Query 010062
Match_columns 519
No_of_seqs 426 out of 2404
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 19:03:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010062.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010062hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 8.3E-27 2.8E-31 263.2 34.7 216 79-311 135-377 (802)
2 3bcv_A Putative glycosyltransf 99.9 9E-26 3.1E-30 217.7 17.8 204 83-301 4-226 (240)
3 1qg8_A Protein (spore coat pol 99.9 9.6E-26 3.3E-30 219.7 13.5 200 84-301 1-215 (255)
4 1xhb_A Polypeptide N-acetylgal 99.9 7.2E-24 2.5E-28 225.8 17.3 212 81-302 26-260 (472)
5 2d7i_A Polypeptide N-acetylgal 99.9 3.5E-23 1.2E-27 225.5 17.9 209 81-300 109-338 (570)
6 2z86_A Chondroitin synthase; G 99.9 2.3E-22 7.8E-27 221.6 20.7 211 81-302 90-332 (625)
7 3ckj_A Putative uncharacterize 99.9 4.8E-23 1.6E-27 209.4 13.6 204 82-300 46-264 (329)
8 4fix_A UDP-galactofuranosyl tr 99.9 1.6E-22 5.5E-27 222.6 18.1 235 80-327 176-447 (657)
9 2z86_A Chondroitin synthase; G 99.9 2.8E-22 9.4E-27 220.9 18.8 199 82-300 373-572 (625)
10 2ffu_A Ppgalnact-2, polypeptid 99.9 1.6E-22 5.6E-27 217.1 16.0 206 80-300 62-290 (501)
11 3f1y_A Mannosyl-3-phosphoglyce 99.9 6.4E-22 2.2E-26 204.8 11.2 198 83-299 93-308 (387)
12 3l7i_A Teichoic acid biosynthe 99.8 4.4E-22 1.5E-26 223.1 0.0 202 83-300 1-206 (729)
13 2nxv_A ATP synthase subunits r 99.8 8E-18 2.7E-22 164.0 17.4 180 82-299 14-203 (249)
14 2fy7_A Beta-1,4-galactosyltran 99.7 7.2E-17 2.5E-21 160.2 8.3 150 82-292 63-220 (287)
15 2bo4_A Mannosylglycerate synth 99.6 1.7E-15 5.9E-20 156.5 12.1 192 88-293 4-210 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 99.2 3.1E-11 1E-15 119.7 12.0 121 84-211 53-202 (391)
17 2zu9_A Mannosyl-3-phosphoglyce 99.2 6.7E-11 2.3E-15 120.5 12.8 108 85-199 52-185 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.9 2.8E-09 9.5E-14 107.7 9.2 202 84-311 2-223 (343)
19 3lw6_A FI08434P, beta-4-galact 97.7 0.00012 4.1E-09 70.6 9.5 152 84-294 51-206 (287)
20 2c0n_A A197; thermophil protei 97.2 0.0012 4.2E-08 60.0 9.0 105 173-289 53-165 (203)
21 1omz_A Alpha-1,4-N-acetylhexos 94.5 0.12 4E-06 50.4 8.9 116 84-211 28-143 (293)
22 4fcu_A 3-deoxy-manno-octuloson 94.5 0.57 1.9E-05 44.7 13.8 100 94-208 24-126 (253)
23 3tqd_A 3-deoxy-manno-octuloson 94.4 0.91 3.1E-05 43.3 14.9 97 97-208 35-133 (256)
24 1qwj_A Cytidine monophospho-N- 93.2 2.5 8.4E-05 39.2 15.4 94 94-200 26-122 (229)
25 3k8d_A 3-deoxy-manno-octuloson 92.3 0.85 2.9E-05 43.7 10.9 95 97-207 44-140 (264)
26 3oam_A 3-deoxy-manno-octuloson 92.2 1.5 5.1E-05 41.4 12.5 92 94-200 25-118 (252)
27 1v84_A Galactosylgalactosylxyl 90.5 2.7 9.2E-05 39.8 11.9 103 83-194 2-127 (253)
28 1h7e_A 3-deoxy-manno-octuloson 90.1 4.5 0.00015 37.5 13.5 92 94-201 25-117 (245)
29 3f1c_A Putative 2-C-methyl-D-e 89.4 4.6 0.00016 37.8 13.0 98 94-201 30-133 (246)
30 1ezi_A CMP-N-acetylneuraminic 88.6 3.5 0.00012 37.9 11.3 95 94-200 27-124 (228)
31 3cu0_A Galactosylgalactosylxyl 87.6 7.9 0.00027 37.0 12.9 105 81-194 18-153 (281)
32 3q80_A 2-C-methyl-D-erythritol 87.1 9.3 0.00032 35.5 13.3 102 94-211 33-137 (231)
33 2d0j_A Galactosylgalactosylxyl 86.8 5.3 0.00018 37.6 11.1 105 83-194 2-121 (246)
34 2wee_A MOBA-related protein; u 86.2 6.4 0.00022 34.9 11.4 93 94-200 29-122 (197)
35 1vic_A 3-deoxy-manno-octuloson 85.7 6.9 0.00024 36.8 11.8 95 90-200 22-118 (262)
36 2y6p_A 3-deoxy-manno-octuloson 85.7 7 0.00024 35.8 11.6 94 90-203 22-116 (234)
37 2yc3_A 2-C-methyl-D-erythritol 85.5 2.7 9.2E-05 38.6 8.6 98 90-200 27-125 (228)
38 3ngw_A Molybdopterin-guanine d 85.4 4.3 0.00015 37.1 9.8 86 94-200 24-110 (208)
39 3st8_A Bifunctional protein GL 85.0 5.9 0.0002 41.4 11.9 106 84-200 31-138 (501)
40 2waw_A MOBA relate protein; un 82.9 4.1 0.00014 36.2 8.4 93 94-200 29-122 (199)
41 1vgw_A 4-diphosphocytidyl-2C-m 79.1 16 0.00055 33.2 11.3 95 94-201 32-132 (231)
42 2vsh_A TARI, 2-C-methyl-D-eryt 76.9 19 0.00063 32.8 11.1 100 90-200 26-133 (236)
43 3d5n_A Q97W15_sulso; NESG, SSR 75.4 2.6 8.9E-05 38.0 4.5 86 94-198 26-112 (197)
44 1hm9_A GLMU, UDP-N-acetylgluco 75.0 7.3 0.00025 40.0 8.4 96 89-200 33-129 (468)
45 2xwl_A 2-C-methyl-D-erythritol 74.8 40 0.0014 30.2 12.7 92 94-200 28-121 (223)
46 1vpa_A 2-C-methyl-D-erythritol 73.2 26 0.00088 31.9 11.0 94 94-200 39-134 (234)
47 1i52_A 4-diphosphocytidyl-2-C- 73.1 16 0.00053 33.6 9.4 93 94-200 33-126 (236)
48 3juk_A UDP-glucose pyrophospho 73.0 9.4 0.00032 36.2 8.1 98 89-200 27-151 (281)
49 2qh5_A PMI, ALGA, mannose-6-ph 71.2 55 0.0019 31.3 13.4 97 89-197 30-128 (308)
50 3pnn_A Conserved domain protei 70.1 37 0.0013 32.6 11.7 104 89-200 25-141 (303)
51 4fce_A Bifunctional protein GL 70.0 12 0.00043 38.0 8.7 100 90-206 31-131 (459)
52 1e5k_A Molybdopterin-guanine d 69.5 18 0.00063 32.4 8.8 85 94-197 31-116 (201)
53 4ecm_A Glucose-1-phosphate thy 69.3 17 0.00059 34.2 9.0 94 94-200 53-148 (269)
54 2ux8_A Glucose-1-phosphate uri 69.0 14 0.00049 35.3 8.4 99 89-200 39-160 (297)
55 3tzt_A Glycosyl transferase fa 68.7 38 0.0013 32.2 11.3 120 85-208 5-134 (276)
56 2v0h_A Bifunctional protein GL 65.6 31 0.0011 35.0 10.6 95 90-200 28-123 (456)
57 3rsb_A Adenosylcobinamide-phos 65.5 7.4 0.00025 34.6 5.2 94 94-200 25-119 (196)
58 1lvw_A Glucose-1-phosphate thy 64.7 29 0.001 33.3 9.7 111 89-213 28-141 (295)
59 1fxo_A Glucose-1-phosphate thy 61.8 39 0.0013 32.3 9.9 97 89-199 27-126 (293)
60 2j0a_A Beta-1,3-N-acetylglucos 60.3 14 0.00048 35.4 6.4 109 173-293 93-210 (280)
61 1mc3_A Glucose-1-phosphate thy 58.3 42 0.0014 32.1 9.5 115 89-215 28-143 (296)
62 2xme_A CTP-inositol-1-phosphat 57.6 18 0.00063 33.0 6.5 87 95-196 44-130 (232)
63 1g9r_A Glycosyl transferase; a 57.3 18 0.00063 35.0 6.8 108 95-208 11-129 (311)
64 2e8b_A Probable molybdopterin- 55.3 44 0.0015 29.7 8.6 78 97-195 41-120 (201)
65 2e3d_A UTP--glucose-1-phosphat 54.3 43 0.0015 31.9 8.9 99 90-200 34-161 (302)
66 1w55_A ISPD/ISPF bifunctional 53.9 65 0.0022 32.1 10.3 87 94-200 29-116 (371)
67 2pa4_A UTP-glucose-1-phosphate 53.8 27 0.00094 33.8 7.4 104 90-200 38-160 (323)
68 1yp2_A Glucose-1-phosphate ade 53.1 1E+02 0.0034 31.1 11.9 105 89-200 45-161 (451)
69 2px7_A 2-C-methyl-D-erythritol 46.7 1.3E+02 0.0044 27.3 10.6 83 94-200 50-133 (236)
70 3da8_A Probable 5'-phosphoribo 42.2 1.8E+02 0.0063 26.4 10.5 94 86-192 13-108 (215)
71 3brk_X Glucose-1-phosphate ade 41.1 58 0.002 32.7 7.7 105 89-200 37-151 (420)
72 2dpw_A Hypothetical protein TT 39.9 92 0.0031 28.2 8.3 79 94-199 30-109 (232)
73 2gak_A Beta-1,6-N-acetylglucos 36.7 2.2E+02 0.0074 28.4 11.1 108 84-197 84-198 (391)
74 4evw_A Nucleoside-diphosphate- 35.9 91 0.0031 28.9 7.7 97 90-193 25-125 (255)
75 3kcq_A Phosphoribosylglycinami 32.2 2.9E+02 0.0098 25.0 10.9 95 85-193 8-102 (215)
76 2x65_A Mannose-1-phosphate gua 31.1 1.5E+02 0.0051 28.8 8.6 96 89-196 27-123 (336)
77 2i5e_A Hypothetical protein MM 29.6 2.8E+02 0.0094 24.4 9.6 45 144-196 66-111 (211)
78 2ywr_A Phosphoribosylglycinami 27.9 3.3E+02 0.011 24.4 10.5 93 88-191 4-98 (216)
79 1tzf_A Glucose-1-phosphate cyt 27.3 1.4E+02 0.0047 27.2 7.3 41 158-200 107-147 (259)
80 4ds3_A Phosphoribosylglycinami 24.1 3.9E+02 0.013 24.0 11.4 41 85-127 7-47 (209)
81 3av3_A Phosphoribosylglycinami 23.3 4E+02 0.014 23.8 11.7 93 88-191 6-100 (212)
82 2ggo_A 401AA long hypothetical 22.4 1.3E+02 0.0043 29.7 6.4 86 90-196 26-113 (401)
83 3hvm_A Agmatine deiminase; hyd 20.6 1E+02 0.0034 30.2 4.9 31 87-121 281-311 (330)
84 4grd_A N5-CAIR mutase, phospho 20.5 2.5E+02 0.0084 24.7 6.8 62 82-149 11-72 (173)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.96 E-value=8.3e-27 Score=263.24 Aligned_cols=216 Identities=13% Similarity=0.151 Sum_probs=160.2
Q ss_pred CCCCCCcEEEEeeccCCchHH-HHHHHHHHhccCCCC-eEEEEEECCCCCcHH---------------HHHHHHHhhcCC
Q 010062 79 NQIKLPRVTVVMPLKGFGEHN-LLNWRSQVTSLYGGP-LEFLFVVESKEDPAY---------------HSVLRLLQEFKD 141 (519)
Q Consensus 79 ~~~~~P~VSVIIP~~ne~~~L-~~~L~Sl~~q~yp~~-~eiIvV~d~s~D~t~---------------~i~~~l~~~~~~ 141 (519)
++++.|+|||+||+|||++.+ ++||+|+++|+||.+ +||++|||+|+|+|. +.++++.+++
T Consensus 135 ~~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~-- 212 (802)
T 4hg6_A 135 QPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL-- 212 (802)
T ss_dssp CTTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhc--
Confidence 345678999999999999876 999999999999943 999999999999983 2344444443
Q ss_pred CCceEEEEcCCCCCcchhHHHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCCChhh
Q 010062 142 DVDAKVVVAGLSTTCSQKIHNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLGS 221 (519)
Q Consensus 142 ~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~~ 221 (519)
+++++..++ +.++|.+|+|.|++++ ++|||+++|+|+.++||+|+++++.|++||++++|++.......+....
T Consensus 213 --~v~~i~~~~--~~~GKa~alN~gl~~a--~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~ 286 (802)
T 4hg6_A 213 --GVVYSTRER--NEHAKAGNMSAALERL--KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQR 286 (802)
T ss_dssp --TCEEEECSS--CCSHHHHHHHHHHHHC--CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHH
T ss_pred --CcEEEEecC--CCCcchHHHHHHHHhc--CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhh
Confidence 467766544 3468999999999999 7999999999999999999999999987899999998443332221111
Q ss_pred HH----------HHhhccccccccccCCCcccccccchhccHhhhccccccCcccCCCCCcccHHHHHHHHHhCCCcEEe
Q 010062 222 YC----------IYEYHMPCSMGFATGGKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLAALAGAHNRLITS 291 (519)
Q Consensus 222 ~~----------~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~~~~~~~g~~v~~ 291 (519)
.. ...+.. ...+....+. .++.|+++++||+++ +++||+++. .++||.+++.++.+.|+++.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~G~~~~~Rr~al--~~vGgf~~~---~~~ED~~l~~rl~~~G~ri~~ 359 (802)
T 4hg6_A 287 NLALGDRCPPENEMFYGK-IHRGLDRWGG-AFFCGSAAVLRRRAL--DEAGGFAGE---TITEDAETALEIHSRGWKSLY 359 (802)
T ss_dssp HHTCCTTSCCTTHHHHHT-HHHHHHHTTC-CCCCSSSEEEEHHHH--HHHTTCCCS---SSSHHHHHHHHHHTTTCCEEE
T ss_pred hhhHHhhhhHHHHHHHHH-HHhhHhhcCC-ceecccchhhhHHHH--HHcCCcCCC---CcchHHHHHHHHHHcCCeEEE
Confidence 10 000000 0011111112 256799999999999 779999863 678999999888888888888
Q ss_pred cCceeeeccCCCCCCHHHHH
Q 010062 292 PPVAVFPHPLASDLSFGRYW 311 (519)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~ 311 (519)
.+.+.+.+.. +.++++++
T Consensus 360 ~~~~~~~~~~--p~t~~~~~ 377 (802)
T 4hg6_A 360 IDRAMIAGLQ--PETFASFI 377 (802)
T ss_dssp CCCCCEEECC--CCSHHHHH
T ss_pred ecCCEEEecC--CCCHHHHH
Confidence 8877776644 45776665
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.94 E-value=9e-26 Score=217.75 Aligned_cols=204 Identities=11% Similarity=0.072 Sum_probs=143.1
Q ss_pred CCcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHH
Q 010062 83 LPRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHN 162 (519)
Q Consensus 83 ~P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~n 162 (519)
.|+||||||+||+++.|.+||+|+++|+|+ ++|+|+|||+|+|+|.++++++.++++ +++++.. ++ .|+..+
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~-~~eiIvvDd~S~d~t~~~~~~~~~~~~---~i~~i~~-~n---~G~~~a 75 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALLAQTLS-DIEIILIDDESPDNCPKICDDYAAQYP---NIKVIHK-KN---AGLGMA 75 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHHTCSSS-SEEEEEEECCCSSSHHHHHHHHHHHCS---SEEEEEC-CC---CCHHHH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHhCcCC-CeEEEEEECCCCcCHHHHHHHHHhhCC---CEEEEEC-CC---CChHHH
Confidence 578999999999999999999999999999 899999999999999999999998887 6888863 33 357888
Q ss_pred HHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccc-cCCCC----ChhhH---------H-HHhh
Q 010062 163 QLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPL-DLPSG----SLGSY---------C-IYEY 227 (519)
Q Consensus 163 l~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~-~~~~~----~~~~~---------~-~~~~ 227 (519)
.|.|+++| +||||+|+|+|+.++|++|+++++.+++ ++.+++.+... ..+++ .+... . ...+
T Consensus 76 ~N~g~~~a--~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (240)
T 3bcv_A 76 CNSGLDVA--TGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTL 152 (240)
T ss_dssp HHHHHHHC--CSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEEECSHHHHHHH
T ss_pred HHHHHHHc--CCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHH
Confidence 99999999 7999999999999999999999999986 45666654221 11121 11100 0 0000
Q ss_pred cccccccccc---CCCcccccccchhccHhhhcccccc-CcccCCCCCcccHHHHHHHHHhCCCcEEecCceeeeccC
Q 010062 228 HMPCSMGFAT---GGKTFFLWGGCMMMHADDFRLDRYG-VVSGLRDGGYSDDMTLAALAGAHNRLITSPPVAVFPHPL 301 (519)
Q Consensus 228 ~~~~~~~~~~---~~~~~~~~G~~~~~Rr~~~~~~~~G-g~~~~~~g~~~ED~~l~~~~~~~g~~v~~~~~~~~~~~~ 301 (519)
.. ...+... ........|+++++||+++ +++| +|++-.. ...||++++.++.+.|+++.+.|..+++++.
T Consensus 153 ~~-~~~~~~~~~~~~~~~~~~~~~~~~rr~~~--~~~g~~f~~~~~-~~~eD~~~~~r~~~~g~~i~~~~~~~~~yr~ 226 (240)
T 3bcv_A 153 LK-DLIASDPYAREERAIQVSAKVVLYRRNLI--EKKHLRFVSERI-LPSEDLIFNVDVLANSNIVCVLPQTFYNYRT 226 (240)
T ss_dssp HG-GGTSSCHHHHHHHHHHHTCSCEEEEHHHH--HHTTCCCCCTTT-CTTHHHHHHHHHHTTCSCEEECC--------
T ss_pred HH-HHhhcchhhccccccccchhheeeeHHHH--HHcCCccCCCCC-ccCCCHHHHHHHHHhCCEEEEECCCeEEEEe
Confidence 00 0000000 0000123478899999999 7788 7876422 3569999998888888888888888776654
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.93 E-value=9.6e-26 Score=219.74 Aligned_cols=200 Identities=10% Similarity=0.065 Sum_probs=148.9
Q ss_pred CcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCC-----Ccch
Q 010062 84 PRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLST-----TCSQ 158 (519)
Q Consensus 84 P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~-----~~~~ 158 (519)
|+||||||+||+++.|.+||+|+++|+|| ++|+|||||+|+|+|.++++++.. .+ +++++..+... ...|
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~-~~eiivvDd~S~d~t~~~~~~~~~-~~---~i~~i~~~~~~~~~~~~n~G 75 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFS-DFELFIMDDNSNEETLNVIRPFLN-DN---RVRFYQSDISGVKERTEKTR 75 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCC-CEEEEEEECSCCHHHHHHHGGGGG-ST---TEEEEECCCCSHHHHHSSCH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCC-ceEEEEEECCCCchHHHHHHHHhh-cC---CEEEEecccccccccccccC
Confidence 68999999999999999999999999999 899999999999999999888765 33 78998876221 2346
Q ss_pred hHHHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccC--C-CCChhhHHHHhhcccccccc
Q 010062 159 KIHNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDL--P-SGSLGSYCIYEYHMPCSMGF 235 (519)
Q Consensus 159 K~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~--~-~~~~~~~~~~~~~~~~~~~~ 235 (519)
+..+.|.|++.| +||||+|+|+|+.++|++|+++++.++++|++++|++..... . .+..... ...... ..
T Consensus 76 ~~~a~N~gi~~a--~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~--~~ 148 (255)
T 1qg8_A 76 YAALINQAIEMA--EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKE---TVRPAA--QV 148 (255)
T ss_dssp HHHHHHHHHHHC--CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEE---EEECCC--SC
T ss_pred HHHHHHHHHHHc--CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhh---ccCchH--HH
Confidence 888999999999 799999999999999999999999999889999999844322 2 1111000 000000 00
Q ss_pred ccCCCcccccccchhccHhhhcccccc-Cc------ccCCCCCcccHHHHHHHHHhCCCcEEecCceeeeccC
Q 010062 236 ATGGKTFFLWGGCMMMHADDFRLDRYG-VV------SGLRDGGYSDDMTLAALAGAHNRLITSPPVAVFPHPL 301 (519)
Q Consensus 236 ~~~~~~~~~~G~~~~~Rr~~~~~~~~G-g~------~~~~~g~~~ED~~l~~~~~~~g~~v~~~~~~~~~~~~ 301 (519)
.. .......|+++++||+++ +++| +| +.. ....||+++..++.+.|. +...+...+.+..
T Consensus 149 ~~-~~~~~~~~~~~~~rr~~~--~~~g~~f~~~~~~~~~--~~~~eD~~~~~r~~~~g~-~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 149 TW-NAPCAIDHCSVMHRYSVL--EKVKEKFGSYWDESPA--FYRIGDARFFWRVNHFYP-FYPLDEELDLNYI 215 (255)
T ss_dssp BS-CCTTTSCGGGEEEETHHH--HHHHHHHSSSSCCCGG--GSTTHHHHHHHHHTTTCC-BEEEEEEEEEEEE
T ss_pred HH-hhcCCCccceEEEEHHHH--HhhcccccccccCCcc--cchHHHHHHHHHHHHhCC-EEEecCcEEEEEE
Confidence 00 112356789999999999 7788 67 332 246799999977777775 5544555555443
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.91 E-value=7.2e-24 Score=225.81 Aligned_cols=212 Identities=13% Similarity=0.138 Sum_probs=155.9
Q ss_pred CCCCcEEEEeeccCCc-hHHHHHHHHHHhccCCCC-eEEEEEECCCCCc-HHHHHHHHHhhcCCCCceEEEEcCCCCCcc
Q 010062 81 IKLPRVTVVMPLKGFG-EHNLLNWRSQVTSLYGGP-LEFLFVVESKEDP-AYHSVLRLLQEFKDDVDAKVVVAGLSTTCS 157 (519)
Q Consensus 81 ~~~P~VSVIIP~~ne~-~~L~~~L~Sl~~q~yp~~-~eiIvV~d~s~D~-t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~ 157 (519)
..+|+||||||+|||+ +.|.+||+|+++|+||.. +|||||||+|+|+ +.++++++.+++|. +++++..+.+.
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~--~v~vi~~~~n~--- 100 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKV--PVHVIRMEQRS--- 100 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSS--CEEEEECSSCC---
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCC--cEEEEECCCCC---
Confidence 4579999999999999 999999999999999832 7999999999995 99999999888874 58999887655
Q ss_pred hhHHHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCCChh-----h--HHHHhhccc
Q 010062 158 QKIHNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLG-----S--YCIYEYHMP 230 (519)
Q Consensus 158 ~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~-----~--~~~~~~~~~ 230 (519)
|+..+.|.|+++| +||||+|+|+|+.++|+||+.+++.+++++.++++...... ..+++. . .....+...
