~gHHG~~p~~ 149 (265)
T 3sk9_A 98 GLPFGELLDWVAHGVFTELFLRRLLKEKGLPERAANDLAAALGAHHGFPANA 149 (265)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTSTTTTSCCCH
T ss_pred cCCccccCCCCChHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCCCCc
Confidence 245556667664320003888888889999888888877763
No 51
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=92.43 E-value=1.1 Score=49.40 Aligned_cols=112 Identities=17% Similarity=0.226 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCce-EeeChHHHHHHHHhhhhc-cCC---CC
Q 010059 68 SVESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQ-FLP---VF 141 (519)
Q Consensus 68 ~~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i-~iIsg~eEA~l~~~gv~~-~~~---~~ 141 (519)
....|+..++.++.+ |-+.. .+|-|--.---......+..+-+..|+++ ++|+...=|-+.| |... .++ ..
T Consensus 119 ~a~~L~~lk~~ae~~lg~~v~--~~VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlay-gl~~~~~~~~~~~ 195 (675)
T 3d2f_A 119 AAMFIDKVKDTVKQDTKANIT--DVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSY-GIFKTDLPEGEEK 195 (675)
T ss_dssp HHHHHHHHHHHHHHHHCSCCC--EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHH-HHHCSCCCCSSSC
T ss_pred HHHHHHHHHHHHHHHhCCCcc--eEEEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHH-hhhccccccccCC
Confidence 345566666665544 43322 23333111111122333444455679986 5666555555555 5433 222 12
Q ss_pred CCceEEEEECCCceEEEEee--CCeE-ee--eeeeehhHHHHHHhh
Q 010059 142 DRLVLSVDIGGGSTEFVIGK--RGKV-VF--CESVNLGHVSLSEKF 182 (519)
Q Consensus 142 ~~~~lv~DIGGGStEl~~~~--~~~~-~~--~~SlplG~vrl~e~f 182 (519)
+...+|+|+|||+|.++++. +|.+ +. ....++|.-.+.+.+
T Consensus 196 ~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 196 PRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred CcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 35689999999999999886 6665 22 234789987776643
No 52
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=92.18 E-value=0.39 Score=46.71 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcccc------------C---------CCc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT------------S---------KKG 419 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I------------~---------~~~ 419 (519)
.|+..|+.+|..|-..+....++ +..+...+..|++|||||+.. . ...
T Consensus 120 ~hs~~vA~~a~~la~~~~~~~~~-----------~~~~~~~~~laGLLHdiGkl~l~~~~~~~~~~l~~~~~~~~~~~~~ 188 (281)
T 3i7a_A 120 RTSIDVTAAACSLLQIYNKKHPG-----------SGLNYDTLTLAGLVHNIGALPVLTEAEAHPEMFTTIEHLRSLVRKM 188 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTT-----------CCCCHHHHHHHHHHTTTTHHHHHHHHHHCGGGCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcccc-----------CCCCHHHHHHHHHHHHCCHHHHHHhHHhhHHHhcChHHHHHHHhCc
Confidence 69999999998876665433331 122345688999999999853 1 124
Q ss_pred hhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcchhhccCChHHHHHHHHHHHHHHhhHHhccc
Q 010059 420 YHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQN 491 (519)
Q Consensus 420 h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k~~~~~~~~~~~~L~~~~~~~v~~L~aiLRlA~~Ld~s 491 (519)
|..-+++++.+-+ |. ..+..+++||........ ...++.++++|+.+...
T Consensus 189 H~~iGa~ll~~w~----lp----~~i~~ai~~Hh~~~~~~~--------------~~~~~~iV~lAd~~~~~ 238 (281)
T 3i7a_A 189 QGPIGRAVLKSWD----FA----PEVMEVVERWADLPYLGD--------------HVSYLDFIRAAAFYTGE 238 (281)
T ss_dssp HHHHHHHHHHHTT----CC----HHHHHHHHHTTCTTCCCS--------------SCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHCC----CC----HHHHHHHHHHcChhhcCC--------------cCCHHHHHHHHHHHcCC
Confidence 7777888887653 43 245566677764322100 01255688888887643
No 53
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=91.72 E-value=1.9 Score=41.30 Aligned_cols=113 Identities=16% Similarity=0.210 Sum_probs=61.7
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE-
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV- 92 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~v- 92 (519)
++.-||+||-++..+|.+ +++. ++.+...+ . |.- +|. +.++|++.. ++.+....++..+
T Consensus 2 ~~lGID~GsT~tk~av~d--~~~~--il~~~~~~----~-----g~~-~e~---a~~vl~~~~---~~a~~~~~~~~~~a 61 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILK--NGED--IVASETIS----S-----GTG-TTG---PSRVLEKLY---GKTGLAREDIKKVV 61 (276)
T ss_dssp EEEEEEECSSCEEEEEEE--TTTE--EEEEEEES----C-----CTT-SSH---HHHHHHHHH---HHHCCCGGGEEEEE
T ss_pred eEEEEEcCccEEEEEEEE--CCCe--EEEEEEec----C-----CCC-HHH---HHHHHHHHH---HHCCCcchhccccc
Confidence 367899999999988874 3443 34332211 1 211 122 223444433 3345554455444
Q ss_pred EehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEee-CCeE
Q 010059 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK-RGKV 165 (519)
Q Consensus 93 ATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~-~~~~ 165 (519)
.|.+-+.| .+.++..|+--+ |. .+|+....+ ....++|+|||.+.++... +|.+
T Consensus 62 ~t~~~~~a-------------~~~~~~~Vne~~-ah--a~a~~~~~~---~~~~vl~lgG~~~~~~~~~~~g~~ 116 (276)
T 4ehu_A 62 VTGYGRMN-------------YSDADKQISELS-CH--ARGVNFIIP---ETRTIIDIGGQDAKVLKLDNNGRL 116 (276)
T ss_dssp EESTTGGG-------------CCSCSEECCHHH-HH--HHHHHHHST---TCCEEEEECSSCEEEEEECTTSCE
T ss_pred cCchHHHH-------------hhCCCcccchHH-HH--HHHHHHhCC---CCCeEEEEcCCCceEEEEEecCce
Confidence 46666654 345567776433 43 233333232 2248999999999988774 4544
No 54
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=91.60 E-value=0.11 Score=53.40 Aligned_cols=92 Identities=16% Similarity=0.174 Sum_probs=33.2
Q ss_pred CCCCccEEEEEehh-hhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEee
Q 010059 83 NISRDHTRAVATAA-VRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (519)
Q Consensus 83 ~v~~~~i~~vATsA-~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~ 161 (519)
++++.+..++-|.. .-...|++.+.+.+.+..|++. +.=-.|+-++.+|.- ...++|+|+|+|.|.++.+.
T Consensus 99 ~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~--~~~~~~~~~a~~a~g------~~~~lVVDiG~g~T~v~pv~ 170 (394)
T 1k8k_B 99 NIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSG--VYVAIQAVLTLYAQG------LLTGVVVDSGDGVTHICPVY 170 (394)
T ss_dssp ---------------------------------------------------------------CCEEEECSSCEEEECEE
T ss_pred CcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCe--EEEEhhHHHHHHhCC------CceEEEEEcCCCceEeeeeE
Confidence 44333334455543 3334566667777767666553 222344444444321 23479999999999999999
Q ss_pred CCeEee--eeeeehhHHHHHHhh
Q 010059 162 RGKVVF--CESVNLGHVSLSEKF 182 (519)
Q Consensus 162 ~~~~~~--~~SlplG~vrl~e~f 182 (519)
+|.+.. ..++|+|.-.+++.+
T Consensus 171 ~G~~~~~~~~~~~~GG~~lt~~l 193 (394)
T 1k8k_B 171 EGFSLPHLTRRLDIAGRDITRYL 193 (394)
T ss_dssp TTEECSTTCEEESCCHHHHHHHH
T ss_pred CCEEcccceEEeeccHHHHHHHH
Confidence 998876 478999998887754
No 55
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=91.36 E-value=0.82 Score=49.61 Aligned_cols=109 Identities=17% Similarity=0.243 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceE-eeChHHHHHHHHhhhhccCCCCCCceE
Q 010059 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (519)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~-iIsg~eEA~l~~~gv~~~~~~~~~~~l 146 (519)
...|+..++.++.+ |.+..+ +|-|--.---......+..+-+..|+++. +|+...=|-+.| |.... ..+...+
T Consensus 117 a~~L~~l~~~ae~~l~~~v~~--~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay-~l~~~--~~~~~vl 191 (605)
T 2kho_A 117 AEVLKKMKKTAEDYLGEPVTE--AVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTIA 191 (605)
T ss_dssp HHHHHHHHHHHHHHHCSCCCE--EEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHT-TTTSS--SSEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCcE--EEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHh-hhccc--CCCCEEE
Confidence 44566666666654 433222 23332111111223334444556799864 565555554544 43221 1245689
Q ss_pred EEEECCCceEEEEee------CCeEe---eeeeeehhHHHHHHhh
Q 010059 147 SVDIGGGSTEFVIGK------RGKVV---FCESVNLGHVSLSEKF 182 (519)
Q Consensus 147 v~DIGGGStEl~~~~------~~~~~---~~~SlplG~vrl~e~f 182 (519)
|+|+|||+|.+++++ +|.+. .....++|.-.+.+.+
T Consensus 192 V~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l 236 (605)
T 2kho_A 192 VYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp EEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHH
T ss_pred EEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHH
Confidence 999999999999887 34332 2445688876665543
No 56
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=91.23 E-value=2.2 Score=42.36 Aligned_cols=140 Identities=13% Similarity=0.132 Sum_probs=84.0
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCc-c--EE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD-H--TR 90 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~-~--i~ 90 (519)
++..||+|..+++..+++. +|. ++.+.+.+. ...... =.++.++.+.++++++.+. .+++.. + -.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~~---~~~~~~--~~~~~~~~i~~~i~~~~~~---~~~~~~~~i~gi 74 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSE--DGK--ILAEADGLS---TNHWLI--GTDKCVERINEMVNRAKRK---AGVDPLVPLRSL 74 (347)
T ss_dssp EEEEEEECTTCEEEEEEET--TSC--EEEEEEECC---CCHHHH--CHHHHHHHHHHHHHHHHHH---HTCCTTCCBSEE
T ss_pred EEEEEEcCccceEEEEEeC--CCC--EEEEEeCCC---CCcccC--CHHHHHHHHHHHHHHHHHh---cCCCcccceeEE
Confidence 6789999999999999975 354 333332210 000000 0245567777777766543 344322 2 35
Q ss_pred EEEehhhhhcCChHHHHHHHHHHhC---CceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEee
Q 010059 91 AVATAAVRAAENKDEFVECVREKVG---FEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (519)
Q Consensus 91 ~vATsA~R~A~N~~~f~~~i~~~tG---~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~ 167 (519)
++|....-+..+...+.+.+++.+| .+|.+.+.-.=|-+.+ +. ++++++=+|.|+--..+..+|....
T Consensus 75 gi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~------~~---~~~v~v~~GTGig~~~v~~~G~~c~ 145 (347)
T 2ch5_A 75 GLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA------TP---DGGVVLISGTGSNCRLINPDGSESG 145 (347)
T ss_dssp EEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH------CS---SCEEEEEESSSEEEEEECTTSCEEE
T ss_pred EEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh------CC---CCcEEEEEcCCceeEEEcCCCCEEe
Confidence 6777776554445577788888897 8999988665555542 11 3478888899987766554565433
Q ss_pred eeeeehhHH
Q 010059 168 CESVNLGHV 176 (519)
Q Consensus 168 ~~SlplG~v 176 (519)
. =..||+
T Consensus 146 c--G~~G~l 152 (347)
T 2ch5_A 146 C--GGWGHM 152 (347)
T ss_dssp E--ECCCTT
T ss_pred c--CCcCcc
Confidence 2 234554
No 57
>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=90.96 E-value=0.51 Score=46.25 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcccc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I 415 (519)
.|+..|+.+|..+-..+ ...+...+..|++|||||+.+
T Consensus 127 ~hs~~va~~a~~la~~~-----------------~~~~~e~a~~aGLLHDIGkl~ 164 (297)
T 1vqr_A 127 KTCNEEATFIANWLNDE-----------------DKKLSHLLVPCAMLLRLGIVI 164 (297)
T ss_dssp HHHHHHHHHHHHHHTTT-----------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc-----------------cCCCHHHHHHHHHHHHccHHH
Confidence 68888888888664321 112456688999999999876
No 58
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus}
Probab=90.40 E-value=0.7 Score=46.97 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccc---------c-------CCCchhhhh
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF---------T-------SKKGYHKQS 424 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~---------I-------~~~~h~~Hs 424 (519)
+|+--|+.+|..|...|. ++ ..++++||+|||||.. + .-..|..+|
T Consensus 78 ~HSl~Va~iar~ia~~l~---------------l~---~~l~~~a~LlHDiGh~PFgH~~E~~l~~~~~~~ggf~Hn~~s 139 (376)
T 2dqb_A 78 THTLEVAQVSRSIARALG---------------LN---EDLTEAIALSHDLGHPPFGHTGEHVLNALMQDHGGFEHNAQA 139 (376)
T ss_dssp HHHHHHHHHHHHHHHHTT---------------CC---HHHHHHHHHHTTTTCCSSTTHHHHHHHHHTTTTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC---------------CC---HHHHHHHHHHHhcCCCccccchHHHHHHHhhccCCCcHHHHH
Confidence 799999999998876542 22 3689999999999975 2 224688888
Q ss_pred HHHHHcCCC----CCCCCHHHHHHHHHHHHhccC
Q 010059 425 CHIIMNGDH----LYGYSTDEIKLIALLTRFHRK 454 (519)
Q Consensus 425 ~yiI~ns~~----l~G~s~~E~~~iA~iaryh~k 454 (519)
+.++..-+. ..|++-. ...+..|..|+..
T Consensus 140 ~ril~~le~~~~~~~glnLt-~~~l~~I~kh~~~ 172 (376)
T 2dqb_A 140 LRILTHLEVRYPGFRGLNLT-YEVLEGIATHEAA 172 (376)
T ss_dssp HHHHHTTCBCBTTBSBCCCC-HHHHHHHHHSCC-
T ss_pred HHHHHHHhhccccccCCCCC-HHHHHHHHhCCCc
Confidence 888876320 1233221 2345556666653
No 59
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.11 E-value=1.1 Score=46.56 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=67.4
Q ss_pred HcCCCCccEEEEEehhhhh-cCChHHHHHHHHHHhCCc-eEeeChHHHHHHHHhhhhccCCCC--CCceEEEEECCCceE
Q 010059 81 SHNISRDHTRAVATAAVRA-AENKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGVLQFLPVF--DRLVLSVDIGGGSTE 156 (519)
Q Consensus 81 ~~~v~~~~i~~vATsA~R~-A~N~~~f~~~i~~~tG~~-i~iIsg~eEA~l~~~gv~~~~~~~--~~~~lv~DIGGGStE 156 (519)
..++++.+-.++-|.+.-. ..|++...+.+.+..|.+ +-++ .++-++.+|.-...... ...++|+|+|+|.|+
T Consensus 116 ~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~---~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~ 192 (427)
T 3dwl_A 116 YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIA---VQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192 (427)
T ss_dssp TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEE---EHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEE
T ss_pred hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeec---chHHHHHHhcCCcccccCCCceEEEEECCCCceE
Confidence 3567655556677765432 245666777776777877 3444 45666666543211111 235899999999999
Q ss_pred EEEeeCCeEee--eeeeehhHHHHHHhhc
Q 010059 157 FVIGKRGKVVF--CESVNLGHVSLSEKFG 183 (519)
Q Consensus 157 l~~~~~~~~~~--~~SlplG~vrl~e~f~ 183 (519)
++.+.+|.+.. ..++++|.-.+++.+.
T Consensus 193 v~PV~~G~~l~~~~~rl~~gG~~lt~~L~ 221 (427)
T 3dwl_A 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFVQ 221 (427)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred EEEEECCEEehhhheeccccHHHHHHHHH
Confidence 99999998886 5789999999988653
No 60
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=90.10 E-value=2.6 Score=45.24 Aligned_cols=110 Identities=18% Similarity=0.175 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHH-HH-HHcCCCCcc---EEEEEe-hhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccC
Q 010059 65 QARSVESLLMFRD-II-QSHNISRDH---TRAVAT-AAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFL 138 (519)
Q Consensus 65 i~~~~~~L~~f~~-~~-~~~~v~~~~---i~~vAT-sA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~ 138 (519)
+....+.+..+.+ .. +..++++.+ ..++=| ..+-.-+|++.+++-+.+..|++-=-+. .++-++.+|.-
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~--~~~vla~ya~G--- 244 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVH--QESVCATYGSG--- 244 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEE--EHHHHHHHHHT---
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEee--chHHHHHHHCC---
Confidence 3444455554433 22 456776544 334544 4445556788899999998888743333 35566665532
Q ss_pred CCCCCceEEEEECCCceEEEEeeCCeEe--eeeeeehhHHHHHHhh
Q 010059 139 PVFDRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (519)
Q Consensus 139 ~~~~~~~lv~DIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (519)
...++|||+|-+.|-++-+.+|.++ ....+++|.-.+++.+
T Consensus 245 ---~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L 287 (593)
T 4fo0_A 245 ---LSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCF 287 (593)
T ss_dssp ---CSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHH
T ss_pred ---CCceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHH
Confidence 2348999999999999999999876 4578899998888864
No 61
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=89.89 E-value=8.1 Score=37.61 Aligned_cols=128 Identities=13% Similarity=0.080 Sum_probs=71.4
Q ss_pred CCceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE
Q 010059 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (519)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~ 90 (519)
++.....|||||.++++++. + ++.+ ++. + +. .+.++++++.| +.-.+ ..
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~--~-~~~i--~~~-~---------~~-----~~~~~~~l~~l-------~~~~~----~~ 66 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQE--Q-DNQR--TFK-T---------EL-----TKNIDQVVEWL-------NQQQI----EK 66 (287)
T ss_dssp ---CEEEEEECSSEEEEEEE--C-SSCE--EEE-E---------EE-----GGGHHHHHHHH-------HTSCC----SE
T ss_pred CCCeEEEEEEChhhEEEEEE--c-CCEE--EEE-E---------ec-----hHHHHHHHHHh-------cccCc----eE
Confidence 34467899999999999997 3 3432 222 1 11 11244443333 21122 24
Q ss_pred EEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCC---CCCceEEEEECCCceEEEEeeCCeEee
Q 010059 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV---FDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (519)
Q Consensus 91 ~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~---~~~~~lv~DIGGGStEl~~~~~~~~~~ 167 (519)
+++|--=|. .++. ..|++...++ |-.-...|+..-.+. .-.+.+++|||||-. ++.++++....
T Consensus 67 i~~TG~G~~------~~~~---~l~~~~~~v~---Ei~~~~~Ga~~l~~~~~~~~~~~~vIdIGg~ds-ii~v~~~~f~r 133 (287)
T 2ews_A 67 LCLTGGNAG------VIAE---NINIPAQIFV---EFDAASQGLGILLKEQGHDLADYIFANVGTGTS-LHYFDGQSQRR 133 (287)
T ss_dssp EEEESTTHH------HHHT---TSSSCCEECC---HHHHHHHHHHHHHHHTTCCCSCEEEEEESSSEE-EEEECSSCEEE
T ss_pred EEEEChhHH------hHhH---hhCCCcceee---hhHHHHHHHHHhcccCCCCcCCeEEEEeCCCeE-EEEEcCCceEE
Confidence 577754332 1111 4677766644 333333444432221 012469999999988 99998776666
Q ss_pred eeeeehhHHHHHHhh
Q 010059 168 CESVNLGHVSLSEKF 182 (519)
Q Consensus 168 ~~SlplG~vrl~e~f 182 (519)
.---..|.=++.+..
