Query 010061
Match_columns 519
No_of_seqs 225 out of 1405
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 19:02:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2frx_A Hypothetical protein YE 99.9 2.4E-22 8.1E-27 215.7 18.2 218 3-432 227-446 (479)
2 3m4x_A NOL1/NOP2/SUN family pr 99.8 3.7E-20 1.3E-24 197.8 15.9 205 3-407 215-419 (456)
3 3m6w_A RRNA methylase; rRNA me 99.8 2.8E-19 9.7E-24 191.4 12.5 204 2-407 209-418 (464)
4 4fzv_A Putative methyltransfer 99.8 5.6E-20 1.9E-24 191.0 3.9 42 2-43 264-305 (359)
5 2b9e_A NOL1/NOP2/SUN domain fa 99.7 5E-18 1.7E-22 172.6 9.1 48 3-51 216-263 (309)
6 1ixk_A Methyltransferase; open 99.7 2E-17 6.9E-22 167.6 8.9 90 2-168 226-315 (315)
7 3ajd_A Putative methyltransfer 99.6 3.3E-15 1.1E-19 147.8 9.7 49 2-51 191-239 (274)
8 2yxl_A PH0851 protein, 450AA l 99.5 1.9E-14 6.4E-19 152.6 7.3 48 2-50 369-416 (450)
9 1sqg_A SUN protein, FMU protei 99.4 3.7E-13 1.3E-17 141.6 8.7 45 3-48 355-399 (429)
10 3id6_C Fibrillarin-like rRNA/T 95.9 0.004 1.4E-07 60.6 3.4 49 3-53 161-216 (232)
11 4dmg_A Putative uncharacterize 95.4 0.0087 3E-07 62.5 4.1 49 2-50 306-356 (393)
12 1wxx_A TT1595, hypothetical pr 94.4 0.037 1.3E-06 56.8 5.4 48 3-50 306-355 (382)
13 2as0_A Hypothetical protein PH 93.1 0.076 2.6E-06 54.6 4.9 47 3-49 316-364 (396)
14 3c0k_A UPF0064 protein YCCW; P 91.9 0.1 3.6E-06 53.6 4.1 48 3-50 320-369 (396)
15 2dul_A N(2),N(2)-dimethylguano 87.4 0.2 6.8E-06 51.9 1.9 40 2-42 144-183 (378)
16 1sqw_A Saccharomyces cerevisia 85.1 0.55 1.9E-05 44.6 3.5 121 290-433 11-136 (188)
17 3v97_A Ribosomal RNA large sub 84.7 0.69 2.4E-05 51.7 4.7 42 3-50 638-679 (703)
18 3njr_A Precorrin-6Y methylase; 83.9 0.79 2.7E-05 42.5 4.0 37 4-43 136-172 (204)
19 2p38_A Protein involved in rib 83.5 6.9 0.00024 36.1 10.2 135 290-462 17-157 (166)
20 2frn_A Hypothetical protein PH 82.7 0.7 2.4E-05 45.1 3.2 46 3-48 206-254 (278)
21 2bm8_A Cephalosporin hydroxyla 82.7 0.82 2.8E-05 43.5 3.7 48 3-50 167-216 (236)
22 3hm2_A Precorrin-6Y C5,15-meth 82.3 0.99 3.4E-05 39.5 3.8 45 3-50 108-152 (178)
23 1inl_A Spermidine synthase; be 82.1 0.74 2.5E-05 45.6 3.2 46 2-48 185-232 (296)
24 3e05_A Precorrin-6Y C5,15-meth 81.1 1.5 5.1E-05 39.8 4.7 45 3-50 123-167 (204)
25 2b78_A Hypothetical protein SM 78.0 1.7 5.9E-05 44.6 4.4 41 3-43 312-354 (385)
26 2qm3_A Predicted methyltransfe 77.1 3.4 0.00012 42.0 6.3 40 2-42 257-300 (373)
27 3lcc_A Putative methyl chlorid 75.0 3.2 0.00011 38.4 5.0 47 3-51 152-205 (235)
28 1i1n_A Protein-L-isoaspartate 74.4 0.62 2.1E-05 43.1 -0.1 30 4-33 164-193 (226)
29 1l3i_A Precorrin-6Y methyltran 74.0 2.3 7.8E-05 37.3 3.6 46 2-50 114-159 (192)
30 3mti_A RRNA methylase; SAM-dep 73.5 2.6 8.7E-05 37.5 3.8 35 3-37 116-153 (185)
31 3jwh_A HEN1; methyltransferase 68.1 5.8 0.0002 36.1 5.0 52 2-53 121-194 (217)
32 3u81_A Catechol O-methyltransf 67.7 2.8 9.7E-05 38.7 2.8 43 3-50 152-194 (221)
33 3evz_A Methyltransferase; NYSG 65.6 4.3 0.00015 37.3 3.6 46 2-49 159-204 (230)
34 2igt_A SAM dependent methyltra 65.3 5 0.00017 40.4 4.3 45 2-46 252-299 (332)
35 3h2b_A SAM-dependent methyltra 64.9 6.1 0.00021 35.4 4.4 48 2-51 121-180 (203)
36 3dh0_A SAM dependent methyltra 63.5 5.8 0.0002 35.9 4.1 47 2-50 123-178 (219)
37 3axs_A Probable N(2),N(2)-dime 62.8 1.7 5.8E-05 45.3 0.3 40 3-43 139-178 (392)
38 3e8s_A Putative SAM dependent 62.8 9.3 0.00032 34.3 5.3 23 2-24 132-154 (227)
39 3vc1_A Geranyl diphosphate 2-C 62.7 4.7 0.00016 39.4 3.5 26 2-27 201-226 (312)
40 2b3t_A Protein methyltransfera 62.6 2.7 9.3E-05 40.4 1.7 37 2-42 218-254 (276)
41 2yx1_A Hypothetical protein MJ 62.2 4 0.00014 40.9 2.9 32 3-37 272-303 (336)
42 3jwg_A HEN1, methyltransferase 61.6 8.3 0.00028 35.0 4.8 54 2-55 121-196 (219)
43 1yb2_A Hypothetical protein TA 61.3 2.4 8.4E-05 40.8 1.1 43 3-50 192-234 (275)
44 3f4k_A Putative methyltransfer 60.0 6 0.0002 36.8 3.6 25 3-27 131-155 (257)
45 3sm3_A SAM-dependent methyltra 59.2 8.4 0.00029 34.9 4.3 24 3-26 122-145 (235)
46 3tfw_A Putative O-methyltransf 59.2 8 0.00027 36.6 4.3 24 3-26 151-174 (248)
47 3g5l_A Putative S-adenosylmeth 58.9 6.5 0.00022 36.6 3.6 23 2-24 125-147 (253)
48 3kkz_A Uncharacterized protein 58.6 6.1 0.00021 37.3 3.4 26 3-28 131-156 (267)
49 2a14_A Indolethylamine N-methy 57.2 7.9 0.00027 36.8 3.9 22 2-23 177-198 (263)
50 2zfu_A Nucleomethylin, cerebra 56.6 9.2 0.00031 34.6 4.1 46 2-50 131-176 (215)
51 3c3y_A Pfomt, O-methyltransfer 56.3 7 0.00024 36.8 3.3 25 2-26 161-185 (237)
52 3eey_A Putative rRNA methylase 55.4 7 0.00024 34.9 3.1 26 2-27 119-144 (197)
53 2kw5_A SLR1183 protein; struct 54.3 13 0.00046 33.1 4.8 26 2-27 111-136 (202)
54 3dtn_A Putative methyltransfer 53.2 11 0.00036 34.6 4.0 25 3-27 129-153 (234)
55 3kr9_A SAM-dependent methyltra 53.0 17 0.00058 34.9 5.4 42 1-49 98-139 (225)
56 2pwy_A TRNA (adenine-N(1)-)-me 52.5 13 0.00044 34.5 4.5 23 3-25 179-201 (258)
57 3g2m_A PCZA361.24; SAM-depende 51.7 9.3 0.00032 36.8 3.4 27 2-28 170-196 (299)
58 2nyu_A Putative ribosomal RNA 51.6 7.9 0.00027 34.3 2.7 23 3-25 126-148 (196)
59 1ri5_A MRNA capping enzyme; me 51.2 9.1 0.00031 36.2 3.2 24 2-25 154-177 (298)
60 3cgg_A SAM-dependent methyltra 49.6 19 0.00067 31.2 5.0 47 2-51 127-173 (195)
61 2gpy_A O-methyltransferase; st 49.3 6.6 0.00023 36.3 1.9 25 2-26 140-164 (233)
62 3dou_A Ribosomal RNA large sub 49.1 4.4 0.00015 37.2 0.6 35 3-40 120-154 (191)
63 3grz_A L11 mtase, ribosomal pr 49.0 6.2 0.00021 35.6 1.6 43 3-50 140-182 (205)
64 3hnr_A Probable methyltransfer 48.9 17 0.00057 32.8 4.5 27 3-29 126-152 (220)
65 2i62_A Nicotinamide N-methyltr 48.4 13 0.00043 34.6 3.7 21 3-23 179-199 (265)
66 3e23_A Uncharacterized protein 47.7 18 0.00062 32.5 4.5 41 2-42 121-172 (211)
67 1kpg_A CFA synthase;, cyclopro 47.5 14 0.00048 35.1 3.9 24 3-26 149-172 (287)
68 3lpm_A Putative methyltransfer 45.9 13 0.00046 35.1 3.5 36 3-42 157-192 (259)
69 3l8d_A Methyltransferase; stru 45.9 16 0.00056 33.3 4.0 24 3-26 134-157 (242)
70 3ujc_A Phosphoethanolamine N-m 45.8 12 0.00041 34.6 3.1 25 2-26 139-163 (266)
71 1xtp_A LMAJ004091AAA; SGPP, st 45.6 18 0.00063 33.2 4.3 41 2-42 177-229 (254)
72 4dzr_A Protein-(glutamine-N5) 44.8 7.9 0.00027 34.5 1.6 35 2-39 144-178 (215)
73 2hlg_A Fruit-specific protein; 44.7 5.9 0.0002 27.9 0.5 12 15-27 28-39 (39)
74 1xdz_A Methyltransferase GIDB; 44.5 11 0.00038 35.2 2.6 39 3-42 155-193 (240)
75 3hem_A Cyclopropane-fatty-acyl 44.3 21 0.00072 34.3 4.7 26 2-27 163-188 (302)
76 3dli_A Methyltransferase; PSI- 44.3 37 0.0012 31.2 6.2 47 2-50 120-181 (240)
77 2plw_A Ribosomal RNA methyltra 43.9 14 0.00049 32.8 3.2 35 3-40 135-169 (201)
78 3duw_A OMT, O-methyltransferas 42.4 21 0.00072 32.4 4.1 24 3-26 148-171 (223)
79 3q87_B N6 adenine specific DNA 42.3 18 0.0006 32.0 3.5 42 3-50 105-146 (170)
80 1nt2_A Fibrillarin-like PRE-rR 41.7 7.9 0.00027 35.9 1.1 19 4-22 143-161 (210)
81 3mq2_A 16S rRNA methyltransfer 41.6 23 0.00078 32.1 4.2 20 3-22 121-140 (218)
82 2pxx_A Uncharacterized protein 41.2 9.6 0.00033 34.0 1.6 24 2-25 139-162 (215)
83 2vdv_E TRNA (guanine-N(7)-)-me 40.5 19 0.00064 33.8 3.6 21 3-23 154-174 (246)
84 2yxd_A Probable cobalt-precorr 40.4 24 0.00082 30.3 4.0 43 3-50 114-156 (183)
85 3g89_A Ribosomal RNA small sub 40.4 14 0.00046 35.4 2.6 39 3-42 165-203 (249)
86 1vlm_A SAM-dependent methyltra 40.3 23 0.0008 32.2 4.1 24 3-26 120-143 (219)
87 2p7i_A Hypothetical protein; p 40.2 24 0.00081 32.0 4.1 23 3-25 121-144 (250)
88 1y8c_A S-adenosylmethionine-de 39.8 20 0.00067 32.6 3.5 23 2-24 122-144 (246)
89 1o54_A SAM-dependent O-methylt 39.2 15 0.0005 35.1 2.6 43 3-50 194-236 (277)
90 3ofk_A Nodulation protein S; N 39.2 17 0.00057 32.8 2.8 38 3-40 135-178 (216)
91 3dr5_A Putative O-methyltransf 39.1 15 0.00051 34.3 2.6 23 3-25 144-166 (221)
92 3cbg_A O-methyltransferase; cy 38.7 16 0.00056 34.0 2.8 24 3-26 163-186 (232)
93 3dlc_A Putative S-adenosyl-L-m 38.3 21 0.00072 31.7 3.4 32 2-33 128-159 (219)
94 2f8l_A Hypothetical protein LM 38.0 18 0.00063 35.9 3.2 38 3-40 237-275 (344)
95 2ex4_A Adrenal gland protein A 38.0 30 0.001 31.8 4.5 46 3-50 166-222 (241)
96 2p8j_A S-adenosylmethionine-de 37.8 9.5 0.00033 34.1 1.0 25 2-26 108-132 (209)
97 3bxo_A N,N-dimethyltransferase 37.5 12 0.00043 34.0 1.7 25 2-26 121-145 (239)
98 3dp7_A SAM-dependent methyltra 37.1 55 0.0019 32.6 6.6 26 2-27 267-292 (363)
99 3c3p_A Methyltransferase; NP_9 36.7 14 0.00049 33.4 2.0 24 3-26 141-164 (210)
100 4htf_A S-adenosylmethionine-de 36.6 28 0.00096 33.0 4.1 23 3-25 154-176 (285)
101 3lst_A CALO1 methyltransferase 36.5 54 0.0018 32.4 6.4 25 2-26 266-290 (348)
102 3lec_A NADB-rossmann superfami 36.1 41 0.0014 32.3 5.2 42 1-49 104-145 (230)
103 2ift_A Putative methylase HI07 36.1 12 0.00042 34.1 1.4 23 4-26 143-167 (201)
104 2g72_A Phenylethanolamine N-me 35.9 33 0.0011 32.7 4.6 20 3-22 196-215 (289)
105 3bt7_A TRNA (uracil-5-)-methyl 35.8 11 0.00037 38.2 1.1 20 6-25 310-329 (369)
106 2fca_A TRNA (guanine-N(7)-)-me 35.4 18 0.00063 33.2 2.5 21 3-23 134-154 (213)
107 3bus_A REBM, methyltransferase 35.3 26 0.00088 32.8 3.6 23 3-25 147-169 (273)
108 3ou2_A SAM-dependent methyltra 35.2 11 0.00037 33.8 0.9 24 2-25 126-149 (218)
109 2o57_A Putative sarcosine dime 35.2 26 0.00088 33.4 3.6 24 2-25 167-190 (297)
110 2vdw_A Vaccinia virus capping 35.1 12 0.00041 36.9 1.3 22 3-24 150-171 (302)
111 3orh_A Guanidinoacetate N-meth 34.9 9.2 0.00031 36.0 0.4 20 3-22 151-170 (236)
112 3i53_A O-methyltransferase; CO 34.4 57 0.0019 31.8 6.1 26 2-27 254-279 (332)
113 1nkv_A Hypothetical protein YJ 33.2 17 0.00058 33.6 1.9 24 2-25 120-143 (256)
114 2b25_A Hypothetical protein; s 32.3 53 0.0018 32.2 5.5 19 4-22 201-219 (336)
115 1xxl_A YCGJ protein; structura 32.2 38 0.0013 31.2 4.2 23 3-25 105-127 (239)
116 3thr_A Glycine N-methyltransfe 32.2 15 0.00052 34.9 1.4 24 2-25 155-178 (293)
117 2hnk_A SAM-dependent O-methylt 31.6 22 0.00076 32.9 2.4 24 3-26 162-185 (239)
118 1yzh_A TRNA (guanine-N(7)-)-me 31.6 26 0.00088 31.8 2.8 44 3-51 137-180 (214)
119 2ih2_A Modification methylase 31.4 30 0.001 34.7 3.6 46 3-50 145-192 (421)
120 1ej0_A FTSJ; methyltransferase 31.3 18 0.00062 30.6 1.6 36 2-40 116-151 (180)
121 3ckk_A TRNA (guanine-N(7)-)-me 31.1 16 0.00056 34.5 1.4 22 3-24 149-170 (235)
122 1mjf_A Spermidine synthase; sp 30.7 23 0.00077 34.4 2.4 24 2-25 173-196 (281)
123 3k6r_A Putative transferase PH 30.5 37 0.0013 33.5 3.9 48 3-50 206-256 (278)
124 1pjz_A Thiopurine S-methyltran 30.4 22 0.00075 32.3 2.2 24 3-26 121-144 (203)
125 3d2l_A SAM-dependent methyltra 29.8 18 0.00061 33.0 1.4 24 2-25 117-140 (243)
126 3gwz_A MMCR; methyltransferase 29.4 71 0.0024 31.9 5.9 26 2-27 287-312 (369)
127 3cc8_A Putative methyltransfer 29.2 45 0.0015 29.7 4.0 22 3-24 111-132 (230)
128 3a27_A TYW2, uncharacterized p 28.7 21 0.00072 34.4 1.8 23 3-25 200-222 (272)
129 3i9f_A Putative type 11 methyl 28.6 21 0.00071 30.8 1.6 23 3-25 93-115 (170)
130 1zx0_A Guanidinoacetate N-meth 28.4 10 0.00034 35.2 -0.6 22 3-24 151-172 (236)
131 3r3h_A O-methyltransferase, SA 28.0 24 0.00081 33.4 2.0 23 3-25 151-173 (242)
132 1wg8_A Predicted S-adenosylmet 27.8 35 0.0012 34.2 3.2 35 3-40 214-248 (285)
133 1qzz_A RDMB, aclacinomycin-10- 27.8 49 0.0017 32.7 4.4 22 2-23 267-288 (374)
134 3ccf_A Cyclopropane-fatty-acyl 27.0 48 0.0017 31.2 4.0 23 3-25 135-157 (279)
135 3dxy_A TRNA (guanine-N(7)-)-me 26.4 21 0.00072 33.2 1.3 22 3-24 131-152 (218)