T Consensus 101 G~~~a~N~g~~~A--~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 177 (472)
T 1xhb_A 101 GLIRARLKGAAVS--RGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVI-SDDTFEYMAGSDMTYGGFNWKLN 177 (472)
T ss_dssp CHHHHHHHHHHHC--CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEE-CSSSCCEECCCTTEEEEECTTCC
T ss_pred ChHHHHHHHHHhc--cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeE-cCCCceeccCCCcccceeeccce
Confidence 4788899999999 79999999999999999999999999987877655432111 111110 0 000000000
Q ss_pred --c-cc----------ccccCCCcccccccchhccHhhhccccccCcccCCCCCcccHHHHHHHHHhCCCcEEecCceee
Q 010062 231 --C-SM----------GFATGGKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLAALAGAHNRLITSPPVAVF 297 (519)
Q Consensus 231 --~-~~----------~~~~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~~~~~~~g~~v~~~~~~~~ 297 (519)
. .. ............|+++++||++| +++|+|++-......||.|++.++.+.|.++...|.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~--~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v 255 (472)
T 1xhb_A 178 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYF--QEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHV 255 (472)
T ss_dssp EEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHH--HHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEE
T ss_pred eecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHH--HHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEE
Confidence 0 00 00000011256689999999999 789999875431227999999877778888888888777
Q ss_pred eccCC
Q 010062 298 PHPLA 302 (519)
Q Consensus 298 ~~~~~ 302 (519)
.|...
T Consensus 256 ~H~~~ 260 (472)
T 1xhb_A 256 GHVFR 260 (472)
T ss_dssp EEEC-
T ss_pred EEEcc
Confidence 66543
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.90 E-value=3.5e-23 Score=225.54 Aligned_cols=209 Identities=12% Similarity=0.114 Sum_probs=153.5
Q ss_pred CCCCcEEEEeeccCCc-hHHHHHHHHHHhccCCC-CeEEEEEECCCCCcH-HHHHHHHHhhcCCCCceEEEEcCCCCCcc
Q 010062 81 IKLPRVTVVMPLKGFG-EHNLLNWRSQVTSLYGG-PLEFLFVVESKEDPA-YHSVLRLLQEFKDDVDAKVVVAGLSTTCS 157 (519)
Q Consensus 81 ~~~P~VSVIIP~~ne~-~~L~~~L~Sl~~q~yp~-~~eiIvV~d~s~D~t-~~i~~~l~~~~~~~~~v~vv~~~~~~~~~ 157 (519)
..+|+||||||+|||+ +.|.+||+|+++|+|+. .+|||||||+|+|++ .++++++.++++ +++++..+.+.
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~---~v~vi~~~~n~--- 182 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP---SVRILRTKKRE--- 182 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST---TEEEEECSSCC---
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC---eEEEEECCCCC---
Confidence 3578999999999999 99999999999999983 259999999999999 899999988876 69998876554
Q ss_pred hhHHHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCCChhhH------HH--Hhhcc
Q 010062 158 QKIHNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLGSY------CI--YEYHM 229 (519)
Q Consensus 158 ~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~~~------~~--~~~~~ 229 (519)
|+..+.|.|+++| +||||+|+|+|+.++|+||+.+++.+++++.+ +|++........++... .. ..+..
T Consensus 183 G~~~A~N~G~~~A--~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (570)
T 2d7i_A 183 GLIRTRMLGASVA--TGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEM 259 (570)
T ss_dssp CHHHHHHHHHHHC--CSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTC
T ss_pred CHHHHHHHHHHhc--CCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCcccccccccc
Confidence 4788899999999 79999999999999999999999999987765 45441111111111000 00 00000
Q ss_pred --c---ccc--ccc--cC-CCcccccccchhccHhhhccccccCcccCCCCCcccHHHHHHHHHhCCCcEEecCceeeec
Q 010062 230 --P---CSM--GFA--TG-GKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLAALAGAHNRLITSPPVAVFPH 299 (519)
Q Consensus 230 --~---~~~--~~~--~~-~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~~~~~~~g~~v~~~~~~~~~~ 299 (519)
. ... ... .. .......|+++++||++| +++|+|++-......||+|++.++.+.|+++.+.|.+.+.|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~--~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H 337 (570)
T 2d7i_A 260 YYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWF--WELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGH 337 (570)
T ss_dssp CEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHH--HHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred cccccccchhhhccCCCcceecccccceEEEEEHHHH--HhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEE
Confidence 0 000 000 00 011246699999999999 78999987543122799999987777888888888877766
Q ss_pred c
Q 010062 300 P 300 (519)
Q Consensus 300 ~ 300 (519)
.
T Consensus 338 ~ 338 (570)
T 2d7i_A 338 I 338 (570)
T ss_dssp C
T ss_pred E
Confidence 4
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.89 E-value=2.3e-22 Score=221.59 Aligned_cols=211 Identities=11% Similarity=0.030 Sum_probs=156.0
Q ss_pred CCCCcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhH
Q 010062 81 IKLPRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKI 160 (519)
Q Consensus 81 ~~~P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~ 160 (519)
...|+||||||+||+++.+.+||+|+.+|+++.++|||||||+|+|++.++++++... .+++++..+. ...+|.
T Consensus 90 ~~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~----~~i~~i~~~~--~~~g~~ 163 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESL----LNIKYVRQKD--YGYQLC 163 (625)
T ss_dssp CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTT----SCEEEEEECC--CSCCHH
T ss_pred ccCCcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhc----CCeEEEEeCC--CCcchh
Confidence 3468999999999999999999999999988768999999999999999888876433 1678877542 223588
Q ss_pred HHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCC-ChhhHHHH-hh--c--------
Q 010062 161 HNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSG-SLGSYCIY-EY--H-------- 228 (519)
Q Consensus 161 ~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~-~~~~~~~~-~~--~-------- 228 (519)
.|+|.|+++| +||+|+|+|+|+.++|++|..+++.++++|.++++++........ ........ .. .
T Consensus 164 ~a~N~g~~~a--~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (625)
T 2z86_A 164 AVRNLGLRAA--KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNN 241 (625)
T ss_dssp HHHHHHHHHC--CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-----
T ss_pred HHHHHHHHhC--CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCC
Confidence 9999999999 799999999999999999999999999889888887633222211 11111000 00 0
Q ss_pred ---------------cc---cccccc-cCCCcccccccchhccHhhhccccccCcccCCCCCc-ccHHHHHHHHHhCCCc
Q 010062 229 ---------------MP---CSMGFA-TGGKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGY-SDDMTLAALAGAHNRL 288 (519)
Q Consensus 229 ---------------~~---~~~~~~-~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~-~ED~~l~~~~~~~g~~ 288 (519)
.. ...... ......+..|+++++||++| +++|||++... .+ .||.+++.++.+.|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l--~~iGgfde~~~-~~g~ED~dl~~Rl~~~G~~ 318 (625)
T 2z86_A 242 QVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWL--FRAGWFDEEFT-HWGGEDNEFGYRLYREGCY 318 (625)
T ss_dssp ----------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHH--HHHCCCCTTCS-SCCCHHHHHHHHHHHTTCE
T ss_pred chhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHH--HHhCCCccccc-cCCcchhhhhhhHHhCCce
Confidence 00 000000 01112357899999999999 77999987543 33 6999999888888888
Q ss_pred EEecCceeeeccCC
Q 010062 289 ITSPPVAVFPHPLA 302 (519)
Q Consensus 289 v~~~~~~~~~~~~~ 302 (519)
+.+.|.+.+.|..+
T Consensus 319 i~~~p~~~v~H~~~ 332 (625)
T 2z86_A 319 FRSVEGAMAYHQEP 332 (625)
T ss_dssp EEECGGGCEEEECC
T ss_pred EEEcccchhhccCC
Confidence 88888877776654
No 7
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.89 E-value=4.8e-23 Score=209.40 Aligned_cols=204 Identities=13% Similarity=0.054 Sum_probs=139.8
Q ss_pred CCCcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHH
Q 010062 82 KLPRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIH 161 (519)
Q Consensus 82 ~~P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~ 161 (519)
..|+||||||+||+++.|.+||+|+++|+|+.++|||||||+|+|+|.++++++..+... +++++. ......||..
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~--~~~~~~--~~~~n~G~~~ 121 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVS--REQALP--EVPIRPGKGE 121 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEE--HHHHCT--TSCCCCSHHH
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhcc--ceeeec--cCCCCCCHHH
Confidence 468999999999999999999999999999855999999999999999988875332110 112221 1223346899
Q ss_pred HHHHHHHhccCCCcEEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeccccCCC-C--------ChhhHHH-Hhhc--
Q 010062 162 NQLVGVENMHKDSKYVLFLDDDVR-LHPGTIGALTTEMEKNPEIFIQTGYPLDLPS-G--------SLGSYCI-YEYH-- 228 (519)
Q Consensus 162 nl~~gl~~a~~~gd~vv~lDaD~~-~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~-~--------~~~~~~~-~~~~-- 228 (519)
|+|.|++.| +||||+|+|+|+. ++|++|.++++.+.++|++++|+|....... + ....+.. ....
T Consensus 122 a~n~g~~~a--~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (329)
T 3ckj_A 122 ALWRSLAAS--RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPL 199 (329)
T ss_dssp HHHHHHHHC--CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHHHH
T ss_pred HHHHHHHhC--CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHHH
Confidence 999999999 7999999999999 8999999999997767999999984322110 1 1111110 0000
Q ss_pred cccccccccCCCcccccccchhccHhhhccccccCcccCCCCCcccHHHHHH-HHHhCCC-cEEecCceeeecc
Q 010062 229 MPCSMGFATGGKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLAA-LAGAHNR-LITSPPVAVFPHP 300 (519)
Q Consensus 229 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~~-~~~~~g~-~v~~~~~~~~~~~ 300 (519)
....... .... ..+.|+++++||+++ +++| ++ . ++.||+++.. +++++|. .+...+.....|.
T Consensus 200 ~~~~~~~-~~~~-~~~~~g~~~~rr~~l--~~i~-f~---~-~~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h~ 264 (329)
T 3ckj_A 200 LAALRPE-LGCI-LQPLGGEYAATRELL--TSVP-FA---P-GYGVEIGLLVDTFDRLGLDAIAQVNLGVREHR 264 (329)
T ss_dssp HHHHCGG-GGGC-SCTTCSCEEEEHHHH--TTSC-BC---C-GGGHHHHHHHHHHHHHCGGGEEEEEEEECEEC
T ss_pred HHHhhhh-hccc-cCCCccceeeeHHHH--HhCC-CC---C-CCcccHHHHHHHHHhcCCccEeeecceEEecC
Confidence 0000000 0111 255688899999999 6686 43 2 5679999984 5554555 3776665544443
No 8
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.89 E-value=1.6e-22 Score=222.64 Aligned_cols=235 Identities=15% Similarity=0.038 Sum_probs=159.8
Q ss_pred CCCCCcEEEEeeccCCchHHHHHHHHHHhccC---CCCeEEEEEECCCCCcH--HHHHHHHHhhcCCCCceEEEEcCCCC
Q 010062 80 QIKLPRVTVVMPLKGFGEHNLLNWRSQVTSLY---GGPLEFLFVVESKEDPA--YHSVLRLLQEFKDDVDAKVVVAGLST 154 (519)
Q Consensus 80 ~~~~P~VSVIIP~~ne~~~L~~~L~Sl~~q~y---p~~~eiIvV~d~s~D~t--~~i~~~l~~~~~~~~~v~vv~~~~~~ 154 (519)
+...|+||||||+||+++.+.+||+|+.+|+| + .+|||||||+|+|++ .+..+.+....+ +++++..+ +.
T Consensus 176 ~~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~-~~EIIVVDNgStD~s~~~~~~e~~~~~~~---~I~vI~~~-N~ 250 (657)
T 4fix_A 176 APGTANIAVGIPTFNRPADCVNALRELTADPLVDQV-IGAVIVPDQGERKVRDHPDFPAAAARLGS---RLSIHDQP-NL 250 (657)
T ss_dssp CCSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTT-EEEEEEEECSSSCGGGSTTHHHHHHHHGG---GEEEEECC-CC
T ss_pred CCCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCC-CCEEEEEECcCCCccchHHHHHHHHhcCC---CEEEEECC-CC
Confidence 34468999999999999999999999999998 4 579999999999853 233333333333 78998765 44
Q ss_pred CcchhHHHHHHHHHhccC--CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCCC-------hhhHHHH
Q 010062 155 TCSQKIHNQLVGVENMHK--DSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGS-------LGSYCIY 225 (519)
Q Consensus 155 ~~~~K~~nl~~gl~~a~~--~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~-------~~~~~~~ 225 (519)
|...+.|.|++.|.. ++|||+|+|+|+.++|++|+++++.++.+|++++|++........+ +......
T Consensus 251 ---G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~ 327 (657)
T 4fix_A 251 ---GGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIF 327 (657)
T ss_dssp ---HHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTT
T ss_pred ---CHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccc
Confidence 355677788888742 4689999999999999999999999998889999987332222210 0000000
Q ss_pred hhc---------------ccc---ccc-cccCCCcccccccchhccHhhhccccccCcccCCCCCcccHHHHHHHHHhCC
Q 010062 226 EYH---------------MPC---SMG-FATGGKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLAALAGAHN 286 (519)
Q Consensus 226 ~~~---------------~~~---~~~-~~~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~~~~~~~g 286 (519)
.+. ... ... ........+..|+|+++||++| +++|+++... ...||.|++.++++.|
T Consensus 328 ~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~--~~vGgfd~~F--~~~ED~Dl~lR~~~~G 403 (657)
T 4fix_A 328 MWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVA--EELGQPLPLF--IKWDDADYGLRAAEHG 403 (657)
T ss_dssp EEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHH--HHHCSCCSCS--SSSHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccccccccceeccccchhHhHhhHHHH--HHhCCChhHh--ccCcHHHHHHHHHHcC
Confidence 000 000 000 0001112356788999999999 7799998653 4569999999888888
Q ss_pred CcEEecCceeeeccCCCC-C---CHHHHHHHhhhhHHHHHhhhcc
Q 010062 287 RLITSPPVAVFPHPLASD-L---SFGRYWNYLRKQTFVLESYISK 327 (519)
Q Consensus 287 ~~v~~~~~~~~~~~~~~~-~---~~~~~~~~~~rq~~~~~~y~~~ 327 (519)
+++.+.|.+++.|..... . .++.|+ ..+..+...+++.+.
T Consensus 404 ~ki~~~p~a~V~H~~~~~~~~~s~~r~Yy-~~RN~l~~~~k~~~~ 447 (657)
T 4fix_A 404 YPTVTLPGAAIWHMAWSDKDDAIDWQAYF-HLRNRLVVAAMHWDG 447 (657)
T ss_dssp CCEEEEEEEEEEECCSSSSCCTTSTHHHH-HHHHHHHHHHHHCCS
T ss_pred CeEEEECCEEEEEcCcCccccccHHHHHH-HHHHHHHHHHHhCCc
Confidence 888888888877753221 1 245554 335555555655544
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.88 E-value=2.8e-22 Score=220.93 Aligned_cols=199 Identities=12% Similarity=0.069 Sum_probs=151.9
Q ss_pred CCCcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHH
Q 010062 82 KLPRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIH 161 (519)
Q Consensus 82 ~~P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~ 161 (519)
..|.||||||+||+++.|.+||+|+++|+|+ ++|+|||||+|+|+|.++++++.++++ +++++. .++ .|+..
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~-~~eiivvdd~S~d~t~~~~~~~~~~~~---~i~~~~-~~n---~G~~~ 444 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALNQTIT-DLEVCICDDGSTDDTLRILQEHYANHP---RVRFIS-QKN---KGIGS 444 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHSSSCC-SEEEEEEEESCSSSHHHHHHHHHTTCT---TEEEEE-ECC---CCHHH
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHhCcCC-CeEEEEEECcCChhHHHHHHHHHhhCC---cEEEEe-CCC---CCHHH
Confidence 4689999999999999999999999999998 899999999999999999999887766 688875 333 35788
Q ss_pred HHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccC-CCCChhhHHHHhhccccccccccCCC
Q 010062 162 NQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDL-PSGSLGSYCIYEYHMPCSMGFATGGK 240 (519)
Q Consensus 162 nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (519)
++|.|++.| +||||+|+|+|+.++|++|+++++.++++|++++|++..... +.+...... +...........
T Consensus 445 a~n~g~~~a--~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-- 517 (625)
T 2z86_A 445 ASNTAVRLC--RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNG---YNWPIYSREKLT-- 517 (625)
T ss_dssp HHHHHHHHC--CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEEC---CCCSSCCHHHHT--
T ss_pred HHHHHHHhc--CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccC---cccccCCHHHHh--
Confidence 999999999 799999999999999999999999998789999998733222 222211000 000000000001
Q ss_pred cccccccchhccHhhhccccccCcccCCCCCcccHHHHHHHHHhCCCcEEecCceeeecc
Q 010062 241 TFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLAALAGAHNRLITSPPVAVFPHP 300 (519)
Q Consensus 241 ~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~~~~~~~g~~v~~~~~~~~~~~ 300 (519)
.....|+++++||+++ +++|||++.. ...||+++..++.+.| ++...|..++.+.
T Consensus 518 ~~~~~~~~~~~~r~~~--~~~ggfd~~~--~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r 572 (625)
T 2z86_A 518 SAMICHHFRMFTARAW--NLTEGFNESI--SNAVDYDMYLKLSEVG-PFKHINKICYNRV 572 (625)
T ss_dssp TSCCCCSCEEEEHHHH--TTTTCCCSSC--SSCHHHHHHHHHTTTS-CEEEEEEEEEEEE
T ss_pred hcccCCceEEEEHHHH--HHhCCCCCcc--CChHHHHHHHHHHHhC-CEEEeCCcEEEEE
Confidence 1245688999999999 7899998753 3679999998777778 5666666666543
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.88 E-value=1.6e-22 Score=217.06 Aligned_cols=206 Identities=14% Similarity=0.171 Sum_probs=148.0
Q ss_pred CCCCCcEEEEeeccCCch-HHHHHHHHHHhccCCC-CeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcc
Q 010062 80 QIKLPRVTVVMPLKGFGE-HNLLNWRSQVTSLYGG-PLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCS 157 (519)
Q Consensus 80 ~~~~P~VSVIIP~~ne~~-~L~~~L~Sl~~q~yp~-~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~ 157 (519)
+..+|.||||||+|||++ .|.+||+|+++|+|+. .+|||||||+|+|+|.+ +..++++ +++++..+++.
T Consensus 62 ~~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~---~~~~~~~---~v~vi~~~~n~--- 132 (501)
T 2ffu_A 62 RVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDG---ALLGKIE---KVRVLRNDRRE--- 132 (501)
T ss_dssp CSSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHH---HGGGGBT---TEEEEECSSCC---
T ss_pred CcCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHH---HHHhcCC---CEEEEECCCCc---
Confidence 345889999999999997 9999999999999983 26999999999999853 3345555 68998876554
Q ss_pred hhHHHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCCChhh-------HHHHhhccc
Q 010062 158 QKIHNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLGS-------YCIYEYHMP 230 (519)
Q Consensus 158 ~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~~-------~~~~~~~~~ 230 (519)
|+..++|.|+++| +||||+|+|+|+.++|+||+.+++.+++++. ++|++........++.. .....+...
T Consensus 133 G~~~A~N~G~~~A--~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (501)
T 2ffu_A 133 GLMRSRVRGADAA--QAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLKGGFDWNLV 209 (501)
T ss_dssp HHHHHHHHHHHHC--CSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEEEEECTTCC
T ss_pred CHHHHHHHHHHhc--CCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccceEeeecCC
Confidence 5888999999999 7999999999999999999999999998555 56665221111111100 000000000
Q ss_pred c----c------cc--cccCC-CcccccccchhccHhhhccccccCcccCCCCCc-ccHHHHHHHHHhCCCcEEecCcee
Q 010062 231 C----S------MG--FATGG-KTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGY-SDDMTLAALAGAHNRLITSPPVAV 296 (519)
Q Consensus 231 ~----~------~~--~~~~~-~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~-~ED~~l~~~~~~~g~~v~~~~~~~ 296 (519)
. . .. ..... ......|+++++||++| +++|+|++-.. .+ .||++++.++.+.|.++...|.+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~--~~iGgfde~~~-~~g~ED~dl~~Rl~~~G~~i~~~p~~~ 286 (501)
T 2ffu_A 210 FKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYF--EELGKYDMMMD-VWGGENLEISFRVWQCGGSLEIIPCSR 286 (501)
T ss_dssp EEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHH--HHTTCCCTTCC-SSSSHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHH--HHhCCCCcccc-ccCcchHHHHHHHHhcCCeEEEccCcE
Confidence 0 0 00 00000 11245689999999999 78999987543 33 899999987777787888888776
Q ss_pred eecc
Q 010062 297 FPHP 300 (519)
Q Consensus 297 ~~~~ 300 (519)
+.|.
T Consensus 287 v~H~ 290 (501)
T 2ffu_A 287 VGHV 290 (501)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7664
No 11
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.86 E-value=6.4e-22 Score=204.78 Aligned_cols=198 Identities=11% Similarity=-0.018 Sum_probs=139.9
Q ss_pred CCcEEEEeeccCCchHHHHHHHHHHh--ccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcC----CCCCc
Q 010062 83 LPRVTVVMPLKGFGEHNLLNWRSQVT--SLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAG----LSTTC 156 (519)
Q Consensus 83 ~P~VSVIIP~~ne~~~L~~~L~Sl~~--q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~----~~~~~ 156 (519)
.|+||||||+|||++.|.+||+|+.+ |+|+.++|||||||+|+|+|.++++++.. +++... .....
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~--------~v~~~~~~~i~~~~n 164 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGA--------EVYSENELMSGYGDA 164 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTC--------EEEEGGGTTGGGCSC
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCc--------hhcccceeEecCCcc
Confidence 57899999999999999999999987 57765799999999999999998887533 333221 11234
Q ss_pred chhHHHHHHHHHhccCCCcEEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeccccC-CC--------CChhhHHHHh
Q 010062 157 SQKIHNQLVGVENMHKDSKYVLFLDDDVR-LHPGTIGALTTEMEKNPEIFIQTGYPLDL-PS--------GSLGSYCIYE 226 (519)
Q Consensus 157 ~~K~~nl~~gl~~a~~~gd~vv~lDaD~~-~~pd~L~~lv~~l~~dp~vg~V~g~~~~~-~~--------~~~~~~~~~~ 226 (519)
.||..|+|.|++.| +||||+|+|+|+. ++|++|.++++.++++|++++|.|..... .. ++........
T Consensus 165 ~G~g~A~n~G~~~A--~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~ 242 (387)
T 3f1y_A 165 HGKGDAMWRALSVT--RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAK 242 (387)
T ss_dssp CSHHHHHHHHTTTC--CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTHH
T ss_pred CCHHHHHHHHHHhc--CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhHH
Confidence 56999999999999 7999999999999 89999999999998778999999854221 11 1111110000
Q ss_pred hccccccccccCCCcccccccchhccHhhhccccccCcccCCCCCcccHHHHH-HHHHhCCCc-EEecCceeeec
Q 010062 227 YHMPCSMGFATGGKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLA-ALAGAHNRL-ITSPPVAVFPH 299 (519)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~-~~~~~~g~~-v~~~~~~~~~~ 299 (519)
......... ..+. ..+.++++++||+++ ++++ ++ . ++++|.++. +.+++.|.+ |...|...+.|
T Consensus 243 ~l~~~~~~~-l~~~-~d~~sG~~a~rR~~l--~~i~-f~---~-gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h 308 (387)
T 3f1y_A 243 PLFNLFYPE-LAGF-VQPLAGEFVADRELF--CSIP-FL---T-GYAVETGIMIDVLKKVGLGAMAQVDLGERQN 308 (387)
T ss_dssp HHHHHHCGG-GTTC-SCTTCSCEEEEHHHH--TTSC-EE---C-STTHHHHHHHHHHHHHCGGGEEEEEEEECCC
T ss_pred HHHHHHhHh-hccc-cccccccEEEEHHHH--HhCC-CC---C-CcchHHHHHHHHHHhcCCCeEEEEecceeec
Confidence 000000000 0112 255688999999999 6674 32 3 688888887 455665654 88887776544
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.82 E-value=4.4e-22 Score=223.15 Aligned_cols=202 Identities=9% Similarity=0.049 Sum_probs=0.0
Q ss_pred CCcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHH
Q 010062 83 LPRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHN 162 (519)
Q Consensus 83 ~P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~n 162 (519)
+|+||||||+||+++.|.+||+|+++|+|+ ++|||||||+|+|+|.++++++.++++. +++++..+.+.| ...|
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~~-~~EIIVVDDgStD~t~~il~~~~~~~~~--~i~~i~~~~n~G---~~~a 74 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQRTQ-DFNLIIVNDGSTDQSKKLMDEAIKDYDK--NIRFIDLDENSG---HAHA 74 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhCCCC-CeEEEEEECCCCCcHHHHHHHHHHhCCC--CEEEEECCCCCC---HHHH
Confidence 478999999999999999999999999999 8999999999999999999999888664 688888765544 5667
Q ss_pred HHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCCChhhH--HHHhhccccccccccCCC
Q 010062 163 QLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLGSY--CIYEYHMPCSMGFATGGK 240 (519)
Q Consensus 163 l~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 240 (519)
.|.|++.| +||||+|+|+|+.++|++|+.+++.++ ++++.+.....+.......... ....+.... .. ....