T Consensus 134 ~~g~aaGgGtFl~l~ 148 (287)
T 2ews_A 134 VGGIGTGGGMIQGLG 148 (287)
T ss_dssp EEEESCSHHHHHHHH
T ss_pred cCccccchhhHHHHH
Confidence 666678888777754
No 62
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=89.63 E-value=0.33 Score=52.62 Aligned_cols=158 Identities=16% Similarity=0.224 Sum_probs=85.9
Q ss_pred EEEEecccceeeeEEEEeCCCCE-EEEEeeeeeeeccCCCCcC------CCCCHHHHHH-HHHHHHH-HHHHHHHcCCCC
Q 010059 16 ASIDMGTSSFKLLIIRAYPNGKF-LTIDTLKQPVILGRDLSSS------CSISTQSQAR-SVESLLM-FRDIIQSHNISR 86 (519)
Q Consensus 16 AvIDIGSNsirL~I~~~~~~~~~-~~i~~~k~~vrLg~~~~~~------g~ls~e~i~~-~~~~L~~-f~~~~~~~~v~~ 86 (519)
.+|||||.++....++.. +|.. ...-..+-.++.|+++-.. +.=..+.+.+ ++++|++ +.+++++.++++
T Consensus 209 lAvDiGTTtv~~~LvdL~-tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~i~~ 287 (631)
T 3zyy_X 209 LAIDIGTTTVVVQLVDLV-SGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHGVEK 287 (631)
T ss_dssp EEEEECSSEEEEEEEETT-TCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred EEEEecccceeEEEEECC-CCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 589999999999999986 4553 3334455567888887531 1101122222 4455554 455667778887
Q ss_pred ccEEE---EEehhh------------hhcCChHHHHHHH---HHHhCCc------eEee---ChHHHHHHHHhhhhccCC
Q 010059 87 DHTRA---VATAAV------------RAAENKDEFVECV---REKVGFE------VDVL---TGEQEAKFVYMGVLQFLP 139 (519)
Q Consensus 87 ~~i~~---vATsA~------------R~A~N~~~f~~~i---~~~tG~~------i~iI---sg~eEA~l~~~gv~~~~~ 139 (519)
++|.. +|-.+| +.|+=...|.+.. ..++|++ |.++ ++.-=|-...--+...+.
T Consensus 288 ~~I~~~~v~GNt~M~hLllgi~p~~L~~~Py~p~~~~~~~~~a~~lgl~~~p~~~v~~lP~i~~~VGaDi~Ag~la~~~~ 367 (631)
T 3zyy_X 288 KEIMAAVVAGNTTMTHLFLEIDPRYIRLEPYTPAALFIPPVPATEAKIEMNPKGFVYIMPNVASYVGGDITSGVLYTGLA 367 (631)
T ss_dssp GGEEEEEEEECHHHHHHHHTCCCGGGSSTTTCCSCSCCCCEEHHHHTCSSCTTSEEEECCCCBTTBCHHHHHHHHHHTTT
T ss_pred HHeeEEEEEccHHHHHHHcCCChHHhccCCcccccCCCceecHHHcCCCcCCCCEEEEcCcccccccHHHHHHHHhcCcc
Confidence 66543 333222 2221111110000 1234654 3332 322212111111112233
Q ss_pred CCCCceEEEEECCCceEEEEeeCCeEeeeeeeehhHH
Q 010059 140 VFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHV 176 (519)
Q Consensus 140 ~~~~~~lv~DIGGGStEl~~~~~~~~~~~~SlplG~v 176 (519)
..++..|++|||. +.|+++++++++ .+.|-+-|+.
T Consensus 368 ~~~~~~L~iDiGT-NgEivL~~~~~l-~~~S~aAGPA 402 (631)
T 3zyy_X 368 NSDEITLFIDIGT-NGEMVLGNKDWL-VTCACSAGPA 402 (631)
T ss_dssp SCSSCEEEEECSS-EEEEEEECSSCE-EEEEEECCGG
T ss_pred cCCCCEEEEEcCC-CeEEEEeeCCEE-EEEeccCchh
Confidence 3446789999987 689999987765 5778999985
No 63
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=89.28 E-value=6.8 Score=39.47 Aligned_cols=134 Identities=14% Similarity=0.084 Sum_probs=82.4
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHH--cCCCCccEE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQS--HNISRDHTR 90 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~--~~v~~~~i~ 90 (519)
..+..||||..++++.+++.+ |. ++.+.+.++... .=.++.++.+.++++++.+.... ..+ .-.
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~--G~--vl~~~~~~~~~~-------~~~~~~~~~l~~~i~~~~~~~~~~~~~i---~gi 152 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDAS--MN--ILAHEAHPLPSQ-------SDREETLNVMYRIIDRAKDMMEKLGSKL---SAL 152 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETT--CC--EEEEEEEECCSS-------CCHHHHHHHHHHHHHHHHHHHHHTTCCC---CEE
T ss_pred CeEEEEEECCCEEEEEEECCC--CC--EEEEEEEccCCC-------CCHHHHHHHHHHHHHHHHHhcCCCcCcE---EEE
Confidence 467899999999999999763 54 344433332110 01356677777888777654422 122 134
Q ss_pred EEEehhhhhc--------CC----hHHHHHHHHHHhCCceEeeChHHHHHHHH--hhhhccCCCCCCceEEEEECCCceE
Q 010059 91 AVATAAVRAA--------EN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (519)
Q Consensus 91 ~vATsA~R~A--------~N----~~~f~~~i~~~tG~~i~iIsg~eEA~l~~--~gv~~~~~~~~~~~lv~DIGGGStE 156 (519)
++|....-+. .| .-.+.+.+++++|++|.+.+.-.=|-+.- +|... ++.+++-+|.| +-
T Consensus 153 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~~------~~~v~l~~GtG-iG 225 (380)
T 2hoe_A 153 TVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKWYTKRD------DSFAWILTGKG-IG 225 (380)
T ss_dssp EEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHHHHHTTCC------SCEEEEEESSS-CE
T ss_pred EEEeeccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHHHHHhCCCC------CcEEEEEeCCc-eE
Confidence 5666554332 22 13567888889999999988765554442 22211 45899999988 55
Q ss_pred EEEeeCCeEee
Q 010059 157 FVIGKRGKVVF 167 (519)
Q Consensus 157 l~~~~~~~~~~ 167 (519)
..++-+|++..
T Consensus 226 ~giv~~G~l~~ 236 (380)
T 2hoe_A 226 AGIIIDGELYR 236 (380)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEec
Confidence 66666777654
No 64
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=86.48 E-value=1.7 Score=46.10 Aligned_cols=77 Identities=14% Similarity=0.236 Sum_probs=46.2
Q ss_pred CceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCC--CCHHHH-HHHHHHHHHHHHHHHHcCCCCcc
Q 010059 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQSQ-ARSVESLLMFRDIIQSHNISRDH 88 (519)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~e~i-~~~~~~L~~f~~~~~~~~v~~~~ 88 (519)
++++..||+||.|+|.++++ .+|+. +.....+... .....|. -+++.+ +.++++++ +.+++.++++.+
T Consensus 3 kkYvlgID~GTss~Ka~l~d--~~G~~--va~~~~~~~~--~~p~~G~~Eqdp~~~w~~~~~~i~---~~l~~~~~~~~~ 73 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMD--HDANI--ISVSQREFEQ--IYPKPGWVEHDPMEIWATQSSTLV---EVLAKADISSDQ 73 (526)
T ss_dssp CCEEEEEEECSSEEEEEEEC--TTCCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHHHHTCCGGG
T ss_pred ceEEEEEEccccceeeeEEc--CCCCE--EEEEEEecCc--ccCCCCcEEECHHHHHHHHHHHHH---HHHHHcCCChhh
Confidence 46789999999999999985 35654 3333332221 1122232 244443 44455554 455666888788
Q ss_pred EEEEEehhh
Q 010059 89 TRAVATAAV 97 (519)
Q Consensus 89 i~~vATsA~ 97 (519)
|.+++-++.
T Consensus 74 I~aIgis~q 82 (526)
T 3ezw_A 74 IAAIGITNQ 82 (526)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999885443
No 65
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=86.09 E-value=2.6 Score=44.65 Aligned_cols=76 Identities=16% Similarity=0.180 Sum_probs=43.8
Q ss_pred CceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHcCCCCcc
Q 010059 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSHNISRDH 88 (519)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~-e~i~~~~~~L~~f~~~~~~~~v~~~~ 88 (519)
.+++..||+|+.|+|..+++. +|.+ +...+.+... .....|. -.+ +-.+.+++++++ ++++.++++.+
T Consensus 25 ~~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~--~~p~~g~~e~dp~~~~~~i~~~i~~---~~~~~~~~~~~ 95 (520)
T 4e1j_A 25 GGYILAIDQGTTSTRAIVFDG--NQKI--AGVGQKEFKQ--HFPKSGWVEHDPEEIWQTVVSTVKE---AIEKSGITAND 95 (520)
T ss_dssp SCEEEEEEECSSEEEEEEECT--TSCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHHH---HHHTTTCCGGG
T ss_pred hCeEEEEEeCCcceEEEEECC--CCCE--EEEEEEeccc--ccCCCCcEEECHHHHHHHHHHHHHH---HHHhcCCCccc
Confidence 457899999999999999964 4553 4333333221 1111222 233 334444555544 45556776667
Q ss_pred EEEEEehh
Q 010059 89 TRAVATAA 96 (519)
Q Consensus 89 i~~vATsA 96 (519)
|.+|+-++
T Consensus 96 I~~Igis~ 103 (520)
T 4e1j_A 96 IAAIGITN 103 (520)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeC
Confidence 88877444
No 66
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=85.38 E-value=4.2 Score=39.94 Aligned_cols=135 Identities=14% Similarity=0.141 Sum_probs=84.7
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~v 92 (519)
..+..||||..++++.+++. +|. ++.+.+.++.-..+ .++.++.+.+.++++.+ ....+ .-.++
T Consensus 19 ~~~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~~~~~-------~~~~~~~i~~~i~~~~~--~~~~i---~gigi 82 (321)
T 3r8e_A 19 GMILGIDVGGTSVKFGLVTP--EGE--IQNATRFMTADWVN-------GIGFVESMKLEIGNFLK--QYPIV---KGVGI 82 (321)
T ss_dssp CCEEEEECCSSEEEEEEECT--TCC--EEEEEEEEHHHHHT-------TTCHHHHHHHHHHHHHH--HCTTC---CEEEE
T ss_pred cEEEEEEECCCEEEEEEEcC--CCc--EEEEEEEeCCCCCC-------HHHHHHHHHHHHHHHHh--ccCCe---eEEEE
Confidence 35789999999999999864 354 44444444321111 23456666677776654 22233 23456
Q ss_pred Eehhhhh--------cCC-----hHHHHHHHHHHh-CCceEeeChHHHHHHH--HhhhhccCCCCCCceEEEEECCCceE
Q 010059 93 ATAAVRA--------AEN-----KDEFVECVREKV-GFEVDVLTGEQEAKFV--YMGVLQFLPVFDRLVLSVDIGGGSTE 156 (519)
Q Consensus 93 ATsA~R~--------A~N-----~~~f~~~i~~~t-G~~i~iIsg~eEA~l~--~~gv~~~~~~~~~~~lv~DIGGGStE 156 (519)
|....-+ +.| .-.+.+.+++++ |++|.+.+.-.=+-+. ++|... ..++.+++-+|.| +-
T Consensus 83 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 157 (321)
T 3r8e_A 83 GWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYYFGENK----RMQTFILLALGTG-VG 157 (321)
T ss_dssp EESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCCCC----CCCcEEEEEECCc-eE
Confidence 6655433 222 245678889999 9999999876655554 223222 2345899999998 67
Q ss_pred EEEeeCCeEeee
Q 010059 157 FVIGKRGKVVFC 168 (519)
Q Consensus 157 l~~~~~~~~~~~ 168 (519)
..++.+|++...
T Consensus 158 ~gii~~G~l~~G 169 (321)
T 3r8e_A 158 SGVMMNGKLFIG 169 (321)
T ss_dssp EEEEETTEECCC
T ss_pred EEEEECCEEecC
Confidence 777778887653
No 67
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=85.33 E-value=15 Score=37.57 Aligned_cols=135 Identities=14% Similarity=0.085 Sum_probs=83.9
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE-
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA- 91 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~- 91 (519)
..+..||||..++++.+++.+ |. ++.+.+.++. . .+ .++.++.+.+++++|.+ +.+++..++.+
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~~--G~--il~~~~~~~~--~----~~--~~~~~~~l~~~i~~~~~---~~~~~~~~i~gi 172 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHELG--GE--VLIDTKIDIH--E----ID--QDDVLARLLFEIEEFFQ---TYAAQLDRVTSI 172 (429)
T ss_dssp EEEEEEEEETTEEEEEEEETT--SC--EEEEEEEECC--C----CB--HHHHHHHHHHHHHHHHH---HTTTTCCEEEEE
T ss_pred CEEEEEEECCCEEEEEEECCC--CC--EEEEEEEcCC--C----CC--HHHHHHHHHHHHHHHHH---hcCCCcCceEEE
Confidence 457899999999999999753 54 3444433321 1 11 35567777777776653 45554344543
Q ss_pred -EEehhhhh--------cCC----hHHHHHHHHHHhCCceEeeChHHHHHHHH--hhhhccCCCCCCceEEEEECCCceE
Q 010059 92 -VATAAVRA--------AEN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (519)
Q Consensus 92 -vATsA~R~--------A~N----~~~f~~~i~~~tG~~i~iIsg~eEA~l~~--~gv~~~~~~~~~~~lv~DIGGGStE 156 (519)
+|....-+ +.| .-.+.+.+++++|++|.+.+.-.=|-+.- +|... ..++.+++-+|.| +-
T Consensus 173 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 247 (429)
T 1z05_A 173 AITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQ----DVDNSVLISIHHG-LG 247 (429)
T ss_dssp EEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCc-EE
Confidence 44444322 222 13677888899999999988766555442 23221 2345899999988 55
Q ss_pred EEEeeCCeEee
Q 010059 157 FVIGKRGKVVF 167 (519)
Q Consensus 157 l~~~~~~~~~~ 167 (519)
..++-+|++..
T Consensus 248 ~giv~~G~l~~ 258 (429)
T 1z05_A 248 AGIVLDGRVLQ 258 (429)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEee
Confidence 66677787654
No 68
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei}
Probab=83.84 E-value=4.2 Score=42.35 Aligned_cols=42 Identities=21% Similarity=0.097 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccC
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS 416 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~ 416 (519)
.|+..|+.+|..|-..+ +.. ...+...+-.|++|||||+.+=
T Consensus 281 ~hs~~~A~~a~~LA~~~----~~~----------~~~~~~~aflaGLLhDIGkl~l 322 (457)
T 3mem_A 281 QQAIWQAQSAGILASMM----PRG----------QRPLFGLAYLAGLLHNFGHLVL 322 (457)
T ss_dssp HHHHHHHHHHHHHHHHS----CGG----------GCCCHHHHHHHHHHTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHhc----ccc----------cCCCHHHHHHHHHHHHhhHHHH
Confidence 78999999998665432 210 0123456889999999998774
No 69
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis}
Probab=83.41 E-value=1.2 Score=46.40 Aligned_cols=92 Identities=12% Similarity=0.157 Sum_probs=51.9
Q ss_pred hhHHHHHHHHHHHHHHHHhc-c-cccchhhhhhcccCcch-HHHHHHHHHhhhhccc--------------cC-------
Q 010059 361 KAGAQCASIAKDIFEGLRKC-D-KLYNNQVKLIASFEDKD-LEYLEAACLLHNIGHF--------------TS------- 416 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~-~-~l~~~~~~~~~~~~~~~-~~lL~~Aa~LhdiG~~--------------I~------- 416 (519)
+|+--|+.+|..+...|... . .+.. ......+.+++ ..++++||++||||.. -.
T Consensus 67 tHSL~V~~iar~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~lv~~a~L~HDiGH~PFgH~gE~~l~~~~~~~gg~~~~ 144 (444)
T 3bg2_A 67 THSLEVSVVGRSLGRMVGKKLLEKYPH--LEQVYGYKFNDFGAIVAAAALAHDIGNPPFGHSGEKAIGEFFKNGYGKRYK 144 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTH--HHHTTCCCHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHTSGGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc--cccccccchhhHHHHHHHHHHhcccCCCCccccHHHHHHHHHHhccccchh
Confidence 79999999988887776421 1 0000 00000012222 5799999999999953 12
Q ss_pred ------------CCchhhhhHHHHHcCCC--CCCCCHHHHHHHHHHHHhccCC
Q 010059 417 ------------KKGYHKQSCHIIMNGDH--LYGYSTDEIKLIALLTRFHRKK 455 (519)
Q Consensus 417 ------------~~~h~~Hs~yiI~ns~~--l~G~s~~E~~~iA~iaryh~k~ 455 (519)
.-.|..+|+-|+..-+. -.|++ --...++.++.|-...
T Consensus 145 ~~l~~~~~~D~~~Fehnaqs~Ril~~l~~~~~~GLn-LT~~tl~gilKyp~~~ 196 (444)
T 3bg2_A 145 DSLTAKEYQDLIKFEGNANGFKVLSQSKPGAQGGLR-LSYATLGAFMKYPKES 196 (444)
T ss_dssp GGSCHHHHHHHHTCCHHHHHHHHHHCCBTTBTTTTC-CCHHHHHHHCSSCBCC
T ss_pred hccchhhhccccCCchHHHHHHHHHHHhhccCCCcc-CCHHHHHHHHhCCcch
Confidence 24666777777755430 12443 2345666666675543
No 70
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=83.18 E-value=14 Score=37.36 Aligned_cols=135 Identities=12% Similarity=0.061 Sum_probs=82.1
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE-
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA- 91 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~- 91 (519)
..+..||||..++++.+++.+ |. ++.+.+.+. .. . =.++.++.+.++++.|.+ +.+++..++..
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~~--G~--il~~~~~~~--~~---~---~~~~~~~~l~~~i~~~~~---~~~~~~~~i~gi 149 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDLS--SK--LVVEESQEL--AL---K---DDLPLLDRIISHIDQFFI---RHQKKLERLTSI 149 (406)
T ss_dssp CEEEEEEEETTEEEEEEEETT--CC--EEEEEEEEC--CS---S---CSSCHHHHHHHHHHHHHH---HTGGGCCCEEEE
T ss_pred cEEEEEEEcCCEEEEEEEcCC--CC--EEEEEEecC--CC---C---CHHHHHHHHHHHHHHHHH---hcCCCcCceeEE
Confidence 467899999999999999753 54 344444433 11 1 124556777777777654 33433234443
Q ss_pred -EEehhhh--------hcCCh-----HHHHHHHHHHhCCceEeeChHHHHHHHH--hhhhccCCCCCCceEEEEECCCce
Q 010059 92 -VATAAVR--------AAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGST 155 (519)
Q Consensus 92 -vATsA~R--------~A~N~-----~~f~~~i~~~tG~~i~iIsg~eEA~l~~--~gv~~~~~~~~~~~lv~DIGGGSt 155 (519)
+|....- .+.|- -.+.+.+++++|++|.+.+.-.=|-+.- +|... ..++.+++-+|.| +
T Consensus 150 gi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-i 224 (406)
T 1z6r_A 150 AITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASR----GARDVIQVVIDHN-V 224 (406)
T ss_dssp EEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-E
T ss_pred EEEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhcCCC----CCCcEEEEEECCc-E
Confidence 4444331 12332 3567888899999999988655444442 22211 2345899999998 5
Q ss_pred EEEEeeCCeEee
Q 010059 156 EFVIGKRGKVVF 167 (519)
Q Consensus 156 El~~~~~~~~~~ 167 (519)
-..++.+|++..