136 3bkw_A MLL3908 protein, S-aden 26.4 21 0.00073 32.5 1.3 22 2-23 124-145 (243)
137 2p35_A Trans-aconitate 2-methy 26.3 36 0.0012 31.3 2.9 22 3-24 113-134 (259)
138 1ve3_A Hypothetical protein PH 26.2 21 0.00074 32.1 1.3 23 3-25 123-145 (227)
139 1sui_A Caffeoyl-COA O-methyltr 26.2 34 0.0012 32.4 2.7 22 3-24 171-192 (247)
140 2p41_A Type II methyltransfera 25.6 52 0.0018 32.5 4.0 38 3-42 172-211 (305)
141 2gs9_A Hypothetical protein TT 25.5 23 0.00078 31.7 1.3 24 3-26 113-136 (211)
142 3tr6_A O-methyltransferase; ce 25.4 24 0.00082 32.0 1.4 24 3-26 155-178 (225)
143 2fk8_A Methoxy mycolic acid sy 25.1 33 0.0011 33.1 2.5 26 2-27 174-199 (318)
144 3ocj_A Putative exported prote 25.1 29 0.00099 33.5 2.0 24 3-26 208-231 (305)
145 2ip2_A Probable phenazine-spec 25.1 1.1E+02 0.0037 29.7 6.2 25 2-26 252-276 (334)
146 2ld4_A Anamorsin; methyltransf 25.1 24 0.00081 30.9 1.3 20 2-21 81-100 (176)
147 1tw3_A COMT, carminomycin 4-O- 24.7 75 0.0025 31.2 5.0 23 2-24 268-290 (360)
148 3tka_A Ribosomal RNA small sub 24.5 42 0.0014 34.5 3.2 74 3-86 255-333 (347)
149 1wy7_A Hypothetical protein PH 24.3 53 0.0018 29.2 3.5 39 2-45 131-169 (207)
150 2pt6_A Spermidine synthase; tr 24.1 36 0.0012 33.9 2.6 35 2-36 210-246 (321)
151 1iy9_A Spermidine synthase; ro 24.1 37 0.0013 32.8 2.6 22 3-24 170-191 (275)
152 2esr_A Methyltransferase; stru 23.9 27 0.00091 30.4 1.4 18 10-27 126-143 (177)
153 4hg2_A Methyltransferase type 23.8 31 0.0011 33.2 2.0 26 3-28 116-141 (257)
154 2pjd_A Ribosomal RNA small sub 23.7 28 0.00095 34.6 1.7 26 3-28 284-309 (343)
155 2y1w_A Histone-arginine methyl 23.3 17 0.00058 36.4 -0.0 37 2-38 135-173 (348)
156 1jsx_A Glucose-inhibited divis 22.8 31 0.0011 30.7 1.6 24 3-26 146-169 (207)
157 2qfm_A Spermine synthase; sper 22.6 45 0.0015 34.5 2.9 44 4-47 296-339 (364)
158 2gb4_A Thiopurine S-methyltran 22.3 27 0.00093 33.4 1.2 23 3-25 172-194 (252)
159 2qe6_A Uncharacterized protein 22.3 42 0.0014 32.4 2.6 24 2-25 176-199 (274)
160 2r3s_A Uncharacterized protein 22.2 63 0.0021 31.2 3.8 25 2-26 251-275 (335)
161 2avd_A Catechol-O-methyltransf 22.1 32 0.0011 31.3 1.6 23 3-25 160-182 (229)
162 2i7c_A Spermidine synthase; tr 21.9 43 0.0015 32.4 2.6 23 3-25 173-195 (283)
163 4gek_A TRNA (CMO5U34)-methyltr 21.7 31 0.0011 33.2 1.5 21 3-23 159-179 (261)
164 1i9g_A Hypothetical protein RV 21.6 24 0.00083 33.2 0.7 24 3-26 184-207 (280)
165 3dmg_A Probable ribosomal RNA 21.6 33 0.0011 35.1 1.7 26 3-28 321-346 (381)
166 3ggd_A SAM-dependent methyltra 21.3 49 0.0017 30.3 2.7 25 2-26 143-167 (245)
167 3gnl_A Uncharacterized protein 21.3 1E+02 0.0034 29.9 5.0 42 1-49 104-145 (244)
168 3g07_A 7SK snRNA methylphospha 20.8 30 0.001 33.4 1.2 23 2-24 200-222 (292)
169 2xvm_A Tellurite resistance pr 20.5 35 0.0012 29.9 1.4 20 2-21 116-135 (199)
170 2yvl_A TRMI protein, hypotheti 20.3 33 0.0011 31.4 1.3 23 3-25 171-193 (248)
171 3p2e_A 16S rRNA methylase; met 20.1 36 0.0012 31.8 1.5 20 3-22 120-139 (225)
172 3reo_A (ISO)eugenol O-methyltr 20.0 64 0.0022 32.3 3.5 26 2-27 280-305 (368)
No 1
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.88 E-value=2.4e-22 Score=215.70 Aligned_cols=218 Identities=19% Similarity=0.300 Sum_probs=158.9
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeCCCCCCcccCCCCcccceecCCCccccchhhhh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVR 82 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~~~~lp~l~~~pGl~~W~v~~~~~~~~~~~~v~ 82 (519)
+||..|+.+|||||+|||||||++|+|||+||+++|+++++.++++++...+|+ ...
T Consensus 227 ~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~~~~~~~~------~~~----------------- 283 (479)
T 2frx_A 227 ELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPG------ANK----------------- 283 (479)
T ss_dssp HHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECCCTTSSTT------GGG-----------------
T ss_pred HHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCCCceecccccccccc------ccc-----------------
Confidence 689999999999999999999999999999999999999876677665432221 100
Q ss_pred hhhhccccCCCCCCCCCCCCCCCCCCCCCCccccCCccccchhhcccccccchhhhhccccccceeeecccccCCCceEE
Q 010061 83 KFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFI 162 (519)
Q Consensus 83 ~~~~~~i~~SMFpp~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~e~~~~~lercmRi~PH~qdTGGFFI 162 (519)
.+..+.|+|+|||.++|+||||
T Consensus 284 ----------------------------------------------------------~~~~~g~~r~~P~~~~~dGfF~ 305 (479)
T 2frx_A 284 ----------------------------------------------------------ALTEEGFLHVFPQIYDCEGFFV 305 (479)
T ss_dssp ----------------------------------------------------------GBCTTSCEEECTTTTTSCCEEE
T ss_pred ----------------------------------------------------------ccccCCeEEECCCCCCcCccEE
Confidence 0113578999999999999999
Q ss_pred EEEEecCCCCccccccCCcccccCCCCCCCCccccCCcccccccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCC
Q 010061 163 AVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQDTEEVNGMEVDLADGTDEKDPEGSLEANSIDNEDGAAVEPDPL 242 (519)
Q Consensus 163 Avl~K~~~~~~~~~~~~~k~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (519)
|+|+|.++.+..+.
T Consensus 306 A~l~k~~~~~~~~~------------------------------------------------------------------ 319 (479)
T 2frx_A 306 ARLRKTQAIPALPA------------------------------------------------------------------ 319 (479)
T ss_dssp EEEEECSCCCCCCC------------------------------------------------------------------
T ss_pred EEEEEcCCCCCccc------------------------------------------------------------------
Confidence 99999764322000
Q ss_pred ccccCCCcccccCCCcccccccCCCccccccCCCccccCCcccCC--ChHHHHHHHHHhCCCCCCCCCCceEeecCCCCc
Q 010061 243 TCEKVDSEETEVPVNTETKSERTGGKRKLQIQGKWKGIDPVIFFN--DETIINSIKTFYGIDDSFQLSGQLVSRNGDTNR 320 (519)
Q Consensus 243 ~~~~~~~e~~~~~~~~~~~~~~~~~Krk~~~~~~fk~~dPf~f~~--d~~~~~~I~~fYgI~~~FP~~~~Lv~Rn~~g~~ 320 (519)
+ ..++ ++ .||..+. ..+.++.+.++|+++.. .+..|+.|+
T Consensus 320 ---------------------~-~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----- 361 (479)
T 2frx_A 320 ---------------------P-KYKV-----GN----FPFSPVKDREAGQIRQAATGVGLNWD--ENLRLWQRD----- 361 (479)
T ss_dssp ---------------------C-CCCC-----CC----CSCEECCHHHHHHHHHHHHTTTBCCC--TTEEEEESS-----
T ss_pred ---------------------c-cccc-----cc----CCccccchhhHHHHHHHHHHcCCCCC--CCceEEEEC-----
Confidence 0 0000 00 1333332 23456778888998633 334677774
Q ss_pred ceEEEEeCHHHHHHHHhcccCCCceEEEEceEeeEEEecCCCCCCCcceeeeccchhhhhhccccCceEEeCHHHHHHHh
Q 010061 321 VKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGNSAPCSFRISSEGLPVILPYITKQILYASLVDFKHLL 400 (519)
Q Consensus 321 ~k~IYyvS~~vk~Il~~N~~~g~~LK~i~~GvK~F~rq~~~~~~~~~C~~RI~qEGl~~l~p~~~kRiv~~s~edl~~LL 400 (519)
+.||++.....+++ .+|||++.|+++++..+ -+||.++.....+.+.-.++++.++.+++..+|
T Consensus 362 -~~~~~~p~~~~~~~-------~~lr~~r~G~~lg~~kk--------~rf~Ps~~la~~l~~~~~~~~~~l~~~~~~~yL 425 (479)
T 2frx_A 362 -KELWLFPVGIEALI-------GKVRFSRLGIKLAETHN--------KGYRWQHEAVIALASPDNMNAFELTPQEAEEWY 425 (479)
T ss_dssp -SEEEEEEHHHHTTB-------TTBCCSEESEEEEEEET--------TEEEECHHHHHHHBCSSSSSEEECCHHHHHHHH
T ss_pred -CEEEEeccccchhc-------cCcEEEecceEEEEEec--------CCceEcHHHHHhcchhhcCcEEECCHHHHHHHh
Confidence 46999999776554 57999999999999764 489999999999988878889999999999999
Q ss_pred hcCCCCcccCCChHHHHHHhcCCCceEEEEEe
Q 010061 401 QYKTIKFADFVDAEFGEKASKLMMGCCVIVLS 432 (519)
Q Consensus 401 ~~~~~~~~~~~d~e~~e~~~~l~~Gc~Vl~~~ 432 (519)
....+....- ..-|-++|.++
T Consensus 426 ~Ge~i~~~~~-----------~~~G~vlv~~~ 446 (479)
T 2frx_A 426 RGRDVYPQAA-----------PVADDVLVTFQ 446 (479)
T ss_dssp TTCCCCCSSC-----------CSCSEEEEEET
T ss_pred cCCCCcCCCC-----------CCCCEEEEEEC
Confidence 9887765321 12476766665
No 2
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.83 E-value=3.7e-20 Score=197.78 Aligned_cols=205 Identities=19% Similarity=0.315 Sum_probs=143.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeCCCCCCcccCCCCcccceecCCCccccchhhhh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHVR 82 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~~~~lp~l~~~pGl~~W~v~~~~~~~~~~~~v~ 82 (519)
+||..|+.+|||||+|||||||++|+|||+||+++|++++ ++++++.. .++ ..+|+..|...
T Consensus 215 ~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~--~~l~~~~~-~~~--~~~~~~~~~~~------------- 276 (456)
T 3m4x_A 215 EILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP--VTIEEIPL-TQS--VSSGRSEWGSV------------- 276 (456)
T ss_dssp HHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS--EEEECCCC-SSC--CEECCGGGSSS-------------
T ss_pred HHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC--CEEEeccc-ccc--ccccccccccc-------------
Confidence 7899999999999999999999999999999999999996 99998863 222 12344444210
Q ss_pred hhhhccccCCCCCCCCCCCCCCCCCCCCCCccccCCccccchhhcccccccchhhhhccccccceeeecccccCCCceEE
Q 010061 83 KFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFI 162 (519)
Q Consensus 83 ~~~~~~i~~SMFpp~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~e~~~~~lercmRi~PH~qdTGGFFI 162 (519)
+ .+++|+|+|||.++|.||||
T Consensus 277 ------------~-----------------------------------------------~~~~~~r~~P~~~~~dGFF~ 297 (456)
T 3m4x_A 277 ------------A-----------------------------------------------GLEKTIRIWPHKDQGEGHFV 297 (456)
T ss_dssp ------------T-----------------------------------------------TGGGSEEECTTTSSSSCEEE
T ss_pred ------------c-----------------------------------------------ccCCeEEECCCCCCCcCeEE
Confidence 0 24689999999999999999
Q ss_pred EEEEecCCCCccccccCCcccccCCCCCCCCccccCCcccccccccccccCCCCCCCCCcccccccCCCCCCCCCCCCCC
Q 010061 163 AVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQDTEEVNGMEVDLADGTDEKDPEGSLEANSIDNEDGAAVEPDPL 242 (519)
Q Consensus 163 Avl~K~~~~~~~~~~~~~k~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (519)
|+|+|.+..+.. +..
T Consensus 298 A~l~k~~~~~~~------~~~----------------------------------------------------------- 312 (456)
T 3m4x_A 298 AKLTFHGQNQMH------KEK----------------------------------------------------------- 312 (456)
T ss_dssp EEEEECSCCCCC------C-------------------------------------------------------------
T ss_pred EEEEECCCCccc------ccc-----------------------------------------------------------
Confidence 999998642100 000
Q ss_pred ccccCCCcccccCCCcccccccCCCccccccCCCccccCCcccCCChHHHHHHHHHhCCCCCCCCCCceEeecCCCCcce
Q 010061 243 TCEKVDSEETEVPVNTETKSERTGGKRKLQIQGKWKGIDPVIFFNDETIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVK 322 (519)
Q Consensus 243 ~~~~~~~e~~~~~~~~~~~~~~~~~Krk~~~~~~fk~~dPf~f~~d~~~~~~I~~fYgI~~~FP~~~~Lv~Rn~~g~~~k 322 (519)
.+....+.+ ..+ ...+.++.+..-|++. + ...++.|+ .
T Consensus 313 -------------------~~~~~~~~~---------~~~----~~~~~~~~~~~~~~~~---~-~~~~~~~~------~ 350 (456)
T 3m4x_A 313 -------------------KTRKKSKVQ---------MTK----EQEKLWTEFSNDFHYE---A-TGRLLVFN------D 350 (456)
T ss_dssp --------------------------CS---------CCH----HHHHHHHHHHHHTTCC---C-CSEEEEET------T
T ss_pred -------------------ccccccccc---------CcH----HHHHHHHHHHHHhccC---C-CCceEEEC------C
Confidence 000000000 000 0123455555556653 2 24666664 4
Q ss_pred EEEEeCHHHHHHHHhcccCCCceEEEEceEeeEEEecCCCCCCCcceeeeccchhhhhhccccCceEEeCHHHHHHHhhc
Q 010061 323 RIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGNSAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQY 402 (519)
Q Consensus 323 ~IYyvS~~vk~Il~~N~~~g~~LK~i~~GvK~F~rq~~~~~~~~~C~~RI~qEGl~~l~p~~~kRiv~~s~edl~~LL~~ 402 (519)
.||++.....++ .+|||++.|+++-+-.+ -+|+.++.....+.+--.++.+.++.++...+|..