T Consensus 75 rN~gi~~A--~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 148 (729)
T 3l7i_A 75 RNIALEEV--ETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAPIHSFTTQRPQFVDLDRVRVEYFNAK--EN-INSF 148 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhc--cCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEeeEEeecCCCccccccceeeeeecch--hh-HHHH
Confidence 88999999 799999999999999999999999998 4554333221111111111100 111110000 00 0001
Q ss_pred cccccccchhccHhhhcccccc-CcccCCCCCcccHHHHHHHHHhCCCcEEec-Cceeeecc
Q 010062 241 TFFLWGGCMMMHADDFRLDRYG-VVSGLRDGGYSDDMTLAALAGAHNRLITSP-PVAVFPHP 300 (519)
Q Consensus 241 ~~~~~G~~~~~Rr~~~~~~~~G-g~~~~~~g~~~ED~~l~~~~~~~g~~v~~~-~~~~~~~~ 300 (519)
.....++++++||+++ +++| +|++-. .+.||.+++.++...|.++.+. +..++++.
T Consensus 149 ~~~~~~~~~~~rr~~l--~~~gl~fde~~--~~~ED~d~~~rl~~~g~~i~~~~~~~~~~yr 206 (729)
T 3l7i_A 149 LRKQSACNIIFRTAIV--RAHHIRFNENL--NTYVDWSFVLEYMKYVNKFVRIFNFPFYFRG 206 (729)
T ss_dssp --------------------------------------------------------------
T ss_pred hhccchhheeeeHHHH--HHcCCCcCCCC--CcccCHHHHHHHHHhcCCEEEecCcEEEEEE
Confidence 1134577899999999 7788 677632 4689999996656666566555 66655543
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.77 E-value=8e-18 Score=164.00 Aligned_cols=180 Identities=13% Similarity=-0.037 Sum_probs=119.1
Q ss_pred CCCcEEEEeeccCCchHHHHHHHHHHhccC-CCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhH
Q 010062 82 KLPRVTVVMPLKGFGEHNLLNWRSQVTSLY-GGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKI 160 (519)
Q Consensus 82 ~~P~VSVIIP~~ne~~~L~~~L~Sl~~q~y-p~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~ 160 (519)
+.|.+||| |+||+++.+.+||+|+.++.. +..+|||||||+|+|. . + ..
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~------------~--------------g---~a 63 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ------------F--------------H---GF 63 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS------------C--------------C---TT
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc------------c--------------c---HH
Confidence 45689975 779999999999998865322 2129999999999872 0 1 12
Q ss_pred HHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHh----CCCeEEEEecccc-CCCCChhhHHHHhhccc----c
Q 010062 161 HNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEK----NPEIFIQTGYPLD-LPSGSLGSYCIYEYHMP----C 231 (519)
Q Consensus 161 ~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~----dp~vg~V~g~~~~-~~~~~~~~~~~~~~~~~----~ 231 (519)
.+.|.|+++| +|||++|+|+|+.++|+||+++++.+++ +|++|+++..... ...+............. .
T Consensus 64 ~a~N~Gi~~A--~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 141 (249)
T 2nxv_A 64 SWHKQMLPRC--KGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSVTAQALHISDVFGNDR 141 (249)
T ss_dssp THHHHHGGGC--CSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTSCCCEEEEEETTEEEE
T ss_pred HHHHHHHHhc--CCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCceeeecccccCCcccccc
Confidence 4567899999 7999999999999999999999999986 4999988742111 11111000000000000 0
Q ss_pred ccccccCCCcccccccchhccHhhhccccccCcccCCCCCcccHHHHHHHHHhCCCcEEecCceeeec
Q 010062 232 SMGFATGGKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLAALAGAHNRLITSPPVAVFPH 299 (519)
Q Consensus 232 ~~~~~~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~~~~~~~g~~v~~~~~~~~~~ 299 (519)
..+ ..........|++|++||++ .||||+...+.+.||.|++.++++.|+++.+.|..++++
T Consensus 142 ~~~-~~~~~v~~~~g~~~~~rr~~-----~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~v~H~ 203 (249)
T 2nxv_A 142 RRG-NVPCRVESLDECFLLMRRLK-----PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFHLHHY 203 (249)
T ss_dssp EES-CSSEEEEEECTTEEEEETTB-----CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCCCEEC
T ss_pred ccC-CCceEcCeeeeEeeEEEHhh-----hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccEEEEC
Confidence 000 00001124578999999997 467775323234589999988888898888887664443
No 14
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.66 E-value=7.2e-17 Score=160.23 Aligned_cols=150 Identities=13% Similarity=0.117 Sum_probs=103.8
Q ss_pred CCCcEEEEeeccCCchHHHHHHHHHH---hccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcch
Q 010062 82 KLPRVTVVMPLKGFGEHNLLNWRSQV---TSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQ 158 (519)
Q Consensus 82 ~~P~VSVIIP~~ne~~~L~~~L~Sl~---~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~ 158 (519)
..|+||||||+||+++.|.+||+|+. +|+|+ ++|||||||++ |.. . +
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~-~~EIiVVdds~-d~~----------------f------------~ 112 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQL-DYGIYVINQAG-DTI----------------F------------N 112 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC-EEEEEEEEECS-SSC----------------C------------C
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcC-CceEEEEEeCC-CCc----------------c------------c
Confidence 35799999999999999999999999 78888 89999998843 311 0 1
Q ss_pred hHHHHHHHH----HhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCCChhhHHHHhhccccccc
Q 010062 159 KIHNQLVGV----ENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLGSYCIYEYHMPCSMG 234 (519)
Q Consensus 159 K~~nl~~gl----~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (519)
|..++|.|+ +.| +||||+|+|+|+.++|+++.... ..+|+. . ...... ..+..
T Consensus 113 ~a~a~N~G~~~al~~A--~gd~i~flD~D~i~~~d~~~~~~---~~~p~~---------~--~~~~~~--~~~~~----- 169 (287)
T 2fy7_A 113 RAKLLNVGFQEALKDY--DYTCFVFSDVDLIPMNDHNAYRC---FSQPRH---------I--SVAMDK--FGFSL----- 169 (287)
T ss_dssp HHHHHHHHHHHHHHHS--CCCEEEEECTTEEESBTTSCCSC---CSSCEE---------C--CCEEGG--GTTSC-----
T ss_pred hhhhhhhHHHHHHHhC--CCCEEEEECCCcccCCCcceEec---CCCCce---------E--EEeecc--cccCC-----
Confidence 344556666 777 79999999999999999621000 001110 0 000000 00100
Q ss_pred cccCCCcccccccchhccHhhhccccccCcccCCCCCc-ccHHHHHHHHHhCCCcEEec
Q 010062 235 FATGGKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGY-SDDMTLAALAGAHNRLITSP 292 (519)
Q Consensus 235 ~~~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~-~ED~~l~~~~~~~g~~v~~~ 292 (519)
.. ....|+++++||++| +++|||++-.. ++ .||.|++.++++.|+++..+
T Consensus 170 ----~~-~~~~G~~~~~rr~~f--~~vgGFde~~~-g~g~ED~Dl~~Rl~~~G~~i~~~ 220 (287)
T 2fy7_A 170 ----PY-VQYFGGVSALSKQQF--LTINGFPNNYW-GWGGEDDDIFNRLVFRGMSISRP 220 (287)
T ss_dssp ----SS-TTCCCSEEEEEHHHH--HHTTSCCSCCS-SCSCHHHHHHHHHHHTTCCCBCC
T ss_pred ----Cc-CceeeeEEEEEHHHH--HHcCCCCcccc-ccccchHHHHHHHHHcCCeEEec
Confidence 11 245699999999999 78999998544 44 49999998888888777743
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.61 E-value=1.7e-15 Score=156.51 Aligned_cols=192 Identities=14% Similarity=0.060 Sum_probs=122.6
Q ss_pred EEeeccCCchHHHHHHHHHH-hccCCCCeEEEEEECCCCCcHHHHHHHHHhhcC-CCCceEEEEcC-CCCC--cchhHHH
Q 010062 88 VVMPLKGFGEHNLLNWRSQV-TSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFK-DDVDAKVVVAG-LSTT--CSQKIHN 162 (519)
Q Consensus 88 VIIP~~ne~~~L~~~L~Sl~-~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~-~~~~v~vv~~~-~~~~--~~~K~~n 162 (519)
||||+ ||+ ++..+++++. .+.+| ++|||||||+|+|.|.+++++++++.+ .. +++++... ++.+ ..||..|
T Consensus 4 VIiP~-~eE-~I~~vl~~l~~~~~~~-~~EIIVVDDGStD~T~eia~~la~~~~~~~-g~~vi~~~~~r~~~~n~GkG~A 79 (397)
T 2bo4_A 4 VVFPF-KHE-HPEVLLHNVRVAAAHP-RVHEVLCIGYERDQTYEAVERAAPEISRAT-GTPVSVRLQERLGTLRPGKGDG 79 (397)
T ss_dssp EEEEC-CSS-CHHHHHHHHHHHHHST-TCCEEEEEESSCCHHHHHHHHHHHHHHHHH-SCCEEEEECCCCSSSSSSHHHH
T ss_pred EEEeC-Ccc-CHHHHHHHHHHhccCC-CeEEEEEECcCCccHHHHHHHhhhhccccc-CCeEEEEecccCCCCCCCHHHH
Confidence 45555 443 6889999885 34566 799999999999999999997766554 11 23443221 1112 3579999
Q ss_pred HHHHH----HhccCCCcEEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeccccCCCCChhhH-H-HH--hhcccccc
Q 010062 163 QLVGV----ENMHKDSKYVLFLDDDVR-LHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLGSY-C-IY--EYHMPCSM 233 (519)
Q Consensus 163 l~~gl----~~a~~~gd~vv~lDaD~~-~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~~~-~-~~--~~~~~~~~ 233 (519)
++.|+ +++ +||+++++|||.. .+|+++.+|+++++ +++++|.|.......++.... . +. ........
T Consensus 80 l~~G~~~Al~~a--~gd~vv~mDADlq~~~P~~i~~Ll~~l~--~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~~ 155 (397)
T 2bo4_A 80 MNTALRYFLEET--QWERIHFYDADITSFGPDWITKAEEAAD--FGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTE 155 (397)
T ss_dssp HHHHHHHHHHHC--CCSEEEECCTTCSSCCHHHHHHHHHHHH--TTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSS
T ss_pred HHHHHHHHHHhC--CCCEEEEEcCCCCCCCHHHHHHHHHHHH--cCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHhh
Confidence 99999 777 7999999999996 89999999999996 358888883222122222211 1 11 00111100
Q ss_pred ccccCCCcccccccchhccHhhhccccccCcccC-CCCCcccHHHHHHHHHhCCCcEEecC
Q 010062 234 GFATGGKTFFLWGGCMMMHADDFRLDRYGVVSGL-RDGGYSDDMTLAALAGAHNRLITSPP 293 (519)
Q Consensus 234 ~~~~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~-~~g~~~ED~~l~~~~~~~g~~v~~~~ 293 (519)
.. .. ..+.++..++||+++ +++.....+ ...+++.|.++...+.+.|.+|...|
T Consensus 156 ~~---~i-~dp~sG~~a~~R~vl--~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 156 LS---WI-EQPLGGELLMRREVA--AMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp GG---GC-SCTTCCCEEEEHHHH--HHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred cc---cc-ccCCcccEEEeHHHH--HHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEE
Confidence 00 11 133466668999999 444211100 12367889999877777777887655
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.25 E-value=3.1e-11 Score=119.72 Aligned_cols=121 Identities=12% Similarity=0.078 Sum_probs=89.8
Q ss_pred CcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcH---HHHHHHHHhhcCCCCceEEEEcCCC-------
Q 010062 84 PRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPA---YHSVLRLLQEFKDDVDAKVVVAGLS------- 153 (519)
Q Consensus 84 P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t---~~i~~~l~~~~~~~~~v~vv~~~~~------- 153 (519)
.++|||||+|||+.. +|+++++|.+. ++|+|+|||+|+|.+ .++++++++.... ++.+++...+
T Consensus 53 ~klSIVVPvYNEe~~---lLesVl~qi~~-d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~--ri~viHQkn~gls~Ar~ 126 (391)
T 2wvl_A 53 EQTAIVVPTRNERLK---LLEGVLSGIPH-EALILVASNSSPDRFQMERDLLEEFAHLTER--PALIFHQKDPALAEALR 126 (391)
T ss_dssp TTEEEEEEESSCCHH---HHHHHHHTSCT-TSEEEEEECCCHHHHHHHHHHHHHHHHHTTC--CEEEEETTCHHHHHHHH
T ss_pred hceEEEEeccCcHHH---HHHHHHhcCCC-CceEEEEECCCCCChHhHHHHHHHHHhhccc--ceEEEeccChHHHHHHH
Confidence 479999999999974 69999999997 899999999999999 5788888874333 6888863110
Q ss_pred ------------CCcchhHHHHHHHHHhcc-CCCcEEEEEcCCCccChHHHHHH---HHHH--HhCCCeEEE-Eecc
Q 010062 154 ------------TTCSQKIHNQLVGVENMH-KDSKYVLFLDDDVRLHPGTIGAL---TTEM--EKNPEIFIQ-TGYP 211 (519)
Q Consensus 154 ------------~~~~~K~~nl~~gl~~a~-~~gd~vv~lDaD~~~~pd~L~~l---v~~l--~~dp~vg~V-~g~~ 211 (519)
.-.+||..++..|+..|+ ..+|||.|+|||..++.+..+.+ .+-| .. ....+| -+.+
T Consensus 127 ~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~-s~~~MVRI~wR 202 (391)
T 2wvl_A 127 AGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAK-TPFAMVRILWR 202 (391)
T ss_dssp HTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCC-SSEEEEEEECC
T ss_pred hcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccC-CCcceEEEecc
Confidence 123678888999998872 24899999999999977654433 2222 22 346777 4533
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.21 E-value=6.7e-11 Score=120.54 Aligned_cols=108 Identities=18% Similarity=0.222 Sum_probs=82.5
Q ss_pred cEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcH------HHHHHHHHhhcCCCCceEEEEcCCC-----
Q 010062 85 RVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPA------YHSVLRLLQEFKDDVDAKVVVAGLS----- 153 (519)
Q Consensus 85 ~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t------~~i~~~l~~~~~~~~~v~vv~~~~~----- 153 (519)
++|||||+|||+..+ +..++++-.. .+|||+|||+|+|+| .++++++.+..+. .+.++....+
T Consensus 52 ~iSVVIP~yNEE~~l---I~~vL~~i~~-~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~--~~~Vl~~~~p~v~~~ 125 (394)
T 2zu9_A 52 KMAVIVPMKNEKLHL---VDGVLKAIPH-KCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHS--KIIMIHQKDPGLAKA 125 (394)
T ss_dssp TEEEEEEESSCCHHH---HHHHHHHSCT-TSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCC--CEEEEETTCHHHHHH
T ss_pred CEEEEEecCcccHHH---HHHHHHcCCC-CcEEEEEECcCcccccchhhHHHHHHHHhhcccc--ceEEEecCCcchhHH
Confidence 699999999999754 5555554332 689999999998877 6778887776554 4566654331
Q ss_pred --------------CCcchhHHHHHHHHHhc-cCCCcEEEEEcCCCccChHHHHHHHHHHH
Q 010062 154 --------------TTCSQKIHNQLVGVENM-HKDSKYVLFLDDDVRLHPGTIGALTTEME 199 (519)
Q Consensus 154 --------------~~~~~K~~nl~~gl~~a-~~~gd~vv~lDaD~~~~pd~L~~lv~~l~ 199 (519)
...+||..|+..|+..| ..++|+|+|+|+|. ..|..+.++++.+.
T Consensus 126 ~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 126 FKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYA 185 (394)
T ss_dssp HHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHH
T ss_pred hhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhh
Confidence 23469999999999988 22479999999999 77888888887765
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.90 E-value=2.8e-09 Score=107.68 Aligned_cols=202 Identities=7% Similarity=0.032 Sum_probs=113.9
Q ss_pred CcEEEEeeccCCchHHHHHHHHHHhccCCC-CeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEc---------CCC
Q 010062 84 PRVTVVMPLKGFGEHNLLNWRSQVTSLYGG-PLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVA---------GLS 153 (519)
Q Consensus 84 P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~-~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~---------~~~ 153 (519)
+.++|||++||..+ +.+||+|+++|..+. ++|+||.||++++++.++++++.. +++.+.. +++
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~------~I~~~~~~d~~~~~~~~~N 74 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGS------AVTHIRQPDLSNIAVQPDH 74 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGG------GSEEEECSCCCCCCCCTTC
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCC------ceEEEEcCCccccccchhh
Confidence 45899999999998 999999999998542 489999999998888777766432 2443321 112
Q ss_pred CCcc-------hhHHHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHH---HHHHhCCCeEEEEeccccCCCCChhhHH
Q 010062 154 TTCS-------QKIHNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALT---TEMEKNPEIFIQTGYPLDLPSGSLGSYC 223 (519)
Q Consensus 154 ~~~~-------~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv---~~l~~dp~vg~V~g~~~~~~~~~~~~~~ 223 (519)
.|+. .-..+++..++.+ ++|+++++|+|+.++||+++-+. ..+++|+.+..++++...... . ..
T Consensus 75 ~g~~~y~~ia~h~~~al~~vf~~~--~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~n~~g~~-~---~~ 148 (343)
T 1fo8_A 75 RKFQGYYKIARHYRWALGQIFHNF--NYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDNGKE-Q---MV 148 (343)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHTTS--CCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCCTTCBG-G---GS
T ss_pred cCcccchhHhHHHHHHHHHHHHhc--cCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecccCcccc-c---cc
Confidence 1210 0013555555555 68999999999999999885554 455788999999884322110 0 00
Q ss_pred HHhhccccccccccCCCcccccccchhccHhhhccccccCcccCCCCCcccHHHHHHHHHhCCCcEEecCceeeeccCCC
Q 010062 224 IYEYHMPCSMGFATGGKTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLAALAGAHNRLITSPPVAVFPHPLAS 303 (519)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~~~~~~~g~~v~~~~~~~~~~~~~~ 303 (519)
.........+. .+..|-..+..|+.++ ++ -..|.. .+ -|.-+-....+.|+....|....+.|....
T Consensus 149 --~~~~~~~lyrs-----~~f~~wGWa~wr~~W~--e~--~~~wp~-~~-Wd~w~r~~~~~~~r~ci~P~vsrv~n~G~~ 215 (343)
T 1fo8_A 149 --DSSKPELLYRT-----DFFPGLGWLLLAELWA--EL--EPKWPK-AF-WDDWMRRPEQRKGRACVRPEISRTMTFGRK 215 (343)
T ss_dssp --CTTCTTCEEEE-----SSCCCSSEEEEHHHHH--HH--GGGCCS-SC-HHHHHTSHHHHTTCEEEEESSBSEEECC--
T ss_pred --cccCcceEEee-----cCCCchhhhhcHHHHH--HH--hhhcch-hH-HHHHHHHHHHhCCCEEEEeccceeEecccc
Confidence 00000001111 1222334678888883 32 123433 22 233232233455666666766656554433
Q ss_pred CCCHHHHH
Q 010062 304 DLSFGRYW 311 (519)
Q Consensus 304 ~~~~~~~~ 311 (519)
..+...|+
T Consensus 216 G~~~~~f~ 223 (343)
T 1fo8_A 216 GVSHGQFF 223 (343)
T ss_dssp --------
T ss_pred CcchhHHH
Confidence 44556665
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=97.70 E-value=0.00012 Score=70.56 Aligned_cols=152 Identities=14% Similarity=0.115 Sum_probs=96.7
Q ss_pred CcEEEEeeccCCchHHHHHHHHHH----hccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchh
Q 010062 84 PRVTVVMPLKGFGEHNLLNWRSQV----TSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQK 159 (519)
Q Consensus 84 P~VSVIIP~~ne~~~L~~~L~Sl~----~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K 159 (519)
-+|+||||-+|.+++|...|..+. +|.- +|.|+||+...+. ..| |
T Consensus 51 ~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l--~y~I~VieQ~~~~----------------------------~FN-R 99 (287)
T 3lw6_A 51 HKMALLVPFRDRFEELLQFVPHMTAFLKRQGV--AHHIFVLNQVDRF----------------------------RFN-R 99 (287)
T ss_dssp CEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC--EEEEEEEEECSSS----------------------------CCC-H
T ss_pred ceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC--ceEEEEEecCCCC----------------------------ccc-h
Confidence 489999999999998888776542 3432 5787766654221 111 4
Q ss_pred HHHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCCChhhHHHHhhccccccccccCC
Q 010062 160 IHNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLGSYCIYEYHMPCSMGFATGG 239 (519)
Q Consensus 160 ~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (519)
+.-+|.|+..|..+.|+++|-|.|..+..|... .. .|+. .+ |.-... ..++.. . .
T Consensus 100 a~LlNvGf~ea~~~~d~~ifHDVDLlP~dd~n~-----Y~-c~~~---~~-P~Hls~--------~~~~~~------~-~ 154 (287)
T 3lw6_A 100 ASLINVGFQFASDVYDYIAMHDVDLLPLNDNLL-----YE-YPSS---LG-PLHIAG--------PKLHPK------Y-H 154 (287)
T ss_dssp HHHHHHHHHHSCTTCCEEEEECTTEEECCTTSC-----CC-CCCT---TC-CEESSC--------TTTCSS------C-C
T ss_pred hheecccHHHHhccCCEEEEecccccccCCCcc-----cc-CCCC---CC-ceEEee--------ccccCC------C-C
Confidence 455777888887678999999999998644111 00 0100 00 100000 011111 0 1
Q ss_pred CcccccccchhccHhhhccccccCcccCCCCCcccHHHHHHHHHhCCCcEEecCc
Q 010062 240 KTFFLWGGCMMMHADDFRLDRYGVVSGLRDGGYSDDMTLAALAGAHNRLITSPPV 294 (519)
Q Consensus 240 ~~~~~~G~~~~~Rr~~~~~~~~Gg~~~~~~g~~~ED~~l~~~~~~~g~~v~~~~~ 294 (519)
. ...+|++++++|+.| .++|||++-..|-=.||.|+..++...|.++.-++.