T Consensus 225 G~giv~~G~l~~ 236 (406)
T 1z6r_A 225 GAGVITDGHLLH 236 (406)
T ss_dssp EEEEEETTEETT
T ss_pred EEEEEECCEEee
Confidence 666777887754
No 71
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=82.84 E-value=7.4 Score=38.13 Aligned_cols=131 Identities=17% Similarity=0.201 Sum_probs=80.6
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (519)
++..||||..++++.+++. +|. ++.+.+.++ . .+ .++.++.+.+.++++.+ .+.+ .-.+++
T Consensus 3 ~~lgiDiGgt~i~~~l~d~--~G~--i~~~~~~~~------~-~~--~~~~~~~i~~~i~~~~~---~~~i---~gigi~ 63 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDE--EGR--ILSTFKVAT------P-PT--AEGIVDAICAAVAGASE---GHDV---EAVGIG 63 (321)
T ss_dssp EEEEEEECSSEEEEEEECT--TCC--BCCCEEEEC------C-SS--HHHHHHHHHHHHHHHHT---TCCE---EEEEEE
T ss_pred EEEEEEECCCEEEEEEECC--CCC--EEEEEEeeC------C-CC--HHHHHHHHHHHHHHHHh---hcCc---eEEEEe
Confidence 5789999999999999864 344 333333333 1 11 24455555556655532 2222 233455
Q ss_pred ehhhhhc--------CC----hHHHHHHHHHHhCCceEeeChHHHHHHHHh--hhhccCCCCCCceEEEEECCCceEEEE
Q 010059 94 TAAVRAA--------EN----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFVI 159 (519)
Q Consensus 94 TsA~R~A--------~N----~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~--gv~~~~~~~~~~~lv~DIGGGStEl~~ 159 (519)
....-+. .| .-.+.+.+++++|++|.+.+.-.=+-+.-. |... ..++.+++-+|.| +-..+
T Consensus 64 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~gi 138 (321)
T 3vgl_A 64 AAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQ----GHDDVICITLGTG-LGGGI 138 (321)
T ss_dssp ESSEECTTSSCEEECSSSCCEEECHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEEEE
T ss_pred ccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhCCCEEEEehhhhHHHHHHHhCCCC----CCCCEEEEEeCcc-eEEEE
Confidence 5444222 22 245678889999999999987766555422 2221 2346899999998 77777
Q ss_pred eeCCeEeee
Q 010059 160 GKRGKVVFC 168 (519)
Q Consensus 160 ~~~~~~~~~ 168 (519)
+-+|++...
T Consensus 139 i~~G~l~~G 147 (321)
T 3vgl_A 139 IIGNKLRRG 147 (321)
T ss_dssp EETTEECCC
T ss_pred EECCEEecC
Confidence 788887653
No 72
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=82.79 E-value=3.5 Score=41.83 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=76.8
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccC--CCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGR--DLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~--~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~ 91 (519)
.+.+||+|+.++++.+++. + +++.+.+.++.-.. +. + .+ -+.++..++.+.++. ++.+++..++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~---~--~il~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~i~~~l---~~~~~~~~~i~g 70 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFED---E--RMVKMQNFSHSPDELGRF-Q--KI-LDQLEFREKIARQFV---EETGYSLSSFSA 70 (381)
T ss_dssp EEEEEEECSSEEEEEEEET---T--EEEEEEEEECCHHHHHTC-S--SG-GGGHHHHHHHHHHHH---HTTTCCGGGCSE
T ss_pred eEEEEECCccceeEEEEec---c--hheeeeecccCcccccch-h--hH-HHHHHHHHHHHHHHH---HHcCCCccCceE
Confidence 4789999999999999862 2 56665555432110 10 0 11 122333355555543 444443222322
Q ss_pred -EEe--------hhh-----------------hhcCCh-HHHHHHHHHHhCCceEeeChHH------HHHHHH-------
Q 010059 92 -VAT--------AAV-----------------RAAENK-DEFVECVREKVGFEVDVLTGEQ------EAKFVY------- 131 (519)
Q Consensus 92 -vAT--------sA~-----------------R~A~N~-~~f~~~i~~~tG~~i~iIsg~e------EA~l~~------- 131 (519)
++. ..+ ..+.|- -.+.+.+.+++|+++-|.+.-. +|+...
T Consensus 71 Ii~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~~Pv~v~NDan~~~~~~~a~aaalp~~~r~ 150 (381)
T 1saz_A 71 FVSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVDPVVVDEMEDVARVSGHPNYQRK 150 (381)
T ss_dssp EEEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEESCTTBCCCCGGGTBCSSTTCBCC
T ss_pred EEecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcCCCEEEeCCCccccCcHHHHHcCCcchhhh
Confidence 342 122 233442 3455667889999998877654 332222
Q ss_pred ----------------hhhhccCCCCCCceEEEEECCCceEEEEeeCCeEeeee
Q 010059 132 ----------------MGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCE 169 (519)
Q Consensus 132 ----------------~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~~~~ 169 (519)
.|... +..+.+.+++-+|.|. -...+.+|++....
T Consensus 151 ~gfhgls~~~~aE~~~~g~~~--~~~~~~~v~~~lGtGi-G~g~i~~G~~~~G~ 201 (381)
T 1saz_A 151 SIFHALNQKTVAKEVARMMNK--RYEEMNLVVAHMGGGI-SIAAHRKGRVIDVN 201 (381)
T ss_dssp CCSCHHHHHHHHHHHHHHTTC--CGGGCEEEEEEESSSE-EEEEEETTEEEEEC
T ss_pred cccccccHHHHHHHHHHhcCC--CCccCCEEEEEeCCCc-EEEEEECCEEEEec
Confidence 22211 1122368999999987 55556678876553
No 73
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=82.49 E-value=4.7 Score=43.68 Aligned_cols=111 Identities=14% Similarity=0.212 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHH-H--HcCCCCc---cEEEEEehhh-hhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhcc
Q 010059 65 QARSVESLLMFRDII-Q--SHNISRD---HTRAVATAAV-RAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQF 137 (519)
Q Consensus 65 i~~~~~~L~~f~~~~-~--~~~v~~~---~i~~vATsA~-R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~ 137 (519)
+++..+.++.+.+-+ . ..++.+. +..++-|.+. --..|++...+.+.+..|++-=.+ -+++-++.+|.-
T Consensus 192 ~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl--~~qavlAlyasG-- 267 (655)
T 4am6_A 192 LAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAI--IQESLATCYGAG-- 267 (655)
T ss_dssp HHHHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEE--EEHHHHHHHHSC--
T ss_pred ccccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeee--ccHHHHHHHhCC--
Confidence 344445555444332 2 3567653 3455656543 233567778888888888874444 246666665532
Q ss_pred CCCCCCceEEEEECCCceEEEEeeCCeEee--eeeeehhHHHHHHhh
Q 010059 138 LPVFDRLVLSVDIGGGSTEFVIGKRGKVVF--CESVNLGHVSLSEKF 182 (519)
Q Consensus 138 ~~~~~~~~lv~DIGGGStEl~~~~~~~~~~--~~SlplG~vrl~e~f 182 (519)
+ ...++|||+|+|.|.++.+.+|.+.. ...+++|.-.+++.+
T Consensus 268 l---~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL 311 (655)
T 4am6_A 268 I---STSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLF 311 (655)
T ss_dssp C---SSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred C---CCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHH
Confidence 1 13489999999999999999997764 357999999888754
No 74
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV}
Probab=82.41 E-value=1.5 Score=45.73 Aligned_cols=47 Identities=17% Similarity=0.281 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHHHHHHHhc-cc-ccchhhhhhcccCcch-HHHHHHHHHhhhhccc
Q 010059 361 KAGAQCASIAKDIFEGLRKC-DK-LYNNQVKLIASFEDKD-LEYLEAACLLHNIGHF 414 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~-~~-l~~~~~~~~~~~~~~~-~~lL~~Aa~LhdiG~~ 414 (519)
+|+--|+.+|..+...|... .. ++. .+++.+ +.++++||++||||..
T Consensus 65 ~Hsl~v~~ia~~~~~~l~~~~~~~~~~-------~~~~~~~~~~v~~a~L~HDiGH~ 114 (451)
T 2pgs_A 65 THSLEVSCVGRSLGMRVGETLRAALPD-------WCDPSDLGMVVQSACLAHDIGNP 114 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGSCT-------TCCHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccc-------ccchhHHHHHHHHHHHhhccCCC
Confidence 89999999999998888742 11 100 122323 3599999999999953
No 75
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0
Probab=82.07 E-value=2.5 Score=40.82 Aligned_cols=38 Identities=21% Similarity=0.186 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccC
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS 416 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~ 416 (519)
.|+..|+.+|..|-..+ + ++ ...+-.|++|||||+.+-
T Consensus 108 ~hs~~~a~~a~~la~~~----~-----------~~---~~~~~~agLLhdiGkl~l 145 (275)
T 3m1t_A 108 GNTFEVAIICQELAKRL----G-----------TL---PEEAFTCGILHSIGELLI 145 (275)
T ss_dssp HHHHHHHHHHHHHHHHH----T-----------SC---HHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----C-----------CC---HHHHHHHHHHHHccHHHH
Confidence 68888999888665433 3 12 345789999999998763
No 76
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=80.75 E-value=16 Score=35.82 Aligned_cols=135 Identities=10% Similarity=0.063 Sum_probs=78.4
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (519)
++..||||...+++.+++. +|. ++.+.+.++. . .=.++.++.+.+.++++.. .++.. .-.++|
T Consensus 25 ~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~--~------~~~~~~~~~i~~~i~~~~~---~~~~~--~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE--KLE--RVATERVPTP--T------DDYPLLLETIAGLVAKYDQ---EFACE--GKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECT--TCC--EEEEEEEECC--T------TCHHHHHHHHHHHHHHHHH---HHTSC--CEEEEE
T ss_pred EEEEEEECCCEEEEEEEeC--CCc--EEEEEEecCC--C------CCHHHHHHHHHHHHHHHHH---hcCCc--cEEEEE
Confidence 5789999999999999865 354 4444444421 1 0023344444444544433 23321 234566
Q ss_pred ehhhhhcC------------ChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEee
Q 010059 94 TAAVRAAE------------NKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (519)
Q Consensus 94 TsA~R~A~------------N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~ 161 (519)
....-+.+ +.-.+.+.+++++|++|.+.+.-.=+-+.-.-.-.. ...++.+++-+|.| +-..++-
T Consensus 88 ~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~~~g~~--~~~~~~~~l~~GtG-iG~gii~ 164 (327)
T 4db3_A 88 LPGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEEL--QDAPSVMGLILGTG-FGGGLIY 164 (327)
T ss_dssp ESEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHHTSTTT--TTCSEEEEEEESSS-EEEEEEE
T ss_pred eeccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHHHhCCC--CCCCcEEEEEeCcc-ceEEEEE
Confidence 55543322 223567888999999999988766554443211111 12345788999988 5666677
Q ss_pred CCeEeee
Q 010059 162 RGKVVFC 168 (519)
Q Consensus 162 ~~~~~~~ 168 (519)
+|++...
T Consensus 165 ~G~l~~G 171 (327)
T 4db3_A 165 EGKVFSG 171 (327)
T ss_dssp TTEECCC
T ss_pred CCEEeec
Confidence 8887643
No 77
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=80.29 E-value=3.8 Score=43.55 Aligned_cols=78 Identities=12% Similarity=0.094 Sum_probs=42.8
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeecc-----CCCCc--CC--CCCH-HHHHHHHHHHHHHHHHHHHc
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILG-----RDLSS--SC--SIST-QSQARSVESLLMFRDIIQSH 82 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg-----~~~~~--~g--~ls~-e~i~~~~~~L~~f~~~~~~~ 82 (519)
+++..||+||.|+|.++++. +|.+.-......++..- .+... .| +-++ +....++.++.+ .+.+.
T Consensus 10 ~~~lgID~GTts~Ka~l~d~--~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~---~l~~~ 84 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDA--ELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILE---KMKAS 84 (538)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHH---HHHHT
T ss_pred CEEEEEEEcCcCEEEEEECC--CCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHH---HHHHc
Confidence 57999999999999999973 56543322222221111 11111 11 1122 345555555433 33456
Q ss_pred CCCCccEEEEEeh
Q 010059 83 NISRDHTRAVATA 95 (519)
Q Consensus 83 ~v~~~~i~~vATs 95 (519)
+++..+|.+++-+
T Consensus 85 ~~~~~~I~aIgis 97 (538)
T 4bc3_A 85 GFDFSQVLALSGA 97 (538)
T ss_dssp TCCGGGEEEEEEE
T ss_pred CCChHHeEEEEec
Confidence 7766789888743
No 78
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A
Probab=80.22 E-value=5 Score=38.95 Aligned_cols=38 Identities=13% Similarity=0.042 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcccc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I 415 (519)
.|+..|+.+|..|- ...+ .+ +..-+-.|++|||||+.+
T Consensus 111 ~hs~~~A~~a~~la----~~~~-----------~~--~~~~~~~agLLhdiGkl~ 148 (288)
T 3ljx_A 111 QKSLARAVALQSIT----AQAS-----------TV--APKEAFTLGLLADVGRLA 148 (288)
T ss_dssp HHHHHHHHHHHHHH----HTSS-----------SS--CHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHH----HHCC-----------CC--CHHHHHHHHHHHhccHHH
Confidence 68889998888553 2323 11 245678999999999865
No 79
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=79.64 E-value=49 Score=32.45 Aligned_cols=149 Identities=13% Similarity=0.148 Sum_probs=82.2
Q ss_pred EEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHH-HHHHHHHHHcCCCCccEEEEE
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESL-LMFRDIIQSHNISRDHTRAVA 93 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L-~~f~~~~~~~~v~~~~i~~vA 93 (519)
+-.||.++......+++ ++. ++....+ ++-. ...|..++++-..-.+.| .-+.+.+++.|++..++.+||
T Consensus 3 iLgIdts~~~~~val~~---~g~--i~~~~~~--~~~~--~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia 73 (330)
T 2ivn_A 3 ALGIEGTAHTLGIGIVS---EDK--VLANVFD--TLTT--EKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIA 73 (330)
T ss_dssp EEEEECSSSEEEEEEEC---SSC--EEEEEEE--ECCC--TTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEE
T ss_pred EEEEEccCCCeEEEEEE---CCE--EEEEEEE--Eeec--ccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 67899999999988873 343 4433222 2211 112333333333333333 345556666677766666666
Q ss_pred eh-------hhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEe
Q 010059 94 TA-------AVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (519)
Q Consensus 94 Ts-------A~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~ 166 (519)
.+ ++|.. -.|.+.+....++++.-++-- +|... ++.. -+. +.+ +++.+.||.|+++..+++++.
T Consensus 74 ~~~GPG~~~~lrvg---~~~ak~la~~~~~pl~~v~h~-~aHa~--~a~~-~~~-~~~-~~l~v~GG~t~~i~~~~~~~~ 144 (330)
T 2ivn_A 74 FSQGPGLGPALRVV---ATAARALAVKYRKPIVGVNHC-IAHVE--ITKM-FGV-KDP-VGLYVSGGNTQVLALEGGRYR 144 (330)
T ss_dssp EEEESSCHHHHHHH---HHHHHHHHHHTTCCEEEEEHH-HHHHH--GGGG-GTC-CSC-EEEEECSSCEEEEEEETTEEE
T ss_pred EECCCCchHHHHHH---HHHHHHHHHHcCCCEEeeCcH-HHHHH--HHhh-cCC-CCC-eEEEEcCCCceEEEEcCCeEE
Confidence 42 34442 346666667788888877653 44321 2211 121 223 667777789999988888765
Q ss_pred ee-eeeehhHHHHHHh
Q 010059 167 FC-ESVNLGHVSLSEK 181 (519)
Q Consensus 167 ~~-~SlplG~vrl~e~ 181 (519)
.. .+++-++=++.+.
T Consensus 145 ~lg~t~dds~Gr~fD~ 160 (330)
T 2ivn_A 145 VFGETLDIGIGNAIDV 160 (330)
T ss_dssp EEEEBSSSCHHHHHHH
T ss_pred EEEeecCchhHHHHHH
Confidence 32 3444444444443
No 80
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=78.48 E-value=20 Score=34.42 Aligned_cols=128 Identities=13% Similarity=0.101 Sum_probs=76.7
Q ss_pred EEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls-~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (519)
+..||+|..+++..+++ + |. ++.+.+.+.. ... ..+ ++.++++.+.++..... ....+ .-.+++
T Consensus 2 ~lgiDiGGT~~~~~l~d-~--g~--il~~~~~~~~---~~~---~~~~~~~~~~i~~~i~~~~~~-~~~~i---~~igig 66 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-E--GK--SLGRFQTSGI---NPF---QQDRNEIDTALRSEVLPAIGQ-KASSI---RAVYFY 66 (291)
T ss_dssp EEEEEECSSEEEEEEEE-T--TE--EEEEEEEECC---CTT---TSCHHHHHHHHTTTTHHHHTT-STTTC---CEEEEE
T ss_pred EEEEEeCccceEEEEEe-C--Ce--EEEEEECCCC---Ccc---cCCHHHHHHHHHHHHHHHhCC-Ccccc---cEEEEE
Confidence 56899999999999987 4 43 4444433210 110 112 34455555555543210 00112 235677
Q ss_pred ehhhhhcCChHHHHHHHHHHhCC--ceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEe
Q 010059 94 TAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (519)
Q Consensus 94 TsA~R~A~N~~~f~~~i~~~tG~--~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~ 166 (519)
+...- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||--..+..+|++.
T Consensus 67 ~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~------g--~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 67 GAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC------G--DSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp ETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT------T--TSCEEEEEESSSEEEEEECSSSEEE
T ss_pred CCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc------C--CCCcEEEEecCChheEEECCCCcEE
Confidence 77764 45566788888999995 9999887766655431 2 2446777799999655555677764
No 81
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=77.83 E-value=5.9 Score=41.78 Aligned_cols=74 Identities=9% Similarity=0.053 Sum_probs=42.9
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcCCCCccE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~e~-i~~~~~~L~~f~~~~~~~~v~~~~i 89 (519)
+++..||+|+.|+|..+++. +|.+ +...+.+..+- ....|. -+++. .+.+++++++. + +.+++..+|
T Consensus 5 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~~---~-~~~~~~~~I 74 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADR--DGGL--HFQRSIALETY--GDGNGPVEQDAGDWYDAVQRIASSW---W-QSGVDARRV 74 (511)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCE--EEEEEEECCCB--STTSSCCEECHHHHHHHHHHHHHHH---H-TTTCCGGGE
T ss_pred cEEEEEEeCCCceEEEEECC--CCCE--EEEEEeeccee--cCCCCCEEECHHHHHHHHHHHHHHH---H-hcCCChhHe
Confidence 46899999999999999964 4553 43333332221 122222 23433 34455555544 3 456666678
Q ss_pred EEEEehh
Q 010059 90 RAVATAA 96 (519)
Q Consensus 90 ~~vATsA 96 (519)
.+|+-++
T Consensus 75 ~~Igis~ 81 (511)
T 3hz6_A 75 SAIVLSG 81 (511)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8887543
No 82
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=77.41 E-value=4.8 Score=42.43 Aligned_cols=76 Identities=13% Similarity=0.127 Sum_probs=43.8
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHcCCCCccE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~-e~i~~~~~~L~~f~~~~~~~~v~~~~i 89 (519)
+++..||+|+.|+|..+++ .+|. ++...+.+...- ....|. -++ +-++.+++++++. +++.+++..+|
T Consensus 7 ~~~lgIDiGtts~k~~l~d--~~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~i~~~i~~~---~~~~~~~~~~I 77 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVR--LPDT--VVAVASRPTTLS--SPHPGWAEEDPAQWWDNARAVLAEL---KTTAGESDWRP 77 (508)
T ss_dssp CEEEEEEECSSEEEEEEEE--TTTE--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHH---HHHHCGGGCCE
T ss_pred CEEEEEEecCcceEEEEEC--CCCC--EEEEEEEeccee--cCCCCceEECHHHHHHHHHHHHHHH---HHhcCCChhhe
Confidence 5788999999999999997 3454 444444443221 111222 233 3445555566554 34446655578
Q ss_pred EEEEehhh
Q 010059 90 RAVATAAV 97 (519)
Q Consensus 90 ~~vATsA~ 97 (519)
.+|+-++-
T Consensus 78 ~~Igis~~ 85 (508)
T 3ifr_A 78 GGICVTGM 85 (508)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECC
Confidence 87774443
No 83
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=76.83 E-value=33 Score=33.28 Aligned_cols=135 Identities=10% Similarity=0.103 Sum_probs=80.7
Q ss_pred CceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE
Q 010059 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (519)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~ 91 (519)
...+..||||...+++.+++. +|. ++.+.+.++. . .+ .++.++.+.+.++++.. ..+. ..-.+
T Consensus 23 ~~~~lgiDiGgt~i~~~l~d~--~g~--il~~~~~~~~--~----~~--~~~~~~~i~~~i~~~~~---~~~~--i~~ig 85 (327)
T 2ap1_A 23 NAMYYGFDIGGTKIALGVFDS--TRR--LQWEKRVPTP--H----TS--YSAFLDAVCELVEEADQ---RFGV--KGSVG 85 (327)
T ss_dssp CCEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECC--C----SC--HHHHHHHHHHHHHHHHH---HHTS--CCEEE
T ss_pred CceEEEEEECCCEEEEEEEeC--CCC--EEEEEEecCC--C----CC--HHHHHHHHHHHHHHHHH---hcCC--ccEEE
Confidence 346788999999999999875 354 3444433321 1 00 24455555555555443 2221 12356
Q ss_pred EEehhhhhcC-------C-----hHHHHHHHHHHhCCceEeeChHHHHHHHHh--hhhccCCCCCCceEEEEECCCceEE
Q 010059 92 VATAAVRAAE-------N-----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEF 157 (519)
Q Consensus 92 vATsA~R~A~-------N-----~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~--gv~~~~~~~~~~~lv~DIGGGStEl 157 (519)
+|....-+.. | .-.+.+.+++++|++|.+.+.-.=|-+.-. |... ..++.+++-+|.| +-.