T Consensus 351 ~~~~~p~~~~~~--------~~l~~~r~G~~lg~~kk--------~~f~p~~~la~~l~~~~~~~~~~l~~~~~~~yl~g 414 (456)
T 3m4x_A 351 HLWEVPELAPSL--------DGLKVVRTGLHLGDFKK--------NRFEPSYALALATKKIENIPCLPITQKEWQSYTAG 414 (456)
T ss_dssp EEEEECTTCCCC--------TTCCEEEESEEEEEEET--------TEEEECHHHHHTCCCGGGSCEEEECHHHHHHHHHT
T ss_pred EEEEeccCcccc--------cCCeEEEcCceeeEEeC--------CceeECHHHHHhcCccccCcEEEcCHHHHHHHhCC
Confidence 699998754221 58999999999988763 48999999888887766677899999999999998
Q ss_pred CCCCc
Q 010061 403 KTIKF 407 (519)
Q Consensus 403 ~~~~~ 407 (519)
..+..
T Consensus 415 e~i~~ 419 (456)
T 3m4x_A 415 ETFQR 419 (456)
T ss_dssp CCEEC
T ss_pred CCccc
Confidence 77654
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.79 E-value=2.8e-19 Score=191.35 Aligned_cols=204 Identities=21% Similarity=0.260 Sum_probs=138.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeCCCCCCcccCCCCcccceecCCCccccchhhh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHV 81 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~~~~lp~l~~~pGl~~W~v~~~~~~~~~~~~v 81 (519)
.+||..|+.+|||||+|||||||++|+|||+||+++|+++++ ++++++.... + ..+|...|...
T Consensus 209 ~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~~-~~l~~~~~~~-~--~~~~~~~~~~~------------ 272 (464)
T 3m6w_A 209 KALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPE-FRLEDARLHP-L--FAPGVPEWGEG------------ 272 (464)
T ss_dssp HHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTT-EEEECCCCST-T--SEECCGGGTTT------------
T ss_pred HHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCCC-cEEEeccccc-c--cccCccccccc------------
Confidence 468999999999999999999999999999999999999975 8999875321 1 23444444200
Q ss_pred hhhhhccccCCCCCCCCCCCCCCCCCCCCCCccccCCccccchhhcccccccchhhhhccccccceeeecccccCCCceE
Q 010061 82 RKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFF 161 (519)
Q Consensus 82 ~~~~~~~i~~SMFpp~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~e~~~~~lercmRi~PH~qdTGGFF 161 (519)
...+++|+|+|||.++|.|||
T Consensus 273 -----------------------------------------------------------~~~~~~~~r~~P~~~~~dGfF 293 (464)
T 3m6w_A 273 -----------------------------------------------------------NPELLKTARLWPHRLEGEGHF 293 (464)
T ss_dssp -----------------------------------------------------------CGGGGGSEEECTTTSSSSCEE
T ss_pred -----------------------------------------------------------ccccCCeEEECCCCCCceeEE
Confidence 012568999999999999999
Q ss_pred EEEEEecCCCCccccccCCcccccCCCCCCCCccccCCcccccccccccccCCCCCCCCCcccccccCCCCCCCCCCCCC
Q 010061 162 IAVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQDTEEVNGMEVDLADGTDEKDPEGSLEANSIDNEDGAAVEPDP 241 (519)
Q Consensus 162 IAvl~K~~~~~~~~~~~~~k~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 241 (519)
||+|+|.+...... .
T Consensus 294 ~A~l~k~~~~~~~~-------~---------------------------------------------------------- 308 (464)
T 3m6w_A 294 LARFRKEGGAWSTP-------R---------------------------------------------------------- 308 (464)
T ss_dssp EEEEEECSCCCCCC-------C----------------------------------------------------------
T ss_pred EEEEEECCCCCCcc-------c----------------------------------------------------------
Confidence 99999986421000 0
Q ss_pred CccccCCCcccccCCCcccccccCCCccccccCCCccccCCcccCCChHHHHHHHHHhCCCCCCCCCCceEeecCCCCcc
Q 010061 242 LTCEKVDSEETEVPVNTETKSERTGGKRKLQIQGKWKGIDPVIFFNDETIINSIKTFYGIDDSFQLSGQLVSRNGDTNRV 321 (519)
Q Consensus 242 ~~~~~~~~e~~~~~~~~~~~~~~~~~Krk~~~~~~fk~~dPf~f~~d~~~~~~I~~fYgI~~~FP~~~~Lv~Rn~~g~~~ 321 (519)
.+.+| +. ..+..+.+.+|......++. ..++.|+
T Consensus 309 ----------------------~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~------ 342 (464)
T 3m6w_A 309 ----------------------LERPS-PL----------------SQEALRAFRGFLEEAGLTLE-GPVLDRA------ 342 (464)
T ss_dssp ----------------------BCCCC-CC----------------CHHHHHHHHHHHHHHTCCCC-SCEEEET------
T ss_pred ----------------------ccccc-cc----------------cHHHHHHHHHHHhhhcccCC-ccEEEEC------
Confidence 00000 00 01111122233211112332 4566664
Q ss_pred eEEEEeCHHHHHHHHhcccCCCceEEEEceEeeEEEecCCCCCCCcceeeeccchhhhhhcc----ccCceEEeCHHH--
Q 010061 322 KRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGNSAPCSFRISSEGLPVILPY----ITKQILYASLVD-- 395 (519)
Q Consensus 322 k~IYyvS~~vk~Il~~N~~~g~~LK~i~~GvK~F~rq~~~~~~~~~C~~RI~qEGl~~l~p~----~~kRiv~~s~ed-- 395 (519)
..||++.....++ .+|||+..|+.+-+-.+ -+|+.++.-...+.+- -.++.+.++.+|
T Consensus 343 ~~~~~~p~~~~~~--------~~l~~~r~G~~lg~~kk--------~~f~p~~~la~~l~~~~~~~~~~~~~~l~~~~~~ 406 (464)
T 3m6w_A 343 GHLYLLPEGLPTL--------LGLKAPAPGLYLGKVQK--------GRFLPARALALAFGATLPWPEGLPRLALTPEDPR 406 (464)
T ss_dssp TEEEECCTTCBCC--------TTSCCSBSSEEEEEEET--------TEEEEBHHHHHHBTTTBCCCTTSCEEEECTTSHH
T ss_pred CEEEEeccCcccc--------cCCeEEEccceeeEEeC--------CceeECHHHHHhcCcccccccccceEEecccHHH
Confidence 4699998754332 58999999999998764 4899999988888765 336688888766
Q ss_pred HHHHhhcCCCCc
Q 010061 396 FKHLLQYKTIKF 407 (519)
Q Consensus 396 l~~LL~~~~~~~ 407 (519)
+..+|....+..
T Consensus 407 ~~~yl~ge~i~~ 418 (464)
T 3m6w_A 407 ALAFATGEGVAW 418 (464)
T ss_dssp HHHHHTTCCEEC
T ss_pred HHHHHCCCCccC
Confidence 888998877654
No 4
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.77 E-value=5.6e-20 Score=191.03 Aligned_cols=42 Identities=38% Similarity=0.617 Sum_probs=39.5
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEG 43 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~ 43 (519)
.+||.+|+.+|||||+|||||||++|+|||+||+++|+++++
T Consensus 264 ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~ 305 (359)
T 4fzv_A 264 VQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN 305 (359)
T ss_dssp HHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCC
Confidence 379999999999999999999999999999999999998764
No 5
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.72 E-value=5e-18 Score=172.63 Aligned_cols=48 Identities=31% Similarity=0.449 Sum_probs=44.2
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVS 51 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~~ 51 (519)
+||.+|+.+|+ ||+|||||||++|+|||+||.++|++++++++++++.
T Consensus 216 ~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~~~~~~~~~~ 263 (309)
T 2b9e_A 216 RALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPAL 263 (309)
T ss_dssp HHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTSTTTEEECCCC
T ss_pred HHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhCCCcEEEeccc
Confidence 68999999997 9999999999999999999999999998779988764
No 6
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.70 E-value=2e-17 Score=167.57 Aligned_cols=90 Identities=33% Similarity=0.564 Sum_probs=73.7
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeCCCCCCcccCCCCcccceecCCCccccchhhh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGLRKWKVRDKGIWLASHKHV 81 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~~~~lp~l~~~pGl~~W~v~~~~~~~~~~~~v 81 (519)
.+||.+++.+|||||+|||||||++|.|||+||.++|++++ +++++++. ..+|+..|....
T Consensus 226 ~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~--~~~~~~~~------~~~~~~~~~~~~----------- 286 (315)
T 1ixk_A 226 MRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFD--VELLPLKY------GEPALTNPFGIE----------- 286 (315)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS--EEEECCCS------SEECCSSGGGCC-----------
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCC--CEEecCCc------cccCcccccccc-----------
Confidence 37899999999999999999999999999999999999875 88887751 236666663210
Q ss_pred hhhhhccccCCCCCCCCCCCCCCCCCCCCCCccccCCccccchhhcccccccchhhhhccccccceeeecccccCCCceE
Q 010061 82 RKFRRIGIVPSMFPSGSSHMDATDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFF 161 (519)
Q Consensus 82 ~~~~~~~i~~SMFpp~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~e~~~~~lercmRi~PH~qdTGGFF 161 (519)
|.+ .+++|+|+|||.++|+|||
T Consensus 287 ------------~~~----------------------------------------------~~~~~~r~~P~~~~~dGfF 308 (315)
T 1ixk_A 287 ------------LSE----------------------------------------------EIKNARRLYPDVHETSGFF 308 (315)
T ss_dssp ------------CCG----------------------------------------------GGGGSEEECTTTSSSCSEE
T ss_pred ------------ccc----------------------------------------------ccCCEEEECCCCCCcccEE
Confidence 110 2578999999999999999
Q ss_pred EEEEEec
Q 010061 162 IAVLQKV 168 (519)
Q Consensus 162 IAvl~K~ 168 (519)
||+|+|.
T Consensus 309 ~A~l~k~ 315 (315)
T 1ixk_A 309 IAKIRKL 315 (315)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999984
No 7
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.58 E-value=3.3e-15 Score=147.84 Aligned_cols=49 Identities=47% Similarity=0.695 Sum_probs=45.2
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVS 51 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~~ 51 (519)
.+||.+++.+|||||+|||||||++|+|||++|.++|++++ .+++++++
T Consensus 191 ~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~-~~~~~~~~ 239 (274)
T 3ajd_A 191 KELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRN-DVELIIIK 239 (274)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCS-SEEEECCC
T ss_pred HHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCC-CcEEecCc
Confidence 46899999999999999999999999999999999999887 49998875
No 8
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.49 E-value=1.9e-14 Score=152.60 Aligned_cols=48 Identities=31% Similarity=0.486 Sum_probs=43.5
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
.+||.+++.+|||||+|||||||++|+|||.+|.++|+++++ ++++++
T Consensus 369 ~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~-~~~~~~ 416 (450)
T 2yxl_A 369 RELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPE-FKLVPL 416 (450)
T ss_dssp HHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSS-CEECCC
T ss_pred HHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCC-CEEeec
Confidence 368999999999999999999999999999999999999875 777654
No 9
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.39 E-value=3.7e-13 Score=141.60 Aligned_cols=45 Identities=36% Similarity=0.559 Sum_probs=41.2
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEe
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELV 48 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lv 48 (519)
+||.+++.+|||||+|||||||++|.|||.+|.++|+++++ ++++
T Consensus 355 ~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~-~~~~ 399 (429)
T 1sqg_A 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AELC 399 (429)
T ss_dssp HHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTT-CEEC
T ss_pred HHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCC-CEEe
Confidence 78999999999999999999999999999999999998864 5554
No 10
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=95.88 E-value=0.004 Score=60.62 Aligned_cols=49 Identities=20% Similarity=0.261 Sum_probs=36.9
Q ss_pred HHHHHHHh-cccCCCEEEEE---cC---CCChhcCHHHHHHHHHhCCCcEEEeeCCCC
Q 010061 3 VFVTAGIS-LLKVGGRIVYS---TC---SMNPVENEAVVAEILRKCEGSVELVDVSNE 53 (519)
Q Consensus 3 ~IL~ra~~-lLk~GG~lVYS---TC---Slnp~ENEaVV~~~L~~~~~~v~lvd~~~~ 53 (519)
+||...+. +|||||+||+| || +++|.||.+.+.+.|+.++ |++++.-..
T Consensus 161 ~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~g--f~~~~~~~l 216 (232)
T 3id6_C 161 DIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSN--FETIQIINL 216 (232)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTT--EEEEEEEEC
T ss_pred HHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCC--CEEEEEecc
Confidence 45655555 99999999977 99 9999999999999999875 888776543
No 11
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.44 E-value=0.0087 Score=62.48 Aligned_cols=49 Identities=20% Similarity=0.240 Sum_probs=41.4
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCH--HHHHHHHHhCCCcEEEeeC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENE--AVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENE--aVV~~~L~~~~~~v~lvd~ 50 (519)
.+++..|+.+|||||+|+|+|||.++.+++ .+|..++...+..++++..
T Consensus 306 ~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~~ 356 (393)
T 4dmg_A 306 VDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVHRV 356 (393)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEEEE
Confidence 378999999999999999999999999888 7788888777666776653
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=94.37 E-value=0.037 Score=56.81 Aligned_cols=48 Identities=29% Similarity=0.371 Sum_probs=40.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcC--HHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVEN--EAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~EN--EaVV~~~L~~~~~~v~lvd~ 50 (519)
+++..++.+|+|||+|+|||||.+..++ +.++...+...+..++++..
T Consensus 306 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~ 355 (382)
T 1wxx_A 306 EVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVEK 355 (382)
T ss_dssp HHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEc
Confidence 5889999999999999999999888775 67777777777666887764
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=93.10 E-value=0.076 Score=54.65 Aligned_cols=47 Identities=21% Similarity=0.289 Sum_probs=37.4
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhc--CHHHHHHHHHhCCCcEEEee
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVE--NEAVVAEILRKCEGSVELVD 49 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~E--NEaVV~~~L~~~~~~v~lvd 49 (519)
+++..++.+|||||+|+|+||+.+..+ .+.++..++...+..++++.
T Consensus 316 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 316 NVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp HHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred HHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 578899999999999999999976654 46777777766665677765
No 14
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=91.85 E-value=0.1 Score=53.65 Aligned_cols=48 Identities=19% Similarity=0.252 Sum_probs=39.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChh--cCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPV--ENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~--ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
+++..++.+|+|||+|++|+||.+.. +++.+|...+...+..++++..
T Consensus 320 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~ 369 (396)
T 3c0k_A 320 DINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQ 369 (396)
T ss_dssp HHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 67889999999999999999998766 6788888777777656777653
No 15
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=87.41 E-value=0.2 Score=51.94 Aligned_cols=40 Identities=23% Similarity=0.144 Sum_probs=29.7
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 42 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~ 42 (519)
..+|..|+++||+|| ++|.||+-............+++++
T Consensus 144 ~~~l~~a~~~lk~gG-~l~vt~td~~~l~~~~~~~~~~~yg 183 (378)
T 2dul_A 144 MEFLDTALRSAKRRG-ILGVTATDGAPLCGAHPRACLRKYL 183 (378)
T ss_dssp HHHHHHHHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHHHS
T ss_pred HHHHHHHHHhcCCCC-EEEEEeecchhhccccHHHHHHHcc
Confidence 368899999999999 7899998666544444556666665
No 16
>1sqw_A Saccharomyces cerevisiae NIP7P homolog; PUA, unknown function; 1.90A {Homo sapiens} SCOP: b.122.1.1 d.17.6.3 PDB: 1t5y_A
Probab=85.10 E-value=0.55 Score=44.58 Aligned_cols=121 Identities=20% Similarity=0.236 Sum_probs=77.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEeecCCCC-----cceEEEEeCHHHHHHHHhcccCCCceEEEEceEeeEEEecCCCCC
Q 010061 290 TIINSIKTFYGIDDSFQLSGQLVSRNGDTN-----RVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFERQTSREGN 364 (519)
Q Consensus 290 ~~~~~I~~fYgI~~~FP~~~~Lv~Rn~~g~-----~~k~IYyvS~~vk~Il~~N~~~g~~LK~i~~GvK~F~rq~~~~~~ 364 (519)
.+++.+..|-|-+ . ..|+.| ++|. +.+++||+|..+...+++- .+.+++++|+.+= +-.. .