T Consensus 155 Y-~~~~GGv~a~~re~f--~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~ 206 (287)
T 3lw6_A 155 Y-DNFVGGILLVRREHF--KQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQN 206 (287)
T ss_dssp C-TTCCCSEEEEEHHHH--HHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSS
T ss_pred c-CCccccEEeccHHHH--HHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCC
Confidence 1 256799999999999 779999986542235999999888888887776653
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=97.20 E-value=0.0012 Score=59.97 Aligned_cols=105 Identities=12% Similarity=0.039 Sum_probs=61.6
Q ss_pred CCcEEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEeccccCCCCChhhHHHHhhccccccccccCCCcccccccch
Q 010062 173 DSKYVLFLDDD---VRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLGSYCIYEYHMPCSMGFATGGKTFFLWGGCM 249 (519)
Q Consensus 173 ~gd~vv~lDaD---~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 249 (519)
++|+++|+||| ...+|+.+.+++ + .+.++|+|.+ +....+-.+.....+.. ... .+....+..|+|
T Consensus 53 ~~dhllfIDAD~~~I~FdPe~V~rLl---~--~g~DVV~GsY-p~K~~~~~s~~a~~y~~-~i~----~~~V~d~~tGF~ 121 (203)
T 2c0n_A 53 DYDTLAFLDEDVVPIEIDFQKVEAKF---N--EGYDVVCGYY-YLKTLRGYSVYRKDWEK-EIF----DGEVNGCGLGFT 121 (203)
T ss_dssp TCCEEEEECTTEEEEECCHHHHHHHH---H--HTCSEEEEEC-BCTTSSSBSEESSSBCS-SCC----CEECSEECSSEE
T ss_pred CCCEEEEEeCCCCccccCHHHHHHHH---h--CCCCEEEEEe-eccCCCccchHHHHHHH-hcc----CceeeeccccEE
Confidence 57999999999 999999999998 3 3567888833 32221100000000100 000 111225567899
Q ss_pred hccHhhhccccccCc-----ccCCCCCcccHHHHHHHHHhCCCcE
Q 010062 250 MMHADDFRLDRYGVV-----SGLRDGGYSDDMTLAALAGAHNRLI 289 (519)
Q Consensus 250 ~~Rr~~~~~~~~Gg~-----~~~~~g~~~ED~~l~~~~~~~g~~v 289 (519)
+++|++|+.-..-.| ++..+ ..+||+.++..++..+..+
T Consensus 122 lIkR~V~e~L~~p~fl~~~~~e~~~-~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 122 FIKREFLEKIKRPAFLAFKPIESPH-WIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp EEEHHHHTTSCSSCCCC----------CCHHHHHHHHHCCCEEEE
T ss_pred EEhHHHHHHHhhhhhhcCChhhhcc-ccCCceEEEeccccccccc
Confidence 999999944211212 11223 5679999999998888777
No 21
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=94.53 E-value=0.12 Score=50.41 Aligned_cols=116 Identities=12% Similarity=0.021 Sum_probs=75.0
Q ss_pred CcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHH
Q 010062 84 PRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQ 163 (519)
Q Consensus 84 P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl 163 (519)
...||||-+|+..+.|.+.++++.+..+- -||+||=++...+..+ +.+-.-.++.+.++++....+. .+|-
T Consensus 28 ~~FTvvi~ty~R~~~L~~lv~~~~~~~~v--~~IvVvWn~~~~~pp~--~~~~~~~~~~vpv~v~~~~~ns-----LnnR 98 (293)
T 1omz_A 28 DSFTLIMQTYNRTDLLLRLLNHYQAVPSL--HKVIVVWNNVGEKGPE--ELWNSLGPHPIPVIFKPQTANK-----MRNR 98 (293)
T ss_dssp TCEEEEEEESSCHHHHHHHHHHHTTSTTE--EEEEEEECCTTCCCTH--HHHHHTCCCSSCEEEEECSSCC-----GGGG
T ss_pred CceEEEEEeecccHHHHHHHHHHhcCCCC--CeEEEEeCCCCCCCCh--hhccccCCCCccEEEEeCCCCc-----hhhc
Confidence 37999999999988899998887655432 4666665665433222 1122212222367777654432 1111
Q ss_pred HHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecc
Q 010062 164 LVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYP 211 (519)
Q Consensus 164 ~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~ 211 (519)
-.-.... ++|-|+.+|+|+.++.+-|+......+++|+ -+|+-++
T Consensus 99 F~p~~~i--~T~AVLslDDDv~l~~~el~faF~vWr~~Pd-RlVGf~~ 143 (293)
T 1omz_A 99 LQVFPEV--ETNAVLMVDDDTLISAQDLVFAFSIWQQFPD-QIIGFVP 143 (293)
T ss_dssp GSCCTTC--CSSEEEEECTTEEECHHHHHHHHHHHTTSTT-SEEESCE
T ss_pred cCCCccC--CcCEEEEEcCCCCCCHHHHHHHHHHHHHCcc-ceecCch
Confidence 1122233 6899999999999999999998888888888 4666543
No 22
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=94.50 E-value=0.57 Score=44.65 Aligned_cols=100 Identities=8% Similarity=-0.021 Sum_probs=61.7
Q ss_pred CCchHHHHHH-HHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccC
Q 010062 94 GFGEHNLLNW-RSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHK 172 (519)
Q Consensus 94 ne~~~L~~~L-~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~ 172 (519)
+..+.+..++ +.+.+.. . -+|+++.|+ +.+++...++ +++++..... ..+|. ..+..+++....
T Consensus 24 ~GkPli~~~i~~~~~~~~-~--~~vvVvt~~------~~i~~~~~~~----g~~v~~~~~~-~~~Gt-~~i~~a~~~~~~ 88 (253)
T 4fcu_A 24 HDRPMILRVVDQAKKVEG-F--DDLCVATDD------ERIAEICRAE----GVDVVLTSAD-HPSGT-DRLSEVARIKGW 88 (253)
T ss_dssp TTEEHHHHHHHHHHTCTT-C--CEEEEEESC------HHHHHHHHTT----TCCEEECCTT-CCCHH-HHHHHHHHHHTC
T ss_pred CCeEhHHHHHHHHHHhcC-C--CEEEEECCH------HHHHHHHHHc----CCeEEEeCCC-CCChH-HHHHHHHHhcCc
Confidence 4456889999 8887643 2 377777652 2234444444 3445443221 12222 345566666531
Q ss_pred -CCcEEEEEcCCC-ccChHHHHHHHHHHHhCCCeEEEE
Q 010062 173 -DSKYVLFLDDDV-RLHPGTIGALTTEMEKNPEIFIQT 208 (519)
Q Consensus 173 -~gd~vv~lDaD~-~~~pd~L~~lv~~l~~dp~vg~V~ 208 (519)
+.|+++++++|. .++|+.|+++++.+.++++.++++
T Consensus 89 ~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at 126 (253)
T 4fcu_A 89 DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMST 126 (253)
T ss_dssp CTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEE
T ss_pred CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEE
Confidence 358999999999 678999999999997665544433
No 23
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=94.39 E-value=0.91 Score=43.32 Aligned_cols=97 Identities=14% Similarity=0.229 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhcc-CCCc
Q 010062 97 EHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMH-KDSK 175 (519)
Q Consensus 97 ~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~-~~gd 175 (519)
+.+..+++.+.+..- -+|+++.| | +.+++...++ +++++...+. ...|..+ +..+++... .+.|
T Consensus 35 Pli~~~l~~l~~~~i---~~VvVvt~---~---~~i~~~~~~~----g~~v~~~~~~-~~~Gt~~-i~~a~~~l~~~~~d 99 (256)
T 3tqd_A 35 PMIQHVYESAIKSGA---EEVVIATD---D---KRIRQVAEDF----GAVVCMTSSD-HQSGTER-IAEAAVALGFEDDE 99 (256)
T ss_dssp EHHHHHHHHHHHTTC---SEEEEEES---C---HHHHHHHHHT----TCEEEECCTT-CCSHHHH-HHHHHHHTTCCTTC
T ss_pred hHHHHHHHHHHhCCC---CEEEEECC---H---HHHHHHHHHc----CCeEEEeCCC-CCCcHHH-HHHHHHHhCcCCCC
Confidence 578888888877532 36666654 2 2344444444 3555553222 1223333 556666652 1368
Q ss_pred EEEEEcCCC-ccChHHHHHHHHHHHhCCCeEEEE
Q 010062 176 YVLFLDDDV-RLHPGTIGALTTEMEKNPEIFIQT 208 (519)
Q Consensus 176 ~vv~lDaD~-~~~pd~L~~lv~~l~~dp~vg~V~ 208 (519)
.++++++|. .++++.++++++.+.++++.++++
T Consensus 100 ~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~ 133 (256)
T 3tqd_A 100 IIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVAS 133 (256)
T ss_dssp EEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEE
T ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEE
Confidence 999999999 578999999999997656655444
No 24
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=93.19 E-value=2.5 Score=39.15 Aligned_cols=94 Identities=11% Similarity=0.053 Sum_probs=59.9
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCC--CCcchhHHHHHHHHHhcc
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLS--TTCSQKIHNQLVGVENMH 171 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~--~~~~~K~~nl~~gl~~a~ 171 (519)
+..+.+..+++.+.+...- -+++++.++ + .+++...++ +++++..+.. .+..+....+..+++...
T Consensus 26 ~Gkpli~~~i~~~~~~~~~--~~ivv~~~~--~----~i~~~~~~~----g~~~~~~~~~~~~~~~~~~~~v~~al~~~~ 93 (229)
T 1qwj_A 26 AGVPLIGWVLRAALDAGVF--QSVWVSTDH--D----EIENVAKQF----GAQVHRRSSETSKDSSTSLDAIVEFLNYHN 93 (229)
T ss_dssp TTEEHHHHHHHHHHHHTCC--SEEEEEESC--H----HHHHHHHHT----TCEEEECCGGGSSTTCCHHHHHHHHHTTCT
T ss_pred CCEEHHHHHHHHHHhCCCc--CEEEEECCh--H----HHHHHHHHc----CCEEEeChhhhcCCCCcHHHHHHHHHHhcC
Confidence 3456888899998876432 266666631 1 233434443 3566554321 122223456677777663
Q ss_pred CCCcEEEEEcCCCc-cChHHHHHHHHHHHh
Q 010062 172 KDSKYVLFLDDDVR-LHPGTIGALTTEMEK 200 (519)
Q Consensus 172 ~~gd~vv~lDaD~~-~~pd~L~~lv~~l~~ 200 (519)
+.|.++++++|.- ++++.++++++.+.+
T Consensus 94 -~~d~vlv~~~D~Pli~~~~i~~l~~~~~~ 122 (229)
T 1qwj_A 94 -EVDIVGNIQATSPCLHPTDLQKVAEMIRE 122 (229)
T ss_dssp -TCSEEEEECTTCTTCCHHHHHHHHHHHHS
T ss_pred -CCCEEEEecCCCCcCCHHHHHHHHHHHHh
Confidence 4689999999995 689999999998875
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=92.26 E-value=0.85 Score=43.75 Aligned_cols=95 Identities=11% Similarity=0.074 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhcc-CCCc
Q 010062 97 EHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMH-KDSK 175 (519)
Q Consensus 97 ~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~-~~gd 175 (519)
+.+..+++.+.+..- -+|+++.| + +.++++..++ +++++...... ..|..+ +..+++... .+.|
T Consensus 44 Pmi~~~l~~l~~~~i---~~IvV~t~---~---~~i~~~~~~~----g~~v~~~~~~~-~~Gt~~-i~~~~~~l~~~~~d 108 (264)
T 3k8d_A 44 PMIVHVLERARESGA---ERIIVATD---H---EDVARAVEAA----GGEVCMTRADH-QSGTER-LAEVVEKCAFSDDT 108 (264)
T ss_dssp EHHHHHHHHHHHTTC---SEEEEEES---C---HHHHHHHHHT----TCEEEECCTTC-CSHHHH-HHHHHHHHTCCTTC
T ss_pred EHHHHHHHHHHhCCC---CEEEEECC---H---HHHHHHHHHc----CCEEEEecCCC-CCCHHH-HHHHHHHhccCCCC
Confidence 467788888876542 37776664 2 2234444444 35555432211 122222 444554432 1468
Q ss_pred EEEEEcCCC-ccChHHHHHHHHHHHhCCCeEEE
Q 010062 176 YVLFLDDDV-RLHPGTIGALTTEMEKNPEIFIQ 207 (519)
Q Consensus 176 ~vv~lDaD~-~~~pd~L~~lv~~l~~dp~vg~V 207 (519)
+++++++|. .++++.++++++.+.+ ++.+++
T Consensus 109 ~vlv~~gD~Pli~~~~i~~li~~~~~-~~~~~~ 140 (264)
T 3k8d_A 109 VIVNVQGDEPMIPATIIRQVADNLAQ-RQVGMA 140 (264)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHHHT-SSCSEE
T ss_pred EEEEEcCCcccCCHHHHHHHHHHHhh-cCCCEE
Confidence 999999999 5789999999999975 554433
No 26
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=92.20 E-value=1.5 Score=41.45 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=57.4
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhcc-C
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMH-K 172 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~-~ 172 (519)
+..+.+...++.+.+... -+++++.|+ +.+++...++ +++++...+.. ..|..+ +..+++... .
T Consensus 25 ~GkPli~~~l~~l~~~~~---~~ivVv~~~------~~i~~~~~~~----g~~v~~~~~~~-~~Gt~~-~~~~~~~l~~~ 89 (252)
T 3oam_A 25 GGKPMIQWVYEQAMQAGA---DRVIIATDD------ERVEQAVQAF----GGVVCMTSPNH-QSGTER-LAEVVAKMAIP 89 (252)
T ss_dssp TTEEHHHHHHHHHHHTTC---SEEEEEESC------HHHHHHHHHT----TCEEEECCTTC-CSHHHH-HHHHHHHTTCC
T ss_pred CCEEHHHHHHHHHHhCCC---CeEEEECCH------HHHHHHHHHc----CCEEEEcCCCC-CCcHHH-HHHHHHhcCcC
Confidence 345688899999887642 277777642 2344444443 35555532221 122333 344555442 1
Q ss_pred CCcEEEEEcCCC-ccChHHHHHHHHHHHh
Q 010062 173 DSKYVLFLDDDV-RLHPGTIGALTTEMEK 200 (519)
Q Consensus 173 ~gd~vv~lDaD~-~~~pd~L~~lv~~l~~ 200 (519)
+.|.++++++|. .++++.++++++.+.+
T Consensus 90 ~~d~vlv~~gD~Pli~~~~i~~l~~~~~~ 118 (252)
T 3oam_A 90 ADHIVVNVQGDEPLIPPAIIRQVADNLAA 118 (252)
T ss_dssp TTSEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCeeecCHHHHHHHHHHHHh
Confidence 368999999999 5789999999999875
No 27
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=90.46 E-value=2.7 Score=39.76 Aligned_cols=103 Identities=13% Similarity=0.101 Sum_probs=58.0
Q ss_pred CCcEEEEeeccCCchHHH---HHHHHHHhccCCCCeEEEEEECCC--CCcHHHHHHHHHhhcCCCCceEEEEcCCC----
Q 010062 83 LPRVTVVMPLKGFGEHNL---LNWRSQVTSLYGGPLEFLFVVESK--EDPAYHSVLRLLQEFKDDVDAKVVVAGLS---- 153 (519)
Q Consensus 83 ~P~VSVIIP~~ne~~~L~---~~L~Sl~~q~yp~~~eiIvV~d~s--~D~t~~i~~~l~~~~~~~~~v~vv~~~~~---- 153 (519)
+|.+=||-|+|....... +.-..| .+ -| ++--|||+|+. ++.+.+++++ .. +..+.+....+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL-~~-Vp-~L~WIVVEd~~~~t~~va~lL~~----sg--l~y~HL~~~~p~~~~ 72 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTL-LH-VP-NLHWLVVEDAPRRTPLTARLLRD----TG--LNYTHLHVETPRNYK 72 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHH-TT-SS-SEEEEEEESSSSCCHHHHHHHHH----HC--CEEEEEECCCCHHHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhh-cc-CC-ceEEEEEeCCCCCCHHHHHHHHH----cC--CceEEeecCCCcccc
Confidence 578899999999875333 333333 22 36 78888888854 3444444443 22 12222222211
Q ss_pred -------CCcchhHHHHHHHHHhcc-------CCCcEEEEEcCCCccChHHHHHH
Q 010062 154 -------TTCSQKIHNQLVGVENMH-------KDSKYVLFLDDDVRLHPGTIGAL 194 (519)
Q Consensus 154 -------~~~~~K~~nl~~gl~~a~-------~~gd~vv~lDaD~~~~pd~L~~l 194 (519)
........+-|.|++..+ ...-+|.|.|+|..++-+..++|
T Consensus 73 ~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~em 127 (253)
T 1v84_A 73 LRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM 127 (253)
T ss_dssp CC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHH
T ss_pred ccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHH
Confidence 001112344555665442 12469999999999999887774
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=90.12 E-value=4.5 Score=37.52 Aligned_cols=92 Identities=12% Similarity=0.091 Sum_probs=59.6
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+.+.... -+++++.++ + .+++...++ +++++.++.. ...+-.+ +..+++.. +
T Consensus 25 ~g~pli~~~i~~~~~~~~~--~~ivvv~~~--~----~i~~~~~~~----~~~~~~~~~~-~~~g~~~-~~~~~~~~--~ 88 (245)
T 1h7e_A 25 VGKPMIQHVYERALQVAGV--AEVWVATDD--P----RVEQAVQAF----GGKAIMTRND-HESGTDR-LVEVMHKV--E 88 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTC--CEEEEEESC--H----HHHHHHHHT----TCEEEECCSC-CSSHHHH-HHHHHHHS--C
T ss_pred CCchHHHHHHHHHHhCCCC--CeEEEECCc--H----HHHHHHHHc----CCeEEeCCCc-cCCcHHH-HHHHHHhC--C
Confidence 4567899999998876442 377777653 2 233434443 4666665322 1222333 34566666 4
Q ss_pred CcEEEEEcCCCc-cChHHHHHHHHHHHhC
Q 010062 174 SKYVLFLDDDVR-LHPGTIGALTTEMEKN 201 (519)
Q Consensus 174 gd~vv~lDaD~~-~~pd~L~~lv~~l~~d 201 (519)
.|.++++++|.. ++++.++++++.+.++
T Consensus 89 ~~~~lv~~~D~P~~~~~~i~~l~~~~~~~ 117 (245)
T 1h7e_A 89 ADIYINLQGDEPMIRPRDVETLLQGMRDD 117 (245)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHHHHC
T ss_pred CCEEEEEcCCcCcCCHHHHHHHHHHHHhC
Confidence 689999999996 6899999999988754
No 29
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=89.44 E-value=4.6 Score=37.76 Aligned_cols=98 Identities=10% Similarity=0.008 Sum_probs=61.7
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccC-
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHK- 172 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~- 172 (519)
+..+.+..+++++.+.... -++++|.+... .+.+++..+++.....+.++..+. +...++..|++....
T Consensus 30 ~Gkpll~~~l~~~~~~~~~--~~ivvv~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~sv~~al~~l~~~ 99 (246)
T 3f1c_A 30 NGKPIIVHTVEKFILNTRF--DKILISSPKEW---MNHAEDNIKKYISDDRIVVIEGGE-----DRNETIMNGIRFVEKT 99 (246)
T ss_dssp TTEEHHHHHHHHHHTCTTC--SEEEEEECGGG---HHHHHHHHHHHCCCTTEEEEECCS-----SHHHHHHHHHHHHHHH
T ss_pred CCeeHHHHHHHHHHcCCCC--CEEEEEeCHHH---HHHHHHHHHHhCCCCCEEEECCCC-----chHHHHHHHHHHHhhh
Confidence 4458899999999876433 26766665432 222333343332111466655322 234456666666531
Q ss_pred ----CCcEEEEEcCCC-ccChHHHHHHHHHHHhC
Q 010062 173 ----DSKYVLFLDDDV-RLHPGTIGALTTEMEKN 201 (519)
Q Consensus 173 ----~gd~vv~lDaD~-~~~pd~L~~lv~~l~~d 201 (519)
+.|++++.|+|. .++++.++++++.+.++
T Consensus 100 ~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~ 133 (246)
T 3f1c_A 100 YGLTDDDIIVTHDAVRPFLTHRIIEENIDAALET 133 (246)
T ss_dssp TCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred hcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhc
Confidence 258999999998 57999999999999863
No 30
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=88.62 E-value=3.5 Score=37.94 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=60.3
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCC--CCcchhHHHHHHHHHhcc
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLS--TTCSQKIHNQLVGVENMH 171 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~--~~~~~K~~nl~~gl~~a~ 171 (519)
+..+.+..+++.+.+...- -+++++.++ + .++++.+++ +++++..+.. .+..+...++..|++...
T Consensus 27 ~gkpll~~~l~~~~~~~~~--~~ivvv~~~--~----~i~~~~~~~----~~~~~~~~~~~~~~~~g~~~sv~~~l~~~~ 94 (228)
T 1ezi_A 27 NGISLLGHTINAAISSKCF--DRIIVSTDG--G----LIAEEAKNF----GVEVVLRPAELASDTASSISGVIHALETIG 94 (228)
T ss_dssp TTEEHHHHHHHHHHHHCCC--SEEEEEESC--H----HHHHHHHHT----TCEEEECCC------CHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHhCCCC--CEEEEECCC--H----HHHHHHHHc----CCEEEeCchHHcCCCCChHHHHHHHHHHhC
Confidence 3457889999998876432 277777642 1 123334443 3455544321 133345667777888763
Q ss_pred CCCcEEEEEcCCCc-cChHHHHHHHHHHHh
Q 010062 172 KDSKYVLFLDDDVR-LHPGTIGALTTEMEK 200 (519)
Q Consensus 172 ~~gd~vv~lDaD~~-~~pd~L~~lv~~l~~ 200 (519)
.+.|.++++++|.. ++++.++++++.+.+
T Consensus 95 ~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~ 124 (228)
T 1ezi_A 95 SNSGTVTLLQPTSPLRTGAHIREAFSLFDE 124 (228)
T ss_dssp CCSEEEEECCTTCTTCCHHHHHHHHTTCCT
T ss_pred CCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 23589999999985 689999999987754
No 31
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=87.59 E-value=7.9 Score=37.02 Aligned_cols=105 Identities=11% Similarity=0.032 Sum_probs=57.8
Q ss_pred CCCCcEEEEeeccCCchHHHHH---HHHHHhccCCCCeEEEEEECCC--CCcHHHHHHHHHhhcCCCCceEEEEcCCCCC
Q 010062 81 IKLPRVTVVMPLKGFGEHNLLN---WRSQVTSLYGGPLEFLFVVESK--EDPAYHSVLRLLQEFKDDVDAKVVVAGLSTT 155 (519)
Q Consensus 81 ~~~P~VSVIIP~~ne~~~L~~~---L~Sl~~q~yp~~~eiIvV~d~s--~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~ 155 (519)
...|.+=||-|+|.......+. -..| .+ -| ++--|||+|+. ++.+.+++++ .. +..+.+....+..
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~LtRLa~TL-~~-Vp-~L~WIVVEd~~~~t~~va~lL~r----sG--l~y~HL~~~~p~~ 88 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAELVRLSQTL-SL-VP-RLHWLLVEDAEGPTPLVSGLLAA----SG--LLFTHLVVLTPKA 88 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHHHHHHHHHH-TT-SS-SEEEEEEESSSSCCHHHHHHHHH----HC--SEEEEEECCCC--
T ss_pred CCCCeEEEEeCCCCCcchhHHHHHHHHHH-hc-CC-ceEEEEEcCCCCCCHHHHHHHHH----cC--CceEEeccCCCcc
Confidence 3478899999999987544432 2222 22 35 78888888754 3333444443 21 1222222221111
Q ss_pred c-----------chhHHHHHHHHHhcc--------C-------CCcEEEEEcCCCccChHHHHHH
Q 010062 156 C-----------SQKIHNQLVGVENMH--------K-------DSKYVLFLDDDVRLHPGTIGAL 194 (519)
Q Consensus 156 ~-----------~~K~~nl~~gl~~a~--------~-------~gd~vv~lDaD~~~~pd~L~~l 194 (519)
. .....+.|.|++..+ . ..-+|.|.|+|..++-+..++|
T Consensus 89 ~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdem 153 (281)
T 3cu0_A 89 QRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEM 153 (281)
T ss_dssp ---------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHH
T ss_pred ccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHh
Confidence 1 012455666776554 1 1368999999999999887774
No 32
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=87.10 E-value=9.3 Score=35.51 Aligned_cols=102 Identities=11% Similarity=0.082 Sum_probs=64.1
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+.+.... -++++|.+... .+.++++... .++++..+. .....+..|++.....