T Consensus 86 i~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~~~g~~~----~~~~~v~l~~GtG-iG~ 160 (327)
T 2ap1_A 86 IGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT----QYPLVMGLILGTG-VGG 160 (327)
T ss_dssp EEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHHTSTTGG----GCSEEEEEEESSS-EEE
T ss_pred EEeeeeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHHHHHhCcCC----CCCcEEEEEECCc-EEE
Confidence 7766553321 1 124567888889999999887766655432 2211 2245788999998 556
Q ss_pred EEeeCCeEeee
Q 010059 158 VIGKRGKVVFC 168 (519)
Q Consensus 158 ~~~~~~~~~~~ 168 (519)
.++-+|++...
T Consensus 161 giv~~G~l~~G 171 (327)
T 2ap1_A 161 GLVLNGKPITG 171 (327)
T ss_dssp EEEETTEEECC
T ss_pred EEEECCEEeec
Confidence 66778877653
No 84
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=76.65 E-value=24 Score=33.86 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=67.9
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (519)
++..||+|..++++.+++. +|. ++.+.+.+.. ..... =.++.++.+.+.++++.+ .. + ...++|
T Consensus 3 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~~~---~~~~~--~~~~~~~~i~~~i~~~~~---~~-~---~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC--EGN--FIGEGSSGPG---NYHNV--GLTRAIENIKEAVKIAAK---GE-A---DVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECT--TSC--EEEEEEESCC---CHHHH--CHHHHHHHHHHHHHHHHT---SC-C---SEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcC--CCC--EEEEEeCCCC---CcccC--CHHHHHHHHHHHHHHHHh---cC-C---CEEEEE
Confidence 4688999999999999864 354 3443333220 00000 023445555555555432 22 3 256788
Q ss_pred ehhhhhcCCh-HHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCc
Q 010059 94 TAAVRAAENK-DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGS 154 (519)
Q Consensus 94 TsA~R~A~N~-~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGS 154 (519)
.... +..++ ..+.+.+++ +|+++.+.+.-.=|-+.-. . .++.+++-+|.|+
T Consensus 67 ~~G~-~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e~---~-----~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 67 VAGL-DSKFDWENFTPLASL-IAPKVIIQHDGVIALFAET---L-----GEPGVVVIAGTGS 118 (299)
T ss_dssp ETTC-CSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHHH---T-----TSCEEEEEESSSE
T ss_pred cCCC-CchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhcc---C-----CCCeEEEEecCCE
Confidence 8887 54333 245566666 8999988776555444322 1 2457899999996
No 85
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=75.89 E-value=8.1 Score=40.71 Aligned_cols=75 Identities=15% Similarity=0.208 Sum_probs=44.0
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCC--CCHH-HHHHHHHHHHHHHHHHHHcCCCCccE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQ-SQARSVESLLMFRDIIQSHNISRDHT 89 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~e-~i~~~~~~L~~f~~~~~~~~v~~~~i 89 (519)
+++..||+|+.|+|..+++. +|.+ +...+.+...- ....|. -+++ -.+.+++++++ ++++.++++.+|
T Consensus 3 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~---~~~~~~~~~~~I 73 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDH--DANI--ISVSQREFEQI--YPKPGWVEHDPMEIWATQSSTLVE---VLAKADISSDQI 73 (510)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCCE--EEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHH---HHHHTTCCGGGE
T ss_pred cEEEEEEcCCcceEEEEECC--CCCE--EEEEEEecccc--cCCCCcEEECHHHHHHHHHHHHHH---HHHHcCCChhhe
Confidence 46889999999999999964 4553 44333333221 112222 2333 34545555544 455667776678
Q ss_pred EEEEehh
Q 010059 90 RAVATAA 96 (519)
Q Consensus 90 ~~vATsA 96 (519)
.+|+-++
T Consensus 74 ~~Igis~ 80 (510)
T 2p3r_A 74 AAIGITN 80 (510)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 8887544
No 86
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=75.43 E-value=7.8 Score=40.68 Aligned_cols=74 Identities=14% Similarity=0.225 Sum_probs=43.3
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHcCCCCccE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~-e~i~~~~~~L~~f~~~~~~~~v~~~~i 89 (519)
+++..||+|+.|+|..+++. +|.+ +...+.+... .....|. -.+ +-.+.+++++++ ++++.+++..+|
T Consensus 6 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~--~~p~~g~~e~d~~~~~~~~~~~i~~---~~~~~~~~~~~I 76 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ--KGEI--AGVAQREFKQ--YFPQSGWVEHDANEIWTSVLAVMTE---VINENDVRADQI 76 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHHH---HHHTTTCCGGGE
T ss_pred cEEEEEEeCccceEEEEEcC--CCCE--EEEEEeeccc--ccCCCCcEEECHHHHHHHHHHHHHH---HHHhcCCCcccE
Confidence 47889999999999999964 4554 4333333321 1112222 233 334445555544 455667766678
Q ss_pred EEEEeh
Q 010059 90 RAVATA 95 (519)
Q Consensus 90 ~~vATs 95 (519)
.+|+-+
T Consensus 77 ~~Igis 82 (501)
T 3g25_A 77 AGIGIT 82 (501)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887744
No 87
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=75.31 E-value=8.3 Score=40.57 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=43.0
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHcCCCCccE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~-e~i~~~~~~L~~f~~~~~~~~v~~~~i 89 (519)
+++..||+|+.|+|..+++. +|.+ +...+.+...- ....|. -.+ +-.+.+++++++ ++++.+++..+|
T Consensus 5 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~---~~~~~~~~~~~I 75 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDR--NGKK--IGSSQKEFPQY--FPKSGWVEHNANEIWNSVQSVIAG---AFIESGIRPEAI 75 (506)
T ss_dssp CEEEEEEECSSEEEEEEEET--TSCE--EEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHH---HHHHHTCCGGGE
T ss_pred CEEEEEEcCCCceEEEEECC--CCCE--EEEEEEecCcc--CCCCCcEEECHHHHHHHHHHHHHH---HHHHcCCChhhe
Confidence 47899999999999999974 4553 43333333211 112221 233 334555555554 445556766678
Q ss_pred EEEEeh
Q 010059 90 RAVATA 95 (519)
Q Consensus 90 ~~vATs 95 (519)
.+++-+
T Consensus 76 ~~Igis 81 (506)
T 3h3n_X 76 AGIGIT 81 (506)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 887744
No 88
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=75.26 E-value=7.5 Score=40.77 Aligned_cols=76 Identities=14% Similarity=0.130 Sum_probs=44.2
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCCccE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~l--s~-e~i~~~~~~L~~f~~~~~~~~v~~~~i 89 (519)
+++..||+|+.|+|..+++. +|. ++...+.+...- ....|.. .+ +-.+.+++++++. +++.+++..+|
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~--~g~--~~~~~~~~~~~~--~p~~g~~e~d~~~~~~~~~~~i~~~---~~~~~~~~~~i 73 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR--ESN--IHGIGQYEFPQH--YPRPGWVEHNPEEIWDAQLRAIKDA---IQSARIEPNQI 73 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--EEEEEEEECCCB--CCSTTCCEECHHHHHHHHHHHHHHH---HHHHTCCGGGE
T ss_pred cEEEEEecCCchhEEEEECC--CCC--EEEEEEecccee--cCCCCcEEECHHHHHHHHHHHHHHH---HHhcCCCcccE
Confidence 36889999999999999963 455 444444443221 1222322 23 3445555666554 44456665668
Q ss_pred EEEEehhh
Q 010059 90 RAVATAAV 97 (519)
Q Consensus 90 ~~vATsA~ 97 (519)
.+|+-++-
T Consensus 74 ~~Igis~~ 81 (497)
T 2zf5_O 74 AAIGVTNQ 81 (497)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 77774443
No 89
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=74.00 E-value=51 Score=32.19 Aligned_cols=135 Identities=10% Similarity=0.018 Sum_probs=81.0
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE--
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~-- 90 (519)
..+..||||..++++.+++. +|. ++.+.+.+.. . -.++.++.+.+.++++.+.... +..++.
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~---~~~~~~~~i~~~i~~~~~~~~~---~~~~i~gi 93 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM--KGE--IVKKYTQFNP------K---TYEERINLILQMCVEAAAEAVK---LNCRILGV 93 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECC------S---SHHHHHHHHHHHHHHHHHHHHH---TTEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC--CCc--EEEEEEEcCC------C---CHHHHHHHHHHHHHHHHHhccc---ccCceEEE
Confidence 45788999999999999975 354 3443333321 1 1245567777777776543321 112343
Q ss_pred EEEehhh--------hhcCCh------HHHHHHHHHHhCCceEeeChHHHHHHHHh--hhhccCCCCCCceEEEEECCCc
Q 010059 91 AVATAAV--------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGS 154 (519)
Q Consensus 91 ~vATsA~--------R~A~N~------~~f~~~i~~~tG~~i~iIsg~eEA~l~~~--gv~~~~~~~~~~~lv~DIGGGS 154 (519)
+++.... ..+.|- -.+.+.+++++|++|.+.+.-.=|-+.-. |... ..++.+++-+|.|
T Consensus 94 gi~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~v~i~~GtG- 168 (343)
T 2yhw_A 94 GISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGK----GLENFVTLITGTG- 168 (343)
T ss_dssp EEEESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHCSCEEEEEHHHHHHHHHHHTSTTT----TCSCEEEEEESSS-
T ss_pred EEecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCC-
Confidence 3444433 122332 24567888899999999887665555432 2211 2245899999998
Q ss_pred eEEEEeeCCeEeee
Q 010059 155 TEFVIGKRGKVVFC 168 (519)
Q Consensus 155 tEl~~~~~~~~~~~ 168 (519)
+-..++-+|++...
T Consensus 169 iG~gii~~G~l~~G 182 (343)
T 2yhw_A 169 IGGGIIHQHELIHG 182 (343)
T ss_dssp EEEEEEETTEECCC
T ss_pred EEEEEEECCEEecC
Confidence 56667778877643
No 90
>3m5f_A Metal dependent phosphohydrolase; CAS3, prokaryotic immune system, HD-motif, structural genomics, PSI-2; 2.30A {Methanocaldococcus jannaschii} PDB: 3s4l_A
Probab=72.44 E-value=3.7 Score=38.84 Aligned_cols=58 Identities=17% Similarity=0.120 Sum_probs=35.9
Q ss_pred hHHHHHHHHHhhhhcccc--------C------CCchhhhhHHHHHcCCCCCCCCHHH-HHHHHHHHHhccCCC
Q 010059 398 DLEYLEAACLLHNIGHFT--------S------KKGYHKQSCHIIMNGDHLYGYSTDE-IKLIALLTRFHRKKF 456 (519)
Q Consensus 398 ~~~lL~~Aa~LhdiG~~I--------~------~~~h~~Hs~yiI~ns~~l~G~s~~E-~~~iA~iaryh~k~~ 456 (519)
.+.++.+||+|||+|+.- + ...|.--|++++...- -.....++ ..++++.+.+|.+..
T Consensus 55 ~~~ll~~a~llHDiGKa~~~FQ~k~l~~~~~~~~~~He~lSa~fl~~~l-~~~~~~~~la~lialAI~sHH~~l 127 (244)
T 3m5f_A 55 VDEFMKILIKLHDIGKASKIYQRAIINDQEKLMGFRHELVSAYYTYHIL-LKKFGDKNLAFIGALTVMLHHEPI 127 (244)
T ss_dssp HHHHHHHHHHHTTGGGGBHHHHHHHHCTTSCCSSCCHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHcccccCCHHHHHHHHhccCCCCCCChHHHHHHHHHHHH-hhccchHHHHHHHHHHHHHhCHHH
Confidence 468899999999999852 1 3456666776664431 11122333 567777666666655
No 91
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=72.05 E-value=65 Score=30.17 Aligned_cols=141 Identities=16% Similarity=0.163 Sum_probs=79.6
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEE-EeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTI-DTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i-~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~v 92 (519)
.+..||||..++++.+++.. ++. ++ .+.+.++. .. .=.++.++.+.+.++++.+... ..+.....++
T Consensus 13 ~~lgidiggt~i~~~l~dl~-~g~--i~~~~~~~~~~--~~-----~~~~~~~~~i~~~i~~~~~~~~--~~~~~~~igi 80 (267)
T 1woq_A 13 PLIGIDIGGTGIKGGIVDLK-KGK--LLGERFRVPTP--QP-----ATPESVAEAVALVVAELSARPE--APAAGSPVGV 80 (267)
T ss_dssp CEEEEEECSSEEEEEEEETT-TTE--EEEEEEEEECC--SS-----CCHHHHHHHHHHHHHHHHTSTT--CCCTTCCEEE
T ss_pred EEEEEEECCCEEEEEEEECC-CCe--EEEEEEecCCC--cc-----CCHHHHHHHHHHHHHHHHHhcc--ccCccceEEE
Confidence 47889999999999999763 243 23 22222221 10 0023445566666666543111 0111123456
Q ss_pred Eehhh------hhcCCh------HHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEe
Q 010059 93 ATAAV------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG 160 (519)
Q Consensus 93 ATsA~------R~A~N~------~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~ 160 (519)
|.... ..+.|- -.+.+.+++++|++|.+.+.-.=|-+.-.-.-.... .+.+.+++-+|.| +-..++
T Consensus 81 ~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~~~-~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 81 TFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYGAGAG-VKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp EESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHHHHHHSTTTT-CCSEEEEEEESSS-EEEEEE
T ss_pred EccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHCCCEEEeehhHHHHHHHHHhCCCCC-CCCcEEEEEECcc-eEEEEE
Confidence 65443 333442 346688889999999998877766655321111111 1123678889987 777778
Q ss_pred eCCeEeee
Q 010059 161 KRGKVVFC 168 (519)
Q Consensus 161 ~~~~~~~~ 168 (519)
-+|++...
T Consensus 159 ~~G~l~~G 166 (267)
T 1woq_A 159 FDGKLVPN 166 (267)
T ss_dssp ETTEEETT
T ss_pred ECCEEccC
Confidence 88887643
No 92
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=71.43 E-value=22 Score=33.88 Aligned_cols=131 Identities=13% Similarity=0.136 Sum_probs=76.7
Q ss_pred EEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEe
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (519)
+..||+|..++++.+++. +|. ++.+.+.++.- . .+ .++.++.+.+.++++.+ + + ...++|.
T Consensus 3 ~lgidiggt~~~~~l~d~--~g~--il~~~~~~~~~--~---~~--~~~~~~~i~~~i~~~~~---~--~---~~igi~~ 63 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGA--DGQ--IRDRRELPTPA--S---QT--PEALRDALSALVSPLQA---H--A---QRVAIAS 63 (289)
T ss_dssp EEEEEECSSEEEEEEECT--TCC--EEEEEEEECCS--S---CC--HHHHHHHHHHHHTTTGG---G--C---SEEEEEE
T ss_pred EEEEEeCCCEEEEEEECC--CCC--EEEEEEecCCC--C---CC--HHHHHHHHHHHHHHHHh---h--C---CEEEEEe
Confidence 678999999999999864 354 45444444211 0 00 23444444444444322 1 2 2456666
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEee
Q 010059 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (519)
Q Consensus 95 sA~R~--------A~N~-----~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~ 161 (519)
...-+ +.|- -.+.+.+++++|++|.+.+.-.=|-+.-.-.-. .... +.+++-+|.| +-..+..
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~g~--~~~~-~~v~l~~GtG-iG~gii~ 139 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALD--GDIT-DMVFITVSTG-VGGGVVS 139 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHTSC--TTCC-CEEEEEESSS-EEEEEEE
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHhCC--CCCc-eEEEEEeCcc-EEEEEEE
Confidence 55422 2222 246788888999999998865555444221111 1122 6899999999 6777777
Q ss_pred CCeEeee
Q 010059 162 RGKVVFC 168 (519)
Q Consensus 162 ~~~~~~~ 168 (519)
+|++...
T Consensus 140 ~G~l~~G 146 (289)
T 2aa4_A 140 GCKLLTG 146 (289)
T ss_dssp TTEEECC
T ss_pred CCEEeeC
Confidence 8887643
No 93
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=71.26 E-value=55 Score=31.55 Aligned_cols=127 Identities=16% Similarity=0.223 Sum_probs=75.8
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~v 92 (519)
+++..||||..++++.+++. +|. ++.+.+.++. + .++.++++. +.++++.+. -.++
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~t~-------~---~~~~l~~i~-------~~~~~~~i~---gigi 58 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE--DGT--IIDRIEFPTX-------M---PDETIEXVI-------QYFSQFSLQ---AIGI 58 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT--TSC--EEEEEEEECC-------C---HHHHHHHHH-------HHHTTSCCS---EEEE
T ss_pred cEEEEEEECcceeEEEEEEC--CCc--EEEEEEecCC-------C---hHHHHHHHH-------HHhccCCce---EEEE
Confidence 45789999999999999864 454 3554444431 0 123333332 233334442 3455
Q ss_pred Eehhh-------------hhcCC----hHHHHHHHHHHhCCceEeeChHHHHHHHH--hhhhccCCCCCCceEEEEECCC
Q 010059 93 ATAAV-------------RAAEN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGG 153 (519)
Q Consensus 93 ATsA~-------------R~A~N----~~~f~~~i~~~tG~~i~iIsg~eEA~l~~--~gv~~~~~~~~~~~lv~DIGGG 153 (519)
|+... ..+.| .-.+.+.+++++|++|.+.+.-.=|-+.- +|... ..++.+++-+|.|
T Consensus 59 ~~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~~~----~~~~~~~l~~GtG 134 (302)
T 3epq_A 59 GSFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGEAX----GLDSCLYITIGTG 134 (302)
T ss_dssp EECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEEEEEESSS
T ss_pred EeceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCc
Confidence 55332 22333 23567889999999999988766554442 23221 2245888888876
Q ss_pred ceEEEEeeCCeEeee
Q 010059 154 STEFVIGKRGKVVFC 168 (519)
Q Consensus 154 StEl~~~~~~~~~~~ 168 (519)
+--.++-+|++...