T Consensus 11 ~vf~kL~~yiG~n--~---~~li~~-~~~~~~frl~~~rVyyv~~~i~~~a~~i----~r~~l~s~Gtc~G-kftk--~- 76 (188)
T 1sqw_A 11 VMFEKIAKYIGEN--L---QLLVDR-PDGTYCFRLHNDRVYYVSEKIMKLAANI----SGDKLVSLGTCFG-KFTK--T- 76 (188)
T ss_dssp HHHHHHHHHHGGG--T---HHHHEE-TTEEEEEEEETTEEEEEEHHHHHTTTSS----CHHHHHHHSEEEE-EECT--T-
T ss_pred HHHHHHHHHhccC--H---HHHhcC-CCCceEEEecCCEEEEECHHHHHHHhcC----CcCCeeEeeeEEE-EEec--C-
Confidence 4566777776644 2 134333 2231 3589999999998876433 4678999999763 3331 1
Q ss_pred CCcceeeeccchhhhhhccccCceEEeCHHHHHHHhhcCCCCcccCCChHHHHHHhcCCCceEEEEEeC
Q 010061 365 SAPCSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSK 433 (519)
Q Consensus 365 ~~~C~~RI~qEGl~~l~p~~~kRiv~~s~edl~~LL~~~~~~~~~~~d~e~~e~~~~l~~Gc~Vl~~~~ 433 (519)
=.||++-+|+.+|.||-..| |.+..+--..+|-++++.-..+.. .=+++..|--|+++..
T Consensus 77 ---gkF~L~It~l~~La~~~~~k-V~Vk~~~E~~flyG~nVfk~~V~~-----i~e~i~~~~~VvV~n~ 136 (188)
T 1sqw_A 77 ---HKFRLHVTALDYLAPYAKYK-VWIKPGAEQSFLYGNHVLKSGLGR-----ITENTSQYQGVVVYSM 136 (188)
T ss_dssp ---SCEEECGGGHHHHGGGCSCE-EEECHHHHHHHTTTCCEEGGGEEE-----ECTTCCTTCEEEEEET
T ss_pred ---CcEEEchhHHHHhhhccCcE-EEECCCceeeEEeccchhHHhhhh-----cCCCCCCCCEEEEEeC
Confidence 38999999999999996544 566665556667776664333221 1124556777777774
No 17
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=84.73 E-value=0.69 Score=51.67 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=31.5
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
+|+..++.+|||||+|+||||+-+...++. .+..++ +++.++
T Consensus 638 ~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~----~l~~~g--~~~~~i 679 (703)
T 3v97_A 638 ALMKDLKRLLRAGGTIMFSNNKRGFRMDLD----GLAKLG--LKAQEI 679 (703)
T ss_dssp HHHHHHHHHEEEEEEEEEEECCTTCCCCHH----HHHHTT--EEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEEECCcccccCHH----HHHHcC--Cceeee
Confidence 689999999999999999999966666644 445554 554443
No 18
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=83.86 E-value=0.79 Score=42.47 Aligned_cols=37 Identities=22% Similarity=0.350 Sum_probs=30.8
Q ss_pred HHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCC
Q 010061 4 FVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEG 43 (519)
Q Consensus 4 IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~ 43 (519)
++..+..+|||||++|+++|+. ++...+..+|++.+.
T Consensus 136 ~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 136 LYDRLWEWLAPGTRIVANAVTL---ESETLLTQLHARHGG 172 (204)
T ss_dssp HHHHHHHHSCTTCEEEEEECSH---HHHHHHHHHHHHHCS
T ss_pred HHHHHHHhcCCCcEEEEEecCc---ccHHHHHHHHHhCCC
Confidence 6888999999999999999975 566777778887763
No 19
>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi}
Probab=83.55 E-value=6.9 Score=36.14 Aligned_cols=135 Identities=15% Similarity=0.075 Sum_probs=87.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEeecCCCCcceEEEEeCHHHHHHHHhcccCCCceEEEEceEeeEEE--ecCCCCCCCc
Q 010061 290 TIINSIKTFYGIDDSFQLSGQLVSRNGDTNRVKRIYYVSKSVKDALDLNFRVGQQLKITSVGLKMFER--QTSREGNSAP 367 (519)
Q Consensus 290 ~~~~~I~~fYgI~~~FP~~~~Lv~Rn~~g~~~k~IYyvS~~vk~Il~~N~~~g~~LK~i~~GvK~F~r--q~~~~~~~~~ 367 (519)
.+++.+.+| + . +..+...+.|.. ..+|||++..+.+.++.. +.++++.|+-+-.- .+++.
T Consensus 17 ~i~~~L~~y-~-~--~~~~~~~~~~~~----~~~Vy~v~~~~~~~~~~~-----~~~l~s~G~~~Gk~~~~~t~~----- 78 (166)
T 2p38_A 17 LILKEAEKY-G-E--LLHEFFCVVEGK----YRDVYAVNEEVWKIIEDI-----NMRPYSLGTFVGTIRVDENLV----- 78 (166)
T ss_dssp HHHHHHHTT-E-E--ECCCCEEEEESS----SEEEEEECHHHHHHTTTC-----CCCGGGTEEEEEEEEECTTSC-----
T ss_pred HHHHHHHHh-c-C--CCcccEEEEEcc----CcEEEEECcHHHHHhhcc-----CccceEEEEEEEEEEecccCC-----
Confidence 345555554 3 2 222334445543 488999999988775322 56778888655443 11221
Q ss_pred ceeeeccchhhhhhccccCceEEeCHHHHHHHhhcCCCCcccCCChHHHHHHhcCCCceEEEEEeCCCCCCCCCccccCC
Q 010061 368 CSFRISSEGLPVILPYITKQILYASLVDFKHLLQYKTIKFADFVDAEFGEKASKLMMGCCVIVLSKGGEALSNPIQIDAS 447 (519)
Q Consensus 368 C~~RI~qEGl~~l~p~~~kRiv~~s~edl~~LL~~~~~~~~~~~d~e~~e~~~~l~~Gc~Vl~~~~~~~~~~~~~~~~~~ 447 (519)
=.||++-+|+.+| ++ .+..|.++..-.+.+|-+.++.-+.+.+- . +..|--|++++. +. .
T Consensus 79 ~kf~pti~~l~~l-~~-~k~kV~V~~~ae~~flyG~dV~k~gI~~~------~-~~~~~~VvV~~~-~~----------~ 138 (166)
T 2p38_A 79 EKFYPNLEFFSLI-KL-EKNYVILGPKASFLFTTGKDAPKEAVREI------K-WQGSKRVVVLND-LG----------D 138 (166)
T ss_dssp EEEEECHHHHTTE-EE-CSSEEEECHHHHHHHHTTCCBCGGGEEEE------E-CSSCSEEEEECT-TS----------C
T ss_pred CeEEEehHHhhhc-cc-cccEEEECCcceEeeecCCCcchhcceEE------e-ecCCCEEEEEEC-CC----------c
Confidence 3799999999999 76 56677888888888998888766555431 1 566777878864 22 2
Q ss_pred eEEEEEe----eccceeeE
Q 010061 448 TIAIGCW----KGRASLSV 462 (519)
Q Consensus 448 ~~~l~~W----rg~~Slnl 462 (519)
.+.+..+ +|+.-.|+
T Consensus 139 pLG~G~a~~s~~gkvv~n~ 157 (166)
T 2p38_A 139 IIGIGLINPKSDRRFIKNL 157 (166)
T ss_dssp EEEEEEECTTCSTTSEEEE
T ss_pred EEEEEEEEECCCCEEEEEc
Confidence 4778888 67655444
No 20
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=82.71 E-value=0.7 Score=45.08 Aligned_cols=46 Identities=24% Similarity=0.292 Sum_probs=35.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC---hhcCHHHHHHHHHhCCCcEEEe
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN---PVENEAVVAEILRKCEGSVELV 48 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln---p~ENEaVV~~~L~~~~~~v~lv 48 (519)
++|..++.+|||||++++++|+-. +.+....+..++...+-.++.+
T Consensus 206 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 206 EFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEe
Confidence 467889999999999999999853 3455566677788777555553
No 21
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=82.70 E-value=0.82 Score=43.54 Aligned_cols=48 Identities=10% Similarity=0.081 Sum_probs=37.4
Q ss_pred HHHHHHHh-cccCCCEEEEEc-CCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGIS-LLKVGGRIVYST-CSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~-lLk~GG~lVYST-CSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
++|..+.. +|||||+||++. |++.+..+...+..+++.++..++++..
T Consensus 167 ~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~~ 216 (236)
T 2bm8_A 167 NIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDML 216 (236)
T ss_dssp HHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEETT
T ss_pred HHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEcch
Confidence 56777785 999999999975 4566677878889999988756887643
No 22
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=82.34 E-value=0.99 Score=39.55 Aligned_cols=45 Identities=22% Similarity=0.393 Sum_probs=33.5
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
++|..+..+|||||++++++++. ++...+..++++++..+.-+.+
T Consensus 108 ~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 152 (178)
T 3hm2_A 108 GVFAAAWKRLPVGGRLVANAVTV---ESEQMLWALRKQFGGTISSFAI 152 (178)
T ss_dssp THHHHHHHTCCTTCEEEEEECSH---HHHHHHHHHHHHHCCEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEeecc---ccHHHHHHHHHHcCCeeEEEEe
Confidence 47889999999999999999876 4455677777777654443333
No 23
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=82.06 E-value=0.74 Score=45.57 Aligned_cols=46 Identities=15% Similarity=-0.015 Sum_probs=37.2
Q ss_pred HHHHHHHHhcccCCCEEEEEcCC--CChhcCHHHHHHHHHhCCCcEEEe
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCS--MNPVENEAVVAEILRKCEGSVELV 48 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCS--lnp~ENEaVV~~~L~~~~~~v~lv 48 (519)
.+++..+..+|||||++|+.+|| +++.+...+++.+.+.++ .+.+.
T Consensus 185 ~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~ 232 (296)
T 1inl_A 185 EEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFP-ITRVY 232 (296)
T ss_dssp HHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCS-EEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCC-ceEEE
Confidence 36788999999999999999999 678888888888777765 35443
No 24
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=81.11 E-value=1.5 Score=39.84 Aligned_cols=45 Identities=24% Similarity=0.212 Sum_probs=34.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
++|..+.++|||||++++++++.. +...+..++++.+-.++++.+
T Consensus 123 ~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~l~~~g~~~~~~~~ 167 (204)
T 3e05_A 123 EIIDAVDRRLKSEGVIVLNAVTLD---TLTKAVEFLEDHGYMVEVACV 167 (204)
T ss_dssp HHHHHHHHHCCTTCEEEEEECBHH---HHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEecccc---cHHHHHHHHHHCCCceeEEEE
Confidence 678899999999999999988763 456667777777644454443
No 25
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=77.96 E-value=1.7 Score=44.60 Aligned_cols=41 Identities=20% Similarity=0.248 Sum_probs=32.3
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCCh--hcCHHHHHHHHHhCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNP--VENEAVVAEILRKCEG 43 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp--~ENEaVV~~~L~~~~~ 43 (519)
+|+..++.+|+|||+|++|+|+-.. .+...++..++...+.
T Consensus 312 ~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 354 (385)
T 2b78_A 312 KLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKH 354 (385)
T ss_dssp HHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCC
Confidence 5788899999999999999998764 4455667777766653
No 26
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=77.06 E-value=3.4 Score=41.96 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=28.3
Q ss_pred HHHHHHHHhcccCCC-EEEEEcCC--CChhcCHHHHHHHHH-hCC
Q 010061 2 VVFVTAGISLLKVGG-RIVYSTCS--MNPVENEAVVAEILR-KCE 42 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG-~lVYSTCS--lnp~ENEaVV~~~L~-~~~ 42 (519)
..+|.+++++||||| .++||+|+ -++.+. ..+..++. +.+
T Consensus 257 ~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~-~~~~~~l~~~~g 300 (373)
T 2qm3_A 257 RAFVGRGIATLKGPRCAGYFGITRRESSLDKW-REIQKLLLNEFN 300 (373)
T ss_dssp HHHHHHHHHTBCSTTCEEEEEECTTTCCHHHH-HHHHHHHHHTSC
T ss_pred HHHHHHHHHHcccCCeEEEEEEecCcCCHHHH-HHHHHHHHHhcC
Confidence 368899999999999 56999997 333221 45566666 655
No 27
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=74.97 E-value=3.2 Score=38.42 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=34.4
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhc-------CHHHHHHHHHhCCCcEEEeeCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVE-------NEAVVAEILRKCEGSVELVDVS 51 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~E-------NEaVV~~~L~~~~~~v~lvd~~ 51 (519)
++|..+..+|||||+|+..+.+..... ...-+..+|...| |+++.+.
T Consensus 152 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~~ 205 (235)
T 3lcc_A 152 AWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIG--FKAVSVE 205 (235)
T ss_dssp HHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGT--EEEEEEE
T ss_pred HHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcC--CeEEEEE
Confidence 578899999999999998776554332 4567788888776 6665543
No 28
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=74.43 E-value=0.62 Score=43.07 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=24.5
Q ss_pred HHHHHHhcccCCCEEEEEcCCCChhcCHHH
Q 010061 4 FVTAGISLLKVGGRIVYSTCSMNPVENEAV 33 (519)
Q Consensus 4 IL~ra~~lLk~GG~lVYSTCSlnp~ENEaV 33 (519)
++..+..+|||||+||+++|+..+.++..+
T Consensus 164 ~~~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 193 (226)
T 1i1n_A 164 VPQALIDQLKPGGRLILPVGPAGGNQMLEQ 193 (226)
T ss_dssp CCHHHHHTEEEEEEEEEEESCTTSCEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEecCCCceEEEE
Confidence 456788999999999999999887666543
No 29
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=73.96 E-value=2.3 Score=37.26 Aligned_cols=46 Identities=22% Similarity=0.257 Sum_probs=32.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
..+|..+..+|+|||++++++|+.. +..-+..++++++-.++.+.+
T Consensus 114 ~~~l~~~~~~l~~gG~l~~~~~~~~---~~~~~~~~l~~~g~~~~~~~~ 159 (192)
T 1l3i_A 114 QEILRIIKDKLKPGGRIIVTAILLE---TKFEAMECLRDLGFDVNITEL 159 (192)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECBHH---HHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEecCcc---hHHHHHHHHHHCCCceEEEEE
Confidence 3678899999999999999998743 233445666666544554443
No 30
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=73.53 E-value=2.6 Score=37.46 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=23.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCCh---hcCHHHHHHH
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNP---VENEAVVAEI 37 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp---~ENEaVV~~~ 37 (519)
++|..+..+|||||+++.+.++-.+ .|.+++..++
T Consensus 116 ~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 153 (185)
T 3mti_A 116 EAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYV 153 (185)
T ss_dssp HHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 5678889999999999888776553 3555555543
No 31
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=68.11 E-value=5.8 Score=36.15 Aligned_cols=52 Identities=10% Similarity=0.010 Sum_probs=34.3
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC----------------------ChhcCHHHHHHHHHhCCCcEEEeeCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM----------------------NPVENEAVVAEILRKCEGSVELVDVSNE 53 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl----------------------np~ENEaVV~~~L~~~~~~v~lvd~~~~ 53 (519)
.++|..+..+|||||+++.+.+.- ++.|=..-+..++.+++-.+++..+.+.
T Consensus 121 ~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 121 GAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp HHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred HHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 367889999999999888776641 3333333344777888755665555544
No 32
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=67.65 E-value=2.8 Score=38.69 Aligned_cols=43 Identities=12% Similarity=0.156 Sum_probs=27.9
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
+++... .+|||||+||+++|.... .......++.++. ++...+
T Consensus 152 ~~~~~~-~~LkpgG~lv~~~~~~~~---~~~~~~~l~~~~~-~~~~~~ 194 (221)
T 3u81_A 152 LLLEKC-GLLRKGTVLLADNVIVPG---TPDFLAYVRGSSS-FECTHY 194 (221)
T ss_dssp HHHHHT-TCCCTTCEEEESCCCCCC---CHHHHHHHHHCTT-EEEEEE
T ss_pred HHHHhc-cccCCCeEEEEeCCCCcc---hHHHHHHHhhCCC-ceEEEc
Confidence 345554 899999999999998643 2334455556553 555444
No 33
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=65.55 E-value=4.3 Score=37.30 Aligned_cols=46 Identities=20% Similarity=0.138 Sum_probs=31.2
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEee
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 49 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd 49 (519)
.++|..+.++|||||++++.+++- + +...-+..++.+.+-.++.+.