T Consensus 33 ~Gkpll~~~l~~~~~~~~~--~~ivVv~~~~~---~~~~~~~~~~-----~v~~v~gg~-----~r~~sv~~gl~~~~~~ 97 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGVV--DTVVVAVPADR---TDEARQILGH-----RAMIVAGGS-----NRTDTVNLALTVLSGT 97 (231)
T ss_dssp TTEEHHHHHHHHHHHTSCC--CEEEEEECGGG---HHHHHHHHGG-----GCEEEECCS-----SHHHHHHHHHGGGC--
T ss_pred CCeEHHHHHHHHHHhCCCC--CeEEEECChHH---HHHHHHHhcC-----CeEEEcCCC-----chHHHHHHHHHHhhhc
Confidence 5667899999998765432 36777765433 2233343332 355554322 1346677888877422
Q ss_pred --CcEEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEecc
Q 010062 174 --SKYVLFLDDDVR-LHPGTIGALTTEMEKNPEIFIQTGYP 211 (519)
Q Consensus 174 --gd~vv~lDaD~~-~~pd~L~~lv~~l~~dp~vg~V~g~~ 211 (519)
.|++++.|+|.- ++++.|+++++.+.++.+ +++.+.+
T Consensus 98 ~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~~~~-~~i~~~p 137 (231)
T 3q80_A 98 AEPEFVLVHDAARALTPPALVARVVEALRDGYA-AVVPVLP 137 (231)
T ss_dssp -CCSEEEECCTTCTTCCHHHHHHHHHHHHTTCS-EEEEEEC
T ss_pred CCCCEEEEEcCCcCCCCHHHHHHHHHHHhhcCC-eEEEEEe
Confidence 589999999975 699999999999875233 3344433
No 33
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=86.76 E-value=5.3 Score=37.60 Aligned_cols=105 Identities=12% Similarity=0.138 Sum_probs=56.4
Q ss_pred CCcEEEEeeccCCchHHHH---HHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCC-----
Q 010062 83 LPRVTVVMPLKGFGEHNLL---NWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLST----- 154 (519)
Q Consensus 83 ~P~VSVIIP~~ne~~~L~~---~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~----- 154 (519)
+|.+=||-|+|.......+ .-..|. + -| ++--|||+|+..- + +.+.++.++..- .-+.+....+.
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~-~-Vp-~l~WIVVEd~~~~-~-~~v~~lL~~sgl--~y~HL~~~~~~~~~~~ 74 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFR-Q-VA-QLHWILVEDAAAR-S-ELVSRFLARAGL--PSTHLHVPTPRRYKRP 74 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHT-T-ST-TEEEEEEESSSSC-C-HHHHHHHHHSCS--CEEEEECCCCCC----
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHh-c-CC-ceEEEEEcCCCCC-C-HHHHHHHHHcCC--ceEEEecCCccccCCC
Confidence 5788899999998754433 222222 2 35 5777777775532 2 223344444321 22333222110
Q ss_pred CcchhHHHHHHHHHhcc-------CCCcEEEEEcCCCccChHHHHHH
Q 010062 155 TCSQKIHNQLVGVENMH-------KDSKYVLFLDDDVRLHPGTIGAL 194 (519)
Q Consensus 155 ~~~~K~~nl~~gl~~a~-------~~gd~vv~lDaD~~~~pd~L~~l 194 (519)
+......+-|.|++..+ ...-+|.|.|+|..++-+..++|
T Consensus 75 ~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~em 121 (246)
T 2d0j_A 75 GLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEM 121 (246)
T ss_dssp CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHH
Confidence 10111334445554321 01369999999999999887774
No 34
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=86.18 E-value=6.4 Score=34.88 Aligned_cols=93 Identities=10% Similarity=0.032 Sum_probs=58.1
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+..... -++++|.+... +.+++...++ +++++..+.. ..|-..++..|++....+
T Consensus 29 ~g~pll~~~l~~l~~~~~---~~i~vv~~~~~----~~~~~~~~~~----~~~~~~~~~~--~~g~~~~i~~al~~~~~~ 95 (197)
T 2wee_A 29 RDTTVLGATLDVARQAGF---DQLILTLGGAA----SAVRAAMALD----GTDVVVVEDV--ERGCAASLRVALARVHPR 95 (197)
T ss_dssp TTEEHHHHHHHHHHHTTC---SEEEEEECTTH----HHHHHHSCCT----TSEEEECC------CCHHHHHHHHTTSCTT
T ss_pred CCccHHHHHHHHHHhcCC---CcEEEEeCCCH----HHHHHHhccC----CCEEEECCCc--ccCHHHHHHHHHHHhccc
Confidence 455789999999877542 26666665432 1233322221 4666664321 123456677788766323
Q ss_pred CcEEEEEcCCC-ccChHHHHHHHHHHHh
Q 010062 174 SKYVLFLDDDV-RLHPGTIGALTTEMEK 200 (519)
Q Consensus 174 gd~vv~lDaD~-~~~pd~L~~lv~~l~~ 200 (519)
.|.++++++|. .++++.++++++. +.
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~-~~ 122 (197)
T 2wee_A 96 ATGIVLMLGDQPQVAPATLRRIIDV-GP 122 (197)
T ss_dssp EEEEEEEETTCTTCCHHHHHHHHHH-GG
T ss_pred CCeEEEEeCCcCCCCHHHHHHHHhh-cC
Confidence 58999999999 5789999999988 53
No 35
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=85.74 E-value=6.9 Score=36.82 Aligned_cols=95 Identities=13% Similarity=0.154 Sum_probs=56.9
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHh
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVEN 169 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~ 169 (519)
+|+ +..+.+..+++.+.+... -+++++.+. +. +++...++ +++++.++... ..+.. .+..+++.
T Consensus 22 ~~~-~gkpli~~~l~~l~~~~~---~~ivvv~~~--~~----i~~~~~~~----~~~~~~~~~~~-~~g~~-~~~~~~~~ 85 (262)
T 1vic_A 22 ADI-KGKPMIQHVFEKALQSGA---SRVIIATDN--EN----VADVAKSF----GAEVCMTSVNH-NSGTE-RLAEVVEK 85 (262)
T ss_dssp CEE-TTEEHHHHHHHHHHHTTC---SEEEEEESC--HH----HHHHHHHT----TCEEEECCCSS-CCHHH-HHHHHHHH
T ss_pred ccC-CCeEHHHHHHHHHHhCCC---ceEEEECCc--HH----HHHHHHhc----CCEEEECCccc-cCChH-HHHHHHHH
Confidence 344 455889999999987643 377777653 21 33334443 45666543211 12222 23333333
Q ss_pred cc-CCCcEEEEEcCCC-ccChHHHHHHHHHHHh
Q 010062 170 MH-KDSKYVLFLDDDV-RLHPGTIGALTTEMEK 200 (519)
Q Consensus 170 a~-~~gd~vv~lDaD~-~~~pd~L~~lv~~l~~ 200 (519)
.. .+.|.++++++|. .++++.++++++.+.+
T Consensus 86 l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 118 (262)
T 1vic_A 86 LAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAK 118 (262)
T ss_dssp TTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHH
T ss_pred hccCCCCEEEEEeCCcCccCHHHHHHHHHHHHh
Confidence 21 1358999999999 4789999999998864
No 36
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=85.72 E-value=7 Score=35.84 Aligned_cols=94 Identities=14% Similarity=0.081 Sum_probs=58.1
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHh
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVEN 169 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~ 169 (519)
+|+ +..+.+..+++.+.+. .. +++++.++ + .+++...++ ++++..... ...+..+.+ .+++.
T Consensus 22 ~~i-~g~pli~~~l~~~~~~-~~---~i~v~~~~--~----~i~~~~~~~-----~~~~~~~~~-~~~g~~~~~-~~~~~ 83 (234)
T 2y6p_A 22 KNL-LGKPLIRWVVEGLVKT-GE---RVILATDS--E----RVKEVVEDL-----CEVFLTPSD-LPSGSDRVL-YVVRD 83 (234)
T ss_dssp CEE-TTEEHHHHHHHHHHTT-TS---CEEEEESC--H----HHHHHHTTT-----SEEEECCTT-CCSHHHHHH-HHHTT
T ss_pred eeE-CCEEHHHHHHHHHHHh-CC---EEEEECCh--H----HHHHHHHhc-----eEEEECCcc-cccchHHHH-HHHHh
Confidence 344 3458899999998876 32 56666543 1 233333332 344444322 122333333 46665
Q ss_pred ccCCCcEEEEEcCCC-ccChHHHHHHHHHHHhCCC
Q 010062 170 MHKDSKYVLFLDDDV-RLHPGTIGALTTEMEKNPE 203 (519)
Q Consensus 170 a~~~gd~vv~lDaD~-~~~pd~L~~lv~~l~~dp~ 203 (519)
. +.|.++++++|. .++++.++++++.+.++..
T Consensus 84 ~--~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 116 (234)
T 2y6p_A 84 L--DVDLIINYQGDEPFVYEEDIKLIFRELEKGER 116 (234)
T ss_dssp C--CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCS
T ss_pred C--CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCC
Confidence 5 468999999999 7888999999998865443
No 37
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=85.45 E-value=2.7 Score=38.61 Aligned_cols=98 Identities=11% Similarity=0.093 Sum_probs=59.9
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHh
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVEN 169 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~ 169 (519)
+|+ +..+.+..+++.+.+...- -++++|.+... .++.+.+..++. .+++++.. + .+...++..+++.
T Consensus 27 ~~i-~g~pli~~~l~~l~~~~~~--~~ivvv~~~~~---~~~~~~~~~~~~--~~v~~~~~----~-~~~~~sv~~al~~ 93 (228)
T 2yc3_A 27 IPL-LGQPIALYSFFTFSRMPEV--KEIVVVCDPFF---RDIFEEYEESID--VDLSFAIP----G-KERQDSVYSGLQE 93 (228)
T ss_dssp SEE-TTEEHHHHHHHHHHHCTTE--EEEEEECCGGG---HHHHHTTTTTSS--SEEEEECC----C-SSHHHHHHHHHTT
T ss_pred eEE-CCEEHHHHHHHHHHcCCCC--CeEEEEEChHH---HHHHHHHHHhCC--CcEEEECC----C-CCHHHHHHHHHHh
Confidence 344 4457888899988765221 35666554322 223333333322 13444432 1 2345677778877
Q ss_pred ccCCCcEEEEEcCCC-ccChHHHHHHHHHHHh
Q 010062 170 MHKDSKYVLFLDDDV-RLHPGTIGALTTEMEK 200 (519)
Q Consensus 170 a~~~gd~vv~lDaD~-~~~pd~L~~lv~~l~~ 200 (519)
...+.++++++|+|. .++++.++++++.+.+
T Consensus 94 ~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~ 125 (228)
T 2yc3_A 94 IDVNSELVCIHDSARPLVNTEDVEKVLKDGSA 125 (228)
T ss_dssp SCTTCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEecCCCccCCHHHHHHHHHHHHh
Confidence 643358999999997 6789999999998865
No 38
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=85.38 E-value=4.3 Score=37.13 Aligned_cols=86 Identities=14% Similarity=0.096 Sum_probs=58.7
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+... ++++|.++ + +..+++...+ +++++.... .+. |-...+..|++.+
T Consensus 24 ~G~pli~~~~~~l~~~------~vvvv~~~---~--~~~~~~~~~~----~~~~v~d~~-~~~-G~~~si~~gl~~~--- 83 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF------QTVFVCRD---E--KQAEKLSSRY----EAEFIWDLH-KGV-GSIAGIHAALRHF--- 83 (208)
T ss_dssp TTEEHHHHHHHHHTTS------EEEEECSS---H--HHHHHHHTTS----CSCEECCTT-CCC-SHHHHHHHHHHHH---
T ss_pred CCeeHHHHHHHHhcCC------CEEEEECC---H--HHHHHHHHhc----CCeEEecCC-CCC-ChHHHHHHHHHHc---
Confidence 6678899999988654 77777642 1 2234444333 455655432 232 4566778888877
Q ss_pred CcEEEEEcCCCc-cChHHHHHHHHHHHh
Q 010062 174 SKYVLFLDDDVR-LHPGTIGALTTEMEK 200 (519)
Q Consensus 174 gd~vv~lDaD~~-~~pd~L~~lv~~l~~ 200 (519)
.|++ ++++|.- ++++.++++++.+++
T Consensus 84 ~~~v-v~~~D~P~i~~~~i~~l~~~~~~ 110 (208)
T 3ngw_A 84 GSCV-VAAIDMPFVKPEVLEHLYKEGEK 110 (208)
T ss_dssp SSEE-EEETTCTTCCHHHHHHHHHHHHH
T ss_pred CCCE-EEECCccCCCHHHHHHHHHHhhc
Confidence 4899 9999994 699999999999874
No 39
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=85.00 E-value=5.9 Score=41.37 Aligned_cols=106 Identities=15% Similarity=0.126 Sum_probs=67.6
Q ss_pred CcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHH
Q 010062 84 PRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQ 163 (519)
Q Consensus 84 P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl 163 (519)
|++ ++|+.|. +-|...|+.+.+... -|+++|.....|.-.+.+.+...++.. +++++....+.| -++++
T Consensus 31 pK~--l~pv~gk-p~i~~~l~~~~~~g~---~~i~vv~~~~~~~i~~~~~~~~~~~~~--~i~~~~q~~~lG---Ta~Av 99 (501)
T 3st8_A 31 PKV--LHTLAGR-SMLSHVLHAIAKLAP---QRLIVVLGHDHQRIAPLVGELADTLGR--TIDVALQDRPLG---TGHAV 99 (501)
T ss_dssp CGG--GCEETTE-EHHHHHHHHHHHHCC---SEEEEEECTTHHHHHHHHHHHHHHHTS--CCEEEECSSCCC---HHHHH
T ss_pred CHH--HeEECCh-hHHHHHHHHHHhCCC---CEEEEEeCCCHHHHHHHHHHHHHhcCC--cEEEEEcCCCCC---cHHHH
Confidence 544 6788776 588888888877643 378777765443333333333334432 688887766654 45677
Q ss_pred HHHHHhccC--CCcEEEEEcCCCccChHHHHHHHHHHHh
Q 010062 164 LVGVENMHK--DSKYVLFLDDDVRLHPGTIGALTTEMEK 200 (519)
Q Consensus 164 ~~gl~~a~~--~gd~vv~lDaD~~~~pd~L~~lv~~l~~ 200 (519)
..+.+.... .++++++..++....++.+..|++...+
T Consensus 100 ~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~ 138 (501)
T 3st8_A 100 LCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRA 138 (501)
T ss_dssp HHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhh
Confidence 777776532 1345555555557889999999987765
No 40
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=82.88 E-value=4.1 Score=36.21 Aligned_cols=93 Identities=6% Similarity=0.024 Sum_probs=58.0
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+..... -++++|.+... +.+++...++ +++++..... ..+-..++..|++....+
T Consensus 29 ~g~pli~~~l~~l~~~~~---~~i~vv~~~~~----~~~~~~~~~~----~~~~~~~~~~--~~g~~~~i~~al~~~~~~ 95 (199)
T 2waw_A 29 GDTTLLGATLAMARRCPF---DQLIVTLGGAA----DEVLEKVELD----GLDIVLVDDA--GLGCSSSLKSALTWVDPT 95 (199)
T ss_dssp TTEEHHHHHHHHHHTSSC---SEEEEEECTTH----HHHHHHSCCT----TSEEEECCCC--CTTCCCHHHHHHHTSCTT
T ss_pred CccCHHHHHHHHHHhCCC---CcEEEEeCCCH----HHHHHHhccC----CCEEEECCCc--ccCHHHHHHHHHHhhhcc
Confidence 445789999999877642 26666665432 1233333222 4566654321 122234566777766323
Q ss_pred CcEEEEEcCCCc-cChHHHHHHHHHHHh
Q 010062 174 SKYVLFLDDDVR-LHPGTIGALTTEMEK 200 (519)
Q Consensus 174 gd~vv~lDaD~~-~~pd~L~~lv~~l~~ 200 (519)
.|.++++++|.. ++++.++++++. +.
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~-~~ 122 (199)
T 2waw_A 96 AEGIVLMLGDQPGITASAVASLIAG-GR 122 (199)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHH-HT
T ss_pred CCeEEEEeCCcccCCHHHHHHHHhh-cC
Confidence 589999999997 589999999988 53
No 41
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=79.06 E-value=16 Score=33.19 Aligned_cols=95 Identities=12% Similarity=-0.018 Sum_probs=58.4
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccC-
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHK- 172 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~- 172 (519)
+..+.+..+++.+.+.... -++++|.+...+.. +++. ++... .++++ .+ + .+...++..|++....
T Consensus 32 ~gkpli~~~l~~l~~~~~~--~~ivvv~~~~~~~~----~~~~-~~~~~-~i~~~-~~---~-~~~~~si~~~l~~~~~~ 98 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAV--DLTVVVVSPEDTFA----DKVQ-TAFPQ-VRVWK-NG---G-QTRAETVRNGVAKLLET 98 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTC--CEEEEECCTTCSTH----HHHH-HHCTT-SEEEC-CC---C-SSHHHHHHHHHHHHHHH
T ss_pred CCeEHHHHHHHHHHcCCCC--CeEEEEECccHHHH----HHHH-hcCCC-ceEEE-cC---C-CcHHHHHHHHHHHHhhh
Confidence 4667899999998865432 26666665433322 2222 22211 45543 21 1 2345666677765521
Q ss_pred ----CCcEEEEEcCCC-ccChHHHHHHHHHHHhC
Q 010062 173 ----DSKYVLFLDDDV-RLHPGTIGALTTEMEKN 201 (519)
Q Consensus 173 ----~gd~vv~lDaD~-~~~pd~L~~lv~~l~~d 201 (519)
+.|.++++++|. .++++.++++++.+.++
T Consensus 99 ~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~ 132 (231)
T 1vgw_A 99 GLAAETDNILVHDAARCCLPSEALARLIEQAGNA 132 (231)
T ss_dssp SSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTC
T ss_pred ccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 358999999997 46899999999988653
No 42
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=76.91 E-value=19 Score=32.80 Aligned_cols=100 Identities=10% Similarity=-0.012 Sum_probs=59.3
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCC--CCceEEEEcCCCCCcchhHHHHHHHH
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKD--DVDAKVVVAGLSTTCSQKIHNQLVGV 167 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~--~~~v~vv~~~~~~~~~~K~~nl~~gl 167 (519)
+|+ +..+.+..+++.+.+.... -+++++.+... .+.++++..+++. .........+ .+...++..|+
T Consensus 26 ~~i-~g~pli~~~l~~l~~~~~~--~~i~vv~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~l 94 (236)
T 2vsh_A 26 LEL-GDRPILIHTIEKFVLEPSI--EKIVVGVHGDW---VSHAEDLVDKYLPLYKERIIITKGG-----ADRNTSIKNII 94 (236)
T ss_dssp SEE-TTEEHHHHHHHHHHTCTTC--CCEEEEECGGG---HHHHHHHHHHHCGGGGGGEEEEECC-----SSHHHHHHHHH
T ss_pred eee-CCccHHHHHHHHHHcCCCC--CeEEEEeCHHH---HHHHHHHHHhccccccCceEEECCC-----CchHHHHHHHH
Confidence 344 4558899999998875322 26666665433 1223333333320 0022322211 23455666677
Q ss_pred Hhcc---C--CCcEEEEEcCCC-ccChHHHHHHHHHHHh
Q 010062 168 ENMH---K--DSKYVLFLDDDV-RLHPGTIGALTTEMEK 200 (519)
Q Consensus 168 ~~a~---~--~gd~vv~lDaD~-~~~pd~L~~lv~~l~~ 200 (519)
+... . +.|+++++++|. .++++.++++++.+.+
T Consensus 95 ~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~ 133 (236)
T 2vsh_A 95 EAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQN 133 (236)
T ss_dssp HHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred HHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHh
Confidence 6652 1 248999999999 6799999999998875
No 43
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=75.42 E-value=2.6 Score=38.04 Aligned_cols=86 Identities=14% Similarity=0.092 Sum_probs=55.3
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+... ++++|.+... +.+++. .+. ++ ++.++.. ..|-..++..|++... +
T Consensus 26 ~g~pll~~~l~~l~~~------~ivvv~~~~~----~~~~~~---~~~--~~-~v~~~~~--~~G~~~si~~al~~~~-~ 86 (197)
T 3d5n_A 26 DNTPIIMRTIRIYGDL------EKIIIVGKYV----NEMLPL---LMD--QI-VIYNPFW--NEGISTSLKLGLRFFK-D 86 (197)
T ss_dssp SSSBHHHHHHHHTTTS------BCCEEECTTH----HHHGGG---CTT--SC-EEECTTG--GGCHHHHHHHHHHHTT-T
T ss_pred CceEHHHHHHHHHHhC------CEEEEECCCH----HHHHHH---hcC--CE-EEECCCC--CCCHHHHHHHHHHhhc-c
Confidence 4457888888887654 6666665432 222222 221 46 5554322 1234567778888773 2
Q ss_pred CcEEEEEcCCC-ccChHHHHHHHHHH
Q 010062 174 SKYVLFLDDDV-RLHPGTIGALTTEM 198 (519)
Q Consensus 174 gd~vv~lDaD~-~~~pd~L~~lv~~l 198 (519)
.|.++++++|. .++++.++++++.+
T Consensus 87 ~~~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 87 YDAVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp SSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred CCcEEEEeCCccccCHHHHHHHHHHh
Confidence 48999999999 57999999999877
No 44
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=75.04 E-value=7.3 Score=40.03 Aligned_cols=96 Identities=14% Similarity=0.010 Sum_probs=61.1
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHH
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVE 168 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~ 168 (519)
++|+.| .+.+..+++.+.+... -+++++.+... +.+++ .... +++++..+... +-..++..+++
T Consensus 33 l~~i~g-kpli~~~l~~l~~~g~---~~iivv~~~~~----~~i~~---~~~~--~i~~v~~~~~~---G~~~sl~~a~~ 96 (468)
T 1hm9_A 33 LHKVAG-ISMLEHVFRSVGAIQP---EKTVTVVGHKA----ELVEE---VLAG--QTEFVTQSEQL---GTGHAVMMTEP 96 (468)
T ss_dssp GSEETT-EEHHHHHHHHHHTTCC---SEEEEEECTTH----HHHHH---SSSS--SSEEEECSSCC---CHHHHHHTTHH
T ss_pred eeEECC-ccHHHHHHHHHHhcCC---CCEEEEECCCH----HHHHH---HhCC--CcEEEeCCccC---ChHHHHHHHHH
Confidence 345544 4889999999887642 36766665431 12222 2221 46666644322 34566666777
Q ss_pred hccCCCcEEEEEcCCCc-cChHHHHHHHHHHHh
Q 010062 169 NMHKDSKYVLFLDDDVR-LHPGTIGALTTEMEK 200 (519)
Q Consensus 169 ~a~~~gd~vv~lDaD~~-~~pd~L~~lv~~l~~ 200 (519)
....+.|.++++++|.. +.++.++++++.+.+
T Consensus 97 ~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 129 (468)
T 1hm9_A 97 ILEGLSGHTLVIAGDTPLITGESLKNLIDFHIN 129 (468)
T ss_dssp HHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred HhccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 66322589999999996 788999999998865
No 45
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=74.77 E-value=40 Score=30.21 Aligned_cols=92 Identities=15% Similarity=0.136 Sum_probs=58.8
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+.+.... -+++++.+... .+.+++... .. +++++..+. +....+..|++... +
T Consensus 28 ~g~pli~~~l~~l~~~~~~--~~i~vv~~~~~---~~~~~~~~~---~~-~v~~~~~~~-----~~~~~i~~al~~~~-~ 92 (223)
T 2xwl_A 28 GGTPLLEHALSGLRASGVI--DRIVIAVPPAL---TDESKLVFG---GE-DSVIVSGGV-----DRTESVALALEAAG-D 92 (223)
T ss_dssp TTEEHHHHHHHHHHHHSCC--SEEEEEECGGG---HHHHHHHTC---BT-TEEEEECCS-----SHHHHHHHHHTTCT-T
T ss_pred CCeEHHHHHHHHHhcCCCC--CeEEEEEcccH---HHHHHHHhc---cC-CeEEEcCCC-----CHHHHHHHHHHhcC-C
Confidence 3567889999998876432 26666665432 222333221 11 566654321 13556777777662 3
Q ss_pred CcEEEEEcCCC-ccChHHHHHHHHHH-Hh
Q 010062 174 SKYVLFLDDDV-RLHPGTIGALTTEM-EK 200 (519)
Q Consensus 174 gd~vv~lDaD~-~~~pd~L~~lv~~l-~~ 200 (519)
.|+++++++|. .++++.++++++.+ ++
T Consensus 93 ~~~vlv~~~D~P~~~~~~i~~l~~~~~~~ 121 (223)
T 2xwl_A 93 AEFVLVHDAARALTPPALIARVVAALKEG 121 (223)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCcccCCHHHHHHHHHHHhhc
Confidence 58999999999 57899999999988 53
No 46
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=73.22 E-value=26 Score=31.89 Aligned_cols=94 Identities=12% Similarity=0.024 Sum_probs=57.0
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccC-
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHK- 172 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~- 172 (519)
+..+.+..+++.+.+.... -++++|.+... .+.+++... +. . ++.... +.......+..|++.+..