T Consensus 135 -iG~gii~~G~l~~G 148 (302)
T 3epq_A 135 -IGAGAIVEGRLLQG 148 (302)
T ss_dssp -EEEEEEETTEECCS
T ss_pred -eEEEEEECCEEccc
Confidence 55666678887654
No 94
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=71.05 E-value=20 Score=34.38 Aligned_cols=129 Identities=11% Similarity=0.132 Sum_probs=68.5
Q ss_pred EEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEe
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (519)
+-+||||-.++++-+++ ++ +++...+.++. .+ +.+.+ ...++++++.++.+..++..++=
T Consensus 4 lL~IDIGNT~iK~gl~d---~~--~l~~~~r~~T~-~~--------t~de~------~~~l~~ll~~~~~~~~~I~~iiI 63 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD---GD--EIKLRFRHTSK-VS--------TSDEL------GIFLKSVLRENNCSPETIRKIAI 63 (266)
T ss_dssp EEEEEECSSEEEEEEEE---TT--EEEEEEEEECS-CC--------CHHHH------HHHHHHHHHTTTCCGGGCCEEEE
T ss_pred EEEEEECCCeEEEEEEE---CC--EEEEEEEecCC-CC--------CHHHH------HHHHHHHHHHcCCChhhceEEEE
Confidence 67999999999999985 23 45555544433 11 22222 23345566667765445544444
Q ss_pred hhhhhcCChHHHHHHHHHHhCCceEeeChHHH----------------HHHHHhhhhccCCCCCCceEEEEECCCceEEE
Q 010059 95 AAVRAAENKDEFVECVREKVGFEVDVLTGEQE----------------AKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (519)
Q Consensus 95 sA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eE----------------A~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~ 158 (519)
+.+.-. -...+...+++..+.++.+++.... --....|+.... +..+.+|+|.|..-|==.
T Consensus 64 SSVvp~-~~~~l~~~~~~~~~~~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~--~~~~~iVVD~GTA~T~d~ 140 (266)
T 3djc_A 64 CSVVPQ-VDYSLRSACVKYFSIDPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSF--PNQNIIVIDFGTATTFCA 140 (266)
T ss_dssp EESCHH-HHHHHHHHHHHHTCCCCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHS--TTSEEEEEEESSEEEEEE
T ss_pred ecchHh-HHHHHHHHHHHHcCCCeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhc--CCCCEEEEECCCeeEEEE
Confidence 433321 1223444455556777777662211 011222222222 235689999999988333
Q ss_pred EeeCCeEe
Q 010059 159 IGKRGKVV 166 (519)
Q Consensus 159 ~~~~~~~~ 166 (519)
+-.+|+..
T Consensus 141 v~~~g~~l 148 (266)
T 3djc_A 141 ISHKKAYL 148 (266)
T ss_dssp ECTTSEEE
T ss_pred EcCCCcEE
Confidence 33445544
No 95
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=70.73 E-value=34 Score=33.18 Aligned_cols=143 Identities=17% Similarity=0.194 Sum_probs=76.9
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE--
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~-- 90 (519)
.++..||||.++++..+++. +|. ++.+.+.++. +. ..++.++.+.+.++++. ++++. ++.
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~--~~------~~~~~~~~i~~~i~~~~---~~~~~---~i~gi 68 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTA--EGE--TLHCEKKRTA--EV------IAPGLVSGIGEMIDEQL---RRFNA---RCHGL 68 (310)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEEHH--HH------HTTCHHHHHHHHHHHHH---HHHTE---EEEEE
T ss_pred CEEEEEEeCCCEEEEEEECC--CCC--EEEEEEecCc--cc------cHHHHHHHHHHHHHHHH---HhcCC---CeeEE
Confidence 46789999999999999975 354 3443333321 10 01223444444444433 33332 233
Q ss_pred EEEehh--------hhhcCCh-------HHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCce
Q 010059 91 AVATAA--------VRAAENK-------DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (519)
Q Consensus 91 ~vATsA--------~R~A~N~-------~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGSt 155 (519)
.+|... ++.+.|- -.+.+.+++++|++|.+.+.-.=|-+....- ... ...+.+++-+|.| +
T Consensus 69 gi~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDanaaa~~e~~~-~~~--~~~~~~~v~~GtG-i 144 (310)
T 3htv_A 69 VMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVE-NRL--TQQLVLAAYLGTG-M 144 (310)
T ss_dssp EEEESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHHHHHH-TTC--TTSCEEEEEESSS-E
T ss_pred EEeccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHHHHHHHHhh-ccc--CCceEEEEEecee-E
Confidence 333322 3345442 2467899999999999988776554432211 112 2345788888876 4
Q ss_pred EEEEeeCCeEeeeee---eehhHHH
Q 010059 156 EFVIGKRGKVVFCES---VNLGHVS 177 (519)
Q Consensus 156 El~~~~~~~~~~~~S---lplG~vr 177 (519)
--.++-+|++....+ -.+|.+.
T Consensus 145 G~gii~~G~l~~G~~g~aGEiGh~~ 169 (310)
T 3htv_A 145 GFAVWMNGAPWTGAHGVAGELGHIP 169 (310)
T ss_dssp EEEEEETTEEECCSSSCCCC-----
T ss_pred EEEEEECCEEeecCCCCceeCcceE
Confidence 445566788765432 3455443
No 96
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=70.00 E-value=64 Score=30.95 Aligned_cols=133 Identities=13% Similarity=0.046 Sum_probs=79.1
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (519)
++..||||..++++.+++.+ +. +.+.+.++. ... .++.++.+.+.++++.+.. ...+. -.++|
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~--~~---l~~~~~~~~------~~~--~~~~~~~i~~~i~~~~~~~-~~~i~---gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK--RL---LSKVVVPTP------KEG--GERVAEALAEAAERAEREA-GVRGE---AIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS--SB---SCCEEEECC------SSC--HHHHHHHHHHHHHHHHHHH-TCCCS---SEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCC--Cc---EEEEEEcCC------CCC--hHHHHHHHHHHHHHHHhhc-cCCce---EEEEE
Confidence 36899999999999998643 32 233333321 111 1566777777777765433 22332 24566
Q ss_pred ehhhhh--------cCCh-----HHHHHHHHHHhCCceEeeChHHHHHHHHh--hhhccCCCCCCceEEEEECCCceEEE
Q 010059 94 TAAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (519)
Q Consensus 94 TsA~R~--------A~N~-----~~f~~~i~~~tG~~i~iIsg~eEA~l~~~--gv~~~~~~~~~~~lv~DIGGGStEl~ 158 (519)
....-+ +.|- -.+.+.+++++|++|.+.+.-.=|-+.-. |... ..++.+++-+|.| +--.
T Consensus 65 ~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~g 139 (302)
T 3vov_A 65 TPGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHHLGAAQ----GEESSLYLTVSTG-IGGG 139 (302)
T ss_dssp ESSCEETTTTEEC---CCTTCTTCCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT----TCSCEEEEEESSS-EEEE
T ss_pred ecccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhCCCEEEEechHHHHHHHHHhCCCC----CCCCEEEEEECCc-eeEE
Confidence 544322 3332 34678888999999999887665544432 2211 2345899999988 4555
Q ss_pred EeeCCeEeee
Q 010059 159 IGKRGKVVFC 168 (519)
Q Consensus 159 ~~~~~~~~~~ 168 (519)
++-+|++...
T Consensus 140 ii~~g~l~~G 149 (302)
T 3vov_A 140 VVLGGRVLRG 149 (302)
T ss_dssp EEETTEECCC
T ss_pred EEECCEEeeC
Confidence 5667877643
No 97
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=68.97 E-value=12 Score=39.21 Aligned_cols=71 Identities=15% Similarity=0.162 Sum_probs=39.0
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCC--CCCHH-HHHHHHHHHHHHHHHHHHcCCCCccE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSC--SISTQ-SQARSVESLLMFRDIIQSHNISRDHT 89 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g--~ls~e-~i~~~~~~L~~f~~~~~~~~v~~~~i 89 (519)
+++..||+|+.|+|..+++. +|.+ +...+.+...- ....| +-.++ -.+.+++++++. +++.+ .+|
T Consensus 4 ~~~lgIDiGtts~K~~l~d~--~G~i--l~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~~---~~~~~---~~I 71 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDI--NGKA--VASVSKGYPLI--QTKVGQAEEDPKLIFDAVQEIIFDL---TQKID---GKI 71 (504)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSCE--EEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHH---HHTCS---SEE
T ss_pred CEEEEEEecCCceEEEEEcC--CCCE--EEEEEeeccee--cCCCCcEEECHHHHHHHHHHHHHHH---HHhCC---CCe
Confidence 47899999999999999964 4553 33333332211 11222 12333 344445555544 34433 357
Q ss_pred EEEEeh
Q 010059 90 RAVATA 95 (519)
Q Consensus 90 ~~vATs 95 (519)
.+|+-+
T Consensus 72 ~~Igis 77 (504)
T 3ll3_A 72 AAISWS 77 (504)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777643
No 98
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=67.37 E-value=10 Score=40.33 Aligned_cols=73 Identities=12% Similarity=0.244 Sum_probs=42.6
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeec---cCCCCcCCCCCH-HHHHHHHHHHHHHHHHHHHcCCCCcc
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVIL---GRDLSSSCSIST-QSQARSVESLLMFRDIIQSHNISRDH 88 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrL---g~~~~~~g~ls~-e~i~~~~~~L~~f~~~~~~~~v~~~~ 88 (519)
+++..||+|+.|+|..+++. +|.+ +...+.+..+ ..+-. .-++ +-.+.+++++++. +++.+++..+
T Consensus 5 ~~~lgIDiGtts~ka~l~d~--~G~i--l~~~~~~~~~~~p~~g~~---eqdp~~~~~~~~~~i~~~---~~~~~~~~~~ 74 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDL--QGRM--VGQASREITMFKPKADFV---EQSSENIWQAVCNAVRDA---VNQADINPIQ 74 (554)
T ss_dssp CEEEEEEECSSEEEEEEEET--TSCE--EEEEEEECCCEEEETTEE---EECHHHHHHHHHHHHHHH---HHHHTCCGGG
T ss_pred cEEEEEEECcccEEEEEECC--CCCE--EEEEEEecccccCCCCcc---ccCHHHHHHHHHHHHHHH---HHHcCCCHhH
Confidence 47899999999999999973 4654 3333333211 11111 1233 3445555666554 4445666667
Q ss_pred EEEEEeh
Q 010059 89 TRAVATA 95 (519)
Q Consensus 89 i~~vATs 95 (519)
|.+++-+
T Consensus 75 I~~Igis 81 (554)
T 3l0q_A 75 VKGLGFD 81 (554)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 8888743
No 99
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=67.13 E-value=43 Score=31.83 Aligned_cols=125 Identities=14% Similarity=0.071 Sum_probs=74.8
Q ss_pred EEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEe
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (519)
+..||+|...+++.+++. +|. ++.+.+.++. .+. +..++.+.++. ++..+ .-.++|.
T Consensus 6 ~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~----------~~~---~~~~~~i~~~i---~~~~i---~gigi~~ 62 (292)
T 2gup_A 6 IATIDIGGTGIKFASLTP--DGK--ILDKTSISTP----------ENL---EDLLAWLDQRL---SEQDY---SGIAMSV 62 (292)
T ss_dssp EEEEEEETTEEEEEEECT--TCC--EEEEEEECCC----------SSH---HHHHHHHHHHH---TTSCC---SEEEEEE
T ss_pred EEEEEECCCEEEEEEECC--CCC--EEEEEEEeCC----------CCH---HHHHHHHHHHH---HhCCC---cEEEEEe
Confidence 678999999999999864 354 3444433321 122 22333333332 22233 2356666
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEee
Q 010059 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (519)
Q Consensus 95 sA~R~--------A~N~-----~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~ 161 (519)
...-+ +.|- -.+.+.+ +++|++|.+.+.-.=|-+.-.- ... ..++.+++-+|.| +-..+..
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~--~~~--~~~~~v~l~~GtG-iG~giv~ 136 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL--AHP--ELENAACVVIGTG-IGGAMII 136 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH--HCT--TCSSEEEEEESSS-EEEEEEE
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH--hcC--CCCeEEEEEECCc-eEEEEEE
Confidence 55422 2332 2466778 8899999998877666555432 211 2346899999998 5666777
Q ss_pred CCeEeee
Q 010059 162 RGKVVFC 168 (519)
Q Consensus 162 ~~~~~~~ 168 (519)
+|++...
T Consensus 137 ~G~l~~G 143 (292)
T 2gup_A 137 NGRLHRG 143 (292)
T ss_dssp TTEEECC
T ss_pred CCEEEec
Confidence 8887653
No 100
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=66.93 E-value=18 Score=37.90 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=43.8
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCCccEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHTR 90 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~l--s~-e~i~~~~~~L~~f~~~~~~~~v~~~~i~ 90 (519)
++..||+|+.|+|..+++. +|. ++.+.+.+.... ....|.. .+ +-.+.+++++++. +++.+++..+|.
T Consensus 3 ~~lgiDiGtts~k~~l~d~--~G~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~---~~~~~~~~~~i~ 73 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH--SGE--IYSTGQLEHDQI--FPRAGWVEHNPEQIWNNVREVVGLA---LTRGNLTHEDIA 73 (504)
T ss_dssp EEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHH---HHHTTCCGGGEE
T ss_pred EEEEEecCCcceEEEEECC--CCC--EEEEEEEeccee--cCCCCceeECHHHHHHHHHHHHHHH---HHHcCCCcccEE
Confidence 5789999999999999964 455 444444443221 1222322 33 3455555555544 455566555688
Q ss_pred EEEehhh
Q 010059 91 AVATAAV 97 (519)
Q Consensus 91 ~vATsA~ 97 (519)
+|+-++-
T Consensus 74 ~Igis~~ 80 (504)
T 2d4w_A 74 AVGITNQ 80 (504)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 7775444
No 101
>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Coxiella burnetii}
Probab=64.28 E-value=5.4 Score=40.31 Aligned_cols=41 Identities=15% Similarity=0.045 Sum_probs=28.4
Q ss_pred hhHHH-HHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcccc
Q 010059 361 KAGAQ-CASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (519)
Q Consensus 361 ~ha~~-V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I 415 (519)
+|.-. |+.+|..+.+.- .. ..+-++.++-+||+|||||+-+
T Consensus 78 eHtLerVa~~A~~l~~~Y----P~----------~~~~Er~~l~~aALLHDIGKl~ 119 (393)
T 3kq5_A 78 NEGLLRGVNSLNHYIQNH----PE----------ATPLERYALFSAGLLLEVAHAV 119 (393)
T ss_dssp HHHHHHHHHHHHHHHHHC----TT----------CCHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHhC----CC----------CCchHHHHHHHHHHHhccchhe
Confidence 56666 777787665432 21 1122488999999999999885
No 102
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=64.25 E-value=15 Score=38.37 Aligned_cols=77 Identities=8% Similarity=-0.010 Sum_probs=42.5
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCC--CCH-HHHHHHHHHHHHHHHHHHHcCCCCccE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--IST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~--ls~-e~i~~~~~~L~~f~~~~~~~~v~~~~i 89 (519)
+++..||+|+.++|..+++. +|. ++.+.+.+...-. ...|. -.+ +-.+.+++++++..+... .+++..+|
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~~--~~~g~~e~d~~~~~~~i~~~i~~~~~~~~-~~~~~~~i 76 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE--ELN--IVHSNNLNHEQKC--LKPGWYEHDPIEIMTNLYNLMNEGIKVLK-DKYTSVII 76 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCCBC--CSTTCCEECHHHHHHHHHHHHHHHHHHHH-HHSSSCEE
T ss_pred cEEEEEEeCCcceEEEEECC--CCC--EEEEEEEeeeeec--CCCCcEEECHHHHHHHHHHHHHHHHHHhh-cCCCccce
Confidence 36789999999999999964 455 4444444432211 11222 123 445566666665543220 03443467
Q ss_pred EEEEehh
Q 010059 90 RAVATAA 96 (519)
Q Consensus 90 ~~vATsA 96 (519)
.+|+-++
T Consensus 77 ~~Igis~ 83 (503)
T 2w40_A 77 KCIGITN 83 (503)
T ss_dssp EEEEEEE
T ss_pred EEEEEcC
Confidence 7776443
No 103
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=63.65 E-value=16 Score=38.14 Aligned_cols=73 Identities=10% Similarity=0.146 Sum_probs=40.9
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCCccEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHTR 90 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~l--s~-e~i~~~~~~L~~f~~~~~~~~v~~~~i~ 90 (519)
.+..||+|+.++|..+++. +|. ++.+.+.+...- ....|.. .+ +-.+.+++++++. +++.+++..+|.
T Consensus 3 ~~lgiDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~---~~~~~~~~~~i~ 73 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTL--EGR--PVAVAKREFRQL--YPKPGWVEHDPLEIWETTLWAAREV---LRRAGAEAGEVL 73 (495)
T ss_dssp CEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCEE--CSSTTCCEECHHHHHHHHHHHHHHH---HHHTTCCGGGCC
T ss_pred EEEEEeeCCcceEEEEECC--CCC--EEEEEEEeecee--cCCCCcEeeCHHHHHHHHHHHHHHH---HHhcCCCcccEE
Confidence 4789999999999999964 455 444444433221 1112222 23 3345555556544 445565545566
Q ss_pred EEEeh
Q 010059 91 AVATA 95 (519)
Q Consensus 91 ~vATs 95 (519)
+|+-+
T Consensus 74 ~Igis 78 (495)
T 2dpn_A 74 ALGIT 78 (495)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66543
No 104
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=62.31 E-value=6.2 Score=34.46 Aligned_cols=86 Identities=17% Similarity=0.226 Sum_probs=56.9
Q ss_pred eEEEEEecccceeeeEEEEeCCCC-EEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGK-FLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~-~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~v 92 (519)
++-.||.|+..+-+.|.+. .|. ..++.-.... . .+.-...+.+.+++++|+++ ..+|
T Consensus 4 riLGiDpG~~riGvAv~d~--~g~~a~p~~~I~~~----~-------------~r~~~~~~~l~~li~~~~~~---~ivV 61 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE--MGWTAQGIETIKIN----E-------------AEGDYGLSRLSELIKDYTID---KIVL 61 (150)
T ss_dssp EEEEEEECSSEEEEEEECT--TSSSEEEEEEEECB----G-------------GGTBCCHHHHHHHHTTSEEE---EEEE
T ss_pred EEEEEEccCCEEEEEEEEC--CCCEEeeEEEEEcC----C-------------cchHHHHHHHHHHHHHcCCC---EEEE
Confidence 4789999999999888854 333 2223222111 1 02224466777888888873 5678
Q ss_pred E-------ehhhhhcCChHHHHHHHHHHhCCceEeeC
Q 010059 93 A-------TAAVRAAENKDEFVECVREKVGFEVDVLT 122 (519)
Q Consensus 93 A-------TsA~R~A~N~~~f~~~i~~~tG~~i~iIs 122 (519)
+ |+ -+.+.-.+.|+.++..+.+++|...|
T Consensus 62 GlP~~~nGt~-~~~~~~ar~f~~~L~~~~~lpV~~vD 97 (150)
T 1vhx_A 62 GFPKNMNGTV-GPRGEASQTFAKVLETTYNVPVVLWD 97 (150)
T ss_dssp ECCCCBTTBC-CHHHHHHHHHHHHHHHHHCSCEEEEC
T ss_pred eeeecCCcch-hHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 7 44 35556667899999888899998854
No 105
>3aql_A Poly(A) polymerase; transferase/RNA, ATP-binding, nucleotide-binding, RNA-bindin transferase, nucleotidyltransferase, ATP binding, A-phospho; 3.00A {Escherichia coli} PDB: 3aqn_A* 3aqk_A 3aqm_A
Probab=60.51 E-value=7.2 Score=40.06 Aligned_cols=54 Identities=4% Similarity=-0.043 Sum_probs=38.3
Q ss_pred HHHHHHHHhh-hhccccC-------C---CchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhcc
Q 010059 400 EYLEAACLLH-NIGHFTS-------K---KGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHR 453 (519)
Q Consensus 400 ~lL~~Aa~Lh-diG~~I~-------~---~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~ 453 (519)
.+|.+||+|| |||+... . ..|.+-+..++..--...||+.++...++.++..|.