T Consensus 159 ~~~l~~~~~~LkpgG~l~~~~~~~-~-~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 159 VKLLEEAFDHLNPGGKVALYLPDK-E-KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp HHHHHHHGGGEEEEEEEEEEEESC-H-HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEeccc-H-hHHHHHHHHHHHcCCceEEEE
Confidence 367899999999999999976543 2 334455666777764444443
No 34
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=65.25 E-value=5 Score=40.45 Aligned_cols=45 Identities=16% Similarity=0.240 Sum_probs=28.2
Q ss_pred HHHHHHHHhcccCCCE-EEEEcCCCChh--cCHHHHHHHHHhCCCcEE
Q 010061 2 VVFVTAGISLLKVGGR-IVYSTCSMNPV--ENEAVVAEILRKCEGSVE 46 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~-lVYSTCSlnp~--ENEaVV~~~L~~~~~~v~ 46 (519)
.++|..++.+|||||+ ++.++|+.... +=+.++..++...+..++
T Consensus 252 ~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 252 PLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp HHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred HHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 3688999999999999 66677776532 223334444444554443
No 35
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=64.93 E-value=6.1 Score=35.41 Aligned_cols=48 Identities=15% Similarity=0.020 Sum_probs=35.4
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh------------hcCHHHHHHHHHhCCCcEEEeeCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP------------VENEAVVAEILRKCEGSVELVDVS 51 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp------------~ENEaVV~~~L~~~~~~v~lvd~~ 51 (519)
.++|..+..+|||||+++.++..... .-...-+..+|++.| ++++.+.
T Consensus 121 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~~ 180 (203)
T 3h2b_A 121 PDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAG--FQVTSSH 180 (203)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTT--EEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCC--CcEEEEE
Confidence 46788999999999999999876543 123566777788775 6766653
No 36
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=63.47 E-value=5.8 Score=35.92 Aligned_cols=47 Identities=15% Similarity=0.039 Sum_probs=34.8
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChh---------cCHHHHHHHHHhCCCcEEEeeC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPV---------ENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~---------ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
.++|..+..+|||||+++.+++..... -+..-+..+|++.| ++++.+
T Consensus 123 ~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~ 178 (219)
T 3dh0_A 123 LKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAG--IRVGRV 178 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTT--CEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCC--CEEEEE
Confidence 367889999999999999998765432 23566778888876 565554
No 37
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=62.79 E-value=1.7 Score=45.34 Aligned_cols=40 Identities=18% Similarity=0.186 Sum_probs=30.5
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEG 43 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~ 43 (519)
.+|..|+++|++|| ++|+||+-...-....+...+++++.
T Consensus 139 ~~l~~a~~~Lk~gG-ll~~t~t~~~~l~g~~~~~~~rkYg~ 178 (392)
T 3axs_A 139 PFIESVALSMKRGG-ILSLTATDTAPLSGTYPKTCMRRYMA 178 (392)
T ss_dssp HHHHHHHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHHHSS
T ss_pred HHHHHHHHHhCCCC-EEEEEecchhhhccccHHHHHHHhCC
Confidence 58899999999999 88999977664443345667777763
No 38
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=62.77 E-value=9.3 Score=34.31 Aligned_cols=23 Identities=30% Similarity=0.408 Sum_probs=19.7
Q ss_pred HHHHHHHHhcccCCCEEEEEcCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.++|.....+|||||+|+.++-.
T Consensus 132 ~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 132 IELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCCCeEEEEEecC
Confidence 46788999999999999998753
No 39
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=62.71 E-value=4.7 Score=39.35 Aligned_cols=26 Identities=38% Similarity=0.460 Sum_probs=21.6
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
.++|..+..+|||||++++++.....
T Consensus 201 ~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 201 HDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred HHHHHHHHHHcCCCcEEEEEEccccc
Confidence 36889999999999999999865544
No 40
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=62.57 E-value=2.7 Score=40.38 Aligned_cols=37 Identities=14% Similarity=0.115 Sum_probs=29.0
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 42 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~ 42 (519)
.+|+..+..+|||||+++++++.... .-+..++++.+
T Consensus 218 ~~~l~~~~~~LkpgG~l~~~~~~~~~----~~~~~~l~~~G 254 (276)
T 2b3t_A 218 VHIIEQSRNALVSGGFLLLEHGWQQG----EAVRQAFILAG 254 (276)
T ss_dssp HHHHHHHGGGEEEEEEEEEECCSSCH----HHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCEEEEEECchHH----HHHHHHHHHCC
Confidence 36788999999999999999776543 55677777765
No 41
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=62.16 E-value=4 Score=40.93 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=25.4
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHH
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEI 37 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~ 37 (519)
+++..++.+|++||+|+|++|+.. .+.....+
T Consensus 272 ~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~l 303 (336)
T 2yx1_A 272 KFIDKALDIVEEGGVIHYYTIGKD---FDKAIKLF 303 (336)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEESS---SHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEEEeecC---chHHHHHH
Confidence 468889999999999999999998 34444433
No 42
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=61.62 E-value=8.3 Score=35.03 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=34.7
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC----------------------ChhcCHHHHHHHHHhCCCcEEEeeCCCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM----------------------NPVENEAVVAEILRKCEGSVELVDVSNEVP 55 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl----------------------np~ENEaVV~~~L~~~~~~v~lvd~~~~lp 55 (519)
.++|..+..+|||||.++.+.++- ++.|=..-+..++++++-.+++..+.+.-|
T Consensus 121 ~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~ 196 (219)
T 3jwg_A 121 QAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDD 196 (219)
T ss_dssp HHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCT
T ss_pred HHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEecCCccc
Confidence 367889999999999777766542 222222333477777776666666655433
No 43
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=61.27 E-value=2.4 Score=40.75 Aligned_cols=43 Identities=12% Similarity=0.097 Sum_probs=29.1
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
++|..+..+|||||+|++++|+.+.. .-+...|...+ +..+.+
T Consensus 192 ~~l~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~l~~~G--f~~~~~ 234 (275)
T 1yb2_A 192 NHVQKIASMMKPGSVATFYLPNFDQS---EKTVLSLSASG--MHHLET 234 (275)
T ss_dssp GSHHHHHHTEEEEEEEEEEESSHHHH---HHHHHHSGGGT--EEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEeCCHHHH---HHHHHHHHHCC--CeEEEE
Confidence 46888999999999999999987432 22334444443 555544
No 44
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=60.04 E-value=6 Score=36.80 Aligned_cols=25 Identities=28% Similarity=0.115 Sum_probs=21.2
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
++|..+..+|||||+++.++++..+
T Consensus 131 ~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 131 RGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHcCCCcEEEEEEeeccC
Confidence 5788999999999999999976433
No 45
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=59.18 E-value=8.4 Score=34.92 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=20.9
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
++|..+..+|||||+|+.+++...
T Consensus 122 ~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 122 RIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred HHHHHHHHHcCCCeEEEEEECCcc
Confidence 688999999999999999987554
No 46
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=59.17 E-value=8 Score=36.61 Aligned_cols=24 Identities=8% Similarity=0.140 Sum_probs=21.2
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
..|..+..+|||||+||+.+|...
T Consensus 151 ~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 151 HYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp HHHHHHHHTCCTTCEEEEECCSGG
T ss_pred HHHHHHHHhcCCCeEEEEeCCCcC
Confidence 578889999999999999988765
No 47
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=58.89 E-value=6.5 Score=36.64 Aligned_cols=23 Identities=17% Similarity=0.108 Sum_probs=19.6
Q ss_pred HHHHHHHHhcccCCCEEEEEcCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.++|..+.++|||||+++.++.+
T Consensus 125 ~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 125 DDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEeCC
Confidence 36788999999999999998654
No 48
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=58.55 E-value=6.1 Score=37.30 Aligned_cols=26 Identities=27% Similarity=0.212 Sum_probs=22.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPV 28 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ 28 (519)
++|..+..+|||||+++.++++..+.
T Consensus 131 ~~l~~~~~~LkpgG~l~~~~~~~~~~ 156 (267)
T 3kkz_A 131 RGLNEWRKYLKKGGYLAVSECSWFTD 156 (267)
T ss_dssp HHHHHHGGGEEEEEEEEEEEEEESSS
T ss_pred HHHHHHHHHcCCCCEEEEEEeeecCC
Confidence 57889999999999999999875443
No 49
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=57.17 E-value=7.9 Score=36.84 Aligned_cols=22 Identities=32% Similarity=0.339 Sum_probs=19.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTC 23 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTC 23 (519)
.++|.+...+|||||++|.|+.
T Consensus 177 ~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 177 RAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEe
Confidence 3678889999999999999974
No 50
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=56.59 E-value=9.2 Score=34.62 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=34.2
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
.++|..+..+|||||+++.+++... ..+..-+..+|.+.| ++++..
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~-~~~~~~~~~~l~~~G--f~~~~~ 176 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSR-FEDVRTFLRAVTKLG--FKIVSK 176 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGG-CSCHHHHHHHHHHTT--EEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCC-CCCHHHHHHHHHHCC--CEEEEE
Confidence 3578889999999999999876542 235667778888876 666654
No 51
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=56.30 E-value=7 Score=36.83 Aligned_cols=25 Identities=24% Similarity=0.454 Sum_probs=21.4
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
..++..++++|||||+||+.+|-..
T Consensus 161 ~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 161 IKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp HHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred HHHHHHHHHhcCCCeEEEEecCCcC
Confidence 3578899999999999999998654
No 52
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=55.42 E-value=7 Score=34.90 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=21.4
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
.++|..+..+|||||+++.++++-.+
T Consensus 119 ~~~l~~~~~~Lk~gG~l~~~~~~~~~ 144 (197)
T 3eey_A 119 IQALSKAMELLVTGGIITVVIYYGGD 144 (197)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCBTT
T ss_pred HHHHHHHHHhCcCCCEEEEEEccCCC
Confidence 36899999999999999988765443
No 53
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=54.33 E-value=13 Score=33.08 Aligned_cols=26 Identities=15% Similarity=0.102 Sum_probs=21.2
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
.++|..+..+|||||+++.++.+...
T Consensus 111 ~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 111 QQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccc
Confidence 35788899999999999999865443
No 54
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=53.21 E-value=11 Score=34.62 Aligned_cols=25 Identities=16% Similarity=0.175 Sum_probs=21.4
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
++|..+..+|||||+++.++.....
T Consensus 129 ~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 129 ELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred HHHHHHHHhcCCCcEEEEEEecCCC
Confidence 5889999999999999999876543
No 55
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=52.95 E-value=17 Score=34.89 Aligned_cols=42 Identities=14% Similarity=0.219 Sum_probs=33.1
Q ss_pred CHHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEee
Q 010061 1 MVVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 49 (519)
Q Consensus 1 ~~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd 49 (519)
|.+||..+...|++||++|.|.- .+...|...|..++ |.+++
T Consensus 98 i~~Il~~~~~~L~~~~~lVlq~~-----~~~~~vr~~L~~~G--f~i~~ 139 (225)
T 3kr9_A 98 IARILEEGLGKLANVERLILQPN-----NREDDLRIWLQDHG--FQIVA 139 (225)
T ss_dssp HHHHHHHTGGGCTTCCEEEEEES-----SCHHHHHHHHHHTT--EEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECC-----CCHHHHHHHHHHCC--CEEEE
Confidence 36899999999999999999765 36677777787775 66655
No 56
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=52.51 E-value=13 Score=34.51 Aligned_cols=23 Identities=13% Similarity=-0.019 Sum_probs=19.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.+|..+..+|||||+++.++.+.
T Consensus 179 ~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 179 KVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp GGHHHHHHHEEEEEEEEEEESCH
T ss_pred HHHHHHHHhCCCCCEEEEEeCCH
Confidence 46888999999999999888655
No 57
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=51.69 E-value=9.3 Score=36.81 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=23.0
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPV 28 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ 28 (519)
.++|..+..+|||||+|+.++......
T Consensus 170 ~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 170 RGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 467889999999999999999887653
No 58
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=51.58 E-value=7.9 Score=34.34 Aligned_cols=23 Identities=17% Similarity=0.338 Sum_probs=20.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.+|..+..+|||||++|.+++..
T Consensus 126 ~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 126 TLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHHHHhcCCCEEEEEecCC
Confidence 67888999999999999988754
No 59
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=51.24 E-value=9.1 Score=36.23 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=20.7
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.++|..+..+|||||+++.+++..
T Consensus 154 ~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 154 DIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHhcCCCCEEEEEECCH
Confidence 367888999999999999999764
No 60
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=49.59 E-value=19 Score=31.20 Aligned_cols=47 Identities=15% Similarity=-0.014 Sum_probs=33.6
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVS 51 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~~ 51 (519)
.++|..+..+|||||+++.++.+... -...-+..+|.+.+ ++++.+.
T Consensus 127 ~~~l~~~~~~l~~~G~l~~~~~~~~~-~~~~~~~~~l~~~G--f~~~~~~ 173 (195)
T 3cgg_A 127 EPALANIHRALGADGRAVIGFGAGRG-WVFGDFLEVAERVG--LELENAF 173 (195)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEETTSS-CCHHHHHHHHHHHT--EEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEeCCCCC-cCHHHHHHHHHHcC--CEEeeee
Confidence 46788999999999999998765443 23455666777765 6766653
No 61
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=49.30 E-value=6.6 Score=36.30 Aligned_cols=25 Identities=16% Similarity=0.244 Sum_probs=20.8
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++|..+..+|||||+||+++|.+.
T Consensus 140 ~~~l~~~~~~L~pgG~lv~~~~~~~ 164 (233)
T 2gpy_A 140 RRFFDMYSPMVRPGGLILSDNVLFR 164 (233)
T ss_dssp HHHHHHHGGGEEEEEEEEEETTTC-
T ss_pred HHHHHHHHHHcCCCeEEEEEcCCcC
Confidence 3678899999999999999987553
No 62
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=49.14 E-value=4.4 Score=37.17 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=24.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 40 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~ 40 (519)
.+|..|..+|||||++|..+ ..-++...+.+.|++
T Consensus 120 ~~l~~a~~~LkpGG~lv~k~---~~~~~~~~~~~~l~~ 154 (191)
T 3dou_A 120 RVMEIAVRYLRNGGNVLLKQ---FQGDMTNDFIAIWRK 154 (191)
T ss_dssp HHHHHHHHHEEEEEEEEEEE---ECSTHHHHHHHHHGG
T ss_pred HHHHHHHHHccCCCEEEEEE---cCCCCHHHHHHHHHH
Confidence 56888999999999998554 334444555666654
No 63
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=49.02 E-value=6.2 Score=35.58 Aligned_cols=43 Identities=12% Similarity=0.106 Sum_probs=31.1
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
++|..+..+||+||+++.++.... ....+..++.+.+ ++++.+
T Consensus 140 ~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~~~~~~G--f~~~~~ 182 (205)
T 3grz_A 140 DLIPQLDSHLNEDGQVIFSGIDYL---QLPKIEQALAENS--FQIDLK 182 (205)
T ss_dssp HHGGGSGGGEEEEEEEEEEEEEGG---GHHHHHHHHHHTT--EEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEecCcc---cHHHHHHHHHHcC--CceEEe
Confidence 567788899999999999876543 3455667777765 666654
No 64
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=48.89 E-value=17 Score=32.84 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=21.9
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhc
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVE 29 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~E 29 (519)
++|..+..+|||||+++.++..+...+
T Consensus 126 ~~l~~~~~~LkpgG~l~i~~~~~~~~~ 152 (220)
T 3hnr_A 126 VAIAKYSQLLNKGGKIVFADTIFADQD 152 (220)
T ss_dssp HHHHHHHHHSCTTCEEEEEEECBSSHH
T ss_pred HHHHHHHHhcCCCCEEEEEeccccChH
Confidence 488899999999999999986655433
No 65
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=48.45 E-value=13 Score=34.57 Aligned_cols=21 Identities=33% Similarity=0.275 Sum_probs=18.3
Q ss_pred HHHHHHHhcccCCCEEEEEcC
Q 010061 3 VFVTAGISLLKVGGRIVYSTC 23 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTC 23 (519)
++|..+..+|||||+|+.++.