T Consensus 39 ~Gkpli~~~i~~l~~~~~~--~~ivVv~~~~~---~~~~~~~~~-~~-~-~~~~~~-----gg~~~~~sv~~al~~~~~~ 105 (234)
T 1vpa_A 39 EGRMLFEYPLSTFLKSEAI--DGVVIVTRREW---FEVVEKRVF-HE-K-VLGIVE-----GGDTRSQSVRSALEFLEKF 105 (234)
T ss_dssp TTEETTHHHHHHHHHCTTC--SEEEEEECGGG---HHHHHTTCC-CT-T-EEEEEE-----CCSSHHHHHHHHHHHHGGG
T ss_pred CCeEHHHHHHHHHHcCCCC--CeEEEEEChHH---HHHHHHHhc-cC-C-ceEEeC-----CCCcHHHHHHHHHHHhhhc
Confidence 4567888999998776433 27777765432 122222221 21 1 232221 111244556667776532
Q ss_pred CCcEEEEEcCCC-ccChHHHHHHHHHHHh
Q 010062 173 DSKYVLFLDDDV-RLHPGTIGALTTEMEK 200 (519)
Q Consensus 173 ~gd~vv~lDaD~-~~~pd~L~~lv~~l~~ 200 (519)
+.|+++++++|. .++++.++++++.+.+
T Consensus 106 ~~~~vlv~~~D~Pli~~~~i~~l~~~~~~ 134 (234)
T 1vpa_A 106 SPSYVLVHDSARPFLRKKHVSEVLRRARE 134 (234)
T ss_dssp CCSEEEEEETTSCCCCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCcccCCCHHHHHHHHHHHHh
Confidence 358999999999 5799999999998865
No 47
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=73.11 E-value=16 Score=33.56 Aligned_cols=93 Identities=16% Similarity=0.173 Sum_probs=59.1
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+.+.... -++++|.+...+.-.+ ...++.. .++++..+ .+...++..|++... +
T Consensus 33 ~g~pll~~~i~~l~~~~~~--~~ivvv~~~~~~~~~~-----~~~~~~~-~v~~~~~~-----~g~~~~i~~al~~~~-~ 98 (236)
T 1i52_A 33 GNQTILEHSVHALLAHPRV--KRVVIAISPGDSRFAQ-----LPLANHP-QITVVDGG-----DERADSVLAGLKAAG-D 98 (236)
T ss_dssp TTEEHHHHHHHHHHTSTTE--EEEEEEECTTCCSGGG-----SGGGGCT-TEEEEECC-----SSHHHHHHHHHHTST-T
T ss_pred CCEEHHHHHHHHHHhCCCC--CeEEEEeCccHHHHHH-----HHhcCCC-CEEEECCC-----CCHHHHHHHHHHhcC-C
Confidence 4567888999988765322 3666666654433211 1222211 45554321 135566777888763 3
Q ss_pred CcEEEEEcCCCc-cChHHHHHHHHHHHh
Q 010062 174 SKYVLFLDDDVR-LHPGTIGALTTEMEK 200 (519)
Q Consensus 174 gd~vv~lDaD~~-~~pd~L~~lv~~l~~ 200 (519)
.|.++++++|.. ++++.++++++.+.+
T Consensus 99 ~~~~lv~~~D~P~~~~~~i~~l~~~~~~ 126 (236)
T 1i52_A 99 AQWVLVHDAARPCLHQDDLARLLALSET 126 (236)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHGGGGT
T ss_pred CCEEEEEcCccccCCHHHHHHHHHHHHh
Confidence 589999999985 689999999998765
No 48
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=73.01 E-value=9.4 Score=36.23 Aligned_cols=98 Identities=10% Similarity=0.001 Sum_probs=61.0
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhc-----------------------CCCCce
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEF-----------------------KDDVDA 145 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~-----------------------~~~~~v 145 (519)
++|+-|. +.|...++++.+... -++++|..... +.+++...+. .+ .++
T Consensus 27 ll~i~gk-pli~~~l~~l~~~gi---~~i~vv~~~~~----~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~i 97 (281)
T 3juk_A 27 MLPIVDK-PLIQYAVEEAMEAGC---EVMAIVTGRNK----RSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEK-CCF 97 (281)
T ss_dssp GCBSSSS-BHHHHHHHHHHHHTC---CEEEEEECTTH----HHHHHHTSCCC--------CCHHHHHHHHHHHHHH-CEE
T ss_pred cceECCE-EHHHHHHHHHHhCCC---CEEEEEecCCH----HHHHHHHhcchhhhhhhhcccchhhhhhhhccccC-ccE
Confidence 3566666 889999999988643 37777765322 1222222111 11 134
Q ss_pred EEEEcCCCCCcchhHHHHHHHHHhccCCCcEEEEEcCCCccChH----HHHHHHHHHHh
Q 010062 146 KVVVAGLSTTCSQKIHNQLVGVENMHKDSKYVLFLDDDVRLHPG----TIGALTTEMEK 200 (519)
Q Consensus 146 ~vv~~~~~~~~~~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd----~L~~lv~~l~~ 200 (519)
.++..+.. .|-..++..+.+.. ..|.++++.+|...+++ .+.++++.+.+
T Consensus 98 ~~~~~~~~---~Gt~~al~~a~~~l--~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~ 151 (281)
T 3juk_A 98 SYVRQKQM---KGLGHAILTGEALI--GNEPFAVILADDLCISHDHPSVLKQMTSLYQK 151 (281)
T ss_dssp EEEECSSC---CCHHHHHHHTHHHH--CSSCEEEECTTEEEECTTSCCHHHHHHHHHHH
T ss_pred EEEecCCC---CCcHHHHHHHHHHc--CCCCEEEEeCCeeccCccchHHHHHHHHHHHH
Confidence 44443332 23456777777776 34678889999988888 89999998765
No 49
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=71.23 E-value=55 Score=31.34 Aligned_cols=97 Identities=12% Similarity=0.158 Sum_probs=59.7
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhh-cCCCCceEEEEcCCCCCcchhHHHHHHHH
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQE-FKDDVDAKVVVAGLSTTCSQKIHNQLVGV 167 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~-~~~~~~v~vv~~~~~~~~~~K~~nl~~gl 167 (519)
++|+.+..+.|..+++.+.+. .. +++++.+... .+.+++...+ +... ++.++..+... +-..++..+.
T Consensus 30 ll~i~gg~pli~~~l~~l~~~-~~---~i~vv~~~~~---~~~i~~~~~~~~~~~-~~~~i~~~~~~---gt~~al~~a~ 98 (308)
T 2qh5_A 30 FLKLFDHKSLFELSFKRNASL-VD---ETLIVCNEKH---YFLALEEIKNEIKNK-SVGFLLESLSK---NTANAIALSA 98 (308)
T ss_dssp GCTTBTTBCHHHHHHHHHHTT-CS---EEEEEEEGGG---HHHHHHHTTTTCSSC-EEEEEEESSCC---CHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHcc-CC---CEEEEEChhH---HHHHHHHHHHhhCCC-ccEEEeCCCCC---ChHHHHHHHH
Confidence 456656678899999998876 32 6666655421 2233333333 2111 34555544333 3456666666
Q ss_pred HhccCCCcEEEEEcCCCcc-ChHHHHHHHHH
Q 010062 168 ENMHKDSKYVLFLDDDVRL-HPGTIGALTTE 197 (519)
Q Consensus 168 ~~a~~~gd~vv~lDaD~~~-~pd~L~~lv~~ 197 (519)
.... ..++++++.+|... +++.+.++++.
T Consensus 99 ~~l~-~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 99 LMSD-KEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp HTSC-TTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HHhC-CCCeEEEEcCCccccCHHHHHHHHHH
Confidence 6652 24688999999987 78889998876
No 50
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=70.12 E-value=37 Score=32.60 Aligned_cols=104 Identities=11% Similarity=0.148 Sum_probs=60.6
Q ss_pred Eeecc-CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCC------------CC
Q 010062 89 VMPLK-GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLS------------TT 155 (519)
Q Consensus 89 IIP~~-ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~------------~~ 155 (519)
++|+- +..+.|..+++.+.+... -++++|...... ..+.+.+....+...+++.+..+.. ..
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~~~---~~i~vv~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 99 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRAGF---GRLVFVIRHSFE--KEFREKILTKYEGRIPVELVFQELDRLPEGFSCPEGREK 99 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHHTC---CEEEEEECGGGH--HHHHHHTHHHHTTTSCEEEEECCTTCCCTTCCCCTTCCS
T ss_pred EeEcCCCCeeHHHHHHHHHHHCCC---CeEEEEcCchHH--HHHHHHHHHHhccCCcEEEEecccccccccccccccccc
Confidence 46663 455889999998877643 377777764321 1222223222222125666655410 01
Q ss_pred cchhHHHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHh
Q 010062 156 CSQKIHNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEK 200 (519)
Q Consensus 156 ~~~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~ 200 (519)
..|-.+++..+.+.. +.++ +++.+|...+++.++++++...+
T Consensus 100 ~~Gt~~al~~a~~~i--~~~~-lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 100 PWGTNHAVLMGRDAI--REPF-AVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp CCCHHHHHHTTTTTC--CSCE-EEEESSCBCCHHHHHHHHHHHHT
T ss_pred cCCcHHHHHHHHHhc--CCCE-EEEECCeecCHHHHHHHHHHHHH
Confidence 234456666555555 3455 56679999999999999998863
No 51
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=70.01 E-value=12 Score=38.05 Aligned_cols=100 Identities=14% Similarity=0.037 Sum_probs=62.2
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHh
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVEN 169 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~ 169 (519)
+|+ +..+.+..+++.+.+... -+++++..... +.+++...+. +++++..+... +-..++..+++.
T Consensus 31 ~~i-~g~pli~~~l~~l~~~~~---~~i~vv~~~~~----~~i~~~~~~~----~~~~v~~~~~~---g~~~~i~~~~~~ 95 (459)
T 4fce_A 31 HPL-AGKPMVQHVIDAAMKLGA---QHVHLVYGHGG----ELLKKTLADP----SLNWVLQAEQL---GTGHAMQQAAPH 95 (459)
T ss_dssp SEE-TTEEHHHHHHHHHHHHTC---SCEEEEESSCH----HHHHHHC---------CEEECSSCC---CHHHHHHHHGGG
T ss_pred Cee-CCeeHHHHHHHHHHhCCC---CcEEEEeCCCH----HHHHHHhccC----CcEEEeCCCCC---CcHHHHHHHHHh
Confidence 344 445789999999887652 26666665432 2233332221 45666543332 345677778877
Q ss_pred ccCCCcEEEEEcCCC-ccChHHHHHHHHHHHhCCCeEE
Q 010062 170 MHKDSKYVLFLDDDV-RLHPGTIGALTTEMEKNPEIFI 206 (519)
Q Consensus 170 a~~~gd~vv~lDaD~-~~~pd~L~~lv~~l~~dp~vg~ 206 (519)
.. +.|.++++++|. .++++.++++++.+++ .+..+
T Consensus 96 ~~-~~~~~lv~~~D~P~i~~~~i~~l~~~~~~-~~~~~ 131 (459)
T 4fce_A 96 FA-DDEDILMLYGDVPLISVDTLQRLLAAKPE-GGIGL 131 (459)
T ss_dssp SC-TTSEEEEEETTCTTCCHHHHHHHHHHCCT-TSEEE
T ss_pred cC-CCCcEEEEeCCcccCCHHHHHHHHHHHhh-CCEEE
Confidence 74 358999999999 5889999999998864 44433
No 52
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=69.50 E-value=18 Score=32.38 Aligned_cols=85 Identities=12% Similarity=0.071 Sum_probs=55.0
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+... . -+|++|.+... + ++. +. +++++..... +..|-..++..|++.. +
T Consensus 31 ~G~pli~~~l~~l~~~-~---~~ivvv~~~~~----~---~~~-~~----~~~~v~~~~~-~~~G~~~si~~~l~~~--~ 91 (201)
T 1e5k_A 31 NGKPLWQHVADALMTQ-L---SHVVVNANRHQ----E---IYQ-AS----GLKVIEDSLA-DYPGPLAGMLSVMQQE--A 91 (201)
T ss_dssp TTEEHHHHHHHHHHHH-C---SCEEEECSSSH----H---HHH-TT----SCCEECCCTT-CCCSHHHHHHHHHHHC--C
T ss_pred CceeHHHHHHHHHHhh-C---CEEEEEcCCcH----H---HHh-hc----CCeEEecCCC-CCCCHHHHHHHHHHhC--C
Confidence 4457888889888742 2 25655543321 1 111 11 4555544322 2234567788888887 5
Q ss_pred CcEEEEEcCCC-ccChHHHHHHHHH
Q 010062 174 SKYVLFLDDDV-RLHPGTIGALTTE 197 (519)
Q Consensus 174 gd~vv~lDaD~-~~~pd~L~~lv~~ 197 (519)
.|+++++++|. .++++.++++++.
T Consensus 92 ~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 92 GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 69999999999 5799999999887
No 53
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=69.30 E-value=17 Score=34.20 Aligned_cols=94 Identities=11% Similarity=-0.007 Sum_probs=56.2
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHh--hcCCCCceEEEEcCCCCCcchhHHHHHHHHHhcc
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQ--EFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMH 171 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~--~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~ 171 (519)
+..+.|..+++++.+... -+++++.+....+ ++.+.+.. .+. .++.++..... .|-..++..+.+..
T Consensus 53 ~g~pli~~~l~~l~~~g~---~~iivv~~~~~~~--~~~~~~~~~~~~~--~~i~~~~~~~~---~G~~~al~~a~~~~- 121 (269)
T 4ecm_A 53 GRYPMIYHAVYKLKQCDI---TDIMIITGKEHMG--DVVSFLGSGQEFG--VSFTYRVQDKA---GGIAQALGLCEDFV- 121 (269)
T ss_dssp TTEEHHHHHHHHHHHTTC---CEEEEEECTTTHH--HHHHHHTTSGGGT--CEEEEEECSSC---CCHHHHHHTTHHHH-
T ss_pred CCEEHHHHHHHHHHHCCC---CEEEEECChhhHH--HHHHHHhhccccC--ceEEEeeCCcc---CcHHHHHHHHHHhc-
Confidence 456788899999887642 3777776643311 22222221 121 13444433322 23456666676666
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHh
Q 010062 172 KDSKYVLFLDDDVRLHPGTIGALTTEMEK 200 (519)
Q Consensus 172 ~~gd~vv~lDaD~~~~pd~L~~lv~~l~~ 200 (519)
+.|.++++.+|.... ..+.++++.+.+
T Consensus 122 -~~~~~lv~~~D~~~~-~~l~~l~~~~~~ 148 (269)
T 4ecm_A 122 -GNDRMVVILGDNIFS-DDIRPYVEEFTN 148 (269)
T ss_dssp -TTSEEEEEETTEEES-SCSHHHHHHHHT
T ss_pred -CCCcEEEEeCCccCc-cCHHHHHHHHHh
Confidence 357899999999776 567888887764
No 54
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=68.95 E-value=14 Score=35.32 Aligned_cols=99 Identities=11% Similarity=0.052 Sum_probs=60.5
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhh---------------------cCCCCceEE
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQE---------------------FKDDVDAKV 147 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~---------------------~~~~~~v~v 147 (519)
++|+-| .+.|...++.+.+... -++++|.+...+. +++...+ .|...++.+
T Consensus 39 ll~i~g-kpli~~~l~~l~~~g~---~~i~vv~~~~~~~----i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~ 110 (297)
T 2ux8_A 39 MLPVVD-RPLIQYAVDEAVEAGI---EQMIFVTGRGKSA----LEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAY 110 (297)
T ss_dssp GCEETT-EEHHHHHHHHHHHTTC---CEEEEEECTTCHH----HHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEE
T ss_pred eeeECC-eEHHHHHHHHHHhCCC---CEEEEEeCCCHHH----HHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEE
Confidence 345444 4788899999887643 3777777654322 2221111 111124666
Q ss_pred EEcCCCCCcchhHHHHHHHHHhccCCCcEEEEEcCCCccC--hHHHHHHHHHHHh
Q 010062 148 VVAGLSTTCSQKIHNQLVGVENMHKDSKYVLFLDDDVRLH--PGTIGALTTEMEK 200 (519)
Q Consensus 148 v~~~~~~~~~~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~--pd~L~~lv~~l~~ 200 (519)
+..+.. .|-..++..+.+.. +.|.++++.+|.... +..+.++++...+
T Consensus 111 ~~~~~~---~Gt~~al~~a~~~~--~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~ 160 (297)
T 2ux8_A 111 VRQQEP---MGLGHAVWCARDIV--GDEPFAVLLPDDFMFGQPGCLKQMVDAYNK 160 (297)
T ss_dssp EECCSC---CCHHHHHHTTHHHH--CSSCEEEECTTEEEESSSCHHHHHHHHHHH
T ss_pred EeCCCC---CChHHHHHHHHHHc--CCCcEEEEeCCeecCCChHHHHHHHHHHHh
Confidence 554332 23455666666665 347888999999987 6889999988765
No 55
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=68.69 E-value=38 Score=32.16 Aligned_cols=120 Identities=9% Similarity=0.046 Sum_probs=67.1
Q ss_pred cEEEEeecc-CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCC--Cc-chhH
Q 010062 85 RVTVVMPLK-GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLST--TC-SQKI 160 (519)
Q Consensus 85 ~VSVIIP~~-ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~--~~-~~K~ 160 (519)
.+.|++.+= |-.+.+..++.|++...-..++.+.++.|+-+++..+.++++.+++.. .++.+.-+... .. ..+.
T Consensus 5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~ 82 (276)
T 3tzt_A 5 ADALLLTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSY--TLYPIRATDDLFSFAKVTDR 82 (276)
T ss_dssp CEEEEEECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTC--EEEEEECC------------
T ss_pred eEEEEEEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCC--EEEEEEeCHHHHhcCccccc
Confidence 366665542 334678889999987654335888888888777777788887776542 56666533211 00 0000
Q ss_pred ---HH-HHHHHH-hccCCCcEEEEEcCCCccChHHHHHHHH-HHHhCCCeEEEE
Q 010062 161 ---HN-QLVGVE-NMHKDSKYVLFLDDDVRLHPGTIGALTT-EMEKNPEIFIQT 208 (519)
Q Consensus 161 ---~n-l~~gl~-~a~~~gd~vv~lDaD~~~~pd~L~~lv~-~l~~dp~vg~V~ 208 (519)
.+ ...-+. ....+.|-++++|+|+.+-.| |.++.+ .+.. ..+++|.
T Consensus 83 ~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~d-i~~L~~~dl~~-~~~aav~ 134 (276)
T 3tzt_A 83 YPKEMYYRLLAGEFLPENLGEILYLDPDMLVINP-LDDLLRTDISD-YILAAAS 134 (276)
T ss_dssp -CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSC-SHHHHTCCCTT-SSEEEEE
T ss_pred cCHHHHHHHHHHHHcccccCeEEEEeCCeeecCC-HHHHhhcCCCC-CeEEEEE
Confidence 00 001111 121247899999999998654 333333 2332 3466654
No 56
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=65.62 E-value=31 Score=34.98 Aligned_cols=95 Identities=8% Similarity=-0.037 Sum_probs=60.9
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHh
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVEN 169 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~ 169 (519)
+|+. ..+.+..+++++.+... -+++++.+... +.+++...++ +++++..+.. .+-..++..+++.
T Consensus 28 ~~i~-gkpli~~~l~~l~~~~~---~~iivv~~~~~----~~i~~~~~~~----~~~~v~~~~~---~g~~~~~~~~~~~ 92 (456)
T 2v0h_A 28 HTIA-GKPMVKHVIDTAHQLGS---ENIHLIYGHGG----DLMRTHLANE----QVNWVLQTEQ---LGTAHAVQQAAPF 92 (456)
T ss_dssp SEET-TEEHHHHHHHHHHHTTC---SCEEEEECTTH----HHHHHHTTTC----CCEEEECSCC---CCHHHHHHHHGGG
T ss_pred cEEC-CccHHHHHHHHHHhCCC---CcEEEEeCCCH----HHHHHHhhcC----CcEEEeCCCC---CCcHHHHHHHHHh
Confidence 3443 45789999999987643 26666665432 2233333222 3566654332 2345677777776
Q ss_pred ccCCCcEEEEEcCCCc-cChHHHHHHHHHHHh
Q 010062 170 MHKDSKYVLFLDDDVR-LHPGTIGALTTEMEK 200 (519)
Q Consensus 170 a~~~gd~vv~lDaD~~-~~pd~L~~lv~~l~~ 200 (519)
.. +.|.++++++|.. ++++.++++++.+++
T Consensus 93 ~~-~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 93 FK-DNENIVVLYGDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp CC-TTSEEEEEETTCTTCCHHHHHHHHHHCCT
T ss_pred cC-CCCeEEEEcCCcceeCHHHHHHHHHHHhc
Confidence 63 2689999999994 788999999988764
No 57
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=65.45 E-value=7.4 Score=34.62 Aligned_cols=94 Identities=11% Similarity=0.007 Sum_probs=52.7
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+.+... -+++++.+...+...+.+ ...++...++.++..+ ..+ -..++..+++..
T Consensus 25 ~g~pli~~~l~~l~~~~~---~~v~vv~~~~~~~i~~~~---~~~~~~~~~~~~~~~~-~~g---~~~si~~al~~~--- 91 (196)
T 3rsb_A 25 CGRCLIDYVVSPLLKSKV---NNIFIATSPNTPKTKEYI---NSAYKDYKNIVVIDTS-GKG---YIEDLNECIGYF--- 91 (196)
T ss_dssp TTEEHHHHHHHHHHSSSC---CCEEEECCTTCHHHHHHH---HHHTTTTTEEEE------------CCCCCTTTTTC---
T ss_pred CCEEHHHHHHHHHHHCCC---CEEEEEeCCChHHHHHHH---HhhccCCCCEEEEECC-CCC---cHHHHHHHHHhC---
Confidence 445889999999987652 266666554432222222 2223211135554332 111 112233344444
Q ss_pred CcEEEEEcCCCc-cChHHHHHHHHHHHh
Q 010062 174 SKYVLFLDDDVR-LHPGTIGALTTEMEK 200 (519)
Q Consensus 174 gd~vv~lDaD~~-~~pd~L~~lv~~l~~ 200 (519)
.|.++++++|.- ++++.++++++.+.+
T Consensus 92 ~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 119 (196)
T 3rsb_A 92 SEPFLVVSSDLINLKSKIINSIVDYFYC 119 (196)
T ss_dssp SSCEEEEETTEESCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 488999999995 699999999999874
No 58
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=64.69 E-value=29 Score=33.30 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=59.8
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhh---cCCCCceEEEEcCCCCCcchhHHHHHH
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQE---FKDDVDAKVVVAGLSTTCSQKIHNQLV 165 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~---~~~~~~v~vv~~~~~~~~~~K~~nl~~ 165 (519)
++|++|. +.+...++.+....- -+|++|....+. +.++++... +. +++.++..+.+.| -..++..
T Consensus 28 llpi~gk-pli~~~l~~l~~~gi---~~Iivv~~~~~~---~~i~~~l~~g~~~g--~~i~~~~~~~~~G---~~~al~~ 95 (295)
T 1lvw_A 28 LLPIYDK-PMIYYPLSVLMLAGI---RDILIISTPRDL---PLYRDLLGDGSQFG--VRFSYRVQEEPRG---IADAFIV 95 (295)
T ss_dssp GSEETTE-ETTHHHHHHHHHTTC---CEEEEEECTTTH---HHHHHHHTTSGGGT--SEEEEEECSSCCC---GGGHHHH
T ss_pred ecEECCe-eHHHHHHHHHHHCCC---CeEEEEeccchH---HHHHHHhhhccccC--ceEEEeeCCCCCC---hHHHHHH
Confidence 4677764 788888988876542 266666543222 223443332 22 1445554443333 3445555
Q ss_pred HHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEecccc
Q 010062 166 GVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLD 213 (519)
Q Consensus 166 gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~ 213 (519)
+.+... +.+++++. +|....+.-+.++++.+.+...-..+.+++..