T Consensus 287 ~~L~lAALLH~di~K~~~~~~~~~G~~~~~~h~~~ga~~a~~~~~rl~l~~r~~~~v~~lv~lq~ 351 (415)
T 3aql_A 287 PAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQL 351 (415)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHhcCcchhhhhhhhhhccCCCchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 5788999999 9998521 1 235555566664322369999999999999986554
No 106
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=60.27 E-value=25 Score=35.37 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|...+-.+..... +.. .+++.+..-+-+||+.||+|.
T Consensus 85 ~HA~dV~q~~~~ll~~~~-l~~----------~l~~le~~alliAAl~HDv~H 126 (365)
T 1taz_A 85 IHAADVTQTVHCFLLRTG-MVH----------CLSEIELLAIIFAAAIHDYEH 126 (365)
T ss_dssp HHHHHHHHHHHHHHHHHS-GGG----------GSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHhhh-HHh----------hCCHHHHHHHHHHHHHhcCCC
Confidence 688888877655543321 111 267778899999999999995
No 107
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=60.25 E-value=12 Score=39.90 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=41.7
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeecc---CCCCc------CC--CCCHHHH-HHHHHHHHHHHHHHH
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILG---RDLSS------SC--SISTQSQ-ARSVESLLMFRDIIQ 80 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg---~~~~~------~g--~ls~e~i-~~~~~~L~~f~~~~~ 80 (519)
+++..||+|+.|+|..+++.+ +|.+ +.....+...+ ..... .| .-+++.+ +.+++++++. ++
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~-~G~i--~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~---l~ 78 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLS-NGQE--LADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAV---MK 78 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETT-TCCE--EEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHH---HH
T ss_pred CEEEEEecCCcceEEEEEECC-CCeE--EEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHH---HH
Confidence 468899999999999999752 4654 33333332210 00000 11 2244444 6666666554 44
Q ss_pred HcCCCCccEEEEEehh
Q 010059 81 SHNISRDHTRAVATAA 96 (519)
Q Consensus 81 ~~~v~~~~i~~vATsA 96 (519)
+.++++.+|.+|+-++
T Consensus 79 ~~~~~~~~I~~Igis~ 94 (572)
T 3jvp_A 79 ESGVDADDVIGIGVDF 94 (572)
T ss_dssp C---CCSCEEEEEEEE
T ss_pred HcCCChhHEEEEEEec
Confidence 4456556788877443
No 108
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=59.66 E-value=10 Score=33.97 Aligned_cols=42 Identities=19% Similarity=0.185 Sum_probs=27.9
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccc
Q 010059 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF 414 (519)
Q Consensus 360 ~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~ 414 (519)
.+|+.+|+.+|..|-+..+.... .. +...+..+|+|||++-.
T Consensus 34 aeHs~rVa~~A~~la~~~~~~~~----------~~---d~~~v~~~aLlHD~~E~ 75 (177)
T 2cqz_A 34 ADHSFGVAFITLVLADVLEKRGK----------RI---DVEKALKMAIVHDLAEA 75 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC----------CC---CHHHHHHHHHHTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC----------CC---CHHHHHHHHHHhchHHH
Confidence 38999999999877654322211 12 33456689999999744
No 109
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=57.95 E-value=24 Score=35.32 Aligned_cols=42 Identities=12% Similarity=0.112 Sum_probs=28.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|...+-.+... . ++.. .+++.+..-+-+||+.||+|.
T Consensus 103 ~HA~dV~q~~~~ll~~---~-~l~~-------~l~~le~~alliAAl~HDv~H 144 (359)
T 2r8q_A 103 YHVVDVCQTLHTYLYT---G-KASE-------LLTELECYVLLVTALVHDLDH 144 (359)
T ss_dssp HHHHHHHHHHHHHHHT---S-CGGG-------GSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHc---c-cchh-------cccHHHHHHHHHHHHHhcCCC
Confidence 6888887765544321 1 1111 267778899999999999995
No 110
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=57.66 E-value=14 Score=38.69 Aligned_cols=25 Identities=24% Similarity=0.360 Sum_probs=19.1
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEE
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFL 39 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~ 39 (519)
+++..||+|+.|+|..+++ .+|++.
T Consensus 6 ~~~lgIDiGTts~Ka~l~d--~~G~i~ 30 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWD--LDGRML 30 (482)
T ss_dssp --CEEEEECSSEEEEEEEC--TTSCEE
T ss_pred ceEEEEEcCCCCeEEEEEE--CCCcEE
Confidence 3688999999999999996 356543
No 111
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=57.33 E-value=3.6 Score=38.71 Aligned_cols=25 Identities=20% Similarity=0.395 Sum_probs=21.0
Q ss_pred HHHHHHHHhhhhccccCCCchhhhh
Q 010059 400 EYLEAACLLHNIGHFTSKKGYHKQS 424 (519)
Q Consensus 400 ~lL~~Aa~LhdiG~~I~~~~h~~Hs 424 (519)
..+.+||+|||+|.-+...+|.+|+
T Consensus 79 dw~~laaLlHDLGkll~~~~~~qW~ 103 (250)
T 2ibn_A 79 DWFHLVGLLHDLGKVLALFGEPQWA 103 (250)
T ss_dssp HHHHHHHHHTTGGGHHHHTTCCGGG
T ss_pred hHHHHHHHHhccHhhhcccCCcchh
Confidence 5799999999999988777777664
No 112
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=56.21 E-value=57 Score=31.10 Aligned_cols=129 Identities=10% Similarity=0.145 Sum_probs=66.6
Q ss_pred EEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEe
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (519)
+-+||||-.++++-+++ ++. ++...+.. ... .-+.+.. ...+.++++.++++..++..++=
T Consensus 2 lL~IDIGNT~ik~gl~~---~~~--l~~~~r~~----T~~----~~t~de~------~~~l~~ll~~~~~~~~~i~~iiI 62 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE---EGE--LRQHWRME----TDR----HKTEDEY------GMLVKQLLEHEGLSFEDVKGIIV 62 (268)
T ss_dssp EEEEEECSSEEEEEEEE---TTE--EEEEEEEE----CCT----TCCHHHH------HHHHHHHHHHTTCCGGGCCEEEE
T ss_pred EEEEEECcCcEEEEEEE---CCE--EEEEEEec----CCC----cCCHHHH------HHHHHHHHHHcCCCcccCcEEEE
Confidence 45899999999999985 232 33333322 221 1123322 22334555666654333433333
Q ss_pred hhhhhcCChHHHHHHHHHHhCCceEeeChHHH----------------HHHHHhhhhccCCCCCCceEEEEECCCceEEE
Q 010059 95 AAVRAAENKDEFVECVREKVGFEVDVLTGEQE----------------AKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (519)
Q Consensus 95 sA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eE----------------A~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~ 158 (519)
+.+.- .-...+.+.+++..+.++.+++.... --....|+.... ..+.+|+|.|...|==.
T Consensus 63 SSVvp-~~~~~l~~~~~~~~~~~~~~v~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~~---~~~~iVVD~GTAtT~d~ 138 (268)
T 2h3g_X 63 SSVVP-PIMFALERMCEKYFKIKPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHLY---GSPLIIVDFGTATTYCY 138 (268)
T ss_dssp EESCH-HHHHHHHHHHHHHTCCCCEECSTTCCCCCEECSSCGGGSCHHHHHHHHHHHHHH---CSSEEEEEESSEEEEEE
T ss_pred EccCh-hHHHHHHHHHHHHhCCCeEEEcCCCCCCccccCCChhhcCHHHHHHHHHHHHhc---CCCEEEEECCCceEEEE
Confidence 33321 12234555566667888877742110 011222332222 24689999999988444
Q ss_pred EeeCCeEe
Q 010059 159 IGKRGKVV 166 (519)
Q Consensus 159 ~~~~~~~~ 166 (519)
+-.+|+..
T Consensus 139 v~~~g~~l 146 (268)
T 2h3g_X 139 INEEKHYM 146 (268)
T ss_dssp ECTTSEEE
T ss_pred ECCCCcEE
Confidence 43556554
No 113
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...
Probab=55.65 E-value=29 Score=34.54 Aligned_cols=42 Identities=21% Similarity=0.252 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|...+-.+.... ++.. .+++.+..-+-+||+.||+|.
T Consensus 104 ~HA~dV~q~~~~ll~~~----~l~~-------~l~~le~~alliAAl~HDv~H 145 (347)
T 1tbf_A 104 RHAFNTAQCMFAALKAG----KIQN-------KLTDLEILALLIAALSHDLDH 145 (347)
T ss_dssp HHHHHHHHHHHHHHHTT----CCGG-------GSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHcc----cccc-------cCCHHHHHHHHHHHHHccCCC
Confidence 68888877765554321 1111 267788899999999999995
No 114
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=55.22 E-value=23 Score=35.71 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|...+-.|.... .+.. .+++.+..-+-+||+.||+|.
T Consensus 86 ~HA~dV~q~~~~ll~~~-~l~~----------~l~~le~~alliAAl~HDvdH 127 (377)
T 1f0j_A 86 LHAADVAQSTHVLLSTP-ALDA----------VFTDLEILAAIFAAAIHDVDH 127 (377)
T ss_dssp HHHHHHHHHHHHHHTCG-GGTT----------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHhcc-hhhh----------hCCHHHHHHHHHHHHHcCCCC
Confidence 68888887765444211 1111 267778889999999999995
No 115
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=53.51 E-value=65 Score=32.18 Aligned_cols=133 Identities=17% Similarity=0.123 Sum_probs=72.9
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEee-eeeeeccCCCCcCCCCCH-HHHHHHHH---HHHHHHHHHHHcCCCCc
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTL-KQPVILGRDLSSSCSIST-QSQARSVE---SLLMFRDIIQSHNISRD 87 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~-k~~vrLg~~~~~~g~ls~-e~i~~~~~---~L~~f~~~~~~~~v~~~ 87 (519)
..+..||||...+++.+++ + |. ++.+. +.++.- . ++ +.++.+.+ .++++. + ..+
T Consensus 9 ~~~lgiDIGgt~i~~~l~d-~--G~--il~~~~~~~~~~--------~-~~~~~l~~i~~~~~~i~~~~---~-~~i--- 67 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ-G--GK--EIADPVVLPACA--------D-CLDKCLGNLVEGFKAIQAGL---P-EAP--- 67 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE-T--TE--ECSCCEEEECCT--------T-CHHHHHHHHHHHHHHHHTTC---S-SCC---
T ss_pred CEEEEEEECcceEEEEEEE-C--CE--EEEEEEEEECCC--------C-CHHHHHHHHHHHHHHHHHHh---h-cCC---
Confidence 5688999999999999996 4 43 34333 333211 1 22 33333333 222221 1 122
Q ss_pred cEEEEEehhh--------hhcCCh------HHHHHHHHHHhCCceEeeChHHHHHHHH--hhhh----cc-----CCCCC
Q 010059 88 HTRAVATAAV--------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVL----QF-----LPVFD 142 (519)
Q Consensus 88 ~i~~vATsA~--------R~A~N~------~~f~~~i~~~tG~~i~iIsg~eEA~l~~--~gv~----~~-----~~~~~ 142 (519)
.-.++|.... ..+.|- -.+.+.+++++|++|.+.+.-.=+-+.- +|.. .. -....
T Consensus 68 ~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~ 147 (366)
T 3mcp_A 68 VAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRY 147 (366)
T ss_dssp CEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCC
T ss_pred eEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHHHHHhCCCcccccccccccccCCC
Confidence 2244554332 334453 2466788999999999998766555442 2300 00 11123
Q ss_pred CceEEEEECCCceEEEEeeCCeEee
Q 010059 143 RLVLSVDIGGGSTEFVIGKRGKVVF 167 (519)
Q Consensus 143 ~~~lv~DIGGGStEl~~~~~~~~~~ 167 (519)
++.+++-+|.| +--.++-+|++..
T Consensus 148 ~~~v~l~lGtG-IG~givi~G~l~~ 171 (366)
T 3mcp_A 148 KNLLGVTLGTG-FGAGVVIDGELLR 171 (366)
T ss_dssp CEEEEEEESSS-EEEEEEETTEECC
T ss_pred CcEEEEEECCc-ceEEEEECCEEec
Confidence 46788888876 4445556777654
No 116
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=52.27 E-value=67 Score=30.56 Aligned_cols=125 Identities=13% Similarity=0.074 Sum_probs=67.9
Q ss_pred EEEEEecccceeeeEEEEeCCCCEEEEEeeeeee-eccC-CCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPV-ILGR-DLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~v-rLg~-~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~v 92 (519)
+..||+|..++|..+++ + |. ++.+.+.+. .... +. ++.++++.+.+++.. ....+. -.++
T Consensus 2 ~lgiDiGGT~i~~~l~d-~--g~--il~~~~~~~~~~~~~~~-------~~~~~~i~~~i~~~~---~~~~i~---~igi 63 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-N--GA--VIKRLGTKGINPFFQSE-------EEIQQKLTASLLPQL---PEGKFN---AVYF 63 (291)
T ss_dssp --CEECCTTCEEEEEEC-S--SS--EEEEEEECCCCTTTSCS-------TTTTTTTTC-------------------CEE
T ss_pred EEEEEeccccEEEEEEc-C--Ce--EEEEEECCCCCcccCCH-------HHHHHHHHHHHHHhc---Cccccc---EEEE
Confidence 46799999999999986 4 44 344433321 1100 11 111222222222221 111231 2456
Q ss_pred EehhhhhcCChHHHHHHHHHHhCC--ceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCceEEEEeeCCeEe
Q 010059 93 ATAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (519)
Q Consensus 93 ATsA~R~A~N~~~f~~~i~~~tG~--~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGStEl~~~~~~~~~ 166 (519)
++...- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||--..+..+|++.
T Consensus 64 g~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~------g--~~~~v~v~~GTGi~g~gi~~~G~~~ 130 (291)
T 1zxo_A 64 YGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC------G--QKAGIACILGTGSNSCFYNGKEIVS 130 (291)
T ss_dssp ECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT------T--TSCBEEEEESSSEEEEEECSSSEEE
T ss_pred EcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc------C--CCCcEEEEeCCChheEEECCCCcEE
Confidence 677653 45556788888999994 9999888776555432 2 2346777799999545555677764
No 117
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=49.48 E-value=69 Score=27.29 Aligned_cols=86 Identities=15% Similarity=0.246 Sum_probs=55.6
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (519)
++-.||.|+-.|=+.|.+.. ...-.++.-.+.. ... ..+..+.++++++++. -.+||
T Consensus 4 ~iLglD~G~kriGvAvsd~~-~~~A~pl~ti~~~-----~~~--------------~~~~~l~~li~e~~v~---~iVvG 60 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI-TGTARPLPAIKAQ-----DGT--------------PDWNIIERLLKEWQPD---EIIVG 60 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT-TTEEEEEEEEEEE-----TTE--------------ECHHHHHHHHHHHCCS---EEEEE
T ss_pred eEEEEEeCCCEEEEEEEcCC-CCEEeeEEEEEcC-----Ccc--------------hHHHHHHHHHHHcCCC---EEEEe
Confidence 47899999999988888542 2333344333221 100 1245667778888885 45676
Q ss_pred -------ehhhhhcCChHHHHHHHHHHhCCceEeeCh
Q 010059 94 -------TAAVRAAENKDEFVECVREKVGFEVDVLTG 123 (519)
Q Consensus 94 -------TsA~R~A~N~~~f~~~i~~~tG~~i~iIsg 123 (519)
|..- .|.-...|.++++.+++++|...+.
T Consensus 61 lP~~mdGt~~~-~~~~~~~f~~~L~~~~~lpV~~~DE 96 (138)
T 1nu0_A 61 LPLNMDGTEQP-LTARARKFANRIHGRFGVEVKLHDE 96 (138)
T ss_dssp EEECTTSCBCH-HHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cccCCCcCcCH-HHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 3322 2344578999999999999988774
No 118
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=49.25 E-value=16 Score=36.53 Aligned_cols=72 Identities=10% Similarity=0.057 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcccc--C-------------------CCc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT--S-------------------KKG 419 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I--~-------------------~~~ 419 (519)
.||..|...+-.+.... ++.. .+++.+..-+-+||+.||+|..= | ..+
T Consensus 86 ~HA~dV~q~~~~ll~~~-~l~~----------~l~~le~~alliAAl~HDv~HpG~nN~fli~~~s~LA~lYnd~SvLEn 154 (353)
T 1zkl_A 86 VHAADVTQAMHCYLKEP-KLAN----------SVTPWDILLSLIAAATHDLDHPGVNQPFLIKTNHYLATLYKNTSVLEN 154 (353)
T ss_dssp HHHHHHHHHHHHHHTSH-HHHT----------TCCHHHHHHHHHHHHHTTTTCCSSCHHHHHHTTCHHHHHTTTSSHHHH
T ss_pred HHHHHHHHHHHHHHhhh-HHhh----------hCCHHHHHHHHHHHHHhccCCCCCCcHHHHhcCCHHHHHcCCCCHHHH
Confidence 68888877665443211 1111 26777889999999999999521 0 112
Q ss_pred -hhhhhHHHHHcCCCCCCCCHHHHH
Q 010059 420 -YHKQSCHIIMNGDHLYGYSTDEIK 443 (519)
Q Consensus 420 -h~~Hs~yiI~ns~~l~G~s~~E~~ 443 (519)
|...++.|+...+-+.+++.+|+.
T Consensus 155 hH~a~a~~iL~~~ni~~~l~~~~~~ 179 (353)
T 1zkl_A 155 HHWRSAVGLLRESGLFSHLPLESRQ 179 (353)
T ss_dssp HHHHHHHHHHHHHTTTTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCccccCCHHHHH
Confidence 334455666544424578887755
No 119
>3v93_A Cyclic nucleotide specific phosphodiesterase; parasite, phosphodiesterases,, hydrolase; 2.00A {Trypanosoma cruzi} PDB: 3v94_A*
Probab=47.86 E-value=40 Score=33.57 Aligned_cols=43 Identities=12% Similarity=0.087 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|....-.+.....++.. .+++-+..-+-+||+.||+|.
T Consensus 102 ~HA~dV~q~~~~ll~~~~~~~~----------~l~~le~~alliAAl~HDvdH 144 (345)
T 3v93_A 102 IHAADVLQGTFSLVSAAKPLME----------HLTPLECKAAAFAALTHDVCH 144 (345)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHH----------HCCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHhchHhhh----------cCCHHHHHHHHHHHHHhcCCC
Confidence 6888888877666554332211 256778889999999999996
No 120
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=46.20 E-value=2e+02 Score=27.25 Aligned_cols=127 Identities=19% Similarity=0.223 Sum_probs=72.2
Q ss_pred EEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCCccEEEEE
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHTRAVA 93 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~-~v~~~~i~~vA 93 (519)
+..||||..++++.+++. +|. ++.+.+.++. . . +. +..++.+..+ +++. .+ .-.++|
T Consensus 6 ~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~---~--~----~~---~~~~~~i~~~---~~~~~~i---~gigi~ 63 (297)
T 4htl_A 6 IAAFDIGGTALKMGVVLP--HGE--IILTKSAEIS---G--S----DG---DQILAEMKVF---LAENTDV---TGIAVS 63 (297)
T ss_dssp EEEEEECSSEEEEEEECT--TSC--EEEEEEEECS---T--T----CH---HHHHHHHHHH---HHTCTTC---CEEEEE
T ss_pred EEEEEeCCCeEEEEEECC--CCC--EEEEEEecCC---C--C----CH---HHHHHHHHHH---HhhcCCe---eEEEEe
Confidence 789999999999999864 354 3444443321 1 1 12 2233333332 2222 22 224455
Q ss_pred ehhh--------hhcCCh-----HHHHHHHHHHhCCceEeeChHHHHHHHH--hhhhccCCCCCCceEEEEECCCceEEE
Q 010059 94 TAAV--------RAAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (519)
Q Consensus 94 TsA~--------R~A~N~-----~~f~~~i~~~tG~~i~iIsg~eEA~l~~--~gv~~~~~~~~~~~lv~DIGGGStEl~ 158 (519)
.... ..+.|- -.+.+.+++++|++|.+.+.-.=+-+.- +|... ..++.+++-+|.| +--.