T Consensus 179 ~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 179 TALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHhhCCCCcEEEEEec
Confidence 578889999999999999873
No 66
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=47.65 E-value=18 Score=32.52 Aligned_cols=41 Identities=17% Similarity=-0.010 Sum_probs=31.6
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChh-----------cCHHHHHHHHHhCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPV-----------ENEAVVAEILRKCE 42 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~-----------ENEaVV~~~L~~~~ 42 (519)
.++|..+..+|||||+++.+++..... -+..-+..+|++.|
T Consensus 121 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 172 (211)
T 3e23_A 121 ADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAG 172 (211)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCC
Confidence 367889999999999999998765432 25667778888776
No 67
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=47.53 E-value=14 Score=35.10 Aligned_cols=24 Identities=21% Similarity=0.256 Sum_probs=20.5
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
++|..+..+|||||+++.++....
T Consensus 149 ~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 149 AFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp HHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEEEecCC
Confidence 678899999999999999886643
No 68
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=45.89 E-value=13 Score=35.07 Aligned_cols=36 Identities=28% Similarity=0.373 Sum_probs=26.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 42 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~ 42 (519)
.+|..+..+|||||++++.. +.+...-+..++++++
T Consensus 157 ~~l~~~~~~LkpgG~l~~~~----~~~~~~~~~~~l~~~~ 192 (259)
T 3lpm_A 157 DTIRVAASLLKQGGKANFVH----RPERLLDIIDIMRKYR 192 (259)
T ss_dssp HHHHHHHHHEEEEEEEEEEE----CTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHccCCcEEEEEE----cHHHHHHHHHHHHHCC
Confidence 47889999999999999943 3344555666677664
No 69
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=45.86 E-value=16 Score=33.34 Aligned_cols=24 Identities=13% Similarity=0.004 Sum_probs=20.4
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
++|..+..+|||||+++.++....
T Consensus 134 ~~l~~~~~~L~pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 134 RALNEIKRVLKSDGYACIAILGPT 157 (242)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECTT
T ss_pred HHHHHHHHHhCCCeEEEEEEcCCc
Confidence 678899999999999999985543
No 70
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=45.85 E-value=12 Score=34.61 Aligned_cols=25 Identities=12% Similarity=0.135 Sum_probs=20.5
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++|..+..+|||||+++.++.+..
T Consensus 139 ~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 139 NKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred HHHHHHHHHHcCCCCEEEEEEeccC
Confidence 3578899999999999999886443
No 71
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=45.55 E-value=18 Score=33.25 Aligned_cols=41 Identities=12% Similarity=0.176 Sum_probs=28.5
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh------------hcCHHHHHHHHHhCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP------------VENEAVVAEILRKCE 42 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp------------~ENEaVV~~~L~~~~ 42 (519)
.++|..+..+|||||+++.++..... .-...-+..+|++.|
T Consensus 177 ~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 229 (254)
T 1xtp_A 177 VKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESG 229 (254)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCC
Confidence 36788899999999999999842211 123456677777765
No 72
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=44.82 E-value=7.9 Score=34.47 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=24.0
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHH
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILR 39 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~ 39 (519)
.+++..+..+|||||++++..++. ....-+..++.
T Consensus 144 ~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~ 178 (215)
T 4dzr_A 144 RRMAALPPYVLARGRAGVFLEVGH---NQADEVARLFA 178 (215)
T ss_dssp HHHHTCCGGGBCSSSEEEEEECTT---SCHHHHHHHTG
T ss_pred HHHHHHHHHHhcCCCeEEEEEECC---ccHHHHHHHHH
Confidence 456778889999999955555553 33455566666
No 73
>2hlg_A Fruit-specific protein; beta antiparallel, plant protein; NMR {Lycopersicon esculentum}
Probab=44.68 E-value=5.9 Score=27.94 Aligned_cols=12 Identities=42% Similarity=0.841 Sum_probs=8.9
Q ss_pred CCEEEEEcCCCCh
Q 010061 15 GGRIVYSTCSMNP 27 (519)
Q Consensus 15 GG~lVYSTCSlnp 27 (519)
+|. .|||||+.|
T Consensus 28 ~G~-ty~~Cs~lP 39 (39)
T 2hlg_A 28 YGL-TYRTCNLLP 39 (39)
T ss_dssp SCC-EEEEEESCC
T ss_pred CCc-cceeeccCC
Confidence 443 399999976
No 74
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=44.52 E-value=11 Score=35.16 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=28.1
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 42 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~ 42 (519)
.++..+..+|||||++++..+.....|-+.+ ...++.++
T Consensus 155 ~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~-~~~l~~~g 193 (240)
T 1xdz_A 155 VLSELCLPLVKKNGLFVALKAASAEEELNAG-KKAITTLG 193 (240)
T ss_dssp HHHHHHGGGEEEEEEEEEEECC-CHHHHHHH-HHHHHHTT
T ss_pred HHHHHHHHhcCCCCEEEEEeCCCchHHHHHH-HHHHHHcC
Confidence 5788889999999999999887766554443 34566665
No 75
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=44.34 E-value=21 Score=34.31 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=22.2
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
.++|..+..+|||||+++.++++...
T Consensus 163 ~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 163 DTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp HHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred HHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 36889999999999999999887654
No 76
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=44.27 E-value=37 Score=31.24 Aligned_cols=47 Identities=15% Similarity=0.101 Sum_probs=32.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChh---------------cCHHHHHHHHHhCCCcEEEeeC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPV---------------ENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~---------------ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
.++|..+..+|||||+++.++...... =...-+..+|++.| ++++.+
T Consensus 120 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aG--f~~~~~ 181 (240)
T 3dli_A 120 FELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLG--FRDVKI 181 (240)
T ss_dssp HHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHT--CEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCC--CeEEEE
Confidence 367889999999999999988653321 12355667777776 444443
No 77
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=43.89 E-value=14 Score=32.84 Aligned_cols=35 Identities=9% Similarity=0.102 Sum_probs=25.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 40 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~ 40 (519)
.+|..+..+|||||+++.++.. .++...+.+.|+.
T Consensus 135 ~~l~~~~~~LkpgG~lv~~~~~---~~~~~~l~~~l~~ 169 (201)
T 2plw_A 135 SITHFMEQYINIGGTYIVKMYL---GSQTNNLKTYLKG 169 (201)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEC---STTHHHHHHHHHT
T ss_pred HHHHHHHHHccCCCEEEEEEeC---CCCHHHHHHHHHH
Confidence 4788899999999999987644 2344455566654
No 78
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=42.39 E-value=21 Score=32.44 Aligned_cols=24 Identities=13% Similarity=0.191 Sum_probs=20.3
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++..+..+|||||+||...+...
T Consensus 148 ~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 148 AYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp HHHHHHHHTCCTTCEEEEESCSGG
T ss_pred HHHHHHHHhcCCCcEEEEeCCCcC
Confidence 578889999999999998877664
No 79
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=42.31 E-value=18 Score=32.04 Aligned_cols=42 Identities=10% Similarity=-0.031 Sum_probs=29.4
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
.++.+.+..| |||+++.++.+.. ...-+..+|++.+ ++.+.+
T Consensus 105 ~~~~~~~~~l-pgG~l~~~~~~~~---~~~~l~~~l~~~g--f~~~~~ 146 (170)
T 3q87_B 105 EVIDRFVDAV-TVGMLYLLVIEAN---RPKEVLARLEERG--YGTRIL 146 (170)
T ss_dssp HHHHHHHHHC-CSSEEEEEEEGGG---CHHHHHHHHHHTT--CEEEEE
T ss_pred HHHHHHHhhC-CCCEEEEEEecCC---CHHHHHHHHHHCC--CcEEEE
Confidence 5677788888 9999999886653 4455677777765 444443
No 80
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=41.66 E-value=7.9 Score=35.92 Aligned_cols=19 Identities=21% Similarity=0.233 Sum_probs=16.6
Q ss_pred HHHHHHhcccCCCEEEEEc
Q 010061 4 FVTAGISLLKVGGRIVYST 22 (519)
Q Consensus 4 IL~ra~~lLk~GG~lVYST 22 (519)
+|..+..+|||||+++++.
T Consensus 143 ~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 143 LKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCEEEEEE
Confidence 3788899999999999984
No 81
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=41.57 E-value=23 Score=32.08 Aligned_cols=20 Identities=5% Similarity=0.139 Sum_probs=17.3
Q ss_pred HHHHHHHhcccCCCEEEEEc
Q 010061 3 VFVTAGISLLKVGGRIVYST 22 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYST 22 (519)
++|..+..+|||||+++++.
T Consensus 121 ~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 121 EMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEe
Confidence 57888999999999999854
No 82
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=41.24 E-value=9.6 Score=33.98 Aligned_cols=24 Identities=21% Similarity=0.248 Sum_probs=21.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.++|..+..+|||||+++.++++.
T Consensus 139 ~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 139 DQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHhCcCCCEEEEEeCCC
Confidence 467889999999999999999875
No 83
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=40.54 E-value=19 Score=33.76 Aligned_cols=21 Identities=24% Similarity=0.232 Sum_probs=18.5
Q ss_pred HHHHHHHhcccCCCEEEEEcC
Q 010061 3 VFVTAGISLLKVGGRIVYSTC 23 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTC 23 (519)
.+|..+..+|||||+|+.+|-
T Consensus 154 ~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 154 TLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHcCCCCEEEEEec
Confidence 688999999999999999763
No 84
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=40.39 E-value=24 Score=30.32 Aligned_cols=43 Identities=16% Similarity=0.057 Sum_probs=28.9
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
.+|..+.++ +||++++++|+.... .-+...|++++-.++.+..
T Consensus 114 ~~l~~~~~~--~gG~l~~~~~~~~~~---~~~~~~l~~~g~~~~~~~~ 156 (183)
T 2yxd_A 114 KIIEILDKK--KINHIVANTIVLENA---AKIINEFESRGYNVDAVNV 156 (183)
T ss_dssp HHHHHHHHT--TCCEEEEEESCHHHH---HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHhhC--CCCEEEEEecccccH---HHHHHHHHHcCCeEEEEEe
Confidence 456666666 999999999876543 3356667777755665543
No 85
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=40.35 E-value=14 Score=35.38 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=28.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCE 42 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~ 42 (519)
.++..+..+|||||++++..|.....|-+. +...+..++
T Consensus 165 ~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~-~~~~l~~~G 203 (249)
T 3g89_A 165 VLSELLLPFLEVGGAAVAMKGPRVEEELAP-LPPALERLG 203 (249)
T ss_dssp HHHHHHGGGEEEEEEEEEEECSCCHHHHTT-HHHHHHHHT
T ss_pred HHHHHHHHHcCCCeEEEEEeCCCcHHHHHH-HHHHHHHcC
Confidence 578889999999999998888755444333 344556665
No 86
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=40.29 E-value=23 Score=32.17 Aligned_cols=24 Identities=17% Similarity=0.296 Sum_probs=20.2
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
++|..+..+|||||+++.++....
T Consensus 120 ~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 120 RALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECSS
T ss_pred HHHHHHHHHcCCCcEEEEEEeCCc
Confidence 578889999999999999886543
No 87
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=40.22 E-value=24 Score=32.00 Aligned_cols=23 Identities=17% Similarity=0.205 Sum_probs=19.5
Q ss_pred HHHHHHH-hcccCCCEEEEEcCCC
Q 010061 3 VFVTAGI-SLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~-~lLk~GG~lVYSTCSl 25 (519)
++|..+. .+|||||+|+.++...
T Consensus 121 ~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 121 ALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEECT
T ss_pred HHHHHHHHHhcCCCCEEEEEcCCh
Confidence 5788889 9999999999988543
No 88
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=39.79 E-value=20 Score=32.63 Aligned_cols=23 Identities=26% Similarity=0.352 Sum_probs=19.2
Q ss_pred HHHHHHHHhcccCCCEEEEEcCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.++|..+..+|||||+++.++.+
T Consensus 122 ~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 122 KKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEecC
Confidence 36788899999999999987653
No 89
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=39.23 E-value=15 Score=35.10 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=29.3
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
++|..+..+|||||+|++.+++.+.. +.+ ...|+..+ +..+.+
T Consensus 194 ~~l~~~~~~L~pgG~l~~~~~~~~~~--~~~-~~~l~~~g--f~~~~~ 236 (277)
T 1o54_A 194 NYIDKCWEALKGGGRFATVCPTTNQV--QET-LKKLQELP--FIRIEV 236 (277)
T ss_dssp GTHHHHHHHEEEEEEEEEEESSHHHH--HHH-HHHHHHSS--EEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEeCCHHHH--HHH-HHHHHHCC--CceeEE
Confidence 46788899999999999999876443 233 34455543 555544
No 90
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=39.18 E-value=17 Score=32.83 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=25.7
Q ss_pred HHHHHHHhcccCCCEEEEEcCC------CChhcCHHHHHHHHHh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS------MNPVENEAVVAEILRK 40 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS------lnp~ENEaVV~~~L~~ 40 (519)
++|..+..+|||||+++++|.. +....+..-+..++..
T Consensus 135 ~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (216)
T 3ofk_A 135 TAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTE 178 (216)
T ss_dssp HHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHh
Confidence 5788999999999999998732 2224444444555543
No 91
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=39.11 E-value=15 Score=34.34 Aligned_cols=23 Identities=30% Similarity=0.534 Sum_probs=20.7
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
+.+..++.+|||||+||+..+.+
T Consensus 144 ~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 144 ALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp HHHHHHHHHEEEEEEEEETTTTG
T ss_pred HHHHHHHHHcCCCcEEEEeCCCC
Confidence 57889999999999999998877
No 92
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=38.67 E-value=16 Score=33.97 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=21.3
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++..++.+|||||+||+..|.+.
T Consensus 163 ~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 163 RYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp HHHHHHHHTEEEEEEEEEECTTGG
T ss_pred HHHHHHHHHcCCCeEEEEeCCCcC
Confidence 578889999999999999988875
No 93
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=38.29 E-value=21 Score=31.71 Aligned_cols=32 Identities=16% Similarity=0.122 Sum_probs=23.6
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHH
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAV 33 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaV 33 (519)
.++|..+..+|||||+++.++...++.-.+.+
T Consensus 128 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 159 (219)
T 3dlc_A 128 ATAFREIYRILKSGGKTYIGGGFGNKELRDSI 159 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCSSHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEEeccCcHHHHHHH
Confidence 36788999999999999998766555333333
No 94
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=38.01 E-value=18 Score=35.87 Aligned_cols=38 Identities=24% Similarity=0.428 Sum_probs=25.0
Q ss_pred HHHHHHHhcccCCCEEEEEcC-CCChhcCHHHHHHHHHh
Q 010061 3 VFVTAGISLLKVGGRIVYSTC-SMNPVENEAVVAEILRK 40 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTC-Slnp~ENEaVV~~~L~~ 40 (519)
.+|.+++.+||+||++++.++ ++.-.....-+...|..
T Consensus 237 ~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~ 275 (344)
T 2f8l_A 237 LFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKK 275 (344)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHh
Confidence 478999999999999998873 22222334444444443
No 95
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=38.01 E-value=30 Score=31.82 Aligned_cols=46 Identities=20% Similarity=0.212 Sum_probs=32.3
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCCh-----------hcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNP-----------VENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp-----------~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
++|..+..+|||||+++.++..... .-+..-+..+|++.| ++++.+
T Consensus 166 ~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG--f~~~~~ 222 (241)
T 2ex4_A 166 EFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAG--LSLLAE 222 (241)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTT--CCEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcC--CeEEEe
Confidence 6788999999999999998753321 114666778888876 444443
No 96
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=37.83 E-value=9.5 Score=34.11 Aligned_cols=25 Identities=16% Similarity=0.082 Sum_probs=21.4
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++|..+.++|||||+++.++++..
T Consensus 108 ~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 108 KEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHcCCCcEEEEEEeccc
Confidence 3578888999999999999998764
No 97
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=37.53 E-value=12 Score=33.99 Aligned_cols=25 Identities=20% Similarity=0.117 Sum_probs=21.4
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++|..+..+|||||+++.+++...
T Consensus 121 ~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 121 GAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp HHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHhcCCCeEEEEEeccCc
Confidence 3678899999999999999987664
No 98
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=37.05 E-value=55 Score=32.62 Aligned_cols=26 Identities=4% Similarity=0.022 Sum_probs=21.6
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
.+||.++.+.|||||+|+.....+..
T Consensus 267 ~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 267 ISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred HHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 47899999999999999887765544
No 99
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=36.75 E-value=14 Score=33.39 Aligned_cols=24 Identities=4% Similarity=-0.121 Sum_probs=20.5
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++..+..+|||||+||+.+|-..
T Consensus 141 ~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 141 DVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp HHHHHHGGGEEEEEEEEEESSSSC
T ss_pred HHHHHHHHhcCCCeEEEEECcccc
Confidence 578899999999999999887653
No 100
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=36.64 E-value=28 Score=32.97 Aligned_cols=23 Identities=17% Similarity=0.195 Sum_probs=20.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
++|..+..+|||||+++.++.+.