T Consensus 96 a~~~i~-~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~ 141 (295)
T 1lvw_A 96 GKDFIG-DSKVALVL-GDNVFYGHRFSEILRRAASLEDGAVIFGYYVR 141 (295)
T ss_dssp THHHHT-TSCEEEEE-TTCCEECTTHHHHHHHHHTCCSSEEEEEEECS
T ss_pred HHHHhC-CCcEEEEE-CCccccCcCHHHHHHHHHHcCCCcEEEEEECC
Confidence 666553 34677766 88876445678888777532222344454433
No 59
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=61.76 E-value=39 Score=32.31 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=53.7
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhh---cCCCCceEEEEcCCCCCcchhHHHHHH
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQE---FKDDVDAKVVVAGLSTTCSQKIHNQLV 165 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~---~~~~~~v~vv~~~~~~~~~~K~~nl~~ 165 (519)
++|++|. +.+...++.+....- -+|++|....+. +.++++... +. .++.++..+.+.| -..++..
T Consensus 27 llpi~gk-pli~~~l~~l~~~gi---~~I~vv~~~~~~---~~i~~~l~~g~~~g--~~i~~~~~~~~~G---~~~al~~ 94 (293)
T 1fxo_A 27 LLPVYDK-PMIYYPLSTLMLAGI---REILIISTPQDT---PRFQQLLGDGSNWG--LDLQYAVQPSPDG---LAQAFLI 94 (293)
T ss_dssp GSEETTE-ETTHHHHHHHHHTTC---CEEEEEECTTTH---HHHHHHHTTSGGGT--CEEEEEECSSCCC---GGGHHHH
T ss_pred eCeECCE-eHHHHHHHHHHHCCC---CEEEEEeccccH---HHHHHHHhcccccC--ceEEEeeCCCCCC---HHHHHHH
Confidence 4566664 788889998876542 266666543322 223343332 22 1344444433333 3445555
Q ss_pred HHHhccCCCcEEEEEcCCCccChHHHHHHHHHHH
Q 010062 166 GVENMHKDSKYVLFLDDDVRLHPGTIGALTTEME 199 (519)
Q Consensus 166 gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~ 199 (519)
+.+... +.+++++. +|....+.-+.++++.+.
T Consensus 95 a~~~i~-~~~~~lv~-gD~~~~~~~l~~~l~~~~ 126 (293)
T 1fxo_A 95 GESFIG-NDLSALVL-GDNLYYGHDFHELLGSAS 126 (293)
T ss_dssp THHHHT-TSEEEEEE-TTEEEECTTHHHHHHHHH
T ss_pred HHHHhC-CCCEEEEE-CChhccCccHHHHHHHHH
Confidence 666553 23455555 998764456788888775
No 60
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=60.32 E-value=14 Score=35.41 Aligned_cols=109 Identities=14% Similarity=0.059 Sum_probs=59.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCCCCChhhHHHHhhccccccccccCCCccccc-ccchhc
Q 010062 173 DSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLPSGSLGSYCIYEYHMPCSMGFATGGKTFFLW-GGCMMM 251 (519)
Q Consensus 173 ~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~~~~ 251 (519)
+.+++++.|+|+.+..+-|.++++.+. |+-.+..|.+........ .++...... ..... .++. |+.+++
T Consensus 93 ~~~Wf~~~DDDtyv~~~nL~~~L~~~d--~~~~~YiG~~~~~~~~~~-----~~~~~~~~~--~~~~~-~y~~GGaG~vl 162 (280)
T 2j0a_A 93 GLRWFCHVDDDNYVNPKALLQLLKTFP--QDRDVYVGKPSLNRPIHA-----SELQSKQRT--KLVRF-WFATGGAGFCI 162 (280)
T ss_dssp TCSEEEEEETTEEECHHHHHHHHTTSC--TTSCCEEECEEC--------------------------C-CEECGGGCEEE
T ss_pred CCcEEEEeCCCcEEcHHHHHHHHHhCC--CCCCEEEEEeccCccccc-----cccCccccc--ccccc-CcccCCCEEEE
Confidence 579999999999999999999988774 544444443332110000 000000000 00011 2454 456889
Q ss_pred cHhhhccccccC-------cccCCCCCcccHHHHHHHHH-hCCCcEEecC
Q 010062 252 HADDFRLDRYGV-------VSGLRDGGYSDDMTLAALAG-AHNRLITSPP 293 (519)
Q Consensus 252 Rr~~~~~~~~Gg-------~~~~~~g~~~ED~~l~~~~~-~~g~~v~~~~ 293 (519)
.|+++++ +-. .+.-..-...||..+++.++ +.|....-.+
T Consensus 163 Sr~~l~~--l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~ 210 (280)
T 2j0a_A 163 NRQLALK--MVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSP 210 (280)
T ss_dssp EHHHHHH--HHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECT
T ss_pred CHHHHHH--HHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecc
Confidence 9998843 211 01000113458999999887 8887766543
No 61
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=58.26 E-value=42 Score=32.14 Aligned_cols=115 Identities=12% Similarity=0.114 Sum_probs=59.8
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCC-CCceEEEEcCCCCCcchhHHHHHHHH
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKD-DVDAKVVVAGLSTTCSQKIHNQLVGV 167 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~-~~~v~vv~~~~~~~~~~K~~nl~~gl 167 (519)
++|++| .+.+...++.+....- -+|++|....+. +.++++...... ..++.++..+.+.| -..++..+.
T Consensus 28 llpi~g-kpli~~~l~~l~~~gi---~~I~vv~~~~~~---~~i~~~l~~g~~~g~~i~~~~~~~~~G---~~~al~~a~ 97 (296)
T 1mc3_A 28 LLPIYD-KPMIYYPLSVLMLAGI---REILIITTPEDK---GYFQRLLGDGSEFGIQLEYAEQPSPDG---LAQAFIIGE 97 (296)
T ss_dssp GSEETT-EETTHHHHHHHHHTTC---CEEEEEECTTTH---HHHHHHHTTSGGGTCEEEEEECSSCCC---STHHHHHTH
T ss_pred eeEECC-eeHHHHHHHHHHhCCC---CcEEEEechhHH---HHHHHHHhcccccCceEEEeccCCCCC---HHHHHHHHH
Confidence 456666 4788888888876532 367666543222 223444432110 01444444443333 344555666
Q ss_pred HhccCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeccccCC
Q 010062 168 ENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEKNPEIFIQTGYPLDLP 215 (519)
Q Consensus 168 ~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~dp~vg~V~g~~~~~~ 215 (519)
+... +.+++++. +|....+..+.++++.+.+...-..+.+++...|
T Consensus 98 ~~i~-~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~dp 143 (296)
T 1mc3_A 98 TFLN-GEPSCLVL-GDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDP 143 (296)
T ss_dssp HHHT-TSCEEEEE-TTEEEECSSCHHHHHHHTTCCSSEEEEEEECSCC
T ss_pred HHhC-CCCEEEEE-CCccccccCHHHHHHHHHHcCCCCEEEEEECCCc
Confidence 6653 24566666 8876544567788877743222233444343333
No 62
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=57.56 E-value=18 Score=32.96 Aligned_cols=87 Identities=15% Similarity=0.081 Sum_probs=52.2
Q ss_pred CchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCCC
Q 010062 95 FGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKDS 174 (519)
Q Consensus 95 e~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~g 174 (519)
..+.+..+++.+.+. . -++++|. ...+ ++.+.+.+++.. +++++..+... .|-..++..+++.. +.
T Consensus 44 g~pli~~~l~~l~~~-~---~~i~vv~-~~~~---~~~~~~~~~~~~--~~~~v~~~~~~--~g~~~~i~~a~~~~--~~ 109 (232)
T 2xme_A 44 GCEIILRTMKLLSPH-V---SEFIIVA-SRYA---DDIDAFLKDKGF--NYKIVRHDRPE--KGNGYSLLVAKNHV--ED 109 (232)
T ss_dssp TEEHHHHHHHHHGGG-E---EEEEEEE-STTH---HHHHHHHTTSCC--CEEEEECSCGG--GCHHHHHHTTGGGC--CS
T ss_pred CEEHHHHHHHHHHHh-C---CEEEEEe-CChH---HHHHHHHHhcCC--cEEEEECCCCC--CCcHHHHHHHHHHC--CC
Confidence 457888899988765 2 2666666 3222 233333344331 57777654321 23356666677766 33
Q ss_pred cEEEEEcCCCccChHHHHHHHH
Q 010062 175 KYVLFLDDDVRLHPGTIGALTT 196 (519)
Q Consensus 175 d~vv~lDaD~~~~pd~L~~lv~ 196 (519)
+ ++++.+|...+++.++++++
T Consensus 110 ~-~lv~~~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 110 R-FILTMGDHVYSQQFIEKAVR 130 (232)
T ss_dssp S-EEEEETTEEECHHHHHHHTT
T ss_pred C-EEEEcCCcccCHHHHHHHHh
Confidence 4 55788998888888877754
No 63
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=57.28 E-value=18 Score=34.97 Aligned_cols=108 Identities=14% Similarity=0.083 Sum_probs=61.5
Q ss_pred CchHHHHHHHHH-HhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCC--------CC-cchhHHHHH
Q 010062 95 FGEHNLLNWRSQ-VTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLS--------TT-CSQKIHNQL 164 (519)
Q Consensus 95 e~~~L~~~L~Sl-~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~--------~~-~~~K~~nl~ 164 (519)
-...+..++.|+ +... +.++.+.++.|+-+++..+.++++...+.. .++.+.-... .+ .+.-...-.
T Consensus 11 Y~~~~~vli~Sl~l~~~-~~~~~f~il~~~ls~~~~~~L~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl 87 (311)
T 1g9r_A 11 YAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGG--NIRFIDVNPEDFAGFPLNIRHISITTYARL 87 (311)
T ss_dssp GHHHHHHHHHHHHHTCT-TSCCEEEEEESSCCHHHHHHHHHHSGGGTT--TEEEEECCGGGGTTSCCCCTTCCGGGGGGG
T ss_pred HHHHHHHHHHHHHHHcC-CCCceEEEEECCCCHHHHHHHHHHHHHcCC--EEEEEEcCHHHHhcCccccccCCHHHHHHH
Confidence 345778889999 6554 336888888888777777888887666543 5666542211 00 010000000
Q ss_pred HHHHhccCCCcEEEEEcCCCccChHHHHHHHHH-HHhCCCeEEEE
Q 010062 165 VGVENMHKDSKYVLFLDDDVRLHPGTIGALTTE-MEKNPEIFIQT 208 (519)
Q Consensus 165 ~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~-l~~dp~vg~V~ 208 (519)
..-+.. ++.|-++++|+|+++-.| |.++.+. +. +..+++|.
T Consensus 88 ~l~~ll-~~~~kvlyLD~D~iv~~d-i~eL~~~~l~-~~~~aav~ 129 (311)
T 1g9r_A 88 KLGEYI-ADCDKVLYLDIDVLVRDS-LTPLWDTDLG-DNWLGASI 129 (311)
T ss_dssp GHHHHC-CSCSCEEEECSSEEECSC-CHHHHTCCCT-TCSEEEEE
T ss_pred HHHHHh-hhcCEEEEEcCCeEeccC-HHHHhccCCC-CcEEEEEe
Confidence 111112 256899999999998766 4444432 32 23455543
No 64
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=55.29 E-value=44 Score=29.74 Aligned_cols=78 Identities=18% Similarity=0.209 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCCCcE
Q 010062 97 EHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKDSKY 176 (519)
Q Consensus 97 ~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~gd~ 176 (519)
+.+..+++.+... . -++++|.+...+ +. .. +++++..... ..+-..++..|++.. +.|.
T Consensus 41 pll~~~l~~l~~~--~--~~i~vv~~~~~~------~~----~~---~~~~v~~~~~--~~g~~~~i~~al~~~--~~~~ 99 (201)
T 2e8b_A 41 KVIERVYETAKSV--F--KEVYIVAKDREK------FS----FL---NAPVVLDEFE--ESASIIGLYTALKHA--KEEN 99 (201)
T ss_dssp HHHHHHHHHHHTT--C--SEEEEEESCSGG------GG----GG---TCCEEECCCS--SCCHHHHHHHHHHHC--SSSE
T ss_pred EHHHHHHHHHHHh--C--CEEEEEeCcHHH------hh----cC---CceEEecCCC--CCCcHHHHHHHHHHc--CCCC
Confidence 3566677776654 2 267777654432 11 11 2455554322 124566778888887 4689
Q ss_pred EEEEcCCCc-cChHHHHH-HH
Q 010062 177 VLFLDDDVR-LHPGTIGA-LT 195 (519)
Q Consensus 177 vv~lDaD~~-~~pd~L~~-lv 195 (519)
++++++|.. ++++.+++ ++
T Consensus 100 ~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 100 VFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EEEEETTCTTCCHHHHHHHHH
T ss_pred EEEEeCCcCcCCHHHHHHHHh
Confidence 999999996 58999988 77
No 65
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=54.28 E-value=43 Score=31.87 Aligned_cols=99 Identities=15% Similarity=0.113 Sum_probs=58.2
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhh---------------------c-CCCCceEE
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQE---------------------F-KDDVDAKV 147 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~---------------------~-~~~~~v~v 147 (519)
+|+.| .+.|..+++.+..... -++++|.+...+ ++.+.+... . +...++.+
T Consensus 34 l~i~g-kpli~~~l~~l~~~gi---~~i~vv~~~~~~---~i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~i~~ 106 (302)
T 2e3d_A 34 LPLVD-KPLIQYVVNECIAAGI---TEIVLVTHSSKN---SIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQ 106 (302)
T ss_dssp CEETT-EEHHHHHHHHHHHTTC---CEEEEEECGGGH---HHHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTCEEEE
T ss_pred eEECC-eEHHHHHHHHHHHCCC---CEEEEEeCCCHH---HHHHHHhcchhhhhhhhhccchhhhhhhhhccccCcceEE
Confidence 45544 5889999999887642 277777654322 222211110 0 11113444
Q ss_pred EEcCCCCCcchhHHHHHHHHHhccCCCcEEEEEcCCCccC----hH---HHHHHHHHHHh
Q 010062 148 VVAGLSTTCSQKIHNQLVGVENMHKDSKYVLFLDDDVRLH----PG---TIGALTTEMEK 200 (519)
Q Consensus 148 v~~~~~~~~~~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~----pd---~L~~lv~~l~~ 200 (519)
+..... .|-.+++..+.... ..+.++++.+|.... ++ .+.++++...+
T Consensus 107 ~~~~~~---~Gt~~al~~a~~~~--~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~ 161 (302)
T 2e3d_A 107 VRQGLA---KGLGHAVLCAHPVV--GDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDE 161 (302)
T ss_dssp EECSSC---CCHHHHHHHTHHHH--CSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHH
T ss_pred eeCCcc---CCHHHHHHHHHHHc--CCCcEEEEcCCccccCccccchHHHHHHHHHHHHh
Confidence 444332 23456676777766 346788999999987 45 79999988764
No 66
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=53.88 E-value=65 Score=32.07 Aligned_cols=87 Identities=11% Similarity=0.095 Sum_probs=57.1
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+.+.... -++++|.+ ++ +.++++ .+ +++++.. + .+....+..|++.. +
T Consensus 29 ~GkPLi~~~l~~l~~~~~~--~~IvVvt~--~~---~~i~~~---~~---~v~~v~~----g-~g~~~sv~~aL~~l--~ 88 (371)
T 1w55_A 29 GNDPLWLYATKNLSSFYPF--KKIVVTSS--NI---TYMKKF---TK---NYEFIEG----G-DTRAESLKKALELI--D 88 (371)
T ss_dssp BTEEHHHHHHHHHHTTSCC--SCEEEEES--CH---HHHHTT---CS---SSEEEEC----C-SSHHHHHHHHHTTC--C
T ss_pred CCeEHHHHHHHHHHccCCC--CeEEEEcC--CH---HHHHHH---hC---CCEEEeC----C-CChHHHHHHHHHhc--C
Confidence 4567899999998764322 26777766 21 222221 11 2455522 1 23456777788877 4
Q ss_pred CcEEEEEcCCC-ccChHHHHHHHHHHHh
Q 010062 174 SKYVLFLDDDV-RLHPGTIGALTTEMEK 200 (519)
Q Consensus 174 gd~vv~lDaD~-~~~pd~L~~lv~~l~~ 200 (519)
.|+++++|+|. .++++.++++++.+.+
T Consensus 89 ~d~vlv~~~D~Pli~~~~i~~li~~~~~ 116 (371)
T 1w55_A 89 SEFVMVSDVARVLVSKNLFDRLIENLDK 116 (371)
T ss_dssp SSEEEEEETTCTTCCHHHHHHHHTTGGG
T ss_pred CCeEEEEeCCcccCCHHHHHHHHHHHHh
Confidence 68999999999 4699999999998875
No 67
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=53.77 E-value=27 Score=33.85 Aligned_cols=104 Identities=11% Similarity=0.014 Sum_probs=58.6
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHH------H-H--------Hhh---cCCCCceEEEEcC
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVL------R-L--------LQE---FKDDVDAKVVVAG 151 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~------~-l--------~~~---~~~~~~v~vv~~~ 151 (519)
+|+-| .+.|..+++.+..... -++++|.+...+.-.+.+. + + .++ .+...++.++..+
T Consensus 38 l~i~g-kpli~~~l~~l~~~gi---~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~i~~~~~~ 113 (323)
T 2pa4_A 38 LPVVD-TPGIELIAAEAAELGA---TRLAIITAPNKAGVLAHFERSSELEETLMERGKTDQVEIIRRAADLIKAVPVTQD 113 (323)
T ss_dssp CEETT-EEHHHHHHHHHHHTTC---CEEEEEECTTCHHHHHTTSCCHHHHHHHHHTTCHHHHHHTTHHHHHCEEEEEECS
T ss_pred eeECC-EEHHHHHHHHHHhCCC---CEEEEEecCcHHHHHHHHhccchhhhhhhccchhhhhhhhhccccCcceEEEeCC
Confidence 44444 4788899999887542 3777777654322111110 0 0 000 0000145555443
Q ss_pred CCCCcchhHHHHHHHHHhccCCCcEEEEEcCCCccC-hHHHHHHHHHHHh
Q 010062 152 LSTTCSQKIHNQLVGVENMHKDSKYVLFLDDDVRLH-PGTIGALTTEMEK 200 (519)
Q Consensus 152 ~~~~~~~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~-pd~L~~lv~~l~~ 200 (519)
.. .|-.+++..+......+.|.++++.+|...+ +..+.++++.+.+
T Consensus 114 ~~---~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~ 160 (323)
T 2pa4_A 114 KP---LGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAE 160 (323)
T ss_dssp SC---CCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHT
T ss_pred cc---CCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHh
Confidence 32 2445666666665532235688999999996 6899999998875
No 68
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=53.06 E-value=1e+02 Score=31.15 Aligned_cols=105 Identities=10% Similarity=-0.033 Sum_probs=60.3
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcC-C------CCceEEEEcCCC----CCcc
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFK-D------DVDAKVVVAGLS----TTCS 157 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~-~------~~~v~vv~~~~~----~~~~ 157 (519)
++|+.|..+.+...++.+.+... -++++|.+...+. +.+.+.+.+. + ...++++..... ....
T Consensus 45 llpi~g~~pli~~~l~~l~~~g~---~~i~vv~~~~~~~---i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 118 (451)
T 1yp2_A 45 AVPLGANYRLIDIPVSNCLNSNI---SKIYVLTQFNSAS---LNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPDWFQ 118 (451)
T ss_dssp GCEETTTEETTHHHHHHHHHTTC---CEEEEEESCCCHH---HHHHHHHHCC--------CCEEEEEESCSSTTSCCCCC
T ss_pred eeEECCcceeHHHHHHHHHHCCC---CEEEEEeccCHHH---HHHHHhhhhhcccccccccCcEEEeccccccccccccc
Confidence 45666665788889999887643 3777777654432 2222322221 0 002555542111 1123
Q ss_pred hhHHHHHHHHHhccC-CCcEEEEEcCCCccChHHHHHHHHHHHh
Q 010062 158 QKIHNQLVGVENMHK-DSKYVLFLDDDVRLHPGTIGALTTEMEK 200 (519)
Q Consensus 158 ~K~~nl~~gl~~a~~-~gd~vv~lDaD~~~~pd~L~~lv~~l~~ 200 (519)
+-..++..+++.... ..|.++++.+|...+.+ +.++++.+.+
T Consensus 119 Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~ 161 (451)
T 1yp2_A 119 GTADAVRQYLWLFEEHTVLEYLILAGDHLYRMD-YEKFIQAHRE 161 (451)
T ss_dssp SHHHHHHHTHHHHTTSCCSEEEEECSCEECCCC-HHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCC-HHHHHHHHHH
Confidence 455667777766531 14789999999976654 7888887754
No 69
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=46.71 E-value=1.3e+02 Score=27.29 Aligned_cols=83 Identities=12% Similarity=0.020 Sum_probs=52.6
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++. ... --++++|.+. . +++ ..+ + .++++..+ .+....+..|++.. +
T Consensus 50 ~gkpli~~~l~~--~~~---~~~ivvv~~~-~------~~~-~~~-~---~v~~~~~~-----~~~~~~i~~al~~~--~ 105 (236)
T 2px7_A 50 GGRTLLEWTLAA--FRD---AAEVLVALPP-G------AEP-PKG-L---GAVFLEGG-----ATRQASVARLLEAA--S 105 (236)
T ss_dssp SSSBHHHHHHHH--TTT---CSEEEEEECT-T------CCC-CTT-C---SCEEEECC-----SSHHHHHHHHHHHC--C
T ss_pred CCEEHHHHHHHh--cCC---CCeEEEEeCH-H------HHH-hhc-C---CcEEEeCC-----CchHHHHHHHHHHc--C
Confidence 345677777777 221 2377777664 1 111 111 1 45554321 12456677888877 4
Q ss_pred CcEEEEEcCCC-ccChHHHHHHHHHHHh
Q 010062 174 SKYVLFLDDDV-RLHPGTIGALTTEMEK 200 (519)
Q Consensus 174 gd~vv~lDaD~-~~~pd~L~~lv~~l~~ 200 (519)
.|.++++++|. .++++.++++++.+.+
T Consensus 106 ~~~vlv~~~D~P~~~~~~i~~l~~~~~~ 133 (236)
T 2px7_A 106 LPLVLVHDVARPFVSRGLVARVLEAAQR 133 (236)
T ss_dssp SSEEEECCTTCCCCCHHHHHHHHHHHHH
T ss_pred CCeEEEecCccccCCHHHHHHHHHHHHh
Confidence 68999999997 5799999999998865
No 70
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=42.21 E-value=1.8e+02 Score=26.36 Aligned_cols=94 Identities=17% Similarity=0.078 Sum_probs=49.7
Q ss_pred EEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchh--HHHH
Q 010062 86 VTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQK--IHNQ 163 (519)
Q Consensus 86 VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K--~~nl 163 (519)
.-|++-+-+...++.+.+++... .+ +.||+.|..+.+.+. .+.++++ ++.++........+.. -..+
T Consensus 13 ~ri~vl~SG~gsnl~all~~~~~-~~--~~eI~~Vis~~~a~~----~~~A~~~----gIp~~~~~~~~~~~r~~~d~~~ 81 (215)
T 3da8_A 13 ARLVVLASGTGSLLRSLLDAAVG-DY--PARVVAVGVDRECRA----AEIAAEA----SVPVFTVRLADHPSRDAWDVAI 81 (215)
T ss_dssp EEEEEEESSCCHHHHHHHHHSST-TC--SEEEEEEEESSCCHH----HHHHHHT----TCCEEECCGGGSSSHHHHHHHH
T ss_pred cEEEEEEeCChHHHHHHHHHHhc-cC--CCeEEEEEeCCchHH----HHHHHHc----CCCEEEeCcccccchhhhhHHH
Confidence 44555556777888888887643 33 478877776654332 2334443 3444433211111111 1233
Q ss_pred HHHHHhccCCCcEEEEEcCCCccChHHHH
Q 010062 164 LVGVENMHKDSKYVLFLDDDVRLHPGTIG 192 (519)
Q Consensus 164 ~~gl~~a~~~gd~vv~lDaD~~~~pd~L~ 192 (519)
...++.. +-|+++..-=--.++++.|+
T Consensus 82 ~~~l~~~--~~Dlivlagy~~iL~~~~l~ 108 (215)
T 3da8_A 82 TAATAAH--EPDLVVSAGFMRILGPQFLS 108 (215)
T ss_dssp HHHHHTT--CCSEEEEEECCSCCCHHHHH
T ss_pred HHHHHhh--CCCEEEEcCchhhCCHHHHh
Confidence 3444544 45677776666666666554
No 71
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=41.05 E-value=58 Score=32.67 Aligned_cols=105 Identities=9% Similarity=0.031 Sum_probs=58.1
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCC-----CceEEEEcCCC---CC-cchh
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDD-----VDAKVVVAGLS---TT-CSQK 159 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~-----~~v~vv~~~~~---~~-~~~K 159 (519)
++|+.|..+.+..+++.+.+... -+++++.+...+. +.+.+...+... ..++++..... .. ..+-
T Consensus 37 llpi~gk~pli~~~l~~l~~~gi---~~i~vv~~~~~~~---i~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt 110 (420)
T 3brk_X 37 AVYFGGKARIIDFALSNALNSGI---RRIGVATQYKAHS---LIRHLQRGWDFFRPERNESFDILPASQRVSETQWYEGT 110 (420)
T ss_dssp GSEETTTEETHHHHHHHHHHTTC---CEEEEEECTTCHH---HHHHHHHHSCCCCGGGTCEEEEECCC-------CCCCH
T ss_pred ccccCCCCcHHHHHHHHHHhCCC---CeEEEEeCCChHH---HHHHHhhhhccccccccCCEEEeCccccccCCccccCC
Confidence 45666665789999999887643 3777777654322 222222223210 02555432211 10 1344
Q ss_pred HHHHHHHHHhccC-CCcEEEEEcCCCccChHHHHHHHHHHHh
Q 010062 160 IHNQLVGVENMHK-DSKYVLFLDDDVRLHPGTIGALTTEMEK 200 (519)
Q Consensus 160 ~~nl~~gl~~a~~-~gd~vv~lDaD~~~~pd~L~~lv~~l~~ 200 (519)
..++..+++.... +.|.++++.+|...+.+ +.++++.+.+
T Consensus 111 ~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~-l~~l~~~~~~ 151 (420)
T 3brk_X 111 ADAVYQNIDIIEPYAPEYMVILAGDHIYKMD-YEYMLQQHVD 151 (420)
T ss_dssp HHHHHTTHHHHHHHCCSEEEEEESSCEECBC-THHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEecccEEEchH-HHHHHHHHHH
Confidence 5666666655421 24789999999966554 7888887754
No 72
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=39.94 E-value=92 Score=28.21 Aligned_cols=79 Identities=10% Similarity=0.005 Sum_probs=51.8
Q ss_pred CCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHhccCC
Q 010062 94 GFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVENMHKD 173 (519)
Q Consensus 94 ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~ 173 (519)
+..+.+..+++.+.... . +++++.+. |. ++ ++- ++++ . ...+-.+++..+++.. +
T Consensus 30 ~g~pll~~~l~~l~~~~---~-~ivvv~~~--~~----i~----~~~---~~~~---~---~~~g~~~~i~~a~~~~--~ 84 (232)
T 2dpw_A 30 RGRPMVEWVLEALYAAG---L-SPVYVGEN--PG----LV----PAP---ALTL---P---DRGGLLENLEQALEHV--E 84 (232)
T ss_dssp TTEETHHHHHHHHHHTT---C-EEEEESCC--SS----CS----SCC---SEEE---C---CCSSHHHHHHHHHHTC--C
T ss_pred CCEEHHHHHHHHHHhcC---C-EEEEEeCh--HH----Hh----hhc---CeEe---c---CCCCHHHHHHHHHHHc--C
Confidence 45678999999987652 3 77665332 21 11 111 2443 2 2223456777888877 4
Q ss_pred CcEEEEEcCCCc-cChHHHHHHHHHHH
Q 010062 174 SKYVLFLDDDVR-LHPGTIGALTTEME 199 (519)
Q Consensus 174 gd~vv~lDaD~~-~~pd~L~~lv~~l~ 199 (519)
|.++++++|.. ++++.++++++ .+
T Consensus 85 -~~~lv~~~D~P~~~~~~i~~l~~-~~ 109 (232)
T 2dpw_A 85 -GRVLVATGDIPHLTEEAVRFVLD-KA 109 (232)
T ss_dssp -SEEEEEETTCTTCCHHHHHHHHH-HC
T ss_pred -CCEEEEeCCcccCCHHHHHHHHh-cC
Confidence 88999999995 68999999998 54
No 73
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=36.74 E-value=2.2e+02 Score=28.37 Aligned_cols=108 Identities=12% Similarity=-0.011 Sum_probs=55.1
Q ss_pred CcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcch--hHH
Q 010062 84 PRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQ--KIH 161 (519)
Q Consensus 84 P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~--K~~ 161 (519)
.+++.+|-+++..+.+++.++.+ ..|.+.=.|-+|..+++.-.+.++++...++ ++.++.......+++ -+.