T Consensus 64 ~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pV~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~g 138 (297)
T 4htl_A 64 APGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQ----DLDDFLCLTIGTG-IGGG 138 (297)
T ss_dssp ESSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEEE
T ss_pred cCcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHCcCEEEecHHHHHHHHHHHhCCCC----CCCcEEEEEECcc-eEEE
Confidence 4333 223332 2467888999999999988765544432 23221 2245899999987 4555
Q ss_pred EeeCCeEeee
Q 010059 159 IGKRGKVVFC 168 (519)
Q Consensus 159 ~~~~~~~~~~ 168 (519)
++-+|++...
T Consensus 139 iv~~G~l~~G 148 (297)
T 4htl_A 139 IFSNGELVRG 148 (297)
T ss_dssp EEETTEECCC
T ss_pred EEECCEEEec
Confidence 6668887653
No 121
>2e5n_A RNA polymerase II elongation factor ELL2; ELL_N2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.62 E-value=29 Score=27.94 Aligned_cols=53 Identities=17% Similarity=0.215 Sum_probs=37.2
Q ss_pred cCcchHHHHHHHHHhhhhcccc--CCCchhhhhHHHHHcCCCCCCCCHHHHHHHHHHH
Q 010059 394 FEDKDLEYLEAACLLHNIGHFT--SKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLT 449 (519)
Q Consensus 394 ~~~~~~~lL~~Aa~LhdiG~~I--~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~ia 449 (519)
++++++..| -++|.+|++.= +...+-+..+|-=.+-+ ++|+|..|+.++-.+.
T Consensus 41 l~~~d~~~l--~~iL~eVa~~~~~~~~y~Lk~~~~~eVq~d-Wp~Yte~erq~v~r~L 95 (100)
T 2e5n_A 41 VNQKDKNSL--GAILQQVANLNSKDLSYTLKDYVFKELQRD-WPGYSEIDRRSLESVL 95 (100)
T ss_dssp CCHHHHHHH--HHHHHHHEEEETTTTEEEECSTHHHHSCTT-CTTCCTTHHHHHHHHH
T ss_pred CCHHHHHHH--HHHHHHHHhcCCcCCeeehhHHHHHHhccC-CCCCCHHHHHHHHHHH
Confidence 344555544 45999999983 23344444577777888 9999999999887754
No 122
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=45.33 E-value=1.6e+02 Score=30.64 Aligned_cols=60 Identities=23% Similarity=0.262 Sum_probs=41.2
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHH
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDI 78 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~ 78 (519)
.|-+||+|-.++|..+++...++.+.++ ..+. ++-+.+.. |. .++-.+-..+++..|.+.
T Consensus 81 ~~LalDlGGTn~Rv~~V~l~g~~~~~~~-~~~~--~Ip~~~~~-~~-~~~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKLGGNHDFDTT-QNKY--RLPDHLRT-GT-SEQLWSFIAKCLKEFVDE 140 (485)
T ss_dssp EEEEEEESSSEEEEEEEEEESSSCEEEE-EEEE--ECCTTGGG-SB-HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCeEEEEEEEECCCCceEEE-EEEE--ecCchhcc-CC-HHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999765556654 2222 23333221 11 367788888889888764
No 123
>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A* 1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A* 1tbb_A* 1tb7_A* 3sl5_A* 3sl4_A* 2fm5_A* 3sl3_A* 2fm0_A* 3sl6_A* 3sl8_A* 1oyn_A* ...
Probab=44.88 E-value=22 Score=35.43 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=28.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|...+-.+.... .+.. .+++.+..-+-+||+.||+|.
T Consensus 99 ~HA~dV~q~~~~ll~~~-~l~~----------~l~~le~~alliAAl~HDv~H 140 (349)
T 1y2k_A 99 IHAADVVQSTHVLLSTP-ALEA----------VFTDLEILAAIFASAIHDVDH 140 (349)
T ss_dssp HHHHHHHHHHHHHHTCG-GGTT----------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHhhh-hHHh----------hcCHHHHHHHHHHHHhccCCC
Confidence 68888877765443211 1111 267778889999999999995
No 124
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=44.29 E-value=52 Score=34.53 Aligned_cols=26 Identities=35% Similarity=0.511 Sum_probs=20.6
Q ss_pred CceEEEEEecccceeeeEEEEeCCCCE
Q 010059 12 QTLFASIDMGTSSFKLLIIRAYPNGKF 38 (519)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~~~~~~~~~ 38 (519)
++++..||+|+.|+|..+++. .+|.+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~-~~G~i 29 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDA-ETGEL 29 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEET-TTCCE
T ss_pred CcEEEEEEeccccEEEEEEEC-CCCeE
Confidence 357899999999999999974 24653
No 125
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphoh structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; 2.10A {Escherichia coli} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=43.95 E-value=21 Score=32.56 Aligned_cols=46 Identities=11% Similarity=0.141 Sum_probs=30.2
Q ss_pred hhHHHHHHHHHHHHHHHH-hcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCCCc
Q 010059 361 KAGAQCASIAKDIFEGLR-KCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKG 419 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~-~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~~~ 419 (519)
+|+-+|+.+|..|-. +. +..+ .+-+...+..+|+|||+|..+-.+-
T Consensus 34 eHS~~VA~lA~~la~-~~~~~~~------------~~vD~~~~~~~aLlHDi~E~~~GDi 80 (201)
T 2paq_A 34 EHSLQVAMVAHALAA-IKNRKFG------------GNVNAERIALLAMYHDASEVLTGDL 80 (201)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHSC------------CCCCHHHHHHHHHHTTTTHHHHCCC
T ss_pred HHHHHHHHHHHHHHh-hhHHhcC------------cccCHHHHHHHHHhcccccccCCCC
Confidence 789899998886531 11 2221 0123566778899999998886653
No 126
>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 3mf0_A 3lfv_A 2xss_A 2k31_A*
Probab=42.78 E-value=44 Score=37.55 Aligned_cols=61 Identities=13% Similarity=0.151 Sum_probs=38.4
Q ss_pred hhhHHHHHHHHHHhcC-cc--cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhc
Q 010059 341 NARWRSVVRLAMRFNN-KK--RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIG 412 (519)
Q Consensus 341 ~~~~~s~~~~~~ry~~-~~--~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG 412 (519)
+...+-+..+...|+- ++ +-.||..|...+-.+.... ++.. .+++.+..-+-+||+.||+|
T Consensus 596 ~~l~~fl~~v~~~Y~~~~pyHN~~Ha~dV~q~~~~~l~~~-~~~~----------~~~~~e~~a~~~aa~~HD~~ 659 (878)
T 3bjc_A 596 EVLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAG-KIQN----------KLTDLEILALLIAALSHDLD 659 (878)
T ss_dssp HHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHHTT-CCGG----------GSCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHhcc-chhh----------cCCHHHHHHHHHHHHHccCC
Confidence 3444556666667762 22 2367777777665444321 1111 26778889999999999999
No 127
>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 3sn7_A* 3sni_A* 3snl_A* 4dff_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 4ael_A* 2y0j_A* 4ddl_A* 3uuo_A* 3ui7_A* 2o8h_A* 2ovv_A* 2ovy_A* ...
Probab=40.16 E-value=2.7e+02 Score=27.18 Aligned_cols=40 Identities=28% Similarity=0.381 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|...+-.+.... .. .+++.+..-+-+||+.||+|.
T Consensus 83 ~HA~dV~q~~~~ll~~~---~~----------~l~~le~~alliAAl~HDv~H 122 (331)
T 2our_A 83 KHAVTVAHCMYAILQNN---HT----------LFTDLERKGLLIACLCHDLDH 122 (331)
T ss_dssp HHHHHHHHHHHHHHHTT---GG----------GSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHhc---cc----------cCCHHHHHHHHHHHHHccCCC
Confidence 68888877665554332 11 267778889999999999994
No 128
>2doa_A RNA polymerase II elongation factor ELL; C19ORF17, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.81
Probab=38.93 E-value=25 Score=28.55 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=37.6
Q ss_pred CcchHHHHHHHHHhhhhccc--cCCCchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 010059 395 EDKDLEYLEAACLLHNIGHF--TSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTR 450 (519)
Q Consensus 395 ~~~~~~lL~~Aa~LhdiG~~--I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iar 450 (519)
+++|+..| -++|.+|++. =+...+-+..+|-=.+-+ ++|+|..||.++-.+..
T Consensus 41 ~~~d~~~l--~~iL~eVA~~~~~~~~y~Lk~~~y~eVq~d-Wp~Yte~erq~v~r~l~ 95 (104)
T 2doa_A 41 TQADKDAL--DGLLQQVANMSAKDGTCTLQDCMYKDVQKD-WPGYSEGDQQLLKRVLV 95 (104)
T ss_dssp CHHHHHHH--HHHHHHSSEECSSSCEEECCSSGGGGCCSC-CTTCCSHHHHHHHHHHH
T ss_pred CHHHHHHH--HHHHHHHHhcCCcCCeeeehHHHHHHhcCC-CCCCCHHHHHHHHHHHH
Confidence 44455544 4599999988 333444455566667887 99999999999887653
No 129
>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A
Probab=38.69 E-value=54 Score=32.56 Aligned_cols=42 Identities=17% Similarity=0.332 Sum_probs=29.8
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|...+-.+..... +.. .+++-+..-+-+||+.||+|.
T Consensus 85 ~HA~dV~q~~~~ll~~~~-l~~----------~l~~le~~alliAal~HDv~H 126 (345)
T 3itu_A 85 MHAFSVSHFCYLLYKNLE-LTN----------YLEDIEIFALFISCMCHDLDH 126 (345)
T ss_dssp HHHHHHHHHHHHHHHHHC-GGG----------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHhccc-hhh----------hhhHHHHHHHHHHHHHhcCCC
Confidence 688888887655543321 111 267778889999999999996
No 130
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=37.83 E-value=25 Score=34.77 Aligned_cols=25 Identities=32% Similarity=0.418 Sum_probs=22.2
Q ss_pred CceEEEEECCCceEEEEeeCCeEee
Q 010059 143 RLVLSVDIGGGSTEFVIGKRGKVVF 167 (519)
Q Consensus 143 ~~~lv~DIGGGStEl~~~~~~~~~~ 167 (519)
++++++||||=.|.|+.+.+|++..
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 3589999999999999999998854
No 131
>1miw_A TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus} SCOP: a.173.1.1 d.218.1.4 PDB: 1miv_A* 1miy_A*
Probab=36.22 E-value=24 Score=35.94 Aligned_cols=43 Identities=12% Similarity=0.095 Sum_probs=32.3
Q ss_pred HHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccC
Q 010059 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRK 454 (519)
Q Consensus 400 ~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k 454 (519)
.++.||++|||+|. +-...+. . =.+||.+++..++.++++|..
T Consensus 248 ~~l~~aaLlhdigk--------~~a~~~l-~---rLkls~~~~~~v~~Lv~~~~~ 290 (404)
T 1miw_A 248 REERWALLCHALGV--------QESRPFL-R---AWKLPNKVVDEAGAILTALAD 290 (404)
T ss_dssp HHHHHHHHHHHHTC--------SCHHHHH-H---HTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCH--------HHHHHHH-H---HcCCCHHHHHHHHHHHHHHHh
Confidence 45789999999996 1233333 2 268999999999999988764
No 132
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=34.19 E-value=1.1e+02 Score=29.62 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=41.1
Q ss_pred ceEEEEEecccceeeeEEEEeCCCCEEEEEeeee-eeeccCCCCcCCCCCHHHHHHHHHHHHH
Q 010059 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQ-PVILGRDLSSSCSISTQSQARSVESLLM 74 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~-~vrLg~~~~~~g~ls~e~i~~~~~~L~~ 74 (519)
....+||||..|+-+.+++ ++.+....+..- .|||-+..+.++..+++.++++.+.++.
T Consensus 131 ~~~lviDIGGGStEl~~~~---~~~~~~~~Sl~lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~ 190 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGN---KNEILWKQSFEIGGQRLIDRFHVHDPMREDDRVMMHNYFDE 190 (315)
T ss_dssp CCEEEEEECSSCEEEEEEC---SSCEEEEEEESCCHHHHHHHSCCCSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEEE---CCeEeeeEEEechhhHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999984 344433222222 2577777777788999888877766554
No 133
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=34.16 E-value=72 Score=27.40 Aligned_cols=59 Identities=12% Similarity=0.032 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHH
Q 010059 60 ISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEA 127 (519)
Q Consensus 60 ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA 127 (519)
.+.+.+..++ .+.++++|+....|.++||-.++. .+.-+-++-++.|++++..+.+|=+
T Consensus 22 ~~~~~i~~ai------~~aL~~~~l~~~~v~~latid~K~---dE~gL~~~A~~lg~pl~~~~~eeL~ 80 (145)
T 2w6k_A 22 CSAEHLRALL------ERTLGEHGRSLAELDALASIDGKR---DEPGLRQLATLLERPVHFLAPAVLH 80 (145)
T ss_dssp CCHHHHHHHH------HHHHHHTTCCGGGCCEEEEECSSS---CCHHHHHHHHHHTSCEEEECHHHHH
T ss_pred CCHHHHHHHH------HHHHHHcCCCHHHcceEechHHhC---CCHHHHHHHHHhCCCcEEeCHHHHh
Confidence 4566655433 445667888888899999986653 3345555667789999999877744
No 134
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=33.96 E-value=42 Score=32.06 Aligned_cols=30 Identities=10% Similarity=0.053 Sum_probs=26.7
Q ss_pred eEEEEECCCceEEEEeeCCeEeeeeeeehh
Q 010059 145 VLSVDIGGGSTEFVIGKRGKVVFCESVNLG 174 (519)
Q Consensus 145 ~lv~DIGGGStEl~~~~~~~~~~~~SlplG 174 (519)
.|++|||+-++-+.+++++++...++++-.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~ 33 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSK 33 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECS
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCC
Confidence 589999999999999999999988888743
No 135
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=33.08 E-value=90 Score=32.18 Aligned_cols=70 Identities=16% Similarity=0.322 Sum_probs=37.3
Q ss_pred EEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCCccEEE
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHTRA 91 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~l--s~-e~i~~~~~~L~~f~~~~~~~~v~~~~i~~ 91 (519)
+..||+|+.|+|..+++. +|.. +...+.+...- ....|.. ++ +-.+.+++++++.. ++.+. .+|.+
T Consensus 2 ~lgiDiGtt~~k~~l~d~--~g~~--l~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~~---~~~~~--~~i~~ 70 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE--QGEV--VAAQTEKLTVS--RPHPLWSEQDPEQWWQATDRAMKALG---DQHSL--QDVKA 70 (484)
T ss_dssp EEEEEECSSEEEEEEECT--TSCE--EEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHHH---HHSCC--TTCCE
T ss_pred EEEEEecCcccEEEEECC--CCCE--EEEEEeccccc--cCCCCCEeECHHHHHHHHHHHHHHHH---HhCCc--cceEE
Confidence 568999999999999964 4543 44443333221 1222222 23 44556666666543 33322 24555
Q ss_pred EEeh
Q 010059 92 VATA 95 (519)
Q Consensus 92 vATs 95 (519)
|+-+
T Consensus 71 Igis 74 (484)
T 2itm_A 71 LGIA 74 (484)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5543
No 136
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=31.70 E-value=41 Score=33.91 Aligned_cols=43 Identities=9% Similarity=0.020 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhcc
Q 010059 399 LEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHR 453 (519)
Q Consensus 399 ~~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~ 453 (519)
..++.+||+|||+|. +-...+.. =.+||.+++..++.++++|.
T Consensus 256 ~~~l~laaLlhdi~~--------~~a~~~~~----rL~ls~~~~~~v~~Lv~~h~ 298 (390)
T 1vfg_A 256 YGWLYLLILISNLDY--------ERGKHFLE----EMSAPSWVRETYKFMKFKLG 298 (390)
T ss_dssp HHHHHHHHHHCSCCS--------STTHHHHH----HTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHccCCH--------HHHHHHHH----HcCCCHHHHHHHHHHHHHHH
Confidence 468999999999995 11222332 26799999999999998774
No 137
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=30.92 E-value=33 Score=35.62 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=19.0
Q ss_pred CceEEEEEecccceeeeEEEEe
Q 010059 12 QTLFASIDMGTSSFKLLIIRAY 33 (519)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~~~~ 33 (519)
.+.+..||+|+.|+|..+++.+
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEEec
Confidence 3468899999999999999864
No 138
>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; phophodiestrase, enzyme mechanism, hydrolase, manganes binding, phosphoprotein; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A* 4gh6_A* 3n3z_A*
Probab=30.42 E-value=75 Score=31.31 Aligned_cols=42 Identities=17% Similarity=0.219 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|...+-.+.... ++.. .+++-+...+-+||+.||+|.
T Consensus 78 ~Ha~dV~q~~~~~l~~~-~l~~----------~l~~le~~alliAal~HDv~H 119 (329)
T 3dyn_A 78 RHCFCVAQMMYSMVWLC-SLQE----------KFSQTDILILMTAAICHDLDH 119 (329)
T ss_dssp HHHHHHHHHHHHHHHHT-THHH----------HSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHhHHHHHHHHHHHhh-hHhh----------cCCHHHHHHHHHHHHHhcCCC
Confidence 68888777655443221 1111 256678888999999999995
No 139
>3qi3_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; mutation, glutamine switch, hydrolase-hydrolase inhibitor CO; HET: PDB; 2.30A {Homo sapiens} PDB: 3qi4_A*
Probab=27.71 E-value=99 Score=32.55 Aligned_cols=42 Identities=17% Similarity=0.219 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|....-.+.... .+.. .+++-+...+-+||+.||+|.
T Consensus 255 ~HA~DV~Q~~~~ll~~~-~l~~----------~ls~lE~lAlliAAl~HDvdH 296 (533)
T 3qi3_A 255 RHCFCVAQMMYSMVWLC-SLQE----------KFSQTDILILMTAAICHDLDH 296 (533)
T ss_dssp HHHHHHHHHHHHHHHHT-TGGG----------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHhHHHHHHHHHHHhc-cchh----------hccHHHHHHHHHHHHHhccCC
Confidence 68888877654443221 2211 267778888999999999985
No 140
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=27.50 E-value=84 Score=30.59 Aligned_cols=58 Identities=17% Similarity=0.135 Sum_probs=38.7
Q ss_pred CceEEEEEecccceeeeEEEEeCCCCEEEEEeeeee---eeccCCCCcCCCCCHHHHHHHHHHHHH
Q 010059 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQP---VILGRDLSSSCSISTQSQARSVESLLM 74 (519)
Q Consensus 12 ~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~---vrLg~~~~~~g~ls~e~i~~~~~~L~~ 74 (519)
.....+||||..|+-+.+++ ++.+ +.....+ +||-+..+.++..+++.++++.+.++.
T Consensus 137 ~~~~lvvDIGGGStEl~~~~---~~~~--~~~~Sl~~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~ 197 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGK---GYKV--REVISLPIGIVNLTETFFKQDPPTEEEVKRFFEFLEK 197 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEE---TTEE--EEEEEECCCHHHHHHHHCCSSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEEe---CCce--eeEEEEeccHHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 34589999999999999974 3433 3333333 455566666677888877766655554
No 141
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=27.20 E-value=1.4e+02 Score=30.63 Aligned_cols=60 Identities=17% Similarity=0.133 Sum_probs=38.8
Q ss_pred ceEEEEEecccceeeeEEEEeC-CCCEEE-EEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHH
Q 010059 13 TLFASIDMGTSSFKLLIIRAYP-NGKFLT-IDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDI 78 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~~~-~~~~~~-i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~ 78 (519)
-.|-+||+|-.++|..+++... ++.+.+ ..+.+ +-..+.. + =.++-.+...+++..|.+.