T Consensus 154 ~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 154 SVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEBH
T ss_pred HHHHHHHHHcCCCeEEEEEEeCC
Confidence 57889999999999999988654
No 101
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=36.53 E-value=54 Score=32.40 Aligned_cols=25 Identities=16% Similarity=0.242 Sum_probs=21.0
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++|.++..+|||||+|+.....+.
T Consensus 266 ~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 266 VRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred HHHHHHHHHhcCCCCEEEEEEeccC
Confidence 4789999999999999988776443
No 102
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=36.13 E-value=41 Score=32.33 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=32.7
Q ss_pred CHHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEee
Q 010061 1 MVVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 49 (519)
Q Consensus 1 ~~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd 49 (519)
|.+||..+...|+++|++|-|.- .++..|...|..++ |.+++
T Consensus 104 I~~IL~~~~~~l~~~~~lIlqp~-----~~~~~lr~~L~~~G--f~i~~ 145 (230)
T 3lec_A 104 IADILNNDIDKLQHVKTLVLQPN-----NREDDLRKWLAAND--FEIVA 145 (230)
T ss_dssp HHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHTT--EEEEE
T ss_pred HHHHHHHHHHHhCcCCEEEEECC-----CChHHHHHHHHHCC--CEEEE
Confidence 46899999999999999998773 35777777777765 66655
No 103
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=36.07 E-value=12 Score=34.06 Aligned_cols=23 Identities=17% Similarity=-0.032 Sum_probs=18.2
Q ss_pred HHHHH--HhcccCCCEEEEEcCCCC
Q 010061 4 FVTAG--ISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 4 IL~ra--~~lLk~GG~lVYSTCSln 26 (519)
+|... ..+|||||++++++|+..
T Consensus 143 ~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 143 AISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp HHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHHHHHhcCccCCCcEEEEEECCCC
Confidence 44444 567999999999999876
No 104
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=35.92 E-value=33 Score=32.66 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=17.6
Q ss_pred HHHHHHHhcccCCCEEEEEc
Q 010061 3 VFVTAGISLLKVGGRIVYST 22 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYST 22 (519)
++|..+..+|||||+|+.+.
T Consensus 196 ~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 196 RALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 57888999999999999874
No 105
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=35.77 E-value=11 Score=38.19 Aligned_cols=20 Identities=20% Similarity=0.441 Sum_probs=16.7
Q ss_pred HHHHhcccCCCEEEEEcCCC
Q 010061 6 TAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 6 ~ra~~lLk~GG~lVYSTCSl 25 (519)
..++++|++||+|||.+|+.
T Consensus 310 ~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 310 SETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp HHHHHHHTTSSEEEEEESCH
T ss_pred HHHHHHHhCCCEEEEEECCH
Confidence 45677888999999999964
No 106
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=35.36 E-value=18 Score=33.23 Aligned_cols=21 Identities=24% Similarity=0.339 Sum_probs=18.6
Q ss_pred HHHHHHHhcccCCCEEEEEcC
Q 010061 3 VFVTAGISLLKVGGRIVYSTC 23 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTC 23 (519)
.+|..+..+|||||+|+++|-
T Consensus 134 ~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 134 HFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp HHHHHHHHHHTTSCEEEEEES
T ss_pred HHHHHHHHHcCCCCEEEEEeC
Confidence 578889999999999999874
No 107
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=35.30 E-value=26 Score=32.79 Aligned_cols=23 Identities=13% Similarity=0.249 Sum_probs=19.8
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
++|..+..+|||||+++.++...
T Consensus 147 ~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 147 RALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEEeec
Confidence 57889999999999999988654
No 108
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=35.23 E-value=11 Score=33.84 Aligned_cols=24 Identities=17% Similarity=0.189 Sum_probs=21.4
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
..+|..+..+|||||+++.++.+.
T Consensus 126 ~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 126 EAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCeEEEEEeCCC
Confidence 467889999999999999999876
No 109
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=35.21 E-value=26 Score=33.38 Aligned_cols=24 Identities=13% Similarity=0.080 Sum_probs=20.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.++|..+..+|||||+|+.++...
T Consensus 167 ~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 167 LKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEEecc
Confidence 367889999999999999987643
No 110
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=35.07 E-value=12 Score=36.94 Aligned_cols=22 Identities=18% Similarity=0.318 Sum_probs=19.8
Q ss_pred HHHHHHHhcccCCCEEEEEcCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.+|.....+|||||+++.+|+.
T Consensus 150 ~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 150 TVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEEeCC
Confidence 5788999999999999999875
No 111
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=34.85 E-value=9.2 Score=35.97 Aligned_cols=20 Identities=30% Similarity=0.537 Sum_probs=16.8
Q ss_pred HHHHHHHhcccCCCEEEEEc
Q 010061 3 VFVTAGISLLKVGGRIVYST 22 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYST 22 (519)
.++..+..+|||||+++|.+
T Consensus 151 ~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 151 FIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHHTHHHHEEEEEEEEECC
T ss_pred hhhhhhhheeCCCCEEEEEe
Confidence 46778889999999999854
No 112
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=34.41 E-value=57 Score=31.78 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=21.0
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
.+||.+...+|||||+|+.....+..
T Consensus 254 ~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 254 VAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred HHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 47899999999999999887765543
No 113
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=33.19 E-value=17 Score=33.61 Aligned_cols=24 Identities=17% Similarity=-0.021 Sum_probs=20.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.++|..+..+|||||+|+.++...
T Consensus 120 ~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 120 AGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp HHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEecCcc
Confidence 467889999999999999987543
No 114
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=32.34 E-value=53 Score=32.16 Aligned_cols=19 Identities=21% Similarity=0.086 Sum_probs=15.6
Q ss_pred HHHHHHhcccCCCEEEEEc
Q 010061 4 FVTAGISLLKVGGRIVYST 22 (519)
Q Consensus 4 IL~ra~~lLk~GG~lVYST 22 (519)
+|..+..+|||||+|+..+
T Consensus 201 ~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 201 TLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp THHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEe
Confidence 5788899999999988443
No 115
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=32.21 E-value=38 Score=31.25 Aligned_cols=23 Identities=22% Similarity=0.172 Sum_probs=19.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
++|..+..+|||||+++.+++..
T Consensus 105 ~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 105 KAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECB
T ss_pred HHHHHHHHHcCCCcEEEEEEcCC
Confidence 57888999999999999987654
No 116
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=32.21 E-value=15 Score=34.88 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=20.9
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.++|..+..+|||||+++.++++.
T Consensus 155 ~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 155 RLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHcCCCeEEEEEeCCH
Confidence 368899999999999999998863
No 117
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=31.62 E-value=22 Score=32.95 Aligned_cols=24 Identities=21% Similarity=0.325 Sum_probs=20.7
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++..+..+|||||+||..+|...
T Consensus 162 ~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 162 NYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp HHHHHHHHHEEEEEEEEEECSSGG
T ss_pred HHHHHHHHHcCCCeEEEEEccccC
Confidence 578889999999999999987654
No 118
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=31.55 E-value=26 Score=31.82 Aligned_cols=44 Identities=18% Similarity=0.136 Sum_probs=27.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVS 51 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~~ 51 (519)
.+|..+..+|||||+++.+|-...- -+ -+...+..++ ++++.+.
T Consensus 137 ~~l~~~~~~LkpgG~l~~~~~~~~~--~~-~~~~~~~~~g--~~~~~~~ 180 (214)
T 1yzh_A 137 TFLDTFKRILPENGEIHFKTDNRGL--FE-YSLVSFSQYG--MKLNGVW 180 (214)
T ss_dssp HHHHHHHHHSCTTCEEEEEESCHHH--HH-HHHHHHHHHT--CEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEeCCHHH--HH-HHHHHHHHCC--Ceeeecc
Confidence 5888999999999999998742111 12 2334455554 5555443
No 119
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=31.40 E-value=30 Score=34.75 Aligned_cols=46 Identities=17% Similarity=0.260 Sum_probs=31.8
Q ss_pred HHHHHHHhcccCCCEEEEEcCC--CChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS--MNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS--lnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
.+|.+++++|++||++++.+++ ++-...+.+.+.+++.. . ..++.+
T Consensus 145 ~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~-~-~~i~~l 192 (421)
T 2ih2_A 145 AFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREG-K-TSVYYL 192 (421)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHS-E-EEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcC-C-eEEEEC
Confidence 5688999999999999999876 33334556656655543 2 555554
No 120
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=31.34 E-value=18 Score=30.61 Aligned_cols=36 Identities=17% Similarity=0.109 Sum_probs=25.4
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 40 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~ 40 (519)
.++|..+.++||+||+++.++... ++...+...++.
T Consensus 116 ~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~ 151 (180)
T 1ej0_A 116 ELALEMCRDVLAPGGSFVVKVFQG---EGFDEYLREIRS 151 (180)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEESS---TTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEEecC---CcHHHHHHHHHH
Confidence 367889999999999999877543 333444555554
No 121
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=31.06 E-value=16 Score=34.48 Aligned_cols=22 Identities=23% Similarity=0.262 Sum_probs=19.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.+|..+..+|||||+|+.+|+.
T Consensus 149 ~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 149 TLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp HHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHCCCCCEEEEEeCC
Confidence 5788899999999999999874
No 122
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=30.71 E-value=23 Score=34.39 Aligned_cols=24 Identities=21% Similarity=0.052 Sum_probs=20.5
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.+++..+..+|+|||+++..+++.
T Consensus 173 ~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 173 EEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEET
T ss_pred HHHHHHHHHhcCCCcEEEEEcCCc
Confidence 357888999999999999988774
No 123
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=30.50 E-value=37 Score=33.49 Aligned_cols=48 Identities=25% Similarity=0.331 Sum_probs=32.4
Q ss_pred HHHHHHHhcccCCCEEEE-EcCC--CChhcCHHHHHHHHHhCCCcEEEeeC
Q 010061 3 VFVTAGISLLKVGGRIVY-STCS--MNPVENEAVVAEILRKCEGSVELVDV 50 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVY-STCS--lnp~ENEaVV~~~L~~~~~~v~lvd~ 50 (519)
+.|..|+.+||+||.|.| .++. ..+.+-...+..+.+..+-.++.+.+
T Consensus 206 ~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~~ 256 (278)
T 3k6r_A 206 EFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNE 256 (278)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEEE
Confidence 357889999999999854 4432 33344456777888877766665543
No 124
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=30.40 E-value=22 Score=32.35 Aligned_cols=24 Identities=13% Similarity=0.022 Sum_probs=19.5
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
+.|....++|||||++++.|+.+.
T Consensus 121 ~~l~~~~r~LkpgG~~~l~~~~~~ 144 (203)
T 1pjz_A 121 RYVQHLEALMPQACSGLLITLEYD 144 (203)
T ss_dssp HHHHHHHHHSCSEEEEEEEEESSC
T ss_pred HHHHHHHHHcCCCcEEEEEEEecC
Confidence 467888899999999887777664
No 125
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=29.85 E-value=18 Score=33.01 Aligned_cols=24 Identities=21% Similarity=0.350 Sum_probs=20.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.++|..+..+|||||+++.++.+.
T Consensus 117 ~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 117 KQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECH
T ss_pred HHHHHHHHHhcCCCeEEEEEcCCH
Confidence 357888999999999999987653
No 126
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=29.37 E-value=71 Score=31.86 Aligned_cols=26 Identities=12% Similarity=0.128 Sum_probs=21.7
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
.+||.+...+|||||+|+.....+..
T Consensus 287 ~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 287 VRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp HHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred HHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 47999999999999999887765544
No 127
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=29.19 E-value=45 Score=29.73 Aligned_cols=22 Identities=18% Similarity=0.158 Sum_probs=18.9
Q ss_pred HHHHHHHhcccCCCEEEEEcCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.+|..+.++||+||+++.++-.
T Consensus 111 ~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 111 AVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp HHHHHTGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEEeCC
Confidence 5788889999999999998744
No 128
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=28.70 E-value=21 Score=34.35 Aligned_cols=23 Identities=26% Similarity=0.349 Sum_probs=17.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
++|..++.+|||||++++|+.+.
T Consensus 200 ~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 200 KFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEEcCc
Confidence 46788999999999887554444
No 129
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=28.57 E-value=21 Score=30.84 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=19.4
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
++|..+..+|||||+++.++...
T Consensus 93 ~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 93 HVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHhcCCCCEEEEEEcCc
Confidence 57889999999999999986543
No 130
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=28.38 E-value=10 Score=35.19 Aligned_cols=22 Identities=27% Similarity=0.489 Sum_probs=18.7
Q ss_pred HHHHHHHhcccCCCEEEEEcCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.+|..+..+|||||++++..++
T Consensus 151 ~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 151 FIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp HHHHTHHHHEEEEEEEEECCHH
T ss_pred HHHHHHHHhcCCCeEEEEEecC
Confidence 4678889999999999987665
No 131
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=28.04 E-value=24 Score=33.37 Aligned_cols=23 Identities=13% Similarity=0.159 Sum_probs=19.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
..|..++.+|||||+||+..+..
T Consensus 151 ~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 151 NYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHEEEEEEEEEECSSS
T ss_pred HHHHHHHHhcCCCeEEEEECCcc
Confidence 56888999999999999866543
No 132
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=27.82 E-value=35 Score=34.17 Aligned_cols=35 Identities=29% Similarity=0.560 Sum_probs=27.2
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRK 40 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~ 40 (519)
+.|..|..+|+|||+|+- =||+-.|+-- |..+++.
T Consensus 214 ~~L~~a~~~L~~gGrl~v--isfHSLEDRi-VK~~~~~ 248 (285)
T 1wg8_A 214 EFLEQAAEVLAPGGRLVV--IAFHSLEDRV-VKRFLRE 248 (285)
T ss_dssp HHHHHHHHHEEEEEEEEE--EECSHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEE--EecCcHHHHH-HHHHHHh
Confidence 568889999999999853 5788888854 5667765
No 133
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=27.76 E-value=49 Score=32.66 Aligned_cols=22 Identities=18% Similarity=0.382 Sum_probs=19.4
Q ss_pred HHHHHHHHhcccCCCEEEEEcC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTC 23 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTC 23 (519)
.++|.+...+|||||+|+....
T Consensus 267 ~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 267 LTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCcEEEEEec
Confidence 4789999999999999998776
No 134
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=26.96 E-value=48 Score=31.23 Aligned_cols=23 Identities=26% Similarity=0.237 Sum_probs=19.7
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
++|..+..+|||||+++.++...
T Consensus 135 ~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 135 AAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHhcCCCcEEEEEecCC
Confidence 57888999999999999987654
No 135
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=26.44 E-value=21 Score=33.22 Aligned_cols=22 Identities=27% Similarity=0.200 Sum_probs=19.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.+|..+..+|||||+++.+|-.
T Consensus 131 ~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 131 PFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp HHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHcCCCcEEEEEeCC
Confidence 4788889999999999999854
No 136
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=26.42 E-value=21 Score=32.48 Aligned_cols=22 Identities=27% Similarity=0.326 Sum_probs=19.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTC 23 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTC 23 (519)
.++|..+..+|||||+++.++.
T Consensus 124 ~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 124 ARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCcCcEEEEEeC
Confidence 3678899999999999999874
No 137
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=26.34 E-value=36 Score=31.31 Aligned_cols=22 Identities=14% Similarity=0.221 Sum_probs=19.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS 24 (519)
++|..+..+|||||+++.++..
T Consensus 113 ~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 113 AVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp HHHHHHGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEEeCC
Confidence 5788889999999999998854
No 138
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=26.23 E-value=21 Score=32.09 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=20.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
++|..+..+|||||+++.+++..
T Consensus 123 ~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 123 QVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECH
T ss_pred HHHHHHHHHcCCCcEEEEEecCh
Confidence 67889999999999999988753
No 139
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=26.20 E-value=34 Score=32.38 Aligned_cols=22 Identities=36% Similarity=0.471 Sum_probs=18.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.++..++.+|||||+||+..+-
T Consensus 171 ~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 171 NYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp HHHHHHHHHBCTTCCEEEECTT
T ss_pred HHHHHHHHhCCCCeEEEEecCC
Confidence 5788899999999999987643
No 140
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=25.55 E-value=52 Score=32.52 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=23.9
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcC--HHHHHHHHHhCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVEN--EAVVAEILRKCE 42 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~EN--EaVV~~~L~~~~ 42 (519)
.+|..+...|||||.+|..+ +.+.+. ...+..+...+.