T Consensus 84 ~kiAflil~h~d~~~l~rll~~l---y~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~---NV~v~~~~~~v~WGg~S~v~ 157 (391)
T 2gak_A 84 FPIAYSIVVHHKIEMLDRLLRAI---YMPQNFYCIHVDRKAEESFLAAVQGIASCFD---NVFVASQLESVVYASWTRVK 157 (391)
T ss_dssp SCEEEEEEECSCHHHHHHHHHHH---CCTTSEEEEEECTTSCHHHHHHHHHHHHTCT---TEEECSSCCCCCTTSHHHHH
T ss_pred CCEEEEEEecCCHHHHHHHHHHH---hCCCCeEEEEEeCCCCHHHHHHHHHHHhcCC---CEEEeccCcccccCCchHHH
Confidence 57999999999777776666655 3353333444444554433444444555566 577653333322222 122
Q ss_pred HHHHHHHhc---cCCCcEEEEEcCCCcc--ChHHHHHHHHH
Q 010062 162 NQLVGVENM---HKDSKYVLFLDDDVRL--HPGTIGALTTE 197 (519)
Q Consensus 162 nl~~gl~~a---~~~gd~vv~lDaD~~~--~pd~L~~lv~~ 197 (519)
|-..+++.+ ..+-++++.+-+++.+ +.+.|.+....
T Consensus 158 A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~ 198 (391)
T 2gak_A 158 ADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKC 198 (391)
T ss_dssp HHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHh
Confidence 222222222 1245666666665554 34444444433
No 74
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=35.86 E-value=91 Score=28.90 Aligned_cols=97 Identities=11% Similarity=0.025 Sum_probs=52.2
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHHh
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVEN 169 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~~ 169 (519)
+|+.| .+.|..+|+++.+..-. -++++|.....+ ..+.+++...++... .++++..... ..|-.+++..+.+.
T Consensus 25 lpv~g-kpli~~~l~~l~~~~gi--~~iivv~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~--~~Gt~~av~~a~~~ 97 (255)
T 4evw_A 25 LEAHG-QTLFEHSVNSFAAYFAS--TPFLFIVRNVYD-TAVFVREKATQLGIK-QFYIAELHTE--TRGQAETVTLGLEE 97 (255)
T ss_dssp CEETT-EEHHHHHHGGGGGGTTT--SCEEEEEESSTT-HHHHHHHHHHHHTCS-SEEEEEESSC--CSSHHHHHHHHHHH
T ss_pred cEECC-eEHHHHHHHHHhccCCC--ceEEEEECchhh-hHHHHHHHHHHcCCC-CceEEEeCCC--CCCHHHHHHHHHHH
Confidence 45545 48899999988763212 266666655444 334444433333211 3444433221 22345667777766
Q ss_pred cc----CCCcEEEEEcCCCccChHHHHH
Q 010062 170 MH----KDSKYVLFLDDDVRLHPGTIGA 193 (519)
Q Consensus 170 a~----~~gd~vv~lDaD~~~~pd~L~~ 193 (519)
.. ...+-++++++|+...+..+.+
T Consensus 98 l~~~~~~~~~~~lV~~gD~l~~~~~~~~ 125 (255)
T 4evw_A 98 LAKQGVDYQGSITVFNIDTFRPNFVFPD 125 (255)
T ss_dssp HHHTTCCCCSCEEECCTTEECTTCCCCG
T ss_pred HhhcccCCCCcEEEEeCCEEEecchhHH
Confidence 51 1234578899999875443433
No 75
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=32.23 E-value=2.9e+02 Score=25.03 Aligned_cols=95 Identities=13% Similarity=0.045 Sum_probs=55.6
Q ss_pred cEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHH
Q 010062 85 RVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQL 164 (519)
Q Consensus 85 ~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~ 164 (519)
+.-|.|-+-+...++.+.++.+.+...+ .||+.|..+..|... .+.++++ ++.+...+... . +...+.
T Consensus 8 ~~ri~vl~SG~gsnl~all~~~~~~~~~--~~I~~Vis~~~~a~~---l~~A~~~----gIp~~~~~~~~-~--~~~~~~ 75 (215)
T 3kcq_A 8 ELRVGVLISGRGSNLEALAKAFSTEESS--VVISCVISNNAEARG---LLIAQSY----GIPTFVVKRKP-L--DIEHIS 75 (215)
T ss_dssp CEEEEEEESSCCHHHHHHHHHTCCC-CS--EEEEEEEESCTTCTH---HHHHHHT----TCCEEECCBTT-B--CHHHHH
T ss_pred CCEEEEEEECCcHHHHHHHHHHHcCCCC--cEEEEEEeCCcchHH---HHHHHHc----CCCEEEeCccc-C--ChHHHH
Confidence 3445555667788899999887665554 788777765555321 2333443 34444432211 1 223455
Q ss_pred HHHHhccCCCcEEEEEcCCCccChHHHHH
Q 010062 165 VGVENMHKDSKYVLFLDDDVRLHPGTIGA 193 (519)
Q Consensus 165 ~gl~~a~~~gd~vv~lDaD~~~~pd~L~~ 193 (519)
..++.. +-|+++..-=--.++++.|+.
T Consensus 76 ~~L~~~--~~Dlivlagy~~IL~~~~l~~ 102 (215)
T 3kcq_A 76 TVLREH--DVDLVCLAGFMSILPEKFVTD 102 (215)
T ss_dssp HHHHHT--TCSEEEESSCCSCCCHHHHHH
T ss_pred HHHHHh--CCCEEEEeCCceEeCHHHHhh
Confidence 566666 468888877777777776644
No 76
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=31.11 E-value=1.5e+02 Score=28.75 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=52.3
Q ss_pred EeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchhHHHHHHHHH
Q 010062 89 VMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQKIHNQLVGVE 168 (519)
Q Consensus 89 IIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K~~nl~~gl~ 168 (519)
++|+.|+.+.+..+++.+....-. -+++++.+... .+.+++...+.+ ..+++..+...+ -..++..+..
T Consensus 27 ll~l~g~~pli~~~l~~l~~~~~~--~~iivvt~~~~---~~~i~~~l~~~~---~~~ii~e~~~~g---ta~ai~~a~~ 95 (336)
T 2x65_A 27 FLKLFGNKSLMRWTFERVLEEMDP--KDVIVVTHKDY---VERTKKELPELP---DENIIAEPMKKN---TAPACFIGTK 95 (336)
T ss_dssp GCCCBTTBCHHHHHHHHHHTTCCG--GGEEEEEEGGG---HHHHHHHCTTSC---GGGEEEESSCCC---HHHHHHHHHT
T ss_pred EEECCCCCcHHHHHHHHHhccCCC--CcEEEEcChHH---HHHHHHHhhccc---cceEEeCCCCCC---cHHHHHHHHH
Confidence 457777788999999998875221 25555554321 222333222222 234444443332 3445555554
Q ss_pred hccCCCcEEEEEcCCCccC-hHHHHHHHH
Q 010062 169 NMHKDSKYVLFLDDDVRLH-PGTIGALTT 196 (519)
Q Consensus 169 ~a~~~gd~vv~lDaD~~~~-pd~L~~lv~ 196 (519)
... ..++++++.+|.... ++.+.++++
T Consensus 96 ~~~-~~~~~lvl~~D~~~~~~~~~~~~l~ 123 (336)
T 2x65_A 96 LAD-DDEPVLVLPADHRIPDTKKFWKTVK 123 (336)
T ss_dssp TSC-TTCEEEEEETTCBCCCHHHHHHHHH
T ss_pred hhC-CCCEEEEEcCCceeccHHHHHHHHH
Confidence 332 357899999999864 555444443
No 77
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=29.61 E-value=2.8e+02 Score=24.45 Aligned_cols=45 Identities=18% Similarity=0.241 Sum_probs=32.5
Q ss_pred ceEEEEcCCCCCcchhHHHHHHHHHhccCCCcEEEEEcCCCc-cChHHHHHHHH
Q 010062 144 DAKVVVAGLSTTCSQKIHNQLVGVENMHKDSKYVLFLDDDVR-LHPGTIGALTT 196 (519)
Q Consensus 144 ~v~vv~~~~~~~~~~K~~nl~~gl~~a~~~gd~vv~lDaD~~-~~pd~L~~lv~ 196 (519)
+++++..+ .+-..++..+++.. .+.++++-+|+- ++++.|+++++
T Consensus 66 ~~~~v~~~-----~gl~~sl~~a~~~~---~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 66 EARVLLDE-----KDLNEALNRYLKEA---EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp SSEEEECC-----SCHHHHHHHHHHHC---CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred CCEEEECC-----CCHHHHHHHHHHhc---CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 46676654 23455666677665 478889999996 68999999887
No 78
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=27.87 E-value=3.3e+02 Score=24.44 Aligned_cols=93 Identities=9% Similarity=0.023 Sum_probs=49.7
Q ss_pred EEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchh--HHHHHH
Q 010062 88 VVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQK--IHNQLV 165 (519)
Q Consensus 88 VIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K--~~nl~~ 165 (519)
|++-+-+....+..+|+.+.+..++ .|++.|.-+.+|.. +.+.++++ ++.++...+..-.+.. -..+..
T Consensus 4 I~vl~SG~g~~~~~~l~~l~~~~~~--~~i~~Vvs~~~~~~---~~~~A~~~----gIp~~~~~~~~~~~r~~~~~~~~~ 74 (216)
T 2ywr_A 4 IGVLVSGRGSNLQAIIDAIESGKVN--ASIELVISDNPKAY---AIERCKKH----NVECKVIQRKEFPSKKEFEERMAL 74 (216)
T ss_dssp EEEEECSCCHHHHHHHHHHHTTSSC--EEEEEEEESCTTCH---HHHHHHHH----TCCEEECCGGGSSSHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCC--CeEEEEEeCCCChH---HHHHHHHc----CCCEEEeCcccccchhhhhHHHHH
Confidence 4444557778889999998876553 68877776555543 23334443 3444432211111100 122334
Q ss_pred HHHhccCCCcEEEEEcCCCccChHHH
Q 010062 166 GVENMHKDSKYVLFLDDDVRLHPGTI 191 (519)
Q Consensus 166 gl~~a~~~gd~vv~lDaD~~~~pd~L 191 (519)
.++.. +-|+++..-=--.++++.|
T Consensus 75 ~l~~~--~~Dliv~a~y~~il~~~~l 98 (216)
T 2ywr_A 75 ELKKK--GVELVVLAGFMRILSHNFL 98 (216)
T ss_dssp HHHHT--TCCEEEESSCCSCCCHHHH
T ss_pred HHHhc--CCCEEEEeCchhhCCHHHH
Confidence 45544 4577766666566666554
No 79
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=27.26 E-value=1.4e+02 Score=27.19 Aligned_cols=41 Identities=17% Similarity=-0.050 Sum_probs=26.3
Q ss_pred hhHHHHHHHHHhccCCCcEEEEEcCCCccChHHHHHHHHHHHh
Q 010062 158 QKIHNQLVGVENMHKDSKYVLFLDDDVRLHPGTIGALTTEMEK 200 (519)
Q Consensus 158 ~K~~nl~~gl~~a~~~gd~vv~lDaD~~~~pd~L~~lv~~l~~ 200 (519)
+-.+++..+.+... ..|.++++.+|...+ .-+.++++.+.+
T Consensus 107 gt~~al~~a~~~~~-~~~~~lv~~~D~~~~-~~~~~~~~~~~~ 147 (259)
T 1tzf_A 107 MTGGRLKRVAEYVK-DDEAFLFTYGDGVAD-LDIKATIDFHKA 147 (259)
T ss_dssp CHHHHHHHTGGGTT-TSSCEEEEETTEEEC-CCHHHHHHHHHH
T ss_pred CcHHHHHHHHHhcC-CCCcEEEEECCEecc-cCHHHHHHHHHH
Confidence 34556666665542 246777888998654 457888887754
No 80
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=24.07 E-value=3.9e+02 Score=23.96 Aligned_cols=41 Identities=22% Similarity=0.218 Sum_probs=28.2
Q ss_pred cEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCc
Q 010062 85 RVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDP 127 (519)
Q Consensus 85 ~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~ 127 (519)
+.-|.|-+-+...++...++.+.+...+ .||+.|..+..|.
T Consensus 7 ~~ri~vl~SG~gsnl~all~~~~~~~l~--~~I~~Visn~~~a 47 (209)
T 4ds3_A 7 RNRVVIFISGGGSNMEALIRAAQAPGFP--AEIVAVFSDKAEA 47 (209)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHTSTTCS--EEEEEEEESCTTC
T ss_pred CccEEEEEECCcHHHHHHHHHHHcCCCC--cEEEEEEECCccc
Confidence 3456666677888899999988665553 7887776655443
No 81
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=23.32 E-value=4e+02 Score=23.82 Aligned_cols=93 Identities=10% Similarity=0.040 Sum_probs=48.8
Q ss_pred EEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCCCCCcchh--HHHHHH
Q 010062 88 VVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGLSTTCSQK--IHNQLV 165 (519)
Q Consensus 88 VIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~~~~~~~K--~~nl~~ 165 (519)
|.|-..+...++..+|+.+.+... +.||+.|.-+.+|.. +.+.++++ ++.++...+..-.+.. -..+..
T Consensus 6 i~vl~sG~g~~~~~~l~~l~~~~l--~~~I~~Vit~~~~~~---v~~~A~~~----gIp~~~~~~~~~~~~~~~~~~~~~ 76 (212)
T 3av3_A 6 LAVFASGSGTNFQAIVDAAKRGDL--PARVALLVCDRPGAK---VIERAARE----NVPAFVFSPKDYPSKAAFESEILR 76 (212)
T ss_dssp EEEECCSSCHHHHHHHHHHHTTCC--CEEEEEEEESSTTCH---HHHHHHHT----TCCEEECCGGGSSSHHHHHHHHHH
T ss_pred EEEEEECCcHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcH---HHHHHHHc----CCCEEEeCcccccchhhhHHHHHH
Confidence 455566777889999999887644 378876765544442 33344443 3444432221111110 112334
Q ss_pred HHHhccCCCcEEEEEcCCCccChHHH
Q 010062 166 GVENMHKDSKYVLFLDDDVRLHPGTI 191 (519)
Q Consensus 166 gl~~a~~~gd~vv~lDaD~~~~pd~L 191 (519)
.++.. +-|+++..-=--.++++.|
T Consensus 77 ~l~~~--~~Dliv~a~y~~il~~~~l 100 (212)
T 3av3_A 77 ELKGR--QIDWIALAGYMRLIGPTLL 100 (212)
T ss_dssp HHHHT--TCCEEEESSCCSCCCHHHH
T ss_pred HHHhc--CCCEEEEchhhhhCCHHHH
Confidence 44444 3466666554555666554
No 82
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=22.37 E-value=1.3e+02 Score=29.69 Aligned_cols=86 Identities=10% Similarity=0.033 Sum_probs=50.6
Q ss_pred eeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEEcCC-CCCcchhHHHHHHHHH
Q 010062 90 MPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVVAGL-STTCSQKIHNQLVGVE 168 (519)
Q Consensus 90 IP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~~~~-~~~~~~K~~nl~~gl~ 168 (519)
+|+. ..+.++.+++.+.+... -+++++.+.. +++...+... +++++..+. ..+.. .++.
T Consensus 26 l~i~-g~pli~~~l~~l~~~~~---~~i~vv~~~~-------i~~~~~~~~~--~i~~~~~~~~~~g~~-------~~l~ 85 (401)
T 2ggo_A 26 VPIL-SKPLIEYQIEYLRKCGI---RDITVIVSSK-------NKEYFEKKLK--EISIVTQKDDIKGTG-------AAIL 85 (401)
T ss_dssp CEET-TEEHHHHHHHHHHHTTC---CEEEEEECGG-------GHHHHHHHCT--TCEEEECCTTCCBST-------TTGG
T ss_pred eeEC-CEeHHHHHHHHHHHCCC---CEEEEEeCHH-------HHHHhhccCC--cEEEEeCCCCCCChH-------HHHH
Confidence 4444 45889999999987642 2676666543 2222222211 467766543 22221 2444
Q ss_pred hccCCCcEEEEEcCCCccC-hHHHHHHHH
Q 010062 169 NMHKDSKYVLFLDDDVRLH-PGTIGALTT 196 (519)
Q Consensus 169 ~a~~~gd~vv~lDaD~~~~-pd~L~~lv~ 196 (519)
.+.. .|.++++.+|.... ++.++++++
T Consensus 86 ~~~~-~~~~lv~~~D~~~~~~~~~~~l~~ 113 (401)
T 2ggo_A 86 SAKF-NDEALIIYGDLFFSNEKEICNIIT 113 (401)
T ss_dssp GCCC-SSEEEEEETTEEESCSHHHHHHTT
T ss_pred Hhcc-CCCEEEEeCccccccHHHHHHHHH
Confidence 4421 57888999999866 777877765
No 83
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=20.59 E-value=1e+02 Score=30.20 Aligned_cols=31 Identities=10% Similarity=-0.094 Sum_probs=22.4
Q ss_pred EEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEE
Q 010062 87 TVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVV 121 (519)
Q Consensus 87 SVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~ 121 (519)
.||+|+||.+. .+.-..++++-|| + |||=|+
T Consensus 281 ~VivP~fgd~~--D~~A~~~l~~~fP-~-~Vv~i~ 311 (330)
T 3hvm_A 281 ALIVPTYNDPK--DALILETLKQHTP-L-EVIGVD 311 (330)
T ss_dssp EEEEEECSCTT--HHHHHHHHHTTCS-S-EEEEEE
T ss_pred EEEEecCCChH--HHHHHHHHHHhCC-C-CEEEEE
Confidence 78999999764 3334456778899 7 887664
No 84
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=20.48 E-value=2.5e+02 Score=24.65 Aligned_cols=62 Identities=10% Similarity=-0.019 Sum_probs=38.4
Q ss_pred CCCcEEEEeeccCCchHHHHHHHHHHhccCCCCeEEEEEECCCCCcHHHHHHHHHhhcCCCCceEEEE
Q 010062 82 KLPRVTVVMPLKGFGEHNLLNWRSQVTSLYGGPLEFLFVVESKEDPAYHSVLRLLQEFKDDVDAKVVV 149 (519)
Q Consensus 82 ~~P~VSVIIP~~ne~~~L~~~L~Sl~~q~yp~~~eiIvV~d~s~D~t~~i~~~l~~~~~~~~~v~vv~ 149 (519)
..|+|.||+=-...-+..+++.+.+-...-| ||+-|+--+.+ .+.+.++.++...+ .+++++
T Consensus 11 ~~P~V~IimGS~SD~~v~~~a~~~l~~~gi~--~ev~V~saHR~---p~~l~~~~~~a~~~-g~~ViI 72 (173)
T 4grd_A 11 SAPLVGVLMGSSSDWDVMKHAVAILQEFGVP--YEAKVVSAHRM---PDEMFDYAEKARER-GLRAII 72 (173)
T ss_dssp SSCSEEEEESSGGGHHHHHHHHHHHHHTTCC--EEEEECCTTTS---HHHHHHHHHHHTTT-TCSEEE
T ss_pred CCCeEEEEeCcHhHHHHHHHHHHHHHHcCCC--EEEEEEccccC---HHHHHHHHHHHHhc-CCeEEE
Confidence 4688999988877777888887777665554 78765544433 34444554443332 455554
Done!