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~~----ip~~~~~-~-~~~~lfd~Ia~~i~~~l~~ 129 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTYC----IPAEKMS-G-SGTELFKYIAETLADFLEN 129 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEEC----CCTTTTT-S-BHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEEe----cCCcccC-C-CHHHHHHHHHHHHHHHHHh
Confidence 4688999999999999999864 343444 22222 2222111 1 1356778888999988753
No 142
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=25.96 E-value=99 Score=30.52 Aligned_cols=58 Identities=10% Similarity=0.260 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHH
Q 010059 58 CSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKF 129 (519)
Q Consensus 58 g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l 129 (519)
...+.+.+..+++ +.++++|+.+..|.++||-.+. +.++-++.|++++..|.+|=+..
T Consensus 218 rg~~~~~i~~ai~------~aL~~~~l~~~~v~~iasid~K--------L~~~A~~l~~pl~~~~~eeL~~v 275 (336)
T 3eeq_A 218 KDVKMEEIRDGIY------KVLERLNLKRERIGIIASIREE--------VKKIADEFNVRFRLVNEEEINNF 275 (336)
T ss_dssp SSCCHHHHHHHHH------HHHHHHTCCGGGEEEEEESCTT--------HHHHHHHHTCEEEECCHHHHHTC
T ss_pred CCCCHHHHHHHHH------HHHHHcCCCHHHhhEEEcHHHH--------HHHHHHHhCCCEEEeCHHHHhhc
Confidence 3456666654433 3455678888889999998775 66666788999999999886653
No 143
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=25.96 E-value=1.3e+02 Score=23.87 Aligned_cols=83 Identities=17% Similarity=0.260 Sum_probs=54.2
Q ss_pred EEEEEecccceeeeEEEEeCCCCE-EEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 010059 15 FASIDMGTSSFKLLIIRAYPNGKF-LTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (519)
Q Consensus 15 ~AvIDIGSNsirL~I~~~~~~~~~-~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (519)
+-.||.|+-.|=+.+.+- .+.+ .++.-.+. +. . -..+....+++++|++. -.+||
T Consensus 3 iLglD~G~kriGvAvsd~--~~~~A~pl~ti~~-----~~-----------~---~~~~~~l~~li~e~~v~---~iVvG 58 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE--GVPLASGRGYLVR-----KT-----------L---EEDVEALLDFVRREGLG---KLVVG 58 (98)
T ss_dssp EEEEEESSSEEEEEEECS--CCSSCCCEEEEEC-----CC-----------H---HHHHHHHHHHHHHHTCC---EEEEE
T ss_pred EEEEEeCCCEEEEEEEeC--CCCeeeeeEEEEc-----cC-----------c---HHHHHHHHHHHHHcCCC---EEEEe
Confidence 678999999998888753 2321 22221110 10 1 14456777788889885 45677
Q ss_pred -------ehhhhhcCChHHHHHHHHHHhCCceEeeCh
Q 010059 94 -------TAAVRAAENKDEFVECVREKVGFEVDVLTG 123 (519)
Q Consensus 94 -------TsA~R~A~N~~~f~~~i~~~tG~~i~iIsg 123 (519)
|.. ..|.-...|.++++.+ +++|...+.
T Consensus 59 lP~~mdGt~~-~~~~~~~~f~~~L~~~-~lpV~~~DE 93 (98)
T 1iv0_A 59 LPLRTDLKES-AQAGKVLPLVEALRAR-GVEVELWDE 93 (98)
T ss_dssp CCCCCCSSSC-CCSSTTHHHHHHHHHT-TCEEEEECC
T ss_pred eccCCCCCcC-HHHHHHHHHHHHHhcC-CCCEEEECC
Confidence 332 4567788999999998 999987763
No 144
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=25.94 E-value=55 Score=27.42 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECC
Q 010059 103 KDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGG 152 (519)
Q Consensus 103 ~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGG 152 (519)
..+|.+.+..-+|+.|+.++. .++. +.+....++++.+++|..|
T Consensus 31 s~eFReav~~LlGykId~~~~---~~~r---l~S~Ya~~~~d~L~F~~~~ 74 (123)
T 4dzo_A 31 IQEFRKACYTLTGYQIDITTE---NQYR---LTSLYAEHPGDCLIFKATS 74 (123)
T ss_dssp HHHHHHHHHHHHSEEEEEETT---TEEE---EEETTCSSTTCCEEEEECC
T ss_pred HHHHHHHHHHHhCeEEEEccC---CeEE---EEEeecCCCCCeEEEEecC
Confidence 468999999999999999964 2222 2222222334589999865
No 145
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=25.61 E-value=45 Score=34.06 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=20.1
Q ss_pred cccccccCCCceEEEEEecccceeeeEEEEe
Q 010059 3 TNTSYMQIPQTLFASIDMGTSSFKLLIIRAY 33 (519)
Q Consensus 3 ~~~~~~~~~~~~~AvIDIGSNsirL~I~~~~ 33 (519)
+|-|-..|+++++=||.-||.|+++.+++..
T Consensus 9 ~~gm~~~Ms~klILviN~GSSS~K~~lf~~~ 39 (415)
T 3sk3_A 9 HHGMASHMSSKLVLVLNCGSSSLKFAIIDAV 39 (415)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEETT
T ss_pred cccccccCCCCeEEEEeCchHhhhheeEECC
Confidence 4555566788889999999999999999854
No 146
>1ou5_A TRNA CCA-adding enzyme, tRNA-nucleotidyltransferase; polymerase, translation; 3.40A {Homo sapiens} SCOP: a.173.1.1 d.218.1.4
Probab=25.07 E-value=15 Score=38.13 Aligned_cols=41 Identities=10% Similarity=0.022 Sum_probs=31.7
Q ss_pred HHHHHHHHhhhhccccCCCchhhhhHHHHHcCCCCCCCCHHHHHHHHHHHHhccC
Q 010059 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKLIALLTRFHRK 454 (519)
Q Consensus 400 ~lL~~Aa~LhdiG~~I~~~~h~~Hs~yiI~ns~~l~G~s~~E~~~iA~iaryh~k 454 (519)
.++.+||+|||+|. ...+. . =.+||.+++..+..++++|..
T Consensus 306 ~~l~lAaLlhDi~k----------a~~i~-~---rLkls~~~~~~v~~Lv~~h~~ 346 (448)
T 1ou5_A 306 PVTLLASLFKVQDD----------VTKLD-L---RLKIAKEEKNLGLFIVKNRKD 346 (448)
T ss_dssp HHHHHGGGCCSTTT----------THHHH-H---HHCCCTTHHHHHHHHTTTTTT
T ss_pred HHHHHHHHhcChHH----------HHHHH-H---HcCCCHHHHHHHHHHHHHHHH
Confidence 47899999999985 22222 2 268999999999999998864
No 147
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=24.62 E-value=15 Score=36.49 Aligned_cols=73 Identities=15% Similarity=0.236 Sum_probs=37.4
Q ss_pred HHHHcCCCCccEEEEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHHHHHHHhhhhccCCCCCCceEEEEECCCce
Q 010059 78 IIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (519)
Q Consensus 78 ~~~~~~v~~~~i~~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eEA~l~~~gv~~~~~~~~~~~lv~DIGGGSt 155 (519)
.++.+|.+ ++.+|....+.+ ...+.+.+.++ +.|+++.+.++..+..+...--...+. ..+.-+|+=+||||+
T Consensus 28 ~l~~~g~~--~~livtd~~~~~-~~~~~v~~~L~-~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~~~d~IIavGGGsv 100 (354)
T 3ce9_A 28 IIKKGNFK--RVSLYFGEGIYE-LFGETIEKSIK-SSNIEIEAVETVKNIDFDEIGTNAFKI-PAEVDALIGIGGGKA 100 (354)
T ss_dssp HHGGGTCS--EEEEEEETTHHH-HHHHHHHHHHH-TTTCEEEEEEEECCCBHHHHHHHHTTS-CTTCCEEEEEESHHH
T ss_pred HHHhcCCC--eEEEEECccHHH-HHHHHHHHHHH-HcCCeEEEEecCCCCCHHHHHHHHHhh-hcCCCEEEEECChHH
Confidence 34445653 577777666654 23444444443 358888777632222221111112121 123358999999986
No 148
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=23.28 E-value=89 Score=32.73 Aligned_cols=56 Identities=20% Similarity=0.068 Sum_probs=38.2
Q ss_pred eEEEEEecccceeeeEEEEeCCCCEEEEEeeeee---eeccCCCCcCCCCCHHHHHHHHHHHHH
Q 010059 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQP---VILGRDLSSSCSISTQSQARSVESLLM 74 (519)
Q Consensus 14 ~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~---vrLg~~~~~~g~ls~e~i~~~~~~L~~ 74 (519)
...+||||..|+-+.+++ ++.+ .....-+ |||-+..+.++.++++.++++.+.++.
T Consensus 138 ~~lviDIGGGStEl~~~~---~~~~--~~~~Sl~lG~vrlte~f~~~~~~~~~~~~~~~~~i~~ 196 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGE---NFEP--ILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQ 196 (513)
T ss_dssp CEEEEEECSSCEEEEEEE---TTEE--EEEEEESCCHHHHHHHHSGGGBCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEe---CCee--eEEEEEeccHHHHHHHHcccCCCCHHHHHHHHHHHHH
Confidence 478999999999999974 3433 3222222 456666667788899888887555443
No 149
>3ibj_A CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE2A, GAF-domains, allosteric regulation hydrolase, membrane; 3.02A {Homo sapiens}
Probab=22.83 E-value=1.4e+02 Score=32.23 Aligned_cols=58 Identities=14% Similarity=0.275 Sum_probs=35.7
Q ss_pred HHHHHHHHHhcCcc--cchhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 345 RSVVRLAMRFNNKK--RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 345 ~s~~~~~~ry~~~~--~~~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
+-+..+.+.|+-++ +-.||..|...+-.+.... ++.. .+++-+..-+-+||+.||+|.
T Consensus 428 ~fl~~v~~~y~~~pyHN~~Ha~dv~q~~~~~~~~~-~~~~----------~~~~~e~~a~~~aa~~HD~~H 487 (691)
T 3ibj_A 428 RFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNL-ELTN----------YLEDIEIFALFISCMCHDLDH 487 (691)
T ss_dssp HHHHHHHHTSBCCSSSBHHHHHHHHHHHHHHHHHH-TGGG----------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHhcCCCCCCcCcHHHHHHHHHHHHHHhcc-chhh----------hCCHHHHHHHHHHHHHccCCC
Confidence 34444555554221 2268888877665444322 1211 267778889999999999986
No 150
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=22.12 E-value=23 Score=36.03 Aligned_cols=73 Identities=19% Similarity=0.223 Sum_probs=39.2
Q ss_pred HHHHcCCCCccEEEEEe-hhhhhcCChHHHHHHHHHHhCCceEeeChHH-HHH--HHHhhhhccCCCCCCceEEEEECCC
Q 010059 78 IIQSHNISRDHTRAVAT-AAVRAAENKDEFVECVREKVGFEVDVLTGEQ-EAK--FVYMGVLQFLPVFDRLVLSVDIGGG 153 (519)
Q Consensus 78 ~~~~~~v~~~~i~~vAT-sA~R~A~N~~~f~~~i~~~tG~~i~iIsg~e-EA~--l~~~gv~~~~~~~~~~~lv~DIGGG 153 (519)
.++.+|.. ++.+|.. ..++...=.+.+.+.++ +.|+++.+.+|-+ +.. -...++..... . +.-+|+=||||
T Consensus 37 ~l~~~g~~--r~liVtd~~~~~~~g~~~~v~~~L~-~~g~~~~~f~~v~~~p~~~~v~~~~~~~~~-~-~~D~IIavGGG 111 (407)
T 1vlj_A 37 EIKNAGIR--KVLFLYGGGSIKKNGVYDQVVDSLK-KHGIEWVEVSGVKPNPVLSKVHEAVEVAKK-E-KVEAVLGVGGG 111 (407)
T ss_dssp HHHHTTCC--EEEEEECSSHHHHSSHHHHHHHHHH-HTTCEEEEECCCCSSCBHHHHHHHHHHHHH-T-TCSEEEEEESH
T ss_pred HHHHcCCC--eEEEEECchHHhhccHHHHHHHHHH-HcCCeEEEecCccCCCCHHHHHHHHHHHHh-c-CCCEEEEeCCh
Confidence 34445653 6777776 66766433455555554 4589998888721 111 11111111111 1 11389999999
Q ss_pred ce
Q 010059 154 ST 155 (519)
Q Consensus 154 St 155 (519)
|+
T Consensus 112 sv 113 (407)
T 1vlj_A 112 SV 113 (407)
T ss_dssp HH
T ss_pred hH
Confidence 96
No 151
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=21.15 E-value=2.9e+02 Score=25.60 Aligned_cols=134 Identities=11% Similarity=0.123 Sum_probs=0.0
Q ss_pred CCceEEEEEecccceeeeEEEEeCCCCEEEEEeeeeeeeccCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE
Q 010059 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (519)
Q Consensus 11 ~~~~~AvIDIGSNsirL~I~~~~~~~~~~~i~~~k~~vrLg~~~~~~g~ls~e~i~~~~~~L~~f~~~~~~~~v~~~~i~ 90 (519)
..+++-+||||=.++++-+++ ++.+..-.+......--.+ +-...+.++++. ...++.
T Consensus 1 ~~~M~L~IDIGNT~ik~gl~~---~~~l~~~~r~~T~~~~t~d----------------e~~~~l~~l~~~---~~~~i~ 58 (249)
T 3bex_A 1 MDPMYLLVDVGNTHSVFSITE---DGKTFRRWRLSTGVFQTED----------------ELFSHLHPLLGD---AMREIK 58 (249)
T ss_dssp CCCEEEEEEECSSEEEEEEES---SSSSCEEEEEECCTTCCHH----------------HHHHHHHHHHGG---GGGGEE
T ss_pred CCceEEEEEECCCeEEEEEEE---CCEEEEEEEecCCCCCCHH----------------HHHHHHHHHHhh---ccccCC
Q ss_pred EEEehhhhhcCChHHHHHHHHHHhCCceEeeChHHH-----HH-----------HHHhhhhccCCCCCCceEEEEECCCc
Q 010059 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQE-----AK-----------FVYMGVLQFLPVFDRLVLSVDIGGGS 154 (519)
Q Consensus 91 ~vATsA~R~A~N~~~f~~~i~~~tG~~i~iIsg~eE-----A~-----------l~~~gv~~~~~~~~~~~lv~DIGGGS 154 (519)
.++=+.+- ..-...+.+.+++..+.++.++ +..- .| ....|+.... .++.+|+|.|.+-
T Consensus 59 ~i~IsSVv-p~~~~~~~~~~~~~~~~~p~~v-~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~---~~~~iVvD~GTA~ 133 (249)
T 3bex_A 59 GIGVASVV-PTQNTVIERFSQKYFHISPIWV-KAKNGCVKWNVKNPSEVGADRVANVVAFVKEY---GKNGIIIDMGTAT 133 (249)
T ss_dssp EEEEEESC-HHHHHHHHHHHHHHHSCCCEEC-CCCSSSSEECSSCGGGSCHHHHHHHHHHHHHT---CSCEEEEEESSEE
T ss_pred EEEEEcCc-HHHHHHHHHHHHHhcCCCeEEE-EccCCCceeccCChhhcCHHHHHHHHHHHHHc---CCCEEEEEcCCce
Q ss_pred eEEEEeeCCeEeeeeeee
Q 010059 155 TEFVIGKRGKVVFCESVN 172 (519)
Q Consensus 155 tEl~~~~~~~~~~~~Slp 172 (519)
|==.+ .+|+..-..=.|
T Consensus 134 T~d~v-~~g~~lGG~I~P 150 (249)
T 3bex_A 134 TVDLV-VNGSYEGGAILP 150 (249)
T ss_dssp EEEEE-ETTEEEEEEEEE
T ss_pred EEEEE-eCCeEeeEEECc
No 152
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=20.60 E-value=1.3e+02 Score=29.54 Aligned_cols=61 Identities=11% Similarity=0.091 Sum_probs=40.4
Q ss_pred ceEEEEEecccceeeeEEEE--eCC-CCEEEEEeeeee---eeccCCCCcCCCCCHHHHHHHHHHHHHH
Q 010059 13 TLFASIDMGTSSFKLLIIRA--YPN-GKFLTIDTLKQP---VILGRDLSSSCSISTQSQARSVESLLMF 75 (519)
Q Consensus 13 ~~~AvIDIGSNsirL~I~~~--~~~-~~~~~i~~~k~~---vrLg~~~~~~g~ls~e~i~~~~~~L~~f 75 (519)
....+||||..|+-+.+++- ... +.+ .....-+ +||-+..+.++..+++.++++.+.++.-
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~--~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~~ 212 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQV--QGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEH 212 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSC--SEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEeecCccCccccc--ceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence 34789999999999999853 110 211 1122222 4566677777889999888877776653
No 153
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=20.44 E-value=1e+02 Score=29.26 Aligned_cols=28 Identities=11% Similarity=0.229 Sum_probs=24.6
Q ss_pred eEEEEECCCceEEEEeeCCeEeeeeeee
Q 010059 145 VLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (519)
Q Consensus 145 ~lv~DIGGGStEl~~~~~~~~~~~~Slp 172 (519)
.|++|||.-++-+.+++++++...+.++
T Consensus 2 lL~IDIGNT~ik~gl~~~~~l~~~~r~~ 29 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGELRQHWRME 29 (268)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEECcCcEEEEEEECCEEEEEEEec
Confidence 4889999999999999999988777665
No 154
>3ecm_A High affinity CAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A...; phosphodiesterase 8A PDE8A inhibitor selectivity; 1.90A {Homo sapiens} SCOP: a.211.1.0 PDB: 3ecn_A*
Probab=20.40 E-value=67 Score=31.76 Aligned_cols=42 Identities=12% Similarity=0.153 Sum_probs=27.7
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhcc
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~ 413 (519)
.||..|....-.+.... ++.. .+++-+..-+-+||+.||+|.
T Consensus 78 ~Ha~dV~q~~~~~l~~~-~l~~----------~l~~~e~~all~Aal~HD~~H 119 (338)
T 3ecm_A 78 THSADVLHATAYFLSKE-RIKE----------TLDPIDEVAALIAATIHDVDH 119 (338)
T ss_dssp HHHHHHHHHHHHHHTSH-HHHT----------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHhc-chhh----------hhhHHHHHHHHHHHHHhccCC
Confidence 68888877654333211 1111 256778888999999999995
No 155
>1xx7_A Oxetanocin-like protein; PSI, secsg, protein structure initiative, southeast collaboratory for structural genomics; 2.26A {Pyrococcus furiosus} SCOP: a.211.1.1
Probab=20.29 E-value=1.1e+02 Score=27.33 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhcccCcchHHHHHHHHHhhhhccccCCC
Q 010059 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKK 418 (519)
Q Consensus 361 ~ha~~V~~~a~~lfd~l~~~~~l~~~~~~~~~~~~~~~~~lL~~Aa~LhdiG~~I~~~ 418 (519)
+|+-+|+-+|..|-+.. +.++. .++. + + +-..|++||++-.+--+
T Consensus 40 eHS~~vA~ia~~la~~~-~~~~~---------~~d~-~-r-~~~~aL~HDl~E~~~GD 84 (184)
T 1xx7_A 40 DHSYRVAFITLLLAEEL-KKKGV---------EIDV-E-K-ALKIAIIHDLGEAIITD 84 (184)
T ss_dssp HHHHHHHHHHHHHHHHH-HHTTC---------CCCH-H-H-HHHHHHHTTTTHHHHCC
T ss_pred HHHHHHHHHHHHHHHHH-hhccC---------CCCH-H-H-HHHHHHHcCcHHhhcCC
Confidence 78999999988665543 22221 1222 1 2 33678999998766433
Done!