T Consensus 172 ~~L~~~~~~LkpGG~~v~kv--~~~~~~~~~~~l~~l~~~f~ 211 (305)
T 2p41_A 172 RVLNLVENWLSNNTQFCVKV--LNPYMSSVIEKMEALQRKHG 211 (305)
T ss_dssp HHHHHHHHHCCTTCEEEEEE--SCCCSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCEEEEEe--CCCCCchHHHHHHHHHHHcC
Confidence 56777889999999888743 444222 244455444454
No 141
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=25.49 E-value=23 Score=31.74 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=20.3
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
++|..+..+|||||+++.++....
T Consensus 113 ~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 113 RVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECTT
T ss_pred HHHHHHHHHcCCCCEEEEEecCCc
Confidence 578899999999999999986543
No 142
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=25.39 E-value=24 Score=32.04 Aligned_cols=24 Identities=21% Similarity=0.408 Sum_probs=20.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++..++.+|||||+||...+.+.
T Consensus 155 ~~l~~~~~~L~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 155 LYYEESLKLLREGGLIAVDNVLRR 178 (225)
T ss_dssp HHHHHHHHHEEEEEEEEEECSSGG
T ss_pred HHHHHHHHhcCCCcEEEEeCCCcC
Confidence 578889999999999998776643
No 143
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=25.14 E-value=33 Score=33.06 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=22.0
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
.++|..+..+|||||+++.++.+...
T Consensus 174 ~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 174 DDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 35788899999999999999887654
No 144
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=25.13 E-value=29 Score=33.50 Aligned_cols=24 Identities=25% Similarity=0.130 Sum_probs=20.3
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
++|..+..+|||||+++.++.+..
T Consensus 208 ~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 208 ELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCCC
T ss_pred HHHHHHHHhcCCCeEEEEEecCCC
Confidence 478999999999999999876543
No 145
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=25.12 E-value=1.1e+02 Score=29.68 Aligned_cols=25 Identities=12% Similarity=0.182 Sum_probs=20.8
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++|.++..+|||||+|+.....+.
T Consensus 252 ~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 252 LRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp HHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred HHHHHHHHHhcCCCCEEEEEEeccC
Confidence 3789999999999999988866543
No 146
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=25.08 E-value=24 Score=30.86 Aligned_cols=20 Identities=15% Similarity=0.298 Sum_probs=17.5
Q ss_pred HHHHHHHHhcccCCCEEEEE
Q 010061 2 VVFVTAGISLLKVGGRIVYS 21 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYS 21 (519)
.++|.++.++|||||+++.+
T Consensus 81 ~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 81 AEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp HHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEE
Confidence 36789999999999999984
No 147
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=24.65 E-value=75 Score=31.20 Aligned_cols=23 Identities=30% Similarity=0.388 Sum_probs=20.1
Q ss_pred HHHHHHHHhcccCCCEEEEEcCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.++|.+...+|||||+|+.+...
T Consensus 268 ~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 268 VRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCCcEEEEEEEe
Confidence 47899999999999999988765
No 148
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=24.55 E-value=42 Score=34.54 Aligned_cols=74 Identities=20% Similarity=0.375 Sum_probs=41.1
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEeeCCCCCCcccCCCCc-----ccceecCCCccccc
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIHRPGL-----RKWKVRDKGIWLAS 77 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd~~~~lp~l~~~pGl-----~~W~v~~~~~~~~~ 77 (519)
+.|..|..+|+|||+|+- =||+-.|+- +|..+++..... ..++..+|-. ..|. ..|++..+ ...+
T Consensus 255 ~~L~~a~~~L~~gGRl~V--ISFHSLEDR-iVK~~f~~~~~~---~~~p~~~p~~--~~~~~~~~~~~~~~i~k--i~ps 324 (347)
T 3tka_A 255 QALKSSLNVLAPGGRLSI--ISFHSLEDR-IVKRFMRENSRG---PQVPAGLPMT--EEQLKKLGGRQLRALGK--LMPG 324 (347)
T ss_dssp HHHHHHHHHEEEEEEEEE--EESSHHHHH-HHHHHHHHTTCC------------------------CCEEEEEE--ECCC
T ss_pred HHHHHHHHHhCCCCEEEE--EecCchhHH-HHHHHHHHhccC---CCCCccCCcc--ccccccccCcceeeecC--cCcC
Confidence 468889999999999875 578888986 556667654211 1123333321 1111 24665554 5567
Q ss_pred hhhhhhhhh
Q 010061 78 HKHVRKFRR 86 (519)
Q Consensus 78 ~~~v~~~~~ 86 (519)
-+++..+-|
T Consensus 325 ~~Ei~~NpR 333 (347)
T 3tka_A 325 EEEVAENPR 333 (347)
T ss_dssp HHHHHHCGG
T ss_pred HHHHHhCcc
Confidence 777766544
No 149
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=24.35 E-value=53 Score=29.22 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=26.5
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcE
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSV 45 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v 45 (519)
.++|.+++.++ | .+|+.|. .+.++.+.+..++...+..+
T Consensus 131 ~~~l~~~~~~l--~--~~~~~~~-~~~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 131 RPFLLKAFEIS--D--VVYSIHL-AKPEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp HHHHHHHHHHC--S--EEEEEEE-CCHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHhc--C--cEEEEEe-CCcCCHHHHHHHHHHCCCeE
Confidence 35778888887 3 3788883 34466777777888776333
No 150
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=24.11 E-value=36 Score=33.85 Aligned_cols=35 Identities=17% Similarity=0.049 Sum_probs=24.5
Q ss_pred HHHHHHHHhcccCCCEEEEEcCC--CChhcCHHHHHH
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCS--MNPVENEAVVAE 36 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCS--lnp~ENEaVV~~ 36 (519)
.+++..+.++|||||+++..++| +.+..-..+++.
T Consensus 210 ~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 246 (321)
T 2pt6_A 210 QNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGY 246 (321)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHH
Confidence 36788999999999999997655 344433444444
No 151
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=24.06 E-value=37 Score=32.83 Aligned_cols=22 Identities=27% Similarity=0.146 Sum_probs=19.4
Q ss_pred HHHHHHHhcccCCCEEEEEcCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCS 24 (519)
+++..+.++|||||++|..+.+
T Consensus 170 ~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 170 GFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp HHHHHHHHHEEEEEEEEEECCC
T ss_pred HHHHHHHHhcCCCcEEEEEcCC
Confidence 5788899999999999998766
No 152
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=23.88 E-value=27 Score=30.42 Aligned_cols=18 Identities=22% Similarity=0.032 Sum_probs=15.7
Q ss_pred hcccCCCEEEEEcCCCCh
Q 010061 10 SLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 10 ~lLk~GG~lVYSTCSlnp 27 (519)
.+||+||+++.++++-..
T Consensus 126 ~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 126 NLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp TCEEEEEEEEEEEETTCC
T ss_pred CCcCCCcEEEEEECCccc
Confidence 899999999999987654
No 153
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=23.81 E-value=31 Score=33.17 Aligned_cols=26 Identities=15% Similarity=0.114 Sum_probs=20.3
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPV 28 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ 28 (519)
+.+..+...|||||+|+..+.+....
T Consensus 116 ~~~~e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 116 RFWAELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECCCBC
T ss_pred HHHHHHHHHcCCCCEEEEEECCCCCC
Confidence 45777888999999998888766543
No 154
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=23.73 E-value=28 Score=34.59 Aligned_cols=26 Identities=15% Similarity=0.365 Sum_probs=23.4
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPV 28 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ 28 (519)
++|..+..+|||||+++..+++..+.
T Consensus 284 ~~l~~~~~~LkpgG~l~i~~~~~~~~ 309 (343)
T 2pjd_A 284 TLIRGAVRHLNSGGELRIVANAFLPY 309 (343)
T ss_dssp HHHHHHGGGEEEEEEEEEEEETTSSH
T ss_pred HHHHHHHHhCCCCcEEEEEEcCCCCc
Confidence 67889999999999999999988874
No 155
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=23.29 E-value=17 Score=36.36 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=28.0
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC--hhcCHHHHHHHH
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN--PVENEAVVAEIL 38 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln--p~ENEaVV~~~L 38 (519)
+..+..+..+|||||+++.++|++. |++.+..-...+
T Consensus 135 ~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~~~~~~ 173 (348)
T 2y1w_A 135 LESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQF 173 (348)
T ss_dssp HHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHhhcCCCeEEEEecCcEEEEEecchHHhhhhc
Confidence 4677788899999999998888764 677776544433
No 156
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=22.83 E-value=31 Score=30.72 Aligned_cols=24 Identities=21% Similarity=0.029 Sum_probs=20.0
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
++|..+..+|||||+++.......
T Consensus 146 ~~l~~~~~~L~~gG~l~~~~~~~~ 169 (207)
T 1jsx_A 146 DMVSWCHHLPGEQGRFYALKGQMP 169 (207)
T ss_dssp HHHHHHTTSEEEEEEEEEEESSCC
T ss_pred HHHHHHHHhcCCCcEEEEEeCCCc
Confidence 578889999999999999866543
No 157
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=22.59 E-value=45 Score=34.46 Aligned_cols=44 Identities=20% Similarity=0.247 Sum_probs=29.7
Q ss_pred HHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEE
Q 010061 4 FVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVEL 47 (519)
Q Consensus 4 IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~l 47 (519)
++..+.++|+|||+||--+||.+.-|--......|++.-..+..
T Consensus 296 ~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 296 ILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp HHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred HHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEE
Confidence 34556899999999999999988744444555545544334554
No 158
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=22.32 E-value=27 Score=33.40 Aligned_cols=23 Identities=17% Similarity=0.132 Sum_probs=18.6
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
+++.+...+|||||+++..|..+
T Consensus 172 ~~l~~~~~~LkpGG~l~l~~~~~ 194 (252)
T 2gb4_A 172 RYADIILSLLRKEFQYLVAVLSY 194 (252)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCeEEEEEEEec
Confidence 46788899999999998776554
No 159
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=22.26 E-value=42 Score=32.36 Aligned_cols=24 Identities=17% Similarity=0.002 Sum_probs=20.9
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.++|.+....|||||+|+.++...
T Consensus 176 ~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 176 DRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred HHHHHHHHHhCCCCcEEEEEEecC
Confidence 368899999999999999998765
No 160
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=22.19 E-value=63 Score=31.20 Aligned_cols=25 Identities=16% Similarity=0.137 Sum_probs=20.6
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++|.++..+|||||+|+.......
T Consensus 251 ~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 251 EQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHhCCCCcEEEEEeecCC
Confidence 4789999999999998888766554
No 161
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=22.10 E-value=32 Score=31.28 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=19.7
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.++..++.+|||||+||...+..
T Consensus 160 ~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 160 AYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp HHHHHHHHHEEEEEEEEEECCSG
T ss_pred HHHHHHHHHcCCCeEEEEECCCc
Confidence 57888999999999999987654
No 162
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=21.85 E-value=43 Score=32.43 Aligned_cols=23 Identities=26% Similarity=0.148 Sum_probs=20.1
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
+++..+.++|||||++|..++|.
T Consensus 173 ~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 173 NFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCT
T ss_pred HHHHHHHHhcCCCcEEEEECCCc
Confidence 67888999999999999988763
No 163
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=21.71 E-value=31 Score=33.17 Aligned_cols=21 Identities=24% Similarity=0.243 Sum_probs=18.3
Q ss_pred HHHHHHHhcccCCCEEEEEcC
Q 010061 3 VFVTAGISLLKVGGRIVYSTC 23 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTC 23 (519)
++|.+....|||||++|.+.-
T Consensus 159 ~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 159 ALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEec
Confidence 578999999999999998753
No 164
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=21.65 E-value=24 Score=33.23 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=20.5
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
++|..+..+|||||+++.++++..
T Consensus 184 ~~l~~~~~~L~pgG~l~~~~~~~~ 207 (280)
T 1i9g_A 184 EVLDAVSRLLVAGGVLMVYVATVT 207 (280)
T ss_dssp GGHHHHHHHEEEEEEEEEEESSHH
T ss_pred HHHHHHHHhCCCCCEEEEEeCCHH
Confidence 468889999999999999888653
No 165
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=21.58 E-value=33 Score=35.14 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=23.1
Q ss_pred HHHHHHHhcccCCCEEEEEcCCCChh
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSMNPV 28 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSlnp~ 28 (519)
+++..+..+|||||+++.++++..+.
T Consensus 321 ~~l~~~~~~LkpGG~l~iv~n~~l~~ 346 (381)
T 3dmg_A 321 AFVNVAAARLRPGGVFFLVSNPFLKY 346 (381)
T ss_dssp HHHHHHHHHEEEEEEEEEEECTTSCH
T ss_pred HHHHHHHHhcCcCcEEEEEEcCCCCh
Confidence 57889999999999999999988764
No 166
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=21.35 E-value=49 Score=30.35 Aligned_cols=25 Identities=12% Similarity=-0.004 Sum_probs=20.7
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMN 26 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSln 26 (519)
.++|.....+|||||+|+.+..+..
T Consensus 143 ~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 143 ELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 3678889999999999888877654
No 167
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=21.28 E-value=1e+02 Score=29.90 Aligned_cols=42 Identities=7% Similarity=0.024 Sum_probs=32.1
Q ss_pred CHHHHHHHHhcccCCCEEEEEcCCCChhcCHHHHHHHHHhCCCcEEEee
Q 010061 1 MVVFVTAGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVD 49 (519)
Q Consensus 1 ~~~IL~ra~~lLk~GG~lVYSTCSlnp~ENEaVV~~~L~~~~~~v~lvd 49 (519)
+.+||..+...|+++|++|-|.- -+...|...|...+ |.+++
T Consensus 104 I~~IL~~~~~~L~~~~~lIlq~~-----~~~~~lr~~L~~~G--f~i~~ 145 (244)
T 3gnl_A 104 IRTILEEGAAKLAGVTKLILQPN-----IAAWQLREWSEQNN--WLITS 145 (244)
T ss_dssp HHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHHT--EEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEcC-----CChHHHHHHHHHCC--CEEEE
Confidence 46899999999999999998863 36677777777765 55543
No 168
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=20.77 E-value=30 Score=33.39 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=19.5
Q ss_pred HHHHHHHHhcccCCCEEEEEcCC
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCS 24 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCS 24 (519)
.++|.++..+|||||+||..+..
T Consensus 200 ~~~l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 200 KRMFRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHHHHHHHEEEEEEEEEECCC
T ss_pred HHHHHHHHHHhCCCcEEEEecCC
Confidence 36889999999999999997653
No 169
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=20.53 E-value=35 Score=29.88 Aligned_cols=20 Identities=15% Similarity=0.036 Sum_probs=16.6
Q ss_pred HHHHHHHHhcccCCCEEEEE
Q 010061 2 VVFVTAGISLLKVGGRIVYS 21 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYS 21 (519)
.++|..+..+|||||+++..
T Consensus 116 ~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 116 PGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp HHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEE
Confidence 35788899999999997764
No 170
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=20.30 E-value=33 Score=31.40 Aligned_cols=23 Identities=9% Similarity=0.046 Sum_probs=19.5
Q ss_pred HHHHHHHhcccCCCEEEEEcCCC
Q 010061 3 VFVTAGISLLKVGGRIVYSTCSM 25 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYSTCSl 25 (519)
.+|..+.++||+||+++..+.+.
T Consensus 171 ~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 171 HYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp GGHHHHHHHBCTTCEEEEEESSH
T ss_pred HHHHHHHHHcCCCCEEEEEeCCH
Confidence 46788899999999999988665
No 171
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=20.07 E-value=36 Score=31.75 Aligned_cols=20 Identities=15% Similarity=0.132 Sum_probs=16.9
Q ss_pred HHHHHHHhcccCCCEEEEEc
Q 010061 3 VFVTAGISLLKVGGRIVYST 22 (519)
Q Consensus 3 ~IL~ra~~lLk~GG~lVYST 22 (519)
.+|.....+|||||+++.++
T Consensus 120 ~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 120 DILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp HHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEE
Confidence 46788899999999999844
No 172
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=20.05 E-value=64 Score=32.29 Aligned_cols=26 Identities=12% Similarity=0.291 Sum_probs=21.6
Q ss_pred HHHHHHHHhcccCCCEEEEEcCCCCh
Q 010061 2 VVFVTAGISLLKVGGRIVYSTCSMNP 27 (519)
Q Consensus 2 ~~IL~ra~~lLk~GG~lVYSTCSlnp 27 (519)
.+||.++.++|||||+|+.....+..
T Consensus 280 ~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 280 LKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp HHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred HHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 47899999999999999887766543
Done!